Multiple sequence alignment - TraesCS5A01G504400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G504400 chr5A 100.000 3587 0 0 1 3587 670105866 670102280 0.000000e+00 6625.0
1 TraesCS5A01G504400 chr5A 80.432 1482 257 31 997 2463 640724643 640726106 0.000000e+00 1099.0
2 TraesCS5A01G504400 chr5A 97.985 397 8 0 25 421 245457037 245456641 0.000000e+00 689.0
3 TraesCS5A01G504400 chr5A 97.985 397 8 0 25 421 670116628 670116232 0.000000e+00 689.0
4 TraesCS5A01G504400 chr5A 97.512 402 10 0 20 421 431049247 431049648 0.000000e+00 688.0
5 TraesCS5A01G504400 chr5A 92.627 217 11 5 3113 3325 36013220 36013435 1.250000e-79 307.0
6 TraesCS5A01G504400 chr4D 94.892 2173 75 16 418 2586 488468242 488470382 0.000000e+00 3365.0
7 TraesCS5A01G504400 chr4D 79.836 1582 275 35 998 2566 479540651 479542201 0.000000e+00 1114.0
8 TraesCS5A01G504400 chr4D 80.269 446 82 6 1958 2400 479675513 479675071 7.420000e-87 331.0
9 TraesCS5A01G504400 chr4D 80.045 446 83 6 1958 2400 479636365 479635923 3.450000e-85 326.0
10 TraesCS5A01G504400 chr4D 80.402 398 72 6 1958 2352 479637822 479637428 7.530000e-77 298.0
11 TraesCS5A01G504400 chr4D 97.436 117 3 0 2491 2607 488470827 488470943 2.180000e-47 200.0
12 TraesCS5A01G504400 chr4D 82.805 221 25 5 2942 3149 10920780 10921000 6.120000e-43 185.0
13 TraesCS5A01G504400 chr4D 92.405 79 6 0 2637 2715 488470387 488470465 2.930000e-21 113.0
14 TraesCS5A01G504400 chr4B 96.058 1928 65 6 670 2591 624863295 624861373 0.000000e+00 3129.0
15 TraesCS5A01G504400 chr4B 79.585 1592 278 37 998 2574 606764705 606766264 0.000000e+00 1096.0
16 TraesCS5A01G504400 chr4B 80.225 445 84 4 1958 2400 606866763 606866321 7.420000e-87 331.0
17 TraesCS5A01G504400 chr4B 79.775 445 86 4 1958 2400 606827528 606827086 1.610000e-83 320.0
18 TraesCS5A01G504400 chr4B 79.372 446 86 6 1958 2400 606817509 606817067 3.480000e-80 309.0
19 TraesCS5A01G504400 chr4B 79.318 440 87 4 1958 2395 606908216 606907779 4.500000e-79 305.0
20 TraesCS5A01G504400 chr4B 91.878 197 13 3 3365 3561 624754581 624754388 4.560000e-69 272.0
21 TraesCS5A01G504400 chr4B 80.968 310 32 17 2536 2820 624755027 624754720 1.680000e-53 220.0
22 TraesCS5A01G504400 chr4B 94.737 95 4 1 2621 2715 624861383 624861290 2.890000e-31 147.0
23 TraesCS5A01G504400 chr4A 81.707 1547 240 37 1031 2566 632999836 632998322 0.000000e+00 1249.0
24 TraesCS5A01G504400 chr4A 81.654 1548 239 39 1031 2566 632989722 632991236 0.000000e+00 1243.0
25 TraesCS5A01G504400 chr4A 80.038 1598 273 38 991 2574 685834791 685836356 0.000000e+00 1142.0
26 TraesCS5A01G504400 chr4A 97.761 402 9 0 20 421 624445076 624445477 0.000000e+00 693.0
27 TraesCS5A01G504400 chr5B 81.501 1546 248 34 1031 2566 677537470 677538987 0.000000e+00 1236.0
28 TraesCS5A01G504400 chr5B 81.436 1546 249 34 1031 2566 677545027 677543510 0.000000e+00 1230.0
29 TraesCS5A01G504400 chr5B 80.782 1483 249 32 997 2461 643460739 643462203 0.000000e+00 1127.0
30 TraesCS5A01G504400 chr5B 79.452 146 25 5 3001 3144 504519644 504519502 8.200000e-17 99.0
31 TraesCS5A01G504400 chr5D 81.358 1561 248 37 1017 2566 537088079 537089607 0.000000e+00 1230.0
32 TraesCS5A01G504400 chr5D 81.270 1559 248 38 1031 2578 537162858 537161333 0.000000e+00 1221.0
33 TraesCS5A01G504400 chr5D 80.539 1485 247 34 998 2461 512534343 512535806 0.000000e+00 1103.0
34 TraesCS5A01G504400 chr5D 92.766 235 17 0 3110 3344 448922718 448922952 1.230000e-89 340.0
35 TraesCS5A01G504400 chr5D 97.884 189 4 0 3119 3307 149772392 149772580 9.600000e-86 327.0
36 TraesCS5A01G504400 chr5D 96.875 192 6 0 3117 3308 262680541 262680350 4.470000e-84 322.0
37 TraesCS5A01G504400 chr2A 79.690 1546 276 29 1022 2554 18358282 18359802 0.000000e+00 1081.0
38 TraesCS5A01G504400 chr2A 86.695 233 30 1 2942 3173 367579222 367579454 1.280000e-64 257.0
39 TraesCS5A01G504400 chr2A 94.667 75 4 0 3290 3364 706551871 706551945 2.260000e-22 117.0
40 TraesCS5A01G504400 chr1A 97.783 406 9 0 16 421 519244740 519244335 0.000000e+00 701.0
41 TraesCS5A01G504400 chr1A 97.044 406 12 0 16 421 498411903 498411498 0.000000e+00 684.0
42 TraesCS5A01G504400 chr3A 97.985 397 8 0 25 421 575992391 575992787 0.000000e+00 689.0
43 TraesCS5A01G504400 chr3A 88.372 215 23 2 2937 3149 625037893 625038107 1.280000e-64 257.0
44 TraesCS5A01G504400 chr7A 97.512 402 10 0 20 421 64263195 64263596 0.000000e+00 688.0
45 TraesCS5A01G504400 chr7A 94.860 214 7 1 2909 3122 715247691 715247900 7.420000e-87 331.0
46 TraesCS5A01G504400 chr7A 94.667 75 1 3 3304 3376 64169116 64169189 2.930000e-21 113.0
47 TraesCS5A01G504400 chr6A 97.985 397 7 1 25 421 359154083 359154478 0.000000e+00 688.0
48 TraesCS5A01G504400 chr6A 94.393 214 8 1 2909 3122 451606519 451606310 3.450000e-85 326.0
49 TraesCS5A01G504400 chr6A 87.448 239 26 2 2907 3145 47980438 47980204 4.560000e-69 272.0
50 TraesCS5A01G504400 chr6A 89.286 140 13 2 3000 3138 36962470 36962608 1.320000e-39 174.0
51 TraesCS5A01G504400 chr1B 90.262 267 22 1 2907 3173 453883758 453883496 2.650000e-91 346.0
52 TraesCS5A01G504400 chr1B 94.907 216 7 1 2907 3122 555256561 555256772 5.740000e-88 335.0
53 TraesCS5A01G504400 chr1B 91.089 101 9 0 3265 3365 453883199 453883099 1.740000e-28 137.0
54 TraesCS5A01G504400 chr1B 100.000 61 0 0 3304 3364 555256768 555256828 2.930000e-21 113.0
55 TraesCS5A01G504400 chrUn 80.269 446 82 6 1958 2400 61731995 61731553 7.420000e-87 331.0
56 TraesCS5A01G504400 chrUn 96.859 191 6 0 3119 3309 175473801 175473991 1.610000e-83 320.0
57 TraesCS5A01G504400 chrUn 80.402 398 72 6 1958 2352 61733452 61733058 7.530000e-77 298.0
58 TraesCS5A01G504400 chr1D 94.860 214 7 1 2909 3122 281515231 281515022 7.420000e-87 331.0
59 TraesCS5A01G504400 chr1D 94.231 208 9 3 3116 3323 473696512 473696308 7.480000e-82 315.0
60 TraesCS5A01G504400 chr7D 94.444 216 8 1 2907 3122 294049935 294050146 2.670000e-86 329.0
61 TraesCS5A01G504400 chr7D 96.859 191 6 0 3118 3308 412100508 412100698 1.610000e-83 320.0
62 TraesCS5A01G504400 chr7D 97.368 76 2 0 3290 3365 600713492 600713567 2.910000e-26 130.0
63 TraesCS5A01G504400 chr2B 94.811 212 7 1 2910 3121 509155272 509155065 9.600000e-86 327.0
64 TraesCS5A01G504400 chr2B 94.393 214 8 1 2909 3122 135770190 135770399 3.450000e-85 326.0
65 TraesCS5A01G504400 chr2B 96.875 192 6 0 3116 3307 458962285 458962476 4.470000e-84 322.0
66 TraesCS5A01G504400 chr2B 100.000 63 0 0 3304 3366 341556045 341556107 2.260000e-22 117.0
67 TraesCS5A01G504400 chr2B 100.000 32 0 0 632 663 89434306 89434337 3.870000e-05 60.2
68 TraesCS5A01G504400 chr3D 93.023 215 13 2 3109 3323 42401929 42401717 2.690000e-81 313.0
69 TraesCS5A01G504400 chr2D 87.640 267 29 1 2907 3173 72771029 72771291 1.250000e-79 307.0
70 TraesCS5A01G504400 chr3B 82.500 240 27 6 2907 3135 815212114 815212349 2.830000e-46 196.0
71 TraesCS5A01G504400 chr6B 100.000 63 0 0 3304 3366 652122945 652122883 2.260000e-22 117.0
72 TraesCS5A01G504400 chr6D 98.462 65 1 0 3304 3368 460279570 460279506 8.140000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G504400 chr5A 670102280 670105866 3586 True 6625.0 6625 100.0000 1 3587 1 chr5A.!!$R2 3586
1 TraesCS5A01G504400 chr5A 640724643 640726106 1463 False 1099.0 1099 80.4320 997 2463 1 chr5A.!!$F3 1466
2 TraesCS5A01G504400 chr4D 488468242 488470943 2701 False 1226.0 3365 94.9110 418 2715 3 chr4D.!!$F3 2297
3 TraesCS5A01G504400 chr4D 479540651 479542201 1550 False 1114.0 1114 79.8360 998 2566 1 chr4D.!!$F2 1568
4 TraesCS5A01G504400 chr4D 479635923 479637822 1899 True 312.0 326 80.2235 1958 2400 2 chr4D.!!$R2 442
5 TraesCS5A01G504400 chr4B 624861290 624863295 2005 True 1638.0 3129 95.3975 670 2715 2 chr4B.!!$R6 2045
6 TraesCS5A01G504400 chr4B 606764705 606766264 1559 False 1096.0 1096 79.5850 998 2574 1 chr4B.!!$F1 1576
7 TraesCS5A01G504400 chr4B 624754388 624755027 639 True 246.0 272 86.4230 2536 3561 2 chr4B.!!$R5 1025
8 TraesCS5A01G504400 chr4A 632998322 632999836 1514 True 1249.0 1249 81.7070 1031 2566 1 chr4A.!!$R1 1535
9 TraesCS5A01G504400 chr4A 632989722 632991236 1514 False 1243.0 1243 81.6540 1031 2566 1 chr4A.!!$F2 1535
10 TraesCS5A01G504400 chr4A 685834791 685836356 1565 False 1142.0 1142 80.0380 991 2574 1 chr4A.!!$F3 1583
11 TraesCS5A01G504400 chr5B 677537470 677538987 1517 False 1236.0 1236 81.5010 1031 2566 1 chr5B.!!$F2 1535
12 TraesCS5A01G504400 chr5B 677543510 677545027 1517 True 1230.0 1230 81.4360 1031 2566 1 chr5B.!!$R2 1535
13 TraesCS5A01G504400 chr5B 643460739 643462203 1464 False 1127.0 1127 80.7820 997 2461 1 chr5B.!!$F1 1464
14 TraesCS5A01G504400 chr5D 537088079 537089607 1528 False 1230.0 1230 81.3580 1017 2566 1 chr5D.!!$F4 1549
15 TraesCS5A01G504400 chr5D 537161333 537162858 1525 True 1221.0 1221 81.2700 1031 2578 1 chr5D.!!$R2 1547
16 TraesCS5A01G504400 chr5D 512534343 512535806 1463 False 1103.0 1103 80.5390 998 2461 1 chr5D.!!$F3 1463
17 TraesCS5A01G504400 chr2A 18358282 18359802 1520 False 1081.0 1081 79.6900 1022 2554 1 chr2A.!!$F1 1532
18 TraesCS5A01G504400 chr1B 453883099 453883758 659 True 241.5 346 90.6755 2907 3365 2 chr1B.!!$R1 458
19 TraesCS5A01G504400 chrUn 61731553 61733452 1899 True 314.5 331 80.3355 1958 2400 2 chrUn.!!$R1 442

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 172 0.036875 CTCAACTTCTGGGGTGGGAC 59.963 60.0 0.00 0.0 0.00 4.46 F
1528 1547 0.176449 GATGCAAGGGTTTGGCATCC 59.824 55.0 13.33 0.0 39.38 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1690 1709 0.106708 GGCATCTTCATCCGCCAGTA 59.893 55.0 0.0 0.0 44.25 2.74 R
3379 4283 0.393944 CGGGGAAAACTAGGGGAAGC 60.394 60.0 0.0 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.270959 AGGGTAGACGTTCGGAACC 58.729 57.895 14.83 0.54 0.00 3.62
19 20 1.216444 GGGTAGACGTTCGGAACCC 59.784 63.158 14.83 9.48 42.87 4.11
76 77 3.591835 CGAGCGAGGAGGAGGAGC 61.592 72.222 0.00 0.00 0.00 4.70
90 91 4.477975 GAGCGCGCGTGTAGGTCT 62.478 66.667 32.35 17.82 0.00 3.85
93 94 3.812019 CGCGCGTGTAGGTCTCCT 61.812 66.667 24.19 0.00 37.71 3.69
94 95 2.102553 GCGCGTGTAGGTCTCCTC 59.897 66.667 8.43 0.00 34.61 3.71
95 96 2.408241 GCGCGTGTAGGTCTCCTCT 61.408 63.158 8.43 0.00 34.61 3.69
96 97 1.935327 GCGCGTGTAGGTCTCCTCTT 61.935 60.000 8.43 0.00 34.61 2.85
98 99 1.465794 GCGTGTAGGTCTCCTCTTCT 58.534 55.000 0.00 0.00 34.61 2.85
101 102 3.283751 CGTGTAGGTCTCCTCTTCTCAT 58.716 50.000 0.00 0.00 34.61 2.90
104 105 2.548464 AGGTCTCCTCTTCTCATGCT 57.452 50.000 0.00 0.00 0.00 3.79
106 107 2.106566 GGTCTCCTCTTCTCATGCTCA 58.893 52.381 0.00 0.00 0.00 4.26
107 108 2.699846 GGTCTCCTCTTCTCATGCTCAT 59.300 50.000 0.00 0.00 0.00 2.90
109 110 4.261994 GGTCTCCTCTTCTCATGCTCATAC 60.262 50.000 0.00 0.00 0.00 2.39
110 111 4.340666 GTCTCCTCTTCTCATGCTCATACA 59.659 45.833 0.00 0.00 0.00 2.29
111 112 4.958581 TCTCCTCTTCTCATGCTCATACAA 59.041 41.667 0.00 0.00 0.00 2.41
112 113 5.068855 TCTCCTCTTCTCATGCTCATACAAG 59.931 44.000 0.00 0.00 0.00 3.16
113 114 4.713814 TCCTCTTCTCATGCTCATACAAGT 59.286 41.667 0.00 0.00 0.00 3.16
114 115 4.809958 CCTCTTCTCATGCTCATACAAGTG 59.190 45.833 0.00 0.00 0.00 3.16
115 116 4.763073 TCTTCTCATGCTCATACAAGTGG 58.237 43.478 0.00 0.00 0.00 4.00
116 117 4.223700 TCTTCTCATGCTCATACAAGTGGT 59.776 41.667 0.00 0.00 0.00 4.16
117 118 5.422012 TCTTCTCATGCTCATACAAGTGGTA 59.578 40.000 0.00 0.00 36.16 3.25
119 120 4.956075 TCTCATGCTCATACAAGTGGTAGA 59.044 41.667 0.00 0.00 34.92 2.59
120 121 5.422012 TCTCATGCTCATACAAGTGGTAGAA 59.578 40.000 0.00 0.00 34.92 2.10
122 123 5.422012 TCATGCTCATACAAGTGGTAGAAGA 59.578 40.000 0.00 0.00 34.92 2.87
125 126 5.246203 TGCTCATACAAGTGGTAGAAGAACT 59.754 40.000 0.00 0.00 34.92 3.01
126 127 5.808030 GCTCATACAAGTGGTAGAAGAACTC 59.192 44.000 0.00 0.00 34.92 3.01
127 128 6.572509 GCTCATACAAGTGGTAGAAGAACTCA 60.573 42.308 0.00 0.00 34.92 3.41
128 129 6.688578 TCATACAAGTGGTAGAAGAACTCAC 58.311 40.000 0.00 0.00 34.92 3.51
130 131 3.967987 ACAAGTGGTAGAAGAACTCACCT 59.032 43.478 0.00 0.00 32.04 4.00
131 132 4.409247 ACAAGTGGTAGAAGAACTCACCTT 59.591 41.667 0.00 0.00 32.04 3.50
132 133 5.601313 ACAAGTGGTAGAAGAACTCACCTTA 59.399 40.000 0.00 0.00 32.04 2.69
133 134 6.270231 ACAAGTGGTAGAAGAACTCACCTTAT 59.730 38.462 0.00 0.00 32.04 1.73
134 135 7.453752 ACAAGTGGTAGAAGAACTCACCTTATA 59.546 37.037 0.00 0.00 32.04 0.98
135 136 8.311836 CAAGTGGTAGAAGAACTCACCTTATAA 58.688 37.037 0.00 0.00 32.04 0.98
137 138 8.532819 AGTGGTAGAAGAACTCACCTTATAAAG 58.467 37.037 0.00 0.00 32.04 1.85
138 139 8.529476 GTGGTAGAAGAACTCACCTTATAAAGA 58.471 37.037 0.00 0.00 32.04 2.52
150 151 5.735766 ACCTTATAAAGAGGTGCAACTCTC 58.264 41.667 33.62 18.20 46.70 3.20
151 152 5.485708 ACCTTATAAAGAGGTGCAACTCTCT 59.514 40.000 33.62 23.89 46.70 3.10
154 155 3.676291 AAAGAGGTGCAACTCTCTCTC 57.324 47.619 33.62 6.52 46.70 3.20
155 156 2.300956 AGAGGTGCAACTCTCTCTCA 57.699 50.000 28.85 0.00 44.23 3.27
157 158 2.298729 AGAGGTGCAACTCTCTCTCAAC 59.701 50.000 28.85 0.14 44.23 3.18
158 159 2.298729 GAGGTGCAACTCTCTCTCAACT 59.701 50.000 24.80 0.00 36.74 3.16
159 160 2.703007 AGGTGCAACTCTCTCTCAACTT 59.297 45.455 0.00 0.00 36.74 2.66
160 161 3.063485 GGTGCAACTCTCTCTCAACTTC 58.937 50.000 0.00 0.00 36.74 3.01
161 162 3.244044 GGTGCAACTCTCTCTCAACTTCT 60.244 47.826 0.00 0.00 36.74 2.85
162 163 3.740321 GTGCAACTCTCTCTCAACTTCTG 59.260 47.826 0.00 0.00 0.00 3.02
163 164 3.244009 TGCAACTCTCTCTCAACTTCTGG 60.244 47.826 0.00 0.00 0.00 3.86
164 165 3.864160 GCAACTCTCTCTCAACTTCTGGG 60.864 52.174 0.00 0.00 0.00 4.45
165 166 2.534990 ACTCTCTCTCAACTTCTGGGG 58.465 52.381 0.00 0.00 0.00 4.96
167 168 2.233431 CTCTCTCTCAACTTCTGGGGTG 59.767 54.545 0.00 0.00 0.00 4.61
170 171 0.104672 TCTCAACTTCTGGGGTGGGA 60.105 55.000 0.00 0.00 0.00 4.37
171 172 0.036875 CTCAACTTCTGGGGTGGGAC 59.963 60.000 0.00 0.00 0.00 4.46
172 173 0.401395 TCAACTTCTGGGGTGGGACT 60.401 55.000 0.00 0.00 0.00 3.85
173 174 1.132657 TCAACTTCTGGGGTGGGACTA 60.133 52.381 0.00 0.00 0.00 2.59
174 175 1.702957 CAACTTCTGGGGTGGGACTAA 59.297 52.381 0.00 0.00 0.00 2.24
175 176 2.107552 CAACTTCTGGGGTGGGACTAAA 59.892 50.000 0.00 0.00 0.00 1.85
176 177 1.703513 ACTTCTGGGGTGGGACTAAAC 59.296 52.381 0.00 0.00 0.00 2.01
178 179 2.127651 TCTGGGGTGGGACTAAACTT 57.872 50.000 0.00 0.00 0.00 2.66
179 180 2.424793 TCTGGGGTGGGACTAAACTTT 58.575 47.619 0.00 0.00 0.00 2.66
181 182 3.585732 TCTGGGGTGGGACTAAACTTTAG 59.414 47.826 6.96 6.96 0.00 1.85
184 185 2.307980 GGGTGGGACTAAACTTTAGCCT 59.692 50.000 8.26 0.00 0.00 4.58
185 186 3.607741 GGTGGGACTAAACTTTAGCCTC 58.392 50.000 8.26 0.00 0.00 4.70
186 187 3.008704 GGTGGGACTAAACTTTAGCCTCA 59.991 47.826 8.26 1.26 0.00 3.86
187 188 4.001652 GTGGGACTAAACTTTAGCCTCAC 58.998 47.826 10.94 10.94 0.00 3.51
188 189 3.908103 TGGGACTAAACTTTAGCCTCACT 59.092 43.478 8.26 0.00 0.00 3.41
189 190 4.020485 TGGGACTAAACTTTAGCCTCACTC 60.020 45.833 8.26 0.00 0.00 3.51
190 191 4.020485 GGGACTAAACTTTAGCCTCACTCA 60.020 45.833 8.26 0.00 0.00 3.41
191 192 4.930405 GGACTAAACTTTAGCCTCACTCAC 59.070 45.833 8.26 0.00 0.00 3.51
192 193 5.279556 GGACTAAACTTTAGCCTCACTCACT 60.280 44.000 8.26 0.00 0.00 3.41
193 194 5.785243 ACTAAACTTTAGCCTCACTCACTC 58.215 41.667 8.26 0.00 0.00 3.51
194 195 3.686916 AACTTTAGCCTCACTCACTCC 57.313 47.619 0.00 0.00 0.00 3.85
195 196 2.609747 ACTTTAGCCTCACTCACTCCA 58.390 47.619 0.00 0.00 0.00 3.86
196 197 2.300437 ACTTTAGCCTCACTCACTCCAC 59.700 50.000 0.00 0.00 0.00 4.02
197 198 2.310779 TTAGCCTCACTCACTCCACT 57.689 50.000 0.00 0.00 0.00 4.00
198 199 1.840737 TAGCCTCACTCACTCCACTC 58.159 55.000 0.00 0.00 0.00 3.51
199 200 0.178950 AGCCTCACTCACTCCACTCA 60.179 55.000 0.00 0.00 0.00 3.41
204 205 2.298446 CTCACTCACTCCACTCACATGT 59.702 50.000 0.00 0.00 0.00 3.21
205 206 2.036346 TCACTCACTCCACTCACATGTG 59.964 50.000 20.18 20.18 37.66 3.21
206 207 2.042464 ACTCACTCCACTCACATGTGT 58.958 47.619 24.63 4.31 36.30 3.72
207 208 2.224137 ACTCACTCCACTCACATGTGTG 60.224 50.000 24.63 23.70 46.91 3.82
209 210 0.469494 ACTCCACTCACATGTGTGCA 59.531 50.000 24.63 5.64 45.25 4.57
210 211 1.072806 ACTCCACTCACATGTGTGCAT 59.927 47.619 24.63 5.52 45.25 3.96
220 221 0.615261 ATGTGTGCATGAATGGGCCA 60.615 50.000 9.61 9.61 33.37 5.36
221 222 0.830866 TGTGTGCATGAATGGGCCAA 60.831 50.000 11.89 0.00 0.00 4.52
223 224 0.251698 TGTGCATGAATGGGCCAAGA 60.252 50.000 11.89 0.00 0.00 3.02
224 225 0.458669 GTGCATGAATGGGCCAAGAG 59.541 55.000 11.89 0.00 0.00 2.85
226 227 1.272592 TGCATGAATGGGCCAAGAGAA 60.273 47.619 11.89 0.00 0.00 2.87
227 228 2.037144 GCATGAATGGGCCAAGAGAAT 58.963 47.619 11.89 0.00 0.00 2.40
228 229 2.433239 GCATGAATGGGCCAAGAGAATT 59.567 45.455 11.89 0.00 0.00 2.17
229 230 3.118519 GCATGAATGGGCCAAGAGAATTT 60.119 43.478 11.89 0.00 0.00 1.82
232 233 3.765511 TGAATGGGCCAAGAGAATTTCAG 59.234 43.478 11.89 0.00 0.00 3.02
234 235 3.524095 TGGGCCAAGAGAATTTCAGAA 57.476 42.857 2.13 0.00 0.00 3.02
235 236 4.051661 TGGGCCAAGAGAATTTCAGAAT 57.948 40.909 2.13 0.00 0.00 2.40
238 239 5.307716 TGGGCCAAGAGAATTTCAGAATTTT 59.692 36.000 2.13 0.00 35.65 1.82
239 240 6.496565 TGGGCCAAGAGAATTTCAGAATTTTA 59.503 34.615 2.13 0.00 35.65 1.52
241 242 7.310052 GGGCCAAGAGAATTTCAGAATTTTAGT 60.310 37.037 4.39 0.00 35.65 2.24
242 243 8.090831 GGCCAAGAGAATTTCAGAATTTTAGTT 58.909 33.333 0.00 0.00 35.65 2.24
243 244 8.919661 GCCAAGAGAATTTCAGAATTTTAGTTG 58.080 33.333 0.00 0.00 35.65 3.16
244 245 9.415544 CCAAGAGAATTTCAGAATTTTAGTTGG 57.584 33.333 0.00 9.41 35.65 3.77
245 246 9.415544 CAAGAGAATTTCAGAATTTTAGTTGGG 57.584 33.333 0.00 0.00 35.65 4.12
246 247 8.940397 AGAGAATTTCAGAATTTTAGTTGGGA 57.060 30.769 0.00 0.00 35.65 4.37
252 253 6.603940 TCAGAATTTTAGTTGGGATTTGGG 57.396 37.500 0.00 0.00 0.00 4.12
253 254 5.046663 TCAGAATTTTAGTTGGGATTTGGGC 60.047 40.000 0.00 0.00 0.00 5.36
254 255 4.225042 AGAATTTTAGTTGGGATTTGGGCC 59.775 41.667 0.00 0.00 0.00 5.80
255 256 2.704190 TTTAGTTGGGATTTGGGCCA 57.296 45.000 0.00 0.00 0.00 5.36
256 257 2.704190 TTAGTTGGGATTTGGGCCAA 57.296 45.000 16.66 16.66 0.00 4.52
276 277 4.142160 CCAAAGGGCTACTAGCAAAATTCC 60.142 45.833 10.27 1.06 44.75 3.01
277 278 4.316025 AAGGGCTACTAGCAAAATTCCA 57.684 40.909 10.27 0.00 44.75 3.53
278 279 4.316025 AGGGCTACTAGCAAAATTCCAA 57.684 40.909 10.27 0.00 44.75 3.53
279 280 4.017126 AGGGCTACTAGCAAAATTCCAAC 58.983 43.478 10.27 0.00 44.75 3.77
280 281 3.761752 GGGCTACTAGCAAAATTCCAACA 59.238 43.478 10.27 0.00 44.75 3.33
281 282 4.219725 GGGCTACTAGCAAAATTCCAACAA 59.780 41.667 10.27 0.00 44.75 2.83
282 283 5.105351 GGGCTACTAGCAAAATTCCAACAAT 60.105 40.000 10.27 0.00 44.75 2.71
283 284 6.036470 GGCTACTAGCAAAATTCCAACAATC 58.964 40.000 10.27 0.00 44.75 2.67
285 286 5.405935 ACTAGCAAAATTCCAACAATCCC 57.594 39.130 0.00 0.00 0.00 3.85
286 287 3.701205 AGCAAAATTCCAACAATCCCC 57.299 42.857 0.00 0.00 0.00 4.81
288 289 2.039613 GCAAAATTCCAACAATCCCCCA 59.960 45.455 0.00 0.00 0.00 4.96
289 290 3.673902 CAAAATTCCAACAATCCCCCAC 58.326 45.455 0.00 0.00 0.00 4.61
290 291 2.711895 AATTCCAACAATCCCCCACA 57.288 45.000 0.00 0.00 0.00 4.17
291 292 2.711895 ATTCCAACAATCCCCCACAA 57.288 45.000 0.00 0.00 0.00 3.33
292 293 2.478872 TTCCAACAATCCCCCACAAA 57.521 45.000 0.00 0.00 0.00 2.83
293 294 2.008242 TCCAACAATCCCCCACAAAG 57.992 50.000 0.00 0.00 0.00 2.77
294 295 1.219213 TCCAACAATCCCCCACAAAGT 59.781 47.619 0.00 0.00 0.00 2.66
297 298 2.558359 CAACAATCCCCCACAAAGTCTC 59.442 50.000 0.00 0.00 0.00 3.36
298 299 1.780309 ACAATCCCCCACAAAGTCTCA 59.220 47.619 0.00 0.00 0.00 3.27
299 300 2.379907 ACAATCCCCCACAAAGTCTCAT 59.620 45.455 0.00 0.00 0.00 2.90
301 302 2.584835 TCCCCCACAAAGTCTCATTG 57.415 50.000 0.00 0.00 0.00 2.82
302 303 1.075374 TCCCCCACAAAGTCTCATTGG 59.925 52.381 0.00 0.00 32.02 3.16
303 304 0.890683 CCCCACAAAGTCTCATTGGC 59.109 55.000 0.00 0.00 32.02 4.52
304 305 1.619654 CCCACAAAGTCTCATTGGCA 58.380 50.000 0.00 0.00 32.02 4.92
306 307 1.955778 CCACAAAGTCTCATTGGCACA 59.044 47.619 0.00 0.00 32.02 4.57
307 308 2.559668 CCACAAAGTCTCATTGGCACAT 59.440 45.455 0.00 0.00 39.30 3.21
309 310 3.504906 CACAAAGTCTCATTGGCACATCT 59.495 43.478 0.00 0.00 39.30 2.90
310 311 3.755378 ACAAAGTCTCATTGGCACATCTC 59.245 43.478 0.00 0.00 39.30 2.75
311 312 3.708403 AAGTCTCATTGGCACATCTCA 57.292 42.857 0.00 0.00 39.30 3.27
313 314 3.806380 AGTCTCATTGGCACATCTCATC 58.194 45.455 0.00 0.00 39.30 2.92
314 315 3.199289 AGTCTCATTGGCACATCTCATCA 59.801 43.478 0.00 0.00 39.30 3.07
315 316 4.135306 GTCTCATTGGCACATCTCATCAT 58.865 43.478 0.00 0.00 39.30 2.45
316 317 4.579340 GTCTCATTGGCACATCTCATCATT 59.421 41.667 0.00 0.00 39.30 2.57
317 318 5.067413 GTCTCATTGGCACATCTCATCATTT 59.933 40.000 0.00 0.00 39.30 2.32
318 319 6.261603 GTCTCATTGGCACATCTCATCATTTA 59.738 38.462 0.00 0.00 39.30 1.40
319 320 6.485648 TCTCATTGGCACATCTCATCATTTAG 59.514 38.462 0.00 0.00 39.30 1.85
320 321 6.124340 TCATTGGCACATCTCATCATTTAGT 58.876 36.000 0.00 0.00 39.30 2.24
321 322 6.604396 TCATTGGCACATCTCATCATTTAGTT 59.396 34.615 0.00 0.00 39.30 2.24
322 323 6.441093 TTGGCACATCTCATCATTTAGTTC 57.559 37.500 0.00 0.00 39.30 3.01
325 326 5.357878 GGCACATCTCATCATTTAGTTCCAA 59.642 40.000 0.00 0.00 0.00 3.53
326 327 6.127647 GGCACATCTCATCATTTAGTTCCAAA 60.128 38.462 0.00 0.00 0.00 3.28
330 331 9.028284 ACATCTCATCATTTAGTTCCAAAACAT 57.972 29.630 0.00 0.00 37.88 2.71
331 332 9.865321 CATCTCATCATTTAGTTCCAAAACATT 57.135 29.630 0.00 0.00 37.88 2.71
332 333 9.865321 ATCTCATCATTTAGTTCCAAAACATTG 57.135 29.630 0.00 0.00 37.88 2.82
335 336 9.829507 TCATCATTTAGTTCCAAAACATTGTTT 57.170 25.926 8.97 8.97 37.88 2.83
348 349 8.751335 CCAAAACATTGTTTTATATATCGGTGC 58.249 33.333 23.24 0.00 0.00 5.01
349 350 9.515020 CAAAACATTGTTTTATATATCGGTGCT 57.485 29.630 23.24 0.00 0.00 4.40
353 354 9.555727 ACATTGTTTTATATATCGGTGCTTAGT 57.444 29.630 0.00 0.00 0.00 2.24
354 355 9.811655 CATTGTTTTATATATCGGTGCTTAGTG 57.188 33.333 0.00 0.00 0.00 2.74
355 356 7.956420 TGTTTTATATATCGGTGCTTAGTGG 57.044 36.000 0.00 0.00 0.00 4.00
356 357 7.728148 TGTTTTATATATCGGTGCTTAGTGGA 58.272 34.615 0.00 0.00 0.00 4.02
357 358 8.205512 TGTTTTATATATCGGTGCTTAGTGGAA 58.794 33.333 0.00 0.00 0.00 3.53
358 359 9.048446 GTTTTATATATCGGTGCTTAGTGGAAA 57.952 33.333 0.00 0.00 0.00 3.13
359 360 8.597662 TTTATATATCGGTGCTTAGTGGAAAC 57.402 34.615 0.00 0.00 0.00 2.78
360 361 4.755266 ATATCGGTGCTTAGTGGAAACT 57.245 40.909 0.00 0.00 0.00 2.66
361 362 2.163818 TCGGTGCTTAGTGGAAACTG 57.836 50.000 0.00 0.00 0.00 3.16
362 363 1.414919 TCGGTGCTTAGTGGAAACTGT 59.585 47.619 0.00 0.00 0.00 3.55
363 364 1.531149 CGGTGCTTAGTGGAAACTGTG 59.469 52.381 0.00 0.00 0.00 3.66
364 365 2.805295 CGGTGCTTAGTGGAAACTGTGA 60.805 50.000 0.00 0.00 0.00 3.58
365 366 3.211045 GGTGCTTAGTGGAAACTGTGAA 58.789 45.455 0.00 0.00 0.00 3.18
366 367 3.251004 GGTGCTTAGTGGAAACTGTGAAG 59.749 47.826 0.00 0.00 0.00 3.02
368 369 4.335594 GTGCTTAGTGGAAACTGTGAAGTT 59.664 41.667 0.00 0.00 0.00 2.66
369 370 4.335315 TGCTTAGTGGAAACTGTGAAGTTG 59.665 41.667 0.00 0.00 31.64 3.16
370 371 4.574828 GCTTAGTGGAAACTGTGAAGTTGA 59.425 41.667 0.00 0.00 31.64 3.18
371 372 5.065988 GCTTAGTGGAAACTGTGAAGTTGAA 59.934 40.000 0.00 0.00 31.64 2.69
372 373 4.965119 AGTGGAAACTGTGAAGTTGAAC 57.035 40.909 0.00 0.00 31.64 3.18
373 374 4.589908 AGTGGAAACTGTGAAGTTGAACT 58.410 39.130 0.00 0.00 31.64 3.01
374 375 5.010282 AGTGGAAACTGTGAAGTTGAACTT 58.990 37.500 10.82 10.82 41.95 2.66
392 393 9.129209 GTTGAACTTCCACTTAGAAATTTATGC 57.871 33.333 0.00 0.00 0.00 3.14
393 394 8.635765 TGAACTTCCACTTAGAAATTTATGCT 57.364 30.769 0.00 0.00 0.00 3.79
394 395 9.733556 TGAACTTCCACTTAGAAATTTATGCTA 57.266 29.630 0.00 0.00 0.00 3.49
395 396 9.989869 GAACTTCCACTTAGAAATTTATGCTAC 57.010 33.333 0.00 0.00 0.00 3.58
396 397 9.515226 AACTTCCACTTAGAAATTTATGCTACA 57.485 29.630 0.00 0.00 0.00 2.74
397 398 8.947115 ACTTCCACTTAGAAATTTATGCTACAC 58.053 33.333 0.00 0.00 0.00 2.90
398 399 9.167311 CTTCCACTTAGAAATTTATGCTACACT 57.833 33.333 0.00 0.00 0.00 3.55
400 401 9.817809 TCCACTTAGAAATTTATGCTACACTAG 57.182 33.333 0.00 0.00 0.00 2.57
401 402 9.817809 CCACTTAGAAATTTATGCTACACTAGA 57.182 33.333 0.00 0.00 0.00 2.43
407 408 9.890629 AGAAATTTATGCTACACTAGATCACAA 57.109 29.630 0.00 0.00 0.00 3.33
408 409 9.922305 GAAATTTATGCTACACTAGATCACAAC 57.078 33.333 0.00 0.00 0.00 3.32
409 410 9.672673 AAATTTATGCTACACTAGATCACAACT 57.327 29.630 0.00 0.00 0.00 3.16
410 411 9.672673 AATTTATGCTACACTAGATCACAACTT 57.327 29.630 0.00 0.00 0.00 2.66
411 412 8.479313 TTTATGCTACACTAGATCACAACTTG 57.521 34.615 0.00 0.00 0.00 3.16
412 413 5.722021 TGCTACACTAGATCACAACTTGA 57.278 39.130 0.00 0.00 39.11 3.02
413 414 6.096673 TGCTACACTAGATCACAACTTGAA 57.903 37.500 0.00 0.00 37.92 2.69
414 415 6.701340 TGCTACACTAGATCACAACTTGAAT 58.299 36.000 0.00 0.00 37.92 2.57
415 416 7.836842 TGCTACACTAGATCACAACTTGAATA 58.163 34.615 0.00 0.00 37.92 1.75
416 417 7.976175 TGCTACACTAGATCACAACTTGAATAG 59.024 37.037 0.00 0.00 37.92 1.73
457 458 3.630312 AGCAACTTTAACATCACGGTGTT 59.370 39.130 8.17 0.71 44.09 3.32
512 525 2.725723 GCATGTTTTGGTTCATGTGACG 59.274 45.455 0.00 0.00 42.09 4.35
513 526 3.307674 CATGTTTTGGTTCATGTGACGG 58.692 45.455 0.00 0.00 37.31 4.79
514 527 2.644676 TGTTTTGGTTCATGTGACGGA 58.355 42.857 0.00 0.00 0.00 4.69
516 529 2.875933 GTTTTGGTTCATGTGACGGAGA 59.124 45.455 0.00 0.00 0.00 3.71
517 530 2.163818 TTGGTTCATGTGACGGAGAC 57.836 50.000 0.00 0.00 0.00 3.36
518 531 0.320374 TGGTTCATGTGACGGAGACC 59.680 55.000 0.00 0.00 0.00 3.85
519 532 0.320374 GGTTCATGTGACGGAGACCA 59.680 55.000 0.00 0.00 0.00 4.02
522 535 1.266178 TCATGTGACGGAGACCATGT 58.734 50.000 0.00 0.00 34.65 3.21
523 536 1.623311 TCATGTGACGGAGACCATGTT 59.377 47.619 0.00 0.00 34.65 2.71
525 538 1.338107 TGTGACGGAGACCATGTTCT 58.662 50.000 0.00 0.00 0.00 3.01
586 599 5.067273 ACACAAAAATGTACGGATCTTGGA 58.933 37.500 0.00 0.00 0.00 3.53
614 627 4.036852 GCAGACTAAACAAGAATATGCCCC 59.963 45.833 0.00 0.00 0.00 5.80
627 640 2.037847 GCCCCTGGCTCCAAACAT 59.962 61.111 0.00 0.00 46.69 2.71
628 641 1.610379 GCCCCTGGCTCCAAACATT 60.610 57.895 0.00 0.00 46.69 2.71
629 642 1.194121 GCCCCTGGCTCCAAACATTT 61.194 55.000 0.00 0.00 46.69 2.32
630 643 1.351076 CCCCTGGCTCCAAACATTTT 58.649 50.000 0.00 0.00 0.00 1.82
638 651 5.678583 TGGCTCCAAACATTTTCATTTTCA 58.321 33.333 0.00 0.00 0.00 2.69
667 680 0.385974 CGAAAGCAAAACCTCCGCAG 60.386 55.000 0.00 0.00 0.00 5.18
668 681 0.668535 GAAAGCAAAACCTCCGCAGT 59.331 50.000 0.00 0.00 0.00 4.40
686 699 0.179200 GTCCGCATGCACGTAAAAGG 60.179 55.000 19.57 8.10 0.00 3.11
694 707 1.131826 CACGTAAAAGGGCTTCGCG 59.868 57.895 0.00 0.00 0.00 5.87
736 749 2.288395 CCCTCCATGTTGTTCTTTGCAC 60.288 50.000 0.00 0.00 0.00 4.57
744 757 3.186909 GTTGTTCTTTGCACAAGGGAAC 58.813 45.455 16.96 16.96 34.79 3.62
838 851 4.268687 GAGCCCCGAATATGCTCG 57.731 61.111 0.00 0.00 41.74 5.03
861 874 3.131223 CCTCTCCGTATATACATGGCTGG 59.869 52.174 13.22 5.01 0.00 4.85
973 991 2.817834 GGAACGCACGCATAGGCA 60.818 61.111 0.00 0.00 41.24 4.75
974 992 2.180204 GGAACGCACGCATAGGCAT 61.180 57.895 0.00 0.00 41.24 4.40
1505 1524 2.813908 GTTCATCGCCGCCGTCTT 60.814 61.111 0.00 0.00 35.54 3.01
1516 1535 2.697425 CCGTCTTCGCGATGCAAG 59.303 61.111 10.88 3.99 35.54 4.01
1517 1536 2.697425 CGTCTTCGCGATGCAAGG 59.303 61.111 10.88 0.00 0.00 3.61
1519 1538 1.741770 GTCTTCGCGATGCAAGGGT 60.742 57.895 10.88 0.00 0.00 4.34
1520 1539 1.003839 TCTTCGCGATGCAAGGGTT 60.004 52.632 10.88 0.00 0.00 4.11
1521 1540 0.605319 TCTTCGCGATGCAAGGGTTT 60.605 50.000 10.88 0.00 0.00 3.27
1525 1544 2.929903 GCGATGCAAGGGTTTGGCA 61.930 57.895 0.00 0.00 34.79 4.92
1528 1547 0.176449 GATGCAAGGGTTTGGCATCC 59.824 55.000 13.33 0.00 39.38 3.51
1529 1548 0.252375 ATGCAAGGGTTTGGCATCCT 60.252 50.000 0.00 4.37 34.79 3.24
1531 1550 1.937546 GCAAGGGTTTGGCATCCTCG 61.938 60.000 8.69 0.00 34.79 4.63
1532 1551 1.678970 AAGGGTTTGGCATCCTCGC 60.679 57.895 8.69 0.00 0.00 5.03
1559 1578 1.664965 GCGTGGCTATCGGGATCAC 60.665 63.158 0.00 0.00 0.00 3.06
1562 1581 2.048127 GGCTATCGGGATCACGGC 60.048 66.667 18.99 13.13 0.00 5.68
1563 1582 2.430921 GCTATCGGGATCACGGCG 60.431 66.667 18.99 4.80 0.00 6.46
1564 1583 2.430921 CTATCGGGATCACGGCGC 60.431 66.667 18.99 0.00 0.00 6.53
1565 1584 2.910479 TATCGGGATCACGGCGCT 60.910 61.111 18.99 2.74 0.00 5.92
1570 1589 2.434185 GGATCACGGCGCTGTTCA 60.434 61.111 21.75 9.97 0.00 3.18
1571 1590 2.456119 GGATCACGGCGCTGTTCAG 61.456 63.158 21.75 9.22 0.00 3.02
1573 1592 3.958147 ATCACGGCGCTGTTCAGGG 62.958 63.158 21.75 8.37 0.00 4.45
1574 1593 4.680237 CACGGCGCTGTTCAGGGA 62.680 66.667 21.75 0.00 0.00 4.20
1577 1596 4.021925 GGCGCTGTTCAGGGACCT 62.022 66.667 18.54 0.00 0.00 3.85
1579 1598 2.743718 CGCTGTTCAGGGACCTGT 59.256 61.111 17.34 0.00 43.96 4.00
1580 1599 1.071471 CGCTGTTCAGGGACCTGTT 59.929 57.895 17.34 0.00 43.96 3.16
1643 1662 2.809601 GCAGGCGGACTACGTGTG 60.810 66.667 0.00 0.00 46.52 3.82
1644 1663 2.126071 CAGGCGGACTACGTGTGG 60.126 66.667 0.00 0.00 46.52 4.17
1645 1664 4.065281 AGGCGGACTACGTGTGGC 62.065 66.667 0.00 0.00 46.52 5.01
1648 1667 4.710695 CGGACTACGTGTGGCGCA 62.711 66.667 10.83 0.00 46.11 6.09
1649 1668 2.125673 GGACTACGTGTGGCGCAT 60.126 61.111 10.83 0.00 46.11 4.73
1650 1669 2.165301 GGACTACGTGTGGCGCATC 61.165 63.158 10.83 1.19 46.11 3.91
1651 1670 2.505498 GACTACGTGTGGCGCATCG 61.505 63.158 10.83 17.18 46.11 3.84
1652 1671 2.506217 CTACGTGTGGCGCATCGT 60.506 61.111 24.02 24.02 46.11 3.73
1653 1672 2.788176 CTACGTGTGGCGCATCGTG 61.788 63.158 26.83 17.59 46.11 4.35
1659 1678 3.197092 TGGCGCATCGTGCTCATG 61.197 61.111 10.83 0.00 42.25 3.07
1691 1710 4.492160 CGCCGCGCTCACCTTCTA 62.492 66.667 5.56 0.00 0.00 2.10
1694 1713 1.517257 CCGCGCTCACCTTCTACTG 60.517 63.158 5.56 0.00 0.00 2.74
1695 1714 1.517257 CGCGCTCACCTTCTACTGG 60.517 63.158 5.56 0.00 0.00 4.00
1696 1715 1.811679 GCGCTCACCTTCTACTGGC 60.812 63.158 0.00 0.00 0.00 4.85
1697 1716 1.517257 CGCTCACCTTCTACTGGCG 60.517 63.158 0.00 0.00 35.54 5.69
1698 1717 1.153549 GCTCACCTTCTACTGGCGG 60.154 63.158 0.00 0.00 0.00 6.13
1699 1718 1.605058 GCTCACCTTCTACTGGCGGA 61.605 60.000 0.00 0.00 0.00 5.54
1700 1719 1.115467 CTCACCTTCTACTGGCGGAT 58.885 55.000 0.00 0.00 0.00 4.18
1703 1722 1.207089 CACCTTCTACTGGCGGATGAA 59.793 52.381 0.00 3.01 0.00 2.57
1708 1727 1.069204 TCTACTGGCGGATGAAGATGC 59.931 52.381 0.00 0.00 0.00 3.91
1711 1730 2.974698 GGCGGATGAAGATGCCGG 60.975 66.667 0.00 0.00 44.92 6.13
1712 1731 2.108976 GCGGATGAAGATGCCGGA 59.891 61.111 5.05 0.00 44.92 5.14
1714 1733 1.742146 CGGATGAAGATGCCGGAGA 59.258 57.895 5.05 0.00 41.29 3.71
1738 1757 2.954868 GGTACACGGCGCTCATCG 60.955 66.667 6.90 4.49 42.12 3.84
1748 1767 2.401195 GCTCATCGCCAAGAACGC 59.599 61.111 0.00 0.00 0.00 4.84
1752 1771 2.509336 ATCGCCAAGAACGCCGAG 60.509 61.111 0.00 0.00 32.86 4.63
1778 1797 2.351276 GGCCGACATGTCCAAGGT 59.649 61.111 20.03 0.00 0.00 3.50
1781 1800 1.003355 CCGACATGTCCAAGGTGCT 60.003 57.895 20.03 0.00 0.00 4.40
1782 1801 1.021390 CCGACATGTCCAAGGTGCTC 61.021 60.000 20.03 0.00 0.00 4.26
1783 1802 1.021390 CGACATGTCCAAGGTGCTCC 61.021 60.000 20.03 0.00 0.00 4.70
1784 1803 0.036732 GACATGTCCAAGGTGCTCCA 59.963 55.000 15.31 0.00 35.89 3.86
1785 1804 0.250901 ACATGTCCAAGGTGCTCCAC 60.251 55.000 7.70 0.00 35.89 4.02
1786 1805 1.003355 ATGTCCAAGGTGCTCCACG 60.003 57.895 7.70 0.00 34.83 4.94
1789 1808 2.669569 CCAAGGTGCTCCACGTGG 60.670 66.667 29.26 29.26 35.16 4.94
1799 1818 2.753319 TCCACGTGGAGATCACCAA 58.247 52.632 33.23 8.06 43.23 3.67
1804 1823 0.460987 CGTGGAGATCACCAAGGAGC 60.461 60.000 13.92 0.16 43.23 4.70
1808 1827 0.463474 GAGATCACCAAGGAGCAGGC 60.463 60.000 0.00 0.00 0.00 4.85
1821 1840 4.598894 CAGGCCGGCGATCTGGAG 62.599 72.222 22.54 0.00 41.45 3.86
1823 1842 4.593864 GGCCGGCGATCTGGAGAC 62.594 72.222 22.54 0.00 41.45 3.36
1824 1843 4.593864 GCCGGCGATCTGGAGACC 62.594 72.222 12.58 0.00 41.45 3.85
1829 1848 1.736586 GCGATCTGGAGACCGTGAT 59.263 57.895 0.00 0.00 0.00 3.06
1830 1849 0.103208 GCGATCTGGAGACCGTGATT 59.897 55.000 0.00 0.00 0.00 2.57
1831 1850 1.471676 GCGATCTGGAGACCGTGATTT 60.472 52.381 0.00 0.00 0.00 2.17
1840 1859 3.600388 GAGACCGTGATTTCCATCAAGT 58.400 45.455 0.00 0.00 41.30 3.16
1846 1865 3.420893 GTGATTTCCATCAAGTCCCACA 58.579 45.455 0.00 0.00 41.30 4.17
1850 1869 2.040544 CCATCAAGTCCCACACGCC 61.041 63.158 0.00 0.00 0.00 5.68
1851 1870 2.047274 ATCAAGTCCCACACGCCG 60.047 61.111 0.00 0.00 0.00 6.46
1852 1871 4.980805 TCAAGTCCCACACGCCGC 62.981 66.667 0.00 0.00 0.00 6.53
1873 1892 2.567049 CGTCGTTCGGCCTCTTCT 59.433 61.111 0.00 0.00 35.71 2.85
1874 1893 1.514443 CGTCGTTCGGCCTCTTCTC 60.514 63.158 0.00 0.00 35.71 2.87
1875 1894 1.153804 GTCGTTCGGCCTCTTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
1876 1895 2.184579 CGTTCGGCCTCTTCTCCC 59.815 66.667 0.00 0.00 0.00 4.30
1877 1896 2.184579 GTTCGGCCTCTTCTCCCG 59.815 66.667 0.00 0.00 43.21 5.14
1878 1897 3.075005 TTCGGCCTCTTCTCCCGG 61.075 66.667 0.00 0.00 42.18 5.73
1882 1901 2.364448 GCCTCTTCTCCCGGGAGT 60.364 66.667 42.36 0.00 42.49 3.85
1883 1902 1.990614 GCCTCTTCTCCCGGGAGTT 60.991 63.158 42.36 0.00 42.49 3.01
1885 1904 1.668101 CCTCTTCTCCCGGGAGTTCG 61.668 65.000 42.36 31.25 42.49 3.95
1886 1905 0.966370 CTCTTCTCCCGGGAGTTCGT 60.966 60.000 42.36 0.00 42.49 3.85
1888 1907 2.837371 CTTCTCCCGGGAGTTCGTGC 62.837 65.000 42.36 0.00 42.49 5.34
1889 1908 4.796231 CTCCCGGGAGTTCGTGCG 62.796 72.222 38.17 14.93 37.47 5.34
1940 1959 2.680352 GACGTGGCTCCTCCTGGA 60.680 66.667 0.00 0.00 40.69 3.86
1943 1962 2.362369 CGTGGCTCCTCCTGGACAT 61.362 63.158 0.00 0.00 37.46 3.06
1949 1968 0.468214 CTCCTCCTGGACATCGCCTA 60.468 60.000 0.00 0.00 37.46 3.93
1952 1971 1.478837 CCTCCTGGACATCGCCTACTA 60.479 57.143 0.00 0.00 34.57 1.82
1955 1974 1.609555 CCTGGACATCGCCTACTACTC 59.390 57.143 0.00 0.00 0.00 2.59
1958 1977 0.661552 GACATCGCCTACTACTCGCA 59.338 55.000 0.00 0.00 0.00 5.10
1959 1978 0.663688 ACATCGCCTACTACTCGCAG 59.336 55.000 0.00 0.00 0.00 5.18
1960 1979 0.945099 CATCGCCTACTACTCGCAGA 59.055 55.000 0.00 0.00 0.00 4.26
1961 1980 1.333931 CATCGCCTACTACTCGCAGAA 59.666 52.381 0.00 0.00 34.09 3.02
2523 2569 0.532573 TCATGCTCACCTTCCTCGTC 59.467 55.000 0.00 0.00 0.00 4.20
2612 3202 2.426261 CGTCTCGTCGTTGCGTCA 60.426 61.111 0.00 0.00 0.00 4.35
2613 3203 2.007114 CGTCTCGTCGTTGCGTCAA 61.007 57.895 0.00 0.00 0.00 3.18
2614 3204 1.767388 GTCTCGTCGTTGCGTCAAG 59.233 57.895 0.00 0.00 0.00 3.02
2615 3205 0.659417 GTCTCGTCGTTGCGTCAAGA 60.659 55.000 0.00 0.00 0.00 3.02
2616 3206 0.240145 TCTCGTCGTTGCGTCAAGAT 59.760 50.000 0.00 0.00 0.00 2.40
2617 3207 0.635731 CTCGTCGTTGCGTCAAGATC 59.364 55.000 0.00 0.00 0.00 2.75
2618 3208 0.731514 TCGTCGTTGCGTCAAGATCC 60.732 55.000 0.00 0.00 0.00 3.36
2619 3209 1.702299 GTCGTTGCGTCAAGATCCG 59.298 57.895 0.00 0.00 0.00 4.18
2624 3214 3.918220 GCGTCAAGATCCGCTGCG 61.918 66.667 16.34 16.34 46.08 5.18
2626 3216 1.226575 CGTCAAGATCCGCTGCGTA 60.227 57.895 21.59 5.30 0.00 4.42
2715 3321 3.601586 GCGACATGGTGAAATAATCGTCG 60.602 47.826 0.00 0.00 45.65 5.12
2716 3322 3.550275 CGACATGGTGAAATAATCGTCGT 59.450 43.478 0.00 0.00 39.93 4.34
2717 3323 4.317139 CGACATGGTGAAATAATCGTCGTC 60.317 45.833 0.00 0.00 39.93 4.20
2719 3325 4.328983 ACATGGTGAAATAATCGTCGTCAC 59.671 41.667 0.00 3.51 38.28 3.67
2721 3327 3.924073 TGGTGAAATAATCGTCGTCACAG 59.076 43.478 11.90 0.00 40.28 3.66
2726 3332 7.234384 GTGAAATAATCGTCGTCACAGAAATT 58.766 34.615 6.55 0.00 38.74 1.82
2729 3335 9.749490 GAAATAATCGTCGTCACAGAAATTAAA 57.251 29.630 0.00 0.00 0.00 1.52
2730 3336 9.755064 AAATAATCGTCGTCACAGAAATTAAAG 57.245 29.630 0.00 0.00 0.00 1.85
2731 3337 4.640805 TCGTCGTCACAGAAATTAAAGC 57.359 40.909 0.00 0.00 0.00 3.51
2732 3338 3.120616 TCGTCGTCACAGAAATTAAAGCG 59.879 43.478 0.00 0.00 0.00 4.68
2733 3339 3.153735 GTCGTCACAGAAATTAAAGCGC 58.846 45.455 0.00 0.00 0.00 5.92
2734 3340 2.158143 CGTCACAGAAATTAAAGCGCG 58.842 47.619 0.00 0.00 0.00 6.86
2735 3341 2.411031 CGTCACAGAAATTAAAGCGCGT 60.411 45.455 8.43 0.00 0.00 6.01
2793 3403 8.836413 TCTCTTTACTGTGGTGTGAAAAATTAG 58.164 33.333 0.00 0.00 0.00 1.73
2801 3411 3.317150 GTGTGAAAAATTAGGTGGCTGC 58.683 45.455 0.00 0.00 0.00 5.25
2828 3487 4.164221 TGGGAAGCTATTTACCTGAGAAGG 59.836 45.833 0.00 0.00 40.83 3.46
2843 3502 3.017442 GAGAAGGGCTTTGGGTATGTTC 58.983 50.000 0.00 0.00 0.00 3.18
2847 3506 2.092323 GGGCTTTGGGTATGTTCTGAC 58.908 52.381 0.00 0.00 0.00 3.51
2848 3507 2.554344 GGGCTTTGGGTATGTTCTGACA 60.554 50.000 0.00 0.00 40.71 3.58
2863 3522 5.187772 TGTTCTGACATACATCTAGCCAGTT 59.812 40.000 0.00 0.00 0.00 3.16
2884 3543 4.336889 TTTGACCGAGTCACTCAATCTT 57.663 40.909 5.45 0.00 42.60 2.40
2890 3549 4.065088 CCGAGTCACTCAATCTTTTTCCA 58.935 43.478 5.45 0.00 0.00 3.53
2891 3550 4.515191 CCGAGTCACTCAATCTTTTTCCAA 59.485 41.667 5.45 0.00 0.00 3.53
2894 3553 6.382869 AGTCACTCAATCTTTTTCCAACTG 57.617 37.500 0.00 0.00 0.00 3.16
2896 3555 4.889409 TCACTCAATCTTTTTCCAACTGCT 59.111 37.500 0.00 0.00 0.00 4.24
2897 3556 5.009010 TCACTCAATCTTTTTCCAACTGCTC 59.991 40.000 0.00 0.00 0.00 4.26
2898 3557 4.889409 ACTCAATCTTTTTCCAACTGCTCA 59.111 37.500 0.00 0.00 0.00 4.26
2899 3558 5.360714 ACTCAATCTTTTTCCAACTGCTCAA 59.639 36.000 0.00 0.00 0.00 3.02
2900 3559 5.591099 TCAATCTTTTTCCAACTGCTCAAC 58.409 37.500 0.00 0.00 0.00 3.18
2901 3560 3.691049 TCTTTTTCCAACTGCTCAACG 57.309 42.857 0.00 0.00 0.00 4.10
2902 3561 3.013921 TCTTTTTCCAACTGCTCAACGT 58.986 40.909 0.00 0.00 0.00 3.99
2903 3562 2.842208 TTTTCCAACTGCTCAACGTG 57.158 45.000 0.00 0.00 0.00 4.49
2904 3563 2.031258 TTTCCAACTGCTCAACGTGA 57.969 45.000 0.00 0.00 0.00 4.35
2905 3564 1.581934 TTCCAACTGCTCAACGTGAG 58.418 50.000 9.73 9.73 46.90 3.51
2939 3598 5.535406 TCATAGTGGGAGTAACTTAGCTAGC 59.465 44.000 6.62 6.62 0.00 3.42
2940 3599 3.983821 AGTGGGAGTAACTTAGCTAGCT 58.016 45.455 23.12 23.12 0.00 3.32
2941 3600 5.126699 AGTGGGAGTAACTTAGCTAGCTA 57.873 43.478 20.67 20.67 0.00 3.32
2942 3601 5.134661 AGTGGGAGTAACTTAGCTAGCTAG 58.865 45.833 23.03 16.84 0.00 3.42
2970 3629 7.367285 ACATAGCGCACTTCAAGAAATTTTTA 58.633 30.769 11.47 0.00 0.00 1.52
2981 3640 9.474920 CTTCAAGAAATTTTTACTTATGTGGCA 57.525 29.630 0.00 0.00 0.00 4.92
2982 3641 9.823647 TTCAAGAAATTTTTACTTATGTGGCAA 57.176 25.926 0.00 0.00 0.00 4.52
2999 3658 6.477253 TGTGGCAAGTATTTAATGTGAGGTA 58.523 36.000 0.00 0.00 0.00 3.08
3038 3697 2.235155 TGTAACATAGCGCTTCCCAAGA 59.765 45.455 18.68 0.00 0.00 3.02
3071 3730 9.326413 GAGTCTACAAGCTAATAAATAAAGCCA 57.674 33.333 0.00 0.00 36.92 4.75
3131 3790 5.664665 AGGTAGTAACTTAGGGGGTGTTTA 58.335 41.667 0.00 0.00 0.00 2.01
3132 3791 5.723405 AGGTAGTAACTTAGGGGGTGTTTAG 59.277 44.000 0.00 0.00 0.00 1.85
3173 3832 6.325545 TGTGTTGAGACTAGAAAAAGTCCCTA 59.674 38.462 0.00 0.00 45.86 3.53
3174 3833 6.869388 GTGTTGAGACTAGAAAAAGTCCCTAG 59.131 42.308 0.00 0.00 45.86 3.02
3175 3834 5.662674 TGAGACTAGAAAAAGTCCCTAGC 57.337 43.478 0.00 0.00 45.86 3.42
3179 4083 6.231951 AGACTAGAAAAAGTCCCTAGCAAAC 58.768 40.000 0.00 0.00 45.86 2.93
3189 4093 1.480498 CCCTAGCAAACCAAACAGGGT 60.480 52.381 0.00 0.00 45.04 4.34
3229 4133 7.859613 CTTTTTGCTAAAAGTCCTTAGAAGC 57.140 36.000 20.79 0.00 43.34 3.86
3230 4134 6.952773 TTTTGCTAAAAGTCCTTAGAAGCA 57.047 33.333 6.73 6.73 31.59 3.91
3231 4135 5.941948 TTGCTAAAAGTCCTTAGAAGCAC 57.058 39.130 9.21 0.00 31.59 4.40
3232 4136 4.324267 TGCTAAAAGTCCTTAGAAGCACC 58.676 43.478 6.73 0.00 31.59 5.01
3233 4137 4.041691 TGCTAAAAGTCCTTAGAAGCACCT 59.958 41.667 6.73 0.00 31.59 4.00
3234 4138 4.632251 GCTAAAAGTCCTTAGAAGCACCTC 59.368 45.833 0.00 0.00 31.59 3.85
3235 4139 3.704800 AAAGTCCTTAGAAGCACCTCC 57.295 47.619 0.00 0.00 0.00 4.30
3236 4140 2.632763 AGTCCTTAGAAGCACCTCCT 57.367 50.000 0.00 0.00 0.00 3.69
3237 4141 2.909217 AGTCCTTAGAAGCACCTCCTT 58.091 47.619 0.00 0.00 0.00 3.36
3238 4142 2.569404 AGTCCTTAGAAGCACCTCCTTG 59.431 50.000 0.00 0.00 0.00 3.61
3239 4143 2.567615 GTCCTTAGAAGCACCTCCTTGA 59.432 50.000 0.00 0.00 0.00 3.02
3240 4144 2.834549 TCCTTAGAAGCACCTCCTTGAG 59.165 50.000 0.00 0.00 0.00 3.02
3241 4145 2.834549 CCTTAGAAGCACCTCCTTGAGA 59.165 50.000 0.00 0.00 0.00 3.27
3242 4146 3.118811 CCTTAGAAGCACCTCCTTGAGAG 60.119 52.174 0.00 0.00 42.83 3.20
3243 4147 2.022718 AGAAGCACCTCCTTGAGAGT 57.977 50.000 0.00 0.00 41.47 3.24
3244 4148 1.899142 AGAAGCACCTCCTTGAGAGTC 59.101 52.381 0.00 0.00 41.47 3.36
3245 4149 1.899142 GAAGCACCTCCTTGAGAGTCT 59.101 52.381 0.00 0.00 41.47 3.24
3246 4150 2.022718 AGCACCTCCTTGAGAGTCTT 57.977 50.000 0.00 0.00 41.47 3.01
3247 4151 2.334023 AGCACCTCCTTGAGAGTCTTT 58.666 47.619 0.00 0.00 41.47 2.52
3248 4152 2.708325 AGCACCTCCTTGAGAGTCTTTT 59.292 45.455 0.00 0.00 41.47 2.27
3249 4153 3.137360 AGCACCTCCTTGAGAGTCTTTTT 59.863 43.478 0.00 0.00 41.47 1.94
3250 4154 3.500299 GCACCTCCTTGAGAGTCTTTTTC 59.500 47.826 0.00 0.00 41.47 2.29
3251 4155 4.708177 CACCTCCTTGAGAGTCTTTTTCA 58.292 43.478 0.00 0.00 41.47 2.69
3252 4156 5.126067 CACCTCCTTGAGAGTCTTTTTCAA 58.874 41.667 0.00 0.00 41.47 2.69
3253 4157 5.590259 CACCTCCTTGAGAGTCTTTTTCAAA 59.410 40.000 0.00 0.00 41.47 2.69
3254 4158 6.095440 CACCTCCTTGAGAGTCTTTTTCAAAA 59.905 38.462 0.00 0.00 41.47 2.44
3255 4159 6.663523 ACCTCCTTGAGAGTCTTTTTCAAAAA 59.336 34.615 0.00 0.00 41.47 1.94
3256 4160 7.148000 ACCTCCTTGAGAGTCTTTTTCAAAAAG 60.148 37.037 15.46 15.46 41.47 2.27
3257 4161 7.148000 CCTCCTTGAGAGTCTTTTTCAAAAAGT 60.148 37.037 19.82 4.20 41.47 2.66
3258 4162 7.762382 TCCTTGAGAGTCTTTTTCAAAAAGTC 58.238 34.615 19.82 15.25 31.11 3.01
3259 4163 6.975197 CCTTGAGAGTCTTTTTCAAAAAGTCC 59.025 38.462 19.82 12.77 31.11 3.85
3260 4164 7.148000 CCTTGAGAGTCTTTTTCAAAAAGTCCT 60.148 37.037 19.82 16.49 31.11 3.85
3261 4165 8.801882 TTGAGAGTCTTTTTCAAAAAGTCCTA 57.198 30.769 19.82 0.61 0.00 2.94
3262 4166 8.438676 TGAGAGTCTTTTTCAAAAAGTCCTAG 57.561 34.615 19.82 0.00 0.00 3.02
3263 4167 7.499232 TGAGAGTCTTTTTCAAAAAGTCCTAGG 59.501 37.037 19.82 0.82 0.00 3.02
3299 4203 4.771054 TCCTAGGACTAGAGAACCAAACAC 59.229 45.833 7.62 0.00 35.21 3.32
3300 4204 4.081586 CCTAGGACTAGAGAACCAAACACC 60.082 50.000 1.05 0.00 35.21 4.16
3301 4205 3.314693 AGGACTAGAGAACCAAACACCA 58.685 45.455 0.00 0.00 0.00 4.17
3320 4224 3.195825 ACCACCTTAGACTAGTGTCATGC 59.804 47.826 0.00 0.00 45.20 4.06
3379 4283 3.057174 AGCCTAAGTGACTCTTCGTGAAG 60.057 47.826 3.17 3.17 39.71 3.02
3389 4293 1.825474 TCTTCGTGAAGCTTCCCCTAG 59.175 52.381 23.42 14.87 38.28 3.02
3410 4314 3.129813 AGTTTTCCCCGAAAGTGTTGTTC 59.870 43.478 0.00 0.00 32.93 3.18
3416 4320 2.484264 CCCGAAAGTGTTGTTCTGATCC 59.516 50.000 0.00 0.00 0.00 3.36
3424 4328 1.066858 GTTGTTCTGATCCCGAGAGCA 60.067 52.381 0.00 0.00 35.64 4.26
3425 4329 1.489481 TGTTCTGATCCCGAGAGCAT 58.511 50.000 0.00 0.00 37.87 3.79
3429 4333 1.383109 TGATCCCGAGAGCATGGGT 60.383 57.895 0.00 0.00 46.13 4.51
3430 4334 1.070445 GATCCCGAGAGCATGGGTG 59.930 63.158 0.00 0.00 46.13 4.61
3432 4336 0.982852 ATCCCGAGAGCATGGGTGAA 60.983 55.000 0.00 0.00 46.13 3.18
3433 4337 1.450312 CCCGAGAGCATGGGTGAAC 60.450 63.158 0.00 0.00 40.76 3.18
3434 4338 1.296392 CCGAGAGCATGGGTGAACA 59.704 57.895 0.00 0.00 0.00 3.18
3435 4339 0.742281 CCGAGAGCATGGGTGAACAG 60.742 60.000 0.00 0.00 0.00 3.16
3436 4340 0.036952 CGAGAGCATGGGTGAACAGT 60.037 55.000 0.00 0.00 0.00 3.55
3437 4341 1.204704 CGAGAGCATGGGTGAACAGTA 59.795 52.381 0.00 0.00 0.00 2.74
3442 4346 4.520492 AGAGCATGGGTGAACAGTAAAAAG 59.480 41.667 0.00 0.00 0.00 2.27
3450 4354 5.538813 GGGTGAACAGTAAAAAGAGGGAAAT 59.461 40.000 0.00 0.00 0.00 2.17
3518 4422 8.489559 CATTGACAAATGTTTGATTGGTTACAG 58.510 33.333 12.09 0.00 40.55 2.74
3532 4436 4.641396 TGGTTACAGAGTTTCATCACCAG 58.359 43.478 0.00 0.00 0.00 4.00
3536 4440 2.224621 ACAGAGTTTCATCACCAGGTGG 60.225 50.000 20.14 4.56 42.17 4.61
3542 4446 0.697658 TCATCACCAGGTGGCATTCA 59.302 50.000 20.14 0.00 39.32 2.57
3544 4448 2.509131 TCATCACCAGGTGGCATTCATA 59.491 45.455 20.14 0.00 39.32 2.15
3561 4465 7.238571 GCATTCATAGAAAACATGGCAAAAAG 58.761 34.615 0.00 0.00 0.00 2.27
3562 4466 7.118101 GCATTCATAGAAAACATGGCAAAAAGA 59.882 33.333 0.00 0.00 0.00 2.52
3563 4467 8.991026 CATTCATAGAAAACATGGCAAAAAGAA 58.009 29.630 0.00 0.00 0.00 2.52
3564 4468 8.954950 TTCATAGAAAACATGGCAAAAAGAAA 57.045 26.923 0.00 0.00 0.00 2.52
3565 4469 9.558396 TTCATAGAAAACATGGCAAAAAGAAAT 57.442 25.926 0.00 0.00 0.00 2.17
3566 4470 9.206870 TCATAGAAAACATGGCAAAAAGAAATC 57.793 29.630 0.00 0.00 0.00 2.17
3567 4471 8.991026 CATAGAAAACATGGCAAAAAGAAATCA 58.009 29.630 0.00 0.00 0.00 2.57
3568 4472 7.862512 AGAAAACATGGCAAAAAGAAATCAA 57.137 28.000 0.00 0.00 0.00 2.57
3569 4473 8.454570 AGAAAACATGGCAAAAAGAAATCAAT 57.545 26.923 0.00 0.00 0.00 2.57
3570 4474 8.347035 AGAAAACATGGCAAAAAGAAATCAATG 58.653 29.630 0.00 0.00 0.00 2.82
3571 4475 5.616488 ACATGGCAAAAAGAAATCAATGC 57.384 34.783 0.00 0.00 0.00 3.56
3572 4476 5.310451 ACATGGCAAAAAGAAATCAATGCT 58.690 33.333 0.00 0.00 34.37 3.79
3573 4477 5.766174 ACATGGCAAAAAGAAATCAATGCTT 59.234 32.000 0.00 0.00 34.37 3.91
3574 4478 5.927954 TGGCAAAAAGAAATCAATGCTTC 57.072 34.783 0.00 0.00 34.37 3.86
3575 4479 5.366460 TGGCAAAAAGAAATCAATGCTTCA 58.634 33.333 0.00 0.00 34.37 3.02
3576 4480 5.821470 TGGCAAAAAGAAATCAATGCTTCAA 59.179 32.000 0.00 0.00 34.37 2.69
3577 4481 6.318144 TGGCAAAAAGAAATCAATGCTTCAAA 59.682 30.769 0.00 0.00 34.37 2.69
3578 4482 7.148120 TGGCAAAAAGAAATCAATGCTTCAAAA 60.148 29.630 0.00 0.00 34.37 2.44
3579 4483 7.863877 GGCAAAAAGAAATCAATGCTTCAAAAT 59.136 29.630 0.00 0.00 34.37 1.82
3580 4484 8.687301 GCAAAAAGAAATCAATGCTTCAAAATG 58.313 29.630 0.00 0.00 0.00 2.32
3581 4485 9.724839 CAAAAAGAAATCAATGCTTCAAAATGT 57.275 25.926 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.253593 GGGTTCCGAACGTCTACCCT 61.254 60.000 15.91 0.00 44.10 4.34
55 56 3.591835 CTCCTCCTCGCTCGCCTC 61.592 72.222 0.00 0.00 0.00 4.70
58 59 3.591835 CTCCTCCTCCTCGCTCGC 61.592 72.222 0.00 0.00 0.00 5.03
59 60 3.591835 GCTCCTCCTCCTCGCTCG 61.592 72.222 0.00 0.00 0.00 5.03
60 61 3.591835 CGCTCCTCCTCCTCGCTC 61.592 72.222 0.00 0.00 0.00 5.03
73 74 4.477975 AGACCTACACGCGCGCTC 62.478 66.667 32.58 17.73 0.00 5.03
74 75 4.477975 GAGACCTACACGCGCGCT 62.478 66.667 32.58 17.28 0.00 5.92
76 77 3.736482 GAGGAGACCTACACGCGCG 62.736 68.421 30.96 30.96 31.76 6.86
78 79 0.099082 GAAGAGGAGACCTACACGCG 59.901 60.000 3.53 3.53 31.76 6.01
79 80 1.402613 GAGAAGAGGAGACCTACACGC 59.597 57.143 0.00 0.00 31.76 5.34
80 81 2.712709 TGAGAAGAGGAGACCTACACG 58.287 52.381 0.00 0.00 31.76 4.49
81 82 3.181480 GCATGAGAAGAGGAGACCTACAC 60.181 52.174 0.00 0.00 31.76 2.90
82 83 3.027412 GCATGAGAAGAGGAGACCTACA 58.973 50.000 0.00 0.00 31.76 2.74
83 84 3.295973 AGCATGAGAAGAGGAGACCTAC 58.704 50.000 0.00 0.00 31.76 3.18
84 85 3.053320 TGAGCATGAGAAGAGGAGACCTA 60.053 47.826 0.00 0.00 31.76 3.08
85 86 2.292126 TGAGCATGAGAAGAGGAGACCT 60.292 50.000 0.00 0.00 36.03 3.85
86 87 2.106566 TGAGCATGAGAAGAGGAGACC 58.893 52.381 0.00 0.00 0.00 3.85
87 88 4.340666 TGTATGAGCATGAGAAGAGGAGAC 59.659 45.833 0.00 0.00 0.00 3.36
90 91 4.713814 ACTTGTATGAGCATGAGAAGAGGA 59.286 41.667 0.00 0.00 0.00 3.71
93 94 4.223700 ACCACTTGTATGAGCATGAGAAGA 59.776 41.667 0.00 0.00 0.00 2.87
94 95 4.511527 ACCACTTGTATGAGCATGAGAAG 58.488 43.478 0.00 0.00 0.00 2.85
95 96 4.558226 ACCACTTGTATGAGCATGAGAA 57.442 40.909 0.00 0.00 0.00 2.87
96 97 4.956075 TCTACCACTTGTATGAGCATGAGA 59.044 41.667 0.00 0.00 0.00 3.27
98 99 5.422012 TCTTCTACCACTTGTATGAGCATGA 59.578 40.000 0.00 0.00 0.00 3.07
101 102 5.246203 AGTTCTTCTACCACTTGTATGAGCA 59.754 40.000 0.00 0.00 0.00 4.26
104 105 6.295123 GGTGAGTTCTTCTACCACTTGTATGA 60.295 42.308 0.00 0.00 33.42 2.15
106 107 5.780793 AGGTGAGTTCTTCTACCACTTGTAT 59.219 40.000 0.00 0.00 35.66 2.29
107 108 5.145564 AGGTGAGTTCTTCTACCACTTGTA 58.854 41.667 0.00 0.00 35.66 2.41
109 110 4.608948 AGGTGAGTTCTTCTACCACTTG 57.391 45.455 0.00 0.00 35.66 3.16
110 111 6.936968 ATAAGGTGAGTTCTTCTACCACTT 57.063 37.500 0.00 0.00 35.66 3.16
111 112 8.431910 TTTATAAGGTGAGTTCTTCTACCACT 57.568 34.615 0.00 0.00 35.66 4.00
112 113 8.529476 TCTTTATAAGGTGAGTTCTTCTACCAC 58.471 37.037 0.00 0.00 35.66 4.16
113 114 8.660295 TCTTTATAAGGTGAGTTCTTCTACCA 57.340 34.615 0.00 0.00 35.66 3.25
114 115 8.198778 CCTCTTTATAAGGTGAGTTCTTCTACC 58.801 40.741 0.00 0.00 0.00 3.18
115 116 8.751242 ACCTCTTTATAAGGTGAGTTCTTCTAC 58.249 37.037 0.00 0.00 45.50 2.59
116 117 8.896722 ACCTCTTTATAAGGTGAGTTCTTCTA 57.103 34.615 0.00 0.00 45.50 2.10
117 118 7.800300 ACCTCTTTATAAGGTGAGTTCTTCT 57.200 36.000 0.00 0.00 45.50 2.85
128 129 5.983540 AGAGAGTTGCACCTCTTTATAAGG 58.016 41.667 15.62 0.00 41.85 2.69
130 131 6.437477 TGAGAGAGAGTTGCACCTCTTTATAA 59.563 38.462 15.62 0.00 41.85 0.98
131 132 5.952347 TGAGAGAGAGTTGCACCTCTTTATA 59.048 40.000 15.62 0.00 41.85 0.98
132 133 4.774726 TGAGAGAGAGTTGCACCTCTTTAT 59.225 41.667 15.62 6.95 41.85 1.40
133 134 4.152647 TGAGAGAGAGTTGCACCTCTTTA 58.847 43.478 15.62 0.00 41.85 1.85
134 135 2.968574 TGAGAGAGAGTTGCACCTCTTT 59.031 45.455 15.62 9.81 41.85 2.52
135 136 2.603021 TGAGAGAGAGTTGCACCTCTT 58.397 47.619 15.62 5.53 41.85 2.85
137 138 2.298729 AGTTGAGAGAGAGTTGCACCTC 59.701 50.000 2.46 2.46 0.00 3.85
138 139 2.324541 AGTTGAGAGAGAGTTGCACCT 58.675 47.619 0.00 0.00 0.00 4.00
142 143 3.324993 CCAGAAGTTGAGAGAGAGTTGC 58.675 50.000 0.00 0.00 0.00 4.17
145 146 2.158234 ACCCCAGAAGTTGAGAGAGAGT 60.158 50.000 0.00 0.00 0.00 3.24
147 148 2.251818 CACCCCAGAAGTTGAGAGAGA 58.748 52.381 0.00 0.00 0.00 3.10
148 149 1.277557 CCACCCCAGAAGTTGAGAGAG 59.722 57.143 0.00 0.00 0.00 3.20
149 150 1.352083 CCACCCCAGAAGTTGAGAGA 58.648 55.000 0.00 0.00 0.00 3.10
150 151 0.326264 CCCACCCCAGAAGTTGAGAG 59.674 60.000 0.00 0.00 0.00 3.20
151 152 0.104672 TCCCACCCCAGAAGTTGAGA 60.105 55.000 0.00 0.00 0.00 3.27
154 155 1.358152 TAGTCCCACCCCAGAAGTTG 58.642 55.000 0.00 0.00 0.00 3.16
155 156 2.107726 GTTTAGTCCCACCCCAGAAGTT 59.892 50.000 0.00 0.00 0.00 2.66
157 158 1.985895 AGTTTAGTCCCACCCCAGAAG 59.014 52.381 0.00 0.00 0.00 2.85
158 159 2.127651 AGTTTAGTCCCACCCCAGAA 57.872 50.000 0.00 0.00 0.00 3.02
159 160 2.127651 AAGTTTAGTCCCACCCCAGA 57.872 50.000 0.00 0.00 0.00 3.86
160 161 2.971901 AAAGTTTAGTCCCACCCCAG 57.028 50.000 0.00 0.00 0.00 4.45
161 162 2.040679 GCTAAAGTTTAGTCCCACCCCA 59.959 50.000 20.95 0.00 0.00 4.96
162 163 2.619849 GGCTAAAGTTTAGTCCCACCCC 60.620 54.545 20.95 10.04 0.00 4.95
163 164 2.307980 AGGCTAAAGTTTAGTCCCACCC 59.692 50.000 20.94 13.24 0.00 4.61
164 165 3.008704 TGAGGCTAAAGTTTAGTCCCACC 59.991 47.826 20.94 13.85 0.00 4.61
165 166 4.001652 GTGAGGCTAAAGTTTAGTCCCAC 58.998 47.826 21.36 21.36 0.00 4.61
167 168 4.020485 TGAGTGAGGCTAAAGTTTAGTCCC 60.020 45.833 20.94 12.08 0.00 4.46
170 171 5.279556 GGAGTGAGTGAGGCTAAAGTTTAGT 60.280 44.000 20.95 5.16 0.00 2.24
171 172 5.172205 GGAGTGAGTGAGGCTAAAGTTTAG 58.828 45.833 16.87 16.87 0.00 1.85
172 173 4.591498 TGGAGTGAGTGAGGCTAAAGTTTA 59.409 41.667 0.00 0.00 0.00 2.01
173 174 3.391296 TGGAGTGAGTGAGGCTAAAGTTT 59.609 43.478 0.00 0.00 0.00 2.66
174 175 2.972713 TGGAGTGAGTGAGGCTAAAGTT 59.027 45.455 0.00 0.00 0.00 2.66
175 176 2.300437 GTGGAGTGAGTGAGGCTAAAGT 59.700 50.000 0.00 0.00 0.00 2.66
176 177 2.564947 AGTGGAGTGAGTGAGGCTAAAG 59.435 50.000 0.00 0.00 0.00 1.85
178 179 2.171840 GAGTGGAGTGAGTGAGGCTAA 58.828 52.381 0.00 0.00 0.00 3.09
179 180 1.075536 TGAGTGGAGTGAGTGAGGCTA 59.924 52.381 0.00 0.00 0.00 3.93
181 182 0.037790 GTGAGTGGAGTGAGTGAGGC 60.038 60.000 0.00 0.00 0.00 4.70
184 185 2.036346 CACATGTGAGTGGAGTGAGTGA 59.964 50.000 21.64 0.00 35.88 3.41
185 186 2.224137 ACACATGTGAGTGGAGTGAGTG 60.224 50.000 31.94 0.49 43.72 3.51
186 187 2.042464 ACACATGTGAGTGGAGTGAGT 58.958 47.619 31.94 1.87 43.72 3.41
187 188 2.827800 ACACATGTGAGTGGAGTGAG 57.172 50.000 31.94 1.10 43.72 3.51
204 205 0.251698 TCTTGGCCCATTCATGCACA 60.252 50.000 0.00 0.00 0.00 4.57
205 206 0.458669 CTCTTGGCCCATTCATGCAC 59.541 55.000 0.00 0.00 0.00 4.57
206 207 0.332293 TCTCTTGGCCCATTCATGCA 59.668 50.000 0.00 0.00 0.00 3.96
207 208 1.477553 TTCTCTTGGCCCATTCATGC 58.522 50.000 0.00 0.00 0.00 4.06
209 210 4.355549 TGAAATTCTCTTGGCCCATTCAT 58.644 39.130 0.00 0.00 0.00 2.57
210 211 3.765511 CTGAAATTCTCTTGGCCCATTCA 59.234 43.478 0.00 0.00 0.00 2.57
211 212 4.019174 TCTGAAATTCTCTTGGCCCATTC 58.981 43.478 0.00 0.00 0.00 2.67
212 213 4.051661 TCTGAAATTCTCTTGGCCCATT 57.948 40.909 0.00 0.00 0.00 3.16
213 214 3.744940 TCTGAAATTCTCTTGGCCCAT 57.255 42.857 0.00 0.00 0.00 4.00
215 216 5.411831 AAATTCTGAAATTCTCTTGGCCC 57.588 39.130 0.00 0.00 33.93 5.80
216 217 7.606349 ACTAAAATTCTGAAATTCTCTTGGCC 58.394 34.615 0.00 0.00 33.93 5.36
217 218 8.919661 CAACTAAAATTCTGAAATTCTCTTGGC 58.080 33.333 0.00 0.00 33.93 4.52
218 219 9.415544 CCAACTAAAATTCTGAAATTCTCTTGG 57.584 33.333 0.00 1.19 33.93 3.61
220 221 9.367160 TCCCAACTAAAATTCTGAAATTCTCTT 57.633 29.630 0.00 0.00 33.93 2.85
221 222 8.940397 TCCCAACTAAAATTCTGAAATTCTCT 57.060 30.769 0.00 0.00 33.93 3.10
226 227 8.102676 CCCAAATCCCAACTAAAATTCTGAAAT 58.897 33.333 0.00 0.00 0.00 2.17
227 228 7.449247 CCCAAATCCCAACTAAAATTCTGAAA 58.551 34.615 0.00 0.00 0.00 2.69
228 229 6.519891 GCCCAAATCCCAACTAAAATTCTGAA 60.520 38.462 0.00 0.00 0.00 3.02
229 230 5.046663 GCCCAAATCCCAACTAAAATTCTGA 60.047 40.000 0.00 0.00 0.00 3.27
232 233 4.019771 TGGCCCAAATCCCAACTAAAATTC 60.020 41.667 0.00 0.00 0.00 2.17
234 235 3.525862 TGGCCCAAATCCCAACTAAAAT 58.474 40.909 0.00 0.00 0.00 1.82
235 236 2.977808 TGGCCCAAATCCCAACTAAAA 58.022 42.857 0.00 0.00 0.00 1.52
238 239 2.534990 CTTTGGCCCAAATCCCAACTA 58.465 47.619 9.81 0.00 40.60 2.24
239 240 1.351076 CTTTGGCCCAAATCCCAACT 58.649 50.000 9.81 0.00 40.60 3.16
241 242 0.839853 CCCTTTGGCCCAAATCCCAA 60.840 55.000 9.81 0.00 39.23 4.12
242 243 1.229464 CCCTTTGGCCCAAATCCCA 60.229 57.895 9.81 0.00 32.70 4.37
243 244 3.726004 CCCTTTGGCCCAAATCCC 58.274 61.111 9.81 0.00 32.70 3.85
253 254 4.142160 GGAATTTTGCTAGTAGCCCTTTGG 60.142 45.833 19.41 0.00 41.51 3.28
254 255 4.462483 TGGAATTTTGCTAGTAGCCCTTTG 59.538 41.667 19.41 0.00 41.51 2.77
255 256 4.672899 TGGAATTTTGCTAGTAGCCCTTT 58.327 39.130 19.41 7.88 41.51 3.11
256 257 4.316025 TGGAATTTTGCTAGTAGCCCTT 57.684 40.909 19.41 7.39 41.51 3.95
262 263 5.420739 GGGGATTGTTGGAATTTTGCTAGTA 59.579 40.000 0.00 0.00 0.00 1.82
263 264 4.222810 GGGGATTGTTGGAATTTTGCTAGT 59.777 41.667 0.00 0.00 0.00 2.57
265 266 3.517500 GGGGGATTGTTGGAATTTTGCTA 59.482 43.478 0.00 0.00 0.00 3.49
266 267 2.305635 GGGGGATTGTTGGAATTTTGCT 59.694 45.455 0.00 0.00 0.00 3.91
267 268 2.039613 TGGGGGATTGTTGGAATTTTGC 59.960 45.455 0.00 0.00 0.00 3.68
269 270 3.321950 TGTGGGGGATTGTTGGAATTTT 58.678 40.909 0.00 0.00 0.00 1.82
270 271 2.983296 TGTGGGGGATTGTTGGAATTT 58.017 42.857 0.00 0.00 0.00 1.82
271 272 2.711895 TGTGGGGGATTGTTGGAATT 57.288 45.000 0.00 0.00 0.00 2.17
272 273 2.711895 TTGTGGGGGATTGTTGGAAT 57.288 45.000 0.00 0.00 0.00 3.01
276 277 2.558359 GAGACTTTGTGGGGGATTGTTG 59.442 50.000 0.00 0.00 0.00 3.33
277 278 2.176798 TGAGACTTTGTGGGGGATTGTT 59.823 45.455 0.00 0.00 0.00 2.83
278 279 1.780309 TGAGACTTTGTGGGGGATTGT 59.220 47.619 0.00 0.00 0.00 2.71
279 280 2.584835 TGAGACTTTGTGGGGGATTG 57.415 50.000 0.00 0.00 0.00 2.67
280 281 3.434309 CAATGAGACTTTGTGGGGGATT 58.566 45.455 0.00 0.00 0.00 3.01
281 282 2.291800 CCAATGAGACTTTGTGGGGGAT 60.292 50.000 0.00 0.00 0.00 3.85
282 283 1.075374 CCAATGAGACTTTGTGGGGGA 59.925 52.381 0.00 0.00 0.00 4.81
283 284 1.549203 CCAATGAGACTTTGTGGGGG 58.451 55.000 0.00 0.00 0.00 5.40
285 286 1.270550 GTGCCAATGAGACTTTGTGGG 59.729 52.381 0.00 0.00 0.00 4.61
286 287 1.955778 TGTGCCAATGAGACTTTGTGG 59.044 47.619 0.00 0.00 0.00 4.17
288 289 3.755378 GAGATGTGCCAATGAGACTTTGT 59.245 43.478 0.00 0.00 0.00 2.83
289 290 3.754850 TGAGATGTGCCAATGAGACTTTG 59.245 43.478 0.00 0.00 0.00 2.77
290 291 4.025040 TGAGATGTGCCAATGAGACTTT 57.975 40.909 0.00 0.00 0.00 2.66
291 292 3.708403 TGAGATGTGCCAATGAGACTT 57.292 42.857 0.00 0.00 0.00 3.01
292 293 3.199289 TGATGAGATGTGCCAATGAGACT 59.801 43.478 0.00 0.00 0.00 3.24
293 294 3.538591 TGATGAGATGTGCCAATGAGAC 58.461 45.455 0.00 0.00 0.00 3.36
294 295 3.918294 TGATGAGATGTGCCAATGAGA 57.082 42.857 0.00 0.00 0.00 3.27
297 298 6.387041 ACTAAATGATGAGATGTGCCAATG 57.613 37.500 0.00 0.00 0.00 2.82
298 299 6.040166 GGAACTAAATGATGAGATGTGCCAAT 59.960 38.462 0.00 0.00 0.00 3.16
299 300 5.357878 GGAACTAAATGATGAGATGTGCCAA 59.642 40.000 0.00 0.00 0.00 4.52
301 302 4.883585 TGGAACTAAATGATGAGATGTGCC 59.116 41.667 0.00 0.00 0.00 5.01
302 303 6.441093 TTGGAACTAAATGATGAGATGTGC 57.559 37.500 0.00 0.00 0.00 4.57
303 304 8.298854 TGTTTTGGAACTAAATGATGAGATGTG 58.701 33.333 0.00 0.00 36.70 3.21
304 305 8.408043 TGTTTTGGAACTAAATGATGAGATGT 57.592 30.769 0.00 0.00 36.70 3.06
306 307 9.865321 CAATGTTTTGGAACTAAATGATGAGAT 57.135 29.630 0.00 0.00 36.70 2.75
307 308 8.859090 ACAATGTTTTGGAACTAAATGATGAGA 58.141 29.630 0.00 0.00 37.15 3.27
309 310 9.829507 AAACAATGTTTTGGAACTAAATGATGA 57.170 25.926 5.41 0.00 37.15 2.92
322 323 8.751335 GCACCGATATATAAAACAATGTTTTGG 58.249 33.333 28.25 21.47 37.15 3.28
330 331 8.205512 TCCACTAAGCACCGATATATAAAACAA 58.794 33.333 0.00 0.00 0.00 2.83
331 332 7.728148 TCCACTAAGCACCGATATATAAAACA 58.272 34.615 0.00 0.00 0.00 2.83
332 333 8.597662 TTCCACTAAGCACCGATATATAAAAC 57.402 34.615 0.00 0.00 0.00 2.43
335 336 7.870954 CAGTTTCCACTAAGCACCGATATATAA 59.129 37.037 0.00 0.00 0.00 0.98
336 337 7.014905 ACAGTTTCCACTAAGCACCGATATATA 59.985 37.037 0.00 0.00 0.00 0.86
337 338 6.183360 ACAGTTTCCACTAAGCACCGATATAT 60.183 38.462 0.00 0.00 0.00 0.86
339 340 4.081087 ACAGTTTCCACTAAGCACCGATAT 60.081 41.667 0.00 0.00 0.00 1.63
341 342 2.038557 ACAGTTTCCACTAAGCACCGAT 59.961 45.455 0.00 0.00 0.00 4.18
342 343 1.414919 ACAGTTTCCACTAAGCACCGA 59.585 47.619 0.00 0.00 0.00 4.69
344 345 2.846193 TCACAGTTTCCACTAAGCACC 58.154 47.619 0.00 0.00 0.00 5.01
346 347 4.150897 ACTTCACAGTTTCCACTAAGCA 57.849 40.909 0.00 0.00 0.00 3.91
347 348 4.574828 TCAACTTCACAGTTTCCACTAAGC 59.425 41.667 0.00 0.00 40.66 3.09
348 349 6.316390 AGTTCAACTTCACAGTTTCCACTAAG 59.684 38.462 0.00 0.00 40.66 2.18
349 350 6.177610 AGTTCAACTTCACAGTTTCCACTAA 58.822 36.000 0.00 0.00 40.66 2.24
350 351 5.741011 AGTTCAACTTCACAGTTTCCACTA 58.259 37.500 0.00 0.00 40.66 2.74
352 353 4.965119 AGTTCAACTTCACAGTTTCCAC 57.035 40.909 0.00 0.00 40.66 4.02
366 367 9.129209 GCATAAATTTCTAAGTGGAAGTTCAAC 57.871 33.333 1.76 1.76 0.00 3.18
368 369 8.635765 AGCATAAATTTCTAAGTGGAAGTTCA 57.364 30.769 5.01 0.00 0.00 3.18
369 370 9.989869 GTAGCATAAATTTCTAAGTGGAAGTTC 57.010 33.333 0.00 0.00 0.00 3.01
370 371 9.515226 TGTAGCATAAATTTCTAAGTGGAAGTT 57.485 29.630 0.00 0.00 0.00 2.66
371 372 8.947115 GTGTAGCATAAATTTCTAAGTGGAAGT 58.053 33.333 0.00 0.00 0.00 3.01
372 373 9.167311 AGTGTAGCATAAATTTCTAAGTGGAAG 57.833 33.333 0.00 0.00 0.00 3.46
374 375 9.817809 CTAGTGTAGCATAAATTTCTAAGTGGA 57.182 33.333 0.00 0.00 0.00 4.02
375 376 9.817809 TCTAGTGTAGCATAAATTTCTAAGTGG 57.182 33.333 0.00 0.00 0.00 4.00
381 382 9.890629 TTGTGATCTAGTGTAGCATAAATTTCT 57.109 29.630 0.00 0.00 0.00 2.52
382 383 9.922305 GTTGTGATCTAGTGTAGCATAAATTTC 57.078 33.333 0.00 0.00 0.00 2.17
383 384 9.672673 AGTTGTGATCTAGTGTAGCATAAATTT 57.327 29.630 0.00 0.00 0.00 1.82
384 385 9.672673 AAGTTGTGATCTAGTGTAGCATAAATT 57.327 29.630 0.00 0.00 0.00 1.82
385 386 9.102757 CAAGTTGTGATCTAGTGTAGCATAAAT 57.897 33.333 0.00 0.00 0.00 1.40
387 388 7.836842 TCAAGTTGTGATCTAGTGTAGCATAA 58.163 34.615 2.11 0.00 0.00 1.90
389 390 6.286240 TCAAGTTGTGATCTAGTGTAGCAT 57.714 37.500 2.11 0.00 0.00 3.79
391 392 7.976734 ACTATTCAAGTTGTGATCTAGTGTAGC 59.023 37.037 2.11 0.00 35.39 3.58
392 393 9.295214 CACTATTCAAGTTGTGATCTAGTGTAG 57.705 37.037 2.11 0.00 41.90 2.74
393 394 8.251026 CCACTATTCAAGTTGTGATCTAGTGTA 58.749 37.037 19.32 0.00 43.37 2.90
394 395 7.039011 TCCACTATTCAAGTTGTGATCTAGTGT 60.039 37.037 19.32 4.25 43.37 3.55
395 396 7.323420 TCCACTATTCAAGTTGTGATCTAGTG 58.677 38.462 2.11 12.26 43.85 2.74
396 397 7.482169 TCCACTATTCAAGTTGTGATCTAGT 57.518 36.000 2.11 2.16 35.76 2.57
397 398 8.037758 AGTTCCACTATTCAAGTTGTGATCTAG 58.962 37.037 2.11 1.60 35.76 2.43
398 399 7.907389 AGTTCCACTATTCAAGTTGTGATCTA 58.093 34.615 2.11 0.00 35.76 1.98
399 400 6.773638 AGTTCCACTATTCAAGTTGTGATCT 58.226 36.000 2.11 0.00 35.76 2.75
400 401 7.173218 TCAAGTTCCACTATTCAAGTTGTGATC 59.827 37.037 2.11 0.00 35.76 2.92
401 402 6.998074 TCAAGTTCCACTATTCAAGTTGTGAT 59.002 34.615 2.11 1.65 35.76 3.06
402 403 6.260050 GTCAAGTTCCACTATTCAAGTTGTGA 59.740 38.462 2.11 0.00 35.76 3.58
403 404 6.038161 TGTCAAGTTCCACTATTCAAGTTGTG 59.962 38.462 2.11 0.00 35.76 3.33
404 405 6.119536 TGTCAAGTTCCACTATTCAAGTTGT 58.880 36.000 2.11 0.00 35.76 3.32
405 406 6.618287 TGTCAAGTTCCACTATTCAAGTTG 57.382 37.500 0.00 0.00 35.76 3.16
406 407 6.828785 ACTTGTCAAGTTCCACTATTCAAGTT 59.171 34.615 12.62 0.00 39.04 2.66
407 408 6.357367 ACTTGTCAAGTTCCACTATTCAAGT 58.643 36.000 12.62 0.00 39.04 3.16
408 409 6.483307 TGACTTGTCAAGTTCCACTATTCAAG 59.517 38.462 19.09 0.00 43.03 3.02
409 410 6.353323 TGACTTGTCAAGTTCCACTATTCAA 58.647 36.000 19.09 0.00 43.03 2.69
410 411 5.924356 TGACTTGTCAAGTTCCACTATTCA 58.076 37.500 19.09 6.75 43.03 2.57
411 412 6.861065 TTGACTTGTCAAGTTCCACTATTC 57.139 37.500 19.09 4.28 43.03 1.75
412 413 6.238759 GCTTTGACTTGTCAAGTTCCACTATT 60.239 38.462 19.09 0.00 43.03 1.73
413 414 5.239525 GCTTTGACTTGTCAAGTTCCACTAT 59.760 40.000 19.09 0.00 43.03 2.12
414 415 4.574828 GCTTTGACTTGTCAAGTTCCACTA 59.425 41.667 19.09 1.44 43.03 2.74
415 416 3.378427 GCTTTGACTTGTCAAGTTCCACT 59.622 43.478 19.09 0.00 43.03 4.00
416 417 3.128589 TGCTTTGACTTGTCAAGTTCCAC 59.871 43.478 19.09 7.35 43.03 4.02
478 488 4.261238 CCAAAACATGCGTGTAACCTACAA 60.261 41.667 12.96 0.00 40.93 2.41
518 531 1.135603 CGCCACATGAACCAGAACATG 60.136 52.381 0.00 0.00 46.11 3.21
519 532 1.167851 CGCCACATGAACCAGAACAT 58.832 50.000 0.00 0.00 0.00 2.71
522 535 1.202758 ACTTCGCCACATGAACCAGAA 60.203 47.619 0.00 0.00 0.00 3.02
523 536 0.396435 ACTTCGCCACATGAACCAGA 59.604 50.000 0.00 0.00 0.00 3.86
525 538 1.336440 CAAACTTCGCCACATGAACCA 59.664 47.619 0.00 0.00 0.00 3.67
527 540 3.058293 TGATCAAACTTCGCCACATGAAC 60.058 43.478 0.00 0.00 0.00 3.18
529 542 2.777094 TGATCAAACTTCGCCACATGA 58.223 42.857 0.00 0.00 0.00 3.07
530 543 3.119743 ACATGATCAAACTTCGCCACATG 60.120 43.478 0.00 0.00 39.42 3.21
532 545 2.226200 CACATGATCAAACTTCGCCACA 59.774 45.455 0.00 0.00 0.00 4.17
576 589 2.363680 AGTCTGCAGTATCCAAGATCCG 59.636 50.000 14.67 0.00 0.00 4.18
586 599 7.227512 GGCATATTCTTGTTTAGTCTGCAGTAT 59.772 37.037 14.67 6.13 0.00 2.12
614 627 5.759273 TGAAAATGAAAATGTTTGGAGCCAG 59.241 36.000 0.00 0.00 0.00 4.85
638 651 6.144078 AGGTTTTGCTTTCGTTTTCTATGT 57.856 33.333 0.00 0.00 0.00 2.29
667 680 0.179200 CCTTTTACGTGCATGCGGAC 60.179 55.000 14.09 5.59 35.98 4.79
668 681 1.302383 CCCTTTTACGTGCATGCGGA 61.302 55.000 14.09 0.00 35.98 5.54
694 707 1.363744 CTCAGAGTTTCCCGTGCATC 58.636 55.000 0.00 0.00 0.00 3.91
736 749 4.749598 CCAAAAGAAAAATCGGTTCCCTTG 59.250 41.667 0.00 0.00 0.00 3.61
744 757 3.161866 TCTCCCCCAAAAGAAAAATCGG 58.838 45.455 0.00 0.00 0.00 4.18
803 816 0.685097 TCCTGGTCCTTCGTTCCTTG 59.315 55.000 0.00 0.00 0.00 3.61
838 851 2.761208 AGCCATGTATATACGGAGAGGC 59.239 50.000 18.39 18.39 39.82 4.70
861 874 0.952984 GAGAAGGCACAGGTGTCTGC 60.953 60.000 7.38 5.52 46.11 4.26
971 989 3.941836 GCGCGCCAACCTCTATGC 61.942 66.667 23.24 0.00 0.00 3.14
972 990 3.630148 CGCGCGCCAACCTCTATG 61.630 66.667 27.72 2.72 0.00 2.23
1489 1508 2.508439 GAAGACGGCGGCGATGAA 60.508 61.111 38.93 0.00 0.00 2.57
1490 1509 4.847516 CGAAGACGGCGGCGATGA 62.848 66.667 38.93 0.00 35.72 2.92
1498 1517 3.425938 CTTGCATCGCGAAGACGGC 62.426 63.158 15.24 12.77 40.15 5.68
1499 1518 2.697425 CTTGCATCGCGAAGACGG 59.303 61.111 15.24 1.47 40.15 4.79
1502 1521 0.605319 AAACCCTTGCATCGCGAAGA 60.605 50.000 15.24 0.00 0.00 2.87
1504 1523 1.578926 CAAACCCTTGCATCGCGAA 59.421 52.632 15.24 0.00 0.00 4.70
1505 1524 2.331893 CCAAACCCTTGCATCGCGA 61.332 57.895 13.09 13.09 0.00 5.87
1508 1527 0.179129 GATGCCAAACCCTTGCATCG 60.179 55.000 7.82 0.00 36.87 3.84
1510 1529 0.252375 AGGATGCCAAACCCTTGCAT 60.252 50.000 0.00 0.00 34.25 3.96
1512 1531 1.893062 GAGGATGCCAAACCCTTGC 59.107 57.895 0.00 0.00 0.00 4.01
1513 1532 1.937546 GCGAGGATGCCAAACCCTTG 61.938 60.000 0.00 0.00 35.13 3.61
1514 1533 1.678970 GCGAGGATGCCAAACCCTT 60.679 57.895 0.00 0.00 0.00 3.95
1544 1563 2.867855 GCCGTGATCCCGATAGCCA 61.868 63.158 0.00 0.00 0.00 4.75
1545 1564 2.048127 GCCGTGATCCCGATAGCC 60.048 66.667 0.00 0.00 0.00 3.93
1547 1566 2.430921 GCGCCGTGATCCCGATAG 60.431 66.667 0.00 0.00 0.00 2.08
1549 1568 4.592192 CAGCGCCGTGATCCCGAT 62.592 66.667 2.29 0.00 0.00 4.18
1553 1572 2.434185 TGAACAGCGCCGTGATCC 60.434 61.111 2.29 0.00 0.00 3.36
1562 1581 0.951040 GAACAGGTCCCTGAACAGCG 60.951 60.000 19.95 0.00 46.30 5.18
1563 1582 0.606673 GGAACAGGTCCCTGAACAGC 60.607 60.000 19.95 4.22 46.30 4.40
1564 1583 3.633361 GGAACAGGTCCCTGAACAG 57.367 57.895 19.95 0.00 46.30 3.16
1628 1647 4.065281 GCCACACGTAGTCCGCCT 62.065 66.667 0.00 0.00 41.61 5.52
1635 1654 2.506217 ACGATGCGCCACACGTAG 60.506 61.111 4.18 0.00 46.11 3.51
1636 1655 2.807470 CACGATGCGCCACACGTA 60.807 61.111 4.18 0.00 46.11 3.57
1676 1695 1.517257 CAGTAGAAGGTGAGCGCGG 60.517 63.158 8.83 0.00 0.00 6.46
1678 1697 1.811679 GCCAGTAGAAGGTGAGCGC 60.812 63.158 0.00 0.00 0.00 5.92
1681 1700 1.115467 ATCCGCCAGTAGAAGGTGAG 58.885 55.000 0.00 0.00 38.96 3.51
1682 1701 0.824109 CATCCGCCAGTAGAAGGTGA 59.176 55.000 0.00 0.00 38.96 4.02
1684 1703 1.482593 CTTCATCCGCCAGTAGAAGGT 59.517 52.381 0.00 0.00 33.77 3.50
1687 1706 2.483714 GCATCTTCATCCGCCAGTAGAA 60.484 50.000 0.00 0.00 0.00 2.10
1690 1709 0.106708 GGCATCTTCATCCGCCAGTA 59.893 55.000 0.00 0.00 44.25 2.74
1691 1710 1.153086 GGCATCTTCATCCGCCAGT 60.153 57.895 0.00 0.00 44.25 4.00
1694 1713 2.974698 CCGGCATCTTCATCCGCC 60.975 66.667 0.00 0.00 41.68 6.13
1695 1714 1.958205 CTCCGGCATCTTCATCCGC 60.958 63.158 0.00 0.00 41.68 5.54
1696 1715 0.598680 GTCTCCGGCATCTTCATCCG 60.599 60.000 0.00 0.00 42.58 4.18
1697 1716 0.598680 CGTCTCCGGCATCTTCATCC 60.599 60.000 0.00 0.00 0.00 3.51
1698 1717 2.892305 CGTCTCCGGCATCTTCATC 58.108 57.895 0.00 0.00 0.00 2.92
1720 1739 2.954868 GATGAGCGCCGTGTACCG 60.955 66.667 2.29 0.00 0.00 4.02
1721 1740 2.954868 CGATGAGCGCCGTGTACC 60.955 66.667 2.29 0.00 0.00 3.34
1732 1751 3.093278 GGCGTTCTTGGCGATGAG 58.907 61.111 0.00 0.00 0.00 2.90
1759 1778 3.499737 CTTGGACATGTCGGCCGC 61.500 66.667 23.51 16.75 0.00 6.53
1760 1779 2.819595 CCTTGGACATGTCGGCCG 60.820 66.667 22.12 22.12 0.00 6.13
1766 1785 0.250901 GTGGAGCACCTTGGACATGT 60.251 55.000 0.00 0.00 37.04 3.21
1768 1787 1.003355 CGTGGAGCACCTTGGACAT 60.003 57.895 0.71 0.00 37.04 3.06
1771 1790 2.425592 CACGTGGAGCACCTTGGA 59.574 61.111 7.95 0.00 37.04 3.53
1772 1791 2.669569 CCACGTGGAGCACCTTGG 60.670 66.667 31.31 0.00 37.39 3.61
1781 1800 0.608130 CTTGGTGATCTCCACGTGGA 59.392 55.000 34.13 34.13 46.62 4.02
1782 1801 0.391661 CCTTGGTGATCTCCACGTGG 60.392 60.000 29.26 29.26 46.62 4.94
1783 1802 0.608130 TCCTTGGTGATCTCCACGTG 59.392 55.000 16.01 9.08 46.62 4.49
1784 1803 0.898320 CTCCTTGGTGATCTCCACGT 59.102 55.000 16.01 0.00 46.62 4.49
1785 1804 0.460987 GCTCCTTGGTGATCTCCACG 60.461 60.000 16.01 13.92 46.62 4.94
1786 1805 0.615331 TGCTCCTTGGTGATCTCCAC 59.385 55.000 16.01 5.34 44.95 4.02
1789 1808 0.463474 GCCTGCTCCTTGGTGATCTC 60.463 60.000 0.00 0.00 0.00 2.75
1804 1823 4.598894 CTCCAGATCGCCGGCCTG 62.599 72.222 23.46 21.73 0.00 4.85
1808 1827 4.271816 CGGTCTCCAGATCGCCGG 62.272 72.222 0.00 0.00 42.05 6.13
1815 1834 1.639722 TGGAAATCACGGTCTCCAGA 58.360 50.000 0.00 0.00 32.97 3.86
1817 1836 1.905894 TGATGGAAATCACGGTCTCCA 59.094 47.619 0.00 0.00 42.04 3.86
1821 1840 2.678336 GGACTTGATGGAAATCACGGTC 59.322 50.000 10.22 10.22 35.11 4.79
1823 1842 2.017049 GGGACTTGATGGAAATCACGG 58.983 52.381 0.00 0.00 0.00 4.94
1824 1843 2.420022 GTGGGACTTGATGGAAATCACG 59.580 50.000 0.00 0.00 0.00 4.35
1829 1848 1.890876 CGTGTGGGACTTGATGGAAA 58.109 50.000 0.00 0.00 0.00 3.13
1830 1849 0.605319 GCGTGTGGGACTTGATGGAA 60.605 55.000 0.00 0.00 0.00 3.53
1831 1850 1.003839 GCGTGTGGGACTTGATGGA 60.004 57.895 0.00 0.00 0.00 3.41
1858 1877 2.348888 GGGAGAAGAGGCCGAACGA 61.349 63.158 0.00 0.00 0.00 3.85
1861 1880 3.075005 CCGGGAGAAGAGGCCGAA 61.075 66.667 0.00 0.00 0.00 4.30
1872 1891 4.796231 CGCACGAACTCCCGGGAG 62.796 72.222 42.92 42.92 46.91 4.30
1900 1919 4.436998 GGTGCCGACGAGGTGGAG 62.437 72.222 0.00 0.00 43.70 3.86
1919 1938 4.477975 GGAGGAGCCACGTCGACG 62.478 72.222 34.58 34.58 46.33 5.12
1921 1940 3.062466 CAGGAGGAGCCACGTCGA 61.062 66.667 0.00 0.00 40.02 4.20
1922 1941 4.135153 CCAGGAGGAGCCACGTCG 62.135 72.222 0.00 0.00 40.02 5.12
1923 1942 2.680352 TCCAGGAGGAGCCACGTC 60.680 66.667 0.00 0.00 39.61 4.34
1924 1943 2.997897 GTCCAGGAGGAGCCACGT 60.998 66.667 0.00 0.00 46.92 4.49
1925 1944 2.303549 GATGTCCAGGAGGAGCCACG 62.304 65.000 0.00 0.00 46.92 4.94
1927 1946 2.060383 CGATGTCCAGGAGGAGCCA 61.060 63.158 0.00 0.00 46.92 4.75
1931 1950 0.755698 GTAGGCGATGTCCAGGAGGA 60.756 60.000 0.00 0.00 43.21 3.71
1940 1959 0.663688 CTGCGAGTAGTAGGCGATGT 59.336 55.000 0.00 0.00 0.00 3.06
1943 1962 0.731417 GTTCTGCGAGTAGTAGGCGA 59.269 55.000 0.00 0.00 33.08 5.54
1949 1968 1.272769 GGAACAGGTTCTGCGAGTAGT 59.727 52.381 11.56 0.00 39.45 2.73
1952 1971 2.133195 TGGAACAGGTTCTGCGAGT 58.867 52.632 11.56 0.00 39.45 4.18
2465 2511 4.200283 CGAGCACGAGGAGGGAGC 62.200 72.222 0.00 0.00 42.66 4.70
2624 3214 6.363167 TCTAGGAGTAGATGGACTAGCTAC 57.637 45.833 6.15 6.15 46.22 3.58
2656 3262 4.440758 CCAAAACTAAATGCAGTGTTCACG 59.559 41.667 0.00 0.00 0.00 4.35
2715 3321 3.183237 ACGCGCTTTAATTTCTGTGAC 57.817 42.857 5.73 0.00 0.00 3.67
2716 3322 4.668177 GCTTACGCGCTTTAATTTCTGTGA 60.668 41.667 5.73 0.00 0.00 3.58
2717 3323 3.538392 GCTTACGCGCTTTAATTTCTGTG 59.462 43.478 5.73 0.00 0.00 3.66
2719 3325 4.003519 AGCTTACGCGCTTTAATTTCTG 57.996 40.909 5.73 0.00 42.32 3.02
2760 3370 5.007724 CACACCACAGTAAAGAGAAAAGGTC 59.992 44.000 0.00 0.00 0.00 3.85
2763 3373 6.677781 TTCACACCACAGTAAAGAGAAAAG 57.322 37.500 0.00 0.00 0.00 2.27
2768 3378 8.076178 CCTAATTTTTCACACCACAGTAAAGAG 58.924 37.037 0.00 0.00 0.00 2.85
2769 3379 7.558444 ACCTAATTTTTCACACCACAGTAAAGA 59.442 33.333 0.00 0.00 0.00 2.52
2770 3380 7.647715 CACCTAATTTTTCACACCACAGTAAAG 59.352 37.037 0.00 0.00 0.00 1.85
2773 3383 5.533154 CCACCTAATTTTTCACACCACAGTA 59.467 40.000 0.00 0.00 0.00 2.74
2774 3384 4.340950 CCACCTAATTTTTCACACCACAGT 59.659 41.667 0.00 0.00 0.00 3.55
2775 3385 4.795962 GCCACCTAATTTTTCACACCACAG 60.796 45.833 0.00 0.00 0.00 3.66
2776 3386 3.068873 GCCACCTAATTTTTCACACCACA 59.931 43.478 0.00 0.00 0.00 4.17
2777 3387 3.320826 AGCCACCTAATTTTTCACACCAC 59.679 43.478 0.00 0.00 0.00 4.16
2778 3388 3.320541 CAGCCACCTAATTTTTCACACCA 59.679 43.478 0.00 0.00 0.00 4.17
2779 3389 3.860754 GCAGCCACCTAATTTTTCACACC 60.861 47.826 0.00 0.00 0.00 4.16
2793 3403 2.283821 TTCCCAATGGCAGCCACC 60.284 61.111 19.10 0.00 35.80 4.61
2801 3411 4.792068 TCAGGTAAATAGCTTCCCAATGG 58.208 43.478 0.00 0.00 30.45 3.16
2828 3487 2.790433 TGTCAGAACATACCCAAAGCC 58.210 47.619 0.00 0.00 0.00 4.35
2843 3502 6.036517 GTCAAAACTGGCTAGATGTATGTCAG 59.963 42.308 3.17 0.00 0.00 3.51
2847 3506 4.271049 CGGTCAAAACTGGCTAGATGTATG 59.729 45.833 3.17 0.00 0.00 2.39
2848 3507 4.161565 TCGGTCAAAACTGGCTAGATGTAT 59.838 41.667 3.17 0.00 32.22 2.29
2863 3522 4.336889 AAGATTGAGTGACTCGGTCAAA 57.663 40.909 16.03 2.95 44.49 2.69
2884 3543 2.354510 CTCACGTTGAGCAGTTGGAAAA 59.645 45.455 0.00 0.00 37.72 2.29
2896 3555 3.151554 TGACTAGCCTTACTCACGTTGA 58.848 45.455 0.00 0.00 0.00 3.18
2897 3556 3.570926 TGACTAGCCTTACTCACGTTG 57.429 47.619 0.00 0.00 0.00 4.10
2898 3557 4.948621 ACTATGACTAGCCTTACTCACGTT 59.051 41.667 0.00 0.00 0.00 3.99
2899 3558 4.335874 CACTATGACTAGCCTTACTCACGT 59.664 45.833 0.00 0.00 0.00 4.49
2900 3559 4.261238 CCACTATGACTAGCCTTACTCACG 60.261 50.000 0.00 0.00 0.00 4.35
2901 3560 4.038162 CCCACTATGACTAGCCTTACTCAC 59.962 50.000 0.00 0.00 0.00 3.51
2902 3561 4.079385 TCCCACTATGACTAGCCTTACTCA 60.079 45.833 0.00 0.00 0.00 3.41
2903 3562 4.471548 TCCCACTATGACTAGCCTTACTC 58.528 47.826 0.00 0.00 0.00 2.59
2904 3563 4.079096 ACTCCCACTATGACTAGCCTTACT 60.079 45.833 0.00 0.00 0.00 2.24
2905 3564 4.216708 ACTCCCACTATGACTAGCCTTAC 58.783 47.826 0.00 0.00 0.00 2.34
2939 3598 5.340803 TCTTGAAGTGCGCTATGTTACTAG 58.659 41.667 9.73 0.00 0.00 2.57
2940 3599 5.319140 TCTTGAAGTGCGCTATGTTACTA 57.681 39.130 9.73 0.00 0.00 1.82
2941 3600 4.188247 TCTTGAAGTGCGCTATGTTACT 57.812 40.909 9.73 0.00 0.00 2.24
2942 3601 4.921470 TTCTTGAAGTGCGCTATGTTAC 57.079 40.909 9.73 0.00 0.00 2.50
2970 3629 8.574251 TCACATTAAATACTTGCCACATAAGT 57.426 30.769 0.00 0.00 41.06 2.24
3032 3691 4.808414 TGTAGACTCATCTTGTCTTGGG 57.192 45.455 1.67 0.00 41.45 4.12
3087 3746 7.675962 ACCTTCGTAATGCAAAGTAACATAA 57.324 32.000 0.00 0.00 0.00 1.90
3095 3754 6.963049 AGTTACTACCTTCGTAATGCAAAG 57.037 37.500 0.00 0.00 0.00 2.77
3102 3761 4.956075 CCCCCTAAGTTACTACCTTCGTAA 59.044 45.833 0.00 0.00 0.00 3.18
3105 3764 3.131755 CACCCCCTAAGTTACTACCTTCG 59.868 52.174 0.00 0.00 0.00 3.79
3106 3765 4.099633 ACACCCCCTAAGTTACTACCTTC 58.900 47.826 0.00 0.00 0.00 3.46
3153 3812 5.084519 TGCTAGGGACTTTTTCTAGTCTCA 58.915 41.667 6.44 0.00 46.11 3.27
3155 3814 6.231951 GTTTGCTAGGGACTTTTTCTAGTCT 58.768 40.000 0.00 0.00 43.26 3.24
3173 3832 1.048160 CCCACCCTGTTTGGTTTGCT 61.048 55.000 0.00 0.00 36.12 3.91
3174 3833 1.045911 TCCCACCCTGTTTGGTTTGC 61.046 55.000 0.00 0.00 36.12 3.68
3175 3834 0.750249 GTCCCACCCTGTTTGGTTTG 59.250 55.000 0.00 0.00 36.12 2.93
3179 4083 1.788229 AAAAGTCCCACCCTGTTTGG 58.212 50.000 0.00 0.00 0.00 3.28
3207 4111 6.238925 GGTGCTTCTAAGGACTTTTAGCAAAA 60.239 38.462 13.12 0.00 45.42 2.44
3208 4112 5.240844 GGTGCTTCTAAGGACTTTTAGCAAA 59.759 40.000 13.12 0.00 45.42 3.68
3209 4113 4.760204 GGTGCTTCTAAGGACTTTTAGCAA 59.240 41.667 13.12 1.75 45.42 3.91
3210 4114 4.041691 AGGTGCTTCTAAGGACTTTTAGCA 59.958 41.667 13.12 9.74 45.42 3.49
3211 4115 4.580868 AGGTGCTTCTAAGGACTTTTAGC 58.419 43.478 13.12 0.00 45.42 3.09
3214 4118 3.653352 AGGAGGTGCTTCTAAGGACTTTT 59.347 43.478 13.12 1.47 45.42 2.27
3215 4119 3.252351 AGGAGGTGCTTCTAAGGACTTT 58.748 45.455 13.12 3.63 45.42 2.66
3216 4120 2.909217 AGGAGGTGCTTCTAAGGACTT 58.091 47.619 13.12 6.52 45.42 3.01
3217 4121 2.569404 CAAGGAGGTGCTTCTAAGGACT 59.431 50.000 13.12 1.24 45.42 3.85
3218 4122 2.567615 TCAAGGAGGTGCTTCTAAGGAC 59.432 50.000 5.86 5.86 45.39 3.85
3219 4123 2.834549 CTCAAGGAGGTGCTTCTAAGGA 59.165 50.000 0.00 0.00 0.00 3.36
3220 4124 2.834549 TCTCAAGGAGGTGCTTCTAAGG 59.165 50.000 0.00 0.00 0.00 2.69
3221 4125 3.513515 ACTCTCAAGGAGGTGCTTCTAAG 59.486 47.826 0.00 0.00 45.83 2.18
3222 4126 3.511477 ACTCTCAAGGAGGTGCTTCTAA 58.489 45.455 0.00 0.00 45.83 2.10
3223 4127 3.093057 GACTCTCAAGGAGGTGCTTCTA 58.907 50.000 0.00 0.00 45.83 2.10
3224 4128 1.899142 GACTCTCAAGGAGGTGCTTCT 59.101 52.381 0.00 0.00 45.83 2.85
3225 4129 1.899142 AGACTCTCAAGGAGGTGCTTC 59.101 52.381 0.00 0.00 45.83 3.86
3226 4130 2.022718 AGACTCTCAAGGAGGTGCTT 57.977 50.000 0.00 0.00 45.83 3.91
3227 4131 2.022718 AAGACTCTCAAGGAGGTGCT 57.977 50.000 0.00 0.00 45.83 4.40
3228 4132 2.849294 AAAGACTCTCAAGGAGGTGC 57.151 50.000 0.00 0.00 45.83 5.01
3229 4133 4.708177 TGAAAAAGACTCTCAAGGAGGTG 58.292 43.478 0.00 0.00 45.83 4.00
3230 4134 5.373812 TTGAAAAAGACTCTCAAGGAGGT 57.626 39.130 0.00 0.00 45.83 3.85
3231 4135 6.699575 TTTTGAAAAAGACTCTCAAGGAGG 57.300 37.500 0.00 0.00 45.83 4.30
3232 4136 7.766283 ACTTTTTGAAAAAGACTCTCAAGGAG 58.234 34.615 30.55 6.52 46.87 3.69
3233 4137 7.148069 GGACTTTTTGAAAAAGACTCTCAAGGA 60.148 37.037 30.55 0.00 31.11 3.36
3234 4138 6.975197 GGACTTTTTGAAAAAGACTCTCAAGG 59.025 38.462 30.55 7.27 31.11 3.61
3235 4139 7.766283 AGGACTTTTTGAAAAAGACTCTCAAG 58.234 34.615 30.55 7.82 31.11 3.02
3236 4140 7.703058 AGGACTTTTTGAAAAAGACTCTCAA 57.297 32.000 30.55 0.00 0.00 3.02
3237 4141 7.499232 CCTAGGACTTTTTGAAAAAGACTCTCA 59.501 37.037 30.55 14.91 0.00 3.27
3238 4142 7.041030 CCCTAGGACTTTTTGAAAAAGACTCTC 60.041 40.741 30.55 19.27 0.00 3.20
3239 4143 6.773200 CCCTAGGACTTTTTGAAAAAGACTCT 59.227 38.462 30.55 23.56 0.00 3.24
3240 4144 6.771267 TCCCTAGGACTTTTTGAAAAAGACTC 59.229 38.462 30.55 20.15 0.00 3.36
3241 4145 6.669631 TCCCTAGGACTTTTTGAAAAAGACT 58.330 36.000 30.55 26.69 0.00 3.24
3242 4146 6.954487 TCCCTAGGACTTTTTGAAAAAGAC 57.046 37.500 30.55 24.86 0.00 3.01
3278 4182 4.527038 TGGTGTTTGGTTCTCTAGTCCTAG 59.473 45.833 0.00 0.00 34.56 3.02
3286 4190 3.714798 TCTAAGGTGGTGTTTGGTTCTCT 59.285 43.478 0.00 0.00 0.00 3.10
3287 4191 3.813724 GTCTAAGGTGGTGTTTGGTTCTC 59.186 47.826 0.00 0.00 0.00 2.87
3288 4192 3.458487 AGTCTAAGGTGGTGTTTGGTTCT 59.542 43.478 0.00 0.00 0.00 3.01
3299 4203 3.195610 TGCATGACACTAGTCTAAGGTGG 59.804 47.826 0.00 0.00 45.20 4.61
3300 4204 4.456280 TGCATGACACTAGTCTAAGGTG 57.544 45.455 0.00 0.00 45.20 4.00
3301 4205 6.551227 TCATATGCATGACACTAGTCTAAGGT 59.449 38.462 10.16 0.00 45.20 3.50
3320 4224 8.569641 GGGAGTAACTTAGACTAGTGTCATATG 58.430 40.741 0.00 0.00 45.20 1.78
3334 4238 4.960469 TGGTCATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
3379 4283 0.393944 CGGGGAAAACTAGGGGAAGC 60.394 60.000 0.00 0.00 0.00 3.86
3389 4293 3.129813 AGAACAACACTTTCGGGGAAAAC 59.870 43.478 0.00 0.00 30.84 2.43
3410 4314 1.370437 CCCATGCTCTCGGGATCAG 59.630 63.158 0.00 0.00 46.34 2.90
3416 4320 0.742281 CTGTTCACCCATGCTCTCGG 60.742 60.000 0.00 0.00 0.00 4.63
3424 4328 4.105697 TCCCTCTTTTTACTGTTCACCCAT 59.894 41.667 0.00 0.00 0.00 4.00
3425 4329 3.460340 TCCCTCTTTTTACTGTTCACCCA 59.540 43.478 0.00 0.00 0.00 4.51
3478 4382 6.516739 TTTGTCAATGTTTGGCCGAATATA 57.483 33.333 14.86 2.87 33.37 0.86
3518 4422 1.168714 GCCACCTGGTGATGAAACTC 58.831 55.000 27.94 3.06 35.23 3.01
3532 4436 4.685924 CCATGTTTTCTATGAATGCCACC 58.314 43.478 0.00 0.00 0.00 4.61
3536 4440 6.724694 TTTTGCCATGTTTTCTATGAATGC 57.275 33.333 0.00 0.00 0.00 3.56
3542 4446 9.558396 TTGATTTCTTTTTGCCATGTTTTCTAT 57.442 25.926 0.00 0.00 0.00 1.98
3544 4448 7.862512 TTGATTTCTTTTTGCCATGTTTTCT 57.137 28.000 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.