Multiple sequence alignment - TraesCS5A01G505000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G505000 chr5A 100.000 8452 0 0 480 8931 670414810 670406359 0.000000e+00 15609.0
1 TraesCS5A01G505000 chr5A 94.453 685 30 7 1797 2478 631800313 631800992 0.000000e+00 1048.0
2 TraesCS5A01G505000 chr5A 100.000 295 0 0 1 295 670415289 670414995 6.100000e-151 545.0
3 TraesCS5A01G505000 chr5A 92.788 208 12 3 2519 2725 631801001 631801206 1.890000e-76 298.0
4 TraesCS5A01G505000 chr5A 90.076 131 3 3 2971 3100 670412204 670412083 2.580000e-35 161.0
5 TraesCS5A01G505000 chr5A 90.076 131 3 3 3086 3207 670412319 670412190 2.580000e-35 161.0
6 TraesCS5A01G505000 chr4D 92.303 3274 164 45 3088 6333 488655457 488652244 0.000000e+00 4569.0
7 TraesCS5A01G505000 chr4D 98.014 1863 27 3 6333 8195 488652123 488650271 0.000000e+00 3227.0
8 TraesCS5A01G505000 chr4D 91.582 2079 119 34 1024 3087 488657388 488655351 0.000000e+00 2819.0
9 TraesCS5A01G505000 chr4D 92.093 430 8 7 568 995 488658088 488657683 4.650000e-162 582.0
10 TraesCS5A01G505000 chr4D 85.981 321 19 6 1 295 488658494 488658174 4.020000e-83 320.0
11 TraesCS5A01G505000 chr4D 93.056 72 5 0 480 551 488658144 488658073 1.230000e-18 106.0
12 TraesCS5A01G505000 chr4B 91.929 3308 179 50 3085 6333 626012417 626009139 0.000000e+00 4549.0
13 TraesCS5A01G505000 chr4B 94.989 1816 71 7 6386 8195 626008876 626007075 0.000000e+00 2832.0
14 TraesCS5A01G505000 chr4B 91.767 1834 98 30 1076 2893 626014240 626012444 0.000000e+00 2501.0
15 TraesCS5A01G505000 chr4B 85.523 373 15 12 598 948 626015014 626014659 3.970000e-93 353.0
16 TraesCS5A01G505000 chr4B 89.820 167 14 1 8757 8920 73657194 73657360 2.530000e-50 211.0
17 TraesCS5A01G505000 chr4B 89.262 149 7 7 2939 3086 626012449 626012309 2.560000e-40 178.0
18 TraesCS5A01G505000 chr3B 91.585 915 57 12 1576 2486 9493155 9494053 0.000000e+00 1245.0
19 TraesCS5A01G505000 chr3B 90.691 376 27 7 8563 8931 759701080 759700706 2.240000e-135 494.0
20 TraesCS5A01G505000 chr3B 86.652 457 40 12 1097 1547 9492714 9493155 3.750000e-133 486.0
21 TraesCS5A01G505000 chr3B 91.729 266 22 0 8279 8544 759701565 759701300 3.940000e-98 370.0
22 TraesCS5A01G505000 chr3B 93.269 208 11 3 2519 2725 9494054 9494259 4.050000e-78 303.0
23 TraesCS5A01G505000 chr1A 94.049 689 32 7 1794 2478 50188846 50189529 0.000000e+00 1037.0
24 TraesCS5A01G505000 chr1A 92.308 208 13 3 2519 2725 50189538 50189743 8.770000e-75 292.0
25 TraesCS5A01G505000 chr1A 92.233 206 16 0 2278 2483 509379777 509379982 8.770000e-75 292.0
26 TraesCS5A01G505000 chr1A 92.308 208 13 3 2519 2725 509379986 509380191 8.770000e-75 292.0
27 TraesCS5A01G505000 chr1A 77.880 217 34 13 8279 8488 26197602 26197393 1.220000e-23 122.0
28 TraesCS5A01G505000 chr4A 93.723 685 34 7 1797 2478 126140135 126140813 0.000000e+00 1018.0
29 TraesCS5A01G505000 chr4A 93.676 253 15 1 2226 2478 742759678 742759929 2.350000e-100 377.0
30 TraesCS5A01G505000 chr4A 93.269 208 11 3 2519 2725 742759938 742760143 4.050000e-78 303.0
31 TraesCS5A01G505000 chr4A 91.827 208 14 3 2519 2725 126140822 126141027 4.080000e-73 287.0
32 TraesCS5A01G505000 chr3A 89.967 598 31 11 8352 8920 547221920 547222517 0.000000e+00 745.0
33 TraesCS5A01G505000 chr3A 96.512 86 2 1 8279 8363 547214529 547214614 3.360000e-29 141.0
34 TraesCS5A01G505000 chr5B 86.129 620 52 20 940 1547 123002565 123001968 9.780000e-179 638.0
35 TraesCS5A01G505000 chr5B 86.479 355 31 9 1576 1927 123001968 123001628 3.040000e-99 374.0
36 TraesCS5A01G505000 chr1D 92.013 313 19 4 8616 8922 485976628 485976316 1.380000e-117 435.0
37 TraesCS5A01G505000 chr1D 95.620 137 6 0 8278 8414 485976764 485976628 4.200000e-53 220.0
38 TraesCS5A01G505000 chr1D 84.783 92 14 0 8279 8370 206836211 206836302 9.550000e-15 93.5
39 TraesCS5A01G505000 chr3D 92.667 300 18 3 8627 8922 428896528 428896229 6.410000e-116 429.0
40 TraesCS5A01G505000 chr3D 89.831 295 23 4 8279 8567 428896837 428896544 1.100000e-98 372.0
41 TraesCS5A01G505000 chr2B 94.466 253 13 1 2226 2478 791115207 791115458 1.090000e-103 388.0
42 TraesCS5A01G505000 chr2B 93.269 208 11 3 2519 2725 791115467 791115672 4.050000e-78 303.0
43 TraesCS5A01G505000 chr2A 89.272 261 20 1 8279 8539 394659562 394659310 4.020000e-83 320.0
44 TraesCS5A01G505000 chr2A 89.535 172 15 1 8752 8920 394658954 394658783 1.950000e-51 215.0
45 TraesCS5A01G505000 chr2A 88.953 172 16 3 8596 8765 394659143 394658973 9.090000e-50 209.0
46 TraesCS5A01G505000 chr6B 80.597 134 20 6 8279 8409 2034887 2035017 2.050000e-16 99.0
47 TraesCS5A01G505000 chr7D 76.000 200 38 9 8282 8476 21286372 21286178 2.650000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G505000 chr5A 670406359 670415289 8930 True 4119.000000 15609 95.038000 1 8931 4 chr5A.!!$R1 8930
1 TraesCS5A01G505000 chr5A 631800313 631801206 893 False 673.000000 1048 93.620500 1797 2725 2 chr5A.!!$F1 928
2 TraesCS5A01G505000 chr4D 488650271 488658494 8223 True 1937.166667 4569 92.171500 1 8195 6 chr4D.!!$R1 8194
3 TraesCS5A01G505000 chr4B 626007075 626015014 7939 True 2082.600000 4549 90.694000 598 8195 5 chr4B.!!$R1 7597
4 TraesCS5A01G505000 chr3B 9492714 9494259 1545 False 678.000000 1245 90.502000 1097 2725 3 chr3B.!!$F1 1628
5 TraesCS5A01G505000 chr3B 759700706 759701565 859 True 432.000000 494 91.210000 8279 8931 2 chr3B.!!$R1 652
6 TraesCS5A01G505000 chr1A 50188846 50189743 897 False 664.500000 1037 93.178500 1794 2725 2 chr1A.!!$F1 931
7 TraesCS5A01G505000 chr4A 126140135 126141027 892 False 652.500000 1018 92.775000 1797 2725 2 chr4A.!!$F1 928
8 TraesCS5A01G505000 chr3A 547221920 547222517 597 False 745.000000 745 89.967000 8352 8920 1 chr3A.!!$F2 568
9 TraesCS5A01G505000 chr5B 123001628 123002565 937 True 506.000000 638 86.304000 940 1927 2 chr5B.!!$R1 987
10 TraesCS5A01G505000 chr3D 428896229 428896837 608 True 400.500000 429 91.249000 8279 8922 2 chr3D.!!$R1 643
11 TraesCS5A01G505000 chr2A 394658783 394659562 779 True 248.000000 320 89.253333 8279 8920 3 chr2A.!!$R1 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
753 786 0.463620 CCCGGCCCATTTGTTATTGG 59.536 55.000 0.00 0.00 0.00 3.16 F
1526 1890 0.179001 AGTTGTTTCCCAGTTCCCCG 60.179 55.000 0.00 0.00 0.00 5.73 F
1646 2011 0.446616 GCGACGATTTGGTCCCTTTC 59.553 55.000 0.00 0.00 33.30 2.62 F
1717 2084 0.663688 CTCCAGCGATGCGTAGTAGT 59.336 55.000 0.00 0.00 0.00 2.73 F
2968 3343 1.680207 GCATCTCTTTGGGCCTTCATC 59.320 52.381 4.53 0.00 0.00 2.92 F
4091 4479 0.253894 TGGTGTGCTGGGATCATCTG 59.746 55.000 0.00 0.00 0.00 2.90 F
5552 5987 0.036164 TACCCTCGTGTGCAAATGCT 59.964 50.000 6.97 0.00 42.66 3.79 F
5957 6396 1.207089 TCCGTAGCTGCTGCAATTACT 59.793 47.619 18.42 1.68 42.74 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1695 2060 0.179134 ACTACGCATCGCTGGAGAAC 60.179 55.000 0.00 0.0 0.00 3.01 R
3491 3871 2.193306 AGCAAAAGCACAAAGACACG 57.807 45.000 0.00 0.0 0.00 4.49 R
3798 4178 8.759641 CAGATATTCAAGATTCACCTAGAAACG 58.240 37.037 0.00 0.0 40.22 3.60 R
3999 4379 3.933955 GCAGGCATAGCATCAGAGATAAG 59.066 47.826 0.00 0.0 0.00 1.73 R
4356 4744 0.623324 CACCCATACCTCCCCCTGAA 60.623 60.000 0.00 0.0 0.00 3.02 R
6097 6536 0.171007 AATTTGCTCGGGTCAATGCG 59.829 50.000 0.00 0.0 0.00 4.73 R
6429 7079 0.037326 CACCTTGCTTCCGCTAGTGA 60.037 55.000 4.44 0.0 37.31 3.41 R
8158 8814 0.984230 TTCCTTCGGCTGATTCCACT 59.016 50.000 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 8.519492 TTTTTGAATAACTTGTATTGCTGCTC 57.481 30.769 0.00 0.00 0.00 4.26
61 62 6.816134 TTGAATAACTTGTATTGCTGCTCA 57.184 33.333 0.00 0.00 0.00 4.26
62 63 6.182039 TGAATAACTTGTATTGCTGCTCAC 57.818 37.500 0.00 0.00 0.00 3.51
63 64 4.864916 ATAACTTGTATTGCTGCTCACG 57.135 40.909 0.00 0.00 0.00 4.35
64 65 1.442769 ACTTGTATTGCTGCTCACGG 58.557 50.000 0.00 0.00 0.00 4.94
65 66 1.001974 ACTTGTATTGCTGCTCACGGA 59.998 47.619 0.00 0.00 0.00 4.69
66 67 2.283298 CTTGTATTGCTGCTCACGGAT 58.717 47.619 0.00 0.00 0.00 4.18
67 68 1.655484 TGTATTGCTGCTCACGGATG 58.345 50.000 0.00 0.00 0.00 3.51
68 69 0.940126 GTATTGCTGCTCACGGATGG 59.060 55.000 0.00 0.00 0.00 3.51
85 91 4.038763 CGGATGGAGTAGCACTTATAACCA 59.961 45.833 0.00 0.00 0.00 3.67
89 95 8.322091 GGATGGAGTAGCACTTATAACCATAAT 58.678 37.037 0.00 0.00 37.08 1.28
104 110 6.767524 AACCATAATTAATGAAGGACGCAA 57.232 33.333 0.84 0.00 37.86 4.85
116 122 1.000506 AGGACGCAAGCGAGTCTTAAA 59.999 47.619 22.30 0.00 41.30 1.52
130 136 5.181690 AGTCTTAAATGCGCTCAACAAAA 57.818 34.783 9.73 0.00 0.00 2.44
150 156 9.737427 AACAAAACAACGTGTATGATAAAATCA 57.263 25.926 0.00 0.00 44.55 2.57
159 165 9.607988 ACGTGTATGATAAAATCAGGAATTGTA 57.392 29.630 0.00 0.00 43.53 2.41
202 225 7.184067 ACCGAGATAGAAGAATAACAACCTT 57.816 36.000 0.00 0.00 0.00 3.50
204 227 6.018669 CCGAGATAGAAGAATAACAACCTTGC 60.019 42.308 0.00 0.00 0.00 4.01
223 246 3.151710 CGATAGGTGGGCCGTGGA 61.152 66.667 0.00 0.00 40.50 4.02
239 262 4.451096 GCCGTGGACATGAATATACGATTT 59.549 41.667 0.00 0.00 33.78 2.17
255 278 4.298332 ACGATTTCCACAACAAATTCAGC 58.702 39.130 0.00 0.00 0.00 4.26
265 291 3.899052 ACAAATTCAGCATTCCCATGG 57.101 42.857 4.14 4.14 0.00 3.66
505 532 4.836125 ACACAAACACCTATGAAGCTTG 57.164 40.909 2.10 0.00 0.00 4.01
534 561 3.143728 GTCTTAAGGGCGGTTCTCAAAA 58.856 45.455 1.85 0.00 0.00 2.44
545 572 5.579119 GGCGGTTCTCAAAAGAAAAAGAAAA 59.421 36.000 0.00 0.00 43.04 2.29
546 573 6.455113 GGCGGTTCTCAAAAGAAAAAGAAAAC 60.455 38.462 0.00 0.00 43.04 2.43
547 574 6.310467 GCGGTTCTCAAAAGAAAAAGAAAACT 59.690 34.615 0.00 0.00 43.04 2.66
548 575 7.666377 CGGTTCTCAAAAGAAAAAGAAAACTG 58.334 34.615 0.00 0.00 43.04 3.16
549 576 7.328493 CGGTTCTCAAAAGAAAAAGAAAACTGT 59.672 33.333 0.00 0.00 43.04 3.55
550 577 8.988934 GGTTCTCAAAAGAAAAAGAAAACTGTT 58.011 29.630 0.00 0.00 43.04 3.16
751 784 1.006639 ACTCCCGGCCCATTTGTTATT 59.993 47.619 0.00 0.00 0.00 1.40
752 785 1.408702 CTCCCGGCCCATTTGTTATTG 59.591 52.381 0.00 0.00 0.00 1.90
753 786 0.463620 CCCGGCCCATTTGTTATTGG 59.536 55.000 0.00 0.00 0.00 3.16
754 787 1.190643 CCGGCCCATTTGTTATTGGT 58.809 50.000 0.00 0.00 0.00 3.67
755 788 1.134848 CCGGCCCATTTGTTATTGGTG 60.135 52.381 0.00 0.00 0.00 4.17
785 818 3.057946 CCGGCTCCAAGAAAGAAAGAAAG 60.058 47.826 0.00 0.00 0.00 2.62
786 819 3.815401 CGGCTCCAAGAAAGAAAGAAAGA 59.185 43.478 0.00 0.00 0.00 2.52
788 821 5.221048 CGGCTCCAAGAAAGAAAGAAAGAAA 60.221 40.000 0.00 0.00 0.00 2.52
789 822 6.573434 GGCTCCAAGAAAGAAAGAAAGAAAA 58.427 36.000 0.00 0.00 0.00 2.29
790 823 6.699204 GGCTCCAAGAAAGAAAGAAAGAAAAG 59.301 38.462 0.00 0.00 0.00 2.27
791 824 7.416777 GGCTCCAAGAAAGAAAGAAAGAAAAGA 60.417 37.037 0.00 0.00 0.00 2.52
792 825 7.976175 GCTCCAAGAAAGAAAGAAAGAAAAGAA 59.024 33.333 0.00 0.00 0.00 2.52
793 826 9.860898 CTCCAAGAAAGAAAGAAAGAAAAGAAA 57.139 29.630 0.00 0.00 0.00 2.52
802 835 8.131731 AGAAAGAAAGAAAAGAAAAGACATCCG 58.868 33.333 0.00 0.00 0.00 4.18
804 837 5.532779 AGAAAGAAAAGAAAAGACATCCGCT 59.467 36.000 0.00 0.00 0.00 5.52
805 838 4.756084 AGAAAAGAAAAGACATCCGCTG 57.244 40.909 0.00 0.00 0.00 5.18
806 839 2.997485 AAAGAAAAGACATCCGCTGC 57.003 45.000 0.00 0.00 0.00 5.25
807 840 1.168714 AAGAAAAGACATCCGCTGCC 58.831 50.000 0.00 0.00 0.00 4.85
1367 1723 3.458163 CCTCTCGCTAACGGGGCA 61.458 66.667 0.00 0.00 41.36 5.36
1371 1727 2.762459 TCGCTAACGGGGCATCCT 60.762 61.111 0.00 0.00 40.63 3.24
1526 1890 0.179001 AGTTGTTTCCCAGTTCCCCG 60.179 55.000 0.00 0.00 0.00 5.73
1562 1926 3.192922 GTGGCGTGGTATGCGTCC 61.193 66.667 0.00 0.00 32.41 4.79
1574 1938 1.391933 ATGCGTCCTATGCGGTCTGA 61.392 55.000 0.00 0.00 31.36 3.27
1614 1979 4.520111 TGTGTTGGGTGAATTGAGAATCTG 59.480 41.667 0.00 0.00 34.92 2.90
1636 2001 4.796495 GGGCCTGGGCGACGATTT 62.796 66.667 14.63 0.00 43.06 2.17
1637 2002 3.508840 GGCCTGGGCGACGATTTG 61.509 66.667 3.84 0.00 43.06 2.32
1638 2003 3.508840 GCCTGGGCGACGATTTGG 61.509 66.667 0.00 0.00 0.00 3.28
1639 2004 2.046314 CCTGGGCGACGATTTGGT 60.046 61.111 0.00 0.00 0.00 3.67
1640 2005 2.106683 CCTGGGCGACGATTTGGTC 61.107 63.158 0.00 0.00 0.00 4.02
1641 2006 2.046700 TGGGCGACGATTTGGTCC 60.047 61.111 0.00 0.00 33.30 4.46
1642 2007 2.822701 GGGCGACGATTTGGTCCC 60.823 66.667 0.00 0.00 33.30 4.46
1646 2011 0.446616 GCGACGATTTGGTCCCTTTC 59.553 55.000 0.00 0.00 33.30 2.62
1651 2016 1.338769 CGATTTGGTCCCTTTCGGTCT 60.339 52.381 0.00 0.00 0.00 3.85
1670 2035 1.370900 CTCTGTTGCCGCTTGTTGC 60.371 57.895 0.00 0.00 38.57 4.17
1683 2048 2.432628 GTTGCGAGTCGGAGTGGG 60.433 66.667 15.52 0.00 0.00 4.61
1686 2051 4.436998 GCGAGTCGGAGTGGGTGG 62.437 72.222 15.52 0.00 0.00 4.61
1695 2060 1.256812 GGAGTGGGTGGATTGTTTGG 58.743 55.000 0.00 0.00 0.00 3.28
1713 2080 0.872021 GGTTCTCCAGCGATGCGTAG 60.872 60.000 0.00 0.00 0.00 3.51
1717 2084 0.663688 CTCCAGCGATGCGTAGTAGT 59.336 55.000 0.00 0.00 0.00 2.73
1746 2113 4.610333 TCTGCTCCTTGTTGGATAGTCTA 58.390 43.478 0.00 0.00 45.16 2.59
1760 2127 9.561069 GTTGGATAGTCTATAATGTTGGTGAAT 57.439 33.333 0.00 0.00 0.00 2.57
2058 2428 4.697756 CCGTTCAAGCCAGCCCGA 62.698 66.667 0.00 0.00 0.00 5.14
2183 2556 4.832248 TCGAGTCAATAGCTTTTGATGGT 58.168 39.130 20.35 10.08 37.88 3.55
2256 2629 4.230502 AGTTCCCCAATCACCATGTCTTAT 59.769 41.667 0.00 0.00 0.00 1.73
2314 2687 9.231297 CTGTCACCTGGATTTTTAAAGATAGAA 57.769 33.333 0.00 0.00 0.00 2.10
2360 2733 6.763610 AGGTTTCTGTATAAGATTAGCTGCAC 59.236 38.462 1.02 0.00 33.93 4.57
2508 2881 3.201487 TGATGATGTGGATCCTTGCTCTT 59.799 43.478 14.23 3.19 0.00 2.85
2512 2885 3.795688 TGTGGATCCTTGCTCTTCTTT 57.204 42.857 14.23 0.00 0.00 2.52
2595 2968 2.056577 GCAGTTGTTGATCTTGCTTGC 58.943 47.619 0.00 0.00 0.00 4.01
2631 3004 2.041153 CAAACTTGGCAGTGACCCC 58.959 57.895 0.00 0.00 31.60 4.95
2669 3042 4.431416 TGGTGAGTTTATTGACCAGTGT 57.569 40.909 0.00 0.00 33.44 3.55
2670 3043 4.133820 TGGTGAGTTTATTGACCAGTGTG 58.866 43.478 0.00 0.00 33.44 3.82
2671 3044 3.502211 GGTGAGTTTATTGACCAGTGTGG 59.498 47.826 0.00 0.00 45.02 4.17
2672 3045 3.058224 GTGAGTTTATTGACCAGTGTGGC 60.058 47.826 0.00 0.00 42.67 5.01
2725 3100 9.838339 ACTTCTTGGAAATATATTCGACATTCT 57.162 29.630 0.00 0.00 0.00 2.40
2740 3115 4.272504 CGACATTCTTGTTTGGTGTACTGT 59.727 41.667 0.00 0.00 35.79 3.55
2741 3116 5.499139 ACATTCTTGTTTGGTGTACTGTG 57.501 39.130 0.00 0.00 29.55 3.66
2742 3117 4.947388 ACATTCTTGTTTGGTGTACTGTGT 59.053 37.500 0.00 0.00 29.55 3.72
2776 3151 7.201848 CCTTCAGTATGCCACATTTTGATATGT 60.202 37.037 0.00 0.00 35.99 2.29
2888 3263 4.521639 AGAACTGCTGCATTGATTGAGAAA 59.478 37.500 1.31 0.00 0.00 2.52
2904 3279 9.950680 TGATTGAGAAATTCTGTTTTCTAACAC 57.049 29.630 0.00 0.00 44.04 3.32
2914 3289 5.580691 TCTGTTTTCTAACACGCCTATGATG 59.419 40.000 0.00 0.00 39.29 3.07
2925 3300 3.195396 ACGCCTATGATGTTTTGCCATTT 59.805 39.130 0.00 0.00 0.00 2.32
2968 3343 1.680207 GCATCTCTTTGGGCCTTCATC 59.320 52.381 4.53 0.00 0.00 2.92
3035 3411 9.632638 AATAAACACTAAGGTAGAATGCATGAT 57.367 29.630 0.00 0.00 0.00 2.45
3036 3412 7.944729 AAACACTAAGGTAGAATGCATGATT 57.055 32.000 0.00 0.00 0.00 2.57
3037 3413 6.932356 ACACTAAGGTAGAATGCATGATTG 57.068 37.500 0.00 0.00 0.00 2.67
3038 3414 6.418101 ACACTAAGGTAGAATGCATGATTGT 58.582 36.000 0.00 0.00 0.00 2.71
3039 3415 6.317140 ACACTAAGGTAGAATGCATGATTGTG 59.683 38.462 0.00 3.43 0.00 3.33
3040 3416 6.317140 CACTAAGGTAGAATGCATGATTGTGT 59.683 38.462 0.00 0.00 0.00 3.72
3041 3417 6.886459 ACTAAGGTAGAATGCATGATTGTGTT 59.114 34.615 0.00 0.00 0.00 3.32
3042 3418 6.594788 AAGGTAGAATGCATGATTGTGTTT 57.405 33.333 0.00 0.00 0.00 2.83
3043 3419 5.957798 AGGTAGAATGCATGATTGTGTTTG 58.042 37.500 0.00 0.00 0.00 2.93
3044 3420 5.711506 AGGTAGAATGCATGATTGTGTTTGA 59.288 36.000 0.00 0.00 0.00 2.69
3045 3421 6.032094 GGTAGAATGCATGATTGTGTTTGAG 58.968 40.000 0.00 0.00 0.00 3.02
3046 3422 5.717078 AGAATGCATGATTGTGTTTGAGT 57.283 34.783 0.00 0.00 0.00 3.41
3047 3423 5.466819 AGAATGCATGATTGTGTTTGAGTG 58.533 37.500 0.00 0.00 0.00 3.51
3048 3424 4.859304 ATGCATGATTGTGTTTGAGTGT 57.141 36.364 0.00 0.00 0.00 3.55
3049 3425 4.652421 TGCATGATTGTGTTTGAGTGTT 57.348 36.364 0.00 0.00 0.00 3.32
3050 3426 5.008619 TGCATGATTGTGTTTGAGTGTTT 57.991 34.783 0.00 0.00 0.00 2.83
3051 3427 5.042593 TGCATGATTGTGTTTGAGTGTTTC 58.957 37.500 0.00 0.00 0.00 2.78
3052 3428 5.163530 TGCATGATTGTGTTTGAGTGTTTCT 60.164 36.000 0.00 0.00 0.00 2.52
3053 3429 6.039159 TGCATGATTGTGTTTGAGTGTTTCTA 59.961 34.615 0.00 0.00 0.00 2.10
3054 3430 7.086376 GCATGATTGTGTTTGAGTGTTTCTAT 58.914 34.615 0.00 0.00 0.00 1.98
3055 3431 7.596248 GCATGATTGTGTTTGAGTGTTTCTATT 59.404 33.333 0.00 0.00 0.00 1.73
3056 3432 9.121517 CATGATTGTGTTTGAGTGTTTCTATTC 57.878 33.333 0.00 0.00 0.00 1.75
3057 3433 7.648142 TGATTGTGTTTGAGTGTTTCTATTCC 58.352 34.615 0.00 0.00 0.00 3.01
3058 3434 5.666969 TGTGTTTGAGTGTTTCTATTCCG 57.333 39.130 0.00 0.00 0.00 4.30
3059 3435 5.361427 TGTGTTTGAGTGTTTCTATTCCGA 58.639 37.500 0.00 0.00 0.00 4.55
3060 3436 5.818336 TGTGTTTGAGTGTTTCTATTCCGAA 59.182 36.000 0.00 0.00 0.00 4.30
3061 3437 6.134061 GTGTTTGAGTGTTTCTATTCCGAAC 58.866 40.000 0.00 0.00 0.00 3.95
3062 3438 5.050634 TGTTTGAGTGTTTCTATTCCGAACG 60.051 40.000 0.00 0.00 0.00 3.95
3063 3439 4.247267 TGAGTGTTTCTATTCCGAACGT 57.753 40.909 0.00 0.00 0.00 3.99
3064 3440 5.375417 TGAGTGTTTCTATTCCGAACGTA 57.625 39.130 0.00 0.00 0.00 3.57
3065 3441 5.957798 TGAGTGTTTCTATTCCGAACGTAT 58.042 37.500 0.00 0.00 0.00 3.06
3066 3442 7.087409 TGAGTGTTTCTATTCCGAACGTATA 57.913 36.000 0.00 0.00 0.00 1.47
3067 3443 7.709947 TGAGTGTTTCTATTCCGAACGTATAT 58.290 34.615 0.00 0.00 0.00 0.86
3068 3444 7.646526 TGAGTGTTTCTATTCCGAACGTATATG 59.353 37.037 0.00 0.00 0.00 1.78
3069 3445 6.420008 AGTGTTTCTATTCCGAACGTATATGC 59.580 38.462 0.00 0.00 0.00 3.14
3070 3446 6.420008 GTGTTTCTATTCCGAACGTATATGCT 59.580 38.462 0.00 0.00 0.00 3.79
3071 3447 6.982141 TGTTTCTATTCCGAACGTATATGCTT 59.018 34.615 0.00 0.00 0.00 3.91
3072 3448 7.493320 TGTTTCTATTCCGAACGTATATGCTTT 59.507 33.333 0.00 0.00 0.00 3.51
3073 3449 8.971321 GTTTCTATTCCGAACGTATATGCTTTA 58.029 33.333 0.00 0.00 0.00 1.85
3074 3450 9.701098 TTTCTATTCCGAACGTATATGCTTTAT 57.299 29.630 0.00 0.00 0.00 1.40
3075 3451 9.701098 TTCTATTCCGAACGTATATGCTTTATT 57.299 29.630 0.00 0.00 0.00 1.40
3076 3452 9.135843 TCTATTCCGAACGTATATGCTTTATTG 57.864 33.333 0.00 0.00 0.00 1.90
3077 3453 7.956420 ATTCCGAACGTATATGCTTTATTGA 57.044 32.000 0.00 0.00 0.00 2.57
3078 3454 7.773864 TTCCGAACGTATATGCTTTATTGAA 57.226 32.000 0.00 0.00 0.00 2.69
3079 3455 7.169035 TCCGAACGTATATGCTTTATTGAAC 57.831 36.000 0.00 0.00 0.00 3.18
3080 3456 6.757478 TCCGAACGTATATGCTTTATTGAACA 59.243 34.615 0.00 0.00 0.00 3.18
3081 3457 6.844279 CCGAACGTATATGCTTTATTGAACAC 59.156 38.462 0.00 0.00 0.00 3.32
3082 3458 7.395645 CGAACGTATATGCTTTATTGAACACA 58.604 34.615 0.00 0.00 0.00 3.72
3083 3459 7.579093 CGAACGTATATGCTTTATTGAACACAG 59.421 37.037 0.00 0.00 0.00 3.66
3084 3460 8.487313 AACGTATATGCTTTATTGAACACAGA 57.513 30.769 0.00 0.00 0.00 3.41
3085 3461 8.662781 ACGTATATGCTTTATTGAACACAGAT 57.337 30.769 0.00 0.00 0.00 2.90
3086 3462 9.109393 ACGTATATGCTTTATTGAACACAGATT 57.891 29.630 0.00 0.00 0.00 2.40
3121 3497 9.740710 AACTAACAGCCTTTTATCTTATCTTGT 57.259 29.630 0.00 0.00 0.00 3.16
3122 3498 9.740710 ACTAACAGCCTTTTATCTTATCTTGTT 57.259 29.630 0.00 0.00 0.00 2.83
3158 3534 6.199937 AGGTAGAATGCATGATTGTGTTTC 57.800 37.500 0.00 0.00 0.00 2.78
3169 3545 6.403636 GCATGATTGTGTTTCTATTCCGAACT 60.404 38.462 0.00 0.00 0.00 3.01
3235 3615 7.809546 TGTTTTAAGTGTGAATGTATGACCA 57.190 32.000 0.00 0.00 0.00 4.02
3332 3712 6.699575 ACAGTTAGGGTTTGAATGATATGC 57.300 37.500 0.00 0.00 0.00 3.14
3353 3733 6.441093 TGCTTGCAACTTCTTAATCCTATG 57.559 37.500 0.00 0.00 0.00 2.23
3410 3790 3.430453 CATGTAGCCTTTTCCCCTCAAA 58.570 45.455 0.00 0.00 0.00 2.69
3417 3797 2.677914 CTTTTCCCCTCAAAAGTGGGT 58.322 47.619 0.00 0.00 41.82 4.51
3735 4115 8.190784 GGAATTGTTCACCAGGTATTTCAATAG 58.809 37.037 0.00 0.00 0.00 1.73
4024 4404 2.105993 TCTCTGATGCTATGCCTGCAAT 59.894 45.455 0.00 0.00 44.01 3.56
4033 4413 4.828387 TGCTATGCCTGCAATGATTTATGA 59.172 37.500 0.00 0.00 37.51 2.15
4050 4430 7.980662 TGATTTATGATTTATGTTTGTGGCCTG 59.019 33.333 3.32 0.00 0.00 4.85
4070 4450 1.821136 GTCTGGCATGAAAAAGAGGGG 59.179 52.381 0.00 0.00 0.00 4.79
4075 4455 1.827245 GCATGAAAAAGAGGGGGTGGT 60.827 52.381 0.00 0.00 0.00 4.16
4076 4456 1.895131 CATGAAAAAGAGGGGGTGGTG 59.105 52.381 0.00 0.00 0.00 4.17
4090 4478 0.254178 GTGGTGTGCTGGGATCATCT 59.746 55.000 0.00 0.00 0.00 2.90
4091 4479 0.253894 TGGTGTGCTGGGATCATCTG 59.746 55.000 0.00 0.00 0.00 2.90
4104 4492 5.662208 TGGGATCATCTGTTTATGCCAATTT 59.338 36.000 0.00 0.00 38.06 1.82
4201 4589 2.969628 AGCTGAGGAATGGAGTTACG 57.030 50.000 0.00 0.00 0.00 3.18
4287 4675 5.893500 TGTTGAATTTTATGGTACCCCTCA 58.106 37.500 10.07 0.00 0.00 3.86
4288 4676 6.498538 TGTTGAATTTTATGGTACCCCTCAT 58.501 36.000 10.07 0.00 0.00 2.90
4301 4689 2.322658 CCCCTCATATGCCATTGCTTT 58.677 47.619 0.00 0.00 38.71 3.51
4307 4695 6.463331 CCCTCATATGCCATTGCTTTGTAATT 60.463 38.462 0.00 0.00 38.71 1.40
4342 4730 9.701098 TTTCTTTTACGAGCTTCTCTAATGTTA 57.299 29.630 0.00 0.00 0.00 2.41
4352 4740 7.091443 AGCTTCTCTAATGTTACACACTACAC 58.909 38.462 0.00 0.00 0.00 2.90
4354 4742 7.384115 GCTTCTCTAATGTTACACACTACACAA 59.616 37.037 0.00 0.00 0.00 3.33
4356 4744 9.772973 TTCTCTAATGTTACACACTACACAATT 57.227 29.630 0.00 0.00 0.00 2.32
4357 4745 9.772973 TCTCTAATGTTACACACTACACAATTT 57.227 29.630 0.00 0.00 0.00 1.82
4404 4792 4.901849 TCACTTGCTGATAGGGCTACTATT 59.098 41.667 3.57 0.00 42.43 1.73
4458 4846 1.546029 GGTTTCTTCCCAGTTGATGCC 59.454 52.381 0.00 0.00 0.00 4.40
4576 4968 7.308229 GCATCTAGTTTTGACAGTCACATTCTT 60.308 37.037 1.52 0.00 0.00 2.52
4606 4998 3.312828 CATGATAGAGACTTACCTGCGC 58.687 50.000 0.00 0.00 0.00 6.09
4651 5043 7.620880 ACTACAAGCAGGTGATTTCATACTTA 58.379 34.615 0.00 0.00 0.00 2.24
4654 5046 7.989826 ACAAGCAGGTGATTTCATACTTAATC 58.010 34.615 0.00 0.00 0.00 1.75
4656 5048 8.680903 CAAGCAGGTGATTTCATACTTAATCTT 58.319 33.333 0.00 0.00 33.08 2.40
4826 5219 3.677190 CCAAAACGGTAATGTACCTGGA 58.323 45.455 0.00 0.00 46.81 3.86
4830 5223 5.431179 AAACGGTAATGTACCTGGAGAAT 57.569 39.130 0.00 0.00 46.81 2.40
4833 5226 4.141779 ACGGTAATGTACCTGGAGAATTCC 60.142 45.833 0.00 0.00 46.81 3.01
4852 5248 3.169908 TCCTATCCTTGGCATATGCGTA 58.830 45.455 21.04 10.20 43.26 4.42
4853 5249 3.195610 TCCTATCCTTGGCATATGCGTAG 59.804 47.826 21.04 18.49 43.26 3.51
4980 5376 5.335976 GGGTTCAAGGTAAGAATTTGCTCTG 60.336 44.000 0.00 0.00 0.00 3.35
4993 5389 6.425114 AGAATTTGCTCTGTATATTACGGCAG 59.575 38.462 0.00 0.00 34.63 4.85
5094 5494 9.460019 TGACATCCTATGAAAATACAATGTTGA 57.540 29.630 0.00 0.00 0.00 3.18
5109 5509 7.019774 ACAATGTTGATTAGATGATTGTCGG 57.980 36.000 0.00 0.00 30.11 4.79
5182 5584 6.781138 TCCGAAAATACATGTGCAAATAGTC 58.219 36.000 9.11 0.00 0.00 2.59
5187 5589 9.669353 GAAAATACATGTGCAAATAGTCCATAG 57.331 33.333 9.11 0.00 0.00 2.23
5191 5593 2.945008 TGTGCAAATAGTCCATAGCTGC 59.055 45.455 0.00 0.00 0.00 5.25
5198 5600 6.199719 GCAAATAGTCCATAGCTGCAAATTTC 59.800 38.462 1.02 0.00 0.00 2.17
5203 5605 4.640201 GTCCATAGCTGCAAATTTCCTGTA 59.360 41.667 1.02 0.00 0.00 2.74
5205 5607 4.202050 CCATAGCTGCAAATTTCCTGTACC 60.202 45.833 1.02 0.00 0.00 3.34
5212 5618 6.704050 GCTGCAAATTTCCTGTACCTTTTTAA 59.296 34.615 0.00 0.00 0.00 1.52
5214 5620 9.271828 CTGCAAATTTCCTGTACCTTTTTAATT 57.728 29.630 0.00 0.00 0.00 1.40
5215 5621 9.620259 TGCAAATTTCCTGTACCTTTTTAATTT 57.380 25.926 0.00 0.00 0.00 1.82
5220 5626 5.335261 TCCTGTACCTTTTTAATTTCCCCC 58.665 41.667 0.00 0.00 0.00 5.40
5246 5652 4.404073 CCCTTCTCTTATGCTCACTACACT 59.596 45.833 0.00 0.00 0.00 3.55
5287 5693 2.830370 CCCCAAGGAATCGCAGGC 60.830 66.667 0.00 0.00 33.47 4.85
5448 5854 0.178873 TGACCTAGGCCTGGAGGTTT 60.179 55.000 25.19 6.54 46.36 3.27
5469 5875 3.797039 TGTCTCACTGTCCTCAACTTTG 58.203 45.455 0.00 0.00 0.00 2.77
5473 5879 4.404394 TCTCACTGTCCTCAACTTTGTGTA 59.596 41.667 0.00 0.00 0.00 2.90
5531 5966 6.256053 AGGAACTCCATCATGTTGGTAATTT 58.744 36.000 19.92 10.37 38.01 1.82
5544 5979 3.666274 TGGTAATTTGTACCCTCGTGTG 58.334 45.455 0.21 0.00 36.79 3.82
5545 5980 2.417586 GGTAATTTGTACCCTCGTGTGC 59.582 50.000 0.00 0.00 0.00 4.57
5551 5986 0.168128 GTACCCTCGTGTGCAAATGC 59.832 55.000 0.00 0.00 42.50 3.56
5552 5987 0.036164 TACCCTCGTGTGCAAATGCT 59.964 50.000 6.97 0.00 42.66 3.79
5553 5988 1.210931 CCCTCGTGTGCAAATGCTG 59.789 57.895 6.97 0.00 42.66 4.41
5587 6026 5.182760 TGTTTGAAATTGTTGCAGCCTTTTT 59.817 32.000 0.00 0.00 0.00 1.94
5602 6041 7.014230 TGCAGCCTTTTTCTCTTATTACAAGTT 59.986 33.333 0.00 0.00 0.00 2.66
5622 6061 8.936864 ACAAGTTAAGTGTATGATTTAGTGCTC 58.063 33.333 0.00 0.00 0.00 4.26
5650 6089 9.733556 TTTCTCTGCCTATGTTCTGTTAATTTA 57.266 29.630 0.00 0.00 0.00 1.40
5663 6102 7.354751 TCTGTTAATTTAAGGTTGCCAACTT 57.645 32.000 7.62 0.00 0.00 2.66
5681 6120 6.206498 CCAACTTTTGCTCTAGTTTAACACC 58.794 40.000 0.00 0.00 32.50 4.16
5685 6124 6.094464 ACTTTTGCTCTAGTTTAACACCGTTT 59.906 34.615 0.00 0.00 0.00 3.60
5801 6240 6.669631 TCTCCAGACTAAAAGTTCCCTTTTT 58.330 36.000 5.82 0.00 46.27 1.94
5876 6315 4.333926 CAGAAGTATCTTAACCAGCTTGGC 59.666 45.833 2.50 0.00 35.56 4.52
5957 6396 1.207089 TCCGTAGCTGCTGCAATTACT 59.793 47.619 18.42 1.68 42.74 2.24
6010 6449 7.835822 TGAGAAAGGATTGAAAGTTGTGAAAA 58.164 30.769 0.00 0.00 0.00 2.29
6097 6536 1.435577 ATTTCGAAGGCCGTGTACAC 58.564 50.000 16.32 16.32 39.75 2.90
6179 6618 1.394917 GCACGGTAAGAGAACATGCAG 59.605 52.381 0.00 0.00 34.71 4.41
6299 6739 5.009631 TGGACTCACCAATACAATTTCTGG 58.990 41.667 0.00 0.00 46.75 3.86
6313 6753 2.040278 CTGGGTGAGAGGAGGGCT 59.960 66.667 0.00 0.00 0.00 5.19
6315 6755 2.366570 GGGTGAGAGGAGGGCTCT 59.633 66.667 0.00 0.00 33.57 4.09
6390 7040 6.374588 AGCCCTGATCTAAGCTAACTAGTTA 58.625 40.000 14.52 14.52 32.73 2.24
6507 7157 7.179160 CCCTCCTTATTCTTGTGATTTTCCTTT 59.821 37.037 0.00 0.00 0.00 3.11
6634 7284 3.607741 CACTGATGAGATTGCTGAGGTT 58.392 45.455 0.00 0.00 0.00 3.50
6637 7287 2.306805 TGATGAGATTGCTGAGGTTGGT 59.693 45.455 0.00 0.00 0.00 3.67
6649 7299 3.626930 TGAGGTTGGTACTGCAACTTTT 58.373 40.909 12.76 2.56 0.00 2.27
6939 7591 1.090052 GGCCTGTGAAGGATGCGTAC 61.090 60.000 0.00 0.00 0.00 3.67
7074 7726 2.615912 GGACTTCAACTCATATGGCAGC 59.384 50.000 2.13 0.00 0.00 5.25
7271 7925 5.119931 TGGTTTTCAGTGATGCAACATAC 57.880 39.130 0.00 0.00 0.00 2.39
7272 7926 4.826733 TGGTTTTCAGTGATGCAACATACT 59.173 37.500 0.00 0.00 0.00 2.12
7273 7927 5.048782 TGGTTTTCAGTGATGCAACATACTC 60.049 40.000 0.00 0.00 0.00 2.59
7274 7928 5.393962 GTTTTCAGTGATGCAACATACTCC 58.606 41.667 0.00 0.00 0.00 3.85
7275 7929 4.558226 TTCAGTGATGCAACATACTCCT 57.442 40.909 0.00 0.00 0.00 3.69
7276 7930 5.675684 TTCAGTGATGCAACATACTCCTA 57.324 39.130 0.00 0.00 0.00 2.94
7837 8493 8.218338 ACTATCAATGGTGATTTCTGATGTTC 57.782 34.615 0.00 0.00 42.03 3.18
7845 8501 7.147312 TGGTGATTTCTGATGTTCAAATTGTC 58.853 34.615 0.00 0.00 0.00 3.18
8019 8675 2.770232 AGGAGTACCCCCTCAAATAACG 59.230 50.000 0.00 0.00 36.73 3.18
8031 8687 4.500837 CCTCAAATAACGTCTGAGATGTCG 59.499 45.833 7.91 0.00 39.15 4.35
8086 8742 3.490078 CGCTAGGTTTTTGTTTGAAGGCA 60.490 43.478 0.00 0.00 0.00 4.75
8087 8743 3.802139 GCTAGGTTTTTGTTTGAAGGCAC 59.198 43.478 0.00 0.00 0.00 5.01
8158 8814 5.456548 TGTAACGGTCTATGAACACTGAA 57.543 39.130 0.00 0.00 0.00 3.02
8195 8851 6.484364 AAGGAATGTCCACATTGTTTTCTT 57.516 33.333 9.69 3.65 45.72 2.52
8196 8852 7.521423 CGAAGGAATGTCCACATTGTTTTCTTA 60.521 37.037 9.69 0.00 45.72 2.10
8197 8853 6.981722 AGGAATGTCCACATTGTTTTCTTAC 58.018 36.000 9.69 0.00 45.72 2.34
8198 8854 6.777580 AGGAATGTCCACATTGTTTTCTTACT 59.222 34.615 9.69 0.00 45.72 2.24
8199 8855 7.287696 AGGAATGTCCACATTGTTTTCTTACTT 59.712 33.333 9.69 0.00 45.72 2.24
8200 8856 7.595130 GGAATGTCCACATTGTTTTCTTACTTC 59.405 37.037 9.69 0.00 45.72 3.01
8201 8857 7.823745 ATGTCCACATTGTTTTCTTACTTCT 57.176 32.000 0.00 0.00 31.37 2.85
8202 8858 7.026631 TGTCCACATTGTTTTCTTACTTCTG 57.973 36.000 0.00 0.00 0.00 3.02
8203 8859 6.039270 TGTCCACATTGTTTTCTTACTTCTGG 59.961 38.462 0.00 0.00 0.00 3.86
8204 8860 6.039382 GTCCACATTGTTTTCTTACTTCTGGT 59.961 38.462 0.00 0.00 0.00 4.00
8205 8861 6.605594 TCCACATTGTTTTCTTACTTCTGGTT 59.394 34.615 0.00 0.00 0.00 3.67
8206 8862 6.697019 CCACATTGTTTTCTTACTTCTGGTTG 59.303 38.462 0.00 0.00 0.00 3.77
8207 8863 7.257722 CACATTGTTTTCTTACTTCTGGTTGT 58.742 34.615 0.00 0.00 0.00 3.32
8208 8864 7.759433 CACATTGTTTTCTTACTTCTGGTTGTT 59.241 33.333 0.00 0.00 0.00 2.83
8209 8865 8.311109 ACATTGTTTTCTTACTTCTGGTTGTTT 58.689 29.630 0.00 0.00 0.00 2.83
8210 8866 9.150348 CATTGTTTTCTTACTTCTGGTTGTTTT 57.850 29.630 0.00 0.00 0.00 2.43
8211 8867 9.719355 ATTGTTTTCTTACTTCTGGTTGTTTTT 57.281 25.926 0.00 0.00 0.00 1.94
8242 8898 8.788806 ACGTCTATTGTTTTAATTCCATGAACA 58.211 29.630 0.00 0.00 0.00 3.18
8243 8899 9.277565 CGTCTATTGTTTTAATTCCATGAACAG 57.722 33.333 0.00 0.00 32.50 3.16
8249 8905 7.802738 TGTTTTAATTCCATGAACAGTAGACG 58.197 34.615 0.00 0.00 0.00 4.18
8250 8906 7.442969 TGTTTTAATTCCATGAACAGTAGACGT 59.557 33.333 0.00 0.00 0.00 4.34
8251 8907 8.928733 GTTTTAATTCCATGAACAGTAGACGTA 58.071 33.333 0.00 0.00 0.00 3.57
8252 8908 9.661563 TTTTAATTCCATGAACAGTAGACGTAT 57.338 29.630 0.00 0.00 0.00 3.06
8253 8909 8.867112 TTAATTCCATGAACAGTAGACGTATC 57.133 34.615 0.00 0.00 0.00 2.24
8254 8910 5.907866 TTCCATGAACAGTAGACGTATCA 57.092 39.130 0.00 0.00 0.00 2.15
8255 8911 6.465439 TTCCATGAACAGTAGACGTATCAT 57.535 37.500 0.00 0.00 0.00 2.45
8256 8912 6.465439 TCCATGAACAGTAGACGTATCATT 57.535 37.500 0.00 0.00 0.00 2.57
8257 8913 6.504398 TCCATGAACAGTAGACGTATCATTC 58.496 40.000 0.00 0.00 0.00 2.67
8258 8914 6.321435 TCCATGAACAGTAGACGTATCATTCT 59.679 38.462 0.00 0.00 0.00 2.40
8259 8915 6.419116 CCATGAACAGTAGACGTATCATTCTG 59.581 42.308 0.00 0.00 0.00 3.02
8260 8916 5.891451 TGAACAGTAGACGTATCATTCTGG 58.109 41.667 0.00 0.00 0.00 3.86
8261 8917 4.920640 ACAGTAGACGTATCATTCTGGG 57.079 45.455 0.00 0.00 0.00 4.45
8262 8918 4.533815 ACAGTAGACGTATCATTCTGGGA 58.466 43.478 0.00 0.00 0.00 4.37
8263 8919 5.141182 ACAGTAGACGTATCATTCTGGGAT 58.859 41.667 0.00 0.00 0.00 3.85
8264 8920 5.598830 ACAGTAGACGTATCATTCTGGGATT 59.401 40.000 0.00 0.00 0.00 3.01
8265 8921 5.923114 CAGTAGACGTATCATTCTGGGATTG 59.077 44.000 0.00 0.00 0.00 2.67
8266 8922 5.833667 AGTAGACGTATCATTCTGGGATTGA 59.166 40.000 0.00 0.00 0.00 2.57
8267 8923 5.815233 AGACGTATCATTCTGGGATTGAT 57.185 39.130 0.00 9.03 36.82 2.57
8268 8924 5.545588 AGACGTATCATTCTGGGATTGATG 58.454 41.667 12.35 3.35 34.76 3.07
8269 8925 5.305386 AGACGTATCATTCTGGGATTGATGA 59.695 40.000 12.35 0.00 34.76 2.92
8270 8926 5.300752 ACGTATCATTCTGGGATTGATGAC 58.699 41.667 12.35 7.75 34.76 3.06
8271 8927 5.070981 ACGTATCATTCTGGGATTGATGACT 59.929 40.000 12.35 0.00 34.76 3.41
8272 8928 6.267699 ACGTATCATTCTGGGATTGATGACTA 59.732 38.462 12.35 0.00 34.76 2.59
8273 8929 6.810676 CGTATCATTCTGGGATTGATGACTAG 59.189 42.308 12.35 0.00 34.76 2.57
8274 8930 7.309438 CGTATCATTCTGGGATTGATGACTAGA 60.309 40.741 0.00 0.00 34.76 2.43
8275 8931 7.571071 ATCATTCTGGGATTGATGACTAGAT 57.429 36.000 0.00 0.00 33.31 1.98
8276 8932 7.384524 TCATTCTGGGATTGATGACTAGATT 57.615 36.000 0.00 0.00 0.00 2.40
8277 8933 7.448420 TCATTCTGGGATTGATGACTAGATTC 58.552 38.462 0.00 0.00 0.00 2.52
8366 9022 4.223032 AGATGTGTGGTTAAGGTAGTGGAG 59.777 45.833 0.00 0.00 0.00 3.86
8377 9033 8.674607 GGTTAAGGTAGTGGAGTTTCATTTATG 58.325 37.037 0.00 0.00 0.00 1.90
8429 9085 2.589890 CGTGTATACGGCCTTGCTC 58.410 57.895 3.80 0.00 46.23 4.26
8444 9100 2.640302 GCTCTCTGCGGAGGTGACA 61.640 63.158 22.38 1.57 39.86 3.58
8463 9119 5.064452 GTGACATTCTGGTGCAGATTAGAAG 59.936 44.000 0.00 0.00 40.39 2.85
8471 9127 4.081420 TGGTGCAGATTAGAAGAGGAGTTC 60.081 45.833 0.00 0.00 0.00 3.01
8512 9168 1.963515 GTTGGCCAGGTTCTTCAATGT 59.036 47.619 5.11 0.00 0.00 2.71
8567 9389 3.871006 GTGAACTGTGTGTGTGAGATGAA 59.129 43.478 0.00 0.00 0.00 2.57
8568 9390 4.512944 GTGAACTGTGTGTGTGAGATGAAT 59.487 41.667 0.00 0.00 0.00 2.57
8569 9391 5.696270 GTGAACTGTGTGTGTGAGATGAATA 59.304 40.000 0.00 0.00 0.00 1.75
8570 9392 6.202762 GTGAACTGTGTGTGTGAGATGAATAA 59.797 38.462 0.00 0.00 0.00 1.40
8571 9393 6.765512 TGAACTGTGTGTGTGAGATGAATAAA 59.234 34.615 0.00 0.00 0.00 1.40
8573 9395 8.846943 AACTGTGTGTGTGAGATGAATAAATA 57.153 30.769 0.00 0.00 0.00 1.40
8574 9396 9.453572 AACTGTGTGTGTGAGATGAATAAATAT 57.546 29.630 0.00 0.00 0.00 1.28
8576 9434 8.437360 TGTGTGTGTGAGATGAATAAATATCC 57.563 34.615 0.00 0.00 0.00 2.59
8698 9700 9.269453 GATTAATTAGTGTAAGTATTTCGGCCT 57.731 33.333 0.00 0.00 0.00 5.19
8731 9733 6.266168 TCAGTTCAAAAGCAAAGTGAAAGA 57.734 33.333 0.00 0.00 33.14 2.52
8736 9738 6.130298 TCAAAAGCAAAGTGAAAGATTCGA 57.870 33.333 0.00 0.00 0.00 3.71
8766 9802 8.304596 TGTTAGTCCTGATCCTTAATTATAGCG 58.695 37.037 0.00 0.00 0.00 4.26
8920 9960 5.060940 GCAAGTATTTCGGCTCAAAATGTTC 59.939 40.000 0.00 0.00 0.00 3.18
8922 9962 4.764823 AGTATTTCGGCTCAAAATGTTCCA 59.235 37.500 0.00 0.00 0.00 3.53
8923 9963 4.599047 ATTTCGGCTCAAAATGTTCCAA 57.401 36.364 0.00 0.00 0.00 3.53
8924 9964 3.363341 TTCGGCTCAAAATGTTCCAAC 57.637 42.857 0.00 0.00 0.00 3.77
8926 9966 2.552315 TCGGCTCAAAATGTTCCAACTC 59.448 45.455 0.00 0.00 0.00 3.01
8927 9967 2.293122 CGGCTCAAAATGTTCCAACTCA 59.707 45.455 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 0.249238 GCTACTCCATCCGTGAGCAG 60.249 60.000 0.00 0.00 32.98 4.24
57 58 0.528684 GTGCTACTCCATCCGTGAGC 60.529 60.000 0.00 0.00 32.98 4.26
58 59 1.107114 AGTGCTACTCCATCCGTGAG 58.893 55.000 0.00 0.00 35.92 3.51
59 60 1.557099 AAGTGCTACTCCATCCGTGA 58.443 50.000 0.00 0.00 0.00 4.35
60 61 3.735237 ATAAGTGCTACTCCATCCGTG 57.265 47.619 0.00 0.00 0.00 4.94
61 62 4.038883 GGTTATAAGTGCTACTCCATCCGT 59.961 45.833 0.00 0.00 0.00 4.69
62 63 4.038763 TGGTTATAAGTGCTACTCCATCCG 59.961 45.833 0.00 0.00 0.00 4.18
63 64 5.546621 TGGTTATAAGTGCTACTCCATCC 57.453 43.478 0.00 0.00 0.00 3.51
64 65 9.726438 AATTATGGTTATAAGTGCTACTCCATC 57.274 33.333 3.89 0.00 36.17 3.51
85 91 4.814234 TCGCTTGCGTCCTTCATTAATTAT 59.186 37.500 14.70 0.00 0.00 1.28
89 95 1.999735 CTCGCTTGCGTCCTTCATTAA 59.000 47.619 14.70 0.00 0.00 1.40
116 122 1.202245 ACGTTGTTTTGTTGAGCGCAT 60.202 42.857 11.47 0.00 0.00 4.73
130 136 7.915293 TTCCTGATTTTATCATACACGTTGT 57.085 32.000 0.00 0.00 38.85 3.32
159 165 8.857694 TCTCGGTTGATTTAATCTTAAAACCT 57.142 30.769 17.17 0.00 36.35 3.50
216 239 3.021269 TCGTATATTCATGTCCACGGC 57.979 47.619 0.00 0.00 0.00 5.68
223 246 7.857734 TGTTGTGGAAATCGTATATTCATGT 57.142 32.000 0.00 0.00 0.00 3.21
239 262 3.006752 GGGAATGCTGAATTTGTTGTGGA 59.993 43.478 0.00 0.00 0.00 4.02
487 514 9.132521 CTTTTTATCAAGCTTCATAGGTGTTTG 57.867 33.333 0.00 0.00 31.15 2.93
496 523 8.743714 CCCTTAAGACTTTTTATCAAGCTTCAT 58.256 33.333 3.36 0.00 0.00 2.57
505 532 5.646793 AGAACCGCCCTTAAGACTTTTTATC 59.353 40.000 3.36 0.00 0.00 1.75
554 581 9.369904 CAGTTTTCTTTTTCAGATCCTCAAAAA 57.630 29.630 6.62 6.62 0.00 1.94
555 582 8.531146 ACAGTTTTCTTTTTCAGATCCTCAAAA 58.469 29.630 0.00 0.00 0.00 2.44
556 583 8.066612 ACAGTTTTCTTTTTCAGATCCTCAAA 57.933 30.769 0.00 0.00 0.00 2.69
557 584 7.645058 ACAGTTTTCTTTTTCAGATCCTCAA 57.355 32.000 0.00 0.00 0.00 3.02
558 585 7.122650 ACAACAGTTTTCTTTTTCAGATCCTCA 59.877 33.333 0.00 0.00 0.00 3.86
559 586 7.433425 CACAACAGTTTTCTTTTTCAGATCCTC 59.567 37.037 0.00 0.00 0.00 3.71
560 587 7.122650 TCACAACAGTTTTCTTTTTCAGATCCT 59.877 33.333 0.00 0.00 0.00 3.24
561 588 7.257722 TCACAACAGTTTTCTTTTTCAGATCC 58.742 34.615 0.00 0.00 0.00 3.36
562 589 8.587111 GTTCACAACAGTTTTCTTTTTCAGATC 58.413 33.333 0.00 0.00 0.00 2.75
563 590 7.545615 GGTTCACAACAGTTTTCTTTTTCAGAT 59.454 33.333 0.00 0.00 0.00 2.90
564 591 6.866248 GGTTCACAACAGTTTTCTTTTTCAGA 59.134 34.615 0.00 0.00 0.00 3.27
565 592 6.183359 CGGTTCACAACAGTTTTCTTTTTCAG 60.183 38.462 0.00 0.00 0.00 3.02
566 593 5.631512 CGGTTCACAACAGTTTTCTTTTTCA 59.368 36.000 0.00 0.00 0.00 2.69
567 594 5.061684 CCGGTTCACAACAGTTTTCTTTTTC 59.938 40.000 0.00 0.00 0.00 2.29
568 595 4.926832 CCGGTTCACAACAGTTTTCTTTTT 59.073 37.500 0.00 0.00 0.00 1.94
569 596 4.021807 ACCGGTTCACAACAGTTTTCTTTT 60.022 37.500 0.00 0.00 0.00 2.27
570 597 3.508402 ACCGGTTCACAACAGTTTTCTTT 59.492 39.130 0.00 0.00 0.00 2.52
571 598 3.086282 ACCGGTTCACAACAGTTTTCTT 58.914 40.909 0.00 0.00 0.00 2.52
572 599 2.718563 ACCGGTTCACAACAGTTTTCT 58.281 42.857 0.00 0.00 0.00 2.52
573 600 4.594136 CTTACCGGTTCACAACAGTTTTC 58.406 43.478 15.04 0.00 0.00 2.29
574 601 3.181494 GCTTACCGGTTCACAACAGTTTT 60.181 43.478 15.04 0.00 0.00 2.43
575 602 2.356695 GCTTACCGGTTCACAACAGTTT 59.643 45.455 15.04 0.00 0.00 2.66
576 603 1.944709 GCTTACCGGTTCACAACAGTT 59.055 47.619 15.04 0.00 0.00 3.16
577 604 1.134340 TGCTTACCGGTTCACAACAGT 60.134 47.619 15.04 0.00 0.00 3.55
719 752 3.613689 GGGAGTATCGGGACCGGC 61.614 72.222 11.27 0.00 40.25 6.13
755 788 4.986708 TTGGAGCCGGGGCAAACC 62.987 66.667 12.97 12.19 44.88 3.27
785 818 3.237628 GCAGCGGATGTCTTTTCTTTTC 58.762 45.455 0.00 0.00 0.00 2.29
786 819 2.029918 GGCAGCGGATGTCTTTTCTTTT 60.030 45.455 0.00 0.00 0.00 2.27
788 821 1.168714 GGCAGCGGATGTCTTTTCTT 58.831 50.000 0.00 0.00 0.00 2.52
789 822 0.678048 GGGCAGCGGATGTCTTTTCT 60.678 55.000 0.00 0.00 32.55 2.52
790 823 1.657751 GGGGCAGCGGATGTCTTTTC 61.658 60.000 0.00 0.00 32.55 2.29
791 824 1.678970 GGGGCAGCGGATGTCTTTT 60.679 57.895 0.00 0.00 32.55 2.27
792 825 2.044946 GGGGCAGCGGATGTCTTT 60.045 61.111 0.00 0.00 32.55 2.52
793 826 4.115199 GGGGGCAGCGGATGTCTT 62.115 66.667 0.00 0.00 32.55 3.01
1337 1693 2.124487 AGAGGAGAGGGCGAGACG 60.124 66.667 0.00 0.00 0.00 4.18
1338 1694 2.184167 CGAGAGGAGAGGGCGAGAC 61.184 68.421 0.00 0.00 0.00 3.36
1339 1695 2.190843 CGAGAGGAGAGGGCGAGA 59.809 66.667 0.00 0.00 0.00 4.04
1340 1696 2.668185 TAGCGAGAGGAGAGGGCGAG 62.668 65.000 0.00 0.00 0.00 5.03
1341 1697 2.266816 TTAGCGAGAGGAGAGGGCGA 62.267 60.000 0.00 0.00 0.00 5.54
1342 1698 1.824329 TTAGCGAGAGGAGAGGGCG 60.824 63.158 0.00 0.00 0.00 6.13
1343 1699 1.737201 GTTAGCGAGAGGAGAGGGC 59.263 63.158 0.00 0.00 0.00 5.19
1367 1723 5.576447 AACAAACGAACAAACAGAAGGAT 57.424 34.783 0.00 0.00 0.00 3.24
1371 1727 3.604627 GCGAAACAAACGAACAAACAGAA 59.395 39.130 0.00 0.00 0.00 3.02
1454 1818 2.094649 GCTGTAGTACTTGCCGAAGTCT 60.095 50.000 0.00 0.00 41.75 3.24
1526 1890 3.429085 CACAATAGCAGACGAAAATGGC 58.571 45.455 0.00 0.00 0.00 4.40
1562 1926 2.353208 GGCTAGGAATCAGACCGCATAG 60.353 54.545 0.00 0.00 0.00 2.23
1642 2007 1.433534 GGCAACAGAGAGACCGAAAG 58.566 55.000 0.00 0.00 0.00 2.62
1646 2011 2.771763 AAGCGGCAACAGAGAGACCG 62.772 60.000 1.45 0.00 46.50 4.79
1651 2016 1.785041 GCAACAAGCGGCAACAGAGA 61.785 55.000 1.45 0.00 0.00 3.10
1670 2035 1.605058 AATCCACCCACTCCGACTCG 61.605 60.000 0.00 0.00 0.00 4.18
1675 2040 0.881118 CAAACAATCCACCCACTCCG 59.119 55.000 0.00 0.00 0.00 4.63
1678 2043 2.091333 AGAACCAAACAATCCACCCACT 60.091 45.455 0.00 0.00 0.00 4.00
1683 2048 2.029918 GCTGGAGAACCAAACAATCCAC 60.030 50.000 0.00 0.00 46.32 4.02
1686 2051 2.151202 TCGCTGGAGAACCAAACAATC 58.849 47.619 0.00 0.00 46.32 2.67
1695 2060 0.179134 ACTACGCATCGCTGGAGAAC 60.179 55.000 0.00 0.00 0.00 3.01
1713 2080 3.699038 ACAAGGAGCAGATCAGAGACTAC 59.301 47.826 0.00 0.00 0.00 2.73
1717 2084 2.235650 CCAACAAGGAGCAGATCAGAGA 59.764 50.000 0.00 0.00 41.22 3.10
1746 2113 4.937015 GCAGCCAAAATTCACCAACATTAT 59.063 37.500 0.00 0.00 0.00 1.28
1850 2220 8.875803 GGTAATTCACATAATTCGGCGATATAA 58.124 33.333 11.76 0.00 0.00 0.98
1859 2229 9.106286 CAAATCATCGGTAATTCACATAATTCG 57.894 33.333 0.00 0.00 0.00 3.34
1874 2244 2.239654 AGTGATGGGTCAAATCATCGGT 59.760 45.455 0.00 0.00 41.78 4.69
1901 2271 5.334421 AGTAGGGTAGCCGATCTGATAAAT 58.666 41.667 5.06 0.00 0.00 1.40
2058 2428 3.582164 GATCAATACCTGGAGGAGGACT 58.418 50.000 0.00 0.00 46.33 3.85
2183 2556 5.074515 GGGACCTCCATTTCCAATATTCCTA 59.925 44.000 0.00 0.00 37.91 2.94
2360 2733 5.359756 TGGAAGAAGAATATGTGATGACGG 58.640 41.667 0.00 0.00 0.00 4.79
2459 2832 5.134202 TCTCAGCAGAAACGTATCAGAAA 57.866 39.130 0.00 0.00 0.00 2.52
2631 3004 7.219484 ACTCACCAGAGGATTAATTTTGTTG 57.781 36.000 0.00 0.00 46.44 3.33
2669 3042 7.676683 AGAAAGGAGATAGTAAATGTAGCCA 57.323 36.000 0.00 0.00 0.00 4.75
2717 3091 4.272504 ACAGTACACCAAACAAGAATGTCG 59.727 41.667 0.00 0.00 39.40 4.35
2725 3100 3.945346 AGTCACACAGTACACCAAACAA 58.055 40.909 0.00 0.00 0.00 2.83
2731 3106 4.803098 AGGATAAGTCACACAGTACACC 57.197 45.455 0.00 0.00 0.00 4.16
2740 3115 4.469586 TGGCATACTGAAGGATAAGTCACA 59.530 41.667 0.00 0.00 0.00 3.58
2741 3116 4.811557 GTGGCATACTGAAGGATAAGTCAC 59.188 45.833 0.00 0.00 0.00 3.67
2742 3117 4.469586 TGTGGCATACTGAAGGATAAGTCA 59.530 41.667 0.00 0.00 0.00 3.41
2776 3151 7.229106 TCACTTGATGATTCTTTTGTCACATCA 59.771 33.333 0.00 0.00 41.05 3.07
2782 3157 6.005583 TGCTCACTTGATGATTCTTTTGTC 57.994 37.500 0.00 0.00 36.48 3.18
2849 3224 9.208022 GCAGCAGTTCTTACAACATATATATGA 57.792 33.333 26.05 3.97 37.15 2.15
2851 3226 9.730705 ATGCAGCAGTTCTTACAACATATATAT 57.269 29.630 0.00 0.00 0.00 0.86
2852 3227 9.559732 AATGCAGCAGTTCTTACAACATATATA 57.440 29.630 0.00 0.00 0.00 0.86
2888 3263 6.170506 TCATAGGCGTGTTAGAAAACAGAAT 58.829 36.000 0.00 0.00 46.06 2.40
2904 3279 3.441496 AATGGCAAAACATCATAGGCG 57.559 42.857 0.00 0.00 0.00 5.52
2914 3289 6.039616 TCAAGAACAGTGTAAATGGCAAAAC 58.960 36.000 0.00 0.00 35.33 2.43
2925 3300 7.386059 TGCTATGAGAAATCAAGAACAGTGTA 58.614 34.615 0.00 0.00 0.00 2.90
3012 3388 7.394359 ACAATCATGCATTCTACCTTAGTGTTT 59.606 33.333 0.00 0.00 0.00 2.83
3015 3391 6.317140 ACACAATCATGCATTCTACCTTAGTG 59.683 38.462 0.00 0.00 0.00 2.74
3016 3392 6.418101 ACACAATCATGCATTCTACCTTAGT 58.582 36.000 0.00 0.00 0.00 2.24
3017 3393 6.932356 ACACAATCATGCATTCTACCTTAG 57.068 37.500 0.00 0.00 0.00 2.18
3018 3394 7.392953 TCAAACACAATCATGCATTCTACCTTA 59.607 33.333 0.00 0.00 0.00 2.69
3019 3395 6.209192 TCAAACACAATCATGCATTCTACCTT 59.791 34.615 0.00 0.00 0.00 3.50
3020 3396 5.711506 TCAAACACAATCATGCATTCTACCT 59.288 36.000 0.00 0.00 0.00 3.08
3021 3397 5.953183 TCAAACACAATCATGCATTCTACC 58.047 37.500 0.00 0.00 0.00 3.18
3022 3398 6.525628 CACTCAAACACAATCATGCATTCTAC 59.474 38.462 0.00 0.00 0.00 2.59
3023 3399 6.207221 ACACTCAAACACAATCATGCATTCTA 59.793 34.615 0.00 0.00 0.00 2.10
3024 3400 5.010314 ACACTCAAACACAATCATGCATTCT 59.990 36.000 0.00 0.00 0.00 2.40
3025 3401 5.224888 ACACTCAAACACAATCATGCATTC 58.775 37.500 0.00 0.00 0.00 2.67
3026 3402 5.204409 ACACTCAAACACAATCATGCATT 57.796 34.783 0.00 0.00 0.00 3.56
3027 3403 4.859304 ACACTCAAACACAATCATGCAT 57.141 36.364 0.00 0.00 0.00 3.96
3028 3404 4.652421 AACACTCAAACACAATCATGCA 57.348 36.364 0.00 0.00 0.00 3.96
3029 3405 5.284079 AGAAACACTCAAACACAATCATGC 58.716 37.500 0.00 0.00 0.00 4.06
3030 3406 9.121517 GAATAGAAACACTCAAACACAATCATG 57.878 33.333 0.00 0.00 0.00 3.07
3031 3407 8.299570 GGAATAGAAACACTCAAACACAATCAT 58.700 33.333 0.00 0.00 0.00 2.45
3032 3408 7.519809 CGGAATAGAAACACTCAAACACAATCA 60.520 37.037 0.00 0.00 0.00 2.57
3033 3409 6.797033 CGGAATAGAAACACTCAAACACAATC 59.203 38.462 0.00 0.00 0.00 2.67
3034 3410 6.485313 TCGGAATAGAAACACTCAAACACAAT 59.515 34.615 0.00 0.00 0.00 2.71
3035 3411 5.818336 TCGGAATAGAAACACTCAAACACAA 59.182 36.000 0.00 0.00 0.00 3.33
3036 3412 5.361427 TCGGAATAGAAACACTCAAACACA 58.639 37.500 0.00 0.00 0.00 3.72
3037 3413 5.917541 TCGGAATAGAAACACTCAAACAC 57.082 39.130 0.00 0.00 0.00 3.32
3038 3414 5.050634 CGTTCGGAATAGAAACACTCAAACA 60.051 40.000 0.00 0.00 0.00 2.83
3039 3415 5.050567 ACGTTCGGAATAGAAACACTCAAAC 60.051 40.000 0.00 0.00 0.00 2.93
3040 3416 5.051816 ACGTTCGGAATAGAAACACTCAAA 58.948 37.500 0.00 0.00 0.00 2.69
3041 3417 4.624015 ACGTTCGGAATAGAAACACTCAA 58.376 39.130 0.00 0.00 0.00 3.02
3042 3418 4.247267 ACGTTCGGAATAGAAACACTCA 57.753 40.909 0.00 0.00 0.00 3.41
3043 3419 7.358187 GCATATACGTTCGGAATAGAAACACTC 60.358 40.741 0.00 0.00 0.00 3.51
3044 3420 6.420008 GCATATACGTTCGGAATAGAAACACT 59.580 38.462 0.00 0.00 0.00 3.55
3045 3421 6.420008 AGCATATACGTTCGGAATAGAAACAC 59.580 38.462 0.00 0.00 0.00 3.32
3046 3422 6.509656 AGCATATACGTTCGGAATAGAAACA 58.490 36.000 0.00 0.00 0.00 2.83
3047 3423 7.404139 AAGCATATACGTTCGGAATAGAAAC 57.596 36.000 0.00 0.00 0.00 2.78
3048 3424 9.701098 ATAAAGCATATACGTTCGGAATAGAAA 57.299 29.630 0.00 0.00 0.00 2.52
3049 3425 9.701098 AATAAAGCATATACGTTCGGAATAGAA 57.299 29.630 0.00 0.00 0.00 2.10
3050 3426 9.135843 CAATAAAGCATATACGTTCGGAATAGA 57.864 33.333 0.00 0.00 0.00 1.98
3051 3427 9.135843 TCAATAAAGCATATACGTTCGGAATAG 57.864 33.333 0.00 0.00 0.00 1.73
3052 3428 9.478768 TTCAATAAAGCATATACGTTCGGAATA 57.521 29.630 0.00 0.00 0.00 1.75
3053 3429 7.956420 TCAATAAAGCATATACGTTCGGAAT 57.044 32.000 0.00 0.00 0.00 3.01
3054 3430 7.278203 TGTTCAATAAAGCATATACGTTCGGAA 59.722 33.333 0.00 0.00 0.00 4.30
3055 3431 6.757478 TGTTCAATAAAGCATATACGTTCGGA 59.243 34.615 0.00 0.00 0.00 4.55
3056 3432 6.844279 GTGTTCAATAAAGCATATACGTTCGG 59.156 38.462 0.00 0.00 0.00 4.30
3057 3433 7.395645 TGTGTTCAATAAAGCATATACGTTCG 58.604 34.615 0.00 0.00 0.00 3.95
3058 3434 8.600625 TCTGTGTTCAATAAAGCATATACGTTC 58.399 33.333 0.00 0.00 0.00 3.95
3059 3435 8.487313 TCTGTGTTCAATAAAGCATATACGTT 57.513 30.769 0.00 0.00 0.00 3.99
3060 3436 8.662781 ATCTGTGTTCAATAAAGCATATACGT 57.337 30.769 0.00 0.00 0.00 3.57
3095 3471 9.740710 ACAAGATAAGATAAAAGGCTGTTAGTT 57.259 29.630 3.14 2.26 0.00 2.24
3096 3472 9.740710 AACAAGATAAGATAAAAGGCTGTTAGT 57.259 29.630 3.14 0.00 0.00 2.24
3124 3500 9.632638 ATCATGCATTCTACCTTAGTGTTTATT 57.367 29.630 0.00 0.00 0.00 1.40
3125 3501 9.632638 AATCATGCATTCTACCTTAGTGTTTAT 57.367 29.630 0.00 0.00 0.00 1.40
3126 3502 8.892723 CAATCATGCATTCTACCTTAGTGTTTA 58.107 33.333 0.00 0.00 0.00 2.01
3145 3521 7.076842 AGTTCGGAATAGAAACACAATCATG 57.923 36.000 0.00 0.00 0.00 3.07
3261 3641 8.212259 ACTGGAATTAGATGATATGCTAAGGT 57.788 34.615 0.00 0.00 30.86 3.50
3309 3689 6.426587 AGCATATCATTCAAACCCTAACTGT 58.573 36.000 0.00 0.00 0.00 3.55
3332 3712 8.273780 AGTTCATAGGATTAAGAAGTTGCAAG 57.726 34.615 0.00 0.00 0.00 4.01
3491 3871 2.193306 AGCAAAAGCACAAAGACACG 57.807 45.000 0.00 0.00 0.00 4.49
3798 4178 8.759641 CAGATATTCAAGATTCACCTAGAAACG 58.240 37.037 0.00 0.00 40.22 3.60
3999 4379 3.933955 GCAGGCATAGCATCAGAGATAAG 59.066 47.826 0.00 0.00 0.00 1.73
4011 4391 5.381174 TCATAAATCATTGCAGGCATAGC 57.619 39.130 0.00 0.00 0.00 2.97
4024 4404 7.980662 CAGGCCACAAACATAAATCATAAATCA 59.019 33.333 5.01 0.00 0.00 2.57
4033 4413 3.511146 CCAGACAGGCCACAAACATAAAT 59.489 43.478 5.01 0.00 0.00 1.40
4050 4430 1.821136 CCCCTCTTTTTCATGCCAGAC 59.179 52.381 0.00 0.00 0.00 3.51
4059 4439 1.328279 CACACCACCCCCTCTTTTTC 58.672 55.000 0.00 0.00 0.00 2.29
4070 4450 0.749454 GATGATCCCAGCACACCACC 60.749 60.000 0.00 0.00 0.00 4.61
4075 4455 2.885135 AAACAGATGATCCCAGCACA 57.115 45.000 0.00 0.00 0.00 4.57
4076 4456 3.004106 GCATAAACAGATGATCCCAGCAC 59.996 47.826 0.00 0.00 0.00 4.40
4090 4478 9.504708 AATCAATTCAGAAAATTGGCATAAACA 57.495 25.926 9.83 0.00 38.00 2.83
4091 4479 9.763465 CAATCAATTCAGAAAATTGGCATAAAC 57.237 29.630 9.83 0.00 38.00 2.01
4104 4492 6.016860 CAGAACAGACCACAATCAATTCAGAA 60.017 38.462 0.00 0.00 0.00 3.02
4201 4589 2.152016 GTTAGAACCAAGTCTGTGGCC 58.848 52.381 0.00 0.00 43.00 5.36
4287 4675 6.757947 GTGTGAATTACAAAGCAATGGCATAT 59.242 34.615 0.00 0.00 41.89 1.78
4288 4676 6.098679 GTGTGAATTACAAAGCAATGGCATA 58.901 36.000 0.00 0.00 41.89 3.14
4301 4689 5.508200 AAAAGAAAGCGGTGTGAATTACA 57.492 34.783 0.00 0.00 36.82 2.41
4307 4695 2.798283 CTCGTAAAAGAAAGCGGTGTGA 59.202 45.455 0.00 0.00 0.00 3.58
4342 4730 3.486383 CCCCTGAAATTGTGTAGTGTGT 58.514 45.455 0.00 0.00 0.00 3.72
4352 4740 2.424812 CCCATACCTCCCCCTGAAATTG 60.425 54.545 0.00 0.00 0.00 2.32
4354 4742 1.275595 ACCCATACCTCCCCCTGAAAT 60.276 52.381 0.00 0.00 0.00 2.17
4356 4744 0.623324 CACCCATACCTCCCCCTGAA 60.623 60.000 0.00 0.00 0.00 3.02
4357 4745 1.004230 CACCCATACCTCCCCCTGA 59.996 63.158 0.00 0.00 0.00 3.86
4404 4792 1.340088 ATTCTGGTGCCATGTTTGCA 58.660 45.000 0.00 0.00 36.12 4.08
4458 4846 3.686726 GCTTCAGGTAGTCCAATGTCTTG 59.313 47.826 0.00 0.00 35.89 3.02
4549 4940 3.740832 TGTGACTGTCAAAACTAGATGCG 59.259 43.478 12.81 0.00 0.00 4.73
4576 4968 3.928754 AGTCTCTATCATGGCCACCTAA 58.071 45.455 8.16 0.00 0.00 2.69
4606 4998 3.734231 AGTCGACGAACATATTATTGGCG 59.266 43.478 10.46 0.00 0.00 5.69
4654 5046 9.959749 AACACACACCAAACAACTTATAATAAG 57.040 29.630 0.00 0.00 0.00 1.73
4697 5089 9.678260 GGGAGAAGCATCATCAGTATTATAAAT 57.322 33.333 0.00 0.00 0.00 1.40
4701 5093 6.949117 AGGGAGAAGCATCATCAGTATTAT 57.051 37.500 0.00 0.00 0.00 1.28
4708 5100 3.201487 ACATCAAGGGAGAAGCATCATCA 59.799 43.478 0.00 0.00 0.00 3.07
4709 5101 3.818180 ACATCAAGGGAGAAGCATCATC 58.182 45.455 0.00 0.00 0.00 2.92
4710 5102 3.947612 ACATCAAGGGAGAAGCATCAT 57.052 42.857 0.00 0.00 0.00 2.45
4823 5216 3.122480 TGCCAAGGATAGGAATTCTCCA 58.878 45.455 13.17 0.00 45.24 3.86
4826 5219 5.259632 GCATATGCCAAGGATAGGAATTCT 58.740 41.667 17.26 0.00 34.31 2.40
4830 5223 2.371841 ACGCATATGCCAAGGATAGGAA 59.628 45.455 21.77 0.00 37.91 3.36
4833 5226 2.932614 GCTACGCATATGCCAAGGATAG 59.067 50.000 21.77 13.60 37.91 2.08
4993 5389 6.527057 AACACAGGAATACCAGTAGAGTAC 57.473 41.667 0.00 0.00 38.94 2.73
5004 5400 8.850156 AGATTATGGCAAATAACACAGGAATAC 58.150 33.333 0.00 0.00 0.00 1.89
5006 5402 7.902920 AGATTATGGCAAATAACACAGGAAT 57.097 32.000 0.00 0.00 0.00 3.01
5010 5406 8.761575 AAACAAGATTATGGCAAATAACACAG 57.238 30.769 0.00 0.00 0.00 3.66
5046 5445 8.493607 TGTCAAAGAATGATAACCATCCATCTA 58.506 33.333 0.00 0.00 40.97 1.98
5094 5494 8.522830 ACATTGTTTTTCCGACAATCATCTAAT 58.477 29.630 0.00 0.00 43.75 1.73
5158 5560 6.183360 GGACTATTTGCACATGTATTTTCGGA 60.183 38.462 0.00 0.00 0.00 4.55
5160 5562 6.550843 TGGACTATTTGCACATGTATTTTCG 58.449 36.000 0.00 0.00 0.00 3.46
5171 5573 2.945008 TGCAGCTATGGACTATTTGCAC 59.055 45.455 0.00 0.00 35.41 4.57
5182 5584 4.202050 GGTACAGGAAATTTGCAGCTATGG 60.202 45.833 12.54 0.00 0.00 2.74
5187 5589 3.942130 AAGGTACAGGAAATTTGCAGC 57.058 42.857 12.54 1.26 0.00 5.25
5198 5600 5.338632 AGGGGGAAATTAAAAAGGTACAGG 58.661 41.667 0.00 0.00 0.00 4.00
5203 5605 4.140301 AGGGAAGGGGGAAATTAAAAAGGT 60.140 41.667 0.00 0.00 0.00 3.50
5205 5607 5.785423 AGAAGGGAAGGGGGAAATTAAAAAG 59.215 40.000 0.00 0.00 0.00 2.27
5212 5618 2.385263 AGAGAAGGGAAGGGGGAAAT 57.615 50.000 0.00 0.00 0.00 2.17
5214 5620 3.123273 CATAAGAGAAGGGAAGGGGGAA 58.877 50.000 0.00 0.00 0.00 3.97
5215 5621 2.776665 CATAAGAGAAGGGAAGGGGGA 58.223 52.381 0.00 0.00 0.00 4.81
5220 5626 4.751767 AGTGAGCATAAGAGAAGGGAAG 57.248 45.455 0.00 0.00 0.00 3.46
5246 5652 1.134848 GCAAAACCCTGCACAGAAACA 60.135 47.619 0.00 0.00 42.17 2.83
5287 5693 5.205565 GGAACGAAAACTCAGCAACTTTAG 58.794 41.667 0.00 0.00 0.00 1.85
5448 5854 3.197766 ACAAAGTTGAGGACAGTGAGACA 59.802 43.478 0.00 0.00 0.00 3.41
5496 5902 7.179694 ACATGATGGAGTTCCTCAATTGAAATT 59.820 33.333 9.88 0.00 36.82 1.82
5497 5903 6.666546 ACATGATGGAGTTCCTCAATTGAAAT 59.333 34.615 9.88 0.00 36.82 2.17
5499 5905 5.573219 ACATGATGGAGTTCCTCAATTGAA 58.427 37.500 9.88 0.00 36.82 2.69
5500 5906 5.183530 ACATGATGGAGTTCCTCAATTGA 57.816 39.130 8.12 8.12 36.82 2.57
5501 5907 5.393787 CCAACATGATGGAGTTCCTCAATTG 60.394 44.000 16.73 0.00 43.54 2.32
5502 5908 4.708421 CCAACATGATGGAGTTCCTCAATT 59.292 41.667 16.73 0.00 43.54 2.32
5503 5909 4.264083 ACCAACATGATGGAGTTCCTCAAT 60.264 41.667 27.18 0.00 43.54 2.57
5531 5966 1.518325 CATTTGCACACGAGGGTACA 58.482 50.000 0.00 0.00 0.00 2.90
5545 5980 6.946165 TCAAACATTTTAACAGCAGCATTTG 58.054 32.000 0.00 0.00 0.00 2.32
5551 5986 9.212687 CAACAATTTCAAACATTTTAACAGCAG 57.787 29.630 0.00 0.00 0.00 4.24
5552 5987 7.695618 GCAACAATTTCAAACATTTTAACAGCA 59.304 29.630 0.00 0.00 0.00 4.41
5553 5988 7.695618 TGCAACAATTTCAAACATTTTAACAGC 59.304 29.630 0.00 0.00 0.00 4.40
5554 5989 9.212687 CTGCAACAATTTCAAACATTTTAACAG 57.787 29.630 0.00 0.00 0.00 3.16
5555 5990 7.695618 GCTGCAACAATTTCAAACATTTTAACA 59.304 29.630 0.00 0.00 0.00 2.41
5556 5991 7.165647 GGCTGCAACAATTTCAAACATTTTAAC 59.834 33.333 0.50 0.00 0.00 2.01
5557 5992 7.066766 AGGCTGCAACAATTTCAAACATTTTAA 59.933 29.630 0.50 0.00 0.00 1.52
5559 5994 5.357596 AGGCTGCAACAATTTCAAACATTTT 59.642 32.000 0.50 0.00 0.00 1.82
5561 5996 4.453751 AGGCTGCAACAATTTCAAACATT 58.546 34.783 0.50 0.00 0.00 2.71
5602 6041 8.540388 AGAAAGGAGCACTAAATCATACACTTA 58.460 33.333 0.00 0.00 0.00 2.24
5622 6061 4.213564 ACAGAACATAGGCAGAGAAAGG 57.786 45.455 0.00 0.00 0.00 3.11
5650 6089 2.110578 AGAGCAAAAGTTGGCAACCTT 58.889 42.857 25.81 17.27 0.00 3.50
5663 6102 5.354792 ACAAACGGTGTTAAACTAGAGCAAA 59.645 36.000 0.00 0.00 37.01 3.68
5681 6120 9.284594 CATGGTTTCACCTAATTAATACAAACG 57.715 33.333 0.00 0.00 39.58 3.60
5685 6124 9.707957 AATCCATGGTTTCACCTAATTAATACA 57.292 29.630 12.58 0.00 39.58 2.29
5801 6240 6.771934 AAAAATTAACCAAGGATCCCCAAA 57.228 33.333 8.55 0.00 33.88 3.28
5876 6315 5.360714 ACACCCATAGCCAACAATATTGAAG 59.639 40.000 22.16 12.63 0.00 3.02
5957 6396 4.082625 GCAATGTCAATCTCACCATTGTCA 60.083 41.667 11.49 0.00 43.72 3.58
6097 6536 0.171007 AATTTGCTCGGGTCAATGCG 59.829 50.000 0.00 0.00 0.00 4.73
6179 6618 4.507756 GCAGAGGTTTCAACATTGGAAAAC 59.492 41.667 0.00 0.00 41.22 2.43
6235 6675 7.473027 AAATGACAGCAATCTTTCTTTGTTG 57.527 32.000 0.00 0.00 40.05 3.33
6296 6736 2.040278 AGCCCTCCTCTCACCCAG 59.960 66.667 0.00 0.00 0.00 4.45
6348 6909 5.888161 CAGGGCTTAATCAATTCTACTGGTT 59.112 40.000 0.00 0.00 0.00 3.67
6353 6914 9.213799 CTTAGATCAGGGCTTAATCAATTCTAC 57.786 37.037 0.00 0.00 0.00 2.59
6356 6917 6.714356 AGCTTAGATCAGGGCTTAATCAATTC 59.286 38.462 0.00 0.00 0.00 2.17
6361 6922 6.764379 AGTTAGCTTAGATCAGGGCTTAATC 58.236 40.000 10.62 0.00 36.40 1.75
6390 7040 7.669722 TCACAAGAATATTTAGGCAGAAGGTTT 59.330 33.333 0.00 0.00 0.00 3.27
6429 7079 0.037326 CACCTTGCTTCCGCTAGTGA 60.037 55.000 4.44 0.00 37.31 3.41
6480 7130 5.163509 GGAAAATCACAAGAATAAGGAGGGC 60.164 44.000 0.00 0.00 0.00 5.19
6507 7157 1.543208 GCACATGGTCCACAGTTCAGA 60.543 52.381 0.00 0.00 0.00 3.27
6634 7284 6.518208 ACAAAAGTAAAAGTTGCAGTACCA 57.482 33.333 0.00 0.00 0.00 3.25
6939 7591 3.053455 GTCACCGAAGTTGAGAAGACAG 58.947 50.000 0.00 0.00 0.00 3.51
7074 7726 1.064296 CTCATCGTTCCCTCGTCGG 59.936 63.158 0.00 0.00 0.00 4.79
7271 7925 8.729805 AGATTTGAATGCTTTCTAAGTAGGAG 57.270 34.615 12.96 0.00 31.66 3.69
7272 7926 8.321353 TGAGATTTGAATGCTTTCTAAGTAGGA 58.679 33.333 12.96 0.00 31.66 2.94
7273 7927 8.498054 TGAGATTTGAATGCTTTCTAAGTAGG 57.502 34.615 12.96 0.00 31.66 3.18
7276 7930 9.017509 TCAATGAGATTTGAATGCTTTCTAAGT 57.982 29.630 12.96 4.44 32.82 2.24
7445 8099 2.365293 GCAAAGAAACAACAGGTGGGAT 59.635 45.455 0.00 0.00 0.00 3.85
7777 8433 6.376581 CCTAGACAAAATGCTCAGGAAAGAAT 59.623 38.462 0.00 0.00 0.00 2.40
7837 8493 5.574055 CACCTGAATGGAAATCGACAATTTG 59.426 40.000 0.00 0.00 37.70 2.32
8019 8675 1.098869 TCTCTGCCGACATCTCAGAC 58.901 55.000 0.00 0.00 33.72 3.51
8031 8687 3.502211 TCAAAATTTCCGAGTTCTCTGCC 59.498 43.478 0.00 0.00 0.00 4.85
8158 8814 0.984230 TTCCTTCGGCTGATTCCACT 59.016 50.000 0.00 0.00 0.00 4.00
8216 8872 8.788806 TGTTCATGGAATTAAAACAATAGACGT 58.211 29.630 0.00 0.00 0.00 4.34
8217 8873 9.277565 CTGTTCATGGAATTAAAACAATAGACG 57.722 33.333 0.00 0.00 30.16 4.18
8223 8879 8.286800 CGTCTACTGTTCATGGAATTAAAACAA 58.713 33.333 0.00 0.00 30.16 2.83
8224 8880 7.442969 ACGTCTACTGTTCATGGAATTAAAACA 59.557 33.333 0.00 0.00 0.00 2.83
8225 8881 7.803724 ACGTCTACTGTTCATGGAATTAAAAC 58.196 34.615 0.00 0.00 0.00 2.43
8226 8882 7.972832 ACGTCTACTGTTCATGGAATTAAAA 57.027 32.000 0.00 0.00 0.00 1.52
8227 8883 9.309516 GATACGTCTACTGTTCATGGAATTAAA 57.690 33.333 0.00 0.00 0.00 1.52
8228 8884 8.471609 TGATACGTCTACTGTTCATGGAATTAA 58.528 33.333 0.00 0.00 0.00 1.40
8229 8885 8.002984 TGATACGTCTACTGTTCATGGAATTA 57.997 34.615 0.00 0.00 0.00 1.40
8230 8886 6.873997 TGATACGTCTACTGTTCATGGAATT 58.126 36.000 0.00 0.00 0.00 2.17
8231 8887 6.465439 TGATACGTCTACTGTTCATGGAAT 57.535 37.500 0.00 0.00 0.00 3.01
8232 8888 5.907866 TGATACGTCTACTGTTCATGGAA 57.092 39.130 0.00 0.00 0.00 3.53
8233 8889 6.321435 AGAATGATACGTCTACTGTTCATGGA 59.679 38.462 0.00 0.00 0.00 3.41
8234 8890 6.419116 CAGAATGATACGTCTACTGTTCATGG 59.581 42.308 0.00 0.00 39.69 3.66
8235 8891 6.419116 CCAGAATGATACGTCTACTGTTCATG 59.581 42.308 0.00 0.00 39.69 3.07
8236 8892 6.461648 CCCAGAATGATACGTCTACTGTTCAT 60.462 42.308 0.00 0.00 39.69 2.57
8237 8893 5.163550 CCCAGAATGATACGTCTACTGTTCA 60.164 44.000 0.00 0.00 39.69 3.18
8238 8894 5.067413 TCCCAGAATGATACGTCTACTGTTC 59.933 44.000 0.00 0.00 39.69 3.18
8239 8895 4.954202 TCCCAGAATGATACGTCTACTGTT 59.046 41.667 0.00 0.00 39.69 3.16
8240 8896 4.533815 TCCCAGAATGATACGTCTACTGT 58.466 43.478 0.00 0.00 39.69 3.55
8241 8897 5.713792 ATCCCAGAATGATACGTCTACTG 57.286 43.478 0.00 0.00 39.69 2.74
8242 8898 5.833667 TCAATCCCAGAATGATACGTCTACT 59.166 40.000 0.00 0.00 39.69 2.57
8243 8899 6.085555 TCAATCCCAGAATGATACGTCTAC 57.914 41.667 0.00 0.00 39.69 2.59
8244 8900 6.493458 TCATCAATCCCAGAATGATACGTCTA 59.507 38.462 0.00 0.00 39.69 2.59
8245 8901 5.305386 TCATCAATCCCAGAATGATACGTCT 59.695 40.000 0.00 0.00 39.69 4.18
8246 8902 5.406780 GTCATCAATCCCAGAATGATACGTC 59.593 44.000 0.00 0.00 39.69 4.34
8247 8903 5.070981 AGTCATCAATCCCAGAATGATACGT 59.929 40.000 0.00 0.00 39.69 3.57
8248 8904 5.545588 AGTCATCAATCCCAGAATGATACG 58.454 41.667 0.00 0.00 39.69 3.06
8249 8905 7.901029 TCTAGTCATCAATCCCAGAATGATAC 58.099 38.462 0.00 0.00 39.69 2.24
8250 8906 8.676397 ATCTAGTCATCAATCCCAGAATGATA 57.324 34.615 0.00 0.00 39.69 2.15
8251 8907 7.571071 ATCTAGTCATCAATCCCAGAATGAT 57.429 36.000 0.00 0.00 39.69 2.45
8252 8908 7.384524 AATCTAGTCATCAATCCCAGAATGA 57.615 36.000 0.00 0.00 39.69 2.57
8253 8909 6.368243 CGAATCTAGTCATCAATCCCAGAATG 59.632 42.308 0.00 0.00 0.00 2.67
8254 8910 6.462500 CGAATCTAGTCATCAATCCCAGAAT 58.538 40.000 0.00 0.00 0.00 2.40
8255 8911 5.221521 CCGAATCTAGTCATCAATCCCAGAA 60.222 44.000 0.00 0.00 0.00 3.02
8256 8912 4.281941 CCGAATCTAGTCATCAATCCCAGA 59.718 45.833 0.00 0.00 0.00 3.86
8257 8913 4.281941 TCCGAATCTAGTCATCAATCCCAG 59.718 45.833 0.00 0.00 0.00 4.45
8258 8914 4.223144 TCCGAATCTAGTCATCAATCCCA 58.777 43.478 0.00 0.00 0.00 4.37
8259 8915 4.873746 TCCGAATCTAGTCATCAATCCC 57.126 45.455 0.00 0.00 0.00 3.85
8260 8916 4.688413 GCTTCCGAATCTAGTCATCAATCC 59.312 45.833 0.00 0.00 0.00 3.01
8261 8917 4.384247 CGCTTCCGAATCTAGTCATCAATC 59.616 45.833 0.00 0.00 36.29 2.67
8262 8918 4.302455 CGCTTCCGAATCTAGTCATCAAT 58.698 43.478 0.00 0.00 36.29 2.57
8263 8919 3.706698 CGCTTCCGAATCTAGTCATCAA 58.293 45.455 0.00 0.00 36.29 2.57
8264 8920 2.543861 GCGCTTCCGAATCTAGTCATCA 60.544 50.000 0.00 0.00 36.29 3.07
8265 8921 2.055100 GCGCTTCCGAATCTAGTCATC 58.945 52.381 0.00 0.00 36.29 2.92
8266 8922 1.409064 TGCGCTTCCGAATCTAGTCAT 59.591 47.619 9.73 0.00 36.29 3.06
8267 8923 0.815095 TGCGCTTCCGAATCTAGTCA 59.185 50.000 9.73 0.00 36.29 3.41
8268 8924 1.201343 GTGCGCTTCCGAATCTAGTC 58.799 55.000 9.73 0.00 36.29 2.59
8269 8925 0.818296 AGTGCGCTTCCGAATCTAGT 59.182 50.000 9.73 0.00 36.29 2.57
8270 8926 1.927895 AAGTGCGCTTCCGAATCTAG 58.072 50.000 9.73 0.00 36.29 2.43
8271 8927 2.380084 AAAGTGCGCTTCCGAATCTA 57.620 45.000 13.92 0.00 36.29 1.98
8272 8928 1.197721 CAAAAGTGCGCTTCCGAATCT 59.802 47.619 13.92 0.00 36.29 2.40
8273 8929 1.606606 CAAAAGTGCGCTTCCGAATC 58.393 50.000 13.92 0.00 36.29 2.52
8274 8930 0.240945 CCAAAAGTGCGCTTCCGAAT 59.759 50.000 13.92 0.00 36.29 3.34
8275 8931 1.652012 CCAAAAGTGCGCTTCCGAA 59.348 52.632 13.92 0.00 36.29 4.30
8276 8932 2.903547 GCCAAAAGTGCGCTTCCGA 61.904 57.895 13.92 0.00 36.29 4.55
8277 8933 2.429069 GCCAAAAGTGCGCTTCCG 60.429 61.111 13.92 7.29 33.01 4.30
8313 8969 1.732259 CCTGCACCGTCAAGATACAAC 59.268 52.381 0.00 0.00 0.00 3.32
8377 9033 8.084684 AGCCATCAAAGTTTCTTTACTGATTTC 58.915 33.333 0.00 0.00 0.00 2.17
8429 9085 0.534412 AGAATGTCACCTCCGCAGAG 59.466 55.000 0.00 0.00 40.09 3.35
8444 9100 4.718774 TCCTCTTCTAATCTGCACCAGAAT 59.281 41.667 0.00 0.00 44.04 2.40
8463 9119 2.101582 ACTATGCATGACCGAACTCCTC 59.898 50.000 10.16 0.00 0.00 3.71
8471 9127 5.991328 ACTTTCATTACTATGCATGACCG 57.009 39.130 10.16 0.00 0.00 4.79
8512 9168 2.096466 CACGTCAGCGCATTTACAGAAA 60.096 45.455 11.47 0.00 42.83 2.52
8546 9368 3.817709 TCATCTCACACACACAGTTCA 57.182 42.857 0.00 0.00 0.00 3.18
8567 9389 9.871175 ATTAACCCCGTAAAACAGGATATTTAT 57.129 29.630 0.00 0.00 0.00 1.40
8568 9390 9.341078 GATTAACCCCGTAAAACAGGATATTTA 57.659 33.333 0.00 0.00 0.00 1.40
8569 9391 7.286087 GGATTAACCCCGTAAAACAGGATATTT 59.714 37.037 0.00 0.00 0.00 1.40
8570 9392 6.774170 GGATTAACCCCGTAAAACAGGATATT 59.226 38.462 0.00 0.00 0.00 1.28
8571 9393 6.102174 AGGATTAACCCCGTAAAACAGGATAT 59.898 38.462 0.00 0.00 40.05 1.63
8573 9395 4.228895 AGGATTAACCCCGTAAAACAGGAT 59.771 41.667 0.00 0.00 40.05 3.24
8574 9396 3.588396 AGGATTAACCCCGTAAAACAGGA 59.412 43.478 0.00 0.00 40.05 3.86
8576 9434 3.619929 CGAGGATTAACCCCGTAAAACAG 59.380 47.826 0.00 0.00 40.05 3.16
8731 9733 5.129485 AGGATCAGGACTAACACATTCGAAT 59.871 40.000 4.39 4.39 0.00 3.34
8762 9798 8.752254 CACTAATTAATCGTCTCATTTTCGCTA 58.248 33.333 0.00 0.00 0.00 4.26
8766 9802 7.852945 CCTGCACTAATTAATCGTCTCATTTTC 59.147 37.037 0.00 0.00 0.00 2.29
8776 9812 5.331902 CCAAACACCTGCACTAATTAATCG 58.668 41.667 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.