Multiple sequence alignment - TraesCS5A01G512500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G512500 chr5A 100.000 6990 0 0 838 7827 676602124 676595135 0.000000e+00 12909.0
1 TraesCS5A01G512500 chr5A 100.000 394 0 0 1 394 676602961 676602568 0.000000e+00 728.0
2 TraesCS5A01G512500 chr5A 90.411 146 13 1 3283 3428 562491154 562491298 2.880000e-44 191.0
3 TraesCS5A01G512500 chr5A 97.368 38 1 0 7383 7420 35260233 35260270 1.820000e-06 65.8
4 TraesCS5A01G512500 chr5A 100.000 35 0 0 7386 7420 366253616 366253582 1.820000e-06 65.8
5 TraesCS5A01G512500 chr4B 92.908 3821 153 52 3452 7210 637393286 637389522 0.000000e+00 5446.0
6 TraesCS5A01G512500 chr4B 95.601 2614 94 8 838 3443 637395947 637393347 0.000000e+00 4170.0
7 TraesCS5A01G512500 chr4B 88.031 259 9 8 109 366 637396207 637395970 3.570000e-73 287.0
8 TraesCS5A01G512500 chr4B 82.955 176 23 5 1870 2043 347600018 347600188 1.360000e-32 152.0
9 TraesCS5A01G512500 chr4B 84.146 164 11 10 7452 7605 637389021 637388863 2.280000e-30 145.0
10 TraesCS5A01G512500 chr4B 80.503 159 14 8 7281 7423 637389500 637389343 1.070000e-18 106.0
11 TraesCS5A01G512500 chr4B 91.667 48 4 0 1 48 637396312 637396265 5.070000e-07 67.6
12 TraesCS5A01G512500 chr4D 93.247 3080 135 27 3547 6600 497036283 497033251 0.000000e+00 4468.0
13 TraesCS5A01G512500 chr4D 96.248 2612 78 7 838 3449 497039110 497036519 0.000000e+00 4263.0
14 TraesCS5A01G512500 chr4D 89.417 737 42 13 6708 7423 497033131 497032410 0.000000e+00 896.0
15 TraesCS5A01G512500 chr4D 89.773 264 16 10 109 366 497039391 497039133 2.110000e-85 327.0
16 TraesCS5A01G512500 chr4D 91.304 46 4 0 1 46 497039508 497039463 6.560000e-06 63.9
17 TraesCS5A01G512500 chr6A 88.031 259 27 4 3441 3698 1491810 1492065 3.550000e-78 303.0
18 TraesCS5A01G512500 chr6A 89.172 157 15 2 3283 3438 1491605 1491760 2.230000e-45 195.0
19 TraesCS5A01G512500 chr6A 89.474 57 3 2 7371 7425 578721736 578721681 1.410000e-07 69.4
20 TraesCS5A01G512500 chr4A 78.797 349 48 14 1654 1995 721817840 721817511 2.210000e-50 211.0
21 TraesCS5A01G512500 chr4A 91.096 146 13 0 3283 3428 398502314 398502169 1.720000e-46 198.0
22 TraesCS5A01G512500 chr1A 89.726 146 15 0 3283 3428 513741430 513741285 3.730000e-43 187.0
23 TraesCS5A01G512500 chr6B 85.165 182 20 3 1864 2043 270820043 270820219 6.240000e-41 180.0
24 TraesCS5A01G512500 chr6B 92.000 50 2 1 7378 7425 277616296 277616247 1.410000e-07 69.4
25 TraesCS5A01G512500 chr2A 83.146 178 24 2 1864 2040 6492015 6492187 2.920000e-34 158.0
26 TraesCS5A01G512500 chr7B 82.143 140 20 4 7682 7816 692359404 692359543 1.780000e-21 115.0
27 TraesCS5A01G512500 chr3D 97.674 43 1 0 7378 7420 609076752 609076794 3.030000e-09 75.0
28 TraesCS5A01G512500 chr6D 88.333 60 4 2 7368 7425 392273229 392273171 1.410000e-07 69.4
29 TraesCS5A01G512500 chr3B 95.349 43 2 0 7378 7420 817260392 817260350 1.410000e-07 69.4
30 TraesCS5A01G512500 chr2D 95.238 42 2 0 7379 7420 234759772 234759813 5.070000e-07 67.6
31 TraesCS5A01G512500 chr2B 95.000 40 0 1 7388 7425 291587722 291587683 2.360000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G512500 chr5A 676595135 676602961 7826 True 6818.50 12909 100.000000 1 7827 2 chr5A.!!$R2 7826
1 TraesCS5A01G512500 chr4B 637388863 637396312 7449 True 1703.60 5446 88.809333 1 7605 6 chr4B.!!$R1 7604
2 TraesCS5A01G512500 chr4D 497032410 497039508 7098 True 2003.58 4468 91.997800 1 7423 5 chr4D.!!$R1 7422

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
106 126 0.107165 CCCCGTTCCTTCCTTCATCC 60.107 60.000 0.00 0.00 0.00 3.51 F
107 127 0.618458 CCCGTTCCTTCCTTCATCCA 59.382 55.000 0.00 0.00 0.00 3.41 F
108 128 1.212935 CCCGTTCCTTCCTTCATCCAT 59.787 52.381 0.00 0.00 0.00 3.41 F
1407 1452 1.282930 GCGGTGTCGAGTTGGAGTTC 61.283 60.000 0.00 0.00 39.00 3.01 F
2157 2202 1.144057 GAATGTCGGGATCGCCACT 59.856 57.895 8.86 0.00 36.13 4.00 F
3361 3410 1.056660 TATTGGGGGCACTAGCTAGC 58.943 55.000 20.91 6.62 41.70 3.42 F
4500 4691 1.063174 GGAATCGTTGCTGTCATGAGC 59.937 52.381 0.00 0.00 39.62 4.26 F
4839 5053 0.685097 TCTTAAAGCACGAGGCCTGT 59.315 50.000 12.00 5.90 46.50 4.00 F
4840 5054 0.798776 CTTAAAGCACGAGGCCTGTG 59.201 55.000 23.28 23.28 46.50 3.66 F
5166 5383 2.011947 CTGCGAATGGAATTGCTCTCA 58.988 47.619 0.00 0.00 36.07 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1407 1452 1.008875 CACCGGTGTCGTCATCACTG 61.009 60.000 26.95 0.0 40.59 3.66 R
1872 1917 5.237815 AGCGTCTCAATCAACTTTGATACA 58.762 37.500 4.89 0.0 46.60 2.29 R
2073 2118 6.293626 GCATCCATATGTCATGAAAGTACCAC 60.294 42.308 13.60 0.0 35.38 4.16 R
2358 2403 0.178995 TGAGCCACCTGCATTCAACA 60.179 50.000 0.00 0.0 44.83 3.33 R
3998 4185 0.955428 GCGCCAAGACAATGAGTGGA 60.955 55.000 0.00 0.0 32.54 4.02 R
4822 5036 0.107831 ACACAGGCCTCGTGCTTTAA 59.892 50.000 25.86 0.0 40.92 1.52 R
6073 6292 0.455410 GCATAAAAGCGACCATGGCA 59.545 50.000 13.04 0.0 0.00 4.92 R
6677 6930 0.107831 TCACCGTAAAGGCTGTTGCT 59.892 50.000 0.00 0.0 46.52 3.91 R
6679 6932 3.252215 TGAATTCACCGTAAAGGCTGTTG 59.748 43.478 3.38 0.0 46.52 3.33 R
6935 7215 0.738975 TATCCTCCTGTCTTGCGTCG 59.261 55.000 0.00 0.0 0.00 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 80 1.225855 CCAAGAACACGTAGCAGCAA 58.774 50.000 0.00 0.00 0.00 3.91
63 83 0.944311 AGAACACGTAGCAGCAACGG 60.944 55.000 0.00 0.00 44.48 4.44
94 114 2.979649 GGGAGAGACACCCCGTTC 59.020 66.667 0.00 0.00 41.38 3.95
95 115 2.657066 GGGAGAGACACCCCGTTCC 61.657 68.421 0.00 0.00 41.38 3.62
96 116 1.609794 GGAGAGACACCCCGTTCCT 60.610 63.158 0.00 0.00 0.00 3.36
98 118 0.246910 GAGAGACACCCCGTTCCTTC 59.753 60.000 0.00 0.00 0.00 3.46
99 119 1.192803 AGAGACACCCCGTTCCTTCC 61.193 60.000 0.00 0.00 0.00 3.46
100 120 1.152096 AGACACCCCGTTCCTTCCT 60.152 57.895 0.00 0.00 0.00 3.36
101 121 0.767060 AGACACCCCGTTCCTTCCTT 60.767 55.000 0.00 0.00 0.00 3.36
102 122 0.321387 GACACCCCGTTCCTTCCTTC 60.321 60.000 0.00 0.00 0.00 3.46
103 123 1.057851 ACACCCCGTTCCTTCCTTCA 61.058 55.000 0.00 0.00 0.00 3.02
104 124 0.328258 CACCCCGTTCCTTCCTTCAT 59.672 55.000 0.00 0.00 0.00 2.57
105 125 0.618981 ACCCCGTTCCTTCCTTCATC 59.381 55.000 0.00 0.00 0.00 2.92
106 126 0.107165 CCCCGTTCCTTCCTTCATCC 60.107 60.000 0.00 0.00 0.00 3.51
107 127 0.618458 CCCGTTCCTTCCTTCATCCA 59.382 55.000 0.00 0.00 0.00 3.41
108 128 1.212935 CCCGTTCCTTCCTTCATCCAT 59.787 52.381 0.00 0.00 0.00 3.41
109 129 2.565841 CCGTTCCTTCCTTCATCCATC 58.434 52.381 0.00 0.00 0.00 3.51
110 130 2.565841 CGTTCCTTCCTTCATCCATCC 58.434 52.381 0.00 0.00 0.00 3.51
111 131 2.092968 CGTTCCTTCCTTCATCCATCCA 60.093 50.000 0.00 0.00 0.00 3.41
112 132 3.434167 CGTTCCTTCCTTCATCCATCCAT 60.434 47.826 0.00 0.00 0.00 3.41
113 133 4.140536 GTTCCTTCCTTCATCCATCCATC 58.859 47.826 0.00 0.00 0.00 3.51
114 134 2.713167 TCCTTCCTTCATCCATCCATCC 59.287 50.000 0.00 0.00 0.00 3.51
115 135 2.444388 CCTTCCTTCATCCATCCATCCA 59.556 50.000 0.00 0.00 0.00 3.41
129 153 2.811514 ATCCATCCATCCGTGCGCT 61.812 57.895 9.73 0.00 0.00 5.92
130 154 3.274586 CCATCCATCCGTGCGCTG 61.275 66.667 9.73 0.08 0.00 5.18
213 239 4.726304 TAGCGGCCAAAACCCCCG 62.726 66.667 2.24 0.00 44.58 5.73
1398 1443 2.432628 GGTTCCAGCGGTGTCGAG 60.433 66.667 14.40 0.00 39.00 4.04
1407 1452 1.282930 GCGGTGTCGAGTTGGAGTTC 61.283 60.000 0.00 0.00 39.00 3.01
2046 2091 3.627577 AGATTGTGAATTACATGGCGGTC 59.372 43.478 0.00 0.00 39.48 4.79
2073 2118 4.235762 CGGGTGGGGGACTATGCG 62.236 72.222 0.00 0.00 0.00 4.73
2157 2202 1.144057 GAATGTCGGGATCGCCACT 59.856 57.895 8.86 0.00 36.13 4.00
2160 2205 2.202756 GTCGGGATCGCCACTGTC 60.203 66.667 3.90 0.00 36.13 3.51
2241 2286 3.133721 AGGAGCACTACCAAGATAAGCTG 59.866 47.826 0.00 0.00 0.00 4.24
2331 2376 2.147387 GGCATGGGAGGACCGGTAT 61.147 63.158 7.34 0.00 44.64 2.73
2358 2403 6.941436 GGATAATGCTTGAAGAGATGAGGAAT 59.059 38.462 0.00 0.00 0.00 3.01
2394 2439 2.810400 GCTCAAGTGGGCTTTGTACTCA 60.810 50.000 0.00 0.00 31.49 3.41
2424 2469 4.201881 GCAGTTACGTTTGTTTTCTGGAGT 60.202 41.667 0.00 0.00 0.00 3.85
2442 2487 2.069273 AGTTCGCCAATCTTTGTCTCG 58.931 47.619 0.00 0.00 0.00 4.04
2508 2553 1.967535 CGGAGGTGTTCTCTCTGCA 59.032 57.895 0.00 0.00 42.10 4.41
2514 2559 2.836981 AGGTGTTCTCTCTGCATTAGCT 59.163 45.455 0.00 0.00 42.74 3.32
2517 2562 4.116238 GTGTTCTCTCTGCATTAGCTACC 58.884 47.826 0.00 0.00 42.74 3.18
2613 2658 3.964688 TGGACAGGTTGTCTCACTTCTTA 59.035 43.478 8.89 0.00 46.19 2.10
2664 2709 4.349930 ACAATAAGTGTTCCACAGGGTAGT 59.650 41.667 0.00 0.00 37.01 2.73
2687 2732 4.375272 ACAGACAAGGCAATCGATATCAG 58.625 43.478 0.00 0.00 0.00 2.90
2712 2757 1.478654 GGCAGTTTCTCTTGGAACCCA 60.479 52.381 0.00 0.00 33.13 4.51
2723 2768 2.673775 TGGAACCCATCTTGCTCAAA 57.326 45.000 0.00 0.00 0.00 2.69
2730 2775 2.009774 CCATCTTGCTCAAACCCTACG 58.990 52.381 0.00 0.00 0.00 3.51
2733 2778 1.079503 CTTGCTCAAACCCTACGCTC 58.920 55.000 0.00 0.00 0.00 5.03
2737 2782 1.737363 GCTCAAACCCTACGCTCTCTG 60.737 57.143 0.00 0.00 0.00 3.35
2793 2838 1.815408 GCAGTCTGTGGTGTGATTGGT 60.815 52.381 0.93 0.00 0.00 3.67
2863 2908 3.326747 CTGTCTGGCCAAGTAAGTACAC 58.673 50.000 7.01 0.00 0.00 2.90
2873 2920 6.319399 GCCAAGTAAGTACACGCATAAAAAT 58.681 36.000 0.00 0.00 0.00 1.82
2874 2921 7.414319 GGCCAAGTAAGTACACGCATAAAAATA 60.414 37.037 0.00 0.00 0.00 1.40
2875 2922 7.964011 GCCAAGTAAGTACACGCATAAAAATAA 59.036 33.333 0.00 0.00 0.00 1.40
2876 2923 9.828852 CCAAGTAAGTACACGCATAAAAATAAA 57.171 29.630 0.00 0.00 0.00 1.40
2902 2949 6.233434 AGAGTTGATGCTAACTTGAATGACA 58.767 36.000 0.00 0.00 40.78 3.58
2943 2990 4.620723 TCTGCTCCTTATTCAGGTTAGGA 58.379 43.478 0.00 0.00 44.37 2.94
3146 3193 4.018050 AGAGGCATTAATTTGAGTGGAGGT 60.018 41.667 0.00 0.00 0.00 3.85
3245 3292 3.273434 TGTTGATGCTCATACTGGAAGC 58.727 45.455 0.00 0.00 37.60 3.86
3284 3331 7.815068 GTCTGTATCGATGTTGCCTTATTCTAT 59.185 37.037 8.54 0.00 0.00 1.98
3321 3370 5.997129 TGCTTCTGTTTCATAACATGTCAGA 59.003 36.000 0.00 2.71 43.02 3.27
3361 3410 1.056660 TATTGGGGGCACTAGCTAGC 58.943 55.000 20.91 6.62 41.70 3.42
3382 3431 9.285770 GCTAGCAAAACAGTAATTTATGTAACC 57.714 33.333 10.63 0.00 0.00 2.85
3428 3477 6.708054 AGCTGCTGACTTGATATTGGTAATAC 59.292 38.462 0.00 0.00 0.00 1.89
3429 3478 6.708054 GCTGCTGACTTGATATTGGTAATACT 59.292 38.462 0.00 0.00 0.00 2.12
3431 3480 9.197694 CTGCTGACTTGATATTGGTAATACTAC 57.802 37.037 0.00 0.00 0.00 2.73
3496 3597 5.116069 ACGTGTTGTTTATCCATGTTTCC 57.884 39.130 0.00 0.00 0.00 3.13
3501 3602 7.378181 GTGTTGTTTATCCATGTTTCCTGATT 58.622 34.615 0.00 0.00 0.00 2.57
3542 3644 3.191162 TGCATGAAAGTTGCGCTATCTTT 59.809 39.130 18.86 18.86 43.10 2.52
3544 3646 4.263911 GCATGAAAGTTGCGCTATCTTTTC 59.736 41.667 19.44 16.91 32.59 2.29
3570 3757 7.621428 AATACTTCTCATTGGACTGTTCATG 57.379 36.000 0.00 0.00 0.00 3.07
3590 3777 1.713078 GGGATAATGGGCCCTTGATCT 59.287 52.381 26.99 9.42 41.31 2.75
3597 3784 1.213678 TGGGCCCTTGATCTCTCATTG 59.786 52.381 25.70 0.00 0.00 2.82
3602 3789 3.871463 GCCCTTGATCTCTCATTGTGTGT 60.871 47.826 0.00 0.00 0.00 3.72
3998 4185 4.373156 AGCCTACAAAGGTTCACTGATT 57.627 40.909 0.00 0.00 45.64 2.57
4333 4520 5.744171 TCATGCTCTTGCTCCTAATTTGTA 58.256 37.500 0.00 0.00 40.48 2.41
4338 4525 6.658816 TGCTCTTGCTCCTAATTTGTATTTGA 59.341 34.615 0.00 0.00 40.48 2.69
4342 4529 6.509418 TGCTCCTAATTTGTATTTGACACC 57.491 37.500 0.00 0.00 37.96 4.16
4343 4530 6.245408 TGCTCCTAATTTGTATTTGACACCT 58.755 36.000 0.00 0.00 37.96 4.00
4365 4556 5.212532 TGTGTGGCTTTTCTAATTTGCAT 57.787 34.783 0.00 0.00 0.00 3.96
4367 4558 6.155827 TGTGTGGCTTTTCTAATTTGCATAC 58.844 36.000 0.00 0.00 0.00 2.39
4368 4559 6.015519 TGTGTGGCTTTTCTAATTTGCATACT 60.016 34.615 0.00 0.00 0.00 2.12
4485 4676 6.089249 ACAACAATTCAACTCCTTGGAATC 57.911 37.500 0.00 0.00 0.00 2.52
4500 4691 1.063174 GGAATCGTTGCTGTCATGAGC 59.937 52.381 0.00 0.00 39.62 4.26
4533 4724 7.448469 ACATGGCAAGTTCTGTTTCTTATAGTT 59.552 33.333 0.00 0.00 0.00 2.24
4589 4780 8.761497 GGTAAATTGCTAAACTTTCAGGTTTTC 58.239 33.333 0.00 0.00 39.66 2.29
4596 4787 8.194769 TGCTAAACTTTCAGGTTTTCTTTTAGG 58.805 33.333 0.00 0.00 39.66 2.69
4600 4791 6.370453 ACTTTCAGGTTTTCTTTTAGGGCTA 58.630 36.000 0.00 0.00 0.00 3.93
4615 4829 2.711547 AGGGCTAACATTACCTGGGATC 59.288 50.000 0.00 0.00 30.71 3.36
4627 4841 8.122481 ACATTACCTGGGATCCTTAATTTCTTT 58.878 33.333 12.58 0.00 0.00 2.52
4634 4848 9.200817 CTGGGATCCTTAATTTCTTTAATGGAA 57.799 33.333 12.58 0.00 34.07 3.53
4682 4896 5.063880 GCAAGGGTAGATACACCTAAATGG 58.936 45.833 0.00 0.00 38.73 3.16
4683 4897 4.976540 AGGGTAGATACACCTAAATGGC 57.023 45.455 0.00 0.00 40.22 4.40
4685 4899 5.723355 AGGGTAGATACACCTAAATGGCTA 58.277 41.667 0.00 0.00 40.22 3.93
4689 4903 7.390718 GGGTAGATACACCTAAATGGCTAAATG 59.609 40.741 0.00 0.00 40.22 2.32
4690 4904 8.154856 GGTAGATACACCTAAATGGCTAAATGA 58.845 37.037 0.00 0.00 40.22 2.57
4691 4905 9.555727 GTAGATACACCTAAATGGCTAAATGAA 57.444 33.333 0.00 0.00 40.22 2.57
4693 4907 9.289782 AGATACACCTAAATGGCTAAATGAATC 57.710 33.333 0.00 0.00 40.22 2.52
4694 4908 8.995027 ATACACCTAAATGGCTAAATGAATCA 57.005 30.769 0.00 0.00 40.22 2.57
4695 4909 7.100458 ACACCTAAATGGCTAAATGAATCAC 57.900 36.000 0.00 0.00 40.22 3.06
4696 4910 6.891908 ACACCTAAATGGCTAAATGAATCACT 59.108 34.615 0.00 0.00 40.22 3.41
4745 4959 4.402829 TGGCTGCCTTTGTCATTTAACTA 58.597 39.130 21.03 0.00 0.00 2.24
4746 4960 4.458989 TGGCTGCCTTTGTCATTTAACTAG 59.541 41.667 21.03 0.00 0.00 2.57
4747 4961 4.415735 GCTGCCTTTGTCATTTAACTAGC 58.584 43.478 0.00 0.00 0.00 3.42
4768 4982 3.445096 GCAGCCAATTAACCAGAGAACAT 59.555 43.478 0.00 0.00 0.00 2.71
4814 5028 6.929606 AGTATCGAAAGTTGTGAAGTAAGCTT 59.070 34.615 3.48 3.48 37.71 3.74
4818 5032 8.821147 TCGAAAGTTGTGAAGTAAGCTTATTA 57.179 30.769 9.88 0.00 34.61 0.98
4833 5047 9.851043 GTAAGCTTATTATTCTTAAAGCACGAG 57.149 33.333 9.88 0.00 45.31 4.18
4834 5048 7.484035 AGCTTATTATTCTTAAAGCACGAGG 57.516 36.000 8.44 0.00 45.31 4.63
4835 5049 6.017852 AGCTTATTATTCTTAAAGCACGAGGC 60.018 38.462 8.44 0.00 45.31 4.70
4836 5050 6.613755 TTATTATTCTTAAAGCACGAGGCC 57.386 37.500 0.00 0.00 46.50 5.19
4837 5051 2.789409 ATTCTTAAAGCACGAGGCCT 57.211 45.000 3.86 3.86 46.50 5.19
4838 5052 1.808411 TTCTTAAAGCACGAGGCCTG 58.192 50.000 12.00 5.11 46.50 4.85
4839 5053 0.685097 TCTTAAAGCACGAGGCCTGT 59.315 50.000 12.00 5.90 46.50 4.00
4840 5054 0.798776 CTTAAAGCACGAGGCCTGTG 59.201 55.000 23.28 23.28 46.50 3.66
4956 5173 6.146673 TGCAGAGATATTACATTGCTTCATCG 59.853 38.462 0.00 0.00 33.00 3.84
5166 5383 2.011947 CTGCGAATGGAATTGCTCTCA 58.988 47.619 0.00 0.00 36.07 3.27
5255 5472 4.179926 TGTCTTATCTGCTGTCTCACAC 57.820 45.455 0.00 0.00 0.00 3.82
5256 5473 3.573967 TGTCTTATCTGCTGTCTCACACA 59.426 43.478 0.00 0.00 0.00 3.72
5284 5503 5.653507 TCTGTTGCATTTTATGATCTTGCC 58.346 37.500 0.00 0.00 32.39 4.52
5390 5609 4.725790 ACAAGCTTTCCAATTGATAGGC 57.274 40.909 7.12 6.40 0.00 3.93
5540 5759 5.053145 CCTAGTGAAGCACCACTGATTATC 58.947 45.833 17.77 0.00 46.00 1.75
5558 5777 2.998949 GAGAATTGCCGTCCCCCT 59.001 61.111 0.00 0.00 0.00 4.79
5614 5833 7.849804 TGATTGATCTCAAGGTAAACTTAGC 57.150 36.000 0.00 0.00 39.47 3.09
5626 5845 3.918294 AAACTTAGCCCGTAGCCATTA 57.082 42.857 0.00 0.00 45.47 1.90
5627 5846 4.432980 AAACTTAGCCCGTAGCCATTAT 57.567 40.909 0.00 0.00 45.47 1.28
5630 5849 5.556006 ACTTAGCCCGTAGCCATTATTTA 57.444 39.130 0.00 0.00 45.47 1.40
5631 5850 6.123045 ACTTAGCCCGTAGCCATTATTTAT 57.877 37.500 0.00 0.00 45.47 1.40
5633 5852 7.002276 ACTTAGCCCGTAGCCATTATTTATTT 58.998 34.615 0.00 0.00 45.47 1.40
5634 5853 5.705609 AGCCCGTAGCCATTATTTATTTG 57.294 39.130 0.00 0.00 45.47 2.32
5635 5854 5.137551 AGCCCGTAGCCATTATTTATTTGT 58.862 37.500 0.00 0.00 45.47 2.83
5636 5855 5.240844 AGCCCGTAGCCATTATTTATTTGTC 59.759 40.000 0.00 0.00 45.47 3.18
5637 5856 5.009210 GCCCGTAGCCATTATTTATTTGTCA 59.991 40.000 0.00 0.00 34.35 3.58
5638 5857 6.294508 GCCCGTAGCCATTATTTATTTGTCAT 60.295 38.462 0.00 0.00 34.35 3.06
5672 5891 9.990360 TTGCTCTTCGTTATATATATTCACCAA 57.010 29.630 0.00 0.00 0.00 3.67
5719 5938 8.128322 TCTTCTTCTAAGCTGAACATACTTCT 57.872 34.615 0.00 0.00 0.00 2.85
5778 5997 6.859112 ATATCATAGGTTCGCTACAAGGAT 57.141 37.500 0.00 0.00 0.00 3.24
5823 6042 5.070685 GGAGTCAGTTGTATTTTTCCTGGT 58.929 41.667 0.00 0.00 0.00 4.00
5847 6066 5.222442 TGGGAAAAAGATTGGGATTGTAGGA 60.222 40.000 0.00 0.00 0.00 2.94
5905 6124 5.390991 GCTCTTTTCCGTCTAATTGAACCAG 60.391 44.000 0.00 0.00 0.00 4.00
5939 6158 7.919313 AAATTATCATTGACAACATCGATGC 57.081 32.000 25.11 9.44 45.71 3.91
6073 6292 6.973642 TCTGATCAAGAAATTTGGGAGGTAT 58.026 36.000 0.00 0.00 29.54 2.73
6134 6353 6.489361 GTGCCATGATCTTTATGGAAGAGAAT 59.511 38.462 13.41 0.00 46.99 2.40
6137 6356 7.447853 GCCATGATCTTTATGGAAGAGAATTCT 59.552 37.037 7.95 7.95 46.99 2.40
6267 6487 4.060900 TCAAAGAGTGAGCATGACACTTC 58.939 43.478 20.95 15.50 31.47 3.01
6290 6510 4.150980 CGTAAAGCATGACACCTCGTAAAA 59.849 41.667 0.00 0.00 0.00 1.52
6464 6688 6.475076 CAGTTGACACAGCTACAGATAATCTC 59.525 42.308 0.00 0.00 0.00 2.75
6476 6700 7.975616 GCTACAGATAATCTCATCCAGAAGATC 59.024 40.741 0.00 0.00 33.62 2.75
6479 6703 8.533657 ACAGATAATCTCATCCAGAAGATCATC 58.466 37.037 0.00 0.00 33.62 2.92
6605 6851 4.250464 TCACACGATTAACCAAGACCATC 58.750 43.478 0.00 0.00 0.00 3.51
6652 6905 7.482474 TCGTATGTTGAATTATCCGAGTAACA 58.518 34.615 0.00 0.00 0.00 2.41
6661 6914 2.803030 TCCGAGTAACACTCCTAGCT 57.197 50.000 0.00 0.00 42.12 3.32
6667 6920 5.094134 CGAGTAACACTCCTAGCTAAACAC 58.906 45.833 0.00 0.00 42.12 3.32
6675 6928 5.406780 CACTCCTAGCTAAACACTGTTCTTG 59.593 44.000 0.00 0.00 0.00 3.02
6677 6930 4.591498 TCCTAGCTAAACACTGTTCTTGGA 59.409 41.667 7.67 7.67 0.00 3.53
6679 6932 3.142174 AGCTAAACACTGTTCTTGGAGC 58.858 45.455 0.00 0.76 0.00 4.70
6686 6962 0.595095 CTGTTCTTGGAGCAACAGCC 59.405 55.000 0.06 0.00 42.23 4.85
6687 6963 0.183492 TGTTCTTGGAGCAACAGCCT 59.817 50.000 0.00 0.00 0.00 4.58
6758 7035 1.003233 GACACACCCCAGAGGCTTC 60.003 63.158 0.00 0.00 40.58 3.86
6929 7209 5.221762 ACCATACAAGTAAGTAGCAACACCA 60.222 40.000 0.00 0.00 0.00 4.17
6930 7210 5.880332 CCATACAAGTAAGTAGCAACACCAT 59.120 40.000 0.00 0.00 0.00 3.55
6931 7211 7.045416 CCATACAAGTAAGTAGCAACACCATA 58.955 38.462 0.00 0.00 0.00 2.74
6932 7212 7.224753 CCATACAAGTAAGTAGCAACACCATAG 59.775 40.741 0.00 0.00 0.00 2.23
6933 7213 5.488341 ACAAGTAAGTAGCAACACCATAGG 58.512 41.667 0.00 0.00 0.00 2.57
6934 7214 4.755266 AGTAAGTAGCAACACCATAGGG 57.245 45.455 0.00 0.00 41.29 3.53
6935 7215 2.420058 AAGTAGCAACACCATAGGGC 57.580 50.000 0.00 0.00 37.90 5.19
6936 7216 0.178068 AGTAGCAACACCATAGGGCG 59.822 55.000 0.00 0.00 37.90 6.13
6937 7217 0.177141 GTAGCAACACCATAGGGCGA 59.823 55.000 0.00 0.00 37.90 5.54
6938 7218 0.177141 TAGCAACACCATAGGGCGAC 59.823 55.000 0.00 0.00 37.90 5.19
6939 7219 2.461110 GCAACACCATAGGGCGACG 61.461 63.158 0.00 0.00 37.90 5.12
6940 7220 2.125269 AACACCATAGGGCGACGC 60.125 61.111 12.43 12.43 37.90 5.19
6941 7221 2.949909 AACACCATAGGGCGACGCA 61.950 57.895 23.09 0.56 37.90 5.24
6964 7244 3.396611 AGACAGGAGGATAGGAGAGGTAC 59.603 52.174 0.00 0.00 0.00 3.34
6973 7253 1.486211 AGGAGAGGTACATGAACGGG 58.514 55.000 0.00 0.00 0.00 5.28
6976 7256 2.235402 GGAGAGGTACATGAACGGGAAA 59.765 50.000 0.00 0.00 0.00 3.13
6977 7257 3.522553 GAGAGGTACATGAACGGGAAAG 58.477 50.000 0.00 0.00 0.00 2.62
6979 7259 3.581332 AGAGGTACATGAACGGGAAAGAA 59.419 43.478 0.00 0.00 0.00 2.52
6980 7260 4.041198 AGAGGTACATGAACGGGAAAGAAA 59.959 41.667 0.00 0.00 0.00 2.52
6985 7265 1.167781 TGAACGGGAAAGAAACGCCC 61.168 55.000 0.00 0.00 38.53 6.13
7008 7288 1.404986 CGCGTTCCCTGACCTGAATAA 60.405 52.381 0.00 0.00 0.00 1.40
7020 7300 6.183361 CCTGACCTGAATAACCATGGATTCTA 60.183 42.308 21.47 8.13 33.92 2.10
7050 7330 4.005472 GCGGCAGGCGATCGAATG 62.005 66.667 22.52 16.90 0.00 2.67
7101 7381 4.959596 AGCTCTGATGCTTTTGTATGTG 57.040 40.909 0.00 0.00 40.93 3.21
7229 7511 3.372440 TCATCTCTGTGACAGCTCCTA 57.628 47.619 7.93 0.00 0.00 2.94
7235 7520 4.399618 TCTCTGTGACAGCTCCTATGTTAC 59.600 45.833 7.93 0.00 37.59 2.50
7236 7521 3.128764 TCTGTGACAGCTCCTATGTTACG 59.871 47.826 7.93 0.00 39.34 3.18
7240 7525 5.126545 TGTGACAGCTCCTATGTTACGTATT 59.873 40.000 0.00 0.00 39.34 1.89
7241 7526 5.459107 GTGACAGCTCCTATGTTACGTATTG 59.541 44.000 0.00 0.00 29.12 1.90
7262 7547 3.630312 TGAAACTGTTCTGTGTTTAGCCC 59.370 43.478 0.00 0.00 36.64 5.19
7274 7559 4.165779 GTGTTTAGCCCGAAAATGTGATG 58.834 43.478 0.00 0.00 0.00 3.07
7283 7568 3.431856 CGAAAATGTGATGCAGTGGATG 58.568 45.455 0.12 0.00 0.00 3.51
7288 7573 2.291365 TGTGATGCAGTGGATGTATGC 58.709 47.619 0.12 0.00 40.40 3.14
7289 7574 1.262417 GTGATGCAGTGGATGTATGCG 59.738 52.381 0.12 0.00 42.92 4.73
7334 7619 0.749049 TGGATCGGATCACAGCTCTG 59.251 55.000 18.99 0.00 0.00 3.35
7335 7620 0.749649 GGATCGGATCACAGCTCTGT 59.250 55.000 18.99 0.00 46.17 3.41
7336 7621 1.137872 GGATCGGATCACAGCTCTGTT 59.862 52.381 18.99 0.00 42.83 3.16
7337 7622 2.200067 GATCGGATCACAGCTCTGTTG 58.800 52.381 13.02 0.00 42.83 3.33
7339 7624 2.167662 TCGGATCACAGCTCTGTTGTA 58.832 47.619 0.00 0.00 42.83 2.41
7340 7625 2.164422 TCGGATCACAGCTCTGTTGTAG 59.836 50.000 0.00 0.00 42.83 2.74
7341 7626 2.736719 CGGATCACAGCTCTGTTGTAGG 60.737 54.545 0.00 0.00 42.83 3.18
7344 7629 3.876274 TCACAGCTCTGTTGTAGGATC 57.124 47.619 0.00 0.00 42.83 3.36
7346 7631 2.094494 CACAGCTCTGTTGTAGGATCGT 60.094 50.000 0.00 0.00 42.83 3.73
7355 7654 4.247258 TGTTGTAGGATCGTAACGCAAAT 58.753 39.130 0.00 0.00 0.00 2.32
7361 7660 4.751060 AGGATCGTAACGCAAATTGTAGA 58.249 39.130 0.00 0.00 0.00 2.59
7365 7664 6.237996 GGATCGTAACGCAAATTGTAGAATCA 60.238 38.462 0.00 0.00 0.00 2.57
7374 7673 9.162764 ACGCAAATTGTAGAATCATAACTACTT 57.837 29.630 0.00 0.00 39.46 2.24
7381 7680 8.762481 TGTAGAATCATAACTACTTAGCTCCA 57.238 34.615 0.00 0.00 39.46 3.86
7450 7763 9.499479 AAAAATGTGCCTATACATCTGATCTAG 57.501 33.333 0.00 0.00 40.24 2.43
7451 7764 8.427902 AAATGTGCCTATACATCTGATCTAGA 57.572 34.615 0.00 0.00 40.24 2.43
7452 7765 7.643569 ATGTGCCTATACATCTGATCTAGAG 57.356 40.000 0.00 0.00 36.60 2.43
7454 7767 7.234355 TGTGCCTATACATCTGATCTAGAGAA 58.766 38.462 0.00 0.00 39.20 2.87
7455 7768 7.725844 TGTGCCTATACATCTGATCTAGAGAAA 59.274 37.037 0.00 0.00 39.20 2.52
7456 7769 8.580720 GTGCCTATACATCTGATCTAGAGAAAA 58.419 37.037 0.00 0.00 39.20 2.29
7457 7770 9.147732 TGCCTATACATCTGATCTAGAGAAAAA 57.852 33.333 0.00 0.00 39.20 1.94
7529 8119 4.682778 TCATAGGGGTTGGTTTAGATCG 57.317 45.455 0.00 0.00 0.00 3.69
7544 8134 7.544566 TGGTTTAGATCGTGAAGTTGTAGAATC 59.455 37.037 0.00 0.00 0.00 2.52
7548 8138 6.256686 AGATCGTGAAGTTGTAGAATCGTAC 58.743 40.000 0.00 0.00 0.00 3.67
7549 8139 5.361135 TCGTGAAGTTGTAGAATCGTACA 57.639 39.130 0.00 0.00 0.00 2.90
7550 8140 5.149273 TCGTGAAGTTGTAGAATCGTACAC 58.851 41.667 0.00 0.00 32.53 2.90
7551 8141 4.913345 CGTGAAGTTGTAGAATCGTACACA 59.087 41.667 0.00 0.00 32.53 3.72
7553 8143 6.089016 CGTGAAGTTGTAGAATCGTACACAAT 59.911 38.462 0.00 0.00 33.79 2.71
7554 8144 7.358931 CGTGAAGTTGTAGAATCGTACACAATT 60.359 37.037 0.00 0.00 33.79 2.32
7555 8145 7.950496 GTGAAGTTGTAGAATCGTACACAATTC 59.050 37.037 0.00 0.00 33.79 2.17
7556 8146 6.963049 AGTTGTAGAATCGTACACAATTCC 57.037 37.500 8.31 0.00 33.79 3.01
7557 8147 5.575606 AGTTGTAGAATCGTACACAATTCCG 59.424 40.000 8.31 0.00 33.79 4.30
7558 8148 5.313520 TGTAGAATCGTACACAATTCCGA 57.686 39.130 8.31 0.00 33.29 4.55
7560 8150 4.451629 AGAATCGTACACAATTCCGACT 57.548 40.909 8.31 0.00 33.29 4.18
7600 8199 3.739810 GGTTTAGTTCTTCAGTGGACGAC 59.260 47.826 0.00 0.00 0.00 4.34
7605 8204 2.989840 GTTCTTCAGTGGACGACATCAG 59.010 50.000 0.00 0.00 0.00 2.90
7606 8205 2.239400 TCTTCAGTGGACGACATCAGT 58.761 47.619 0.00 0.00 0.00 3.41
7607 8206 3.418047 TCTTCAGTGGACGACATCAGTA 58.582 45.455 0.00 0.00 0.00 2.74
7608 8207 3.190744 TCTTCAGTGGACGACATCAGTAC 59.809 47.826 0.00 0.00 0.00 2.73
7609 8208 2.791655 TCAGTGGACGACATCAGTACT 58.208 47.619 0.00 0.00 0.00 2.73
7610 8209 3.154710 TCAGTGGACGACATCAGTACTT 58.845 45.455 0.00 0.00 0.00 2.24
7611 8210 3.190744 TCAGTGGACGACATCAGTACTTC 59.809 47.826 0.00 0.00 0.00 3.01
7612 8211 2.492484 AGTGGACGACATCAGTACTTCC 59.508 50.000 0.00 0.00 0.00 3.46
7613 8212 2.492484 GTGGACGACATCAGTACTTCCT 59.508 50.000 8.57 0.00 0.00 3.36
7614 8213 2.753452 TGGACGACATCAGTACTTCCTC 59.247 50.000 8.57 0.00 0.00 3.71
7615 8214 2.753452 GGACGACATCAGTACTTCCTCA 59.247 50.000 0.00 0.00 0.00 3.86
7616 8215 3.427773 GGACGACATCAGTACTTCCTCAC 60.428 52.174 0.00 0.00 0.00 3.51
7617 8216 3.422796 ACGACATCAGTACTTCCTCACT 58.577 45.455 0.00 0.00 0.00 3.41
7618 8217 3.827302 ACGACATCAGTACTTCCTCACTT 59.173 43.478 0.00 0.00 0.00 3.16
7619 8218 4.082679 ACGACATCAGTACTTCCTCACTTC 60.083 45.833 0.00 0.00 0.00 3.01
7620 8219 4.675671 CGACATCAGTACTTCCTCACTTCC 60.676 50.000 0.00 0.00 0.00 3.46
7621 8220 4.421131 ACATCAGTACTTCCTCACTTCCT 58.579 43.478 0.00 0.00 0.00 3.36
7622 8221 4.464597 ACATCAGTACTTCCTCACTTCCTC 59.535 45.833 0.00 0.00 0.00 3.71
7623 8222 4.114015 TCAGTACTTCCTCACTTCCTCA 57.886 45.455 0.00 0.00 0.00 3.86
7624 8223 4.082845 TCAGTACTTCCTCACTTCCTCAG 58.917 47.826 0.00 0.00 0.00 3.35
7625 8224 3.194542 CAGTACTTCCTCACTTCCTCAGG 59.805 52.174 0.00 0.00 0.00 3.86
7626 8225 2.704190 ACTTCCTCACTTCCTCAGGA 57.296 50.000 0.00 0.00 34.31 3.86
7627 8226 2.534990 ACTTCCTCACTTCCTCAGGAG 58.465 52.381 0.00 0.00 37.62 3.69
7628 8227 2.110899 ACTTCCTCACTTCCTCAGGAGA 59.889 50.000 0.00 0.00 37.62 3.71
7629 8228 3.169099 CTTCCTCACTTCCTCAGGAGAA 58.831 50.000 0.00 0.00 37.62 2.87
7630 8229 2.530701 TCCTCACTTCCTCAGGAGAAC 58.469 52.381 0.00 0.00 32.26 3.01
7631 8230 2.110899 TCCTCACTTCCTCAGGAGAACT 59.889 50.000 0.00 0.00 32.26 3.01
7632 8231 3.333980 TCCTCACTTCCTCAGGAGAACTA 59.666 47.826 0.00 0.00 32.26 2.24
7633 8232 3.699038 CCTCACTTCCTCAGGAGAACTAG 59.301 52.174 0.00 0.00 31.21 2.57
7634 8233 4.340617 CTCACTTCCTCAGGAGAACTAGT 58.659 47.826 0.00 0.00 31.21 2.57
7635 8234 4.337145 TCACTTCCTCAGGAGAACTAGTC 58.663 47.826 0.00 0.00 31.21 2.59
7636 8235 3.127895 CACTTCCTCAGGAGAACTAGTCG 59.872 52.174 0.00 0.00 31.21 4.18
7637 8236 2.421751 TCCTCAGGAGAACTAGTCGG 57.578 55.000 0.00 0.00 0.00 4.79
7638 8237 1.064611 TCCTCAGGAGAACTAGTCGGG 60.065 57.143 0.00 0.00 0.00 5.14
7639 8238 1.394618 CTCAGGAGAACTAGTCGGGG 58.605 60.000 0.00 0.00 0.00 5.73
7640 8239 0.997363 TCAGGAGAACTAGTCGGGGA 59.003 55.000 0.00 0.00 0.00 4.81
7641 8240 1.356738 TCAGGAGAACTAGTCGGGGAA 59.643 52.381 0.00 0.00 0.00 3.97
7642 8241 2.176889 CAGGAGAACTAGTCGGGGAAA 58.823 52.381 0.00 0.00 0.00 3.13
7643 8242 2.766828 CAGGAGAACTAGTCGGGGAAAT 59.233 50.000 0.00 0.00 0.00 2.17
7644 8243 2.766828 AGGAGAACTAGTCGGGGAAATG 59.233 50.000 0.00 0.00 0.00 2.32
7645 8244 2.552031 GAGAACTAGTCGGGGAAATGC 58.448 52.381 0.00 0.00 0.00 3.56
7646 8245 1.906574 AGAACTAGTCGGGGAAATGCA 59.093 47.619 0.00 0.00 0.00 3.96
7647 8246 2.304761 AGAACTAGTCGGGGAAATGCAA 59.695 45.455 0.00 0.00 0.00 4.08
7648 8247 2.871096 ACTAGTCGGGGAAATGCAAA 57.129 45.000 0.00 0.00 0.00 3.68
7649 8248 3.149005 ACTAGTCGGGGAAATGCAAAA 57.851 42.857 0.00 0.00 0.00 2.44
7650 8249 3.697166 ACTAGTCGGGGAAATGCAAAAT 58.303 40.909 0.00 0.00 0.00 1.82
7651 8250 3.443681 ACTAGTCGGGGAAATGCAAAATG 59.556 43.478 0.00 0.00 0.00 2.32
7652 8251 1.550072 AGTCGGGGAAATGCAAAATGG 59.450 47.619 0.00 0.00 0.00 3.16
7653 8252 1.275010 GTCGGGGAAATGCAAAATGGT 59.725 47.619 0.00 0.00 0.00 3.55
7654 8253 1.974236 TCGGGGAAATGCAAAATGGTT 59.026 42.857 0.00 0.00 0.00 3.67
7655 8254 2.028567 TCGGGGAAATGCAAAATGGTTC 60.029 45.455 0.00 0.00 0.00 3.62
7656 8255 2.028203 CGGGGAAATGCAAAATGGTTCT 60.028 45.455 0.00 0.00 0.00 3.01
7657 8256 3.337358 GGGGAAATGCAAAATGGTTCTG 58.663 45.455 0.00 0.00 0.00 3.02
7658 8257 3.337358 GGGAAATGCAAAATGGTTCTGG 58.663 45.455 0.00 0.00 0.00 3.86
7659 8258 3.244526 GGGAAATGCAAAATGGTTCTGGT 60.245 43.478 0.00 0.00 0.00 4.00
7660 8259 4.388485 GGAAATGCAAAATGGTTCTGGTT 58.612 39.130 0.00 0.00 0.00 3.67
7661 8260 4.821260 GGAAATGCAAAATGGTTCTGGTTT 59.179 37.500 0.00 0.00 0.00 3.27
7662 8261 5.277925 GGAAATGCAAAATGGTTCTGGTTTG 60.278 40.000 0.00 0.00 34.74 2.93
7663 8262 3.191078 TGCAAAATGGTTCTGGTTTGG 57.809 42.857 0.00 0.00 32.73 3.28
7664 8263 2.158842 TGCAAAATGGTTCTGGTTTGGG 60.159 45.455 0.00 0.00 32.73 4.12
7665 8264 2.493035 CAAAATGGTTCTGGTTTGGGC 58.507 47.619 0.00 0.00 0.00 5.36
7666 8265 1.799933 AAATGGTTCTGGTTTGGGCA 58.200 45.000 0.00 0.00 0.00 5.36
7667 8266 1.047801 AATGGTTCTGGTTTGGGCAC 58.952 50.000 0.00 0.00 0.00 5.01
7668 8267 0.188342 ATGGTTCTGGTTTGGGCACT 59.812 50.000 0.00 0.00 0.00 4.40
7669 8268 0.754957 TGGTTCTGGTTTGGGCACTG 60.755 55.000 0.00 0.00 0.00 3.66
7670 8269 1.363807 GTTCTGGTTTGGGCACTGC 59.636 57.895 0.00 0.00 0.00 4.40
7671 8270 1.109323 GTTCTGGTTTGGGCACTGCT 61.109 55.000 0.00 0.00 0.00 4.24
7672 8271 0.823356 TTCTGGTTTGGGCACTGCTC 60.823 55.000 0.00 0.00 0.00 4.26
7673 8272 2.594303 TGGTTTGGGCACTGCTCG 60.594 61.111 0.00 0.00 0.00 5.03
7674 8273 3.365265 GGTTTGGGCACTGCTCGG 61.365 66.667 0.00 0.00 0.00 4.63
7675 8274 4.043200 GTTTGGGCACTGCTCGGC 62.043 66.667 0.00 0.00 0.00 5.54
7699 8298 4.717629 GCGCCGGCCCAGTTTTTC 62.718 66.667 23.46 0.00 0.00 2.29
7700 8299 4.398598 CGCCGGCCCAGTTTTTCG 62.399 66.667 23.46 0.00 0.00 3.46
7701 8300 4.050934 GCCGGCCCAGTTTTTCGG 62.051 66.667 18.11 0.00 43.13 4.30
7702 8301 4.050934 CCGGCCCAGTTTTTCGGC 62.051 66.667 0.00 0.00 42.23 5.54
7705 8304 4.050934 GCCCAGTTTTTCGGCCGG 62.051 66.667 27.83 6.84 36.63 6.13
7706 8305 2.596338 CCCAGTTTTTCGGCCGGT 60.596 61.111 27.83 0.00 0.00 5.28
7707 8306 2.622962 CCCAGTTTTTCGGCCGGTC 61.623 63.158 27.83 11.27 0.00 4.79
7708 8307 1.894756 CCAGTTTTTCGGCCGGTCA 60.895 57.895 27.83 6.94 0.00 4.02
7709 8308 1.281656 CAGTTTTTCGGCCGGTCAC 59.718 57.895 27.83 16.73 0.00 3.67
7710 8309 1.153127 AGTTTTTCGGCCGGTCACA 60.153 52.632 27.83 1.12 0.00 3.58
7711 8310 0.536460 AGTTTTTCGGCCGGTCACAT 60.536 50.000 27.83 5.01 0.00 3.21
7712 8311 0.109919 GTTTTTCGGCCGGTCACATC 60.110 55.000 27.83 6.61 0.00 3.06
7713 8312 0.250553 TTTTTCGGCCGGTCACATCT 60.251 50.000 27.83 0.00 0.00 2.90
7714 8313 0.609151 TTTTCGGCCGGTCACATCTA 59.391 50.000 27.83 0.00 0.00 1.98
7715 8314 0.609151 TTTCGGCCGGTCACATCTAA 59.391 50.000 27.83 5.54 0.00 2.10
7716 8315 0.828022 TTCGGCCGGTCACATCTAAT 59.172 50.000 27.83 0.00 0.00 1.73
7717 8316 0.104120 TCGGCCGGTCACATCTAATG 59.896 55.000 27.83 0.00 0.00 1.90
7718 8317 1.498865 CGGCCGGTCACATCTAATGC 61.499 60.000 20.10 0.00 0.00 3.56
7719 8318 1.498865 GGCCGGTCACATCTAATGCG 61.499 60.000 0.00 0.00 0.00 4.73
7720 8319 0.810031 GCCGGTCACATCTAATGCGT 60.810 55.000 1.90 0.00 0.00 5.24
7721 8320 1.651987 CCGGTCACATCTAATGCGTT 58.348 50.000 0.00 0.00 0.00 4.84
7722 8321 2.816689 CCGGTCACATCTAATGCGTTA 58.183 47.619 0.00 0.00 0.00 3.18
7723 8322 2.794910 CCGGTCACATCTAATGCGTTAG 59.205 50.000 18.05 18.05 38.93 2.34
7733 8332 4.751060 TCTAATGCGTTAGATTCGGTTGT 58.249 39.130 21.89 0.00 40.98 3.32
7734 8333 5.172934 TCTAATGCGTTAGATTCGGTTGTT 58.827 37.500 21.89 0.00 40.98 2.83
7735 8334 6.331845 TCTAATGCGTTAGATTCGGTTGTTA 58.668 36.000 21.89 0.00 40.98 2.41
7736 8335 4.852609 ATGCGTTAGATTCGGTTGTTAC 57.147 40.909 0.00 0.00 0.00 2.50
7737 8336 2.995258 TGCGTTAGATTCGGTTGTTACC 59.005 45.455 0.00 0.00 41.33 2.85
7738 8337 2.349580 GCGTTAGATTCGGTTGTTACCC 59.650 50.000 0.00 0.00 41.75 3.69
7739 8338 3.587923 CGTTAGATTCGGTTGTTACCCA 58.412 45.455 0.00 0.00 41.75 4.51
7740 8339 3.368843 CGTTAGATTCGGTTGTTACCCAC 59.631 47.826 0.00 0.00 41.75 4.61
7741 8340 2.484742 AGATTCGGTTGTTACCCACC 57.515 50.000 0.00 0.00 41.75 4.61
7742 8341 1.081094 GATTCGGTTGTTACCCACCG 58.919 55.000 14.73 14.73 46.06 4.94
7743 8342 0.397564 ATTCGGTTGTTACCCACCGT 59.602 50.000 18.60 2.80 45.06 4.83
7744 8343 0.179936 TTCGGTTGTTACCCACCGTT 59.820 50.000 18.60 0.00 45.06 4.44
7745 8344 1.043816 TCGGTTGTTACCCACCGTTA 58.956 50.000 18.60 2.80 45.06 3.18
7746 8345 1.000731 TCGGTTGTTACCCACCGTTAG 59.999 52.381 18.60 0.00 45.06 2.34
7747 8346 1.000731 CGGTTGTTACCCACCGTTAGA 59.999 52.381 13.19 0.00 41.75 2.10
7748 8347 2.354003 CGGTTGTTACCCACCGTTAGAT 60.354 50.000 13.19 0.00 41.75 1.98
7749 8348 3.264947 GGTTGTTACCCACCGTTAGATC 58.735 50.000 0.00 0.00 38.60 2.75
7750 8349 3.306919 GGTTGTTACCCACCGTTAGATCA 60.307 47.826 0.00 0.00 38.60 2.92
7751 8350 3.880047 TGTTACCCACCGTTAGATCAG 57.120 47.619 0.00 0.00 0.00 2.90
7752 8351 2.498481 TGTTACCCACCGTTAGATCAGG 59.502 50.000 0.00 0.00 0.00 3.86
7753 8352 1.117150 TACCCACCGTTAGATCAGGC 58.883 55.000 0.00 0.00 0.00 4.85
7754 8353 1.146263 CCCACCGTTAGATCAGGCC 59.854 63.158 0.00 0.00 0.00 5.19
7755 8354 1.338136 CCCACCGTTAGATCAGGCCT 61.338 60.000 0.00 0.00 0.00 5.19
7756 8355 0.541863 CCACCGTTAGATCAGGCCTT 59.458 55.000 0.00 0.00 0.00 4.35
7757 8356 1.065418 CCACCGTTAGATCAGGCCTTT 60.065 52.381 0.00 0.00 0.00 3.11
7758 8357 2.618045 CCACCGTTAGATCAGGCCTTTT 60.618 50.000 0.00 0.00 0.00 2.27
7759 8358 2.420022 CACCGTTAGATCAGGCCTTTTG 59.580 50.000 0.00 0.00 0.00 2.44
7760 8359 1.401905 CCGTTAGATCAGGCCTTTTGC 59.598 52.381 0.00 0.00 40.16 3.68
7761 8360 2.359900 CGTTAGATCAGGCCTTTTGCT 58.640 47.619 0.00 0.25 40.92 3.91
7762 8361 2.749621 CGTTAGATCAGGCCTTTTGCTT 59.250 45.455 0.00 0.00 40.92 3.91
7763 8362 3.191371 CGTTAGATCAGGCCTTTTGCTTT 59.809 43.478 0.00 0.00 40.92 3.51
7764 8363 4.321230 CGTTAGATCAGGCCTTTTGCTTTT 60.321 41.667 0.00 0.00 40.92 2.27
7765 8364 5.541845 GTTAGATCAGGCCTTTTGCTTTTT 58.458 37.500 0.00 0.00 40.92 1.94
7788 8387 6.591313 TTTTTCCTTAAACAAAACGGCATC 57.409 33.333 0.00 0.00 0.00 3.91
7789 8388 3.926821 TCCTTAAACAAAACGGCATCC 57.073 42.857 0.00 0.00 0.00 3.51
7802 8401 2.997485 GGCATCCGATCCAAAATAGC 57.003 50.000 0.00 0.00 0.00 2.97
7803 8402 2.229792 GGCATCCGATCCAAAATAGCA 58.770 47.619 0.00 0.00 0.00 3.49
7804 8403 2.821969 GGCATCCGATCCAAAATAGCAT 59.178 45.455 0.00 0.00 0.00 3.79
7805 8404 3.119708 GGCATCCGATCCAAAATAGCATC 60.120 47.826 0.00 0.00 0.00 3.91
7806 8405 3.425359 GCATCCGATCCAAAATAGCATCG 60.425 47.826 0.00 0.00 38.28 3.84
7807 8406 2.143122 TCCGATCCAAAATAGCATCGC 58.857 47.619 0.00 0.00 37.42 4.58
7808 8407 2.146342 CCGATCCAAAATAGCATCGCT 58.854 47.619 0.00 0.00 43.41 4.93
7809 8408 2.096069 CCGATCCAAAATAGCATCGCTG 60.096 50.000 0.00 0.00 40.10 5.18
7810 8409 2.096069 CGATCCAAAATAGCATCGCTGG 60.096 50.000 0.00 0.00 40.10 4.85
7811 8410 2.708216 TCCAAAATAGCATCGCTGGA 57.292 45.000 0.00 0.00 40.10 3.86
7812 8411 2.288666 TCCAAAATAGCATCGCTGGAC 58.711 47.619 0.00 0.00 40.10 4.02
7813 8412 2.016318 CCAAAATAGCATCGCTGGACA 58.984 47.619 0.00 0.00 40.10 4.02
7814 8413 2.620115 CCAAAATAGCATCGCTGGACAT 59.380 45.455 0.00 0.00 40.10 3.06
7815 8414 3.304257 CCAAAATAGCATCGCTGGACATC 60.304 47.826 0.00 0.00 40.10 3.06
7816 8415 2.175878 AATAGCATCGCTGGACATCC 57.824 50.000 0.00 0.00 40.10 3.51
7817 8416 1.051008 ATAGCATCGCTGGACATCCA 58.949 50.000 0.00 0.00 45.30 3.41
7818 8417 1.051008 TAGCATCGCTGGACATCCAT 58.949 50.000 0.00 0.00 46.46 3.41
7819 8418 0.534427 AGCATCGCTGGACATCCATG 60.534 55.000 0.00 0.00 46.46 3.66
7820 8419 0.533531 GCATCGCTGGACATCCATGA 60.534 55.000 0.00 3.39 46.46 3.07
7821 8420 1.224075 CATCGCTGGACATCCATGAC 58.776 55.000 0.00 0.00 46.46 3.06
7822 8421 0.249615 ATCGCTGGACATCCATGACG 60.250 55.000 0.00 6.45 46.46 4.35
7823 8422 2.528743 CGCTGGACATCCATGACGC 61.529 63.158 0.00 0.43 46.46 5.19
7824 8423 1.153289 GCTGGACATCCATGACGCT 60.153 57.895 0.00 0.00 46.46 5.07
7825 8424 0.745845 GCTGGACATCCATGACGCTT 60.746 55.000 0.00 0.00 46.46 4.68
7826 8425 1.012086 CTGGACATCCATGACGCTTG 58.988 55.000 0.00 0.00 46.46 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 0.602638 TGCTGCTACGTGTTCTTGGG 60.603 55.000 0.00 0.00 0.00 4.12
42 43 1.397190 CGTTGCTGCTACGTGTTCTTG 60.397 52.381 24.51 0.00 34.47 3.02
79 99 0.246910 GAAGGAACGGGGTGTCTCTC 59.753 60.000 0.00 0.00 0.00 3.20
80 100 1.192803 GGAAGGAACGGGGTGTCTCT 61.193 60.000 0.00 0.00 0.00 3.10
82 102 0.767060 AAGGAAGGAACGGGGTGTCT 60.767 55.000 0.00 0.00 0.00 3.41
84 104 1.057851 TGAAGGAAGGAACGGGGTGT 61.058 55.000 0.00 0.00 0.00 4.16
86 106 0.618981 GATGAAGGAAGGAACGGGGT 59.381 55.000 0.00 0.00 0.00 4.95
87 107 0.107165 GGATGAAGGAAGGAACGGGG 60.107 60.000 0.00 0.00 0.00 5.73
88 108 0.618458 TGGATGAAGGAAGGAACGGG 59.382 55.000 0.00 0.00 0.00 5.28
89 109 2.565841 GATGGATGAAGGAAGGAACGG 58.434 52.381 0.00 0.00 0.00 4.44
90 110 2.092968 TGGATGGATGAAGGAAGGAACG 60.093 50.000 0.00 0.00 0.00 3.95
91 111 3.652057 TGGATGGATGAAGGAAGGAAC 57.348 47.619 0.00 0.00 0.00 3.62
92 112 3.139025 GGATGGATGGATGAAGGAAGGAA 59.861 47.826 0.00 0.00 0.00 3.36
94 114 2.444388 TGGATGGATGGATGAAGGAAGG 59.556 50.000 0.00 0.00 0.00 3.46
95 115 3.870538 TGGATGGATGGATGAAGGAAG 57.129 47.619 0.00 0.00 0.00 3.46
96 116 3.074985 GGATGGATGGATGGATGAAGGAA 59.925 47.826 0.00 0.00 0.00 3.36
98 118 2.377531 TGGATGGATGGATGGATGAAGG 59.622 50.000 0.00 0.00 0.00 3.46
99 119 3.801307 TGGATGGATGGATGGATGAAG 57.199 47.619 0.00 0.00 0.00 3.02
100 120 3.010920 GGATGGATGGATGGATGGATGAA 59.989 47.826 0.00 0.00 0.00 2.57
101 121 2.579400 GGATGGATGGATGGATGGATGA 59.421 50.000 0.00 0.00 0.00 2.92
102 122 2.682858 CGGATGGATGGATGGATGGATG 60.683 54.545 0.00 0.00 0.00 3.51
103 123 1.562942 CGGATGGATGGATGGATGGAT 59.437 52.381 0.00 0.00 0.00 3.41
104 124 0.986527 CGGATGGATGGATGGATGGA 59.013 55.000 0.00 0.00 0.00 3.41
105 125 0.694771 ACGGATGGATGGATGGATGG 59.305 55.000 0.00 0.00 0.00 3.51
106 126 1.817357 CACGGATGGATGGATGGATG 58.183 55.000 0.00 0.00 0.00 3.51
107 127 0.037303 GCACGGATGGATGGATGGAT 59.963 55.000 0.00 0.00 0.00 3.41
108 128 1.451504 GCACGGATGGATGGATGGA 59.548 57.895 0.00 0.00 0.00 3.41
109 129 1.962822 CGCACGGATGGATGGATGG 60.963 63.158 0.00 0.00 0.00 3.51
110 130 2.610694 GCGCACGGATGGATGGATG 61.611 63.158 0.30 0.00 0.00 3.51
111 131 2.281070 GCGCACGGATGGATGGAT 60.281 61.111 0.30 0.00 0.00 3.41
112 132 3.469970 AGCGCACGGATGGATGGA 61.470 61.111 11.47 0.00 0.00 3.41
113 133 3.274586 CAGCGCACGGATGGATGG 61.275 66.667 11.47 0.00 0.00 3.51
114 134 3.945434 GCAGCGCACGGATGGATG 61.945 66.667 11.47 0.00 31.06 3.51
130 154 2.023320 GCGTCTAAATGCAGCGGC 59.977 61.111 0.31 0.31 37.37 6.53
143 167 2.161609 AGATTCGGTGGATTTTTGCGTC 59.838 45.455 0.00 0.00 0.00 5.19
208 234 4.293671 TGGGAACAAAGGCGGGGG 62.294 66.667 0.00 0.00 37.44 5.40
250 277 4.219999 GGCGAGAGAGCTCAGGGC 62.220 72.222 17.77 12.99 41.36 5.19
251 278 2.757508 TGGCGAGAGAGCTCAGGG 60.758 66.667 17.77 3.06 41.36 4.45
252 279 2.806929 CTGGCGAGAGAGCTCAGG 59.193 66.667 17.77 2.69 41.36 3.86
253 280 2.104729 GCTGGCGAGAGAGCTCAG 59.895 66.667 17.77 4.11 41.36 3.35
254 281 3.819920 CGCTGGCGAGAGAGCTCA 61.820 66.667 17.77 0.00 41.36 4.26
255 282 4.567385 CCGCTGGCGAGAGAGCTC 62.567 72.222 16.79 5.27 42.83 4.09
1398 1443 2.731976 GTCGTCATCACTGAACTCCAAC 59.268 50.000 0.00 0.00 31.85 3.77
1407 1452 1.008875 CACCGGTGTCGTCATCACTG 61.009 60.000 26.95 0.00 40.59 3.66
1872 1917 5.237815 AGCGTCTCAATCAACTTTGATACA 58.762 37.500 4.89 0.00 46.60 2.29
2073 2118 6.293626 GCATCCATATGTCATGAAAGTACCAC 60.294 42.308 13.60 0.00 35.38 4.16
2157 2202 2.159099 GGTGGCTATCAATGTCGAGACA 60.159 50.000 8.48 8.48 46.44 3.41
2160 2205 1.491670 CGGTGGCTATCAATGTCGAG 58.508 55.000 0.00 0.00 0.00 4.04
2241 2286 0.384669 GCTCATCCTTTGCTGCCATC 59.615 55.000 0.00 0.00 0.00 3.51
2308 2353 2.356278 GTCCTCCCATGCCTGCAA 59.644 61.111 0.00 0.00 0.00 4.08
2331 2376 6.784473 TCCTCATCTCTTCAAGCATTATCCTA 59.216 38.462 0.00 0.00 0.00 2.94
2358 2403 0.178995 TGAGCCACCTGCATTCAACA 60.179 50.000 0.00 0.00 44.83 3.33
2394 2439 1.227734 AAACGTAACTGCGGCCTGT 60.228 52.632 0.00 0.00 35.98 4.00
2424 2469 1.270625 ACCGAGACAAAGATTGGCGAA 60.271 47.619 0.00 0.00 45.70 4.70
2442 2487 2.812011 ACAAGTGCCGAAAGTTATGACC 59.188 45.455 0.00 0.00 0.00 4.02
2508 2553 7.569111 TCTTGAAGGATCCTAAAGGTAGCTAAT 59.431 37.037 25.94 5.56 36.34 1.73
2514 2559 4.409247 GGCTCTTGAAGGATCCTAAAGGTA 59.591 45.833 25.94 13.92 36.34 3.08
2517 2562 4.408596 AGAGGCTCTTGAAGGATCCTAAAG 59.591 45.833 22.81 22.81 32.71 1.85
2664 2709 5.509670 CCTGATATCGATTGCCTTGTCTGTA 60.510 44.000 1.71 0.00 0.00 2.74
2687 2732 1.004745 TCCAAGAGAAACTGCCATCCC 59.995 52.381 0.00 0.00 0.00 3.85
2712 2757 1.279271 AGCGTAGGGTTTGAGCAAGAT 59.721 47.619 0.00 0.00 0.00 2.40
2723 2768 4.368565 TGTATATCAGAGAGCGTAGGGT 57.631 45.455 0.00 0.00 0.00 4.34
2730 2775 6.920758 CCACACTAAGTTGTATATCAGAGAGC 59.079 42.308 0.00 0.00 0.00 4.09
2733 2778 7.772166 TCACCACACTAAGTTGTATATCAGAG 58.228 38.462 0.00 0.00 0.00 3.35
2737 2782 7.203910 CCTCTCACCACACTAAGTTGTATATC 58.796 42.308 0.00 0.00 0.00 1.63
2793 2838 5.415701 GGACAATAGACTTGATTTGCCAGAA 59.584 40.000 0.00 0.00 0.00 3.02
2840 2885 1.059913 ACTTACTTGGCCAGACAGCT 58.940 50.000 5.11 0.00 0.00 4.24
2841 2886 2.289444 TGTACTTACTTGGCCAGACAGC 60.289 50.000 5.11 0.00 0.00 4.40
2863 2908 7.912250 AGCATCAACTCTCTTTATTTTTATGCG 59.088 33.333 0.00 0.00 39.70 4.73
2873 2920 8.939929 CATTCAAGTTAGCATCAACTCTCTTTA 58.060 33.333 0.00 0.00 37.78 1.85
2874 2921 7.663081 TCATTCAAGTTAGCATCAACTCTCTTT 59.337 33.333 0.00 0.00 37.78 2.52
2875 2922 7.118971 GTCATTCAAGTTAGCATCAACTCTCTT 59.881 37.037 0.00 0.00 37.78 2.85
2876 2923 6.593382 GTCATTCAAGTTAGCATCAACTCTCT 59.407 38.462 0.00 0.00 37.78 3.10
2877 2924 6.369890 TGTCATTCAAGTTAGCATCAACTCTC 59.630 38.462 0.00 0.00 37.78 3.20
2902 2949 8.523658 GGAGCAGAAGGAAAATGTAATTAAACT 58.476 33.333 0.00 0.00 33.67 2.66
2943 2990 3.135348 ACATATGCTGCTGTACCACTGAT 59.865 43.478 1.58 0.00 0.00 2.90
3146 3193 1.690893 AGCTGCACTCTCTGTTTCTGA 59.309 47.619 1.02 0.00 0.00 3.27
3245 3292 8.237949 ACATCGATACAGACCTTAAATAGATCG 58.762 37.037 0.00 0.00 36.02 3.69
3321 3370 8.632679 CCAATATATAGTCCTGCAACACAAAAT 58.367 33.333 0.00 0.00 0.00 1.82
3382 3431 2.496070 TGGTAGGAACTCGACTTGATGG 59.504 50.000 0.00 0.00 41.75 3.51
3429 3478 9.959721 AGGCTAATAGATTTTGTGAGAAAAGTA 57.040 29.630 0.00 0.00 0.00 2.24
3443 3492 9.905713 TTGAACAACTCAATAGGCTAATAGATT 57.094 29.630 0.00 0.00 39.20 2.40
3459 3560 5.092781 ACAACACGTCAAATTGAACAACTC 58.907 37.500 0.00 0.00 0.00 3.01
3496 3597 7.249147 CAGAATCTGCTGGTTTTTCTAATCAG 58.751 38.462 0.00 0.00 32.26 2.90
3532 3634 7.932120 TGAGAAGTATTAGAAAAGATAGCGC 57.068 36.000 0.00 0.00 0.00 5.92
3542 3644 8.593679 TGAACAGTCCAATGAGAAGTATTAGAA 58.406 33.333 0.00 0.00 0.00 2.10
3544 3646 8.824781 CATGAACAGTCCAATGAGAAGTATTAG 58.175 37.037 0.00 0.00 0.00 1.73
3559 3746 3.490348 CCCATTATCCCATGAACAGTCC 58.510 50.000 0.00 0.00 0.00 3.85
3570 3757 1.713078 AGATCAAGGGCCCATTATCCC 59.287 52.381 27.56 6.53 42.94 3.85
3612 3799 2.749621 CCTTAAGAACCTGTGCCATGAC 59.250 50.000 3.36 0.00 0.00 3.06
3773 3960 5.008217 TGGTGTCAATCTTTTGTTAGGAACG 59.992 40.000 0.00 0.00 34.32 3.95
3845 4032 7.772332 AATTCCACGTGTATTAGATGACTTC 57.228 36.000 15.65 0.00 0.00 3.01
3962 4149 1.308877 AGGCTTCCCCCATGTATGTT 58.691 50.000 0.00 0.00 0.00 2.71
3998 4185 0.955428 GCGCCAAGACAATGAGTGGA 60.955 55.000 0.00 0.00 32.54 4.02
4333 4520 2.071778 AAGCCACACAGGTGTCAAAT 57.928 45.000 1.31 0.00 42.83 2.32
4338 4525 3.290948 TTAGAAAAGCCACACAGGTGT 57.709 42.857 0.00 0.00 46.17 4.16
4342 4529 4.619973 TGCAAATTAGAAAAGCCACACAG 58.380 39.130 0.00 0.00 0.00 3.66
4343 4530 4.662468 TGCAAATTAGAAAAGCCACACA 57.338 36.364 0.00 0.00 0.00 3.72
4452 4643 6.348621 AGTTGAATTGTTGTTGATGCAAAC 57.651 33.333 0.00 0.00 0.00 2.93
4500 4691 3.067180 ACAGAACTTGCCATGTGACTTTG 59.933 43.478 0.00 0.00 0.00 2.77
4533 4724 1.066471 TGCATGCCATAGCCATAGGA 58.934 50.000 16.68 0.00 38.69 2.94
4589 4780 4.887655 CCCAGGTAATGTTAGCCCTAAAAG 59.112 45.833 0.00 0.00 31.76 2.27
4596 4787 2.711547 AGGATCCCAGGTAATGTTAGCC 59.288 50.000 8.55 0.00 31.76 3.93
4600 4791 7.652554 AGAAATTAAGGATCCCAGGTAATGTT 58.347 34.615 8.55 5.53 0.00 2.71
4637 4851 8.972458 TTGCTATCTGCCTTATTTGTATTACA 57.028 30.769 0.00 0.00 42.00 2.41
4643 4857 4.210331 CCCTTGCTATCTGCCTTATTTGT 58.790 43.478 0.00 0.00 42.00 2.83
4647 4861 4.493618 TCTACCCTTGCTATCTGCCTTAT 58.506 43.478 0.00 0.00 42.00 1.73
4651 4865 3.578716 TGTATCTACCCTTGCTATCTGCC 59.421 47.826 0.00 0.00 42.00 4.85
4653 4867 4.835615 AGGTGTATCTACCCTTGCTATCTG 59.164 45.833 0.00 0.00 41.83 2.90
4669 4883 8.850156 GTGATTCATTTAGCCATTTAGGTGTAT 58.150 33.333 0.00 0.00 40.61 2.29
4685 4899 8.190122 TGCGCATAATTCTTTAGTGATTCATTT 58.810 29.630 5.66 0.00 0.00 2.32
4689 4903 6.486248 TGTGCGCATAATTCTTTAGTGATTC 58.514 36.000 15.91 0.00 0.00 2.52
4690 4904 6.435430 TGTGCGCATAATTCTTTAGTGATT 57.565 33.333 15.91 0.00 0.00 2.57
4691 4905 6.624352 ATGTGCGCATAATTCTTTAGTGAT 57.376 33.333 15.91 0.00 32.73 3.06
4692 4906 7.546778 TTATGTGCGCATAATTCTTTAGTGA 57.453 32.000 25.09 2.59 41.22 3.41
4721 4935 4.100808 AGTTAAATGACAAAGGCAGCCAAA 59.899 37.500 15.80 0.00 0.00 3.28
4722 4936 3.640967 AGTTAAATGACAAAGGCAGCCAA 59.359 39.130 15.80 0.00 0.00 4.52
4723 4937 3.230134 AGTTAAATGACAAAGGCAGCCA 58.770 40.909 15.80 0.00 0.00 4.75
4728 4942 4.415735 GCTGCTAGTTAAATGACAAAGGC 58.584 43.478 0.00 0.00 0.00 4.35
4732 4946 6.588719 AATTGGCTGCTAGTTAAATGACAA 57.411 33.333 0.00 0.00 0.00 3.18
4738 4952 6.242396 TCTGGTTAATTGGCTGCTAGTTAAA 58.758 36.000 13.63 1.54 0.00 1.52
4745 4959 3.084786 GTTCTCTGGTTAATTGGCTGCT 58.915 45.455 0.00 0.00 0.00 4.24
4746 4960 2.819608 TGTTCTCTGGTTAATTGGCTGC 59.180 45.455 0.00 0.00 0.00 5.25
4747 4961 6.732154 CATATGTTCTCTGGTTAATTGGCTG 58.268 40.000 0.00 0.00 0.00 4.85
4768 4982 6.947644 ACTTTCATGCTGAACATATGCATA 57.052 33.333 9.27 9.27 44.39 3.14
4814 5028 5.758296 CAGGCCTCGTGCTTTAAGAATAATA 59.242 40.000 0.00 0.00 40.92 0.98
4818 5032 2.290323 ACAGGCCTCGTGCTTTAAGAAT 60.290 45.455 0.00 0.00 40.92 2.40
4821 5035 0.798776 CACAGGCCTCGTGCTTTAAG 59.201 55.000 18.37 0.70 40.92 1.85
4822 5036 0.107831 ACACAGGCCTCGTGCTTTAA 59.892 50.000 25.86 0.00 40.92 1.52
4823 5037 0.107831 AACACAGGCCTCGTGCTTTA 59.892 50.000 25.86 0.00 40.92 1.85
4824 5038 1.152963 AACACAGGCCTCGTGCTTT 60.153 52.632 25.86 15.76 40.92 3.51
4825 5039 1.598130 GAACACAGGCCTCGTGCTT 60.598 57.895 25.86 20.28 40.92 3.91
4827 5041 1.845809 CTTGAACACAGGCCTCGTGC 61.846 60.000 25.86 16.35 37.93 5.34
4828 5042 0.249868 TCTTGAACACAGGCCTCGTG 60.250 55.000 24.89 24.89 40.32 4.35
4830 5044 2.544685 CTATCTTGAACACAGGCCTCG 58.455 52.381 0.00 0.00 0.00 4.63
4831 5045 2.093235 AGCTATCTTGAACACAGGCCTC 60.093 50.000 0.00 0.00 0.00 4.70
4833 5047 2.409948 AGCTATCTTGAACACAGGCC 57.590 50.000 0.00 0.00 0.00 5.19
4956 5173 2.627699 CAAGATCCTAGTCAGCTCCCTC 59.372 54.545 0.00 0.00 0.00 4.30
5166 5383 4.926860 GCAGAAAGCAAACACAAAAGTT 57.073 36.364 0.00 0.00 44.79 2.66
5255 5472 4.793071 TCATAAAATGCAACAGAACGGTG 58.207 39.130 0.00 0.00 0.00 4.94
5256 5473 5.415701 AGATCATAAAATGCAACAGAACGGT 59.584 36.000 0.00 0.00 0.00 4.83
5284 5503 7.495934 CACCTAACAAGTGATCTATTGGGTAAG 59.504 40.741 12.95 6.24 37.42 2.34
5390 5609 2.678934 ACAGCAAGCCCAGCCATG 60.679 61.111 0.00 0.00 0.00 3.66
5540 5759 2.513897 GGGGGACGGCAATTCTCG 60.514 66.667 0.00 0.00 0.00 4.04
5614 5833 6.627395 TGACAAATAAATAATGGCTACGGG 57.373 37.500 0.00 0.00 0.00 5.28
5630 5849 7.148018 ACGAAGAGCAAATGGATAATGACAAAT 60.148 33.333 0.00 0.00 0.00 2.32
5631 5850 6.150976 ACGAAGAGCAAATGGATAATGACAAA 59.849 34.615 0.00 0.00 0.00 2.83
5633 5852 5.185454 ACGAAGAGCAAATGGATAATGACA 58.815 37.500 0.00 0.00 0.00 3.58
5634 5853 5.741388 ACGAAGAGCAAATGGATAATGAC 57.259 39.130 0.00 0.00 0.00 3.06
5635 5854 9.725019 ATATAACGAAGAGCAAATGGATAATGA 57.275 29.630 0.00 0.00 0.00 2.57
5686 5905 9.778741 TGTTCAGCTTAGAAGAAGAAAAATAGA 57.221 29.630 0.00 0.00 0.00 1.98
5719 5938 7.486551 GCACAATAAGATGCCGTAAATAAAACA 59.513 33.333 0.00 0.00 35.73 2.83
5778 5997 4.506625 CCATGTAGAACAAAGGGAAGGTCA 60.507 45.833 0.00 0.00 0.00 4.02
5790 6009 4.955811 ACAACTGACTCCATGTAGAACA 57.044 40.909 0.00 0.00 0.00 3.18
5823 6042 5.022787 CCTACAATCCCAATCTTTTTCCCA 58.977 41.667 0.00 0.00 0.00 4.37
5847 6066 4.618920 AGATTTACCACTTCCAGTTCGT 57.381 40.909 0.00 0.00 0.00 3.85
5905 6124 5.360714 TGTCAATGATAATTTTCCCTCCTGC 59.639 40.000 0.00 0.00 0.00 4.85
5939 6158 1.065102 CATGAAGGCCAATCGCAGAAG 59.935 52.381 5.01 0.00 43.58 2.85
6073 6292 0.455410 GCATAAAAGCGACCATGGCA 59.545 50.000 13.04 0.00 0.00 4.92
6134 6353 6.174720 TCTCTAGTGCCTGAAAGAAAAGAA 57.825 37.500 0.00 0.00 34.07 2.52
6137 6356 5.930135 ACTTCTCTAGTGCCTGAAAGAAAA 58.070 37.500 0.00 0.00 35.19 2.29
6267 6487 1.710013 ACGAGGTGTCATGCTTTACG 58.290 50.000 0.00 0.00 0.00 3.18
6464 6688 2.414806 CTGCGGATGATCTTCTGGATG 58.585 52.381 16.80 6.74 34.33 3.51
6476 6700 1.645455 CCTGAATTCGCTGCGGATG 59.355 57.895 23.03 7.18 0.00 3.51
6479 6703 1.097547 AATCCCTGAATTCGCTGCGG 61.098 55.000 23.03 4.39 0.00 5.69
6605 6851 7.132213 ACGATCAGTAAGAAACAAAACATGTG 58.868 34.615 0.00 0.00 42.99 3.21
6652 6905 5.511545 CCAAGAACAGTGTTTAGCTAGGAGT 60.512 44.000 10.45 0.00 0.00 3.85
6661 6914 4.265893 TGTTGCTCCAAGAACAGTGTTTA 58.734 39.130 10.45 0.00 0.00 2.01
6675 6928 0.605589 ACCGTAAAGGCTGTTGCTCC 60.606 55.000 0.00 0.00 46.52 4.70
6677 6930 0.107831 TCACCGTAAAGGCTGTTGCT 59.892 50.000 0.00 0.00 46.52 3.91
6679 6932 3.252215 TGAATTCACCGTAAAGGCTGTTG 59.748 43.478 3.38 0.00 46.52 3.33
6712 6988 7.088272 ACTCCGCAATTTTACCTGAAATAAAC 58.912 34.615 0.00 0.00 0.00 2.01
6775 7052 3.677121 CGGATACTAGCTGCATGAACATC 59.323 47.826 1.02 0.00 0.00 3.06
6929 7209 1.141881 CTGTCTTGCGTCGCCCTAT 59.858 57.895 15.88 0.00 0.00 2.57
6930 7210 2.571757 CTGTCTTGCGTCGCCCTA 59.428 61.111 15.88 0.00 0.00 3.53
6931 7211 4.379243 CCTGTCTTGCGTCGCCCT 62.379 66.667 15.88 0.00 0.00 5.19
6932 7212 4.373116 TCCTGTCTTGCGTCGCCC 62.373 66.667 15.88 0.46 0.00 6.13
6933 7213 2.811317 CTCCTGTCTTGCGTCGCC 60.811 66.667 15.88 0.00 0.00 5.54
6934 7214 2.564553 ATCCTCCTGTCTTGCGTCGC 62.565 60.000 11.10 11.10 0.00 5.19
6935 7215 0.738975 TATCCTCCTGTCTTGCGTCG 59.261 55.000 0.00 0.00 0.00 5.12
6936 7216 1.067821 CCTATCCTCCTGTCTTGCGTC 59.932 57.143 0.00 0.00 0.00 5.19
6937 7217 1.115467 CCTATCCTCCTGTCTTGCGT 58.885 55.000 0.00 0.00 0.00 5.24
6938 7218 1.339610 CTCCTATCCTCCTGTCTTGCG 59.660 57.143 0.00 0.00 0.00 4.85
6939 7219 2.627699 CTCTCCTATCCTCCTGTCTTGC 59.372 54.545 0.00 0.00 0.00 4.01
6940 7220 3.230134 CCTCTCCTATCCTCCTGTCTTG 58.770 54.545 0.00 0.00 0.00 3.02
6941 7221 2.862597 ACCTCTCCTATCCTCCTGTCTT 59.137 50.000 0.00 0.00 0.00 3.01
6964 7244 1.401018 GGCGTTTCTTTCCCGTTCATG 60.401 52.381 0.00 0.00 0.00 3.07
7008 7288 2.700897 CCCTCGAAGTAGAATCCATGGT 59.299 50.000 12.58 0.00 0.00 3.55
7020 7300 4.736896 GCCGCGTTCCCTCGAAGT 62.737 66.667 4.92 0.00 0.00 3.01
7049 7329 3.636231 CCAACTCCTCCCGTGGCA 61.636 66.667 0.00 0.00 0.00 4.92
7101 7381 3.586892 GGGAGAAGCAGTACAGTGTTAC 58.413 50.000 0.00 0.00 0.00 2.50
7229 7511 7.225931 ACACAGAACAGTTTCAATACGTAACAT 59.774 33.333 0.00 0.00 33.72 2.71
7235 7520 6.573725 GCTAAACACAGAACAGTTTCAATACG 59.426 38.462 0.00 0.00 38.71 3.06
7236 7521 6.856426 GGCTAAACACAGAACAGTTTCAATAC 59.144 38.462 0.00 0.00 38.71 1.89
7240 7525 3.630312 GGGCTAAACACAGAACAGTTTCA 59.370 43.478 0.00 0.00 38.71 2.69
7241 7526 3.303791 CGGGCTAAACACAGAACAGTTTC 60.304 47.826 0.00 0.00 38.71 2.78
7262 7547 3.119743 ACATCCACTGCATCACATTTTCG 60.120 43.478 0.00 0.00 0.00 3.46
7274 7559 1.353103 GCACGCATACATCCACTGC 59.647 57.895 0.00 0.00 0.00 4.40
7283 7568 2.004583 TGACTACCTTGCACGCATAC 57.995 50.000 0.00 0.00 0.00 2.39
7288 7573 4.154015 TCATGATTTTGACTACCTTGCACG 59.846 41.667 0.00 0.00 0.00 5.34
7289 7574 5.627499 TCATGATTTTGACTACCTTGCAC 57.373 39.130 0.00 0.00 0.00 4.57
7334 7619 4.852609 ATTTGCGTTACGATCCTACAAC 57.147 40.909 9.62 0.00 0.00 3.32
7335 7620 4.691685 ACAATTTGCGTTACGATCCTACAA 59.308 37.500 9.62 0.00 0.00 2.41
7336 7621 4.247258 ACAATTTGCGTTACGATCCTACA 58.753 39.130 9.62 0.00 0.00 2.74
7337 7622 4.852609 ACAATTTGCGTTACGATCCTAC 57.147 40.909 9.62 0.00 0.00 3.18
7339 7624 4.751060 TCTACAATTTGCGTTACGATCCT 58.249 39.130 9.62 0.00 0.00 3.24
7340 7625 5.459110 TTCTACAATTTGCGTTACGATCC 57.541 39.130 9.62 0.00 0.00 3.36
7341 7626 6.701937 TGATTCTACAATTTGCGTTACGATC 58.298 36.000 9.62 0.00 0.00 3.69
7344 7629 8.114290 AGTTATGATTCTACAATTTGCGTTACG 58.886 33.333 0.00 0.00 0.00 3.18
7355 7654 9.197306 TGGAGCTAAGTAGTTATGATTCTACAA 57.803 33.333 0.00 0.00 38.97 2.41
7418 7718 9.669353 CAGATGTATAGGCACATTTTTATGTTC 57.331 33.333 0.00 0.00 39.25 3.18
7425 7725 8.874156 TCTAGATCAGATGTATAGGCACATTTT 58.126 33.333 0.00 0.00 39.25 1.82
7427 7727 7.892771 TCTCTAGATCAGATGTATAGGCACATT 59.107 37.037 0.00 0.00 39.25 2.71
7429 7729 6.784031 TCTCTAGATCAGATGTATAGGCACA 58.216 40.000 0.00 0.00 31.13 4.57
7430 7730 7.695480 TTCTCTAGATCAGATGTATAGGCAC 57.305 40.000 0.00 0.00 31.13 5.01
7431 7731 8.712228 TTTTCTCTAGATCAGATGTATAGGCA 57.288 34.615 0.00 0.00 31.13 4.75
7476 8066 9.877178 GAAATCTATTACTCCATCCGTTCATAT 57.123 33.333 0.00 0.00 0.00 1.78
7501 8091 7.598248 TCTAAACCAACCCCTATGATAGTAGA 58.402 38.462 0.00 0.00 0.00 2.59
7515 8105 4.514066 ACAACTTCACGATCTAAACCAACC 59.486 41.667 0.00 0.00 0.00 3.77
7529 8119 6.758593 TTGTGTACGATTCTACAACTTCAC 57.241 37.500 0.00 0.00 0.00 3.18
7544 8134 3.176708 CAGGTAGTCGGAATTGTGTACG 58.823 50.000 0.00 0.00 0.00 3.67
7548 8138 4.755411 ACATACAGGTAGTCGGAATTGTG 58.245 43.478 0.00 0.00 0.00 3.33
7549 8139 5.068723 CCTACATACAGGTAGTCGGAATTGT 59.931 44.000 0.91 0.00 39.26 2.71
7550 8140 5.529791 CCTACATACAGGTAGTCGGAATTG 58.470 45.833 0.91 0.00 39.26 2.32
7551 8141 5.786264 CCTACATACAGGTAGTCGGAATT 57.214 43.478 0.91 0.00 39.26 2.17
7600 8199 4.464244 TGAGGAAGTGAGGAAGTACTGATG 59.536 45.833 0.00 0.00 0.00 3.07
7605 8204 3.432378 TCCTGAGGAAGTGAGGAAGTAC 58.568 50.000 0.00 0.00 32.74 2.73
7606 8205 3.333980 TCTCCTGAGGAAGTGAGGAAGTA 59.666 47.826 1.41 0.00 35.43 2.24
7607 8206 2.110899 TCTCCTGAGGAAGTGAGGAAGT 59.889 50.000 1.41 0.00 35.43 3.01
7608 8207 2.813907 TCTCCTGAGGAAGTGAGGAAG 58.186 52.381 1.41 0.00 35.43 3.46
7609 8208 2.900546 GTTCTCCTGAGGAAGTGAGGAA 59.099 50.000 1.41 0.00 35.43 3.36
7610 8209 2.110899 AGTTCTCCTGAGGAAGTGAGGA 59.889 50.000 1.41 0.00 34.61 3.71
7611 8210 2.534990 AGTTCTCCTGAGGAAGTGAGG 58.465 52.381 1.41 0.00 0.00 3.86
7612 8211 4.340617 ACTAGTTCTCCTGAGGAAGTGAG 58.659 47.826 1.41 0.00 0.00 3.51
7613 8212 4.337145 GACTAGTTCTCCTGAGGAAGTGA 58.663 47.826 7.47 0.00 0.00 3.41
7614 8213 3.127895 CGACTAGTTCTCCTGAGGAAGTG 59.872 52.174 7.47 0.00 0.00 3.16
7615 8214 3.349022 CGACTAGTTCTCCTGAGGAAGT 58.651 50.000 1.41 2.06 0.00 3.01
7616 8215 2.685897 CCGACTAGTTCTCCTGAGGAAG 59.314 54.545 1.41 0.00 0.00 3.46
7617 8216 2.620886 CCCGACTAGTTCTCCTGAGGAA 60.621 54.545 1.41 0.00 0.00 3.36
7618 8217 1.064611 CCCGACTAGTTCTCCTGAGGA 60.065 57.143 0.00 0.00 0.00 3.71
7619 8218 1.394618 CCCGACTAGTTCTCCTGAGG 58.605 60.000 0.00 0.00 0.00 3.86
7620 8219 1.064611 TCCCCGACTAGTTCTCCTGAG 60.065 57.143 0.00 0.00 0.00 3.35
7621 8220 0.997363 TCCCCGACTAGTTCTCCTGA 59.003 55.000 0.00 0.00 0.00 3.86
7622 8221 1.848652 TTCCCCGACTAGTTCTCCTG 58.151 55.000 0.00 0.00 0.00 3.86
7623 8222 2.617840 TTTCCCCGACTAGTTCTCCT 57.382 50.000 0.00 0.00 0.00 3.69
7624 8223 2.742204 GCATTTCCCCGACTAGTTCTCC 60.742 54.545 0.00 0.00 0.00 3.71
7625 8224 2.093658 TGCATTTCCCCGACTAGTTCTC 60.094 50.000 0.00 0.00 0.00 2.87
7626 8225 1.906574 TGCATTTCCCCGACTAGTTCT 59.093 47.619 0.00 0.00 0.00 3.01
7627 8226 2.396590 TGCATTTCCCCGACTAGTTC 57.603 50.000 0.00 0.00 0.00 3.01
7628 8227 2.871096 TTGCATTTCCCCGACTAGTT 57.129 45.000 0.00 0.00 0.00 2.24
7629 8228 2.871096 TTTGCATTTCCCCGACTAGT 57.129 45.000 0.00 0.00 0.00 2.57
7630 8229 3.181487 CCATTTTGCATTTCCCCGACTAG 60.181 47.826 0.00 0.00 0.00 2.57
7631 8230 2.757868 CCATTTTGCATTTCCCCGACTA 59.242 45.455 0.00 0.00 0.00 2.59
7632 8231 1.550072 CCATTTTGCATTTCCCCGACT 59.450 47.619 0.00 0.00 0.00 4.18
7633 8232 1.275010 ACCATTTTGCATTTCCCCGAC 59.725 47.619 0.00 0.00 0.00 4.79
7634 8233 1.638529 ACCATTTTGCATTTCCCCGA 58.361 45.000 0.00 0.00 0.00 5.14
7635 8234 2.028203 AGAACCATTTTGCATTTCCCCG 60.028 45.455 0.00 0.00 0.00 5.73
7636 8235 3.337358 CAGAACCATTTTGCATTTCCCC 58.663 45.455 0.00 0.00 0.00 4.81
7637 8236 3.244526 ACCAGAACCATTTTGCATTTCCC 60.245 43.478 0.00 0.00 0.00 3.97
7638 8237 4.006780 ACCAGAACCATTTTGCATTTCC 57.993 40.909 0.00 0.00 0.00 3.13
7639 8238 5.277925 CCAAACCAGAACCATTTTGCATTTC 60.278 40.000 0.00 0.00 0.00 2.17
7640 8239 4.579753 CCAAACCAGAACCATTTTGCATTT 59.420 37.500 0.00 0.00 0.00 2.32
7641 8240 4.136051 CCAAACCAGAACCATTTTGCATT 58.864 39.130 0.00 0.00 0.00 3.56
7642 8241 3.496515 CCCAAACCAGAACCATTTTGCAT 60.497 43.478 0.00 0.00 0.00 3.96
7643 8242 2.158842 CCCAAACCAGAACCATTTTGCA 60.159 45.455 0.00 0.00 0.00 4.08
7644 8243 2.493035 CCCAAACCAGAACCATTTTGC 58.507 47.619 0.00 0.00 0.00 3.68
7645 8244 2.158842 TGCCCAAACCAGAACCATTTTG 60.159 45.455 0.00 0.00 0.00 2.44
7646 8245 2.122768 TGCCCAAACCAGAACCATTTT 58.877 42.857 0.00 0.00 0.00 1.82
7647 8246 1.416030 GTGCCCAAACCAGAACCATTT 59.584 47.619 0.00 0.00 0.00 2.32
7648 8247 1.047801 GTGCCCAAACCAGAACCATT 58.952 50.000 0.00 0.00 0.00 3.16
7649 8248 0.188342 AGTGCCCAAACCAGAACCAT 59.812 50.000 0.00 0.00 0.00 3.55
7650 8249 0.754957 CAGTGCCCAAACCAGAACCA 60.755 55.000 0.00 0.00 0.00 3.67
7651 8250 2.041153 CAGTGCCCAAACCAGAACC 58.959 57.895 0.00 0.00 0.00 3.62
7652 8251 1.109323 AGCAGTGCCCAAACCAGAAC 61.109 55.000 12.58 0.00 0.00 3.01
7653 8252 0.823356 GAGCAGTGCCCAAACCAGAA 60.823 55.000 12.58 0.00 0.00 3.02
7654 8253 1.228245 GAGCAGTGCCCAAACCAGA 60.228 57.895 12.58 0.00 0.00 3.86
7655 8254 2.620112 CGAGCAGTGCCCAAACCAG 61.620 63.158 12.58 0.00 0.00 4.00
7656 8255 2.594303 CGAGCAGTGCCCAAACCA 60.594 61.111 12.58 0.00 0.00 3.67
7657 8256 3.365265 CCGAGCAGTGCCCAAACC 61.365 66.667 12.58 0.00 0.00 3.27
7658 8257 4.043200 GCCGAGCAGTGCCCAAAC 62.043 66.667 12.58 0.00 0.00 2.93
7682 8281 4.717629 GAAAAACTGGGCCGGCGC 62.718 66.667 34.64 34.64 0.00 6.53
7683 8282 4.398598 CGAAAAACTGGGCCGGCG 62.399 66.667 22.54 9.65 0.00 6.46
7684 8283 4.050934 CCGAAAAACTGGGCCGGC 62.051 66.667 21.18 21.18 33.47 6.13
7685 8284 4.050934 GCCGAAAAACTGGGCCGG 62.051 66.667 11.83 11.83 41.01 6.13
7688 8287 4.050934 CCGGCCGAAAAACTGGGC 62.051 66.667 30.73 0.00 46.66 5.36
7689 8288 2.596338 ACCGGCCGAAAAACTGGG 60.596 61.111 30.73 8.96 36.57 4.45
7690 8289 1.894756 TGACCGGCCGAAAAACTGG 60.895 57.895 30.73 9.82 38.37 4.00
7691 8290 1.281656 GTGACCGGCCGAAAAACTG 59.718 57.895 30.73 10.69 0.00 3.16
7692 8291 0.536460 ATGTGACCGGCCGAAAAACT 60.536 50.000 30.73 3.74 0.00 2.66
7693 8292 0.109919 GATGTGACCGGCCGAAAAAC 60.110 55.000 30.73 19.09 0.00 2.43
7694 8293 0.250553 AGATGTGACCGGCCGAAAAA 60.251 50.000 30.73 6.90 0.00 1.94
7695 8294 0.609151 TAGATGTGACCGGCCGAAAA 59.391 50.000 30.73 8.32 0.00 2.29
7696 8295 0.609151 TTAGATGTGACCGGCCGAAA 59.391 50.000 30.73 8.76 0.00 3.46
7697 8296 0.828022 ATTAGATGTGACCGGCCGAA 59.172 50.000 30.73 10.01 0.00 4.30
7698 8297 0.104120 CATTAGATGTGACCGGCCGA 59.896 55.000 30.73 6.25 0.00 5.54
7699 8298 1.498865 GCATTAGATGTGACCGGCCG 61.499 60.000 21.04 21.04 0.00 6.13
7700 8299 1.498865 CGCATTAGATGTGACCGGCC 61.499 60.000 0.00 0.00 43.24 6.13
7701 8300 0.810031 ACGCATTAGATGTGACCGGC 60.810 55.000 0.00 0.00 43.24 6.13
7702 8301 1.651987 AACGCATTAGATGTGACCGG 58.348 50.000 0.00 0.00 43.24 5.28
7703 8302 3.702330 TCTAACGCATTAGATGTGACCG 58.298 45.455 0.00 0.00 41.58 4.79
7712 8311 5.464965 AACAACCGAATCTAACGCATTAG 57.535 39.130 0.00 0.00 39.45 1.73
7713 8312 5.291614 GGTAACAACCGAATCTAACGCATTA 59.708 40.000 0.00 0.00 0.00 1.90
7714 8313 4.093850 GGTAACAACCGAATCTAACGCATT 59.906 41.667 0.00 0.00 0.00 3.56
7715 8314 3.619929 GGTAACAACCGAATCTAACGCAT 59.380 43.478 0.00 0.00 0.00 4.73
7716 8315 2.995258 GGTAACAACCGAATCTAACGCA 59.005 45.455 0.00 0.00 0.00 5.24
7717 8316 2.349580 GGGTAACAACCGAATCTAACGC 59.650 50.000 0.00 0.00 39.74 4.84
7718 8317 3.368843 GTGGGTAACAACCGAATCTAACG 59.631 47.826 0.00 0.00 39.74 3.18
7719 8318 3.686241 GGTGGGTAACAACCGAATCTAAC 59.314 47.826 0.00 0.00 39.74 2.34
7720 8319 3.617045 CGGTGGGTAACAACCGAATCTAA 60.617 47.826 23.02 0.00 42.50 2.10
7721 8320 2.094078 CGGTGGGTAACAACCGAATCTA 60.094 50.000 23.02 0.00 42.50 1.98
7722 8321 1.338389 CGGTGGGTAACAACCGAATCT 60.338 52.381 23.02 0.00 42.50 2.40
7723 8322 1.081094 CGGTGGGTAACAACCGAATC 58.919 55.000 23.02 0.00 42.50 2.52
7724 8323 0.397564 ACGGTGGGTAACAACCGAAT 59.602 50.000 33.34 9.10 42.50 3.34
7725 8324 0.179936 AACGGTGGGTAACAACCGAA 59.820 50.000 33.34 0.00 42.50 4.30
7726 8325 1.000731 CTAACGGTGGGTAACAACCGA 59.999 52.381 33.34 11.00 42.50 4.69
7727 8326 1.000731 TCTAACGGTGGGTAACAACCG 59.999 52.381 25.53 25.53 44.16 4.44
7728 8327 2.837532 TCTAACGGTGGGTAACAACC 57.162 50.000 0.00 0.00 39.74 3.77
7729 8328 3.929094 TGATCTAACGGTGGGTAACAAC 58.071 45.455 0.00 0.00 39.74 3.32
7730 8329 3.055675 CCTGATCTAACGGTGGGTAACAA 60.056 47.826 0.00 0.00 39.74 2.83
7731 8330 2.498481 CCTGATCTAACGGTGGGTAACA 59.502 50.000 0.00 0.00 39.74 2.41
7732 8331 2.740904 GCCTGATCTAACGGTGGGTAAC 60.741 54.545 0.00 0.00 0.00 2.50
7733 8332 1.483415 GCCTGATCTAACGGTGGGTAA 59.517 52.381 0.00 0.00 0.00 2.85
7734 8333 1.117150 GCCTGATCTAACGGTGGGTA 58.883 55.000 0.00 0.00 0.00 3.69
7735 8334 1.623542 GGCCTGATCTAACGGTGGGT 61.624 60.000 0.00 0.00 0.00 4.51
7736 8335 1.146263 GGCCTGATCTAACGGTGGG 59.854 63.158 0.00 0.00 0.00 4.61
7737 8336 0.541863 AAGGCCTGATCTAACGGTGG 59.458 55.000 5.69 0.00 0.00 4.61
7738 8337 2.403252 AAAGGCCTGATCTAACGGTG 57.597 50.000 5.69 0.00 0.00 4.94
7739 8338 2.711542 CAAAAGGCCTGATCTAACGGT 58.288 47.619 5.69 0.00 0.00 4.83
7740 8339 1.401905 GCAAAAGGCCTGATCTAACGG 59.598 52.381 5.69 0.00 36.11 4.44
7741 8340 2.359900 AGCAAAAGGCCTGATCTAACG 58.640 47.619 5.69 0.00 46.50 3.18
7742 8341 4.790765 AAAGCAAAAGGCCTGATCTAAC 57.209 40.909 5.69 0.00 46.50 2.34
7743 8342 5.806654 AAAAAGCAAAAGGCCTGATCTAA 57.193 34.783 5.69 0.00 46.50 2.10
7765 8364 5.524281 GGATGCCGTTTTGTTTAAGGAAAAA 59.476 36.000 0.00 0.00 0.00 1.94
7766 8365 5.051153 GGATGCCGTTTTGTTTAAGGAAAA 58.949 37.500 0.00 0.00 0.00 2.29
7767 8366 4.623002 GGATGCCGTTTTGTTTAAGGAAA 58.377 39.130 0.00 0.00 0.00 3.13
7768 8367 3.304794 CGGATGCCGTTTTGTTTAAGGAA 60.305 43.478 0.00 0.00 42.73 3.36
7769 8368 2.226912 CGGATGCCGTTTTGTTTAAGGA 59.773 45.455 0.00 0.00 42.73 3.36
7770 8369 2.591133 CGGATGCCGTTTTGTTTAAGG 58.409 47.619 0.00 0.00 42.73 2.69
7783 8382 2.229792 TGCTATTTTGGATCGGATGCC 58.770 47.619 7.05 3.65 0.00 4.40
7784 8383 4.088823 GATGCTATTTTGGATCGGATGC 57.911 45.455 2.14 2.14 0.00 3.91
7790 8389 3.058639 GTCCAGCGATGCTATTTTGGATC 60.059 47.826 0.00 0.00 36.40 3.36
7791 8390 2.880890 GTCCAGCGATGCTATTTTGGAT 59.119 45.455 0.00 0.00 36.40 3.41
7792 8391 2.288666 GTCCAGCGATGCTATTTTGGA 58.711 47.619 0.00 0.00 36.40 3.53
7793 8392 2.016318 TGTCCAGCGATGCTATTTTGG 58.984 47.619 0.00 0.00 36.40 3.28
7794 8393 3.304257 GGATGTCCAGCGATGCTATTTTG 60.304 47.826 0.00 0.00 36.40 2.44
7795 8394 2.880890 GGATGTCCAGCGATGCTATTTT 59.119 45.455 0.00 0.00 36.40 1.82
7796 8395 2.158769 TGGATGTCCAGCGATGCTATTT 60.159 45.455 0.00 0.00 42.01 1.40
7797 8396 1.417517 TGGATGTCCAGCGATGCTATT 59.582 47.619 0.00 0.00 42.01 1.73
7798 8397 1.051008 TGGATGTCCAGCGATGCTAT 58.949 50.000 0.00 0.00 42.01 2.97
7799 8398 2.515288 TGGATGTCCAGCGATGCTA 58.485 52.632 0.00 0.00 42.01 3.49
7800 8399 3.312799 TGGATGTCCAGCGATGCT 58.687 55.556 0.00 0.00 42.01 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.