Multiple sequence alignment - TraesCS5A01G514100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G514100 chr5A 100.000 3129 0 0 1 3129 677917125 677913997 0.000000e+00 5779
1 TraesCS5A01G514100 chr5A 85.244 820 51 34 176 949 677939783 677938988 0.000000e+00 780
2 TraesCS5A01G514100 chr5A 98.942 189 2 0 2941 3129 677909514 677909326 3.870000e-89 339
3 TraesCS5A01G514100 chr5A 96.316 190 7 0 2940 3129 472730321 472730510 2.340000e-81 313
4 TraesCS5A01G514100 chr5A 96.296 189 7 0 2941 3129 472735002 472735190 8.430000e-81 311
5 TraesCS5A01G514100 chr5A 94.536 183 9 1 1 183 670016160 670016341 6.610000e-72 281
6 TraesCS5A01G514100 chr5A 78.628 379 35 22 175 518 677940277 677939910 3.160000e-50 209
7 TraesCS5A01G514100 chr5A 84.236 203 20 6 2433 2625 677844083 677843883 1.480000e-43 187
8 TraesCS5A01G514100 chr4B 85.881 2054 197 45 903 2940 638609533 638607557 0.000000e+00 2100
9 TraesCS5A01G514100 chr4B 83.415 205 17 9 2433 2626 638587286 638587088 1.150000e-39 174
10 TraesCS5A01G514100 chr1A 98.942 189 2 0 2941 3129 232100633 232100821 3.870000e-89 339
11 TraesCS5A01G514100 chr1A 98.413 189 3 0 2941 3129 232103837 232104025 1.800000e-87 333
12 TraesCS5A01G514100 chr7A 97.917 192 4 0 2938 3129 515978059 515978250 1.800000e-87 333
13 TraesCS5A01G514100 chr7A 98.413 189 3 0 2941 3129 515982746 515982934 1.800000e-87 333
14 TraesCS5A01G514100 chr7A 94.149 188 8 1 2941 3125 16318264 16318077 1.840000e-72 283
15 TraesCS5A01G514100 chr7A 94.536 183 9 1 1 183 511544930 511544749 6.610000e-72 281
16 TraesCS5A01G514100 chr2D 95.082 183 9 0 1 183 189275074 189275256 3.950000e-74 289
17 TraesCS5A01G514100 chr5D 94.624 186 9 1 1 185 159650419 159650234 1.420000e-73 287
18 TraesCS5A01G514100 chr1B 95.531 179 8 0 1 179 309930134 309930312 1.420000e-73 287
19 TraesCS5A01G514100 chr6A 93.299 194 10 1 2938 3128 443062937 443063130 1.840000e-72 283
20 TraesCS5A01G514100 chr3B 94.565 184 8 2 1 183 763008668 763008486 1.840000e-72 283
21 TraesCS5A01G514100 chr3B 94.536 183 9 1 1 183 215114634 215114453 6.610000e-72 281
22 TraesCS5A01G514100 chr3A 94.118 187 9 2 1 185 601363340 601363154 1.840000e-72 283
23 TraesCS5A01G514100 chr4A 94.536 183 9 1 1 183 8504710 8504891 6.610000e-72 281


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G514100 chr5A 677913997 677917125 3128 True 5779.0 5779 100.0000 1 3129 1 chr5A.!!$R3 3128
1 TraesCS5A01G514100 chr5A 677938988 677940277 1289 True 494.5 780 81.9360 175 949 2 chr5A.!!$R4 774
2 TraesCS5A01G514100 chr4B 638607557 638609533 1976 True 2100.0 2100 85.8810 903 2940 1 chr4B.!!$R2 2037
3 TraesCS5A01G514100 chr1A 232100633 232104025 3392 False 336.0 339 98.6775 2941 3129 2 chr1A.!!$F1 188

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
67 68 0.035820 GTGTTGCGGTATCTTGGGGA 60.036 55.0 0.0 0.0 0.00 4.81 F
118 119 0.104304 GCCATATCGGTGAACCTCGT 59.896 55.0 0.0 0.0 36.97 4.18 F
2011 2565 0.038892 TACTCAACCTCGCCAACGAC 60.039 55.0 0.0 0.0 45.12 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1053 1593 0.038159 CGAAGATCCCGTCATAGCCC 60.038 60.0 0.0 0.0 0.00 5.19 R
2095 2649 0.105039 GGTTGGCATCGAGGTAGAGG 59.895 60.0 0.0 0.0 0.00 3.69 R
2903 3457 6.627087 AAGTGATGGGATGAGAAAGTTCTA 57.373 37.5 0.0 0.0 37.73 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.529753 ACAGGTACGTGGGGGAGT 59.470 61.111 19.03 0.00 0.00 3.85
18 19 1.608627 ACAGGTACGTGGGGGAGTC 60.609 63.158 19.03 0.00 0.00 3.36
19 20 1.608336 CAGGTACGTGGGGGAGTCA 60.608 63.158 7.69 0.00 0.00 3.41
20 21 1.156803 AGGTACGTGGGGGAGTCAA 59.843 57.895 0.00 0.00 0.00 3.18
21 22 1.190178 AGGTACGTGGGGGAGTCAAC 61.190 60.000 0.00 0.00 0.00 3.18
22 23 1.080298 GTACGTGGGGGAGTCAACG 60.080 63.158 0.00 0.00 0.00 4.10
23 24 2.277591 TACGTGGGGGAGTCAACGG 61.278 63.158 0.00 0.00 0.00 4.44
25 26 3.637273 GTGGGGGAGTCAACGGCT 61.637 66.667 0.00 0.00 0.00 5.52
26 27 2.852075 TGGGGGAGTCAACGGCTT 60.852 61.111 0.00 0.00 0.00 4.35
27 28 2.359975 GGGGGAGTCAACGGCTTG 60.360 66.667 0.00 0.00 0.00 4.01
28 29 2.430367 GGGGAGTCAACGGCTTGT 59.570 61.111 0.00 0.00 0.00 3.16
29 30 1.966451 GGGGAGTCAACGGCTTGTG 60.966 63.158 0.00 0.00 0.00 3.33
30 31 2.617274 GGGAGTCAACGGCTTGTGC 61.617 63.158 0.00 0.00 38.76 4.57
60 61 3.199891 GGCCGGTGTTGCGGTATC 61.200 66.667 1.90 0.00 0.00 2.24
61 62 2.125269 GCCGGTGTTGCGGTATCT 60.125 61.111 1.90 0.00 0.00 1.98
62 63 1.743995 GCCGGTGTTGCGGTATCTT 60.744 57.895 1.90 0.00 0.00 2.40
63 64 1.977594 GCCGGTGTTGCGGTATCTTG 61.978 60.000 1.90 0.00 0.00 3.02
64 65 1.366111 CCGGTGTTGCGGTATCTTGG 61.366 60.000 0.00 0.00 0.00 3.61
65 66 1.366111 CGGTGTTGCGGTATCTTGGG 61.366 60.000 0.00 0.00 0.00 4.12
66 67 1.029947 GGTGTTGCGGTATCTTGGGG 61.030 60.000 0.00 0.00 0.00 4.96
67 68 0.035820 GTGTTGCGGTATCTTGGGGA 60.036 55.000 0.00 0.00 0.00 4.81
68 69 0.251916 TGTTGCGGTATCTTGGGGAG 59.748 55.000 0.00 0.00 0.00 4.30
69 70 0.463833 GTTGCGGTATCTTGGGGAGG 60.464 60.000 0.00 0.00 0.00 4.30
70 71 0.619255 TTGCGGTATCTTGGGGAGGA 60.619 55.000 0.00 0.00 0.00 3.71
71 72 1.048724 TGCGGTATCTTGGGGAGGAG 61.049 60.000 0.00 0.00 0.00 3.69
72 73 1.749033 CGGTATCTTGGGGAGGAGC 59.251 63.158 0.00 0.00 0.00 4.70
73 74 1.749033 GGTATCTTGGGGAGGAGCG 59.251 63.158 0.00 0.00 0.00 5.03
74 75 1.069935 GTATCTTGGGGAGGAGCGC 59.930 63.158 0.00 0.00 0.00 5.92
82 83 3.902086 GGAGGAGCGCCCGTAGTC 61.902 72.222 2.29 0.00 40.87 2.59
83 84 3.138798 GAGGAGCGCCCGTAGTCA 61.139 66.667 2.29 0.00 40.87 3.41
84 85 2.442272 AGGAGCGCCCGTAGTCAT 60.442 61.111 2.29 0.00 40.87 3.06
85 86 2.279517 GGAGCGCCCGTAGTCATG 60.280 66.667 2.29 0.00 0.00 3.07
86 87 2.962253 GAGCGCCCGTAGTCATGC 60.962 66.667 2.29 0.00 0.00 4.06
87 88 4.530857 AGCGCCCGTAGTCATGCC 62.531 66.667 2.29 0.00 0.00 4.40
88 89 4.530857 GCGCCCGTAGTCATGCCT 62.531 66.667 0.00 0.00 0.00 4.75
89 90 2.279517 CGCCCGTAGTCATGCCTC 60.280 66.667 0.00 0.00 0.00 4.70
90 91 2.279517 GCCCGTAGTCATGCCTCG 60.280 66.667 0.00 0.00 0.00 4.63
91 92 2.417516 CCCGTAGTCATGCCTCGG 59.582 66.667 7.41 7.41 40.72 4.63
92 93 2.417516 CCGTAGTCATGCCTCGGG 59.582 66.667 6.71 0.00 37.92 5.14
93 94 2.417516 CGTAGTCATGCCTCGGGG 59.582 66.667 0.00 0.00 0.00 5.73
94 95 2.125326 CGTAGTCATGCCTCGGGGA 61.125 63.158 4.80 0.00 33.58 4.81
95 96 1.464376 CGTAGTCATGCCTCGGGGAT 61.464 60.000 4.80 0.00 32.80 3.85
100 101 1.302033 CATGCCTCGGGGATGTAGC 60.302 63.158 4.80 0.00 44.72 3.58
101 102 2.520536 ATGCCTCGGGGATGTAGCC 61.521 63.158 4.80 0.00 30.96 3.93
102 103 3.161450 GCCTCGGGGATGTAGCCA 61.161 66.667 4.80 0.00 33.58 4.75
103 104 2.520536 GCCTCGGGGATGTAGCCAT 61.521 63.158 4.80 0.00 33.58 4.40
104 105 1.192146 GCCTCGGGGATGTAGCCATA 61.192 60.000 4.80 0.00 33.58 2.74
105 106 1.573108 CCTCGGGGATGTAGCCATAT 58.427 55.000 0.00 0.00 33.58 1.78
106 107 1.482593 CCTCGGGGATGTAGCCATATC 59.517 57.143 0.00 0.00 33.58 1.63
107 108 1.135139 CTCGGGGATGTAGCCATATCG 59.865 57.143 0.00 0.00 0.00 2.92
108 109 0.175760 CGGGGATGTAGCCATATCGG 59.824 60.000 0.00 0.00 38.11 4.18
109 110 1.276622 GGGGATGTAGCCATATCGGT 58.723 55.000 0.00 0.00 36.97 4.69
110 111 1.066143 GGGGATGTAGCCATATCGGTG 60.066 57.143 0.00 0.00 36.97 4.94
111 112 1.899814 GGGATGTAGCCATATCGGTGA 59.100 52.381 0.00 0.00 36.97 4.02
112 113 2.301870 GGGATGTAGCCATATCGGTGAA 59.698 50.000 0.00 0.00 36.97 3.18
113 114 3.326747 GGATGTAGCCATATCGGTGAAC 58.673 50.000 0.00 0.00 36.97 3.18
114 115 2.902705 TGTAGCCATATCGGTGAACC 57.097 50.000 0.00 0.00 36.97 3.62
115 116 2.394632 TGTAGCCATATCGGTGAACCT 58.605 47.619 0.00 0.00 36.97 3.50
116 117 2.364324 TGTAGCCATATCGGTGAACCTC 59.636 50.000 0.00 0.00 36.97 3.85
117 118 0.389391 AGCCATATCGGTGAACCTCG 59.611 55.000 0.00 0.00 36.97 4.63
118 119 0.104304 GCCATATCGGTGAACCTCGT 59.896 55.000 0.00 0.00 36.97 4.18
119 120 1.472728 GCCATATCGGTGAACCTCGTT 60.473 52.381 0.00 0.00 36.97 3.85
120 121 2.223876 GCCATATCGGTGAACCTCGTTA 60.224 50.000 0.00 0.00 36.97 3.18
121 122 3.738899 GCCATATCGGTGAACCTCGTTAA 60.739 47.826 0.00 0.00 36.97 2.01
122 123 3.800506 CCATATCGGTGAACCTCGTTAAC 59.199 47.826 0.00 0.00 0.00 2.01
123 124 4.426416 CATATCGGTGAACCTCGTTAACA 58.574 43.478 6.39 0.00 28.88 2.41
124 125 2.886862 TCGGTGAACCTCGTTAACAA 57.113 45.000 6.39 0.00 28.88 2.83
125 126 3.176552 TCGGTGAACCTCGTTAACAAA 57.823 42.857 6.39 0.00 28.88 2.83
126 127 3.731089 TCGGTGAACCTCGTTAACAAAT 58.269 40.909 6.39 0.00 28.88 2.32
127 128 4.880759 TCGGTGAACCTCGTTAACAAATA 58.119 39.130 6.39 0.00 28.88 1.40
128 129 5.481105 TCGGTGAACCTCGTTAACAAATAT 58.519 37.500 6.39 0.00 28.88 1.28
129 130 5.577945 TCGGTGAACCTCGTTAACAAATATC 59.422 40.000 6.39 0.00 28.88 1.63
130 131 5.499652 CGGTGAACCTCGTTAACAAATATCG 60.500 44.000 6.39 0.00 28.88 2.92
131 132 5.349543 GGTGAACCTCGTTAACAAATATCGT 59.650 40.000 6.39 0.00 28.88 3.73
132 133 6.531240 GGTGAACCTCGTTAACAAATATCGTA 59.469 38.462 6.39 0.00 28.88 3.43
133 134 7.386414 GTGAACCTCGTTAACAAATATCGTAC 58.614 38.462 6.39 0.00 27.94 3.67
134 135 6.531240 TGAACCTCGTTAACAAATATCGTACC 59.469 38.462 6.39 0.00 0.00 3.34
135 136 6.212888 ACCTCGTTAACAAATATCGTACCT 57.787 37.500 6.39 0.00 0.00 3.08
136 137 6.633856 ACCTCGTTAACAAATATCGTACCTT 58.366 36.000 6.39 0.00 0.00 3.50
137 138 6.532657 ACCTCGTTAACAAATATCGTACCTTG 59.467 38.462 6.39 0.00 0.00 3.61
138 139 6.019318 CCTCGTTAACAAATATCGTACCTTGG 60.019 42.308 6.39 0.00 0.00 3.61
139 140 6.397272 TCGTTAACAAATATCGTACCTTGGT 58.603 36.000 6.39 0.00 0.00 3.67
140 141 6.310956 TCGTTAACAAATATCGTACCTTGGTG 59.689 38.462 6.39 0.00 0.00 4.17
141 142 6.091169 CGTTAACAAATATCGTACCTTGGTGT 59.909 38.462 6.39 0.00 0.00 4.16
142 143 5.873179 AACAAATATCGTACCTTGGTGTG 57.127 39.130 2.03 0.00 0.00 3.82
143 144 4.901868 ACAAATATCGTACCTTGGTGTGT 58.098 39.130 2.03 0.00 0.00 3.72
144 145 4.933400 ACAAATATCGTACCTTGGTGTGTC 59.067 41.667 2.03 0.00 0.00 3.67
145 146 2.925578 TATCGTACCTTGGTGTGTCG 57.074 50.000 2.03 3.02 0.00 4.35
146 147 0.963962 ATCGTACCTTGGTGTGTCGT 59.036 50.000 2.03 0.00 0.00 4.34
147 148 0.311790 TCGTACCTTGGTGTGTCGTC 59.688 55.000 2.03 0.00 0.00 4.20
148 149 0.313043 CGTACCTTGGTGTGTCGTCT 59.687 55.000 2.03 0.00 0.00 4.18
149 150 1.536766 CGTACCTTGGTGTGTCGTCTA 59.463 52.381 2.03 0.00 0.00 2.59
150 151 2.163010 CGTACCTTGGTGTGTCGTCTAT 59.837 50.000 2.03 0.00 0.00 1.98
151 152 3.374988 CGTACCTTGGTGTGTCGTCTATA 59.625 47.826 2.03 0.00 0.00 1.31
152 153 4.142622 CGTACCTTGGTGTGTCGTCTATAA 60.143 45.833 2.03 0.00 0.00 0.98
153 154 5.449588 CGTACCTTGGTGTGTCGTCTATAAT 60.450 44.000 2.03 0.00 0.00 1.28
154 155 5.007385 ACCTTGGTGTGTCGTCTATAATC 57.993 43.478 0.00 0.00 0.00 1.75
155 156 4.710375 ACCTTGGTGTGTCGTCTATAATCT 59.290 41.667 0.00 0.00 0.00 2.40
156 157 5.187186 ACCTTGGTGTGTCGTCTATAATCTT 59.813 40.000 0.00 0.00 0.00 2.40
157 158 6.379133 ACCTTGGTGTGTCGTCTATAATCTTA 59.621 38.462 0.00 0.00 0.00 2.10
158 159 6.696148 CCTTGGTGTGTCGTCTATAATCTTAC 59.304 42.308 0.00 0.00 0.00 2.34
159 160 6.762702 TGGTGTGTCGTCTATAATCTTACA 57.237 37.500 0.00 0.00 0.00 2.41
160 161 7.342769 TGGTGTGTCGTCTATAATCTTACAT 57.657 36.000 0.00 0.00 0.00 2.29
161 162 7.778083 TGGTGTGTCGTCTATAATCTTACATT 58.222 34.615 0.00 0.00 0.00 2.71
162 163 8.905850 TGGTGTGTCGTCTATAATCTTACATTA 58.094 33.333 0.00 0.00 0.00 1.90
163 164 9.395707 GGTGTGTCGTCTATAATCTTACATTAG 57.604 37.037 0.00 0.00 0.00 1.73
164 165 8.903723 GTGTGTCGTCTATAATCTTACATTAGC 58.096 37.037 0.00 0.00 0.00 3.09
165 166 7.801783 TGTGTCGTCTATAATCTTACATTAGCG 59.198 37.037 0.00 0.00 0.00 4.26
166 167 7.802251 GTGTCGTCTATAATCTTACATTAGCGT 59.198 37.037 0.00 0.00 0.00 5.07
167 168 8.347771 TGTCGTCTATAATCTTACATTAGCGTT 58.652 33.333 0.00 0.00 0.00 4.84
168 169 9.178427 GTCGTCTATAATCTTACATTAGCGTTT 57.822 33.333 0.00 0.00 0.00 3.60
169 170 9.740239 TCGTCTATAATCTTACATTAGCGTTTT 57.260 29.630 0.00 0.00 0.00 2.43
189 190 7.547961 CGTTTTATTCTAACAGAGTATGCTCG 58.452 38.462 5.08 3.45 46.03 5.03
232 726 1.153842 CACTCTATGCACGGCGTCA 60.154 57.895 10.85 12.24 0.00 4.35
234 728 1.139734 CTCTATGCACGGCGTCACT 59.860 57.895 10.85 0.00 0.00 3.41
245 739 3.060272 CACGGCGTCACTGATGATATTTC 60.060 47.826 10.85 0.00 37.14 2.17
285 779 3.657398 TTGCTGGTCATGGATCTTGAT 57.343 42.857 0.00 0.00 0.00 2.57
356 850 7.824779 CCTTCTAAGATGTTGTAGTAGCCTTTT 59.175 37.037 0.00 0.00 0.00 2.27
374 868 5.118286 CCTTTTTGATGTGTTTTTGCTCCT 58.882 37.500 0.00 0.00 0.00 3.69
384 878 4.270808 GTGTTTTTGCTCCTGGTTGATTTG 59.729 41.667 0.00 0.00 0.00 2.32
386 880 1.631405 TTGCTCCTGGTTGATTTGGG 58.369 50.000 0.00 0.00 0.00 4.12
415 923 4.157120 GCGTGCCGGGATACACCT 62.157 66.667 2.18 0.00 38.98 4.00
434 942 0.881159 TGTTCCCGTTACGCCAACAG 60.881 55.000 13.26 0.00 36.92 3.16
439 947 1.959226 CGTTACGCCAACAGGTGCT 60.959 57.895 0.00 0.00 36.92 4.40
449 957 3.243704 GCCAACAGGTGCTGAATTTGTTA 60.244 43.478 0.00 0.00 35.18 2.41
451 959 4.202101 CCAACAGGTGCTGAATTTGTTACA 60.202 41.667 0.00 0.00 35.18 2.41
452 960 5.347342 CAACAGGTGCTGAATTTGTTACAA 58.653 37.500 0.00 0.00 35.18 2.41
463 971 8.082242 GCTGAATTTGTTACAATCTTACTTGGT 58.918 33.333 0.00 0.00 0.00 3.67
468 976 4.214545 TGTTACAATCTTACTTGGTTGCCG 59.785 41.667 0.00 0.00 0.00 5.69
549 1057 2.414138 CGGTTTTCAAAGCTACTACCCG 59.586 50.000 0.00 0.00 34.41 5.28
553 1061 5.292834 GGTTTTCAAAGCTACTACCCGATAC 59.707 44.000 0.00 0.00 33.81 2.24
598 1123 1.476007 TTTTGGGTTCGGGCAATGGG 61.476 55.000 0.00 0.00 0.00 4.00
739 1268 7.440523 ACTGCAAAAGAAAGTAGTAGATTGG 57.559 36.000 0.00 0.00 0.00 3.16
747 1276 8.974060 AAGAAAGTAGTAGATTGGTGTGAAAA 57.026 30.769 0.00 0.00 0.00 2.29
808 1337 1.332375 TCGCAAAACTAGTTGTGTGCC 59.668 47.619 27.60 11.79 38.00 5.01
813 1342 2.710096 AACTAGTTGTGTGCCTGTGT 57.290 45.000 7.48 0.00 0.00 3.72
880 1419 1.503347 ACAGACCCACCCCAATTTCTT 59.497 47.619 0.00 0.00 0.00 2.52
881 1420 2.171003 CAGACCCACCCCAATTTCTTC 58.829 52.381 0.00 0.00 0.00 2.87
882 1421 2.073776 AGACCCACCCCAATTTCTTCT 58.926 47.619 0.00 0.00 0.00 2.85
896 1435 1.069765 CTTCTATCGGCCGCACCAT 59.930 57.895 23.51 11.73 39.03 3.55
928 1468 4.441792 CACAAGTGAAAAGAAAAAGGGGG 58.558 43.478 0.00 0.00 0.00 5.40
936 1476 2.696526 AGAAAAAGGGGGAAAGGGAC 57.303 50.000 0.00 0.00 0.00 4.46
982 1522 2.681778 ACCTCCACCTCGCTCCTG 60.682 66.667 0.00 0.00 0.00 3.86
1033 1573 2.997897 AGGTGACGTCTCTGGGCC 60.998 66.667 17.92 0.00 0.00 5.80
1048 1588 1.138859 TGGGCCATGTTCAGAGTATCG 59.861 52.381 0.00 0.00 42.67 2.92
1050 1590 2.205074 GGCCATGTTCAGAGTATCGTG 58.795 52.381 0.00 0.00 42.67 4.35
1053 1593 3.553511 GCCATGTTCAGAGTATCGTGAAG 59.446 47.826 0.00 0.00 42.67 3.02
1059 1599 3.833732 TCAGAGTATCGTGAAGGGCTAT 58.166 45.455 0.00 0.00 42.67 2.97
1070 1610 1.694696 GAAGGGCTATGACGGGATCTT 59.305 52.381 0.00 0.00 0.00 2.40
1077 1617 3.671971 GCTATGACGGGATCTTCGATCTG 60.672 52.174 14.02 0.86 0.00 2.90
1078 1618 0.385751 TGACGGGATCTTCGATCTGC 59.614 55.000 14.02 0.00 0.00 4.26
1082 1622 1.742768 GGATCTTCGATCTGCCGGT 59.257 57.895 1.90 0.00 0.00 5.28
1090 1630 4.471908 ATCTGCCGGTGCGCATCA 62.472 61.111 22.51 12.31 41.78 3.07
1091 1631 3.762429 ATCTGCCGGTGCGCATCAT 62.762 57.895 22.51 2.61 41.78 2.45
1102 1642 1.302366 GCGCATCATCTCCATTGACA 58.698 50.000 0.30 0.00 0.00 3.58
1105 1645 1.607628 GCATCATCTCCATTGACAGCC 59.392 52.381 0.00 0.00 0.00 4.85
1111 1651 3.197790 CCATTGACAGCCTCCGCG 61.198 66.667 0.00 0.00 41.18 6.46
1141 1681 0.941463 GATCGTCGCCCTGCTGTATG 60.941 60.000 0.00 0.00 0.00 2.39
1147 1687 1.091771 CGCCCTGCTGTATGACAAGG 61.092 60.000 0.00 0.00 0.00 3.61
1149 1689 2.014068 GCCCTGCTGTATGACAAGGTC 61.014 57.143 0.00 0.00 26.67 3.85
1153 1693 1.002366 GCTGTATGACAAGGTCAGCG 58.998 55.000 5.25 0.00 46.04 5.18
1154 1694 1.404181 GCTGTATGACAAGGTCAGCGA 60.404 52.381 5.25 0.00 46.04 4.93
1164 1704 2.435059 GTCAGCGAGGAAGGTGGC 60.435 66.667 0.00 0.00 39.81 5.01
1201 1741 2.211468 ATTCCCCCTTCTCCAACGGC 62.211 60.000 0.00 0.00 0.00 5.68
1226 1766 0.456221 AAGCTCCATGACTACGTCCG 59.544 55.000 0.00 0.00 0.00 4.79
1231 1771 2.102357 ATGACTACGTCCGCAGCG 59.898 61.111 8.18 8.18 0.00 5.18
1272 1812 2.202453 GACTCCGCGGTCGAGAAC 60.202 66.667 27.15 11.13 38.10 3.01
1300 1845 0.532573 TGATCCGACCACAGCTTCTC 59.467 55.000 0.00 0.00 0.00 2.87
1308 1853 0.868406 CCACAGCTTCTCCGAAACAC 59.132 55.000 0.00 0.00 0.00 3.32
1335 1880 2.681778 CACCCTGGAGCTCGACCT 60.682 66.667 7.83 0.00 0.00 3.85
1336 1881 2.681778 ACCCTGGAGCTCGACCTG 60.682 66.667 7.83 0.00 0.00 4.00
1345 1890 2.795297 CTCGACCTGTCCTCGCTC 59.205 66.667 0.00 0.00 0.00 5.03
1347 1892 1.711060 CTCGACCTGTCCTCGCTCTC 61.711 65.000 0.00 0.00 0.00 3.20
1353 1898 4.200283 GTCCTCGCTCTCGGCCTG 62.200 72.222 0.00 0.00 37.74 4.85
1374 1919 3.726517 CTTCCGCACCAGGCAACG 61.727 66.667 0.00 0.00 45.17 4.10
1388 1933 3.394836 AACGCCCTCTCCCTCAGC 61.395 66.667 0.00 0.00 0.00 4.26
1452 1997 2.303549 CTGGTGGTCGAGCAGGATCC 62.304 65.000 19.24 15.84 45.05 3.36
1562 2107 4.858200 CGCCCGTCGACGACTACG 62.858 72.222 37.65 27.82 43.02 3.51
1609 2154 1.209128 ACTCTTTCAACTGCGTCACG 58.791 50.000 0.00 0.00 0.00 4.35
1610 2155 0.508641 CTCTTTCAACTGCGTCACGG 59.491 55.000 0.00 0.00 0.00 4.94
1612 2157 2.443957 CTTTCAACTGCGTCACGGCC 62.444 60.000 0.00 0.00 0.00 6.13
1625 2170 2.747855 CGGCCCTTGTTGAGAGCC 60.748 66.667 0.00 0.00 40.33 4.70
1629 2174 1.672356 CCCTTGTTGAGAGCCACGG 60.672 63.158 0.00 0.00 0.00 4.94
1648 2193 2.338984 AACGAGCTCGGTGTCCAC 59.661 61.111 36.93 0.00 44.95 4.02
1707 2252 3.429085 GCAAGGTGTTTGATCTTATGCG 58.571 45.455 0.00 0.00 39.21 4.73
1748 2293 1.003866 GATGGCGCGTATTCAACTTCC 60.004 52.381 8.43 0.00 0.00 3.46
1753 2298 2.724839 GCGCGTATTCAACTTCCAACTG 60.725 50.000 8.43 0.00 0.00 3.16
1757 2302 4.556699 GCGTATTCAACTTCCAACTGCTTT 60.557 41.667 0.00 0.00 0.00 3.51
1758 2303 4.911610 CGTATTCAACTTCCAACTGCTTTG 59.088 41.667 0.00 0.00 34.63 2.77
1766 2311 1.442567 CAACTGCTTTGGCTTGCCA 59.557 52.632 10.65 10.65 39.59 4.92
1773 2321 1.533513 TTTGGCTTGCCATCCTGCA 60.534 52.632 15.58 0.00 40.07 4.41
1775 2323 1.609635 TTGGCTTGCCATCCTGCATG 61.610 55.000 15.58 0.00 41.70 4.06
1776 2324 1.755395 GGCTTGCCATCCTGCATGA 60.755 57.895 6.79 0.00 41.70 3.07
1785 2333 0.904649 ATCCTGCATGACAACCTCGA 59.095 50.000 0.00 0.00 0.00 4.04
1792 2340 1.325640 CATGACAACCTCGATCAAGCG 59.674 52.381 0.00 0.00 0.00 4.68
1813 2361 1.297893 GCTCGGATGCGCAAACATC 60.298 57.895 17.11 7.29 44.73 3.06
1815 2363 1.695893 CTCGGATGCGCAAACATCGT 61.696 55.000 17.11 0.00 46.11 3.73
1821 2369 1.218875 TGCGCAAACATCGTCTCGTT 61.219 50.000 8.16 0.00 0.00 3.85
1825 2373 1.069906 GCAAACATCGTCTCGTTGCTT 60.070 47.619 0.00 0.00 30.84 3.91
1826 2374 2.563976 CAAACATCGTCTCGTTGCTTG 58.436 47.619 1.06 2.29 30.43 4.01
1827 2375 2.148916 AACATCGTCTCGTTGCTTGA 57.851 45.000 1.06 0.00 30.84 3.02
1831 2379 0.039437 TCGTCTCGTTGCTTGAGGAC 60.039 55.000 1.55 0.00 34.19 3.85
1837 2385 1.671742 GTTGCTTGAGGACGGGAGA 59.328 57.895 0.00 0.00 0.00 3.71
1841 2389 1.330655 GCTTGAGGACGGGAGATCCA 61.331 60.000 0.47 0.00 38.86 3.41
1847 2395 0.250081 GGACGGGAGATCCATCAAGC 60.250 60.000 0.47 0.00 36.15 4.01
1848 2396 0.755686 GACGGGAGATCCATCAAGCT 59.244 55.000 0.47 0.00 37.91 3.74
1850 2398 0.755079 CGGGAGATCCATCAAGCTCA 59.245 55.000 0.47 0.00 37.91 4.26
1851 2399 1.347050 CGGGAGATCCATCAAGCTCAT 59.653 52.381 0.47 0.00 37.91 2.90
1852 2400 2.612471 CGGGAGATCCATCAAGCTCATC 60.612 54.545 0.47 0.00 37.91 2.92
1853 2401 2.371179 GGGAGATCCATCAAGCTCATCA 59.629 50.000 0.47 0.00 37.91 3.07
1854 2402 3.181447 GGGAGATCCATCAAGCTCATCAA 60.181 47.826 0.47 0.00 37.91 2.57
1855 2403 4.066490 GGAGATCCATCAAGCTCATCAAG 58.934 47.826 0.00 0.00 35.64 3.02
1856 2404 5.572865 GGAGATCCATCAAGCTCATCAAGC 61.573 50.000 0.00 0.00 43.09 4.01
1890 2438 1.593750 GCCTCCACGCTATCAGCTG 60.594 63.158 7.63 7.63 39.60 4.24
1898 2446 1.207089 ACGCTATCAGCTGCACCTTAA 59.793 47.619 9.47 0.00 39.60 1.85
1899 2447 1.863454 CGCTATCAGCTGCACCTTAAG 59.137 52.381 9.47 0.00 39.60 1.85
1900 2448 2.481969 CGCTATCAGCTGCACCTTAAGA 60.482 50.000 9.47 0.00 39.60 2.10
1901 2449 3.129871 GCTATCAGCTGCACCTTAAGAG 58.870 50.000 9.47 0.00 38.45 2.85
1913 2467 4.677584 CACCTTAAGAGATCTTGACCTCG 58.322 47.826 3.36 0.00 37.40 4.63
1914 2468 3.702045 ACCTTAAGAGATCTTGACCTCGG 59.298 47.826 3.36 0.00 37.40 4.63
1915 2469 3.702045 CCTTAAGAGATCTTGACCTCGGT 59.298 47.826 3.36 0.00 37.40 4.69
1916 2470 4.202070 CCTTAAGAGATCTTGACCTCGGTC 60.202 50.000 9.15 9.15 44.77 4.79
1917 2471 1.770294 AGAGATCTTGACCTCGGTCC 58.230 55.000 13.22 0.00 43.97 4.46
1921 2475 1.679153 GATCTTGACCTCGGTCCTCTC 59.321 57.143 13.22 2.32 43.97 3.20
1931 2485 4.459089 GTCCTCTCGCCACCTGCC 62.459 72.222 0.00 0.00 36.24 4.85
1963 2517 4.785453 GGTGCCTGGCTTCCCGAG 62.785 72.222 21.03 0.00 0.00 4.63
1971 2525 4.388499 GCTTCCCGAGGCCGTGAA 62.388 66.667 0.00 0.00 31.72 3.18
1973 2527 3.234630 CTTCCCGAGGCCGTGAACA 62.235 63.158 0.00 0.00 29.62 3.18
1974 2528 2.521958 CTTCCCGAGGCCGTGAACAT 62.522 60.000 0.00 0.00 29.62 2.71
1975 2529 2.796483 TTCCCGAGGCCGTGAACATG 62.796 60.000 0.00 0.00 27.66 3.21
1977 2531 2.434884 CGAGGCCGTGAACATGCT 60.435 61.111 0.00 0.00 0.00 3.79
1978 2532 2.034879 CGAGGCCGTGAACATGCTT 61.035 57.895 0.00 0.00 0.00 3.91
1979 2533 1.503542 GAGGCCGTGAACATGCTTG 59.496 57.895 0.00 0.00 0.00 4.01
1983 2537 1.497278 CCGTGAACATGCTTGTCCG 59.503 57.895 5.61 8.65 34.06 4.79
1985 2539 0.110688 CGTGAACATGCTTGTCCGTG 60.111 55.000 5.61 0.00 34.06 4.94
1989 2543 1.172180 AACATGCTTGTCCGTGGTGG 61.172 55.000 5.61 0.00 34.06 4.61
1994 2548 0.669625 GCTTGTCCGTGGTGGTCTAC 60.670 60.000 0.00 0.00 39.52 2.59
1997 2551 0.178984 TGTCCGTGGTGGTCTACTCA 60.179 55.000 0.00 0.00 39.52 3.41
2007 2561 0.606604 GGTCTACTCAACCTCGCCAA 59.393 55.000 0.00 0.00 33.78 4.52
2008 2562 1.672145 GGTCTACTCAACCTCGCCAAC 60.672 57.143 0.00 0.00 33.78 3.77
2011 2565 0.038892 TACTCAACCTCGCCAACGAC 60.039 55.000 0.00 0.00 45.12 4.34
2012 2566 2.027625 CTCAACCTCGCCAACGACC 61.028 63.158 0.00 0.00 45.12 4.79
2014 2568 1.597027 CAACCTCGCCAACGACCTT 60.597 57.895 0.00 0.00 45.12 3.50
2016 2570 0.393820 AACCTCGCCAACGACCTTAA 59.606 50.000 0.00 0.00 45.12 1.85
2020 2574 2.385091 CGCCAACGACCTTAACCGG 61.385 63.158 0.00 0.00 43.93 5.28
2021 2575 2.036571 GCCAACGACCTTAACCGGG 61.037 63.158 6.32 0.00 0.00 5.73
2027 2581 1.538687 CGACCTTAACCGGGGAGTGT 61.539 60.000 6.32 0.00 0.00 3.55
2028 2582 0.689055 GACCTTAACCGGGGAGTGTT 59.311 55.000 6.32 0.00 0.00 3.32
2030 2584 1.072806 ACCTTAACCGGGGAGTGTTTC 59.927 52.381 6.32 0.00 0.00 2.78
2031 2585 1.435577 CTTAACCGGGGAGTGTTTCG 58.564 55.000 6.32 0.00 0.00 3.46
2040 2594 1.630148 GGAGTGTTTCGTCCTGATCG 58.370 55.000 0.00 0.00 0.00 3.69
2041 2595 1.067776 GGAGTGTTTCGTCCTGATCGT 60.068 52.381 0.00 0.00 0.00 3.73
2042 2596 2.609737 GGAGTGTTTCGTCCTGATCGTT 60.610 50.000 0.00 0.00 0.00 3.85
2043 2597 3.366679 GGAGTGTTTCGTCCTGATCGTTA 60.367 47.826 0.00 0.00 0.00 3.18
2045 2599 2.340577 GTGTTTCGTCCTGATCGTTACG 59.659 50.000 0.00 0.00 36.71 3.18
2048 2602 0.729116 TCGTCCTGATCGTTACGACC 59.271 55.000 10.39 0.00 39.25 4.79
2052 2606 0.591741 CCTGATCGTTACGACCTCGC 60.592 60.000 10.39 0.00 44.43 5.03
2059 2613 2.330372 TTACGACCTCGCGCAGACT 61.330 57.895 8.75 0.00 44.43 3.24
2062 2616 2.505118 GACCTCGCGCAGACTGTC 60.505 66.667 8.75 9.33 0.00 3.51
2069 2623 3.114616 CGCAGACTGTCGCCCAAG 61.115 66.667 15.34 2.54 0.00 3.61
2071 2625 2.029844 GCAGACTGTCGCCCAAGAC 61.030 63.158 3.99 0.00 41.30 3.01
2076 2630 3.372123 TGTCGCCCAAGACATCGA 58.628 55.556 0.00 0.00 45.18 3.59
2077 2631 1.080093 TGTCGCCCAAGACATCGAC 60.080 57.895 6.67 6.67 45.18 4.20
2078 2632 1.810030 GTCGCCCAAGACATCGACC 60.810 63.158 2.61 0.00 43.67 4.79
2079 2633 1.982395 TCGCCCAAGACATCGACCT 60.982 57.895 0.00 0.00 0.00 3.85
2080 2634 1.519455 CGCCCAAGACATCGACCTC 60.519 63.158 0.00 0.00 0.00 3.85
2081 2635 1.901085 GCCCAAGACATCGACCTCT 59.099 57.895 0.00 0.00 0.00 3.69
2082 2636 0.250513 GCCCAAGACATCGACCTCTT 59.749 55.000 0.00 0.00 0.00 2.85
2083 2637 1.740718 GCCCAAGACATCGACCTCTTC 60.741 57.143 3.87 0.00 0.00 2.87
2084 2638 1.134670 CCCAAGACATCGACCTCTTCC 60.135 57.143 3.87 0.00 0.00 3.46
2085 2639 1.827969 CCAAGACATCGACCTCTTCCT 59.172 52.381 3.87 0.00 0.00 3.36
2086 2640 2.159170 CCAAGACATCGACCTCTTCCTC 60.159 54.545 3.87 0.00 0.00 3.71
2087 2641 2.493675 CAAGACATCGACCTCTTCCTCA 59.506 50.000 3.87 0.00 0.00 3.86
2088 2642 2.808919 AGACATCGACCTCTTCCTCAA 58.191 47.619 0.00 0.00 0.00 3.02
2089 2643 2.494073 AGACATCGACCTCTTCCTCAAC 59.506 50.000 0.00 0.00 0.00 3.18
2090 2644 2.231478 GACATCGACCTCTTCCTCAACA 59.769 50.000 0.00 0.00 0.00 3.33
2091 2645 2.834549 ACATCGACCTCTTCCTCAACAT 59.165 45.455 0.00 0.00 0.00 2.71
2092 2646 3.193263 CATCGACCTCTTCCTCAACATG 58.807 50.000 0.00 0.00 0.00 3.21
2093 2647 1.066858 TCGACCTCTTCCTCAACATGC 60.067 52.381 0.00 0.00 0.00 4.06
2094 2648 1.338105 CGACCTCTTCCTCAACATGCA 60.338 52.381 0.00 0.00 0.00 3.96
2095 2649 2.079925 GACCTCTTCCTCAACATGCAC 58.920 52.381 0.00 0.00 0.00 4.57
2096 2650 1.271597 ACCTCTTCCTCAACATGCACC 60.272 52.381 0.00 0.00 0.00 5.01
2097 2651 1.004044 CCTCTTCCTCAACATGCACCT 59.996 52.381 0.00 0.00 0.00 4.00
2098 2652 2.354259 CTCTTCCTCAACATGCACCTC 58.646 52.381 0.00 0.00 0.00 3.85
2107 2661 1.781786 ACATGCACCTCTACCTCGAT 58.218 50.000 0.00 0.00 0.00 3.59
2144 2698 2.035066 GGCTGATGCAGTTGTTGTTTCT 59.965 45.455 0.00 0.00 41.91 2.52
2145 2699 3.491447 GGCTGATGCAGTTGTTGTTTCTT 60.491 43.478 0.00 0.00 41.91 2.52
2146 2700 3.488310 GCTGATGCAGTTGTTGTTTCTTG 59.512 43.478 0.00 0.00 39.41 3.02
2147 2701 4.675510 CTGATGCAGTTGTTGTTTCTTGT 58.324 39.130 0.00 0.00 0.00 3.16
2148 2702 5.733091 GCTGATGCAGTTGTTGTTTCTTGTA 60.733 40.000 0.00 0.00 39.41 2.41
2149 2703 5.820131 TGATGCAGTTGTTGTTTCTTGTAG 58.180 37.500 0.00 0.00 0.00 2.74
2150 2704 5.588246 TGATGCAGTTGTTGTTTCTTGTAGA 59.412 36.000 0.00 0.00 0.00 2.59
2151 2705 5.484173 TGCAGTTGTTGTTTCTTGTAGAG 57.516 39.130 0.00 0.00 0.00 2.43
2152 2706 4.941263 TGCAGTTGTTGTTTCTTGTAGAGT 59.059 37.500 0.00 0.00 0.00 3.24
2163 2717 7.959175 TGTTTCTTGTAGAGTTGTAGTACCAT 58.041 34.615 0.00 0.00 0.00 3.55
2177 2731 4.402056 AGTACCATCCGTATGTGGAAAG 57.598 45.455 0.00 0.00 42.46 2.62
2179 2733 3.992943 ACCATCCGTATGTGGAAAGAA 57.007 42.857 0.00 0.00 42.46 2.52
2180 2734 4.295141 ACCATCCGTATGTGGAAAGAAA 57.705 40.909 0.00 0.00 42.46 2.52
2194 2748 7.267128 TGTGGAAAGAAAATCATATTGCCATC 58.733 34.615 0.00 0.00 0.00 3.51
2220 2774 9.317936 CTCATCATTAAGCACATTTGTAGTCTA 57.682 33.333 0.00 0.00 0.00 2.59
2248 2802 4.346418 AGTTCCATAACCATTTGCCACAAA 59.654 37.500 0.00 0.00 36.15 2.83
2285 2839 2.034053 TGAATTTCGTTTCACTGGGTGC 59.966 45.455 0.00 0.00 32.98 5.01
2287 2841 1.021202 TTTCGTTTCACTGGGTGCTG 58.979 50.000 0.00 0.00 32.98 4.41
2332 2886 5.104735 ACCAGATAAGGACACCTGAGAATTC 60.105 44.000 0.00 0.00 32.13 2.17
2350 2904 5.248477 AGAATTCACTGTCCTACTTTGCCTA 59.752 40.000 8.44 0.00 0.00 3.93
2360 2914 6.206634 TGTCCTACTTTGCCTATTGTTTTCAG 59.793 38.462 0.00 0.00 0.00 3.02
2368 2922 5.587289 TGCCTATTGTTTTCAGTGTGTTTC 58.413 37.500 0.00 0.00 0.00 2.78
2422 2976 4.158764 CCTAGCACTTAGTGAAGCACTAGT 59.841 45.833 17.40 0.00 45.83 2.57
2423 2977 5.357314 CCTAGCACTTAGTGAAGCACTAGTA 59.643 44.000 17.40 0.00 45.83 1.82
2483 3037 9.953565 AATTAACAGATAGTTGCAAGGTAGTTA 57.046 29.630 0.00 2.40 41.50 2.24
2499 3053 5.820947 AGGTAGTTACGCCCATATTTGAAAG 59.179 40.000 0.00 0.00 0.00 2.62
2500 3054 4.632538 AGTTACGCCCATATTTGAAAGC 57.367 40.909 0.00 0.00 0.00 3.51
2533 3087 2.290093 GCTGCCTCATTACTTCATCTGC 59.710 50.000 0.00 0.00 0.00 4.26
2537 3091 3.243002 GCCTCATTACTTCATCTGCAAGC 60.243 47.826 0.00 0.00 0.00 4.01
2538 3092 3.943381 CCTCATTACTTCATCTGCAAGCA 59.057 43.478 0.00 0.00 0.00 3.91
2540 3094 4.325972 TCATTACTTCATCTGCAAGCACA 58.674 39.130 0.00 0.00 0.00 4.57
2541 3095 4.945543 TCATTACTTCATCTGCAAGCACAT 59.054 37.500 0.00 0.00 0.00 3.21
2543 3097 3.069079 ACTTCATCTGCAAGCACATCT 57.931 42.857 0.00 0.00 0.00 2.90
2544 3098 2.747989 ACTTCATCTGCAAGCACATCTG 59.252 45.455 0.00 0.00 0.00 2.90
2545 3099 2.484742 TCATCTGCAAGCACATCTGT 57.515 45.000 0.00 0.00 0.00 3.41
2546 3100 3.615224 TCATCTGCAAGCACATCTGTA 57.385 42.857 0.00 0.00 0.00 2.74
2547 3101 3.528532 TCATCTGCAAGCACATCTGTAG 58.471 45.455 0.00 0.00 0.00 2.74
2548 3102 3.055602 TCATCTGCAAGCACATCTGTAGT 60.056 43.478 0.00 0.00 0.00 2.73
2550 3104 2.564504 TCTGCAAGCACATCTGTAGTCT 59.435 45.455 0.00 0.00 0.00 3.24
2551 3105 2.671888 CTGCAAGCACATCTGTAGTCTG 59.328 50.000 0.00 0.00 0.00 3.51
2552 3106 2.005451 GCAAGCACATCTGTAGTCTGG 58.995 52.381 0.00 0.00 0.00 3.86
2555 3109 2.813907 AGCACATCTGTAGTCTGGACT 58.186 47.619 8.36 8.36 45.02 3.85
2557 3111 3.951037 AGCACATCTGTAGTCTGGACTAG 59.049 47.826 10.32 3.01 43.84 2.57
2558 3112 3.490078 GCACATCTGTAGTCTGGACTAGC 60.490 52.174 10.32 5.67 43.84 3.42
2560 3114 4.400884 CACATCTGTAGTCTGGACTAGCTT 59.599 45.833 10.32 0.00 43.84 3.74
2562 3116 4.302559 TCTGTAGTCTGGACTAGCTTCA 57.697 45.455 10.32 5.08 43.84 3.02
2563 3117 4.861196 TCTGTAGTCTGGACTAGCTTCAT 58.139 43.478 10.32 0.00 43.84 2.57
2564 3118 6.002653 TCTGTAGTCTGGACTAGCTTCATA 57.997 41.667 10.32 0.00 43.84 2.15
2565 3119 6.424032 TCTGTAGTCTGGACTAGCTTCATAA 58.576 40.000 10.32 0.00 43.84 1.90
2566 3120 6.319152 TCTGTAGTCTGGACTAGCTTCATAAC 59.681 42.308 10.32 0.33 43.84 1.89
2567 3121 5.949952 TGTAGTCTGGACTAGCTTCATAACA 59.050 40.000 10.32 2.69 43.84 2.41
2568 3122 6.436218 TGTAGTCTGGACTAGCTTCATAACAA 59.564 38.462 10.32 0.00 43.84 2.83
2569 3123 5.971763 AGTCTGGACTAGCTTCATAACAAG 58.028 41.667 0.95 0.00 40.43 3.16
2570 3124 5.482175 AGTCTGGACTAGCTTCATAACAAGT 59.518 40.000 0.95 0.00 40.43 3.16
2571 3125 5.578727 GTCTGGACTAGCTTCATAACAAGTG 59.421 44.000 0.00 0.00 0.00 3.16
2572 3126 4.253685 TGGACTAGCTTCATAACAAGTGC 58.746 43.478 0.00 0.00 0.00 4.40
2573 3127 3.623510 GGACTAGCTTCATAACAAGTGCC 59.376 47.826 0.00 0.00 0.00 5.01
2574 3128 4.253685 GACTAGCTTCATAACAAGTGCCA 58.746 43.478 0.00 0.00 0.00 4.92
2577 3131 3.424703 AGCTTCATAACAAGTGCCACAT 58.575 40.909 0.00 0.00 0.00 3.21
2586 3140 9.674068 TCATAACAAGTGCCACATATTTAGTTA 57.326 29.630 0.00 0.00 0.00 2.24
2608 3162 8.796475 AGTTAGTTGAATTACATTTGACTGCAT 58.204 29.630 0.00 0.00 0.00 3.96
2609 3163 8.853345 GTTAGTTGAATTACATTTGACTGCATG 58.147 33.333 0.00 0.00 0.00 4.06
2645 3199 4.007659 CACCGCCTTAACCAGATAGTTTT 58.992 43.478 0.00 0.00 0.00 2.43
2655 3209 9.449719 CTTAACCAGATAGTTTTCATACCTTGT 57.550 33.333 0.00 0.00 0.00 3.16
2676 3230 8.834465 CCTTGTGAATTTCATTATCCTACTCTG 58.166 37.037 1.78 0.00 0.00 3.35
2678 3232 6.767902 TGTGAATTTCATTATCCTACTCTGCC 59.232 38.462 1.78 0.00 0.00 4.85
2679 3233 6.205658 GTGAATTTCATTATCCTACTCTGCCC 59.794 42.308 1.78 0.00 0.00 5.36
2683 3237 5.912149 TCATTATCCTACTCTGCCCATTT 57.088 39.130 0.00 0.00 0.00 2.32
2754 3308 6.233430 TCACTAACGAAGTACTAGTGTGAC 57.767 41.667 17.98 0.00 46.26 3.67
2761 3315 4.384846 CGAAGTACTAGTGTGACGCAAAAT 59.615 41.667 5.39 0.00 0.00 1.82
2766 3320 3.990469 ACTAGTGTGACGCAAAATCTGAG 59.010 43.478 0.00 0.00 0.00 3.35
2769 3323 0.804989 GTGACGCAAAATCTGAGGGG 59.195 55.000 0.00 0.00 0.00 4.79
2825 3379 9.491675 TTTCGTGTTCATACAGTTCCTTTTATA 57.508 29.630 0.00 0.00 34.24 0.98
3107 6865 2.292828 AGTTTGTTAGCAGCCCATGT 57.707 45.000 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.608627 GACTCCCCCACGTACCTGT 60.609 63.158 0.00 0.00 0.00 4.00
1 2 1.189524 TTGACTCCCCCACGTACCTG 61.190 60.000 0.00 0.00 0.00 4.00
3 4 1.294459 GTTGACTCCCCCACGTACC 59.706 63.158 0.00 0.00 0.00 3.34
5 6 2.277591 CCGTTGACTCCCCCACGTA 61.278 63.158 0.00 0.00 0.00 3.57
6 7 3.622826 CCGTTGACTCCCCCACGT 61.623 66.667 0.00 0.00 0.00 4.49
8 9 3.192103 AAGCCGTTGACTCCCCCAC 62.192 63.158 0.00 0.00 0.00 4.61
9 10 2.852075 AAGCCGTTGACTCCCCCA 60.852 61.111 0.00 0.00 0.00 4.96
10 11 2.359975 CAAGCCGTTGACTCCCCC 60.360 66.667 0.00 0.00 35.46 5.40
11 12 1.966451 CACAAGCCGTTGACTCCCC 60.966 63.158 0.00 0.00 37.10 4.81
12 13 2.617274 GCACAAGCCGTTGACTCCC 61.617 63.158 0.00 0.00 37.10 4.30
13 14 2.946762 GCACAAGCCGTTGACTCC 59.053 61.111 0.00 0.00 37.10 3.85
46 47 1.366111 CCCAAGATACCGCAACACCG 61.366 60.000 0.00 0.00 0.00 4.94
47 48 1.029947 CCCCAAGATACCGCAACACC 61.030 60.000 0.00 0.00 0.00 4.16
48 49 0.035820 TCCCCAAGATACCGCAACAC 60.036 55.000 0.00 0.00 0.00 3.32
49 50 0.251916 CTCCCCAAGATACCGCAACA 59.748 55.000 0.00 0.00 0.00 3.33
50 51 0.463833 CCTCCCCAAGATACCGCAAC 60.464 60.000 0.00 0.00 0.00 4.17
51 52 0.619255 TCCTCCCCAAGATACCGCAA 60.619 55.000 0.00 0.00 0.00 4.85
52 53 1.002403 TCCTCCCCAAGATACCGCA 59.998 57.895 0.00 0.00 0.00 5.69
53 54 1.749033 CTCCTCCCCAAGATACCGC 59.251 63.158 0.00 0.00 0.00 5.68
54 55 1.749033 GCTCCTCCCCAAGATACCG 59.251 63.158 0.00 0.00 0.00 4.02
55 56 1.749033 CGCTCCTCCCCAAGATACC 59.251 63.158 0.00 0.00 0.00 2.73
56 57 1.069935 GCGCTCCTCCCCAAGATAC 59.930 63.158 0.00 0.00 0.00 2.24
57 58 2.140792 GGCGCTCCTCCCCAAGATA 61.141 63.158 7.64 0.00 0.00 1.98
58 59 3.483869 GGCGCTCCTCCCCAAGAT 61.484 66.667 7.64 0.00 0.00 2.40
65 66 3.902086 GACTACGGGCGCTCCTCC 61.902 72.222 7.64 0.00 0.00 4.30
66 67 2.491022 ATGACTACGGGCGCTCCTC 61.491 63.158 7.64 1.25 0.00 3.71
67 68 2.442272 ATGACTACGGGCGCTCCT 60.442 61.111 7.64 0.00 0.00 3.69
68 69 2.279517 CATGACTACGGGCGCTCC 60.280 66.667 7.64 6.04 0.00 4.70
69 70 2.962253 GCATGACTACGGGCGCTC 60.962 66.667 7.64 0.06 0.00 5.03
70 71 4.530857 GGCATGACTACGGGCGCT 62.531 66.667 7.64 0.00 0.00 5.92
71 72 4.530857 AGGCATGACTACGGGCGC 62.531 66.667 0.00 0.00 0.00 6.53
72 73 2.279517 GAGGCATGACTACGGGCG 60.280 66.667 0.00 0.00 0.00 6.13
73 74 2.279517 CGAGGCATGACTACGGGC 60.280 66.667 0.00 0.00 0.00 6.13
74 75 2.417516 CCGAGGCATGACTACGGG 59.582 66.667 23.89 13.32 39.92 5.28
75 76 2.417516 CCCGAGGCATGACTACGG 59.582 66.667 24.38 24.38 42.67 4.02
76 77 1.464376 ATCCCCGAGGCATGACTACG 61.464 60.000 0.00 7.28 0.00 3.51
77 78 0.034059 CATCCCCGAGGCATGACTAC 59.966 60.000 0.00 0.00 0.00 2.73
78 79 0.398522 ACATCCCCGAGGCATGACTA 60.399 55.000 0.00 0.00 0.00 2.59
79 80 0.398522 TACATCCCCGAGGCATGACT 60.399 55.000 0.00 0.00 0.00 3.41
80 81 0.034059 CTACATCCCCGAGGCATGAC 59.966 60.000 0.00 0.00 0.00 3.06
81 82 1.758440 GCTACATCCCCGAGGCATGA 61.758 60.000 0.00 0.00 0.00 3.07
82 83 1.302033 GCTACATCCCCGAGGCATG 60.302 63.158 0.00 0.00 0.00 4.06
83 84 2.520536 GGCTACATCCCCGAGGCAT 61.521 63.158 0.00 0.00 35.89 4.40
84 85 3.161450 GGCTACATCCCCGAGGCA 61.161 66.667 0.00 0.00 35.89 4.75
85 86 1.192146 TATGGCTACATCCCCGAGGC 61.192 60.000 0.00 0.00 38.53 4.70
86 87 1.482593 GATATGGCTACATCCCCGAGG 59.517 57.143 0.00 0.00 38.53 4.63
87 88 1.135139 CGATATGGCTACATCCCCGAG 59.865 57.143 0.00 0.00 38.53 4.63
88 89 1.182667 CGATATGGCTACATCCCCGA 58.817 55.000 0.00 0.00 38.53 5.14
89 90 0.175760 CCGATATGGCTACATCCCCG 59.824 60.000 0.00 0.00 38.53 5.73
90 91 1.066143 CACCGATATGGCTACATCCCC 60.066 57.143 0.00 0.00 43.94 4.81
91 92 1.899814 TCACCGATATGGCTACATCCC 59.100 52.381 0.00 0.00 43.94 3.85
92 93 3.326747 GTTCACCGATATGGCTACATCC 58.673 50.000 0.00 0.00 43.94 3.51
93 94 3.006967 AGGTTCACCGATATGGCTACATC 59.993 47.826 0.00 0.00 43.94 3.06
94 95 2.972713 AGGTTCACCGATATGGCTACAT 59.027 45.455 0.00 0.00 43.94 2.29
95 96 2.364324 GAGGTTCACCGATATGGCTACA 59.636 50.000 0.00 0.00 43.94 2.74
96 97 2.607282 CGAGGTTCACCGATATGGCTAC 60.607 54.545 0.00 0.00 43.94 3.58
97 98 1.611977 CGAGGTTCACCGATATGGCTA 59.388 52.381 0.00 0.00 43.94 3.93
98 99 0.389391 CGAGGTTCACCGATATGGCT 59.611 55.000 0.00 0.00 43.94 4.75
99 100 0.104304 ACGAGGTTCACCGATATGGC 59.896 55.000 0.00 0.00 43.94 4.40
100 101 2.596904 AACGAGGTTCACCGATATGG 57.403 50.000 0.00 0.00 46.41 2.74
101 102 4.426416 TGTTAACGAGGTTCACCGATATG 58.574 43.478 0.26 0.00 42.08 1.78
102 103 4.724074 TGTTAACGAGGTTCACCGATAT 57.276 40.909 0.26 0.00 42.08 1.63
103 104 4.517952 TTGTTAACGAGGTTCACCGATA 57.482 40.909 0.26 0.00 42.08 2.92
104 105 3.389925 TTGTTAACGAGGTTCACCGAT 57.610 42.857 0.26 0.00 42.08 4.18
105 106 2.886862 TTGTTAACGAGGTTCACCGA 57.113 45.000 0.26 0.00 42.08 4.69
106 107 5.499652 CGATATTTGTTAACGAGGTTCACCG 60.500 44.000 0.26 0.00 42.08 4.94
107 108 5.349543 ACGATATTTGTTAACGAGGTTCACC 59.650 40.000 0.26 0.00 31.22 4.02
108 109 6.399204 ACGATATTTGTTAACGAGGTTCAC 57.601 37.500 0.26 0.00 31.22 3.18
109 110 6.531240 GGTACGATATTTGTTAACGAGGTTCA 59.469 38.462 0.26 0.00 31.22 3.18
110 111 6.753744 AGGTACGATATTTGTTAACGAGGTTC 59.246 38.462 0.26 0.00 31.22 3.62
111 112 6.633856 AGGTACGATATTTGTTAACGAGGTT 58.366 36.000 0.26 0.00 31.22 3.50
112 113 6.212888 AGGTACGATATTTGTTAACGAGGT 57.787 37.500 0.26 0.00 31.22 3.85
113 114 6.019318 CCAAGGTACGATATTTGTTAACGAGG 60.019 42.308 0.26 0.00 31.22 4.63
114 115 6.532657 ACCAAGGTACGATATTTGTTAACGAG 59.467 38.462 0.26 0.00 31.22 4.18
115 116 6.310956 CACCAAGGTACGATATTTGTTAACGA 59.689 38.462 0.26 0.00 31.22 3.85
116 117 6.091169 ACACCAAGGTACGATATTTGTTAACG 59.909 38.462 0.26 0.00 32.80 3.18
117 118 7.095102 ACACACCAAGGTACGATATTTGTTAAC 60.095 37.037 0.00 0.00 0.00 2.01
118 119 6.935771 ACACACCAAGGTACGATATTTGTTAA 59.064 34.615 0.00 0.00 0.00 2.01
119 120 6.465948 ACACACCAAGGTACGATATTTGTTA 58.534 36.000 0.00 0.00 0.00 2.41
120 121 5.310451 ACACACCAAGGTACGATATTTGTT 58.690 37.500 0.00 0.00 0.00 2.83
121 122 4.901868 ACACACCAAGGTACGATATTTGT 58.098 39.130 0.00 0.00 0.00 2.83
122 123 4.032445 CGACACACCAAGGTACGATATTTG 59.968 45.833 0.00 0.00 0.00 2.32
123 124 4.178540 CGACACACCAAGGTACGATATTT 58.821 43.478 0.00 0.00 0.00 1.40
124 125 3.194116 ACGACACACCAAGGTACGATATT 59.806 43.478 11.80 0.00 0.00 1.28
125 126 2.756760 ACGACACACCAAGGTACGATAT 59.243 45.455 11.80 0.00 0.00 1.63
126 127 2.161855 ACGACACACCAAGGTACGATA 58.838 47.619 11.80 0.00 0.00 2.92
127 128 0.963962 ACGACACACCAAGGTACGAT 59.036 50.000 11.80 0.00 0.00 3.73
128 129 0.311790 GACGACACACCAAGGTACGA 59.688 55.000 11.80 0.00 0.00 3.43
129 130 0.313043 AGACGACACACCAAGGTACG 59.687 55.000 0.00 0.00 0.00 3.67
130 131 3.863142 ATAGACGACACACCAAGGTAC 57.137 47.619 0.00 0.00 0.00 3.34
131 132 5.889853 AGATTATAGACGACACACCAAGGTA 59.110 40.000 0.00 0.00 0.00 3.08
132 133 4.710375 AGATTATAGACGACACACCAAGGT 59.290 41.667 0.00 0.00 0.00 3.50
133 134 5.263968 AGATTATAGACGACACACCAAGG 57.736 43.478 0.00 0.00 0.00 3.61
134 135 7.255569 TGTAAGATTATAGACGACACACCAAG 58.744 38.462 0.00 0.00 0.00 3.61
135 136 7.160547 TGTAAGATTATAGACGACACACCAA 57.839 36.000 0.00 0.00 0.00 3.67
136 137 6.762702 TGTAAGATTATAGACGACACACCA 57.237 37.500 0.00 0.00 0.00 4.17
137 138 9.395707 CTAATGTAAGATTATAGACGACACACC 57.604 37.037 0.00 0.00 0.00 4.16
138 139 8.903723 GCTAATGTAAGATTATAGACGACACAC 58.096 37.037 0.00 0.00 0.00 3.82
139 140 7.801783 CGCTAATGTAAGATTATAGACGACACA 59.198 37.037 0.00 0.00 0.00 3.72
140 141 7.802251 ACGCTAATGTAAGATTATAGACGACAC 59.198 37.037 0.00 0.00 0.00 3.67
141 142 7.868775 ACGCTAATGTAAGATTATAGACGACA 58.131 34.615 0.00 0.00 0.00 4.35
142 143 8.725212 AACGCTAATGTAAGATTATAGACGAC 57.275 34.615 0.00 0.00 0.00 4.34
143 144 9.740239 AAAACGCTAATGTAAGATTATAGACGA 57.260 29.630 0.00 0.00 0.00 4.20
156 157 9.865321 ACTCTGTTAGAATAAAACGCTAATGTA 57.135 29.630 0.00 0.00 0.00 2.29
157 158 8.773404 ACTCTGTTAGAATAAAACGCTAATGT 57.227 30.769 0.00 0.00 0.00 2.71
160 161 8.814235 GCATACTCTGTTAGAATAAAACGCTAA 58.186 33.333 0.00 0.00 0.00 3.09
161 162 8.195436 AGCATACTCTGTTAGAATAAAACGCTA 58.805 33.333 0.00 0.00 0.00 4.26
162 163 7.042335 AGCATACTCTGTTAGAATAAAACGCT 58.958 34.615 0.00 0.00 0.00 5.07
163 164 7.235430 AGCATACTCTGTTAGAATAAAACGC 57.765 36.000 0.00 0.00 0.00 4.84
164 165 7.547961 CGAGCATACTCTGTTAGAATAAAACG 58.452 38.462 0.00 0.00 41.09 3.60
165 166 7.222999 AGCGAGCATACTCTGTTAGAATAAAAC 59.777 37.037 0.00 0.00 41.09 2.43
166 167 7.265673 AGCGAGCATACTCTGTTAGAATAAAA 58.734 34.615 0.00 0.00 41.09 1.52
167 168 6.806751 AGCGAGCATACTCTGTTAGAATAAA 58.193 36.000 0.00 0.00 41.09 1.40
168 169 6.392625 AGCGAGCATACTCTGTTAGAATAA 57.607 37.500 0.00 0.00 41.09 1.40
169 170 7.135089 CTAGCGAGCATACTCTGTTAGAATA 57.865 40.000 0.00 0.00 41.09 1.75
170 171 4.927978 AGCGAGCATACTCTGTTAGAAT 57.072 40.909 0.00 0.00 41.09 2.40
171 172 5.425577 CTAGCGAGCATACTCTGTTAGAA 57.574 43.478 0.00 0.00 41.09 2.10
225 719 2.476619 GGAAATATCATCAGTGACGCCG 59.523 50.000 0.00 0.00 37.14 6.46
227 721 4.811024 TGAAGGAAATATCATCAGTGACGC 59.189 41.667 0.00 0.00 37.14 5.19
232 726 6.319048 ACCAGTGAAGGAAATATCATCAGT 57.681 37.500 0.00 0.00 30.84 3.41
234 728 7.720957 CCAATACCAGTGAAGGAAATATCATCA 59.279 37.037 0.00 0.00 0.00 3.07
245 739 4.096984 GCAAAGATCCAATACCAGTGAAGG 59.903 45.833 0.00 0.00 0.00 3.46
322 816 9.482175 ACTACAACATCTTAGAAGGAGTCTAAT 57.518 33.333 0.00 0.00 45.72 1.73
336 830 7.448469 ACATCAAAAAGGCTACTACAACATCTT 59.552 33.333 0.00 0.00 0.00 2.40
337 831 6.942576 ACATCAAAAAGGCTACTACAACATCT 59.057 34.615 0.00 0.00 0.00 2.90
338 832 7.023575 CACATCAAAAAGGCTACTACAACATC 58.976 38.462 0.00 0.00 0.00 3.06
339 833 6.490040 ACACATCAAAAAGGCTACTACAACAT 59.510 34.615 0.00 0.00 0.00 2.71
340 834 5.825679 ACACATCAAAAAGGCTACTACAACA 59.174 36.000 0.00 0.00 0.00 3.33
341 835 6.313744 ACACATCAAAAAGGCTACTACAAC 57.686 37.500 0.00 0.00 0.00 3.32
342 836 6.952773 AACACATCAAAAAGGCTACTACAA 57.047 33.333 0.00 0.00 0.00 2.41
346 840 5.523552 GCAAAAACACATCAAAAAGGCTACT 59.476 36.000 0.00 0.00 0.00 2.57
356 850 3.030291 ACCAGGAGCAAAAACACATCAA 58.970 40.909 0.00 0.00 0.00 2.57
374 868 1.535202 GGGCCACCCAAATCAACCA 60.535 57.895 4.39 0.00 44.65 3.67
415 923 0.881159 CTGTTGGCGTAACGGGAACA 60.881 55.000 5.84 0.00 42.34 3.18
434 942 7.593825 AGTAAGATTGTAACAAATTCAGCACC 58.406 34.615 0.00 0.00 0.00 5.01
439 947 9.743057 CAACCAAGTAAGATTGTAACAAATTCA 57.257 29.630 0.00 0.00 0.00 2.57
449 957 3.134574 TCGGCAACCAAGTAAGATTGT 57.865 42.857 0.00 0.00 0.00 2.71
451 959 7.404671 AATAATTCGGCAACCAAGTAAGATT 57.595 32.000 0.00 0.00 0.00 2.40
452 960 7.404671 AAATAATTCGGCAACCAAGTAAGAT 57.595 32.000 0.00 0.00 0.00 2.40
529 1037 3.667360 TCGGGTAGTAGCTTTGAAAACC 58.333 45.455 0.00 0.00 0.00 3.27
543 1051 3.815337 CTCGATCACTGTATCGGGTAG 57.185 52.381 14.86 6.31 46.81 3.18
549 1057 4.272991 AGTCCGTAACTCGATCACTGTATC 59.727 45.833 0.00 0.00 42.86 2.24
553 1061 4.815040 ATAGTCCGTAACTCGATCACTG 57.185 45.455 0.00 0.00 42.86 3.66
567 1075 3.558418 CGAACCCAAAACCATATAGTCCG 59.442 47.826 0.00 0.00 0.00 4.79
568 1076 3.881089 CCGAACCCAAAACCATATAGTCC 59.119 47.826 0.00 0.00 0.00 3.85
668 1197 9.784531 TTTTAATCAAGAATCAGGGATAGCTAG 57.215 33.333 0.00 0.00 0.00 3.42
670 1199 9.129532 CTTTTTAATCAAGAATCAGGGATAGCT 57.870 33.333 0.00 0.00 0.00 3.32
671 1200 8.355913 CCTTTTTAATCAAGAATCAGGGATAGC 58.644 37.037 0.00 0.00 0.00 2.97
712 1241 9.173939 CAATCTACTACTTTCTTTTGCAGTTTG 57.826 33.333 0.00 0.00 0.00 2.93
720 1249 8.974060 TTCACACCAATCTACTACTTTCTTTT 57.026 30.769 0.00 0.00 0.00 2.27
762 1291 8.540492 ACGCGAGAAATAAAATGTTGTAGATAG 58.460 33.333 15.93 0.00 0.00 2.08
764 1293 7.303634 ACGCGAGAAATAAAATGTTGTAGAT 57.696 32.000 15.93 0.00 0.00 1.98
765 1294 6.453265 CGACGCGAGAAATAAAATGTTGTAGA 60.453 38.462 15.93 0.00 0.00 2.59
767 1296 5.543716 CGACGCGAGAAATAAAATGTTGTA 58.456 37.500 15.93 0.00 0.00 2.41
768 1297 4.391358 CGACGCGAGAAATAAAATGTTGT 58.609 39.130 15.93 0.00 0.00 3.32
769 1298 3.235179 GCGACGCGAGAAATAAAATGTTG 59.765 43.478 15.93 0.00 0.00 3.33
770 1299 3.120477 TGCGACGCGAGAAATAAAATGTT 60.120 39.130 15.93 0.00 0.00 2.71
771 1300 2.413796 TGCGACGCGAGAAATAAAATGT 59.586 40.909 15.93 0.00 0.00 2.71
772 1301 3.033094 TGCGACGCGAGAAATAAAATG 57.967 42.857 15.93 0.00 0.00 2.32
775 1304 3.059461 AGTTTTGCGACGCGAGAAATAAA 60.059 39.130 15.93 5.25 0.00 1.40
778 1307 0.865769 AGTTTTGCGACGCGAGAAAT 59.134 45.000 15.93 6.09 0.00 2.17
786 1315 2.624766 CACACAACTAGTTTTGCGACG 58.375 47.619 19.32 3.80 0.00 5.12
829 1361 1.499049 GGACGACCATTAATCGCCTC 58.501 55.000 0.00 0.00 43.46 4.70
830 1362 0.106149 GGGACGACCATTAATCGCCT 59.894 55.000 6.20 0.00 43.46 5.52
831 1363 0.883370 GGGGACGACCATTAATCGCC 60.883 60.000 6.20 0.00 43.46 5.54
832 1364 0.106149 AGGGGACGACCATTAATCGC 59.894 55.000 6.20 0.00 43.46 4.58
833 1365 1.270147 GGAGGGGACGACCATTAATCG 60.270 57.143 6.20 0.00 45.17 3.34
880 1419 2.734591 GATGGTGCGGCCGATAGA 59.265 61.111 33.48 9.91 41.21 1.98
881 1420 2.357517 GGATGGTGCGGCCGATAG 60.358 66.667 33.48 0.00 41.21 2.08
882 1421 3.157949 TGGATGGTGCGGCCGATA 61.158 61.111 33.48 14.85 41.21 2.92
896 1435 0.257328 TTCACTTGTGGCCTTGTGGA 59.743 50.000 3.32 0.00 34.57 4.02
928 1468 1.000607 GGCGGTTTTTCTGTCCCTTTC 60.001 52.381 0.00 0.00 0.00 2.62
936 1476 1.532604 GGGAAGGGGCGGTTTTTCTG 61.533 60.000 0.00 0.00 0.00 3.02
1005 1545 1.139095 CGTCACCTCTAGCGGGTTC 59.861 63.158 3.31 1.38 34.44 3.62
1010 1550 0.375454 CAGAGACGTCACCTCTAGCG 59.625 60.000 19.50 0.00 38.84 4.26
1012 1552 1.384525 CCCAGAGACGTCACCTCTAG 58.615 60.000 19.50 5.08 38.84 2.43
1033 1573 4.115516 CCCTTCACGATACTCTGAACATG 58.884 47.826 0.00 0.00 0.00 3.21
1048 1588 0.759346 ATCCCGTCATAGCCCTTCAC 59.241 55.000 0.00 0.00 0.00 3.18
1050 1590 1.343069 AGATCCCGTCATAGCCCTTC 58.657 55.000 0.00 0.00 0.00 3.46
1053 1593 0.038159 CGAAGATCCCGTCATAGCCC 60.038 60.000 0.00 0.00 0.00 5.19
1059 1599 0.385751 GCAGATCGAAGATCCCGTCA 59.614 55.000 6.43 0.00 45.12 4.35
1077 1617 3.643978 GAGATGATGCGCACCGGC 61.644 66.667 14.90 0.00 0.00 6.13
1078 1618 2.969238 GGAGATGATGCGCACCGG 60.969 66.667 14.90 0.00 0.00 5.28
1082 1622 1.302366 GTCAATGGAGATGATGCGCA 58.698 50.000 14.96 14.96 0.00 6.09
1090 1630 0.467384 CGGAGGCTGTCAATGGAGAT 59.533 55.000 0.00 0.00 0.00 2.75
1091 1631 1.900351 CGGAGGCTGTCAATGGAGA 59.100 57.895 0.00 0.00 0.00 3.71
1141 1681 0.390472 CCTTCCTCGCTGACCTTGTC 60.390 60.000 0.00 0.00 0.00 3.18
1147 1687 2.435059 GCCACCTTCCTCGCTGAC 60.435 66.667 0.00 0.00 0.00 3.51
1166 1706 0.861837 GAATTCCTCTATGCGCCACG 59.138 55.000 4.18 0.00 0.00 4.94
1171 1711 1.059913 AGGGGGAATTCCTCTATGCG 58.940 55.000 23.75 0.00 46.85 4.73
1231 1771 4.459089 GTCGAGGAGGGTGCTGGC 62.459 72.222 0.00 0.00 0.00 4.85
1272 1812 1.051008 TGGTCGGATCATCATCCTGG 58.949 55.000 0.00 0.00 46.20 4.45
1291 1836 2.900528 CGTGTTTCGGAGAAGCTGT 58.099 52.632 0.00 0.00 45.90 4.40
1320 1865 2.681778 ACAGGTCGAGCTCCAGGG 60.682 66.667 15.54 5.72 0.00 4.45
1335 1880 4.742649 AGGCCGAGAGCGAGGACA 62.743 66.667 0.00 0.00 45.17 4.02
1336 1881 4.200283 CAGGCCGAGAGCGAGGAC 62.200 72.222 0.00 0.00 45.17 3.85
1370 1915 2.581354 CTGAGGGAGAGGGCGTTG 59.419 66.667 0.00 0.00 0.00 4.10
1399 1944 2.099062 CAGATTTCGTGCGCCAGC 59.901 61.111 4.18 0.00 45.41 4.85
1426 1971 3.978723 CTCGACCACCAGCAGCTCG 62.979 68.421 0.00 0.00 0.00 5.03
1545 2090 4.858200 CGTAGTCGTCGACGGGCG 62.858 72.222 35.05 27.10 38.60 6.13
1582 2127 2.508526 CAGTTGAAAGAGTTGAGGGGG 58.491 52.381 0.00 0.00 0.00 5.40
1612 2157 2.328099 GCCGTGGCTCTCAACAAGG 61.328 63.158 2.98 0.00 38.93 3.61
1629 2174 3.112709 GGACACCGAGCTCGTTGC 61.113 66.667 30.47 22.39 35.06 4.17
1648 2193 4.845580 ATGCAGAAGAGGCGGGCG 62.846 66.667 0.00 0.00 0.00 6.13
1696 2241 0.394192 CTCTGCCCCGCATAAGATCA 59.606 55.000 0.00 0.00 38.13 2.92
1707 2252 2.607750 TGTCCTGGACTCTGCCCC 60.608 66.667 26.03 0.00 33.15 5.80
1748 2293 1.442567 TGGCAAGCCAAAGCAGTTG 59.557 52.632 12.11 0.00 44.12 3.16
1759 2304 1.317431 TGTCATGCAGGATGGCAAGC 61.317 55.000 6.75 0.00 43.91 4.01
1762 2307 0.966875 GGTTGTCATGCAGGATGGCA 60.967 55.000 4.87 4.87 45.23 4.92
1763 2308 0.682209 AGGTTGTCATGCAGGATGGC 60.682 55.000 3.55 0.00 37.18 4.40
1764 2309 1.386533 GAGGTTGTCATGCAGGATGG 58.613 55.000 3.55 0.00 35.86 3.51
1766 2311 0.904649 TCGAGGTTGTCATGCAGGAT 59.095 50.000 3.55 0.00 0.00 3.24
1773 2321 1.645034 CGCTTGATCGAGGTTGTCAT 58.355 50.000 12.06 0.00 0.00 3.06
1775 2323 1.014044 TGCGCTTGATCGAGGTTGTC 61.014 55.000 9.73 0.00 0.00 3.18
1776 2324 1.005037 TGCGCTTGATCGAGGTTGT 60.005 52.632 9.73 0.00 0.00 3.32
1785 2333 1.886313 CATCCGAGCTGCGCTTGAT 60.886 57.895 9.73 12.40 42.27 2.57
1792 2340 3.803082 TTTGCGCATCCGAGCTGC 61.803 61.111 12.75 0.00 38.96 5.25
1797 2345 1.692148 GACGATGTTTGCGCATCCGA 61.692 55.000 12.75 0.00 41.49 4.55
1800 2348 0.314578 CGAGACGATGTTTGCGCATC 60.315 55.000 12.75 8.68 41.21 3.91
1807 2355 2.476619 CTCAAGCAACGAGACGATGTTT 59.523 45.455 0.00 0.00 34.16 2.83
1813 2361 1.337817 CGTCCTCAAGCAACGAGACG 61.338 60.000 4.60 4.60 38.65 4.18
1815 2363 1.289066 CCGTCCTCAAGCAACGAGA 59.711 57.895 0.00 0.00 38.65 4.04
1821 2369 1.330655 GGATCTCCCGTCCTCAAGCA 61.331 60.000 0.00 0.00 32.85 3.91
1825 2373 3.133437 GATGGATCTCCCGTCCTCA 57.867 57.895 0.00 0.00 43.72 3.86
1831 2379 0.755079 TGAGCTTGATGGATCTCCCG 59.245 55.000 0.00 0.00 37.93 5.14
1847 2395 3.869272 GGTGCGGCGCTTGATGAG 61.869 66.667 33.26 0.00 0.00 2.90
1880 2428 3.129871 CTCTTAAGGTGCAGCTGATAGC 58.870 50.000 20.97 14.90 42.84 2.97
1881 2429 4.662468 TCTCTTAAGGTGCAGCTGATAG 57.338 45.455 20.97 16.16 0.00 2.08
1882 2430 4.898265 AGATCTCTTAAGGTGCAGCTGATA 59.102 41.667 20.97 6.17 0.00 2.15
1890 2438 4.438148 GAGGTCAAGATCTCTTAAGGTGC 58.562 47.826 1.85 0.00 35.71 5.01
1898 2446 1.286553 AGGACCGAGGTCAAGATCTCT 59.713 52.381 22.17 6.83 46.20 3.10
1899 2447 1.679153 GAGGACCGAGGTCAAGATCTC 59.321 57.143 22.17 14.88 46.20 2.75
1900 2448 1.286553 AGAGGACCGAGGTCAAGATCT 59.713 52.381 22.17 15.64 46.20 2.75
1901 2449 1.679153 GAGAGGACCGAGGTCAAGATC 59.321 57.143 22.17 13.95 46.20 2.75
1913 2467 4.459089 GCAGGTGGCGAGAGGACC 62.459 72.222 0.00 0.00 0.00 4.46
1914 2468 4.459089 GGCAGGTGGCGAGAGGAC 62.459 72.222 0.00 0.00 46.16 3.85
1946 2500 4.785453 CTCGGGAAGCCAGGCACC 62.785 72.222 15.80 16.29 0.00 5.01
1963 2517 1.210155 GACAAGCATGTTCACGGCC 59.790 57.895 0.00 0.00 40.74 6.13
1966 2520 0.110688 CACGGACAAGCATGTTCACG 60.111 55.000 0.61 7.12 40.74 4.35
1971 2525 1.600636 CCACCACGGACAAGCATGT 60.601 57.895 0.00 0.00 44.25 3.21
1973 2527 1.302511 GACCACCACGGACAAGCAT 60.303 57.895 0.00 0.00 38.63 3.79
1974 2528 1.116536 TAGACCACCACGGACAAGCA 61.117 55.000 0.00 0.00 38.63 3.91
1975 2529 0.669625 GTAGACCACCACGGACAAGC 60.670 60.000 0.00 0.00 38.63 4.01
1977 2531 0.963962 GAGTAGACCACCACGGACAA 59.036 55.000 0.00 0.00 38.63 3.18
1978 2532 0.178984 TGAGTAGACCACCACGGACA 60.179 55.000 0.00 0.00 38.63 4.02
1979 2533 0.963962 TTGAGTAGACCACCACGGAC 59.036 55.000 0.00 0.00 38.63 4.79
1983 2537 1.067776 CGAGGTTGAGTAGACCACCAC 60.068 57.143 0.00 0.00 39.71 4.16
1985 2539 0.108756 GCGAGGTTGAGTAGACCACC 60.109 60.000 0.00 0.00 39.71 4.61
1989 2543 1.711206 GTTGGCGAGGTTGAGTAGAC 58.289 55.000 0.00 0.00 0.00 2.59
2007 2561 1.228988 ACTCCCCGGTTAAGGTCGT 60.229 57.895 0.00 0.00 0.00 4.34
2008 2562 1.217244 CACTCCCCGGTTAAGGTCG 59.783 63.158 0.00 0.00 0.00 4.79
2011 2565 1.817357 GAAACACTCCCCGGTTAAGG 58.183 55.000 0.00 0.00 0.00 2.69
2012 2566 1.270465 ACGAAACACTCCCCGGTTAAG 60.270 52.381 0.00 0.00 0.00 1.85
2014 2568 0.318120 GACGAAACACTCCCCGGTTA 59.682 55.000 0.00 0.00 0.00 2.85
2016 2570 2.739132 GACGAAACACTCCCCGGT 59.261 61.111 0.00 0.00 0.00 5.28
2020 2574 1.736032 CGATCAGGACGAAACACTCCC 60.736 57.143 0.00 0.00 0.00 4.30
2021 2575 1.067776 ACGATCAGGACGAAACACTCC 60.068 52.381 0.00 0.00 34.70 3.85
2027 2581 2.414559 GGTCGTAACGATCAGGACGAAA 60.415 50.000 12.81 0.00 41.64 3.46
2028 2582 1.131126 GGTCGTAACGATCAGGACGAA 59.869 52.381 12.81 0.00 41.64 3.85
2030 2584 0.731417 AGGTCGTAACGATCAGGACG 59.269 55.000 0.00 4.38 39.71 4.79
2031 2585 1.267932 CGAGGTCGTAACGATCAGGAC 60.268 57.143 0.00 0.00 39.71 3.85
2040 2594 2.150837 GTCTGCGCGAGGTCGTAAC 61.151 63.158 12.10 0.00 42.22 2.50
2041 2595 2.177531 GTCTGCGCGAGGTCGTAA 59.822 61.111 12.10 0.00 42.22 3.18
2042 2596 2.745100 AGTCTGCGCGAGGTCGTA 60.745 61.111 12.10 0.00 42.22 3.43
2043 2597 4.406173 CAGTCTGCGCGAGGTCGT 62.406 66.667 12.10 0.00 42.22 4.34
2045 2599 2.505118 GACAGTCTGCGCGAGGTC 60.505 66.667 12.10 9.98 0.00 3.85
2052 2606 3.114616 CTTGGGCGACAGTCTGCG 61.115 66.667 0.00 6.06 0.00 5.18
2059 2613 3.372123 TCGATGTCTTGGGCGACA 58.628 55.556 0.00 0.00 46.82 4.35
2062 2616 1.519455 GAGGTCGATGTCTTGGGCG 60.519 63.158 0.00 0.00 0.00 6.13
2066 2620 2.493675 TGAGGAAGAGGTCGATGTCTTG 59.506 50.000 14.91 0.00 33.04 3.02
2069 2623 2.231478 TGTTGAGGAAGAGGTCGATGTC 59.769 50.000 0.00 0.00 0.00 3.06
2071 2625 3.193263 CATGTTGAGGAAGAGGTCGATG 58.807 50.000 0.00 0.00 0.00 3.84
2073 2627 1.066858 GCATGTTGAGGAAGAGGTCGA 60.067 52.381 0.00 0.00 0.00 4.20
2074 2628 1.338105 TGCATGTTGAGGAAGAGGTCG 60.338 52.381 0.00 0.00 0.00 4.79
2075 2629 2.079925 GTGCATGTTGAGGAAGAGGTC 58.920 52.381 0.00 0.00 0.00 3.85
2076 2630 1.271597 GGTGCATGTTGAGGAAGAGGT 60.272 52.381 0.00 0.00 0.00 3.85
2077 2631 1.004044 AGGTGCATGTTGAGGAAGAGG 59.996 52.381 0.00 0.00 0.00 3.69
2078 2632 2.027377 AGAGGTGCATGTTGAGGAAGAG 60.027 50.000 0.00 0.00 0.00 2.85
2079 2633 1.980765 AGAGGTGCATGTTGAGGAAGA 59.019 47.619 0.00 0.00 0.00 2.87
2080 2634 2.486472 AGAGGTGCATGTTGAGGAAG 57.514 50.000 0.00 0.00 0.00 3.46
2081 2635 2.027192 GGTAGAGGTGCATGTTGAGGAA 60.027 50.000 0.00 0.00 0.00 3.36
2082 2636 1.555075 GGTAGAGGTGCATGTTGAGGA 59.445 52.381 0.00 0.00 0.00 3.71
2083 2637 1.556911 AGGTAGAGGTGCATGTTGAGG 59.443 52.381 0.00 0.00 0.00 3.86
2084 2638 2.736719 CGAGGTAGAGGTGCATGTTGAG 60.737 54.545 0.00 0.00 0.00 3.02
2085 2639 1.204704 CGAGGTAGAGGTGCATGTTGA 59.795 52.381 0.00 0.00 0.00 3.18
2086 2640 1.204704 TCGAGGTAGAGGTGCATGTTG 59.795 52.381 0.00 0.00 0.00 3.33
2087 2641 1.557099 TCGAGGTAGAGGTGCATGTT 58.443 50.000 0.00 0.00 0.00 2.71
2088 2642 1.410517 CATCGAGGTAGAGGTGCATGT 59.589 52.381 0.00 0.00 0.00 3.21
2089 2643 1.871408 GCATCGAGGTAGAGGTGCATG 60.871 57.143 0.00 0.00 33.09 4.06
2090 2644 0.390860 GCATCGAGGTAGAGGTGCAT 59.609 55.000 0.00 0.00 33.09 3.96
2091 2645 1.676678 GGCATCGAGGTAGAGGTGCA 61.677 60.000 0.00 0.00 34.45 4.57
2092 2646 1.068250 GGCATCGAGGTAGAGGTGC 59.932 63.158 0.00 0.00 0.00 5.01
2093 2647 0.824109 TTGGCATCGAGGTAGAGGTG 59.176 55.000 0.00 0.00 0.00 4.00
2094 2648 0.824759 GTTGGCATCGAGGTAGAGGT 59.175 55.000 0.00 0.00 0.00 3.85
2095 2649 0.105039 GGTTGGCATCGAGGTAGAGG 59.895 60.000 0.00 0.00 0.00 3.69
2096 2650 0.105039 GGGTTGGCATCGAGGTAGAG 59.895 60.000 0.00 0.00 0.00 2.43
2097 2651 1.672854 CGGGTTGGCATCGAGGTAGA 61.673 60.000 0.00 0.00 0.00 2.59
2098 2652 1.227263 CGGGTTGGCATCGAGGTAG 60.227 63.158 0.00 0.00 0.00 3.18
2122 2676 0.311790 AACAACAACTGCATCAGCCG 59.688 50.000 0.00 0.00 41.13 5.52
2131 2685 6.842163 ACAACTCTACAAGAAACAACAACTG 58.158 36.000 0.00 0.00 0.00 3.16
2132 2686 7.822822 ACTACAACTCTACAAGAAACAACAACT 59.177 33.333 0.00 0.00 0.00 3.16
2144 2698 5.012239 ACGGATGGTACTACAACTCTACAA 58.988 41.667 0.00 0.00 0.00 2.41
2145 2699 4.592942 ACGGATGGTACTACAACTCTACA 58.407 43.478 0.00 0.00 0.00 2.74
2146 2700 6.261826 ACATACGGATGGTACTACAACTCTAC 59.738 42.308 13.36 0.00 37.39 2.59
2147 2701 6.261603 CACATACGGATGGTACTACAACTCTA 59.738 42.308 13.36 0.00 37.39 2.43
2148 2702 5.067413 CACATACGGATGGTACTACAACTCT 59.933 44.000 13.36 0.00 37.39 3.24
2149 2703 5.279384 CACATACGGATGGTACTACAACTC 58.721 45.833 13.36 0.00 37.39 3.01
2150 2704 4.098960 CCACATACGGATGGTACTACAACT 59.901 45.833 13.36 0.00 37.39 3.16
2151 2705 4.098349 TCCACATACGGATGGTACTACAAC 59.902 45.833 13.36 0.00 37.39 3.32
2152 2706 4.279982 TCCACATACGGATGGTACTACAA 58.720 43.478 13.36 0.00 37.39 2.41
2163 2717 8.620416 CAATATGATTTTCTTTCCACATACGGA 58.380 33.333 0.00 0.00 0.00 4.69
2180 2734 8.467598 GCTTAATGATGAGATGGCAATATGATT 58.532 33.333 0.00 0.00 0.00 2.57
2194 2748 8.206325 AGACTACAAATGTGCTTAATGATGAG 57.794 34.615 0.00 0.00 0.00 2.90
2220 2774 5.193679 GGCAAATGGTTATGGAACTAGTCT 58.806 41.667 0.00 0.00 35.74 3.24
2271 2825 0.606401 ATCCAGCACCCAGTGAAACG 60.606 55.000 0.00 0.00 45.86 3.60
2287 2841 6.038714 CTGGTTAAAGCAGATGGACTAAATCC 59.961 42.308 0.00 0.00 45.98 3.01
2332 2886 4.579869 ACAATAGGCAAAGTAGGACAGTG 58.420 43.478 0.00 0.00 0.00 3.66
2350 2904 5.659440 ACCAGAAACACACTGAAAACAAT 57.341 34.783 0.00 0.00 37.54 2.71
2360 2914 1.472480 ACTGCACAACCAGAAACACAC 59.528 47.619 0.00 0.00 36.67 3.82
2368 2922 5.689383 AAATTACTACACTGCACAACCAG 57.311 39.130 0.00 0.00 38.78 4.00
2395 2949 2.093973 GCTTCACTAAGTGCTAGGCAGA 60.094 50.000 0.00 0.00 40.08 4.26
2422 2976 7.552687 CCAACAGATTGCTCCTTTTACTACATA 59.447 37.037 0.00 0.00 34.17 2.29
2423 2977 6.375455 CCAACAGATTGCTCCTTTTACTACAT 59.625 38.462 0.00 0.00 34.17 2.29
2483 3037 3.951775 TTTGCTTTCAAATATGGGCGT 57.048 38.095 0.00 0.00 37.28 5.68
2500 3054 7.431249 AGTAATGAGGCAGCAATATGATTTTG 58.569 34.615 0.00 0.00 0.00 2.44
2515 3069 3.243002 GCTTGCAGATGAAGTAATGAGGC 60.243 47.826 0.00 0.00 0.00 4.70
2533 3087 3.056250 AGTCCAGACTACAGATGTGCTTG 60.056 47.826 0.00 0.00 40.43 4.01
2537 3091 3.951037 AGCTAGTCCAGACTACAGATGTG 59.049 47.826 3.36 0.00 42.54 3.21
2538 3092 4.243793 AGCTAGTCCAGACTACAGATGT 57.756 45.455 3.36 0.00 42.54 3.06
2540 3094 4.861196 TGAAGCTAGTCCAGACTACAGAT 58.139 43.478 3.36 0.00 42.54 2.90
2541 3095 4.302559 TGAAGCTAGTCCAGACTACAGA 57.697 45.455 3.36 0.00 42.54 3.41
2543 3097 5.949952 TGTTATGAAGCTAGTCCAGACTACA 59.050 40.000 3.36 1.53 42.54 2.74
2544 3098 6.452494 TGTTATGAAGCTAGTCCAGACTAC 57.548 41.667 3.36 2.25 42.54 2.73
2545 3099 6.663953 ACTTGTTATGAAGCTAGTCCAGACTA 59.336 38.462 7.29 7.29 42.54 2.59
2546 3100 5.482175 ACTTGTTATGAAGCTAGTCCAGACT 59.518 40.000 5.50 5.50 45.02 3.24
2547 3101 5.578727 CACTTGTTATGAAGCTAGTCCAGAC 59.421 44.000 0.00 0.00 0.00 3.51
2548 3102 5.724328 CACTTGTTATGAAGCTAGTCCAGA 58.276 41.667 0.00 0.00 0.00 3.86
2550 3104 4.253685 GCACTTGTTATGAAGCTAGTCCA 58.746 43.478 0.00 0.00 0.00 4.02
2551 3105 3.623510 GGCACTTGTTATGAAGCTAGTCC 59.376 47.826 0.00 0.00 0.00 3.85
2552 3106 4.093556 GTGGCACTTGTTATGAAGCTAGTC 59.906 45.833 11.13 0.00 0.00 2.59
2555 3109 4.014569 TGTGGCACTTGTTATGAAGCTA 57.985 40.909 19.83 0.00 0.00 3.32
2557 3111 3.855689 ATGTGGCACTTGTTATGAAGC 57.144 42.857 19.83 0.00 0.00 3.86
2558 3112 8.677300 ACTAAATATGTGGCACTTGTTATGAAG 58.323 33.333 19.83 13.52 0.00 3.02
2560 3114 8.574251 AACTAAATATGTGGCACTTGTTATGA 57.426 30.769 19.83 5.78 0.00 2.15
2562 3116 9.681062 ACTAACTAAATATGTGGCACTTGTTAT 57.319 29.630 19.83 5.91 0.00 1.89
2563 3117 9.509956 AACTAACTAAATATGTGGCACTTGTTA 57.490 29.630 19.83 14.12 0.00 2.41
2564 3118 7.996098 ACTAACTAAATATGTGGCACTTGTT 57.004 32.000 19.83 14.01 0.00 2.83
2565 3119 7.663905 TCAACTAACTAAATATGTGGCACTTGT 59.336 33.333 19.83 8.13 0.00 3.16
2566 3120 8.039603 TCAACTAACTAAATATGTGGCACTTG 57.960 34.615 19.83 9.79 0.00 3.16
2567 3121 8.630054 TTCAACTAACTAAATATGTGGCACTT 57.370 30.769 19.83 15.22 0.00 3.16
2568 3122 8.807948 ATTCAACTAACTAAATATGTGGCACT 57.192 30.769 19.83 6.99 0.00 4.40
2586 3140 6.015180 ACCATGCAGTCAAATGTAATTCAACT 60.015 34.615 0.00 0.00 33.67 3.16
2627 3181 7.054751 AGGTATGAAAACTATCTGGTTAAGGC 58.945 38.462 0.00 0.00 0.00 4.35
2655 3209 6.126507 TGGGCAGAGTAGGATAATGAAATTCA 60.127 38.462 0.00 0.00 37.87 2.57
2662 3216 6.966534 AAAAATGGGCAGAGTAGGATAATG 57.033 37.500 0.00 0.00 0.00 1.90
2738 3292 2.606717 TGCGTCACACTAGTACTTCG 57.393 50.000 0.00 0.24 0.00 3.79
2754 3308 1.065418 AGGTACCCCTCAGATTTTGCG 60.065 52.381 8.74 0.00 35.62 4.85
2761 3315 5.698369 AAATAGGATAGGTACCCCTCAGA 57.302 43.478 8.74 0.00 41.45 3.27
2766 3320 9.113797 AGAGAATAAAAATAGGATAGGTACCCC 57.886 37.037 8.74 2.47 0.00 4.95
2781 3335 9.906660 AACACGAAATGCATTAGAGAATAAAAA 57.093 25.926 13.39 0.00 0.00 1.94
2792 3346 6.735678 ACTGTATGAACACGAAATGCATTA 57.264 33.333 13.39 0.00 0.00 1.90
2796 3350 4.154195 AGGAACTGTATGAACACGAAATGC 59.846 41.667 0.00 0.00 37.18 3.56
2900 3454 6.897966 AGTGATGGGATGAGAAAGTTCTACTA 59.102 38.462 0.00 0.00 37.73 1.82
2903 3457 6.627087 AAGTGATGGGATGAGAAAGTTCTA 57.373 37.500 0.00 0.00 37.73 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.