Multiple sequence alignment - TraesCS5A01G517400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G517400 chr5A 100.000 2435 0 0 1 2435 680280132 680282566 0.000000e+00 4497.0
1 TraesCS5A01G517400 chr5A 88.793 1044 69 27 426 1438 680273068 680274094 0.000000e+00 1236.0
2 TraesCS5A01G517400 chr5A 88.206 1009 79 22 478 1454 680325134 680326134 0.000000e+00 1168.0
3 TraesCS5A01G517400 chr5A 84.843 541 42 19 597 1106 680446974 680447505 2.160000e-140 508.0
4 TraesCS5A01G517400 chr5A 97.119 243 7 0 1099 1341 680458590 680458832 6.270000e-111 411.0
5 TraesCS5A01G517400 chr5A 86.184 304 31 8 1750 2048 439020847 439020550 3.910000e-83 318.0
6 TraesCS5A01G517400 chr5A 93.600 125 6 2 1336 1460 680464938 680465060 4.130000e-43 185.0
7 TraesCS5A01G517400 chr5A 85.437 103 14 1 310 412 615961900 615962001 3.310000e-19 106.0
8 TraesCS5A01G517400 chr5A 83.486 109 17 1 305 413 283305980 283306087 1.540000e-17 100.0
9 TraesCS5A01G517400 chr4B 90.087 1039 86 9 426 1454 642434509 642435540 0.000000e+00 1332.0
10 TraesCS5A01G517400 chr4B 91.946 745 45 4 1690 2430 117291296 117290563 0.000000e+00 1029.0
11 TraesCS5A01G517400 chr4D 90.342 994 68 15 478 1454 499478790 499479772 0.000000e+00 1279.0
12 TraesCS5A01G517400 chr4D 83.333 108 7 2 1577 1680 499479775 499479875 3.330000e-14 89.8
13 TraesCS5A01G517400 chr7D 94.695 754 37 3 1682 2434 607340133 607339382 0.000000e+00 1168.0
14 TraesCS5A01G517400 chr7D 87.446 231 29 0 1 231 253157918 253158148 1.440000e-67 267.0
15 TraesCS5A01G517400 chr4A 91.041 759 50 5 1682 2434 743944089 743944835 0.000000e+00 1009.0
16 TraesCS5A01G517400 chr7B 90.824 752 51 4 1690 2434 635676475 635675735 0.000000e+00 990.0
17 TraesCS5A01G517400 chr7B 82.115 766 73 24 1682 2434 543104420 543103706 4.480000e-167 597.0
18 TraesCS5A01G517400 chr7B 91.852 135 7 3 1445 1578 64780118 64780249 4.130000e-43 185.0
19 TraesCS5A01G517400 chr3B 86.857 700 62 16 1750 2434 678003396 678002712 0.000000e+00 756.0
20 TraesCS5A01G517400 chr3B 84.339 696 87 19 1750 2434 201228324 201229008 0.000000e+00 662.0
21 TraesCS5A01G517400 chr2D 86.080 625 59 16 1827 2434 489364564 489363951 0.000000e+00 647.0
22 TraesCS5A01G517400 chr2A 82.940 762 66 23 1682 2434 689814122 689814828 1.590000e-176 628.0
23 TraesCS5A01G517400 chr2A 86.813 91 10 2 323 412 770016787 770016876 1.540000e-17 100.0
24 TraesCS5A01G517400 chr1D 86.404 228 27 1 1 228 375982952 375983175 1.870000e-61 246.0
25 TraesCS5A01G517400 chr1D 89.116 147 13 3 1450 1593 178459642 178459496 1.920000e-41 180.0
26 TraesCS5A01G517400 chr1B 91.034 145 11 2 1453 1595 577672185 577672041 6.870000e-46 195.0
27 TraesCS5A01G517400 chr6B 92.481 133 9 1 1452 1583 18270633 18270501 3.200000e-44 189.0
28 TraesCS5A01G517400 chr6B 83.810 105 17 0 309 413 633912975 633912871 1.540000e-17 100.0
29 TraesCS5A01G517400 chr5D 90.141 142 12 2 1452 1591 386887301 386887160 1.490000e-42 183.0
30 TraesCS5A01G517400 chr5D 91.176 136 9 3 1462 1594 527907819 527907684 5.350000e-42 182.0
31 TraesCS5A01G517400 chrUn 89.655 145 12 3 1453 1594 263456365 263456509 5.350000e-42 182.0
32 TraesCS5A01G517400 chrUn 91.667 132 7 3 1453 1580 24321448 24321317 1.920000e-41 180.0
33 TraesCS5A01G517400 chrUn 89.189 148 10 5 1438 1580 24349039 24349185 1.920000e-41 180.0
34 TraesCS5A01G517400 chr6A 86.842 114 15 0 308 421 144266556 144266669 7.070000e-26 128.0
35 TraesCS5A01G517400 chr2B 87.500 96 11 1 317 412 680023211 680023117 2.560000e-20 110.0
36 TraesCS5A01G517400 chr3D 89.535 86 7 2 326 410 603650590 603650506 9.210000e-20 108.0
37 TraesCS5A01G517400 chr6D 84.906 106 14 2 308 412 115788329 115788433 3.310000e-19 106.0
38 TraesCS5A01G517400 chr5B 88.372 86 10 0 310 395 460658924 460659009 1.190000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G517400 chr5A 680280132 680282566 2434 False 4497.0 4497 100.0000 1 2435 1 chr5A.!!$F4 2434
1 TraesCS5A01G517400 chr5A 680273068 680274094 1026 False 1236.0 1236 88.7930 426 1438 1 chr5A.!!$F3 1012
2 TraesCS5A01G517400 chr5A 680325134 680326134 1000 False 1168.0 1168 88.2060 478 1454 1 chr5A.!!$F5 976
3 TraesCS5A01G517400 chr5A 680446974 680447505 531 False 508.0 508 84.8430 597 1106 1 chr5A.!!$F6 509
4 TraesCS5A01G517400 chr4B 642434509 642435540 1031 False 1332.0 1332 90.0870 426 1454 1 chr4B.!!$F1 1028
5 TraesCS5A01G517400 chr4B 117290563 117291296 733 True 1029.0 1029 91.9460 1690 2430 1 chr4B.!!$R1 740
6 TraesCS5A01G517400 chr4D 499478790 499479875 1085 False 684.4 1279 86.8375 478 1680 2 chr4D.!!$F1 1202
7 TraesCS5A01G517400 chr7D 607339382 607340133 751 True 1168.0 1168 94.6950 1682 2434 1 chr7D.!!$R1 752
8 TraesCS5A01G517400 chr4A 743944089 743944835 746 False 1009.0 1009 91.0410 1682 2434 1 chr4A.!!$F1 752
9 TraesCS5A01G517400 chr7B 635675735 635676475 740 True 990.0 990 90.8240 1690 2434 1 chr7B.!!$R2 744
10 TraesCS5A01G517400 chr7B 543103706 543104420 714 True 597.0 597 82.1150 1682 2434 1 chr7B.!!$R1 752
11 TraesCS5A01G517400 chr3B 678002712 678003396 684 True 756.0 756 86.8570 1750 2434 1 chr3B.!!$R1 684
12 TraesCS5A01G517400 chr3B 201228324 201229008 684 False 662.0 662 84.3390 1750 2434 1 chr3B.!!$F1 684
13 TraesCS5A01G517400 chr2D 489363951 489364564 613 True 647.0 647 86.0800 1827 2434 1 chr2D.!!$R1 607
14 TraesCS5A01G517400 chr2A 689814122 689814828 706 False 628.0 628 82.9400 1682 2434 1 chr2A.!!$F1 752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
154 155 0.032117 AGTGATCTGGGTCGGATCCA 60.032 55.0 13.41 10.11 43.45 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1560 1631 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.0 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.892425 GATCTCGCGGTTGGCTGG 60.892 66.667 6.13 0.00 40.44 4.85
18 19 3.371097 GATCTCGCGGTTGGCTGGA 62.371 63.158 6.13 0.00 40.44 3.86
19 20 2.852495 GATCTCGCGGTTGGCTGGAA 62.852 60.000 6.13 0.00 40.44 3.53
20 21 3.423154 CTCGCGGTTGGCTGGAAC 61.423 66.667 6.13 0.00 40.44 3.62
25 26 3.670377 GGTTGGCTGGAACCGCAC 61.670 66.667 9.06 1.83 36.28 5.34
26 27 2.904866 GTTGGCTGGAACCGCACA 60.905 61.111 9.06 3.75 0.00 4.57
27 28 2.594303 TTGGCTGGAACCGCACAG 60.594 61.111 9.06 0.00 37.76 3.66
28 29 3.113514 TTGGCTGGAACCGCACAGA 62.114 57.895 0.00 0.00 36.86 3.41
29 30 2.743928 GGCTGGAACCGCACAGAG 60.744 66.667 0.00 0.00 36.86 3.35
30 31 2.031163 GCTGGAACCGCACAGAGT 59.969 61.111 0.00 0.00 36.86 3.24
31 32 1.598130 GCTGGAACCGCACAGAGTT 60.598 57.895 0.00 0.00 36.86 3.01
32 33 1.166531 GCTGGAACCGCACAGAGTTT 61.167 55.000 0.00 0.00 36.86 2.66
33 34 0.868406 CTGGAACCGCACAGAGTTTC 59.132 55.000 0.00 0.00 36.86 2.78
34 35 0.179234 TGGAACCGCACAGAGTTTCA 59.821 50.000 0.00 0.00 0.00 2.69
35 36 0.586802 GGAACCGCACAGAGTTTCAC 59.413 55.000 0.00 0.00 0.00 3.18
36 37 0.586802 GAACCGCACAGAGTTTCACC 59.413 55.000 0.00 0.00 0.00 4.02
37 38 0.107410 AACCGCACAGAGTTTCACCA 60.107 50.000 0.00 0.00 0.00 4.17
38 39 0.108585 ACCGCACAGAGTTTCACCAT 59.891 50.000 0.00 0.00 0.00 3.55
39 40 0.518636 CCGCACAGAGTTTCACCATG 59.481 55.000 0.00 0.00 0.00 3.66
40 41 1.511850 CGCACAGAGTTTCACCATGA 58.488 50.000 0.00 0.00 0.00 3.07
41 42 1.872952 CGCACAGAGTTTCACCATGAA 59.127 47.619 0.00 0.00 34.03 2.57
42 43 2.096069 CGCACAGAGTTTCACCATGAAG 60.096 50.000 0.00 0.00 37.70 3.02
43 44 3.141398 GCACAGAGTTTCACCATGAAGA 58.859 45.455 0.00 0.00 37.70 2.87
44 45 3.058639 GCACAGAGTTTCACCATGAAGAC 60.059 47.826 0.00 0.00 37.70 3.01
45 46 3.185188 CACAGAGTTTCACCATGAAGACG 59.815 47.826 0.00 0.00 37.70 4.18
46 47 3.181465 ACAGAGTTTCACCATGAAGACGT 60.181 43.478 0.00 0.00 37.70 4.34
47 48 4.038763 ACAGAGTTTCACCATGAAGACGTA 59.961 41.667 0.00 0.00 37.70 3.57
48 49 5.171476 CAGAGTTTCACCATGAAGACGTAT 58.829 41.667 0.00 0.00 37.70 3.06
49 50 5.062683 CAGAGTTTCACCATGAAGACGTATG 59.937 44.000 0.00 0.00 37.70 2.39
50 51 4.894784 AGTTTCACCATGAAGACGTATGT 58.105 39.130 0.00 0.00 37.70 2.29
51 52 4.929808 AGTTTCACCATGAAGACGTATGTC 59.070 41.667 7.01 7.01 45.86 3.06
59 60 2.954868 GACGTATGTCGCCGCCAG 60.955 66.667 0.00 0.00 44.19 4.85
60 61 3.695022 GACGTATGTCGCCGCCAGT 62.695 63.158 0.00 0.00 44.19 4.00
61 62 2.327002 GACGTATGTCGCCGCCAGTA 62.327 60.000 0.00 0.00 44.19 2.74
62 63 1.942712 CGTATGTCGCCGCCAGTAC 60.943 63.158 0.00 0.00 0.00 2.73
63 64 1.436336 GTATGTCGCCGCCAGTACT 59.564 57.895 0.00 0.00 0.00 2.73
64 65 0.594284 GTATGTCGCCGCCAGTACTC 60.594 60.000 0.00 0.00 0.00 2.59
65 66 1.731433 TATGTCGCCGCCAGTACTCC 61.731 60.000 0.00 0.00 0.00 3.85
66 67 4.849329 GTCGCCGCCAGTACTCCG 62.849 72.222 0.00 0.00 0.00 4.63
89 90 3.483808 GGAGATCTTCCATCCCTTCAC 57.516 52.381 0.00 0.00 46.01 3.18
90 91 2.105649 GGAGATCTTCCATCCCTTCACC 59.894 54.545 0.00 0.00 46.01 4.02
91 92 1.765314 AGATCTTCCATCCCTTCACCG 59.235 52.381 0.00 0.00 0.00 4.94
92 93 0.839946 ATCTTCCATCCCTTCACCGG 59.160 55.000 0.00 0.00 0.00 5.28
93 94 0.252513 TCTTCCATCCCTTCACCGGA 60.253 55.000 9.46 0.00 0.00 5.14
94 95 0.179000 CTTCCATCCCTTCACCGGAG 59.821 60.000 9.46 0.00 31.41 4.63
95 96 1.910580 TTCCATCCCTTCACCGGAGC 61.911 60.000 9.46 0.00 31.41 4.70
96 97 2.190578 CATCCCTTCACCGGAGCC 59.809 66.667 9.46 0.00 31.41 4.70
97 98 3.090532 ATCCCTTCACCGGAGCCC 61.091 66.667 9.46 0.00 31.41 5.19
98 99 3.642741 ATCCCTTCACCGGAGCCCT 62.643 63.158 9.46 0.00 31.41 5.19
99 100 3.787001 CCCTTCACCGGAGCCCTC 61.787 72.222 9.46 0.00 0.00 4.30
100 101 3.003173 CCTTCACCGGAGCCCTCA 61.003 66.667 9.46 0.00 0.00 3.86
101 102 2.370445 CCTTCACCGGAGCCCTCAT 61.370 63.158 9.46 0.00 0.00 2.90
102 103 1.144936 CTTCACCGGAGCCCTCATC 59.855 63.158 9.46 0.00 0.00 2.92
103 104 1.306141 TTCACCGGAGCCCTCATCT 60.306 57.895 9.46 0.00 0.00 2.90
104 105 1.330655 TTCACCGGAGCCCTCATCTC 61.331 60.000 9.46 0.00 0.00 2.75
105 106 2.835431 ACCGGAGCCCTCATCTCG 60.835 66.667 9.46 0.00 0.00 4.04
106 107 4.292178 CCGGAGCCCTCATCTCGC 62.292 72.222 0.00 0.00 0.00 5.03
107 108 4.292178 CGGAGCCCTCATCTCGCC 62.292 72.222 0.00 0.00 0.00 5.54
108 109 4.292178 GGAGCCCTCATCTCGCCG 62.292 72.222 0.00 0.00 0.00 6.46
109 110 4.959596 GAGCCCTCATCTCGCCGC 62.960 72.222 0.00 0.00 0.00 6.53
113 114 4.933064 CCTCATCTCGCCGCCGAC 62.933 72.222 0.00 0.00 38.82 4.79
114 115 4.933064 CTCATCTCGCCGCCGACC 62.933 72.222 0.00 0.00 38.82 4.79
116 117 4.592192 CATCTCGCCGCCGACCAT 62.592 66.667 0.00 0.00 38.82 3.55
117 118 4.286320 ATCTCGCCGCCGACCATC 62.286 66.667 0.00 0.00 38.82 3.51
122 123 4.856801 GCCGCCGACCATCCATGT 62.857 66.667 0.00 0.00 0.00 3.21
123 124 2.896854 CCGCCGACCATCCATGTG 60.897 66.667 0.00 0.00 0.00 3.21
124 125 2.186644 CGCCGACCATCCATGTGA 59.813 61.111 0.00 0.00 0.00 3.58
125 126 1.449423 CGCCGACCATCCATGTGAA 60.449 57.895 0.00 0.00 0.00 3.18
126 127 1.431488 CGCCGACCATCCATGTGAAG 61.431 60.000 0.00 0.00 0.00 3.02
127 128 0.107703 GCCGACCATCCATGTGAAGA 60.108 55.000 0.00 0.00 0.00 2.87
128 129 1.678728 GCCGACCATCCATGTGAAGAA 60.679 52.381 0.00 0.00 0.00 2.52
129 130 2.923121 CCGACCATCCATGTGAAGAAT 58.077 47.619 0.00 0.00 0.00 2.40
130 131 2.874701 CCGACCATCCATGTGAAGAATC 59.125 50.000 0.00 0.00 0.00 2.52
131 132 2.541346 CGACCATCCATGTGAAGAATCG 59.459 50.000 0.00 0.00 0.00 3.34
132 133 3.737972 CGACCATCCATGTGAAGAATCGA 60.738 47.826 0.00 0.00 0.00 3.59
133 134 3.535561 ACCATCCATGTGAAGAATCGAC 58.464 45.455 0.00 0.00 0.00 4.20
134 135 2.541346 CCATCCATGTGAAGAATCGACG 59.459 50.000 0.00 0.00 0.00 5.12
135 136 3.447742 CATCCATGTGAAGAATCGACGA 58.552 45.455 0.00 0.00 0.00 4.20
136 137 3.150848 TCCATGTGAAGAATCGACGAG 57.849 47.619 3.01 0.00 0.00 4.18
137 138 2.492088 TCCATGTGAAGAATCGACGAGT 59.508 45.455 3.01 0.00 0.00 4.18
138 139 2.600420 CCATGTGAAGAATCGACGAGTG 59.400 50.000 0.98 0.00 0.00 3.51
139 140 3.501950 CATGTGAAGAATCGACGAGTGA 58.498 45.455 0.98 0.00 0.00 3.41
140 141 3.850122 TGTGAAGAATCGACGAGTGAT 57.150 42.857 0.98 0.00 0.00 3.06
141 142 3.759418 TGTGAAGAATCGACGAGTGATC 58.241 45.455 0.98 1.16 0.00 2.92
142 143 3.440522 TGTGAAGAATCGACGAGTGATCT 59.559 43.478 0.98 0.96 0.00 2.75
143 144 3.788694 GTGAAGAATCGACGAGTGATCTG 59.211 47.826 0.98 0.00 0.00 2.90
144 145 3.181496 TGAAGAATCGACGAGTGATCTGG 60.181 47.826 0.98 0.00 0.00 3.86
145 146 1.678627 AGAATCGACGAGTGATCTGGG 59.321 52.381 0.98 0.00 0.00 4.45
146 147 1.405821 GAATCGACGAGTGATCTGGGT 59.594 52.381 0.98 0.00 0.00 4.51
147 148 1.025812 ATCGACGAGTGATCTGGGTC 58.974 55.000 3.01 0.00 0.00 4.46
148 149 1.062685 CGACGAGTGATCTGGGTCG 59.937 63.158 12.25 12.25 39.23 4.79
149 150 1.433879 GACGAGTGATCTGGGTCGG 59.566 63.158 0.00 0.00 36.74 4.79
150 151 1.001269 ACGAGTGATCTGGGTCGGA 60.001 57.895 0.00 0.00 36.74 4.55
151 152 0.395862 ACGAGTGATCTGGGTCGGAT 60.396 55.000 0.00 0.00 36.74 4.18
152 153 0.312416 CGAGTGATCTGGGTCGGATC 59.688 60.000 9.19 9.19 44.12 3.36
153 154 0.676736 GAGTGATCTGGGTCGGATCC 59.323 60.000 0.00 0.00 43.45 3.36
154 155 0.032117 AGTGATCTGGGTCGGATCCA 60.032 55.000 13.41 10.11 43.45 3.41
165 166 2.427753 GGATCCAGATCCGTGGCC 59.572 66.667 10.84 0.00 46.84 5.36
166 167 2.029666 GATCCAGATCCGTGGCCG 59.970 66.667 0.00 0.00 37.53 6.13
167 168 4.241555 ATCCAGATCCGTGGCCGC 62.242 66.667 6.11 6.11 37.53 6.53
184 185 3.840594 CCGCCATGCCCACCATTG 61.841 66.667 0.00 0.00 29.71 2.82
185 186 4.517815 CGCCATGCCCACCATTGC 62.518 66.667 0.00 0.00 38.77 3.56
186 187 4.165486 GCCATGCCCACCATTGCC 62.165 66.667 0.00 0.00 36.78 4.52
187 188 2.684294 CCATGCCCACCATTGCCA 60.684 61.111 0.00 0.00 29.71 4.92
188 189 2.727392 CCATGCCCACCATTGCCAG 61.727 63.158 0.00 0.00 29.71 4.85
189 190 3.078836 ATGCCCACCATTGCCAGC 61.079 61.111 0.00 0.00 0.00 4.85
190 191 3.908904 ATGCCCACCATTGCCAGCA 62.909 57.895 0.00 0.00 34.28 4.41
191 192 3.078836 GCCCACCATTGCCAGCAT 61.079 61.111 0.00 0.00 0.00 3.79
192 193 3.085119 GCCCACCATTGCCAGCATC 62.085 63.158 0.00 0.00 0.00 3.91
193 194 1.683025 CCCACCATTGCCAGCATCA 60.683 57.895 0.00 0.00 0.00 3.07
194 195 1.514087 CCACCATTGCCAGCATCAC 59.486 57.895 0.00 0.00 0.00 3.06
195 196 1.514087 CACCATTGCCAGCATCACC 59.486 57.895 0.00 0.00 0.00 4.02
196 197 1.077086 ACCATTGCCAGCATCACCA 59.923 52.632 0.00 0.00 0.00 4.17
197 198 0.968901 ACCATTGCCAGCATCACCAG 60.969 55.000 0.00 0.00 0.00 4.00
198 199 1.141019 CATTGCCAGCATCACCAGC 59.859 57.895 0.00 0.00 0.00 4.85
199 200 2.056223 ATTGCCAGCATCACCAGCC 61.056 57.895 0.00 0.00 0.00 4.85
200 201 2.791613 ATTGCCAGCATCACCAGCCA 62.792 55.000 0.00 0.00 0.00 4.75
201 202 2.441532 GCCAGCATCACCAGCCAT 60.442 61.111 0.00 0.00 0.00 4.40
202 203 2.782222 GCCAGCATCACCAGCCATG 61.782 63.158 0.00 0.00 0.00 3.66
212 213 3.895025 CAGCCATGGAGTCGTTGG 58.105 61.111 18.40 5.77 0.00 3.77
213 214 1.003355 CAGCCATGGAGTCGTTGGT 60.003 57.895 18.40 0.00 0.00 3.67
214 215 0.606401 CAGCCATGGAGTCGTTGGTT 60.606 55.000 18.40 3.34 0.00 3.67
215 216 0.606401 AGCCATGGAGTCGTTGGTTG 60.606 55.000 18.40 0.00 0.00 3.77
216 217 0.889186 GCCATGGAGTCGTTGGTTGT 60.889 55.000 18.40 0.00 0.00 3.32
217 218 1.156736 CCATGGAGTCGTTGGTTGTC 58.843 55.000 5.56 0.00 0.00 3.18
218 219 0.790207 CATGGAGTCGTTGGTTGTCG 59.210 55.000 0.00 0.00 0.00 4.35
219 220 0.391597 ATGGAGTCGTTGGTTGTCGT 59.608 50.000 0.00 0.00 0.00 4.34
220 221 0.249155 TGGAGTCGTTGGTTGTCGTC 60.249 55.000 0.00 0.00 0.00 4.20
221 222 1.273455 GGAGTCGTTGGTTGTCGTCG 61.273 60.000 0.00 0.00 0.00 5.12
222 223 1.873355 GAGTCGTTGGTTGTCGTCGC 61.873 60.000 0.00 0.00 0.00 5.19
223 224 2.104530 TCGTTGGTTGTCGTCGCA 59.895 55.556 0.00 0.00 0.00 5.10
224 225 2.232296 TCGTTGGTTGTCGTCGCAC 61.232 57.895 0.00 0.00 0.00 5.34
225 226 2.244382 GTTGGTTGTCGTCGCACG 59.756 61.111 2.79 2.79 44.19 5.34
226 227 2.962786 TTGGTTGTCGTCGCACGG 60.963 61.111 8.46 0.00 42.81 4.94
239 240 3.129502 CACGGCCAGCCATGTGAG 61.130 66.667 9.78 0.00 31.80 3.51
240 241 3.321648 ACGGCCAGCCATGTGAGA 61.322 61.111 9.78 0.00 35.37 3.27
241 242 2.191375 CGGCCAGCCATGTGAGAT 59.809 61.111 9.78 0.00 35.37 2.75
242 243 1.890979 CGGCCAGCCATGTGAGATC 60.891 63.158 9.78 0.00 35.37 2.75
243 244 1.530771 GGCCAGCCATGTGAGATCT 59.469 57.895 3.12 0.00 35.81 2.75
244 245 0.106819 GGCCAGCCATGTGAGATCTT 60.107 55.000 3.12 0.00 35.81 2.40
245 246 1.022735 GCCAGCCATGTGAGATCTTG 58.977 55.000 0.00 0.00 0.00 3.02
246 247 1.681166 GCCAGCCATGTGAGATCTTGT 60.681 52.381 0.00 0.00 0.00 3.16
247 248 2.014857 CCAGCCATGTGAGATCTTGTG 58.985 52.381 0.00 0.00 0.00 3.33
248 249 2.014857 CAGCCATGTGAGATCTTGTGG 58.985 52.381 0.00 4.58 0.00 4.17
249 250 1.064906 AGCCATGTGAGATCTTGTGGG 60.065 52.381 14.53 7.53 0.00 4.61
250 251 1.340405 GCCATGTGAGATCTTGTGGGT 60.340 52.381 14.53 0.00 0.00 4.51
251 252 2.362736 CCATGTGAGATCTTGTGGGTG 58.637 52.381 0.00 0.00 0.00 4.61
252 253 2.026915 CCATGTGAGATCTTGTGGGTGA 60.027 50.000 0.00 0.00 0.00 4.02
253 254 3.559811 CCATGTGAGATCTTGTGGGTGAA 60.560 47.826 0.00 0.00 0.00 3.18
254 255 4.267536 CATGTGAGATCTTGTGGGTGAAT 58.732 43.478 0.00 0.00 0.00 2.57
255 256 3.942829 TGTGAGATCTTGTGGGTGAATC 58.057 45.455 0.00 0.00 0.00 2.52
256 257 3.274288 GTGAGATCTTGTGGGTGAATCC 58.726 50.000 0.00 0.00 0.00 3.01
257 258 2.912295 TGAGATCTTGTGGGTGAATCCA 59.088 45.455 0.00 0.00 38.11 3.41
258 259 3.330405 TGAGATCTTGTGGGTGAATCCAA 59.670 43.478 0.00 0.00 38.72 3.53
259 260 3.690460 AGATCTTGTGGGTGAATCCAAC 58.310 45.455 0.00 0.00 40.50 3.77
263 264 1.698506 TGTGGGTGAATCCAACAACC 58.301 50.000 0.00 0.00 46.25 3.77
264 265 0.966179 GTGGGTGAATCCAACAACCC 59.034 55.000 2.66 2.66 43.71 4.11
265 266 0.178947 TGGGTGAATCCAACAACCCC 60.179 55.000 7.24 0.00 43.71 4.95
266 267 0.902984 GGGTGAATCCAACAACCCCC 60.903 60.000 0.00 0.00 39.00 5.40
267 268 0.114364 GGTGAATCCAACAACCCCCT 59.886 55.000 0.00 0.00 35.97 4.79
268 269 1.545841 GTGAATCCAACAACCCCCTC 58.454 55.000 0.00 0.00 0.00 4.30
269 270 1.075536 GTGAATCCAACAACCCCCTCT 59.924 52.381 0.00 0.00 0.00 3.69
270 271 2.307686 GTGAATCCAACAACCCCCTCTA 59.692 50.000 0.00 0.00 0.00 2.43
271 272 2.990284 TGAATCCAACAACCCCCTCTAA 59.010 45.455 0.00 0.00 0.00 2.10
272 273 3.399644 TGAATCCAACAACCCCCTCTAAA 59.600 43.478 0.00 0.00 0.00 1.85
273 274 2.963599 TCCAACAACCCCCTCTAAAC 57.036 50.000 0.00 0.00 0.00 2.01
274 275 1.072648 TCCAACAACCCCCTCTAAACG 59.927 52.381 0.00 0.00 0.00 3.60
275 276 1.530323 CAACAACCCCCTCTAAACGG 58.470 55.000 0.00 0.00 0.00 4.44
276 277 0.402887 AACAACCCCCTCTAAACGGG 59.597 55.000 0.00 0.00 43.05 5.28
282 283 2.927028 CCCCCTCTAAACGGGTATTTG 58.073 52.381 0.00 0.00 40.24 2.32
283 284 2.506644 CCCCCTCTAAACGGGTATTTGA 59.493 50.000 0.00 0.00 40.24 2.69
284 285 3.137728 CCCCCTCTAAACGGGTATTTGAT 59.862 47.826 0.00 0.00 40.24 2.57
285 286 4.386711 CCCCTCTAAACGGGTATTTGATC 58.613 47.826 0.00 0.00 40.24 2.92
286 287 4.386711 CCCTCTAAACGGGTATTTGATCC 58.613 47.826 0.00 0.00 36.91 3.36
287 288 4.141574 CCCTCTAAACGGGTATTTGATCCA 60.142 45.833 0.00 0.00 36.91 3.41
288 289 5.433526 CCTCTAAACGGGTATTTGATCCAA 58.566 41.667 0.00 0.00 0.00 3.53
289 290 5.296035 CCTCTAAACGGGTATTTGATCCAAC 59.704 44.000 0.00 0.00 0.00 3.77
290 291 6.057321 TCTAAACGGGTATTTGATCCAACT 57.943 37.500 0.00 0.00 0.00 3.16
291 292 6.478129 TCTAAACGGGTATTTGATCCAACTT 58.522 36.000 0.00 0.00 0.00 2.66
292 293 7.622713 TCTAAACGGGTATTTGATCCAACTTA 58.377 34.615 0.00 0.00 0.00 2.24
293 294 8.102047 TCTAAACGGGTATTTGATCCAACTTAA 58.898 33.333 0.00 0.00 0.00 1.85
294 295 6.753107 AACGGGTATTTGATCCAACTTAAG 57.247 37.500 0.00 0.00 0.00 1.85
295 296 5.190677 ACGGGTATTTGATCCAACTTAAGG 58.809 41.667 7.53 0.00 0.00 2.69
296 297 4.578928 CGGGTATTTGATCCAACTTAAGGG 59.421 45.833 7.53 0.00 0.00 3.95
297 298 4.893524 GGGTATTTGATCCAACTTAAGGGG 59.106 45.833 7.53 8.20 0.00 4.79
298 299 5.340528 GGGTATTTGATCCAACTTAAGGGGA 60.341 44.000 17.37 17.37 34.70 4.81
299 300 5.828328 GGTATTTGATCCAACTTAAGGGGAG 59.172 44.000 19.13 2.01 33.47 4.30
300 301 4.316025 TTTGATCCAACTTAAGGGGAGG 57.684 45.455 19.13 10.18 33.47 4.30
301 302 3.214694 TGATCCAACTTAAGGGGAGGA 57.785 47.619 19.13 14.21 33.47 3.71
302 303 3.747852 TGATCCAACTTAAGGGGAGGAT 58.252 45.455 19.13 17.34 38.50 3.24
303 304 4.119155 TGATCCAACTTAAGGGGAGGATT 58.881 43.478 19.13 6.63 36.09 3.01
304 305 4.079787 TGATCCAACTTAAGGGGAGGATTG 60.080 45.833 19.13 8.08 36.09 2.67
305 306 3.537337 TCCAACTTAAGGGGAGGATTGA 58.463 45.455 12.62 0.00 0.00 2.57
306 307 3.920197 TCCAACTTAAGGGGAGGATTGAA 59.080 43.478 12.62 0.00 0.00 2.69
307 308 4.355588 TCCAACTTAAGGGGAGGATTGAAA 59.644 41.667 12.62 0.00 0.00 2.69
308 309 5.083821 CCAACTTAAGGGGAGGATTGAAAA 58.916 41.667 7.53 0.00 0.00 2.29
309 310 5.721480 CCAACTTAAGGGGAGGATTGAAAAT 59.279 40.000 7.53 0.00 0.00 1.82
310 311 6.895204 CCAACTTAAGGGGAGGATTGAAAATA 59.105 38.462 7.53 0.00 0.00 1.40
311 312 7.147897 CCAACTTAAGGGGAGGATTGAAAATAC 60.148 40.741 7.53 0.00 0.00 1.89
312 313 7.039722 ACTTAAGGGGAGGATTGAAAATACA 57.960 36.000 7.53 0.00 0.00 2.29
313 314 6.890268 ACTTAAGGGGAGGATTGAAAATACAC 59.110 38.462 7.53 0.00 0.00 2.90
314 315 4.251103 AGGGGAGGATTGAAAATACACC 57.749 45.455 0.00 0.00 0.00 4.16
315 316 3.596046 AGGGGAGGATTGAAAATACACCA 59.404 43.478 1.79 0.00 0.00 4.17
316 317 4.232820 AGGGGAGGATTGAAAATACACCAT 59.767 41.667 1.79 0.00 0.00 3.55
317 318 4.584743 GGGGAGGATTGAAAATACACCATC 59.415 45.833 1.79 0.00 0.00 3.51
318 319 4.584743 GGGAGGATTGAAAATACACCATCC 59.415 45.833 1.79 0.00 31.19 3.51
319 320 4.275936 GGAGGATTGAAAATACACCATCCG 59.724 45.833 0.00 0.00 34.33 4.18
320 321 4.855340 AGGATTGAAAATACACCATCCGT 58.145 39.130 0.00 0.00 34.33 4.69
321 322 4.881850 AGGATTGAAAATACACCATCCGTC 59.118 41.667 0.00 0.00 34.33 4.79
322 323 4.036380 GGATTGAAAATACACCATCCGTCC 59.964 45.833 0.00 0.00 0.00 4.79
323 324 2.993937 TGAAAATACACCATCCGTCCC 58.006 47.619 0.00 0.00 0.00 4.46
324 325 2.306219 TGAAAATACACCATCCGTCCCA 59.694 45.455 0.00 0.00 0.00 4.37
325 326 3.244946 TGAAAATACACCATCCGTCCCAA 60.245 43.478 0.00 0.00 0.00 4.12
326 327 3.443145 AAATACACCATCCGTCCCAAA 57.557 42.857 0.00 0.00 0.00 3.28
327 328 3.662759 AATACACCATCCGTCCCAAAT 57.337 42.857 0.00 0.00 0.00 2.32
328 329 3.662759 ATACACCATCCGTCCCAAATT 57.337 42.857 0.00 0.00 0.00 1.82
329 330 4.781775 ATACACCATCCGTCCCAAATTA 57.218 40.909 0.00 0.00 0.00 1.40
330 331 2.718563 ACACCATCCGTCCCAAATTAC 58.281 47.619 0.00 0.00 0.00 1.89
331 332 2.307686 ACACCATCCGTCCCAAATTACT 59.692 45.455 0.00 0.00 0.00 2.24
332 333 3.245122 ACACCATCCGTCCCAAATTACTT 60.245 43.478 0.00 0.00 0.00 2.24
333 334 4.019141 ACACCATCCGTCCCAAATTACTTA 60.019 41.667 0.00 0.00 0.00 2.24
334 335 5.130350 CACCATCCGTCCCAAATTACTTAT 58.870 41.667 0.00 0.00 0.00 1.73
335 336 5.238650 CACCATCCGTCCCAAATTACTTATC 59.761 44.000 0.00 0.00 0.00 1.75
336 337 4.451096 CCATCCGTCCCAAATTACTTATCG 59.549 45.833 0.00 0.00 0.00 2.92
337 338 4.741321 TCCGTCCCAAATTACTTATCGT 57.259 40.909 0.00 0.00 0.00 3.73
338 339 5.850557 TCCGTCCCAAATTACTTATCGTA 57.149 39.130 0.00 0.00 0.00 3.43
339 340 6.219417 TCCGTCCCAAATTACTTATCGTAA 57.781 37.500 0.00 0.00 41.97 3.18
340 341 6.638610 TCCGTCCCAAATTACTTATCGTAAA 58.361 36.000 0.00 0.00 41.17 2.01
341 342 7.102346 TCCGTCCCAAATTACTTATCGTAAAA 58.898 34.615 0.00 0.00 41.17 1.52
342 343 7.605691 TCCGTCCCAAATTACTTATCGTAAAAA 59.394 33.333 0.00 0.00 41.17 1.94
343 344 8.400186 CCGTCCCAAATTACTTATCGTAAAAAT 58.600 33.333 0.00 0.00 41.17 1.82
344 345 9.217223 CGTCCCAAATTACTTATCGTAAAAATG 57.783 33.333 0.00 0.00 41.17 2.32
345 346 9.511144 GTCCCAAATTACTTATCGTAAAAATGG 57.489 33.333 0.00 0.00 41.17 3.16
346 347 9.463902 TCCCAAATTACTTATCGTAAAAATGGA 57.536 29.630 11.90 0.00 41.17 3.41
355 356 8.342634 ACTTATCGTAAAAATGGATCGAAATGG 58.657 33.333 0.00 0.00 34.38 3.16
356 357 6.935741 ATCGTAAAAATGGATCGAAATGGA 57.064 33.333 0.00 0.00 34.38 3.41
357 358 6.935741 TCGTAAAAATGGATCGAAATGGAT 57.064 33.333 0.00 0.00 0.00 3.41
358 359 6.724263 TCGTAAAAATGGATCGAAATGGATG 58.276 36.000 0.00 0.00 0.00 3.51
359 360 6.317642 TCGTAAAAATGGATCGAAATGGATGT 59.682 34.615 0.00 0.00 0.00 3.06
360 361 7.496263 TCGTAAAAATGGATCGAAATGGATGTA 59.504 33.333 0.00 0.00 0.00 2.29
361 362 8.289618 CGTAAAAATGGATCGAAATGGATGTAT 58.710 33.333 0.00 0.00 0.00 2.29
362 363 9.612620 GTAAAAATGGATCGAAATGGATGTATC 57.387 33.333 0.00 0.00 0.00 2.24
363 364 8.469309 AAAAATGGATCGAAATGGATGTATCT 57.531 30.769 0.00 0.00 0.00 1.98
364 365 9.573166 AAAAATGGATCGAAATGGATGTATCTA 57.427 29.630 0.00 0.00 0.00 1.98
365 366 9.573166 AAAATGGATCGAAATGGATGTATCTAA 57.427 29.630 0.00 0.00 0.00 2.10
366 367 9.573166 AAATGGATCGAAATGGATGTATCTAAA 57.427 29.630 0.00 0.00 0.00 1.85
367 368 9.573166 AATGGATCGAAATGGATGTATCTAAAA 57.427 29.630 0.00 0.00 0.00 1.52
368 369 8.378172 TGGATCGAAATGGATGTATCTAAAAC 57.622 34.615 0.00 0.00 0.00 2.43
369 370 8.210946 TGGATCGAAATGGATGTATCTAAAACT 58.789 33.333 0.00 0.00 0.00 2.66
370 371 9.706691 GGATCGAAATGGATGTATCTAAAACTA 57.293 33.333 0.00 0.00 0.00 2.24
415 416 9.104965 TCCATTTATTAGACAAGTAATTCGTGG 57.895 33.333 0.00 0.00 0.00 4.94
416 417 7.855904 CCATTTATTAGACAAGTAATTCGTGGC 59.144 37.037 0.00 0.00 33.78 5.01
417 418 7.908827 TTTATTAGACAAGTAATTCGTGGCA 57.091 32.000 0.00 0.00 36.02 4.92
418 419 7.534085 TTATTAGACAAGTAATTCGTGGCAG 57.466 36.000 0.00 0.00 36.02 4.85
419 420 3.678056 AGACAAGTAATTCGTGGCAGA 57.322 42.857 0.00 0.00 36.02 4.26
420 421 3.589988 AGACAAGTAATTCGTGGCAGAG 58.410 45.455 0.00 0.00 36.02 3.35
421 422 3.006967 AGACAAGTAATTCGTGGCAGAGT 59.993 43.478 0.00 0.00 36.02 3.24
422 423 3.740115 ACAAGTAATTCGTGGCAGAGTT 58.260 40.909 0.00 0.00 0.00 3.01
423 424 4.890088 ACAAGTAATTCGTGGCAGAGTTA 58.110 39.130 0.00 0.00 0.00 2.24
424 425 4.929808 ACAAGTAATTCGTGGCAGAGTTAG 59.070 41.667 0.00 0.00 0.00 2.34
437 438 7.490079 CGTGGCAGAGTTAGTACATAATTAACA 59.510 37.037 0.00 0.00 31.38 2.41
543 551 9.392506 TGTTCCAAATAGAGATATAATCCCTCA 57.607 33.333 0.00 0.00 0.00 3.86
669 685 1.143073 ACCCTTTCTGGACTTGGTCAC 59.857 52.381 0.14 0.00 38.35 3.67
727 744 3.932822 TCACCACTTAAGCGCTCAAATA 58.067 40.909 12.06 0.00 0.00 1.40
741 758 5.220662 GCGCTCAAATAAAAGCTCACATCTA 60.221 40.000 0.00 0.00 36.35 1.98
749 766 7.706281 ATAAAAGCTCACATCTATTGACGAG 57.294 36.000 0.00 0.00 33.96 4.18
802 826 8.723942 ACATATTGACATTCCACTCTAGAAAC 57.276 34.615 0.00 0.00 0.00 2.78
823 847 2.613977 CCACCAACCTGTAGCTCTCAAG 60.614 54.545 0.00 0.00 0.00 3.02
874 923 5.921004 ATATTGAAGCTTTCTCGCATCTC 57.079 39.130 0.00 0.00 0.00 2.75
967 1027 4.002982 TCCCATTTCACAAGATCGTCAAG 58.997 43.478 0.00 0.00 0.00 3.02
975 1035 0.732880 AAGATCGTCAAGACCGCGTG 60.733 55.000 4.92 0.00 0.00 5.34
1022 1084 1.519455 CATCCCAAGCCGTCGAGAC 60.519 63.158 0.00 0.00 0.00 3.36
1454 1525 9.587772 AGAATGAGTAACTGTGTTGTGATATAC 57.412 33.333 0.00 0.00 0.00 1.47
1455 1526 9.587772 GAATGAGTAACTGTGTTGTGATATACT 57.412 33.333 0.00 0.00 0.00 2.12
1456 1527 9.587772 AATGAGTAACTGTGTTGTGATATACTC 57.412 33.333 0.00 0.00 38.82 2.59
1457 1528 7.544622 TGAGTAACTGTGTTGTGATATACTCC 58.455 38.462 0.00 0.00 38.01 3.85
1458 1529 7.396339 TGAGTAACTGTGTTGTGATATACTCCT 59.604 37.037 0.00 0.00 38.01 3.69
1459 1530 8.818622 AGTAACTGTGTTGTGATATACTCCTA 57.181 34.615 0.00 0.00 0.00 2.94
1460 1531 9.422681 AGTAACTGTGTTGTGATATACTCCTAT 57.577 33.333 0.00 0.00 0.00 2.57
1461 1532 9.680315 GTAACTGTGTTGTGATATACTCCTATC 57.320 37.037 0.00 0.00 0.00 2.08
1462 1533 6.971602 ACTGTGTTGTGATATACTCCTATCG 58.028 40.000 0.00 0.00 31.89 2.92
1463 1534 6.546403 ACTGTGTTGTGATATACTCCTATCGT 59.454 38.462 0.00 0.00 31.89 3.73
1464 1535 7.068348 ACTGTGTTGTGATATACTCCTATCGTT 59.932 37.037 0.00 0.00 31.89 3.85
1465 1536 7.423199 TGTGTTGTGATATACTCCTATCGTTC 58.577 38.462 0.00 0.00 31.89 3.95
1466 1537 6.577800 GTGTTGTGATATACTCCTATCGTTCG 59.422 42.308 0.00 0.00 31.89 3.95
1467 1538 6.484308 TGTTGTGATATACTCCTATCGTTCGA 59.516 38.462 0.00 0.00 31.89 3.71
1468 1539 7.012610 TGTTGTGATATACTCCTATCGTTCGAA 59.987 37.037 0.00 0.00 31.89 3.71
1469 1540 7.500720 TGTGATATACTCCTATCGTTCGAAA 57.499 36.000 0.00 0.00 31.89 3.46
1470 1541 7.933396 TGTGATATACTCCTATCGTTCGAAAA 58.067 34.615 0.00 0.00 31.89 2.29
1471 1542 8.573885 TGTGATATACTCCTATCGTTCGAAAAT 58.426 33.333 0.00 0.00 31.89 1.82
1476 1547 8.798748 ATACTCCTATCGTTCGAAAATACTTG 57.201 34.615 0.00 0.00 0.00 3.16
1477 1548 6.628185 ACTCCTATCGTTCGAAAATACTTGT 58.372 36.000 0.00 0.00 0.00 3.16
1478 1549 6.750963 ACTCCTATCGTTCGAAAATACTTGTC 59.249 38.462 0.00 0.00 0.00 3.18
1479 1550 6.623486 TCCTATCGTTCGAAAATACTTGTCA 58.377 36.000 0.00 0.00 0.00 3.58
1480 1551 7.262772 TCCTATCGTTCGAAAATACTTGTCAT 58.737 34.615 0.00 0.00 0.00 3.06
1481 1552 7.762615 TCCTATCGTTCGAAAATACTTGTCATT 59.237 33.333 0.00 0.00 0.00 2.57
1482 1553 9.027129 CCTATCGTTCGAAAATACTTGTCATTA 57.973 33.333 0.00 0.00 0.00 1.90
1543 1614 8.772250 ACATCTAGATACATCCCTTTTTCTTCA 58.228 33.333 4.54 0.00 0.00 3.02
1544 1615 9.790344 CATCTAGATACATCCCTTTTTCTTCAT 57.210 33.333 4.54 0.00 0.00 2.57
1549 1620 9.312904 AGATACATCCCTTTTTCTTCATTTTGA 57.687 29.630 0.00 0.00 0.00 2.69
1551 1622 9.880157 ATACATCCCTTTTTCTTCATTTTGATG 57.120 29.630 0.00 0.00 33.80 3.07
1552 1623 7.965718 ACATCCCTTTTTCTTCATTTTGATGA 58.034 30.769 0.00 0.00 32.39 2.92
1553 1624 7.874528 ACATCCCTTTTTCTTCATTTTGATGAC 59.125 33.333 0.00 0.00 31.43 3.06
1554 1625 7.358770 TCCCTTTTTCTTCATTTTGATGACA 57.641 32.000 0.00 0.00 31.43 3.58
1555 1626 7.790027 TCCCTTTTTCTTCATTTTGATGACAA 58.210 30.769 0.00 0.00 31.43 3.18
1556 1627 7.927629 TCCCTTTTTCTTCATTTTGATGACAAG 59.072 33.333 0.00 0.00 37.32 3.16
1557 1628 7.712205 CCCTTTTTCTTCATTTTGATGACAAGT 59.288 33.333 0.00 0.00 37.32 3.16
1558 1629 9.748708 CCTTTTTCTTCATTTTGATGACAAGTA 57.251 29.630 0.00 0.00 37.32 2.24
1564 1635 9.611284 TCTTCATTTTGATGACAAGTATTTTCG 57.389 29.630 0.00 0.00 37.32 3.46
1565 1636 8.741101 TTCATTTTGATGACAAGTATTTTCGG 57.259 30.769 0.00 0.00 37.32 4.30
1566 1637 8.105097 TCATTTTGATGACAAGTATTTTCGGA 57.895 30.769 0.00 0.00 37.32 4.55
1567 1638 8.020819 TCATTTTGATGACAAGTATTTTCGGAC 58.979 33.333 0.00 0.00 37.32 4.79
1568 1639 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
1569 1640 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
1570 1641 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
1571 1642 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
1572 1643 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
1573 1644 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1574 1645 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
1575 1646 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
1589 1660 2.224548 GGAGGGAGTAGTTGCACAAGTT 60.225 50.000 0.00 0.00 0.00 2.66
1603 1674 1.676006 ACAAGTTTGTGCCAGTACTGC 59.324 47.619 17.86 13.07 40.49 4.40
1604 1675 1.001378 CAAGTTTGTGCCAGTACTGCC 60.001 52.381 17.86 7.19 0.00 4.85
1617 1688 5.176958 GCCAGTACTGCCATACTTATAAACG 59.823 44.000 17.86 0.00 32.92 3.60
1618 1689 5.176958 CCAGTACTGCCATACTTATAAACGC 59.823 44.000 17.86 0.00 32.92 4.84
1620 1691 7.143340 CAGTACTGCCATACTTATAAACGCTA 58.857 38.462 10.54 0.00 32.92 4.26
1621 1692 7.114529 CAGTACTGCCATACTTATAAACGCTAC 59.885 40.741 10.54 0.00 32.92 3.58
1653 1728 0.606604 GCTGTCCGTCTTGTTCCCTA 59.393 55.000 0.00 0.00 0.00 3.53
1676 1751 7.962918 CCTAAATGAATAAAAGTGTCCAGTTCG 59.037 37.037 0.00 0.00 0.00 3.95
1680 1755 0.655733 AAAAGTGTCCAGTTCGTGCG 59.344 50.000 0.00 0.00 0.00 5.34
2061 2147 2.074547 TCGTCCCACTCACGATTTTC 57.925 50.000 0.00 0.00 41.27 2.29
2070 2156 4.194640 CACTCACGATTTTCTCCATGGAT 58.805 43.478 16.63 0.00 0.00 3.41
2079 2165 8.531146 ACGATTTTCTCCATGGATTTGTTTAAT 58.469 29.630 16.63 8.25 0.00 1.40
2209 2309 0.609662 AATTCATGGGTGTTGCCAGC 59.390 50.000 0.00 0.00 39.65 4.85
2225 2325 3.248266 GCCAGCTGTAGATTTTGCAAAG 58.752 45.455 13.81 0.00 0.00 2.77
2434 2556 5.625311 CCTTGCTTGAATCGTCAAAAAGTAC 59.375 40.000 9.16 0.00 43.18 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.852495 TTCCAGCCAACCGCGAGATC 62.852 60.000 8.23 0.00 44.76 2.75
2 3 3.621805 TTCCAGCCAACCGCGAGA 61.622 61.111 8.23 0.00 44.76 4.04
3 4 3.423154 GTTCCAGCCAACCGCGAG 61.423 66.667 8.23 0.00 44.76 5.03
8 9 3.670377 GTGCGGTTCCAGCCAACC 61.670 66.667 0.54 0.54 42.34 3.77
9 10 2.904866 TGTGCGGTTCCAGCCAAC 60.905 61.111 0.00 0.00 0.00 3.77
10 11 2.594303 CTGTGCGGTTCCAGCCAA 60.594 61.111 0.00 0.00 0.00 4.52
11 12 3.535629 CTCTGTGCGGTTCCAGCCA 62.536 63.158 0.00 2.16 0.00 4.75
12 13 2.743928 CTCTGTGCGGTTCCAGCC 60.744 66.667 0.00 0.00 0.00 4.85
13 14 1.166531 AAACTCTGTGCGGTTCCAGC 61.167 55.000 0.00 0.00 0.00 4.85
14 15 0.868406 GAAACTCTGTGCGGTTCCAG 59.132 55.000 0.00 0.00 0.00 3.86
15 16 0.179234 TGAAACTCTGTGCGGTTCCA 59.821 50.000 0.00 0.00 0.00 3.53
16 17 0.586802 GTGAAACTCTGTGCGGTTCC 59.413 55.000 0.00 0.00 0.00 3.62
17 18 0.586802 GGTGAAACTCTGTGCGGTTC 59.413 55.000 0.00 0.00 36.74 3.62
18 19 0.107410 TGGTGAAACTCTGTGCGGTT 60.107 50.000 0.00 0.00 36.74 4.44
19 20 0.108585 ATGGTGAAACTCTGTGCGGT 59.891 50.000 0.00 0.00 36.74 5.68
20 21 0.518636 CATGGTGAAACTCTGTGCGG 59.481 55.000 0.00 0.00 36.74 5.69
21 22 1.511850 TCATGGTGAAACTCTGTGCG 58.488 50.000 0.00 0.00 36.74 5.34
22 23 3.058639 GTCTTCATGGTGAAACTCTGTGC 60.059 47.826 0.00 0.00 35.73 4.57
23 24 3.185188 CGTCTTCATGGTGAAACTCTGTG 59.815 47.826 0.00 0.00 35.73 3.66
24 25 3.181465 ACGTCTTCATGGTGAAACTCTGT 60.181 43.478 0.00 0.00 35.73 3.41
25 26 3.393800 ACGTCTTCATGGTGAAACTCTG 58.606 45.455 0.00 0.00 35.73 3.35
26 27 3.753294 ACGTCTTCATGGTGAAACTCT 57.247 42.857 0.00 0.00 35.73 3.24
27 28 4.929808 ACATACGTCTTCATGGTGAAACTC 59.070 41.667 0.00 0.00 35.73 3.01
28 29 4.894784 ACATACGTCTTCATGGTGAAACT 58.105 39.130 0.00 0.00 35.73 2.66
29 30 4.201589 CGACATACGTCTTCATGGTGAAAC 60.202 45.833 0.00 0.00 40.23 2.78
30 31 3.924073 CGACATACGTCTTCATGGTGAAA 59.076 43.478 0.00 0.00 40.23 2.69
31 32 3.507786 CGACATACGTCTTCATGGTGAA 58.492 45.455 0.00 0.00 40.23 3.18
32 33 2.734175 GCGACATACGTCTTCATGGTGA 60.734 50.000 0.00 0.00 44.60 4.02
33 34 1.588404 GCGACATACGTCTTCATGGTG 59.412 52.381 0.00 0.00 44.60 4.17
34 35 1.470979 GGCGACATACGTCTTCATGGT 60.471 52.381 0.00 0.00 43.76 3.55
35 36 1.209128 GGCGACATACGTCTTCATGG 58.791 55.000 0.00 0.00 43.76 3.66
36 37 0.846401 CGGCGACATACGTCTTCATG 59.154 55.000 0.00 0.00 45.03 3.07
37 38 0.870307 GCGGCGACATACGTCTTCAT 60.870 55.000 12.98 0.00 45.03 2.57
38 39 1.515519 GCGGCGACATACGTCTTCA 60.516 57.895 12.98 0.00 45.03 3.02
39 40 2.228914 GGCGGCGACATACGTCTTC 61.229 63.158 12.98 0.00 45.03 2.87
40 41 2.202703 GGCGGCGACATACGTCTT 60.203 61.111 12.98 0.00 45.03 3.01
41 42 3.411418 CTGGCGGCGACATACGTCT 62.411 63.158 19.33 0.00 45.03 4.18
42 43 2.327002 TACTGGCGGCGACATACGTC 62.327 60.000 19.33 0.00 44.60 4.34
43 44 2.409055 TACTGGCGGCGACATACGT 61.409 57.895 19.33 14.39 44.60 3.57
44 45 1.942712 GTACTGGCGGCGACATACG 60.943 63.158 19.33 7.58 45.66 3.06
45 46 0.594284 GAGTACTGGCGGCGACATAC 60.594 60.000 19.33 20.08 0.00 2.39
46 47 1.731433 GGAGTACTGGCGGCGACATA 61.731 60.000 19.33 8.45 0.00 2.29
47 48 2.494918 GAGTACTGGCGGCGACAT 59.505 61.111 19.33 9.61 0.00 3.06
48 49 3.755628 GGAGTACTGGCGGCGACA 61.756 66.667 17.61 17.61 0.00 4.35
49 50 4.849329 CGGAGTACTGGCGGCGAC 62.849 72.222 12.98 9.31 0.00 5.19
69 70 2.105649 GGTGAAGGGATGGAAGATCTCC 59.894 54.545 0.00 0.00 45.64 3.71
70 71 2.224161 CGGTGAAGGGATGGAAGATCTC 60.224 54.545 0.00 0.00 0.00 2.75
71 72 1.765314 CGGTGAAGGGATGGAAGATCT 59.235 52.381 0.00 0.00 0.00 2.75
72 73 1.202698 CCGGTGAAGGGATGGAAGATC 60.203 57.143 0.00 0.00 0.00 2.75
73 74 0.839946 CCGGTGAAGGGATGGAAGAT 59.160 55.000 0.00 0.00 0.00 2.40
74 75 0.252513 TCCGGTGAAGGGATGGAAGA 60.253 55.000 0.00 0.00 0.00 2.87
75 76 0.179000 CTCCGGTGAAGGGATGGAAG 59.821 60.000 0.00 0.00 31.99 3.46
76 77 1.910580 GCTCCGGTGAAGGGATGGAA 61.911 60.000 7.92 0.00 31.99 3.53
77 78 2.367202 GCTCCGGTGAAGGGATGGA 61.367 63.158 7.92 0.00 31.99 3.41
78 79 2.190578 GCTCCGGTGAAGGGATGG 59.809 66.667 7.92 0.00 31.99 3.51
79 80 2.190578 GGCTCCGGTGAAGGGATG 59.809 66.667 7.92 0.00 31.99 3.51
80 81 3.090532 GGGCTCCGGTGAAGGGAT 61.091 66.667 7.92 0.00 31.99 3.85
81 82 4.332543 AGGGCTCCGGTGAAGGGA 62.333 66.667 7.92 0.00 0.00 4.20
82 83 3.787001 GAGGGCTCCGGTGAAGGG 61.787 72.222 7.92 0.00 0.00 3.95
83 84 2.317149 GATGAGGGCTCCGGTGAAGG 62.317 65.000 7.92 0.00 0.00 3.46
84 85 1.144936 GATGAGGGCTCCGGTGAAG 59.855 63.158 7.92 0.00 0.00 3.02
85 86 1.306141 AGATGAGGGCTCCGGTGAA 60.306 57.895 7.92 0.00 0.00 3.18
86 87 1.758514 GAGATGAGGGCTCCGGTGA 60.759 63.158 7.92 0.00 0.00 4.02
87 88 2.818132 GAGATGAGGGCTCCGGTG 59.182 66.667 0.00 0.00 0.00 4.94
88 89 2.835431 CGAGATGAGGGCTCCGGT 60.835 66.667 0.00 0.00 0.00 5.28
89 90 4.292178 GCGAGATGAGGGCTCCGG 62.292 72.222 0.00 0.00 0.00 5.14
90 91 4.292178 GGCGAGATGAGGGCTCCG 62.292 72.222 0.00 0.00 0.00 4.63
91 92 4.292178 CGGCGAGATGAGGGCTCC 62.292 72.222 0.00 0.00 0.00 4.70
92 93 4.959596 GCGGCGAGATGAGGGCTC 62.960 72.222 12.98 0.00 0.00 4.70
96 97 4.933064 GTCGGCGGCGAGATGAGG 62.933 72.222 35.53 1.41 0.00 3.86
97 98 4.933064 GGTCGGCGGCGAGATGAG 62.933 72.222 35.53 2.29 0.00 2.90
99 100 4.592192 ATGGTCGGCGGCGAGATG 62.592 66.667 35.53 4.03 0.00 2.90
100 101 4.286320 GATGGTCGGCGGCGAGAT 62.286 66.667 35.53 27.50 0.00 2.75
105 106 4.856801 ACATGGATGGTCGGCGGC 62.857 66.667 7.21 4.32 0.00 6.53
106 107 2.867793 TTCACATGGATGGTCGGCGG 62.868 60.000 7.21 0.00 0.00 6.13
107 108 1.431488 CTTCACATGGATGGTCGGCG 61.431 60.000 0.00 0.00 0.00 6.46
108 109 0.107703 TCTTCACATGGATGGTCGGC 60.108 55.000 0.00 0.00 0.00 5.54
109 110 2.401583 TTCTTCACATGGATGGTCGG 57.598 50.000 0.00 0.00 0.00 4.79
110 111 2.541346 CGATTCTTCACATGGATGGTCG 59.459 50.000 0.00 5.02 0.00 4.79
111 112 3.557595 GTCGATTCTTCACATGGATGGTC 59.442 47.826 0.00 0.00 0.00 4.02
112 113 3.535561 GTCGATTCTTCACATGGATGGT 58.464 45.455 0.00 0.00 0.00 3.55
113 114 2.541346 CGTCGATTCTTCACATGGATGG 59.459 50.000 0.00 0.00 0.00 3.51
114 115 3.447742 TCGTCGATTCTTCACATGGATG 58.552 45.455 0.00 0.00 0.00 3.51
115 116 3.131223 ACTCGTCGATTCTTCACATGGAT 59.869 43.478 0.00 0.00 0.00 3.41
116 117 2.492088 ACTCGTCGATTCTTCACATGGA 59.508 45.455 0.00 0.00 0.00 3.41
117 118 2.600420 CACTCGTCGATTCTTCACATGG 59.400 50.000 0.00 0.00 0.00 3.66
118 119 3.501950 TCACTCGTCGATTCTTCACATG 58.498 45.455 0.00 0.00 0.00 3.21
119 120 3.850122 TCACTCGTCGATTCTTCACAT 57.150 42.857 0.00 0.00 0.00 3.21
120 121 3.440522 AGATCACTCGTCGATTCTTCACA 59.559 43.478 0.00 0.00 0.00 3.58
121 122 3.788694 CAGATCACTCGTCGATTCTTCAC 59.211 47.826 0.00 0.00 0.00 3.18
122 123 3.181496 CCAGATCACTCGTCGATTCTTCA 60.181 47.826 0.00 0.00 0.00 3.02
123 124 3.367607 CCAGATCACTCGTCGATTCTTC 58.632 50.000 0.00 0.00 0.00 2.87
124 125 2.099921 CCCAGATCACTCGTCGATTCTT 59.900 50.000 0.00 0.00 0.00 2.52
125 126 1.678627 CCCAGATCACTCGTCGATTCT 59.321 52.381 0.00 0.00 0.00 2.40
126 127 1.405821 ACCCAGATCACTCGTCGATTC 59.594 52.381 0.00 0.00 0.00 2.52
127 128 1.405821 GACCCAGATCACTCGTCGATT 59.594 52.381 0.00 0.00 0.00 3.34
128 129 1.025812 GACCCAGATCACTCGTCGAT 58.974 55.000 0.00 0.00 0.00 3.59
129 130 1.366854 CGACCCAGATCACTCGTCGA 61.367 60.000 15.37 0.00 43.05 4.20
130 131 1.062685 CGACCCAGATCACTCGTCG 59.937 63.158 9.29 9.29 38.58 5.12
131 132 1.030488 TCCGACCCAGATCACTCGTC 61.030 60.000 0.00 0.00 0.00 4.20
132 133 0.395862 ATCCGACCCAGATCACTCGT 60.396 55.000 0.00 0.00 0.00 4.18
133 134 0.312416 GATCCGACCCAGATCACTCG 59.688 60.000 0.00 0.00 39.97 4.18
134 135 0.676736 GGATCCGACCCAGATCACTC 59.323 60.000 0.00 0.00 41.64 3.51
135 136 0.032117 TGGATCCGACCCAGATCACT 60.032 55.000 7.39 0.00 41.64 3.41
136 137 2.516448 TGGATCCGACCCAGATCAC 58.484 57.895 7.39 0.00 41.64 3.06
141 142 2.053618 GGATCTGGATCCGACCCAG 58.946 63.158 13.04 1.70 46.84 4.45
142 143 4.295407 GGATCTGGATCCGACCCA 57.705 61.111 13.04 0.00 46.84 4.51
149 150 2.029666 CGGCCACGGATCTGGATC 59.970 66.667 2.24 2.24 37.11 3.36
150 151 4.241555 GCGGCCACGGATCTGGAT 62.242 66.667 2.24 0.00 41.36 3.41
167 168 3.840594 CAATGGTGGGCATGGCGG 61.841 66.667 13.76 0.00 0.00 6.13
168 169 4.517815 GCAATGGTGGGCATGGCG 62.518 66.667 13.76 0.00 0.00 5.69
169 170 4.165486 GGCAATGGTGGGCATGGC 62.165 66.667 11.56 11.56 0.00 4.40
170 171 2.684294 TGGCAATGGTGGGCATGG 60.684 61.111 0.00 0.00 35.74 3.66
171 172 2.897207 CTGGCAATGGTGGGCATG 59.103 61.111 0.00 0.00 40.26 4.06
172 173 3.078836 GCTGGCAATGGTGGGCAT 61.079 61.111 0.00 0.00 40.26 4.40
173 174 3.908904 ATGCTGGCAATGGTGGGCA 62.909 57.895 0.00 0.00 39.18 5.36
174 175 3.078836 ATGCTGGCAATGGTGGGC 61.079 61.111 0.00 0.00 0.00 5.36
175 176 1.683025 TGATGCTGGCAATGGTGGG 60.683 57.895 0.00 0.00 0.00 4.61
176 177 1.514087 GTGATGCTGGCAATGGTGG 59.486 57.895 0.00 0.00 0.00 4.61
177 178 1.252215 TGGTGATGCTGGCAATGGTG 61.252 55.000 0.00 0.00 0.00 4.17
178 179 0.968901 CTGGTGATGCTGGCAATGGT 60.969 55.000 0.00 0.00 0.00 3.55
179 180 1.813859 CTGGTGATGCTGGCAATGG 59.186 57.895 0.00 0.00 0.00 3.16
180 181 1.141019 GCTGGTGATGCTGGCAATG 59.859 57.895 0.00 0.00 0.00 2.82
181 182 2.056223 GGCTGGTGATGCTGGCAAT 61.056 57.895 0.00 0.00 0.00 3.56
182 183 2.677524 GGCTGGTGATGCTGGCAA 60.678 61.111 0.00 0.00 0.00 4.52
183 184 3.291031 ATGGCTGGTGATGCTGGCA 62.291 57.895 0.00 0.00 39.22 4.92
184 185 2.441532 ATGGCTGGTGATGCTGGC 60.442 61.111 0.00 0.00 0.00 4.85
185 186 2.125326 CCATGGCTGGTGATGCTGG 61.125 63.158 0.00 0.00 37.79 4.85
186 187 1.077285 TCCATGGCTGGTGATGCTG 60.077 57.895 6.96 0.00 43.61 4.41
187 188 1.226542 CTCCATGGCTGGTGATGCT 59.773 57.895 6.96 0.00 43.61 3.79
188 189 1.077212 ACTCCATGGCTGGTGATGC 60.077 57.895 6.96 0.00 43.61 3.91
189 190 0.812811 CGACTCCATGGCTGGTGATG 60.813 60.000 6.96 0.00 43.61 3.07
190 191 1.267574 ACGACTCCATGGCTGGTGAT 61.268 55.000 6.96 0.00 43.61 3.06
191 192 1.480212 AACGACTCCATGGCTGGTGA 61.480 55.000 6.96 0.00 43.61 4.02
192 193 1.003355 AACGACTCCATGGCTGGTG 60.003 57.895 6.96 2.20 43.61 4.17
193 194 1.003355 CAACGACTCCATGGCTGGT 60.003 57.895 6.96 5.68 43.61 4.00
194 195 1.746615 CCAACGACTCCATGGCTGG 60.747 63.158 6.96 2.10 44.64 4.85
195 196 0.606401 AACCAACGACTCCATGGCTG 60.606 55.000 6.96 4.86 37.77 4.85
196 197 0.606401 CAACCAACGACTCCATGGCT 60.606 55.000 6.96 0.00 37.77 4.75
197 198 0.889186 ACAACCAACGACTCCATGGC 60.889 55.000 6.96 0.00 37.77 4.40
198 199 1.156736 GACAACCAACGACTCCATGG 58.843 55.000 4.97 4.97 40.16 3.66
199 200 0.790207 CGACAACCAACGACTCCATG 59.210 55.000 0.00 0.00 0.00 3.66
200 201 0.391597 ACGACAACCAACGACTCCAT 59.608 50.000 0.00 0.00 0.00 3.41
201 202 0.249155 GACGACAACCAACGACTCCA 60.249 55.000 0.00 0.00 0.00 3.86
202 203 1.273455 CGACGACAACCAACGACTCC 61.273 60.000 0.00 0.00 0.00 3.85
203 204 1.873355 GCGACGACAACCAACGACTC 61.873 60.000 0.00 0.00 0.00 3.36
204 205 1.947642 GCGACGACAACCAACGACT 60.948 57.895 0.00 0.00 0.00 4.18
205 206 2.232296 TGCGACGACAACCAACGAC 61.232 57.895 0.00 0.00 0.00 4.34
206 207 2.104530 TGCGACGACAACCAACGA 59.895 55.556 0.00 0.00 0.00 3.85
207 208 2.244382 GTGCGACGACAACCAACG 59.756 61.111 0.00 0.00 0.00 4.10
208 209 2.244382 CGTGCGACGACAACCAAC 59.756 61.111 0.00 0.00 46.05 3.77
209 210 2.962786 CCGTGCGACGACAACCAA 60.963 61.111 0.00 0.00 46.05 3.67
223 224 2.599645 GATCTCACATGGCTGGCCGT 62.600 60.000 7.14 3.63 39.42 5.68
224 225 1.890979 GATCTCACATGGCTGGCCG 60.891 63.158 7.14 0.00 39.42 6.13
225 226 0.106819 AAGATCTCACATGGCTGGCC 60.107 55.000 4.43 4.43 0.00 5.36
226 227 1.022735 CAAGATCTCACATGGCTGGC 58.977 55.000 0.00 0.00 0.00 4.85
227 228 2.014857 CACAAGATCTCACATGGCTGG 58.985 52.381 0.00 0.00 0.00 4.85
228 229 2.014857 CCACAAGATCTCACATGGCTG 58.985 52.381 0.00 0.00 0.00 4.85
229 230 1.064906 CCCACAAGATCTCACATGGCT 60.065 52.381 0.00 0.00 0.00 4.75
230 231 1.340405 ACCCACAAGATCTCACATGGC 60.340 52.381 0.00 0.00 0.00 4.40
231 232 2.026915 TCACCCACAAGATCTCACATGG 60.027 50.000 0.00 1.61 0.00 3.66
232 233 3.339253 TCACCCACAAGATCTCACATG 57.661 47.619 0.00 0.00 0.00 3.21
233 234 4.521146 GATTCACCCACAAGATCTCACAT 58.479 43.478 0.00 0.00 0.00 3.21
234 235 3.307691 GGATTCACCCACAAGATCTCACA 60.308 47.826 0.00 0.00 0.00 3.58
235 236 3.274288 GGATTCACCCACAAGATCTCAC 58.726 50.000 0.00 0.00 0.00 3.51
236 237 2.912295 TGGATTCACCCACAAGATCTCA 59.088 45.455 0.00 0.00 38.00 3.27
237 238 3.634397 TGGATTCACCCACAAGATCTC 57.366 47.619 0.00 0.00 38.00 2.75
238 239 3.074390 TGTTGGATTCACCCACAAGATCT 59.926 43.478 0.00 0.00 40.61 2.75
239 240 3.420893 TGTTGGATTCACCCACAAGATC 58.579 45.455 0.00 0.00 40.61 2.75
240 241 3.524095 TGTTGGATTCACCCACAAGAT 57.476 42.857 0.00 0.00 40.61 2.40
241 242 3.304911 TTGTTGGATTCACCCACAAGA 57.695 42.857 0.00 0.00 45.34 3.02
244 245 1.698506 GGTTGTTGGATTCACCCACA 58.301 50.000 0.00 0.00 41.60 4.17
245 246 0.966179 GGGTTGTTGGATTCACCCAC 59.034 55.000 1.10 0.00 37.36 4.61
246 247 0.178947 GGGGTTGTTGGATTCACCCA 60.179 55.000 8.47 0.00 39.08 4.51
247 248 0.902984 GGGGGTTGTTGGATTCACCC 60.903 60.000 0.00 0.00 38.00 4.61
248 249 0.114364 AGGGGGTTGTTGGATTCACC 59.886 55.000 0.00 0.00 39.54 4.02
249 250 1.075536 AGAGGGGGTTGTTGGATTCAC 59.924 52.381 0.00 0.00 0.00 3.18
250 251 1.455822 AGAGGGGGTTGTTGGATTCA 58.544 50.000 0.00 0.00 0.00 2.57
251 252 3.732048 TTAGAGGGGGTTGTTGGATTC 57.268 47.619 0.00 0.00 0.00 2.52
252 253 3.774734 GTTTAGAGGGGGTTGTTGGATT 58.225 45.455 0.00 0.00 0.00 3.01
253 254 2.290705 CGTTTAGAGGGGGTTGTTGGAT 60.291 50.000 0.00 0.00 0.00 3.41
254 255 1.072648 CGTTTAGAGGGGGTTGTTGGA 59.927 52.381 0.00 0.00 0.00 3.53
255 256 1.530323 CGTTTAGAGGGGGTTGTTGG 58.470 55.000 0.00 0.00 0.00 3.77
256 257 1.530323 CCGTTTAGAGGGGGTTGTTG 58.470 55.000 0.00 0.00 0.00 3.33
257 258 0.402887 CCCGTTTAGAGGGGGTTGTT 59.597 55.000 3.04 0.00 45.43 2.83
258 259 2.072366 CCCGTTTAGAGGGGGTTGT 58.928 57.895 3.04 0.00 45.43 3.32
265 266 5.031066 TGGATCAAATACCCGTTTAGAGG 57.969 43.478 0.00 0.00 0.00 3.69
266 267 6.113411 AGTTGGATCAAATACCCGTTTAGAG 58.887 40.000 0.00 0.00 0.00 2.43
267 268 6.057321 AGTTGGATCAAATACCCGTTTAGA 57.943 37.500 0.00 0.00 0.00 2.10
268 269 6.753107 AAGTTGGATCAAATACCCGTTTAG 57.247 37.500 0.00 0.00 0.00 1.85
269 270 7.337436 CCTTAAGTTGGATCAAATACCCGTTTA 59.663 37.037 0.97 0.00 0.00 2.01
270 271 6.152154 CCTTAAGTTGGATCAAATACCCGTTT 59.848 38.462 0.97 0.00 0.00 3.60
271 272 5.650703 CCTTAAGTTGGATCAAATACCCGTT 59.349 40.000 0.97 0.00 0.00 4.44
272 273 5.190677 CCTTAAGTTGGATCAAATACCCGT 58.809 41.667 0.97 0.00 0.00 5.28
273 274 4.578928 CCCTTAAGTTGGATCAAATACCCG 59.421 45.833 0.97 0.00 0.00 5.28
274 275 4.893524 CCCCTTAAGTTGGATCAAATACCC 59.106 45.833 0.97 0.00 0.00 3.69
275 276 5.762279 TCCCCTTAAGTTGGATCAAATACC 58.238 41.667 6.84 0.00 0.00 2.73
276 277 5.828328 CCTCCCCTTAAGTTGGATCAAATAC 59.172 44.000 10.49 0.00 0.00 1.89
277 278 5.734140 TCCTCCCCTTAAGTTGGATCAAATA 59.266 40.000 10.49 0.00 0.00 1.40
278 279 4.544152 TCCTCCCCTTAAGTTGGATCAAAT 59.456 41.667 10.49 0.00 0.00 2.32
279 280 3.920197 TCCTCCCCTTAAGTTGGATCAAA 59.080 43.478 10.49 0.00 0.00 2.69
280 281 3.537337 TCCTCCCCTTAAGTTGGATCAA 58.463 45.455 10.49 0.00 0.00 2.57
281 282 3.214694 TCCTCCCCTTAAGTTGGATCA 57.785 47.619 10.49 0.25 0.00 2.92
282 283 4.166144 TCAATCCTCCCCTTAAGTTGGATC 59.834 45.833 10.49 0.00 33.70 3.36
283 284 4.119155 TCAATCCTCCCCTTAAGTTGGAT 58.881 43.478 10.49 9.60 36.03 3.41
284 285 3.537337 TCAATCCTCCCCTTAAGTTGGA 58.463 45.455 9.83 9.83 0.00 3.53
285 286 4.316025 TTCAATCCTCCCCTTAAGTTGG 57.684 45.455 0.97 1.87 0.00 3.77
286 287 6.857437 ATTTTCAATCCTCCCCTTAAGTTG 57.143 37.500 0.97 0.00 0.00 3.16
287 288 7.396339 GTGTATTTTCAATCCTCCCCTTAAGTT 59.604 37.037 0.97 0.00 0.00 2.66
288 289 6.890268 GTGTATTTTCAATCCTCCCCTTAAGT 59.110 38.462 0.97 0.00 0.00 2.24
289 290 6.321435 GGTGTATTTTCAATCCTCCCCTTAAG 59.679 42.308 0.00 0.00 0.00 1.85
290 291 6.192044 GGTGTATTTTCAATCCTCCCCTTAA 58.808 40.000 0.00 0.00 0.00 1.85
291 292 5.254267 TGGTGTATTTTCAATCCTCCCCTTA 59.746 40.000 0.00 0.00 0.00 2.69
292 293 4.045334 TGGTGTATTTTCAATCCTCCCCTT 59.955 41.667 0.00 0.00 0.00 3.95
293 294 3.596046 TGGTGTATTTTCAATCCTCCCCT 59.404 43.478 0.00 0.00 0.00 4.79
294 295 3.976015 TGGTGTATTTTCAATCCTCCCC 58.024 45.455 0.00 0.00 0.00 4.81
295 296 4.584743 GGATGGTGTATTTTCAATCCTCCC 59.415 45.833 0.00 0.00 0.00 4.30
296 297 4.275936 CGGATGGTGTATTTTCAATCCTCC 59.724 45.833 0.00 0.00 0.00 4.30
297 298 4.881850 ACGGATGGTGTATTTTCAATCCTC 59.118 41.667 0.00 0.00 0.00 3.71
298 299 4.855340 ACGGATGGTGTATTTTCAATCCT 58.145 39.130 0.00 0.00 0.00 3.24
299 300 4.036380 GGACGGATGGTGTATTTTCAATCC 59.964 45.833 0.00 0.00 0.00 3.01
300 301 4.036380 GGGACGGATGGTGTATTTTCAATC 59.964 45.833 0.00 0.00 0.00 2.67
301 302 3.951680 GGGACGGATGGTGTATTTTCAAT 59.048 43.478 0.00 0.00 0.00 2.57
302 303 3.244946 TGGGACGGATGGTGTATTTTCAA 60.245 43.478 0.00 0.00 0.00 2.69
303 304 2.306219 TGGGACGGATGGTGTATTTTCA 59.694 45.455 0.00 0.00 0.00 2.69
304 305 2.993937 TGGGACGGATGGTGTATTTTC 58.006 47.619 0.00 0.00 0.00 2.29
305 306 3.443145 TTGGGACGGATGGTGTATTTT 57.557 42.857 0.00 0.00 0.00 1.82
306 307 3.443145 TTTGGGACGGATGGTGTATTT 57.557 42.857 0.00 0.00 0.00 1.40
307 308 3.662759 ATTTGGGACGGATGGTGTATT 57.337 42.857 0.00 0.00 0.00 1.89
308 309 3.662759 AATTTGGGACGGATGGTGTAT 57.337 42.857 0.00 0.00 0.00 2.29
309 310 3.520317 AGTAATTTGGGACGGATGGTGTA 59.480 43.478 0.00 0.00 0.00 2.90
310 311 2.307686 AGTAATTTGGGACGGATGGTGT 59.692 45.455 0.00 0.00 0.00 4.16
311 312 2.999331 AGTAATTTGGGACGGATGGTG 58.001 47.619 0.00 0.00 0.00 4.17
312 313 3.732048 AAGTAATTTGGGACGGATGGT 57.268 42.857 0.00 0.00 0.00 3.55
313 314 4.451096 CGATAAGTAATTTGGGACGGATGG 59.549 45.833 0.00 0.00 0.00 3.51
314 315 5.054477 ACGATAAGTAATTTGGGACGGATG 58.946 41.667 0.00 0.00 0.00 3.51
315 316 5.286267 ACGATAAGTAATTTGGGACGGAT 57.714 39.130 0.00 0.00 0.00 4.18
316 317 4.741321 ACGATAAGTAATTTGGGACGGA 57.259 40.909 0.00 0.00 0.00 4.69
317 318 6.907206 TTTACGATAAGTAATTTGGGACGG 57.093 37.500 0.00 0.00 44.03 4.79
318 319 9.217223 CATTTTTACGATAAGTAATTTGGGACG 57.783 33.333 0.00 0.00 44.03 4.79
319 320 9.511144 CCATTTTTACGATAAGTAATTTGGGAC 57.489 33.333 0.00 0.00 44.03 4.46
320 321 9.463902 TCCATTTTTACGATAAGTAATTTGGGA 57.536 29.630 0.00 0.00 44.03 4.37
329 330 8.342634 CCATTTCGATCCATTTTTACGATAAGT 58.657 33.333 0.00 0.00 33.25 2.24
330 331 8.556194 TCCATTTCGATCCATTTTTACGATAAG 58.444 33.333 0.00 0.00 33.25 1.73
331 332 8.439993 TCCATTTCGATCCATTTTTACGATAA 57.560 30.769 0.00 0.00 33.25 1.75
332 333 8.503196 CATCCATTTCGATCCATTTTTACGATA 58.497 33.333 0.00 0.00 33.25 2.92
333 334 6.935741 TCCATTTCGATCCATTTTTACGAT 57.064 33.333 0.00 0.00 33.25 3.73
334 335 6.317642 ACATCCATTTCGATCCATTTTTACGA 59.682 34.615 0.00 0.00 0.00 3.43
335 336 6.494842 ACATCCATTTCGATCCATTTTTACG 58.505 36.000 0.00 0.00 0.00 3.18
336 337 9.612620 GATACATCCATTTCGATCCATTTTTAC 57.387 33.333 0.00 0.00 0.00 2.01
337 338 9.573166 AGATACATCCATTTCGATCCATTTTTA 57.427 29.630 0.00 0.00 0.00 1.52
338 339 8.469309 AGATACATCCATTTCGATCCATTTTT 57.531 30.769 0.00 0.00 0.00 1.94
339 340 9.573166 TTAGATACATCCATTTCGATCCATTTT 57.427 29.630 0.00 0.00 0.00 1.82
340 341 9.573166 TTTAGATACATCCATTTCGATCCATTT 57.427 29.630 0.00 0.00 0.00 2.32
341 342 9.573166 TTTTAGATACATCCATTTCGATCCATT 57.427 29.630 0.00 0.00 0.00 3.16
342 343 9.003658 GTTTTAGATACATCCATTTCGATCCAT 57.996 33.333 0.00 0.00 0.00 3.41
343 344 8.210946 AGTTTTAGATACATCCATTTCGATCCA 58.789 33.333 0.00 0.00 0.00 3.41
344 345 8.608844 AGTTTTAGATACATCCATTTCGATCC 57.391 34.615 0.00 0.00 0.00 3.36
389 390 9.104965 CCACGAATTACTTGTCTAATAAATGGA 57.895 33.333 0.00 0.00 0.00 3.41
390 391 7.855904 GCCACGAATTACTTGTCTAATAAATGG 59.144 37.037 0.00 0.00 0.00 3.16
391 392 8.394877 TGCCACGAATTACTTGTCTAATAAATG 58.605 33.333 0.00 0.00 0.00 2.32
392 393 8.500753 TGCCACGAATTACTTGTCTAATAAAT 57.499 30.769 0.00 0.00 0.00 1.40
393 394 7.820386 TCTGCCACGAATTACTTGTCTAATAAA 59.180 33.333 0.00 0.00 0.00 1.40
394 395 7.324935 TCTGCCACGAATTACTTGTCTAATAA 58.675 34.615 0.00 0.00 0.00 1.40
395 396 6.869695 TCTGCCACGAATTACTTGTCTAATA 58.130 36.000 0.00 0.00 0.00 0.98
396 397 5.730550 TCTGCCACGAATTACTTGTCTAAT 58.269 37.500 0.00 0.00 0.00 1.73
397 398 5.142061 TCTGCCACGAATTACTTGTCTAA 57.858 39.130 0.00 0.00 0.00 2.10
398 399 4.219944 ACTCTGCCACGAATTACTTGTCTA 59.780 41.667 0.00 0.00 0.00 2.59
399 400 3.006967 ACTCTGCCACGAATTACTTGTCT 59.993 43.478 0.00 0.00 0.00 3.41
400 401 3.326747 ACTCTGCCACGAATTACTTGTC 58.673 45.455 0.00 0.00 0.00 3.18
401 402 3.402628 ACTCTGCCACGAATTACTTGT 57.597 42.857 0.00 0.00 0.00 3.16
402 403 4.929808 ACTAACTCTGCCACGAATTACTTG 59.070 41.667 0.00 0.00 0.00 3.16
403 404 5.148651 ACTAACTCTGCCACGAATTACTT 57.851 39.130 0.00 0.00 0.00 2.24
404 405 4.803098 ACTAACTCTGCCACGAATTACT 57.197 40.909 0.00 0.00 0.00 2.24
405 406 5.404946 TGTACTAACTCTGCCACGAATTAC 58.595 41.667 0.00 0.00 0.00 1.89
406 407 5.648178 TGTACTAACTCTGCCACGAATTA 57.352 39.130 0.00 0.00 0.00 1.40
407 408 4.530710 TGTACTAACTCTGCCACGAATT 57.469 40.909 0.00 0.00 0.00 2.17
408 409 4.737855 ATGTACTAACTCTGCCACGAAT 57.262 40.909 0.00 0.00 0.00 3.34
409 410 5.648178 TTATGTACTAACTCTGCCACGAA 57.352 39.130 0.00 0.00 0.00 3.85
410 411 5.847111 ATTATGTACTAACTCTGCCACGA 57.153 39.130 0.00 0.00 0.00 4.35
411 412 7.490079 TGTTAATTATGTACTAACTCTGCCACG 59.510 37.037 0.00 0.00 0.00 4.94
412 413 8.712285 TGTTAATTATGTACTAACTCTGCCAC 57.288 34.615 0.00 0.00 0.00 5.01
413 414 9.158233 GTTGTTAATTATGTACTAACTCTGCCA 57.842 33.333 0.00 0.00 0.00 4.92
414 415 9.158233 TGTTGTTAATTATGTACTAACTCTGCC 57.842 33.333 0.00 0.00 0.00 4.85
423 424 8.580720 TGCCATGTTTGTTGTTAATTATGTACT 58.419 29.630 0.00 0.00 0.00 2.73
424 425 8.749841 TGCCATGTTTGTTGTTAATTATGTAC 57.250 30.769 0.00 0.00 0.00 2.90
437 438 4.405116 ACAATGAACTGCCATGTTTGTT 57.595 36.364 0.00 0.00 0.00 2.83
669 685 3.257393 GTGATACTCACACAGCCTTCTG 58.743 50.000 2.48 0.00 46.22 3.02
695 711 5.249420 GCTTAAGTGGTGAAGAAGGAAGAT 58.751 41.667 4.02 0.00 0.00 2.40
727 744 5.482908 ACTCGTCAATAGATGTGAGCTTTT 58.517 37.500 0.00 0.00 36.63 2.27
741 758 9.450807 CTATTTTTGTCTTTTGAACTCGTCAAT 57.549 29.630 0.00 0.00 45.71 2.57
749 766 8.626526 TGGACCTACTATTTTTGTCTTTTGAAC 58.373 33.333 0.00 0.00 0.00 3.18
765 786 7.990886 GGAATGTCAATATGTTTGGACCTACTA 59.009 37.037 0.00 0.00 0.00 1.82
766 787 6.828785 GGAATGTCAATATGTTTGGACCTACT 59.171 38.462 0.00 0.00 0.00 2.57
802 826 0.976641 TGAGAGCTACAGGTTGGTGG 59.023 55.000 0.00 0.00 0.00 4.61
823 847 5.062308 CACCGTCTATAAGAGTGTTTTCTGC 59.938 44.000 0.00 0.00 0.00 4.26
831 868 9.133627 CAATATTGATCACCGTCTATAAGAGTG 57.866 37.037 10.04 0.00 0.00 3.51
899 950 0.183492 TCTGATATGCCAGGCCAACC 59.817 55.000 9.64 0.00 34.99 3.77
900 953 1.133976 AGTCTGATATGCCAGGCCAAC 60.134 52.381 9.64 0.00 39.48 3.77
967 1027 2.601763 CTGTATTTTCTACCACGCGGTC 59.398 50.000 12.47 0.00 44.71 4.79
975 1035 4.081087 TCAGGTGAGGCTGTATTTTCTACC 60.081 45.833 0.00 0.00 0.00 3.18
986 1048 1.748122 GCCATGTCAGGTGAGGCTG 60.748 63.158 0.00 0.00 42.01 4.85
1065 1127 0.236711 CCACGCAGTTCTTCTTGCAG 59.763 55.000 0.00 0.00 41.61 4.41
1077 1139 3.947132 CTCCAGCACCTCCACGCAG 62.947 68.421 0.00 0.00 0.00 5.18
1164 1226 1.604308 CACCAGCCACATGAAGCCA 60.604 57.895 0.00 0.00 0.00 4.75
1454 1525 6.750501 TGACAAGTATTTTCGAACGATAGGAG 59.249 38.462 0.00 0.00 43.77 3.69
1455 1526 6.623486 TGACAAGTATTTTCGAACGATAGGA 58.377 36.000 0.00 0.00 43.77 2.94
1456 1527 6.880822 TGACAAGTATTTTCGAACGATAGG 57.119 37.500 0.00 0.00 43.77 2.57
1517 1588 8.772250 TGAAGAAAAAGGGATGTATCTAGATGT 58.228 33.333 15.79 1.25 0.00 3.06
1518 1589 9.790344 ATGAAGAAAAAGGGATGTATCTAGATG 57.210 33.333 15.79 0.00 0.00 2.90
1523 1594 9.312904 TCAAAATGAAGAAAAAGGGATGTATCT 57.687 29.630 0.00 0.00 0.00 1.98
1525 1596 9.880157 CATCAAAATGAAGAAAAAGGGATGTAT 57.120 29.630 0.00 0.00 34.61 2.29
1526 1597 9.087871 TCATCAAAATGAAGAAAAAGGGATGTA 57.912 29.630 0.00 0.00 38.97 2.29
1527 1598 7.874528 GTCATCAAAATGAAGAAAAAGGGATGT 59.125 33.333 0.00 0.00 43.42 3.06
1528 1599 7.874016 TGTCATCAAAATGAAGAAAAAGGGATG 59.126 33.333 0.00 0.00 43.42 3.51
1529 1600 7.965718 TGTCATCAAAATGAAGAAAAAGGGAT 58.034 30.769 0.00 0.00 43.42 3.85
1530 1601 7.358770 TGTCATCAAAATGAAGAAAAAGGGA 57.641 32.000 0.00 0.00 43.42 4.20
1531 1602 7.712205 ACTTGTCATCAAAATGAAGAAAAAGGG 59.288 33.333 11.03 0.00 43.42 3.95
1532 1603 8.652810 ACTTGTCATCAAAATGAAGAAAAAGG 57.347 30.769 11.03 0.00 43.42 3.11
1538 1609 9.611284 CGAAAATACTTGTCATCAAAATGAAGA 57.389 29.630 0.00 0.00 43.42 2.87
1539 1610 8.853345 CCGAAAATACTTGTCATCAAAATGAAG 58.147 33.333 0.00 0.00 43.42 3.02
1540 1611 8.572185 TCCGAAAATACTTGTCATCAAAATGAA 58.428 29.630 0.00 0.00 43.42 2.57
1541 1612 8.020819 GTCCGAAAATACTTGTCATCAAAATGA 58.979 33.333 0.00 0.00 39.63 2.57
1542 1613 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
1543 1614 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
1544 1615 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
1545 1616 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
1546 1617 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
1547 1618 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
1548 1619 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
1549 1620 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
1550 1621 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
1551 1622 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1552 1623 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
1553 1624 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
1554 1625 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
1555 1626 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
1556 1627 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
1557 1628 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
1558 1629 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
1559 1630 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
1560 1631 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
1561 1632 0.038744 AACTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
1562 1633 0.679002 CAACTACTCCCTCCGTCCGA 60.679 60.000 0.00 0.00 0.00 4.55
1563 1634 1.807886 CAACTACTCCCTCCGTCCG 59.192 63.158 0.00 0.00 0.00 4.79
1564 1635 1.255667 TGCAACTACTCCCTCCGTCC 61.256 60.000 0.00 0.00 0.00 4.79
1565 1636 0.108756 GTGCAACTACTCCCTCCGTC 60.109 60.000 0.00 0.00 0.00 4.79
1566 1637 0.830444 TGTGCAACTACTCCCTCCGT 60.830 55.000 0.00 0.00 38.04 4.69
1567 1638 0.320374 TTGTGCAACTACTCCCTCCG 59.680 55.000 0.00 0.00 38.04 4.63
1568 1639 1.348036 ACTTGTGCAACTACTCCCTCC 59.652 52.381 0.00 0.00 38.04 4.30
1569 1640 2.841442 ACTTGTGCAACTACTCCCTC 57.159 50.000 0.00 0.00 38.04 4.30
1570 1641 3.214328 CAAACTTGTGCAACTACTCCCT 58.786 45.455 0.00 0.00 38.04 4.20
1571 1642 2.949644 ACAAACTTGTGCAACTACTCCC 59.050 45.455 0.00 0.00 40.49 4.30
1598 1669 6.449698 GGTAGCGTTTATAAGTATGGCAGTA 58.550 40.000 0.00 0.00 0.00 2.74
1599 1670 5.295152 GGTAGCGTTTATAAGTATGGCAGT 58.705 41.667 0.00 0.00 0.00 4.40
1600 1671 4.384846 CGGTAGCGTTTATAAGTATGGCAG 59.615 45.833 6.07 0.00 0.00 4.85
1601 1672 4.037803 TCGGTAGCGTTTATAAGTATGGCA 59.962 41.667 14.79 0.00 0.00 4.92
1602 1673 4.549458 TCGGTAGCGTTTATAAGTATGGC 58.451 43.478 14.79 0.00 0.00 4.40
1603 1674 5.061808 GCATCGGTAGCGTTTATAAGTATGG 59.938 44.000 14.79 0.00 0.00 2.74
1604 1675 5.862323 AGCATCGGTAGCGTTTATAAGTATG 59.138 40.000 14.79 8.19 37.01 2.39
1653 1728 7.138736 CACGAACTGGACACTTTTATTCATTT 58.861 34.615 0.00 0.00 0.00 2.32
1737 1815 5.104527 CCATTAGTTCTTACACCATCTCCCA 60.105 44.000 0.00 0.00 0.00 4.37
1861 1940 8.669394 CGATGAGCTTATCGTAATTATGTGTA 57.331 34.615 27.48 0.00 43.60 2.90
1955 2040 7.495279 ACGAATTGCATGCCATAAATTGTATTT 59.505 29.630 16.68 0.00 0.00 1.40
2013 2099 2.012673 GAGGTGATGCGCTCAAGATTT 58.987 47.619 9.73 0.00 35.07 2.17
2061 2147 8.917088 AGGTGATAATTAAACAAATCCATGGAG 58.083 33.333 21.33 9.32 0.00 3.86
2109 2195 9.665719 ATTTCCTTTGCTTTGTAGAAAAGAAAA 57.334 25.926 7.11 0.73 46.19 2.29
2112 2198 9.912634 CATATTTCCTTTGCTTTGTAGAAAAGA 57.087 29.630 7.11 0.00 46.19 2.52
2113 2199 9.696917 ACATATTTCCTTTGCTTTGTAGAAAAG 57.303 29.630 0.00 0.00 43.89 2.27
2116 2202 9.515226 ACTACATATTTCCTTTGCTTTGTAGAA 57.485 29.630 12.26 0.00 38.22 2.10
2117 2203 9.515226 AACTACATATTTCCTTTGCTTTGTAGA 57.485 29.630 12.26 0.00 38.22 2.59
2118 2204 9.774742 GAACTACATATTTCCTTTGCTTTGTAG 57.225 33.333 0.00 0.00 40.52 2.74
2119 2205 9.515226 AGAACTACATATTTCCTTTGCTTTGTA 57.485 29.630 0.00 0.00 0.00 2.41
2120 2206 8.409358 AGAACTACATATTTCCTTTGCTTTGT 57.591 30.769 0.00 0.00 0.00 2.83
2121 2207 8.734386 AGAGAACTACATATTTCCTTTGCTTTG 58.266 33.333 0.00 0.00 0.00 2.77
2122 2208 8.870075 AGAGAACTACATATTTCCTTTGCTTT 57.130 30.769 0.00 0.00 0.00 3.51
2321 2437 8.777578 AAGGGAAACTAGGTCAAAAACTAAAT 57.222 30.769 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.