Multiple sequence alignment - TraesCS5A01G511100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G511100 chr5A 100.000 3686 0 0 1 3686 674575054 674578739 0.000000e+00 6807.0
1 TraesCS5A01G511100 chr4D 93.939 2541 112 19 685 3201 494876695 494879217 0.000000e+00 3801.0
2 TraesCS5A01G511100 chr4D 76.799 1362 274 34 1318 2658 495979031 495980371 0.000000e+00 726.0
3 TraesCS5A01G511100 chr4D 94.828 174 5 2 3442 3615 494879217 494879386 6.070000e-68 268.0
4 TraesCS5A01G511100 chr4D 95.556 135 5 1 551 685 494876118 494876251 8.020000e-52 215.0
5 TraesCS5A01G511100 chr4D 100.000 86 0 0 3601 3686 494879404 494879489 3.810000e-35 159.0
6 TraesCS5A01G511100 chr4B 90.643 2597 132 59 663 3201 634980731 634983274 0.000000e+00 3347.0
7 TraesCS5A01G511100 chr4B 91.952 2311 122 24 551 2830 634461445 634459168 0.000000e+00 3179.0
8 TraesCS5A01G511100 chr4B 76.176 1360 286 30 1318 2658 635867901 635869241 0.000000e+00 682.0
9 TraesCS5A01G511100 chr4B 87.850 321 17 12 2888 3201 634459170 634458865 1.260000e-94 357.0
10 TraesCS5A01G511100 chr4B 89.928 278 27 1 276 553 634461990 634461714 1.260000e-94 357.0
11 TraesCS5A01G511100 chr4B 89.416 274 28 1 276 549 634980113 634980385 9.800000e-91 344.0
12 TraesCS5A01G511100 chr4B 82.199 191 16 8 3442 3622 634458865 634458683 8.250000e-32 148.0
13 TraesCS5A01G511100 chr4B 97.872 47 1 0 551 597 634980654 634980700 8.480000e-12 82.4
14 TraesCS5A01G511100 chr7D 84.815 1541 201 17 1163 2688 61235340 61236862 0.000000e+00 1519.0
15 TraesCS5A01G511100 chr7D 85.944 249 25 7 3198 3442 369400480 369400722 1.310000e-64 257.0
16 TraesCS5A01G511100 chr7A 84.197 1544 205 21 1163 2688 65163544 65165066 0.000000e+00 1463.0
17 TraesCS5A01G511100 chr7A 86.454 251 21 8 3199 3442 83127964 83128208 2.820000e-66 263.0
18 TraesCS5A01G511100 chr2A 83.661 1524 219 19 1175 2691 1776746 1778246 0.000000e+00 1408.0
19 TraesCS5A01G511100 chr2A 83.432 1527 217 26 1175 2691 1785261 1783761 0.000000e+00 1386.0
20 TraesCS5A01G511100 chr2A 82.544 1541 230 21 1163 2690 2731853 2730339 0.000000e+00 1319.0
21 TraesCS5A01G511100 chr2A 87.149 249 18 9 3201 3442 688426157 688426398 1.690000e-68 270.0
22 TraesCS5A01G511100 chr2B 83.568 925 134 15 1190 2108 305565 304653 0.000000e+00 850.0
23 TraesCS5A01G511100 chr2B 84.283 579 87 3 2116 2691 304402 303825 2.490000e-156 562.0
24 TraesCS5A01G511100 chr2B 85.117 383 57 0 2187 2569 7847669 7847287 3.450000e-105 392.0
25 TraesCS5A01G511100 chr2B 86.000 250 22 8 3200 3442 252543731 252543488 4.720000e-64 255.0
26 TraesCS5A01G511100 chr2B 85.714 252 20 12 3201 3443 460706705 460706461 6.110000e-63 252.0
27 TraesCS5A01G511100 chr2B 85.714 84 11 1 311 393 442084828 442084911 1.820000e-13 87.9
28 TraesCS5A01G511100 chr2B 88.679 53 4 2 322 373 92997213 92997162 3.070000e-06 63.9
29 TraesCS5A01G511100 chr3D 87.302 252 19 9 3198 3442 279734158 279734403 3.630000e-70 276.0
30 TraesCS5A01G511100 chr3D 88.235 238 17 7 3212 3442 477341793 477342026 1.300000e-69 274.0
31 TraesCS5A01G511100 chr3A 86.166 253 21 8 3199 3444 513393716 513393471 1.020000e-65 261.0
32 TraesCS5A01G511100 chr2D 86.235 247 20 8 3203 3442 490824840 490824601 4.720000e-64 255.0
33 TraesCS5A01G511100 chr1D 85.950 121 15 2 276 394 366005378 366005498 1.070000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G511100 chr5A 674575054 674578739 3685 False 6807.00 6807 100.000000 1 3686 1 chr5A.!!$F1 3685
1 TraesCS5A01G511100 chr4D 494876118 494879489 3371 False 1110.75 3801 96.080750 551 3686 4 chr4D.!!$F2 3135
2 TraesCS5A01G511100 chr4D 495979031 495980371 1340 False 726.00 726 76.799000 1318 2658 1 chr4D.!!$F1 1340
3 TraesCS5A01G511100 chr4B 634980113 634983274 3161 False 1257.80 3347 92.643667 276 3201 3 chr4B.!!$F2 2925
4 TraesCS5A01G511100 chr4B 634458683 634461990 3307 True 1010.25 3179 87.982250 276 3622 4 chr4B.!!$R1 3346
5 TraesCS5A01G511100 chr4B 635867901 635869241 1340 False 682.00 682 76.176000 1318 2658 1 chr4B.!!$F1 1340
6 TraesCS5A01G511100 chr7D 61235340 61236862 1522 False 1519.00 1519 84.815000 1163 2688 1 chr7D.!!$F1 1525
7 TraesCS5A01G511100 chr7A 65163544 65165066 1522 False 1463.00 1463 84.197000 1163 2688 1 chr7A.!!$F1 1525
8 TraesCS5A01G511100 chr2A 1776746 1778246 1500 False 1408.00 1408 83.661000 1175 2691 1 chr2A.!!$F1 1516
9 TraesCS5A01G511100 chr2A 1783761 1785261 1500 True 1386.00 1386 83.432000 1175 2691 1 chr2A.!!$R1 1516
10 TraesCS5A01G511100 chr2A 2730339 2731853 1514 True 1319.00 1319 82.544000 1163 2690 1 chr2A.!!$R2 1527
11 TraesCS5A01G511100 chr2B 303825 305565 1740 True 706.00 850 83.925500 1190 2691 2 chr2B.!!$R5 1501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
254 255 0.035739 TAAGACGGCCCAAACACCTC 59.964 55.0 0.0 0.0 0.0 3.85 F
260 261 0.110486 GGCCCAAACACCTCAGAGAA 59.890 55.0 0.0 0.0 0.0 2.87 F
778 1495 0.249155 GCGTCAATTCATGCCCCATG 60.249 55.0 0.0 0.0 42.6 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2125 3169 0.033601 AGGATCCTCTGCTCGACACT 60.034 55.0 9.02 0.00 0.00 3.55 R
2127 3171 1.039785 CCAGGATCCTCTGCTCGACA 61.040 60.0 12.69 0.00 33.64 4.35 R
2757 3818 0.442310 TGTACGTACGTGTCCGCTAC 59.558 55.0 30.25 18.33 37.70 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.510428 CATGACAAAAATTATGGAACGGAAG 57.490 36.000 0.00 0.00 0.00 3.46
25 26 6.019779 TGACAAAAATTATGGAACGGAAGG 57.980 37.500 0.00 0.00 0.00 3.46
26 27 5.770663 TGACAAAAATTATGGAACGGAAGGA 59.229 36.000 0.00 0.00 0.00 3.36
27 28 6.072175 TGACAAAAATTATGGAACGGAAGGAG 60.072 38.462 0.00 0.00 0.00 3.69
28 29 5.773176 ACAAAAATTATGGAACGGAAGGAGT 59.227 36.000 0.00 0.00 0.00 3.85
29 30 6.943718 ACAAAAATTATGGAACGGAAGGAGTA 59.056 34.615 0.00 0.00 0.00 2.59
30 31 7.614192 ACAAAAATTATGGAACGGAAGGAGTAT 59.386 33.333 0.00 0.00 0.00 2.12
31 32 8.466798 CAAAAATTATGGAACGGAAGGAGTATT 58.533 33.333 0.00 0.00 0.00 1.89
32 33 8.589701 AAAATTATGGAACGGAAGGAGTATTT 57.410 30.769 0.00 0.00 0.00 1.40
33 34 7.568199 AATTATGGAACGGAAGGAGTATTTG 57.432 36.000 0.00 0.00 0.00 2.32
34 35 4.569719 ATGGAACGGAAGGAGTATTTGT 57.430 40.909 0.00 0.00 0.00 2.83
35 36 3.670625 TGGAACGGAAGGAGTATTTGTG 58.329 45.455 0.00 0.00 0.00 3.33
36 37 3.007635 GGAACGGAAGGAGTATTTGTGG 58.992 50.000 0.00 0.00 0.00 4.17
37 38 2.781681 ACGGAAGGAGTATTTGTGGG 57.218 50.000 0.00 0.00 0.00 4.61
38 39 1.339727 ACGGAAGGAGTATTTGTGGGC 60.340 52.381 0.00 0.00 0.00 5.36
39 40 1.339631 CGGAAGGAGTATTTGTGGGCA 60.340 52.381 0.00 0.00 0.00 5.36
40 41 2.683742 CGGAAGGAGTATTTGTGGGCAT 60.684 50.000 0.00 0.00 0.00 4.40
41 42 3.433031 CGGAAGGAGTATTTGTGGGCATA 60.433 47.826 0.00 0.00 0.00 3.14
42 43 4.729868 GGAAGGAGTATTTGTGGGCATAT 58.270 43.478 0.00 0.00 0.00 1.78
43 44 5.512404 CGGAAGGAGTATTTGTGGGCATATA 60.512 44.000 0.00 0.00 0.00 0.86
44 45 6.485171 GGAAGGAGTATTTGTGGGCATATAT 58.515 40.000 0.00 0.00 0.00 0.86
45 46 6.948309 GGAAGGAGTATTTGTGGGCATATATT 59.052 38.462 0.00 0.00 0.00 1.28
46 47 7.451566 GGAAGGAGTATTTGTGGGCATATATTT 59.548 37.037 0.00 0.00 0.00 1.40
47 48 9.515226 GAAGGAGTATTTGTGGGCATATATTTA 57.485 33.333 0.00 0.00 0.00 1.40
48 49 8.863872 AGGAGTATTTGTGGGCATATATTTAC 57.136 34.615 0.00 0.00 0.00 2.01
49 50 8.444783 AGGAGTATTTGTGGGCATATATTTACA 58.555 33.333 0.00 0.00 0.00 2.41
50 51 8.512138 GGAGTATTTGTGGGCATATATTTACAC 58.488 37.037 0.00 0.00 0.00 2.90
51 52 9.284968 GAGTATTTGTGGGCATATATTTACACT 57.715 33.333 10.19 0.00 0.00 3.55
52 53 9.284968 AGTATTTGTGGGCATATATTTACACTC 57.715 33.333 10.19 0.00 0.00 3.51
53 54 9.062524 GTATTTGTGGGCATATATTTACACTCA 57.937 33.333 10.19 0.00 0.00 3.41
54 55 6.935741 TTGTGGGCATATATTTACACTCAC 57.064 37.500 10.19 0.00 0.00 3.51
55 56 5.373222 TGTGGGCATATATTTACACTCACC 58.627 41.667 10.19 0.00 0.00 4.02
56 57 5.131977 TGTGGGCATATATTTACACTCACCT 59.868 40.000 10.19 0.00 0.00 4.00
57 58 6.327887 TGTGGGCATATATTTACACTCACCTA 59.672 38.462 10.19 0.00 0.00 3.08
58 59 6.874134 GTGGGCATATATTTACACTCACCTAG 59.126 42.308 0.00 0.00 0.00 3.02
59 60 5.875359 GGGCATATATTTACACTCACCTAGC 59.125 44.000 0.00 0.00 0.00 3.42
60 61 6.464222 GGCATATATTTACACTCACCTAGCA 58.536 40.000 0.00 0.00 0.00 3.49
61 62 7.106239 GGCATATATTTACACTCACCTAGCAT 58.894 38.462 0.00 0.00 0.00 3.79
62 63 7.607991 GGCATATATTTACACTCACCTAGCATT 59.392 37.037 0.00 0.00 0.00 3.56
63 64 8.660373 GCATATATTTACACTCACCTAGCATTC 58.340 37.037 0.00 0.00 0.00 2.67
64 65 9.155975 CATATATTTACACTCACCTAGCATTCC 57.844 37.037 0.00 0.00 0.00 3.01
65 66 4.901197 TTTACACTCACCTAGCATTCCA 57.099 40.909 0.00 0.00 0.00 3.53
66 67 4.901197 TTACACTCACCTAGCATTCCAA 57.099 40.909 0.00 0.00 0.00 3.53
67 68 3.788227 ACACTCACCTAGCATTCCAAA 57.212 42.857 0.00 0.00 0.00 3.28
68 69 4.098914 ACACTCACCTAGCATTCCAAAA 57.901 40.909 0.00 0.00 0.00 2.44
69 70 4.469657 ACACTCACCTAGCATTCCAAAAA 58.530 39.130 0.00 0.00 0.00 1.94
70 71 5.079643 ACACTCACCTAGCATTCCAAAAAT 58.920 37.500 0.00 0.00 0.00 1.82
71 72 6.245408 ACACTCACCTAGCATTCCAAAAATA 58.755 36.000 0.00 0.00 0.00 1.40
72 73 6.151144 ACACTCACCTAGCATTCCAAAAATAC 59.849 38.462 0.00 0.00 0.00 1.89
73 74 5.652452 ACTCACCTAGCATTCCAAAAATACC 59.348 40.000 0.00 0.00 0.00 2.73
74 75 4.953579 TCACCTAGCATTCCAAAAATACCC 59.046 41.667 0.00 0.00 0.00 3.69
75 76 4.709397 CACCTAGCATTCCAAAAATACCCA 59.291 41.667 0.00 0.00 0.00 4.51
76 77 4.709886 ACCTAGCATTCCAAAAATACCCAC 59.290 41.667 0.00 0.00 0.00 4.61
77 78 4.709397 CCTAGCATTCCAAAAATACCCACA 59.291 41.667 0.00 0.00 0.00 4.17
78 79 5.186797 CCTAGCATTCCAAAAATACCCACAA 59.813 40.000 0.00 0.00 0.00 3.33
79 80 5.559148 AGCATTCCAAAAATACCCACAAA 57.441 34.783 0.00 0.00 0.00 2.83
80 81 5.934781 AGCATTCCAAAAATACCCACAAAA 58.065 33.333 0.00 0.00 0.00 2.44
81 82 6.541907 AGCATTCCAAAAATACCCACAAAAT 58.458 32.000 0.00 0.00 0.00 1.82
82 83 7.684529 AGCATTCCAAAAATACCCACAAAATA 58.315 30.769 0.00 0.00 0.00 1.40
83 84 8.160106 AGCATTCCAAAAATACCCACAAAATAA 58.840 29.630 0.00 0.00 0.00 1.40
84 85 8.787852 GCATTCCAAAAATACCCACAAAATAAA 58.212 29.630 0.00 0.00 0.00 1.40
159 160 9.725019 AGAAAAATAAATAAAGCAAGAAAGGGG 57.275 29.630 0.00 0.00 0.00 4.79
160 161 9.719355 GAAAAATAAATAAAGCAAGAAAGGGGA 57.281 29.630 0.00 0.00 0.00 4.81
163 164 9.725019 AAATAAATAAAGCAAGAAAGGGGAAAG 57.275 29.630 0.00 0.00 0.00 2.62
164 165 5.745312 AATAAAGCAAGAAAGGGGAAAGG 57.255 39.130 0.00 0.00 0.00 3.11
165 166 2.775490 AAGCAAGAAAGGGGAAAGGT 57.225 45.000 0.00 0.00 0.00 3.50
166 167 2.001076 AGCAAGAAAGGGGAAAGGTG 57.999 50.000 0.00 0.00 0.00 4.00
167 168 0.969149 GCAAGAAAGGGGAAAGGTGG 59.031 55.000 0.00 0.00 0.00 4.61
168 169 1.632589 CAAGAAAGGGGAAAGGTGGG 58.367 55.000 0.00 0.00 0.00 4.61
169 170 1.133167 CAAGAAAGGGGAAAGGTGGGT 60.133 52.381 0.00 0.00 0.00 4.51
170 171 0.778083 AGAAAGGGGAAAGGTGGGTC 59.222 55.000 0.00 0.00 0.00 4.46
171 172 0.608308 GAAAGGGGAAAGGTGGGTCG 60.608 60.000 0.00 0.00 0.00 4.79
172 173 2.708593 AAAGGGGAAAGGTGGGTCGC 62.709 60.000 0.00 0.00 0.00 5.19
173 174 3.961414 GGGGAAAGGTGGGTCGCA 61.961 66.667 0.00 0.00 0.00 5.10
174 175 2.671963 GGGAAAGGTGGGTCGCAC 60.672 66.667 11.46 11.46 0.00 5.34
175 176 2.671963 GGAAAGGTGGGTCGCACC 60.672 66.667 27.37 27.37 42.81 5.01
180 181 3.315949 GGTGGGTCGCACCTGGTA 61.316 66.667 27.35 0.00 38.64 3.25
181 182 2.745037 GTGGGTCGCACCTGGTAA 59.255 61.111 8.82 0.00 38.64 2.85
182 183 1.298667 GTGGGTCGCACCTGGTAAT 59.701 57.895 8.82 0.00 38.64 1.89
183 184 1.024579 GTGGGTCGCACCTGGTAATG 61.025 60.000 8.82 0.00 38.64 1.90
184 185 1.451387 GGGTCGCACCTGGTAATGG 60.451 63.158 0.00 0.00 38.64 3.16
185 186 1.298667 GGTCGCACCTGGTAATGGT 59.701 57.895 0.00 0.00 38.53 3.55
186 187 0.743345 GGTCGCACCTGGTAATGGTC 60.743 60.000 0.00 0.00 35.28 4.02
187 188 0.743345 GTCGCACCTGGTAATGGTCC 60.743 60.000 0.00 0.00 35.28 4.46
188 189 0.907704 TCGCACCTGGTAATGGTCCT 60.908 55.000 0.00 0.00 35.28 3.85
189 190 0.462047 CGCACCTGGTAATGGTCCTC 60.462 60.000 0.00 0.00 35.28 3.71
190 191 0.618458 GCACCTGGTAATGGTCCTCA 59.382 55.000 0.00 0.00 35.28 3.86
191 192 1.407437 GCACCTGGTAATGGTCCTCAG 60.407 57.143 0.00 0.00 35.28 3.35
192 193 0.912486 ACCTGGTAATGGTCCTCAGC 59.088 55.000 0.00 0.00 31.03 4.26
193 194 0.181350 CCTGGTAATGGTCCTCAGCC 59.819 60.000 0.00 0.00 0.00 4.85
194 195 0.181350 CTGGTAATGGTCCTCAGCCC 59.819 60.000 0.00 0.00 0.00 5.19
195 196 0.548926 TGGTAATGGTCCTCAGCCCA 60.549 55.000 0.00 0.00 34.66 5.36
196 197 0.107165 GGTAATGGTCCTCAGCCCAC 60.107 60.000 0.00 0.00 32.49 4.61
197 198 0.912486 GTAATGGTCCTCAGCCCACT 59.088 55.000 0.00 0.00 32.49 4.00
198 199 2.116238 GTAATGGTCCTCAGCCCACTA 58.884 52.381 0.00 0.00 32.49 2.74
199 200 1.668826 AATGGTCCTCAGCCCACTAA 58.331 50.000 0.00 0.00 32.49 2.24
200 201 1.207791 ATGGTCCTCAGCCCACTAAG 58.792 55.000 0.00 0.00 32.49 2.18
201 202 0.909610 TGGTCCTCAGCCCACTAAGG 60.910 60.000 0.00 0.00 37.03 2.69
202 203 0.617820 GGTCCTCAGCCCACTAAGGA 60.618 60.000 0.00 0.00 41.22 3.36
203 204 1.276622 GTCCTCAGCCCACTAAGGAA 58.723 55.000 0.00 0.00 39.55 3.36
204 205 1.840635 GTCCTCAGCCCACTAAGGAAT 59.159 52.381 0.00 0.00 39.55 3.01
205 206 2.239907 GTCCTCAGCCCACTAAGGAATT 59.760 50.000 0.00 0.00 39.55 2.17
206 207 3.454812 GTCCTCAGCCCACTAAGGAATTA 59.545 47.826 0.00 0.00 39.55 1.40
207 208 4.080526 GTCCTCAGCCCACTAAGGAATTAA 60.081 45.833 0.00 0.00 39.55 1.40
208 209 4.080526 TCCTCAGCCCACTAAGGAATTAAC 60.081 45.833 0.00 0.00 41.22 2.01
209 210 4.200092 CTCAGCCCACTAAGGAATTAACC 58.800 47.826 0.00 0.00 41.22 2.85
210 211 3.589735 TCAGCCCACTAAGGAATTAACCA 59.410 43.478 0.00 0.00 41.22 3.67
211 212 4.043561 TCAGCCCACTAAGGAATTAACCAA 59.956 41.667 0.00 0.00 41.22 3.67
212 213 4.157840 CAGCCCACTAAGGAATTAACCAAC 59.842 45.833 0.00 0.00 41.22 3.77
213 214 3.446161 GCCCACTAAGGAATTAACCAACC 59.554 47.826 0.00 0.00 41.22 3.77
214 215 4.021229 CCCACTAAGGAATTAACCAACCC 58.979 47.826 0.00 0.00 41.22 4.11
215 216 4.509482 CCCACTAAGGAATTAACCAACCCA 60.509 45.833 0.00 0.00 41.22 4.51
216 217 5.081032 CCACTAAGGAATTAACCAACCCAA 58.919 41.667 0.00 0.00 41.22 4.12
217 218 5.540719 CCACTAAGGAATTAACCAACCCAAA 59.459 40.000 0.00 0.00 41.22 3.28
218 219 6.212589 CCACTAAGGAATTAACCAACCCAAAT 59.787 38.462 0.00 0.00 41.22 2.32
219 220 7.397761 CCACTAAGGAATTAACCAACCCAAATA 59.602 37.037 0.00 0.00 41.22 1.40
220 221 8.977412 CACTAAGGAATTAACCAACCCAAATAT 58.023 33.333 0.00 0.00 0.00 1.28
221 222 8.977412 ACTAAGGAATTAACCAACCCAAATATG 58.023 33.333 0.00 0.00 0.00 1.78
222 223 7.806680 AAGGAATTAACCAACCCAAATATGT 57.193 32.000 0.00 0.00 0.00 2.29
223 224 7.181569 AGGAATTAACCAACCCAAATATGTG 57.818 36.000 0.00 0.00 0.00 3.21
224 225 6.156083 AGGAATTAACCAACCCAAATATGTGG 59.844 38.462 4.74 4.74 38.51 4.17
225 226 6.070481 GGAATTAACCAACCCAAATATGTGGT 60.070 38.462 11.17 0.00 36.90 4.16
226 227 5.986501 TTAACCAACCCAAATATGTGGTC 57.013 39.130 11.17 0.00 36.90 4.02
227 228 3.534357 ACCAACCCAAATATGTGGTCA 57.466 42.857 11.17 0.00 36.90 4.02
228 229 4.059773 ACCAACCCAAATATGTGGTCAT 57.940 40.909 11.17 0.00 36.90 3.06
229 230 4.023291 ACCAACCCAAATATGTGGTCATC 58.977 43.478 11.17 0.00 36.90 2.92
230 231 3.384467 CCAACCCAAATATGTGGTCATCC 59.616 47.826 11.17 0.00 36.90 3.51
231 232 2.930950 ACCCAAATATGTGGTCATCCG 58.069 47.619 11.17 0.00 36.90 4.18
232 233 2.507886 ACCCAAATATGTGGTCATCCGA 59.492 45.455 11.17 0.00 36.90 4.55
233 234 3.138283 ACCCAAATATGTGGTCATCCGAT 59.862 43.478 11.17 0.00 36.90 4.18
234 235 4.144297 CCCAAATATGTGGTCATCCGATT 58.856 43.478 11.17 0.00 36.90 3.34
235 236 4.584325 CCCAAATATGTGGTCATCCGATTT 59.416 41.667 11.17 0.00 36.90 2.17
236 237 5.767665 CCCAAATATGTGGTCATCCGATTTA 59.232 40.000 11.17 0.00 36.90 1.40
237 238 6.264292 CCCAAATATGTGGTCATCCGATTTAA 59.736 38.462 11.17 0.00 36.90 1.52
238 239 7.362662 CCAAATATGTGGTCATCCGATTTAAG 58.637 38.462 3.43 0.00 35.70 1.85
239 240 7.228507 CCAAATATGTGGTCATCCGATTTAAGA 59.771 37.037 3.43 0.00 35.70 2.10
240 241 7.730364 AATATGTGGTCATCCGATTTAAGAC 57.270 36.000 0.00 0.00 35.70 3.01
241 242 3.517602 TGTGGTCATCCGATTTAAGACG 58.482 45.455 0.00 0.00 36.30 4.18
246 247 4.946038 CCGATTTAAGACGGCCCA 57.054 55.556 0.00 0.00 42.55 5.36
247 248 3.162448 CCGATTTAAGACGGCCCAA 57.838 52.632 0.00 0.00 42.55 4.12
248 249 1.455248 CCGATTTAAGACGGCCCAAA 58.545 50.000 0.00 0.00 42.55 3.28
249 250 1.131693 CCGATTTAAGACGGCCCAAAC 59.868 52.381 0.00 0.00 42.55 2.93
250 251 1.807742 CGATTTAAGACGGCCCAAACA 59.192 47.619 0.00 0.00 0.00 2.83
251 252 2.413634 CGATTTAAGACGGCCCAAACAC 60.414 50.000 0.00 0.00 0.00 3.32
252 253 1.320507 TTTAAGACGGCCCAAACACC 58.679 50.000 0.00 0.00 0.00 4.16
253 254 0.475044 TTAAGACGGCCCAAACACCT 59.525 50.000 0.00 0.00 0.00 4.00
254 255 0.035739 TAAGACGGCCCAAACACCTC 59.964 55.000 0.00 0.00 0.00 3.85
255 256 1.990160 AAGACGGCCCAAACACCTCA 61.990 55.000 0.00 0.00 0.00 3.86
256 257 1.966451 GACGGCCCAAACACCTCAG 60.966 63.158 0.00 0.00 0.00 3.35
257 258 2.391724 GACGGCCCAAACACCTCAGA 62.392 60.000 0.00 0.00 0.00 3.27
258 259 1.672356 CGGCCCAAACACCTCAGAG 60.672 63.158 0.00 0.00 0.00 3.35
259 260 1.761174 GGCCCAAACACCTCAGAGA 59.239 57.895 0.00 0.00 0.00 3.10
260 261 0.110486 GGCCCAAACACCTCAGAGAA 59.890 55.000 0.00 0.00 0.00 2.87
261 262 1.239347 GCCCAAACACCTCAGAGAAC 58.761 55.000 0.00 0.00 0.00 3.01
262 263 1.476833 GCCCAAACACCTCAGAGAACA 60.477 52.381 0.00 0.00 0.00 3.18
263 264 2.930950 CCCAAACACCTCAGAGAACAA 58.069 47.619 0.00 0.00 0.00 2.83
264 265 3.287222 CCCAAACACCTCAGAGAACAAA 58.713 45.455 0.00 0.00 0.00 2.83
265 266 3.891366 CCCAAACACCTCAGAGAACAAAT 59.109 43.478 0.00 0.00 0.00 2.32
266 267 4.342092 CCCAAACACCTCAGAGAACAAATT 59.658 41.667 0.00 0.00 0.00 1.82
267 268 5.507985 CCCAAACACCTCAGAGAACAAATTC 60.508 44.000 0.00 0.00 34.78 2.17
312 313 9.476202 AGAACAAATAAGGAAAAATAGCAACAC 57.524 29.630 0.00 0.00 0.00 3.32
344 345 2.797792 GCAAGATCAACGGCACACAAAA 60.798 45.455 0.00 0.00 0.00 2.44
346 347 4.050553 CAAGATCAACGGCACACAAAATT 58.949 39.130 0.00 0.00 0.00 1.82
357 358 3.430098 GCACACAAAATTGACTGACCCAA 60.430 43.478 0.00 0.00 0.00 4.12
362 363 7.656948 CACACAAAATTGACTGACCCAAAATAT 59.343 33.333 0.00 0.00 0.00 1.28
371 372 8.292444 TGACTGACCCAAAATATAATTTCAGG 57.708 34.615 0.00 2.56 0.00 3.86
378 379 7.682459 ACCCAAAATATAATTTCAGGGGACTTT 59.318 33.333 19.08 3.96 40.21 2.66
395 396 6.377146 GGGGACTTTCATGTAGCTAAATTGAA 59.623 38.462 0.00 2.64 0.00 2.69
444 445 3.139077 ACTCGGGTCAAGACAAATGTTC 58.861 45.455 2.29 0.00 0.00 3.18
451 452 6.184789 GGGTCAAGACAAATGTTCCCTATAA 58.815 40.000 2.29 0.00 33.59 0.98
507 508 0.653897 GACTCGTCGCTAATCGTCCG 60.654 60.000 0.00 0.00 39.67 4.79
680 953 2.432510 CCCCTACCATCTCAGTCTGAAC 59.567 54.545 3.67 0.00 0.00 3.18
716 1433 2.292016 CTCGCATCCATCGTAGTCTCTT 59.708 50.000 0.00 0.00 0.00 2.85
778 1495 0.249155 GCGTCAATTCATGCCCCATG 60.249 55.000 0.00 0.00 42.60 3.66
784 1501 0.564171 ATTCATGCCCCATGGATGGT 59.436 50.000 15.22 0.00 46.65 3.55
852 1569 7.480760 AATGGCATACCTTCTACAAAAACAT 57.519 32.000 0.00 0.00 36.63 2.71
872 1589 9.747898 AAAACATAGACCATACATTTCCACTTA 57.252 29.630 0.00 0.00 0.00 2.24
918 1661 5.809562 CCTCACAATTCTCACTCACAGATAC 59.190 44.000 0.00 0.00 0.00 2.24
933 1676 9.319060 ACTCACAGATACTGGATATGATATGTT 57.681 33.333 0.67 0.00 35.51 2.71
1020 1764 3.117926 TGATGACCCAATCACCATACTGG 60.118 47.826 0.00 0.00 41.24 4.00
1069 1813 8.950210 CAACCTATGAAACACATTTACTCATCT 58.050 33.333 0.00 0.00 40.07 2.90
1103 1855 2.039418 AGAGTGCGTCCATATAAGCCA 58.961 47.619 0.00 0.00 0.00 4.75
1104 1856 2.036475 AGAGTGCGTCCATATAAGCCAG 59.964 50.000 0.00 0.00 0.00 4.85
1105 1857 0.868406 GTGCGTCCATATAAGCCAGC 59.132 55.000 0.00 0.00 0.00 4.85
1106 1858 0.250295 TGCGTCCATATAAGCCAGCC 60.250 55.000 0.00 0.00 0.00 4.85
1119 1871 1.039233 GCCAGCCCATATGTTGCACT 61.039 55.000 14.67 0.00 0.00 4.40
1131 1883 2.829384 TTGCACTGGTGACCTCCCC 61.829 63.158 2.11 0.00 0.00 4.81
1132 1884 4.035102 GCACTGGTGACCTCCCCC 62.035 72.222 2.11 0.00 0.00 5.40
1142 1894 0.466124 GACCTCCCCCATCTTCTTCG 59.534 60.000 0.00 0.00 0.00 3.79
1155 1917 2.768527 TCTTCTTCGAGCCATGGATTCT 59.231 45.455 18.40 2.26 0.00 2.40
1159 1921 2.079170 TCGAGCCATGGATTCTCTCT 57.921 50.000 18.40 0.00 0.00 3.10
1160 1922 3.229697 TCGAGCCATGGATTCTCTCTA 57.770 47.619 18.40 0.89 0.00 2.43
1195 1960 0.737715 CCTCTCCGTCCTTTGCTTCG 60.738 60.000 0.00 0.00 0.00 3.79
1242 2007 4.022068 CAGTCCAAGAAAATAAGCAAGGCA 60.022 41.667 0.00 0.00 0.00 4.75
1278 2043 1.483415 CCAATCCTGGGCCATCTTTTG 59.517 52.381 6.72 9.03 39.30 2.44
1281 2046 1.145900 TCCTGGGCCATCTTTTGGGA 61.146 55.000 6.72 5.33 46.55 4.37
1931 2708 1.603455 CCATCACCAAACGCAGGGT 60.603 57.895 0.00 0.00 38.10 4.34
1938 2715 1.671054 CAAACGCAGGGTCGACCAT 60.671 57.895 34.40 27.09 43.89 3.55
1974 2757 3.735029 GGCGTCACCGACTCGTCT 61.735 66.667 0.00 0.00 39.71 4.18
2004 2787 1.796796 GTCCTTCATCTGCAACGGC 59.203 57.895 0.00 0.00 41.68 5.68
2125 3169 1.267121 CCTTCTCTCCAAGAACCCGA 58.733 55.000 0.00 0.00 39.12 5.14
2127 3171 1.896465 CTTCTCTCCAAGAACCCGAGT 59.104 52.381 0.00 0.00 39.12 4.18
2418 3477 1.649321 AGGACTGCATGGAGTTCAGA 58.351 50.000 25.75 0.00 0.00 3.27
2690 3751 1.227380 GCGTGCATGGCTAGCTAGT 60.227 57.895 21.62 0.00 0.00 2.57
2691 3752 1.493950 GCGTGCATGGCTAGCTAGTG 61.494 60.000 21.62 13.22 0.00 2.74
2692 3753 0.877649 CGTGCATGGCTAGCTAGTGG 60.878 60.000 21.62 10.02 0.00 4.00
2693 3754 0.179000 GTGCATGGCTAGCTAGTGGT 59.821 55.000 21.62 5.46 0.00 4.16
2694 3755 1.412710 GTGCATGGCTAGCTAGTGGTA 59.587 52.381 21.62 6.71 0.00 3.25
2931 3997 4.509970 GTGTAAGCTGTATGTGTGTGTTCA 59.490 41.667 0.00 0.00 0.00 3.18
3052 4126 9.209175 CTGCCTATATACATTTCTGGAAGTTAC 57.791 37.037 0.00 0.00 33.76 2.50
3129 4206 3.932822 TCATTTTGAACTAGCCGTAGCA 58.067 40.909 0.00 0.00 43.56 3.49
3160 4239 1.407989 GGGAGAGGCAGACTTGGATTG 60.408 57.143 0.00 0.00 0.00 2.67
3201 4280 3.126831 CAAACGGCCAGAGTCAGATATC 58.873 50.000 2.24 0.00 0.00 1.63
3202 4281 2.373335 ACGGCCAGAGTCAGATATCT 57.627 50.000 2.24 0.00 0.00 1.98
3203 4282 2.235016 ACGGCCAGAGTCAGATATCTC 58.765 52.381 2.24 0.00 0.00 2.75
3204 4283 2.158534 ACGGCCAGAGTCAGATATCTCT 60.159 50.000 2.24 0.00 41.04 3.10
3205 4284 3.073209 ACGGCCAGAGTCAGATATCTCTA 59.927 47.826 2.24 0.00 38.74 2.43
3206 4285 3.438781 CGGCCAGAGTCAGATATCTCTAC 59.561 52.174 2.24 4.50 38.74 2.59
3207 4286 4.662278 GGCCAGAGTCAGATATCTCTACT 58.338 47.826 14.42 14.42 38.74 2.57
3208 4287 4.700213 GGCCAGAGTCAGATATCTCTACTC 59.300 50.000 24.82 24.82 38.74 2.59
3209 4288 5.514834 GGCCAGAGTCAGATATCTCTACTCT 60.515 48.000 27.23 27.23 39.91 3.24
3210 4289 6.003950 GCCAGAGTCAGATATCTCTACTCTT 58.996 44.000 28.92 18.67 38.73 2.85
3211 4290 7.165485 GCCAGAGTCAGATATCTCTACTCTTA 58.835 42.308 28.92 1.03 38.73 2.10
3212 4291 7.829211 GCCAGAGTCAGATATCTCTACTCTTAT 59.171 40.741 28.92 16.02 38.73 1.73
3239 4318 5.695851 AAAAACAGAGTGGATGATGTGTC 57.304 39.130 0.00 0.00 0.00 3.67
3240 4319 4.630644 AAACAGAGTGGATGATGTGTCT 57.369 40.909 0.00 0.00 0.00 3.41
3241 4320 3.606595 ACAGAGTGGATGATGTGTCTG 57.393 47.619 0.00 0.00 37.91 3.51
3242 4321 2.277969 CAGAGTGGATGATGTGTCTGC 58.722 52.381 0.00 0.00 0.00 4.26
3243 4322 1.209019 AGAGTGGATGATGTGTCTGCC 59.791 52.381 0.00 0.00 0.00 4.85
3244 4323 0.986527 AGTGGATGATGTGTCTGCCA 59.013 50.000 0.00 0.00 0.00 4.92
3245 4324 1.562942 AGTGGATGATGTGTCTGCCAT 59.437 47.619 0.00 0.00 33.20 4.40
3246 4325 2.025605 AGTGGATGATGTGTCTGCCATT 60.026 45.455 0.00 0.00 33.20 3.16
3247 4326 2.357009 GTGGATGATGTGTCTGCCATTC 59.643 50.000 0.00 0.00 33.20 2.67
3248 4327 2.240414 TGGATGATGTGTCTGCCATTCT 59.760 45.455 0.00 0.00 0.00 2.40
3249 4328 2.617308 GGATGATGTGTCTGCCATTCTG 59.383 50.000 0.00 0.00 0.00 3.02
3250 4329 1.456296 TGATGTGTCTGCCATTCTGC 58.544 50.000 0.00 0.00 0.00 4.26
3251 4330 1.271488 TGATGTGTCTGCCATTCTGCA 60.271 47.619 0.00 0.00 39.37 4.41
3260 4339 3.475566 TGCCATTCTGCAGTATAGACC 57.524 47.619 14.67 0.00 36.04 3.85
3261 4340 2.224042 TGCCATTCTGCAGTATAGACCG 60.224 50.000 14.67 0.00 36.04 4.79
3262 4341 2.224066 GCCATTCTGCAGTATAGACCGT 60.224 50.000 14.67 0.00 0.00 4.83
3263 4342 3.643763 CCATTCTGCAGTATAGACCGTC 58.356 50.000 14.67 0.00 0.00 4.79
3264 4343 3.553096 CCATTCTGCAGTATAGACCGTCC 60.553 52.174 14.67 0.00 0.00 4.79
3265 4344 1.306148 TCTGCAGTATAGACCGTCCG 58.694 55.000 14.67 0.00 0.00 4.79
3266 4345 1.134310 TCTGCAGTATAGACCGTCCGA 60.134 52.381 14.67 0.00 0.00 4.55
3267 4346 1.880675 CTGCAGTATAGACCGTCCGAT 59.119 52.381 5.25 0.00 0.00 4.18
3268 4347 1.878088 TGCAGTATAGACCGTCCGATC 59.122 52.381 0.00 0.00 0.00 3.69
3269 4348 2.152830 GCAGTATAGACCGTCCGATCT 58.847 52.381 0.00 0.00 0.00 2.75
3270 4349 3.244318 TGCAGTATAGACCGTCCGATCTA 60.244 47.826 0.00 0.00 32.11 1.98
3271 4350 3.940221 GCAGTATAGACCGTCCGATCTAT 59.060 47.826 8.53 8.53 40.47 1.98
3272 4351 5.114780 GCAGTATAGACCGTCCGATCTATA 58.885 45.833 6.69 6.69 38.71 1.31
3273 4352 5.759273 GCAGTATAGACCGTCCGATCTATAT 59.241 44.000 12.62 2.18 40.68 0.86
3274 4353 6.260493 GCAGTATAGACCGTCCGATCTATATT 59.740 42.308 12.62 7.07 40.68 1.28
3275 4354 7.201714 GCAGTATAGACCGTCCGATCTATATTT 60.202 40.741 12.62 4.02 40.68 1.40
3276 4355 8.123575 CAGTATAGACCGTCCGATCTATATTTG 58.876 40.741 12.62 10.73 40.68 2.32
3277 4356 8.045507 AGTATAGACCGTCCGATCTATATTTGA 58.954 37.037 12.62 0.00 40.68 2.69
3278 4357 5.373981 AGACCGTCCGATCTATATTTGAC 57.626 43.478 0.00 0.00 0.00 3.18
3279 4358 4.083431 AGACCGTCCGATCTATATTTGACG 60.083 45.833 0.00 0.00 43.64 4.35
3281 4360 4.414999 CGTCCGATCTATATTTGACGGA 57.585 45.455 0.00 0.00 45.36 4.69
3286 4365 7.933215 TCCGATCTATATTTGACGGATAGAA 57.067 36.000 0.00 0.00 43.30 2.10
3287 4366 8.344446 TCCGATCTATATTTGACGGATAGAAA 57.656 34.615 0.00 0.00 43.30 2.52
3288 4367 8.459635 TCCGATCTATATTTGACGGATAGAAAG 58.540 37.037 0.00 0.00 43.30 2.62
3289 4368 7.221067 CCGATCTATATTTGACGGATAGAAAGC 59.779 40.741 0.00 0.00 42.40 3.51
3290 4369 7.755373 CGATCTATATTTGACGGATAGAAAGCA 59.245 37.037 0.00 0.00 36.15 3.91
3291 4370 9.424319 GATCTATATTTGACGGATAGAAAGCAA 57.576 33.333 0.00 0.00 36.15 3.91
3292 4371 9.778741 ATCTATATTTGACGGATAGAAAGCAAA 57.221 29.630 0.00 0.00 36.15 3.68
3293 4372 9.042008 TCTATATTTGACGGATAGAAAGCAAAC 57.958 33.333 0.00 0.00 30.92 2.93
3294 4373 7.865706 ATATTTGACGGATAGAAAGCAAACT 57.134 32.000 0.00 0.00 0.00 2.66
3295 4374 8.958119 ATATTTGACGGATAGAAAGCAAACTA 57.042 30.769 0.00 0.00 0.00 2.24
3296 4375 7.865706 ATTTGACGGATAGAAAGCAAACTAT 57.134 32.000 0.00 0.00 32.87 2.12
3297 4376 6.662414 TTGACGGATAGAAAGCAAACTATG 57.338 37.500 0.00 0.00 30.74 2.23
3298 4377 5.116180 TGACGGATAGAAAGCAAACTATGG 58.884 41.667 0.00 0.00 30.74 2.74
3299 4378 5.099042 ACGGATAGAAAGCAAACTATGGT 57.901 39.130 0.00 0.00 42.88 3.55
3300 4379 6.127281 TGACGGATAGAAAGCAAACTATGGTA 60.127 38.462 0.00 0.00 39.29 3.25
3301 4380 6.646267 ACGGATAGAAAGCAAACTATGGTAA 58.354 36.000 0.00 0.00 39.29 2.85
3302 4381 7.280356 ACGGATAGAAAGCAAACTATGGTAAT 58.720 34.615 0.00 0.00 39.29 1.89
3303 4382 7.773690 ACGGATAGAAAGCAAACTATGGTAATT 59.226 33.333 0.00 0.00 39.29 1.40
3304 4383 8.621286 CGGATAGAAAGCAAACTATGGTAATTT 58.379 33.333 0.00 0.00 39.29 1.82
3329 4408 3.276281 AAAAATACCCGCACCCCTC 57.724 52.632 0.00 0.00 0.00 4.30
3330 4409 0.702316 AAAAATACCCGCACCCCTCT 59.298 50.000 0.00 0.00 0.00 3.69
3331 4410 0.255033 AAAATACCCGCACCCCTCTC 59.745 55.000 0.00 0.00 0.00 3.20
3332 4411 0.912487 AAATACCCGCACCCCTCTCA 60.912 55.000 0.00 0.00 0.00 3.27
3333 4412 1.623542 AATACCCGCACCCCTCTCAC 61.624 60.000 0.00 0.00 0.00 3.51
3334 4413 2.815684 ATACCCGCACCCCTCTCACA 62.816 60.000 0.00 0.00 0.00 3.58
3335 4414 2.815684 TACCCGCACCCCTCTCACAT 62.816 60.000 0.00 0.00 0.00 3.21
3336 4415 2.671070 CCGCACCCCTCTCACATT 59.329 61.111 0.00 0.00 0.00 2.71
3337 4416 1.002134 CCGCACCCCTCTCACATTT 60.002 57.895 0.00 0.00 0.00 2.32
3338 4417 1.308069 CCGCACCCCTCTCACATTTG 61.308 60.000 0.00 0.00 0.00 2.32
3339 4418 0.606401 CGCACCCCTCTCACATTTGT 60.606 55.000 0.00 0.00 0.00 2.83
3340 4419 1.338674 CGCACCCCTCTCACATTTGTA 60.339 52.381 0.00 0.00 0.00 2.41
3341 4420 2.790433 GCACCCCTCTCACATTTGTAA 58.210 47.619 0.00 0.00 0.00 2.41
3342 4421 2.749621 GCACCCCTCTCACATTTGTAAG 59.250 50.000 0.00 0.00 0.00 2.34
3343 4422 3.810743 GCACCCCTCTCACATTTGTAAGT 60.811 47.826 0.00 0.00 0.00 2.24
3344 4423 4.564821 GCACCCCTCTCACATTTGTAAGTA 60.565 45.833 0.00 0.00 0.00 2.24
3345 4424 5.556915 CACCCCTCTCACATTTGTAAGTAA 58.443 41.667 0.00 0.00 0.00 2.24
3346 4425 5.643777 CACCCCTCTCACATTTGTAAGTAAG 59.356 44.000 0.00 0.00 0.00 2.34
3347 4426 5.186198 CCCCTCTCACATTTGTAAGTAAGG 58.814 45.833 0.00 0.00 0.00 2.69
3348 4427 4.636206 CCCTCTCACATTTGTAAGTAAGGC 59.364 45.833 0.00 0.00 0.00 4.35
3349 4428 4.636206 CCTCTCACATTTGTAAGTAAGGCC 59.364 45.833 0.00 0.00 0.00 5.19
3350 4429 5.491982 CTCTCACATTTGTAAGTAAGGCCT 58.508 41.667 0.00 0.00 0.00 5.19
3351 4430 5.876357 TCTCACATTTGTAAGTAAGGCCTT 58.124 37.500 24.18 24.18 0.00 4.35
3352 4431 5.938125 TCTCACATTTGTAAGTAAGGCCTTC 59.062 40.000 24.49 13.89 0.00 3.46
3353 4432 5.007682 TCACATTTGTAAGTAAGGCCTTCC 58.992 41.667 24.49 11.54 0.00 3.46
3354 4433 4.157840 CACATTTGTAAGTAAGGCCTTCCC 59.842 45.833 24.49 14.28 0.00 3.97
3356 4435 3.994931 TTGTAAGTAAGGCCTTCCCTC 57.005 47.619 24.49 11.27 45.62 4.30
3357 4436 1.829222 TGTAAGTAAGGCCTTCCCTCG 59.171 52.381 24.49 0.00 45.62 4.63
3358 4437 1.829849 GTAAGTAAGGCCTTCCCTCGT 59.170 52.381 24.49 11.72 45.62 4.18
3359 4438 1.359168 AAGTAAGGCCTTCCCTCGTT 58.641 50.000 24.49 4.71 45.62 3.85
3360 4439 0.903236 AGTAAGGCCTTCCCTCGTTC 59.097 55.000 24.49 3.75 45.62 3.95
3361 4440 0.611714 GTAAGGCCTTCCCTCGTTCA 59.388 55.000 24.49 0.00 45.62 3.18
3362 4441 1.209747 GTAAGGCCTTCCCTCGTTCAT 59.790 52.381 24.49 0.00 45.62 2.57
3363 4442 0.253327 AAGGCCTTCCCTCGTTCATC 59.747 55.000 13.78 0.00 45.62 2.92
3364 4443 0.618968 AGGCCTTCCCTCGTTCATCT 60.619 55.000 0.00 0.00 41.21 2.90
3365 4444 0.253327 GGCCTTCCCTCGTTCATCTT 59.747 55.000 0.00 0.00 0.00 2.40
3366 4445 1.340114 GGCCTTCCCTCGTTCATCTTT 60.340 52.381 0.00 0.00 0.00 2.52
3367 4446 1.740025 GCCTTCCCTCGTTCATCTTTG 59.260 52.381 0.00 0.00 0.00 2.77
3368 4447 2.876079 GCCTTCCCTCGTTCATCTTTGT 60.876 50.000 0.00 0.00 0.00 2.83
3369 4448 3.003480 CCTTCCCTCGTTCATCTTTGTC 58.997 50.000 0.00 0.00 0.00 3.18
3370 4449 3.307059 CCTTCCCTCGTTCATCTTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3371 4450 3.594603 TCCCTCGTTCATCTTTGTCTC 57.405 47.619 0.00 0.00 0.00 3.36
3372 4451 2.233922 TCCCTCGTTCATCTTTGTCTCC 59.766 50.000 0.00 0.00 0.00 3.71
3373 4452 2.622436 CCTCGTTCATCTTTGTCTCCC 58.378 52.381 0.00 0.00 0.00 4.30
3374 4453 2.028112 CCTCGTTCATCTTTGTCTCCCA 60.028 50.000 0.00 0.00 0.00 4.37
3375 4454 2.996621 CTCGTTCATCTTTGTCTCCCAC 59.003 50.000 0.00 0.00 0.00 4.61
3376 4455 2.367241 TCGTTCATCTTTGTCTCCCACA 59.633 45.455 0.00 0.00 0.00 4.17
3377 4456 3.138304 CGTTCATCTTTGTCTCCCACAA 58.862 45.455 0.00 0.00 43.68 3.33
3388 4467 6.783708 TTGTCTCCCACAAAATAAACAACT 57.216 33.333 0.00 0.00 42.35 3.16
3389 4468 6.385649 TGTCTCCCACAAAATAAACAACTC 57.614 37.500 0.00 0.00 29.30 3.01
3390 4469 5.888724 TGTCTCCCACAAAATAAACAACTCA 59.111 36.000 0.00 0.00 29.30 3.41
3391 4470 6.549364 TGTCTCCCACAAAATAAACAACTCAT 59.451 34.615 0.00 0.00 29.30 2.90
3392 4471 7.721842 TGTCTCCCACAAAATAAACAACTCATA 59.278 33.333 0.00 0.00 29.30 2.15
3393 4472 8.739972 GTCTCCCACAAAATAAACAACTCATAT 58.260 33.333 0.00 0.00 0.00 1.78
3394 4473 9.967451 TCTCCCACAAAATAAACAACTCATATA 57.033 29.630 0.00 0.00 0.00 0.86
3418 4497 9.862371 ATAAATGCATTTTAATGTTCCGTACAA 57.138 25.926 28.45 6.31 38.65 2.41
3419 4498 7.575332 AATGCATTTTAATGTTCCGTACAAC 57.425 32.000 5.99 0.00 40.89 3.32
3420 4499 6.073327 TGCATTTTAATGTTCCGTACAACA 57.927 33.333 1.65 1.65 40.89 3.33
3421 4500 6.504398 TGCATTTTAATGTTCCGTACAACAA 58.496 32.000 3.18 0.00 39.69 2.83
3422 4501 6.418226 TGCATTTTAATGTTCCGTACAACAAC 59.582 34.615 3.18 0.00 39.69 3.32
3423 4502 6.398101 GCATTTTAATGTTCCGTACAACAACG 60.398 38.462 3.18 0.00 39.69 4.10
3424 4503 2.673976 AATGTTCCGTACAACAACGC 57.326 45.000 3.18 0.00 39.69 4.84
3425 4504 1.584175 ATGTTCCGTACAACAACGCA 58.416 45.000 3.18 0.00 39.69 5.24
3426 4505 1.584175 TGTTCCGTACAACAACGCAT 58.416 45.000 0.00 0.00 41.51 4.73
3427 4506 1.261885 TGTTCCGTACAACAACGCATG 59.738 47.619 0.00 0.00 41.51 4.06
3428 4507 0.869068 TTCCGTACAACAACGCATGG 59.131 50.000 0.00 0.00 41.51 3.66
3429 4508 1.154301 CCGTACAACAACGCATGGC 60.154 57.895 0.00 0.00 41.51 4.40
3430 4509 1.154301 CGTACAACAACGCATGGCC 60.154 57.895 0.00 0.00 35.87 5.36
3431 4510 1.211709 GTACAACAACGCATGGCCC 59.788 57.895 0.00 0.00 0.00 5.80
3432 4511 1.074072 TACAACAACGCATGGCCCT 59.926 52.632 0.00 0.00 0.00 5.19
3433 4512 0.958382 TACAACAACGCATGGCCCTC 60.958 55.000 0.00 0.00 0.00 4.30
3434 4513 1.973281 CAACAACGCATGGCCCTCT 60.973 57.895 0.00 0.00 0.00 3.69
3435 4514 1.228552 AACAACGCATGGCCCTCTT 60.229 52.632 0.00 0.00 0.00 2.85
3436 4515 1.526575 AACAACGCATGGCCCTCTTG 61.527 55.000 0.00 0.00 0.00 3.02
3437 4516 3.064324 AACGCATGGCCCTCTTGC 61.064 61.111 0.00 3.43 41.47 4.01
3438 4517 3.574074 AACGCATGGCCCTCTTGCT 62.574 57.895 0.00 0.00 42.35 3.91
3439 4518 2.190313 CGCATGGCCCTCTTGCTA 59.810 61.111 0.00 0.00 42.35 3.49
3440 4519 1.890979 CGCATGGCCCTCTTGCTAG 60.891 63.158 0.00 0.00 42.35 3.42
3441 4520 1.225704 GCATGGCCCTCTTGCTAGT 59.774 57.895 0.00 0.00 41.60 2.57
3457 4536 8.712228 TCTTGCTAGTTCAGATAGATATCCAA 57.288 34.615 0.00 0.00 33.17 3.53
3458 4537 9.147732 TCTTGCTAGTTCAGATAGATATCCAAA 57.852 33.333 0.00 0.00 33.17 3.28
3501 4580 2.342279 TGCCACGCACAGGAGTAC 59.658 61.111 0.00 0.00 31.71 2.73
3502 4581 2.342279 GCCACGCACAGGAGTACA 59.658 61.111 0.00 0.00 0.00 2.90
3503 4582 1.738099 GCCACGCACAGGAGTACAG 60.738 63.158 0.00 0.00 0.00 2.74
3507 4586 2.990479 GCACAGGAGTACAGGGGG 59.010 66.667 0.00 0.00 0.00 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.531240 CCTTCCGTTCCATAATTTTTGTCATG 59.469 38.462 0.00 0.00 0.00 3.07
2 3 5.770663 TCCTTCCGTTCCATAATTTTTGTCA 59.229 36.000 0.00 0.00 0.00 3.58
3 4 6.072119 ACTCCTTCCGTTCCATAATTTTTGTC 60.072 38.462 0.00 0.00 0.00 3.18
6 7 8.589701 AATACTCCTTCCGTTCCATAATTTTT 57.410 30.769 0.00 0.00 0.00 1.94
7 8 8.466798 CAAATACTCCTTCCGTTCCATAATTTT 58.533 33.333 0.00 0.00 0.00 1.82
8 9 7.614192 ACAAATACTCCTTCCGTTCCATAATTT 59.386 33.333 0.00 0.00 0.00 1.82
9 10 7.067008 CACAAATACTCCTTCCGTTCCATAATT 59.933 37.037 0.00 0.00 0.00 1.40
10 11 6.542370 CACAAATACTCCTTCCGTTCCATAAT 59.458 38.462 0.00 0.00 0.00 1.28
11 12 5.878116 CACAAATACTCCTTCCGTTCCATAA 59.122 40.000 0.00 0.00 0.00 1.90
12 13 5.424757 CACAAATACTCCTTCCGTTCCATA 58.575 41.667 0.00 0.00 0.00 2.74
13 14 4.261801 CACAAATACTCCTTCCGTTCCAT 58.738 43.478 0.00 0.00 0.00 3.41
14 15 3.558321 CCACAAATACTCCTTCCGTTCCA 60.558 47.826 0.00 0.00 0.00 3.53
15 16 3.007635 CCACAAATACTCCTTCCGTTCC 58.992 50.000 0.00 0.00 0.00 3.62
16 17 3.007635 CCCACAAATACTCCTTCCGTTC 58.992 50.000 0.00 0.00 0.00 3.95
17 18 2.878526 GCCCACAAATACTCCTTCCGTT 60.879 50.000 0.00 0.00 0.00 4.44
18 19 1.339727 GCCCACAAATACTCCTTCCGT 60.340 52.381 0.00 0.00 0.00 4.69
19 20 1.339631 TGCCCACAAATACTCCTTCCG 60.340 52.381 0.00 0.00 0.00 4.30
20 21 2.507407 TGCCCACAAATACTCCTTCC 57.493 50.000 0.00 0.00 0.00 3.46
21 22 8.409358 AAATATATGCCCACAAATACTCCTTC 57.591 34.615 0.00 0.00 0.00 3.46
22 23 9.297037 GTAAATATATGCCCACAAATACTCCTT 57.703 33.333 0.00 0.00 0.00 3.36
23 24 8.444783 TGTAAATATATGCCCACAAATACTCCT 58.555 33.333 0.00 0.00 0.00 3.69
24 25 8.512138 GTGTAAATATATGCCCACAAATACTCC 58.488 37.037 0.00 0.00 0.00 3.85
25 26 9.284968 AGTGTAAATATATGCCCACAAATACTC 57.715 33.333 10.01 0.00 0.00 2.59
26 27 9.284968 GAGTGTAAATATATGCCCACAAATACT 57.715 33.333 10.01 0.00 0.00 2.12
27 28 9.062524 TGAGTGTAAATATATGCCCACAAATAC 57.937 33.333 10.01 0.00 0.00 1.89
28 29 9.062524 GTGAGTGTAAATATATGCCCACAAATA 57.937 33.333 10.01 0.00 0.00 1.40
29 30 7.014230 GGTGAGTGTAAATATATGCCCACAAAT 59.986 37.037 10.01 0.00 0.00 2.32
30 31 6.320164 GGTGAGTGTAAATATATGCCCACAAA 59.680 38.462 10.01 0.00 0.00 2.83
31 32 5.825679 GGTGAGTGTAAATATATGCCCACAA 59.174 40.000 10.01 0.00 0.00 3.33
32 33 5.131977 AGGTGAGTGTAAATATATGCCCACA 59.868 40.000 10.01 0.42 0.00 4.17
33 34 5.621193 AGGTGAGTGTAAATATATGCCCAC 58.379 41.667 0.00 0.00 0.00 4.61
34 35 5.904984 AGGTGAGTGTAAATATATGCCCA 57.095 39.130 0.00 0.00 0.00 5.36
35 36 5.875359 GCTAGGTGAGTGTAAATATATGCCC 59.125 44.000 0.00 0.00 0.00 5.36
36 37 6.464222 TGCTAGGTGAGTGTAAATATATGCC 58.536 40.000 0.00 0.00 0.00 4.40
37 38 8.553459 AATGCTAGGTGAGTGTAAATATATGC 57.447 34.615 0.00 0.00 0.00 3.14
38 39 9.155975 GGAATGCTAGGTGAGTGTAAATATATG 57.844 37.037 0.00 0.00 0.00 1.78
39 40 8.880244 TGGAATGCTAGGTGAGTGTAAATATAT 58.120 33.333 0.00 0.00 0.00 0.86
40 41 8.257602 TGGAATGCTAGGTGAGTGTAAATATA 57.742 34.615 0.00 0.00 0.00 0.86
41 42 7.136822 TGGAATGCTAGGTGAGTGTAAATAT 57.863 36.000 0.00 0.00 0.00 1.28
42 43 6.553953 TGGAATGCTAGGTGAGTGTAAATA 57.446 37.500 0.00 0.00 0.00 1.40
43 44 5.435686 TGGAATGCTAGGTGAGTGTAAAT 57.564 39.130 0.00 0.00 0.00 1.40
44 45 4.901197 TGGAATGCTAGGTGAGTGTAAA 57.099 40.909 0.00 0.00 0.00 2.01
45 46 4.901197 TTGGAATGCTAGGTGAGTGTAA 57.099 40.909 0.00 0.00 0.00 2.41
46 47 4.901197 TTTGGAATGCTAGGTGAGTGTA 57.099 40.909 0.00 0.00 0.00 2.90
47 48 3.788227 TTTGGAATGCTAGGTGAGTGT 57.212 42.857 0.00 0.00 0.00 3.55
48 49 5.649782 ATTTTTGGAATGCTAGGTGAGTG 57.350 39.130 0.00 0.00 0.00 3.51
49 50 5.652452 GGTATTTTTGGAATGCTAGGTGAGT 59.348 40.000 0.00 0.00 0.00 3.41
50 51 5.067805 GGGTATTTTTGGAATGCTAGGTGAG 59.932 44.000 0.00 0.00 0.00 3.51
51 52 4.953579 GGGTATTTTTGGAATGCTAGGTGA 59.046 41.667 0.00 0.00 0.00 4.02
52 53 4.709397 TGGGTATTTTTGGAATGCTAGGTG 59.291 41.667 0.00 0.00 0.00 4.00
53 54 4.709886 GTGGGTATTTTTGGAATGCTAGGT 59.290 41.667 0.00 0.00 0.00 3.08
54 55 4.709397 TGTGGGTATTTTTGGAATGCTAGG 59.291 41.667 0.00 0.00 0.00 3.02
55 56 5.913137 TGTGGGTATTTTTGGAATGCTAG 57.087 39.130 0.00 0.00 0.00 3.42
56 57 6.672266 TTTGTGGGTATTTTTGGAATGCTA 57.328 33.333 0.00 0.00 0.00 3.49
57 58 5.559148 TTTGTGGGTATTTTTGGAATGCT 57.441 34.783 0.00 0.00 0.00 3.79
58 59 6.816134 ATTTTGTGGGTATTTTTGGAATGC 57.184 33.333 0.00 0.00 0.00 3.56
133 134 9.725019 CCCCTTTCTTGCTTTATTTATTTTTCT 57.275 29.630 0.00 0.00 0.00 2.52
134 135 9.719355 TCCCCTTTCTTGCTTTATTTATTTTTC 57.281 29.630 0.00 0.00 0.00 2.29
137 138 9.725019 CTTTCCCCTTTCTTGCTTTATTTATTT 57.275 29.630 0.00 0.00 0.00 1.40
138 139 8.321353 CCTTTCCCCTTTCTTGCTTTATTTATT 58.679 33.333 0.00 0.00 0.00 1.40
139 140 7.457852 ACCTTTCCCCTTTCTTGCTTTATTTAT 59.542 33.333 0.00 0.00 0.00 1.40
140 141 6.785466 ACCTTTCCCCTTTCTTGCTTTATTTA 59.215 34.615 0.00 0.00 0.00 1.40
141 142 5.606749 ACCTTTCCCCTTTCTTGCTTTATTT 59.393 36.000 0.00 0.00 0.00 1.40
142 143 5.012046 CACCTTTCCCCTTTCTTGCTTTATT 59.988 40.000 0.00 0.00 0.00 1.40
143 144 4.528206 CACCTTTCCCCTTTCTTGCTTTAT 59.472 41.667 0.00 0.00 0.00 1.40
144 145 3.895041 CACCTTTCCCCTTTCTTGCTTTA 59.105 43.478 0.00 0.00 0.00 1.85
145 146 2.700371 CACCTTTCCCCTTTCTTGCTTT 59.300 45.455 0.00 0.00 0.00 3.51
146 147 2.319844 CACCTTTCCCCTTTCTTGCTT 58.680 47.619 0.00 0.00 0.00 3.91
147 148 1.481242 CCACCTTTCCCCTTTCTTGCT 60.481 52.381 0.00 0.00 0.00 3.91
148 149 0.969149 CCACCTTTCCCCTTTCTTGC 59.031 55.000 0.00 0.00 0.00 4.01
149 150 1.133167 ACCCACCTTTCCCCTTTCTTG 60.133 52.381 0.00 0.00 0.00 3.02
150 151 1.147191 GACCCACCTTTCCCCTTTCTT 59.853 52.381 0.00 0.00 0.00 2.52
151 152 0.778083 GACCCACCTTTCCCCTTTCT 59.222 55.000 0.00 0.00 0.00 2.52
152 153 0.608308 CGACCCACCTTTCCCCTTTC 60.608 60.000 0.00 0.00 0.00 2.62
153 154 1.458927 CGACCCACCTTTCCCCTTT 59.541 57.895 0.00 0.00 0.00 3.11
154 155 3.167414 CGACCCACCTTTCCCCTT 58.833 61.111 0.00 0.00 0.00 3.95
155 156 3.647771 GCGACCCACCTTTCCCCT 61.648 66.667 0.00 0.00 0.00 4.79
156 157 3.961414 TGCGACCCACCTTTCCCC 61.961 66.667 0.00 0.00 0.00 4.81
157 158 2.671963 GTGCGACCCACCTTTCCC 60.672 66.667 0.00 0.00 38.55 3.97
164 165 1.024579 CATTACCAGGTGCGACCCAC 61.025 60.000 0.76 0.00 39.75 4.61
165 166 1.298340 CATTACCAGGTGCGACCCA 59.702 57.895 0.76 0.00 39.75 4.51
166 167 1.451387 CCATTACCAGGTGCGACCC 60.451 63.158 0.76 0.00 39.75 4.46
167 168 0.743345 GACCATTACCAGGTGCGACC 60.743 60.000 0.76 0.00 40.09 4.79
168 169 0.743345 GGACCATTACCAGGTGCGAC 60.743 60.000 0.76 0.00 40.09 5.19
169 170 1.600107 GGACCATTACCAGGTGCGA 59.400 57.895 0.76 0.00 40.09 5.10
170 171 4.218722 GGACCATTACCAGGTGCG 57.781 61.111 0.76 0.00 40.09 5.34
171 172 0.618458 TGAGGACCATTACCAGGTGC 59.382 55.000 0.76 0.00 46.60 5.01
172 173 1.407437 GCTGAGGACCATTACCAGGTG 60.407 57.143 0.76 0.00 40.09 4.00
173 174 0.912486 GCTGAGGACCATTACCAGGT 59.088 55.000 0.00 0.00 43.46 4.00
174 175 0.181350 GGCTGAGGACCATTACCAGG 59.819 60.000 0.00 0.00 0.00 4.45
175 176 0.181350 GGGCTGAGGACCATTACCAG 59.819 60.000 0.00 0.00 41.30 4.00
176 177 2.307153 GGGCTGAGGACCATTACCA 58.693 57.895 0.00 0.00 41.30 3.25
186 187 4.200092 GTTAATTCCTTAGTGGGCTGAGG 58.800 47.826 0.00 0.00 46.51 3.86
187 188 4.200092 GGTTAATTCCTTAGTGGGCTGAG 58.800 47.826 0.00 0.00 36.20 3.35
188 189 3.589735 TGGTTAATTCCTTAGTGGGCTGA 59.410 43.478 0.00 0.00 36.20 4.26
189 190 3.963129 TGGTTAATTCCTTAGTGGGCTG 58.037 45.455 0.00 0.00 36.20 4.85
190 191 4.341487 GTTGGTTAATTCCTTAGTGGGCT 58.659 43.478 0.00 0.00 36.20 5.19
191 192 3.446161 GGTTGGTTAATTCCTTAGTGGGC 59.554 47.826 0.00 0.00 36.20 5.36
192 193 4.021229 GGGTTGGTTAATTCCTTAGTGGG 58.979 47.826 0.00 0.00 36.20 4.61
193 194 4.668636 TGGGTTGGTTAATTCCTTAGTGG 58.331 43.478 0.00 0.00 37.10 4.00
194 195 6.658188 TTTGGGTTGGTTAATTCCTTAGTG 57.342 37.500 0.00 0.00 0.00 2.74
195 196 8.977412 CATATTTGGGTTGGTTAATTCCTTAGT 58.023 33.333 0.00 0.00 0.00 2.24
196 197 8.977412 ACATATTTGGGTTGGTTAATTCCTTAG 58.023 33.333 0.00 0.00 0.00 2.18
197 198 8.754080 CACATATTTGGGTTGGTTAATTCCTTA 58.246 33.333 0.00 0.00 0.00 2.69
198 199 7.310983 CCACATATTTGGGTTGGTTAATTCCTT 60.311 37.037 0.00 0.00 32.35 3.36
199 200 6.156083 CCACATATTTGGGTTGGTTAATTCCT 59.844 38.462 0.00 0.00 32.35 3.36
200 201 6.070481 ACCACATATTTGGGTTGGTTAATTCC 60.070 38.462 12.50 0.00 41.49 3.01
201 202 6.941857 ACCACATATTTGGGTTGGTTAATTC 58.058 36.000 12.50 0.00 41.49 2.17
202 203 6.498651 TGACCACATATTTGGGTTGGTTAATT 59.501 34.615 12.50 0.00 41.49 1.40
203 204 6.019748 TGACCACATATTTGGGTTGGTTAAT 58.980 36.000 12.50 0.00 41.49 1.40
204 205 5.394738 TGACCACATATTTGGGTTGGTTAA 58.605 37.500 12.50 0.00 41.49 2.01
205 206 4.999310 TGACCACATATTTGGGTTGGTTA 58.001 39.130 12.50 0.00 41.49 2.85
206 207 3.850752 TGACCACATATTTGGGTTGGTT 58.149 40.909 12.50 0.00 41.49 3.67
207 208 3.534357 TGACCACATATTTGGGTTGGT 57.466 42.857 12.50 0.00 41.49 3.67
208 209 3.384467 GGATGACCACATATTTGGGTTGG 59.616 47.826 12.50 0.00 41.49 3.77
209 210 3.066621 CGGATGACCACATATTTGGGTTG 59.933 47.826 12.50 0.00 41.49 3.77
210 211 3.053991 TCGGATGACCACATATTTGGGTT 60.054 43.478 12.50 0.00 41.49 4.11
211 212 2.507886 TCGGATGACCACATATTTGGGT 59.492 45.455 12.50 1.26 41.49 4.51
212 213 3.207265 TCGGATGACCACATATTTGGG 57.793 47.619 12.50 0.00 41.49 4.12
213 214 5.772825 AAATCGGATGACCACATATTTGG 57.227 39.130 6.35 6.35 43.04 3.28
214 215 8.070171 GTCTTAAATCGGATGACCACATATTTG 58.930 37.037 0.00 0.00 36.82 2.32
215 216 7.042051 CGTCTTAAATCGGATGACCACATATTT 60.042 37.037 0.00 0.00 36.82 1.40
216 217 6.423905 CGTCTTAAATCGGATGACCACATATT 59.576 38.462 0.00 0.00 36.82 1.28
217 218 5.926542 CGTCTTAAATCGGATGACCACATAT 59.073 40.000 0.00 0.00 36.82 1.78
218 219 5.286438 CGTCTTAAATCGGATGACCACATA 58.714 41.667 0.00 0.00 36.82 2.29
219 220 4.119862 CGTCTTAAATCGGATGACCACAT 58.880 43.478 0.00 0.00 39.67 3.21
220 221 3.517602 CGTCTTAAATCGGATGACCACA 58.482 45.455 0.00 0.00 35.59 4.17
230 231 1.807742 TGTTTGGGCCGTCTTAAATCG 59.192 47.619 0.00 0.00 0.00 3.34
231 232 2.094906 GGTGTTTGGGCCGTCTTAAATC 60.095 50.000 0.00 0.00 0.00 2.17
232 233 1.890489 GGTGTTTGGGCCGTCTTAAAT 59.110 47.619 0.00 0.00 0.00 1.40
233 234 1.133730 AGGTGTTTGGGCCGTCTTAAA 60.134 47.619 0.00 0.00 0.00 1.52
234 235 0.475044 AGGTGTTTGGGCCGTCTTAA 59.525 50.000 0.00 0.00 0.00 1.85
235 236 0.035739 GAGGTGTTTGGGCCGTCTTA 59.964 55.000 0.00 0.00 0.00 2.10
236 237 1.228154 GAGGTGTTTGGGCCGTCTT 60.228 57.895 0.00 0.00 0.00 3.01
237 238 2.397413 CTGAGGTGTTTGGGCCGTCT 62.397 60.000 0.00 0.00 0.00 4.18
238 239 1.966451 CTGAGGTGTTTGGGCCGTC 60.966 63.158 0.00 0.00 0.00 4.79
239 240 2.113139 CTGAGGTGTTTGGGCCGT 59.887 61.111 0.00 0.00 0.00 5.68
240 241 1.672356 CTCTGAGGTGTTTGGGCCG 60.672 63.158 0.00 0.00 0.00 6.13
241 242 0.110486 TTCTCTGAGGTGTTTGGGCC 59.890 55.000 4.59 0.00 0.00 5.80
242 243 1.239347 GTTCTCTGAGGTGTTTGGGC 58.761 55.000 4.59 0.00 0.00 5.36
243 244 2.638480 TGTTCTCTGAGGTGTTTGGG 57.362 50.000 4.59 0.00 0.00 4.12
244 245 5.300286 AGAATTTGTTCTCTGAGGTGTTTGG 59.700 40.000 4.59 0.00 0.00 3.28
245 246 6.382869 AGAATTTGTTCTCTGAGGTGTTTG 57.617 37.500 4.59 0.00 0.00 2.93
246 247 6.625873 GAGAATTTGTTCTCTGAGGTGTTT 57.374 37.500 4.59 0.00 43.06 2.83
285 286 9.691362 TGTTGCTATTTTTCCTTATTTGTTCTC 57.309 29.630 0.00 0.00 0.00 2.87
295 296 6.149633 GTGATTCGTGTTGCTATTTTTCCTT 58.850 36.000 0.00 0.00 0.00 3.36
296 297 5.616866 CGTGATTCGTGTTGCTATTTTTCCT 60.617 40.000 0.00 0.00 34.52 3.36
312 313 3.663908 GTTGATCTTGCTTCGTGATTCG 58.336 45.455 0.00 0.00 41.41 3.34
320 321 0.874390 TGTGCCGTTGATCTTGCTTC 59.126 50.000 0.00 0.00 0.00 3.86
346 347 7.341769 CCCTGAAATTATATTTTGGGTCAGTCA 59.658 37.037 12.24 0.00 0.00 3.41
357 358 9.492730 ACATGAAAGTCCCCTGAAATTATATTT 57.507 29.630 0.00 0.00 0.00 1.40
362 363 5.885912 GCTACATGAAAGTCCCCTGAAATTA 59.114 40.000 0.00 0.00 0.00 1.40
370 371 5.885912 TCAATTTAGCTACATGAAAGTCCCC 59.114 40.000 0.00 0.00 0.00 4.81
371 372 7.391148 TTCAATTTAGCTACATGAAAGTCCC 57.609 36.000 0.00 0.00 0.00 4.46
410 411 4.516365 GACCCGAGTCAAAGTAGAGAAA 57.484 45.455 0.00 0.00 42.99 2.52
434 435 8.616076 CAAGAGTCATTATAGGGAACATTTGTC 58.384 37.037 0.00 0.00 0.00 3.18
444 445 7.273320 TCGACTTACAAGAGTCATTATAGGG 57.727 40.000 5.94 0.00 44.98 3.53
468 469 6.636044 CGAGTCGTCTTTTAACTAGTCTTGTT 59.364 38.462 3.82 5.05 0.00 2.83
472 473 5.938438 ACGAGTCGTCTTTTAACTAGTCT 57.062 39.130 13.56 0.00 33.69 3.24
680 953 0.741915 GCGAGACTGGAAGAGTAGGG 59.258 60.000 0.00 0.00 37.43 3.53
778 1495 7.945134 AGCTTATGTTGATATTTTCACCATCC 58.055 34.615 0.00 0.00 36.93 3.51
852 1569 8.598916 TCTTTGTAAGTGGAAATGTATGGTCTA 58.401 33.333 0.00 0.00 0.00 2.59
872 1589 8.708378 TGAGGATCACATATATGTTCTCTTTGT 58.292 33.333 15.85 3.29 42.56 2.83
896 1613 6.393171 CAGTATCTGTGAGTGAGAATTGTGA 58.607 40.000 0.00 0.00 0.00 3.58
918 1661 5.554070 TGTGCTCCAACATATCATATCCAG 58.446 41.667 0.00 0.00 0.00 3.86
958 1701 9.712305 TTTTCAAATTCTACTTTGTGGTTTTCA 57.288 25.926 0.00 0.00 37.39 2.69
979 1722 8.424918 GGTCATCAGTAGGATATCTCTTTTTCA 58.575 37.037 2.05 0.00 33.95 2.69
980 1723 7.875554 GGGTCATCAGTAGGATATCTCTTTTTC 59.124 40.741 2.05 0.00 33.95 2.29
1020 1764 0.908198 AGGTGTCTCCCATCAGCTTC 59.092 55.000 0.00 0.00 38.94 3.86
1103 1855 0.332632 ACCAGTGCAACATATGGGCT 59.667 50.000 18.60 1.60 41.43 5.19
1104 1856 0.457035 CACCAGTGCAACATATGGGC 59.543 55.000 7.80 10.87 41.43 5.36
1105 1857 1.745087 GTCACCAGTGCAACATATGGG 59.255 52.381 7.80 0.00 41.43 4.00
1106 1858 1.745087 GGTCACCAGTGCAACATATGG 59.255 52.381 7.80 0.00 41.43 2.74
1119 1871 0.914417 GAAGATGGGGGAGGTCACCA 60.914 60.000 0.00 0.00 42.67 4.17
1131 1883 1.139654 TCCATGGCTCGAAGAAGATGG 59.860 52.381 6.96 0.00 37.72 3.51
1132 1884 2.609427 TCCATGGCTCGAAGAAGATG 57.391 50.000 6.96 0.00 34.09 2.90
1142 1894 3.006752 CCAGTAGAGAGAATCCATGGCTC 59.993 52.174 6.96 8.36 33.66 4.70
1155 1917 1.174783 GCTCCACGAACCAGTAGAGA 58.825 55.000 0.00 0.00 32.80 3.10
1159 1921 0.251653 AGGAGCTCCACGAACCAGTA 60.252 55.000 33.90 0.00 38.89 2.74
1160 1922 1.534235 AGGAGCTCCACGAACCAGT 60.534 57.895 33.90 7.59 38.89 4.00
1183 1945 1.456165 GAAGACGACGAAGCAAAGGAC 59.544 52.381 0.00 0.00 0.00 3.85
1195 1960 1.089920 TGGCGGTAGTAGAAGACGAC 58.910 55.000 0.00 0.00 33.20 4.34
1251 2016 2.136229 GCCCAGGATTGGCCATTCC 61.136 63.158 31.24 31.24 43.58 3.01
1455 2226 0.098905 CGAAGATCTCGGCGAACTCA 59.901 55.000 12.13 0.00 44.20 3.41
1918 2695 2.280592 GTCGACCCTGCGTTTGGT 60.281 61.111 3.51 0.00 37.64 3.67
1931 2708 0.681887 TGGTCGGAGCTTATGGTCGA 60.682 55.000 8.82 0.00 41.26 4.20
1938 2715 0.245539 CCTCGTTTGGTCGGAGCTTA 59.754 55.000 8.82 0.00 0.00 3.09
1974 2757 1.256812 TGAAGGACGAGAGCATGTCA 58.743 50.000 0.00 0.00 36.83 3.58
2004 2787 2.645014 CTGTACTCGCTCGCGTCG 60.645 66.667 5.77 11.68 40.74 5.12
2091 2892 4.954089 AGAGAAGGTAGAAGAACCAGGAT 58.046 43.478 0.00 0.00 42.40 3.24
2125 3169 0.033601 AGGATCCTCTGCTCGACACT 60.034 55.000 9.02 0.00 0.00 3.55
2127 3171 1.039785 CCAGGATCCTCTGCTCGACA 61.040 60.000 12.69 0.00 33.64 4.35
2183 3242 3.126703 AACACCACCATGCCGTCCA 62.127 57.895 0.00 0.00 0.00 4.02
2589 3648 1.660575 CTTCGGCTCGACAACGTGT 60.661 57.895 0.00 0.00 40.69 4.49
2649 3708 0.882474 CGACGTTCCTCCTCTTGACT 59.118 55.000 0.00 0.00 0.00 3.41
2757 3818 0.442310 TGTACGTACGTGTCCGCTAC 59.558 55.000 30.25 18.33 37.70 3.58
2758 3819 1.062440 CATGTACGTACGTGTCCGCTA 59.938 52.381 31.05 5.88 38.18 4.26
2782 3848 6.590292 ACCACTCTTGCATACATATAATACGC 59.410 38.462 0.00 0.00 0.00 4.42
2868 3934 6.202188 ACACCTACACACGTCTATTTTTCTTG 59.798 38.462 0.00 0.00 0.00 3.02
2931 3997 5.835280 CCCATGCCTCCATTTTCTATTTAGT 59.165 40.000 0.00 0.00 0.00 2.24
3052 4126 4.913335 AAGAAAGTGAGCATGCATATGG 57.087 40.909 21.98 0.00 34.79 2.74
3160 4239 1.269257 GCCGAATTAATGCTGCTTCCC 60.269 52.381 2.70 0.00 0.00 3.97
3217 4296 5.240183 CAGACACATCATCCACTCTGTTTTT 59.760 40.000 0.00 0.00 0.00 1.94
3218 4297 4.758674 CAGACACATCATCCACTCTGTTTT 59.241 41.667 0.00 0.00 0.00 2.43
3219 4298 4.321718 CAGACACATCATCCACTCTGTTT 58.678 43.478 0.00 0.00 0.00 2.83
3220 4299 3.867600 GCAGACACATCATCCACTCTGTT 60.868 47.826 0.00 0.00 0.00 3.16
3221 4300 2.354503 GCAGACACATCATCCACTCTGT 60.355 50.000 0.00 0.00 0.00 3.41
3222 4301 2.277969 GCAGACACATCATCCACTCTG 58.722 52.381 0.00 0.00 0.00 3.35
3223 4302 1.209019 GGCAGACACATCATCCACTCT 59.791 52.381 0.00 0.00 0.00 3.24
3224 4303 1.065926 TGGCAGACACATCATCCACTC 60.066 52.381 0.00 0.00 0.00 3.51
3225 4304 0.986527 TGGCAGACACATCATCCACT 59.013 50.000 0.00 0.00 0.00 4.00
3226 4305 2.048444 ATGGCAGACACATCATCCAC 57.952 50.000 0.00 0.00 33.16 4.02
3227 4306 2.240414 AGAATGGCAGACACATCATCCA 59.760 45.455 0.00 0.00 34.34 3.41
3228 4307 2.617308 CAGAATGGCAGACACATCATCC 59.383 50.000 0.00 0.00 0.00 3.51
3229 4308 2.033049 GCAGAATGGCAGACACATCATC 59.967 50.000 0.00 0.00 35.86 2.92
3230 4309 2.022195 GCAGAATGGCAGACACATCAT 58.978 47.619 0.00 0.00 35.86 2.45
3231 4310 1.271488 TGCAGAATGGCAGACACATCA 60.271 47.619 0.00 0.00 39.25 3.07
3232 4311 1.456296 TGCAGAATGGCAGACACATC 58.544 50.000 0.00 0.00 39.25 3.06
3233 4312 3.656457 TGCAGAATGGCAGACACAT 57.344 47.368 0.00 0.00 39.25 3.21
3240 4319 2.224042 CGGTCTATACTGCAGAATGGCA 60.224 50.000 23.35 0.00 42.53 4.92
3241 4320 2.224066 ACGGTCTATACTGCAGAATGGC 60.224 50.000 23.35 8.67 35.17 4.40
3242 4321 3.553096 GGACGGTCTATACTGCAGAATGG 60.553 52.174 23.35 7.89 35.17 3.16
3243 4322 3.643763 GGACGGTCTATACTGCAGAATG 58.356 50.000 23.35 7.54 35.17 2.67
3244 4323 2.293677 CGGACGGTCTATACTGCAGAAT 59.706 50.000 23.35 0.27 35.17 2.40
3245 4324 1.674441 CGGACGGTCTATACTGCAGAA 59.326 52.381 23.35 4.27 35.17 3.02
3246 4325 1.134310 TCGGACGGTCTATACTGCAGA 60.134 52.381 23.35 4.31 35.17 4.26
3247 4326 1.306148 TCGGACGGTCTATACTGCAG 58.694 55.000 13.48 13.48 35.17 4.41
3248 4327 1.878088 GATCGGACGGTCTATACTGCA 59.122 52.381 8.23 0.00 35.17 4.41
3249 4328 2.152830 AGATCGGACGGTCTATACTGC 58.847 52.381 5.58 0.00 35.17 4.40
3250 4329 7.789273 AATATAGATCGGACGGTCTATACTG 57.211 40.000 27.45 0.00 40.68 2.74
3251 4330 8.045507 TCAAATATAGATCGGACGGTCTATACT 58.954 37.037 27.45 19.06 40.68 2.12
3252 4331 8.121708 GTCAAATATAGATCGGACGGTCTATAC 58.878 40.741 27.45 17.83 40.68 1.47
3253 4332 7.010830 CGTCAAATATAGATCGGACGGTCTATA 59.989 40.741 27.21 27.21 42.97 1.31
3254 4333 6.183360 CGTCAAATATAGATCGGACGGTCTAT 60.183 42.308 25.24 25.24 42.97 1.98
3255 4334 5.121298 CGTCAAATATAGATCGGACGGTCTA 59.879 44.000 16.04 16.04 42.97 2.59
3256 4335 4.083431 CGTCAAATATAGATCGGACGGTCT 60.083 45.833 12.50 12.50 42.97 3.85
3257 4336 4.156915 CGTCAAATATAGATCGGACGGTC 58.843 47.826 13.06 0.00 42.97 4.79
3258 4337 4.156664 CGTCAAATATAGATCGGACGGT 57.843 45.455 13.06 0.00 42.97 4.83
3260 4339 4.414999 TCCGTCAAATATAGATCGGACG 57.585 45.455 13.64 13.64 45.37 4.79
3263 4342 7.221067 GCTTTCTATCCGTCAAATATAGATCGG 59.779 40.741 0.00 0.00 39.40 4.18
3264 4343 7.755373 TGCTTTCTATCCGTCAAATATAGATCG 59.245 37.037 0.00 0.00 33.44 3.69
3265 4344 8.988064 TGCTTTCTATCCGTCAAATATAGATC 57.012 34.615 0.00 0.00 33.44 2.75
3266 4345 9.778741 TTTGCTTTCTATCCGTCAAATATAGAT 57.221 29.630 0.00 0.00 33.44 1.98
3267 4346 9.042008 GTTTGCTTTCTATCCGTCAAATATAGA 57.958 33.333 0.00 0.00 31.89 1.98
3268 4347 9.046296 AGTTTGCTTTCTATCCGTCAAATATAG 57.954 33.333 0.00 0.00 0.00 1.31
3269 4348 8.958119 AGTTTGCTTTCTATCCGTCAAATATA 57.042 30.769 0.00 0.00 0.00 0.86
3270 4349 7.865706 AGTTTGCTTTCTATCCGTCAAATAT 57.134 32.000 0.00 0.00 0.00 1.28
3271 4350 8.826710 CATAGTTTGCTTTCTATCCGTCAAATA 58.173 33.333 0.00 0.00 0.00 1.40
3272 4351 7.201732 CCATAGTTTGCTTTCTATCCGTCAAAT 60.202 37.037 0.00 0.00 0.00 2.32
3273 4352 6.093495 CCATAGTTTGCTTTCTATCCGTCAAA 59.907 38.462 0.00 0.00 0.00 2.69
3274 4353 5.584649 CCATAGTTTGCTTTCTATCCGTCAA 59.415 40.000 0.00 0.00 0.00 3.18
3275 4354 5.116180 CCATAGTTTGCTTTCTATCCGTCA 58.884 41.667 0.00 0.00 0.00 4.35
3276 4355 5.116882 ACCATAGTTTGCTTTCTATCCGTC 58.883 41.667 0.00 0.00 0.00 4.79
3277 4356 5.099042 ACCATAGTTTGCTTTCTATCCGT 57.901 39.130 0.00 0.00 0.00 4.69
3278 4357 7.730364 ATTACCATAGTTTGCTTTCTATCCG 57.270 36.000 0.00 0.00 0.00 4.18
3311 4390 0.702316 AGAGGGGTGCGGGTATTTTT 59.298 50.000 0.00 0.00 0.00 1.94
3312 4391 0.255033 GAGAGGGGTGCGGGTATTTT 59.745 55.000 0.00 0.00 0.00 1.82
3313 4392 0.912487 TGAGAGGGGTGCGGGTATTT 60.912 55.000 0.00 0.00 0.00 1.40
3314 4393 1.306654 TGAGAGGGGTGCGGGTATT 60.307 57.895 0.00 0.00 0.00 1.89
3315 4394 2.064581 GTGAGAGGGGTGCGGGTAT 61.065 63.158 0.00 0.00 0.00 2.73
3316 4395 2.682494 GTGAGAGGGGTGCGGGTA 60.682 66.667 0.00 0.00 0.00 3.69
3317 4396 4.954118 TGTGAGAGGGGTGCGGGT 62.954 66.667 0.00 0.00 0.00 5.28
3318 4397 2.484287 AAATGTGAGAGGGGTGCGGG 62.484 60.000 0.00 0.00 0.00 6.13
3319 4398 1.002134 AAATGTGAGAGGGGTGCGG 60.002 57.895 0.00 0.00 0.00 5.69
3320 4399 0.606401 ACAAATGTGAGAGGGGTGCG 60.606 55.000 0.00 0.00 0.00 5.34
3321 4400 2.489938 TACAAATGTGAGAGGGGTGC 57.510 50.000 0.00 0.00 0.00 5.01
3322 4401 4.021102 ACTTACAAATGTGAGAGGGGTG 57.979 45.455 11.75 0.00 35.49 4.61
3323 4402 5.280521 CCTTACTTACAAATGTGAGAGGGGT 60.281 44.000 11.75 0.00 35.49 4.95
3324 4403 5.186198 CCTTACTTACAAATGTGAGAGGGG 58.814 45.833 11.75 6.59 35.49 4.79
3325 4404 4.636206 GCCTTACTTACAAATGTGAGAGGG 59.364 45.833 11.75 10.42 35.49 4.30
3326 4405 4.636206 GGCCTTACTTACAAATGTGAGAGG 59.364 45.833 11.75 9.67 35.49 3.69
3327 4406 5.491982 AGGCCTTACTTACAAATGTGAGAG 58.508 41.667 11.75 0.78 35.49 3.20
3328 4407 5.499004 AGGCCTTACTTACAAATGTGAGA 57.501 39.130 11.75 0.00 35.49 3.27
3329 4408 5.123979 GGAAGGCCTTACTTACAAATGTGAG 59.876 44.000 21.43 4.00 37.62 3.51
3330 4409 5.007682 GGAAGGCCTTACTTACAAATGTGA 58.992 41.667 21.43 0.00 31.41 3.58
3331 4410 4.157840 GGGAAGGCCTTACTTACAAATGTG 59.842 45.833 27.11 0.00 32.75 3.21
3332 4411 4.044191 AGGGAAGGCCTTACTTACAAATGT 59.956 41.667 27.11 0.00 32.75 2.71
3333 4412 4.600062 AGGGAAGGCCTTACTTACAAATG 58.400 43.478 27.11 0.00 32.75 2.32
3334 4413 4.625564 CGAGGGAAGGCCTTACTTACAAAT 60.626 45.833 27.11 4.98 32.75 2.32
3335 4414 3.307199 CGAGGGAAGGCCTTACTTACAAA 60.307 47.826 27.11 0.00 32.75 2.83
3336 4415 2.235402 CGAGGGAAGGCCTTACTTACAA 59.765 50.000 27.11 0.00 32.75 2.41
3337 4416 1.829222 CGAGGGAAGGCCTTACTTACA 59.171 52.381 27.11 0.00 32.75 2.41
3338 4417 1.829849 ACGAGGGAAGGCCTTACTTAC 59.170 52.381 27.11 16.46 0.00 2.34
3339 4418 2.242882 ACGAGGGAAGGCCTTACTTA 57.757 50.000 27.11 0.00 0.00 2.24
3340 4419 1.278413 GAACGAGGGAAGGCCTTACTT 59.722 52.381 27.11 20.89 0.00 2.24
3341 4420 0.903236 GAACGAGGGAAGGCCTTACT 59.097 55.000 27.11 22.84 0.00 2.24
3342 4421 0.611714 TGAACGAGGGAAGGCCTTAC 59.388 55.000 20.56 20.56 0.00 2.34
3343 4422 1.485066 GATGAACGAGGGAAGGCCTTA 59.515 52.381 20.54 0.00 0.00 2.69
3344 4423 0.253327 GATGAACGAGGGAAGGCCTT 59.747 55.000 20.65 20.65 0.00 4.35
3345 4424 0.618968 AGATGAACGAGGGAAGGCCT 60.619 55.000 0.00 0.00 0.00 5.19
3346 4425 0.253327 AAGATGAACGAGGGAAGGCC 59.747 55.000 0.00 0.00 0.00 5.19
3347 4426 1.740025 CAAAGATGAACGAGGGAAGGC 59.260 52.381 0.00 0.00 0.00 4.35
3348 4427 3.003480 GACAAAGATGAACGAGGGAAGG 58.997 50.000 0.00 0.00 0.00 3.46
3349 4428 3.929610 GAGACAAAGATGAACGAGGGAAG 59.070 47.826 0.00 0.00 0.00 3.46
3350 4429 3.306780 GGAGACAAAGATGAACGAGGGAA 60.307 47.826 0.00 0.00 0.00 3.97
3351 4430 2.233922 GGAGACAAAGATGAACGAGGGA 59.766 50.000 0.00 0.00 0.00 4.20
3352 4431 2.622436 GGAGACAAAGATGAACGAGGG 58.378 52.381 0.00 0.00 0.00 4.30
3353 4432 2.028112 TGGGAGACAAAGATGAACGAGG 60.028 50.000 0.00 0.00 0.00 4.63
3354 4433 2.996621 GTGGGAGACAAAGATGAACGAG 59.003 50.000 0.00 0.00 0.00 4.18
3355 4434 2.367241 TGTGGGAGACAAAGATGAACGA 59.633 45.455 0.00 0.00 0.00 3.85
3356 4435 2.766313 TGTGGGAGACAAAGATGAACG 58.234 47.619 0.00 0.00 0.00 3.95
3365 4444 6.378564 TGAGTTGTTTATTTTGTGGGAGACAA 59.621 34.615 0.00 0.00 43.11 3.18
3366 4445 5.888724 TGAGTTGTTTATTTTGTGGGAGACA 59.111 36.000 0.00 0.00 0.00 3.41
3367 4446 6.385649 TGAGTTGTTTATTTTGTGGGAGAC 57.614 37.500 0.00 0.00 0.00 3.36
3368 4447 8.877864 ATATGAGTTGTTTATTTTGTGGGAGA 57.122 30.769 0.00 0.00 0.00 3.71
3392 4471 9.862371 TTGTACGGAACATTAAAATGCATTTAT 57.138 25.926 24.35 12.80 40.04 1.40
3393 4472 9.130312 GTTGTACGGAACATTAAAATGCATTTA 57.870 29.630 24.35 10.96 40.04 1.40
3394 4473 7.653713 TGTTGTACGGAACATTAAAATGCATTT 59.346 29.630 18.99 18.99 40.04 2.32
3395 4474 7.148641 TGTTGTACGGAACATTAAAATGCATT 58.851 30.769 5.99 5.99 40.04 3.56
3396 4475 6.682746 TGTTGTACGGAACATTAAAATGCAT 58.317 32.000 0.00 0.00 40.04 3.96
3397 4476 6.073327 TGTTGTACGGAACATTAAAATGCA 57.927 33.333 2.60 0.00 40.04 3.96
3398 4477 6.398101 CGTTGTTGTACGGAACATTAAAATGC 60.398 38.462 2.60 0.00 38.10 3.56
3399 4478 6.398101 GCGTTGTTGTACGGAACATTAAAATG 60.398 38.462 1.13 1.13 41.65 2.32
3400 4479 5.626132 GCGTTGTTGTACGGAACATTAAAAT 59.374 36.000 0.10 0.00 41.65 1.82
3401 4480 4.968788 GCGTTGTTGTACGGAACATTAAAA 59.031 37.500 0.10 0.00 41.65 1.52
3402 4481 4.034858 TGCGTTGTTGTACGGAACATTAAA 59.965 37.500 0.10 0.00 38.93 1.52
3403 4482 3.558829 TGCGTTGTTGTACGGAACATTAA 59.441 39.130 0.10 0.00 38.93 1.40
3404 4483 3.129109 TGCGTTGTTGTACGGAACATTA 58.871 40.909 0.10 0.00 38.93 1.90
3405 4484 1.941294 TGCGTTGTTGTACGGAACATT 59.059 42.857 0.10 0.00 38.93 2.71
3406 4485 1.584175 TGCGTTGTTGTACGGAACAT 58.416 45.000 0.10 0.00 38.93 2.71
3407 4486 1.261885 CATGCGTTGTTGTACGGAACA 59.738 47.619 0.00 0.00 44.82 3.18
3408 4487 1.399215 CCATGCGTTGTTGTACGGAAC 60.399 52.381 0.00 0.00 44.82 3.62
3409 4488 0.869068 CCATGCGTTGTTGTACGGAA 59.131 50.000 0.00 0.00 44.82 4.30
3410 4489 1.570347 GCCATGCGTTGTTGTACGGA 61.570 55.000 0.00 0.00 45.70 4.69
3411 4490 1.154301 GCCATGCGTTGTTGTACGG 60.154 57.895 0.00 0.00 41.65 4.02
3412 4491 1.154301 GGCCATGCGTTGTTGTACG 60.154 57.895 0.00 0.00 44.09 3.67
3413 4492 1.211709 GGGCCATGCGTTGTTGTAC 59.788 57.895 4.39 0.00 0.00 2.90
3414 4493 0.958382 GAGGGCCATGCGTTGTTGTA 60.958 55.000 6.18 0.00 0.00 2.41
3415 4494 2.203480 AGGGCCATGCGTTGTTGT 60.203 55.556 6.18 0.00 0.00 3.32
3416 4495 1.526575 AAGAGGGCCATGCGTTGTTG 61.527 55.000 6.18 0.00 0.00 3.33
3417 4496 1.228552 AAGAGGGCCATGCGTTGTT 60.229 52.632 6.18 0.00 0.00 2.83
3418 4497 1.973281 CAAGAGGGCCATGCGTTGT 60.973 57.895 6.18 0.00 0.00 3.32
3419 4498 2.879907 CAAGAGGGCCATGCGTTG 59.120 61.111 6.18 0.00 0.00 4.10
3420 4499 2.196997 TAGCAAGAGGGCCATGCGTT 62.197 55.000 19.01 8.89 44.60 4.84
3421 4500 2.599645 CTAGCAAGAGGGCCATGCGT 62.600 60.000 19.01 12.17 44.60 5.24
3422 4501 1.890979 CTAGCAAGAGGGCCATGCG 60.891 63.158 19.01 6.45 44.60 4.73
3423 4502 0.394899 AACTAGCAAGAGGGCCATGC 60.395 55.000 17.92 17.92 40.34 4.06
3424 4503 1.065199 TGAACTAGCAAGAGGGCCATG 60.065 52.381 6.18 2.55 0.00 3.66
3425 4504 1.211457 CTGAACTAGCAAGAGGGCCAT 59.789 52.381 6.18 0.00 0.00 4.40
3426 4505 0.615331 CTGAACTAGCAAGAGGGCCA 59.385 55.000 6.18 0.00 0.00 5.36
3427 4506 0.905357 TCTGAACTAGCAAGAGGGCC 59.095 55.000 0.00 0.00 0.00 5.80
3428 4507 2.998316 ATCTGAACTAGCAAGAGGGC 57.002 50.000 0.00 0.00 0.00 5.19
3429 4508 7.147915 GGATATCTATCTGAACTAGCAAGAGGG 60.148 44.444 2.05 0.00 33.28 4.30
3430 4509 7.395772 TGGATATCTATCTGAACTAGCAAGAGG 59.604 40.741 2.05 0.00 33.28 3.69
3431 4510 8.347004 TGGATATCTATCTGAACTAGCAAGAG 57.653 38.462 2.05 0.00 33.28 2.85
3432 4511 8.712228 TTGGATATCTATCTGAACTAGCAAGA 57.288 34.615 2.05 0.00 33.28 3.02
3433 4512 9.941325 ATTTGGATATCTATCTGAACTAGCAAG 57.059 33.333 2.05 0.00 33.28 4.01
3435 4514 9.935241 GAATTTGGATATCTATCTGAACTAGCA 57.065 33.333 2.05 0.00 33.28 3.49
3436 4515 9.377312 GGAATTTGGATATCTATCTGAACTAGC 57.623 37.037 2.05 0.00 33.28 3.42
3439 4518 8.717717 TGTGGAATTTGGATATCTATCTGAACT 58.282 33.333 2.05 0.00 33.28 3.01
3440 4519 8.908786 TGTGGAATTTGGATATCTATCTGAAC 57.091 34.615 2.05 0.00 33.28 3.18
3457 4536 8.020819 CACTATTCAACAAACGTATGTGGAATT 58.979 33.333 13.55 0.00 46.86 2.17
3467 4546 2.946329 TGGCACACTATTCAACAAACGT 59.054 40.909 0.00 0.00 0.00 3.99
3498 4577 1.070289 GATCGGTTGATCCCCCTGTAC 59.930 57.143 0.00 0.00 44.39 2.90
3499 4578 1.420430 GATCGGTTGATCCCCCTGTA 58.580 55.000 0.00 0.00 44.39 2.74
3500 4579 2.221918 GATCGGTTGATCCCCCTGT 58.778 57.895 0.00 0.00 44.39 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.