Multiple sequence alignment - TraesCS5A01G502300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G502300 chr5A 100.000 3251 0 0 1 3251 667203333 667200083 0.000000e+00 6004.0
1 TraesCS5A01G502300 chr4D 88.753 2774 193 54 561 3251 486924330 486921593 0.000000e+00 3284.0
2 TraesCS5A01G502300 chr4D 81.667 420 65 11 2575 2986 419308169 419308584 4.020000e-89 339.0
3 TraesCS5A01G502300 chr4D 81.710 421 63 13 2575 2986 505233416 505233831 4.020000e-89 339.0
4 TraesCS5A01G502300 chr4D 84.713 157 22 2 8 162 495977246 495977090 4.340000e-34 156.0
5 TraesCS5A01G502300 chr4B 88.271 2447 184 56 854 3251 621680205 621677813 0.000000e+00 2833.0
6 TraesCS5A01G502300 chr4B 94.186 344 15 3 517 860 621681812 621681474 1.340000e-143 520.0
7 TraesCS5A01G502300 chr4B 85.987 157 17 5 1 153 424285389 424285234 2.600000e-36 163.0
8 TraesCS5A01G502300 chr4B 97.701 87 2 0 160 246 621681894 621681808 2.020000e-32 150.0
9 TraesCS5A01G502300 chr1B 93.214 280 18 1 243 521 482197832 482197553 8.390000e-111 411.0
10 TraesCS5A01G502300 chr3A 93.455 275 16 2 246 519 423678834 423678561 1.090000e-109 407.0
11 TraesCS5A01G502300 chr3B 92.281 285 20 2 238 521 813141304 813141021 1.400000e-108 403.0
12 TraesCS5A01G502300 chr3B 92.446 278 21 0 244 521 825589607 825589330 6.540000e-107 398.0
13 TraesCS5A01G502300 chr6B 92.254 284 20 2 244 526 218975637 218975355 5.050000e-108 401.0
14 TraesCS5A01G502300 chr5B 92.473 279 19 2 244 521 9012082 9012359 6.540000e-107 398.0
15 TraesCS5A01G502300 chr5B 92.115 279 22 0 241 519 253366348 253366070 8.450000e-106 394.0
16 TraesCS5A01G502300 chr5B 81.429 420 66 11 2575 2986 63282159 63281744 1.870000e-87 333.0
17 TraesCS5A01G502300 chr1A 91.815 281 23 0 241 521 554825135 554825415 3.040000e-105 392.0
18 TraesCS5A01G502300 chr1A 82.407 432 65 9 2560 2983 314485780 314486208 1.840000e-97 366.0
19 TraesCS5A01G502300 chr1A 86.335 161 19 2 4 161 537135085 537134925 4.310000e-39 172.0
20 TraesCS5A01G502300 chr2D 91.844 282 19 3 240 519 170627868 170628147 1.090000e-104 390.0
21 TraesCS5A01G502300 chr2D 79.832 119 19 4 3016 3132 558117248 558117363 7.480000e-12 82.4
22 TraesCS5A01G502300 chr7B 84.051 395 57 4 2560 2948 221459770 221460164 3.060000e-100 375.0
23 TraesCS5A01G502300 chr6D 81.667 420 65 11 2575 2986 432917553 432917138 4.020000e-89 339.0
24 TraesCS5A01G502300 chr6D 86.897 145 17 2 8 150 263037599 263037455 9.330000e-36 161.0
25 TraesCS5A01G502300 chr3D 81.667 420 65 11 2575 2986 3363008 3363423 4.020000e-89 339.0
26 TraesCS5A01G502300 chr3D 86.093 151 18 3 1 148 532084711 532084861 3.360000e-35 159.0
27 TraesCS5A01G502300 chr1D 81.667 420 65 11 2575 2986 59878372 59877957 4.020000e-89 339.0
28 TraesCS5A01G502300 chrUn 81.429 420 66 11 2575 2986 2002271 2002686 1.870000e-87 333.0
29 TraesCS5A01G502300 chr2B 87.417 151 16 2 1 148 214598075 214597925 1.550000e-38 171.0
30 TraesCS5A01G502300 chr2B 84.337 166 21 5 1 162 568578865 568578701 1.210000e-34 158.0
31 TraesCS5A01G502300 chr2B 85.906 149 17 4 3 148 210461784 210461931 4.340000e-34 156.0
32 TraesCS5A01G502300 chr7D 85.987 157 17 4 1 153 522978651 522978496 2.600000e-36 163.0
33 TraesCS5A01G502300 chr7D 94.737 38 2 0 3095 3132 159875011 159875048 3.500000e-05 60.2
34 TraesCS5A01G502300 chr7A 94.737 38 2 0 3095 3132 158378329 158378292 3.500000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G502300 chr5A 667200083 667203333 3250 True 6004.000000 6004 100.000 1 3251 1 chr5A.!!$R1 3250
1 TraesCS5A01G502300 chr4D 486921593 486924330 2737 True 3284.000000 3284 88.753 561 3251 1 chr4D.!!$R1 2690
2 TraesCS5A01G502300 chr4B 621677813 621681894 4081 True 1167.666667 2833 93.386 160 3251 3 chr4B.!!$R2 3091

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.034896 AGGGACAATGACGGTGACAC 59.965 55.0 0.0 0.0 0.0 3.67 F
1314 2609 0.037877 CATCCCTGCCATCTCCATCC 59.962 60.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1388 2691 0.039617 GATCCTGCAGATCGAGACGG 60.040 60.0 17.39 0.00 42.06 4.79 R
2976 4351 0.597568 CCATTGGAAGAGTTTGCGCA 59.402 50.0 5.66 5.66 0.00 6.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.727387 CCGGTGAGGAGGGACAAT 58.273 61.111 0.00 0.00 45.00 2.71
18 19 1.221840 CCGGTGAGGAGGGACAATG 59.778 63.158 0.00 0.00 45.00 2.82
19 20 1.264749 CCGGTGAGGAGGGACAATGA 61.265 60.000 0.00 0.00 45.00 2.57
20 21 0.108138 CGGTGAGGAGGGACAATGAC 60.108 60.000 0.00 0.00 0.00 3.06
21 22 0.108138 GGTGAGGAGGGACAATGACG 60.108 60.000 0.00 0.00 0.00 4.35
22 23 0.108138 GTGAGGAGGGACAATGACGG 60.108 60.000 0.00 0.00 0.00 4.79
23 24 0.544357 TGAGGAGGGACAATGACGGT 60.544 55.000 0.00 0.00 0.00 4.83
24 25 0.108138 GAGGAGGGACAATGACGGTG 60.108 60.000 0.00 0.00 0.00 4.94
25 26 0.544357 AGGAGGGACAATGACGGTGA 60.544 55.000 0.00 0.00 0.00 4.02
26 27 0.391263 GGAGGGACAATGACGGTGAC 60.391 60.000 0.00 0.00 0.00 3.67
27 28 0.320374 GAGGGACAATGACGGTGACA 59.680 55.000 0.00 0.00 0.00 3.58
28 29 0.034896 AGGGACAATGACGGTGACAC 59.965 55.000 0.00 0.00 0.00 3.67
29 30 0.953960 GGGACAATGACGGTGACACC 60.954 60.000 15.13 15.13 34.05 4.16
30 31 0.034896 GGACAATGACGGTGACACCT 59.965 55.000 22.14 9.48 35.66 4.00
31 32 1.542547 GGACAATGACGGTGACACCTT 60.543 52.381 22.14 13.54 35.66 3.50
32 33 1.798813 GACAATGACGGTGACACCTTC 59.201 52.381 21.28 21.28 37.08 3.46
33 34 0.790207 CAATGACGGTGACACCTTCG 59.210 55.000 22.18 12.66 39.20 3.79
34 35 0.320421 AATGACGGTGACACCTTCGG 60.320 55.000 22.18 10.48 39.20 4.30
35 36 2.737376 GACGGTGACACCTTCGGC 60.737 66.667 22.14 7.92 35.66 5.54
36 37 3.222354 GACGGTGACACCTTCGGCT 62.222 63.158 22.14 0.00 35.66 5.52
37 38 2.432628 CGGTGACACCTTCGGCTC 60.433 66.667 22.14 0.00 35.66 4.70
38 39 2.432628 GGTGACACCTTCGGCTCG 60.433 66.667 17.84 0.00 34.73 5.03
39 40 3.112709 GTGACACCTTCGGCTCGC 61.113 66.667 0.00 0.00 0.00 5.03
40 41 3.303135 TGACACCTTCGGCTCGCT 61.303 61.111 0.00 0.00 0.00 4.93
41 42 2.048127 GACACCTTCGGCTCGCTT 60.048 61.111 0.00 0.00 0.00 4.68
42 43 2.048127 ACACCTTCGGCTCGCTTC 60.048 61.111 0.00 0.00 0.00 3.86
43 44 2.048222 CACCTTCGGCTCGCTTCA 60.048 61.111 0.00 0.00 0.00 3.02
44 45 2.097038 CACCTTCGGCTCGCTTCAG 61.097 63.158 0.00 0.00 0.00 3.02
45 46 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
46 47 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
47 48 1.373497 CTTCGGCTCGCTTCAGTGT 60.373 57.895 0.00 0.00 0.00 3.55
48 49 0.946221 CTTCGGCTCGCTTCAGTGTT 60.946 55.000 0.00 0.00 0.00 3.32
49 50 0.531974 TTCGGCTCGCTTCAGTGTTT 60.532 50.000 0.00 0.00 0.00 2.83
50 51 0.315886 TCGGCTCGCTTCAGTGTTTA 59.684 50.000 0.00 0.00 0.00 2.01
51 52 1.067142 TCGGCTCGCTTCAGTGTTTAT 60.067 47.619 0.00 0.00 0.00 1.40
52 53 2.164827 TCGGCTCGCTTCAGTGTTTATA 59.835 45.455 0.00 0.00 0.00 0.98
53 54 2.535984 CGGCTCGCTTCAGTGTTTATAG 59.464 50.000 0.00 0.00 0.00 1.31
54 55 3.522553 GGCTCGCTTCAGTGTTTATAGT 58.477 45.455 0.00 0.00 0.00 2.12
55 56 3.552294 GGCTCGCTTCAGTGTTTATAGTC 59.448 47.826 0.00 0.00 0.00 2.59
56 57 3.240861 GCTCGCTTCAGTGTTTATAGTCG 59.759 47.826 0.00 0.00 0.00 4.18
57 58 4.413087 CTCGCTTCAGTGTTTATAGTCGT 58.587 43.478 0.00 0.00 0.00 4.34
58 59 4.409570 TCGCTTCAGTGTTTATAGTCGTC 58.590 43.478 0.00 0.00 0.00 4.20
59 60 3.237660 CGCTTCAGTGTTTATAGTCGTCG 59.762 47.826 0.00 0.00 0.00 5.12
60 61 4.164294 GCTTCAGTGTTTATAGTCGTCGT 58.836 43.478 0.00 0.00 0.00 4.34
61 62 4.620184 GCTTCAGTGTTTATAGTCGTCGTT 59.380 41.667 0.00 0.00 0.00 3.85
62 63 5.796935 GCTTCAGTGTTTATAGTCGTCGTTA 59.203 40.000 0.00 0.00 0.00 3.18
63 64 6.021626 GCTTCAGTGTTTATAGTCGTCGTTAG 60.022 42.308 0.00 0.00 0.00 2.34
64 65 5.872635 TCAGTGTTTATAGTCGTCGTTAGG 58.127 41.667 0.00 0.00 0.00 2.69
65 66 5.412594 TCAGTGTTTATAGTCGTCGTTAGGT 59.587 40.000 0.00 0.00 0.00 3.08
66 67 5.510674 CAGTGTTTATAGTCGTCGTTAGGTG 59.489 44.000 0.00 0.00 0.00 4.00
67 68 4.795278 GTGTTTATAGTCGTCGTTAGGTGG 59.205 45.833 0.00 0.00 0.00 4.61
68 69 4.458989 TGTTTATAGTCGTCGTTAGGTGGT 59.541 41.667 0.00 0.00 0.00 4.16
69 70 4.882671 TTATAGTCGTCGTTAGGTGGTC 57.117 45.455 0.00 0.00 0.00 4.02
70 71 2.479566 TAGTCGTCGTTAGGTGGTCT 57.520 50.000 0.00 0.00 0.00 3.85
71 72 2.479566 AGTCGTCGTTAGGTGGTCTA 57.520 50.000 0.00 0.00 0.00 2.59
72 73 2.996631 AGTCGTCGTTAGGTGGTCTAT 58.003 47.619 0.00 0.00 0.00 1.98
73 74 2.681848 AGTCGTCGTTAGGTGGTCTATG 59.318 50.000 0.00 0.00 0.00 2.23
74 75 2.679837 GTCGTCGTTAGGTGGTCTATGA 59.320 50.000 0.00 0.00 0.00 2.15
75 76 3.127548 GTCGTCGTTAGGTGGTCTATGAA 59.872 47.826 0.00 0.00 0.00 2.57
76 77 3.949754 TCGTCGTTAGGTGGTCTATGAAT 59.050 43.478 0.00 0.00 0.00 2.57
77 78 4.400251 TCGTCGTTAGGTGGTCTATGAATT 59.600 41.667 0.00 0.00 0.00 2.17
78 79 5.105635 TCGTCGTTAGGTGGTCTATGAATTT 60.106 40.000 0.00 0.00 0.00 1.82
79 80 5.005394 CGTCGTTAGGTGGTCTATGAATTTG 59.995 44.000 0.00 0.00 0.00 2.32
80 81 5.293569 GTCGTTAGGTGGTCTATGAATTTGG 59.706 44.000 0.00 0.00 0.00 3.28
81 82 5.188163 TCGTTAGGTGGTCTATGAATTTGGA 59.812 40.000 0.00 0.00 0.00 3.53
82 83 6.055588 CGTTAGGTGGTCTATGAATTTGGAT 58.944 40.000 0.00 0.00 0.00 3.41
83 84 6.017934 CGTTAGGTGGTCTATGAATTTGGATG 60.018 42.308 0.00 0.00 0.00 3.51
84 85 5.456921 AGGTGGTCTATGAATTTGGATGT 57.543 39.130 0.00 0.00 0.00 3.06
85 86 6.575244 AGGTGGTCTATGAATTTGGATGTA 57.425 37.500 0.00 0.00 0.00 2.29
86 87 6.969043 AGGTGGTCTATGAATTTGGATGTAA 58.031 36.000 0.00 0.00 0.00 2.41
87 88 7.586349 AGGTGGTCTATGAATTTGGATGTAAT 58.414 34.615 0.00 0.00 0.00 1.89
88 89 8.061304 AGGTGGTCTATGAATTTGGATGTAATT 58.939 33.333 0.00 0.00 0.00 1.40
89 90 8.695456 GGTGGTCTATGAATTTGGATGTAATTT 58.305 33.333 0.00 0.00 0.00 1.82
90 91 9.736023 GTGGTCTATGAATTTGGATGTAATTTC 57.264 33.333 0.00 0.00 0.00 2.17
91 92 9.699410 TGGTCTATGAATTTGGATGTAATTTCT 57.301 29.630 0.00 0.00 0.00 2.52
112 113 8.851541 TTTCTATTATTTTAGGTGTTCGGTGT 57.148 30.769 0.00 0.00 0.00 4.16
113 114 9.941325 TTTCTATTATTTTAGGTGTTCGGTGTA 57.059 29.630 0.00 0.00 0.00 2.90
114 115 8.931385 TCTATTATTTTAGGTGTTCGGTGTAC 57.069 34.615 0.00 0.00 0.00 2.90
115 116 8.752187 TCTATTATTTTAGGTGTTCGGTGTACT 58.248 33.333 0.00 0.00 0.00 2.73
116 117 7.605410 ATTATTTTAGGTGTTCGGTGTACTG 57.395 36.000 0.00 0.00 0.00 2.74
117 118 2.443887 TTAGGTGTTCGGTGTACTGC 57.556 50.000 0.00 0.00 0.00 4.40
118 119 0.604578 TAGGTGTTCGGTGTACTGCC 59.395 55.000 0.00 0.00 0.00 4.85
119 120 1.070105 GGTGTTCGGTGTACTGCCA 59.930 57.895 7.60 0.00 0.00 4.92
120 121 0.321298 GGTGTTCGGTGTACTGCCAT 60.321 55.000 7.60 0.00 0.00 4.40
121 122 0.796312 GTGTTCGGTGTACTGCCATG 59.204 55.000 7.60 0.00 0.00 3.66
122 123 0.682292 TGTTCGGTGTACTGCCATGA 59.318 50.000 0.00 0.00 0.00 3.07
123 124 1.277842 TGTTCGGTGTACTGCCATGAT 59.722 47.619 0.00 0.00 0.00 2.45
124 125 2.290008 TGTTCGGTGTACTGCCATGATT 60.290 45.455 0.00 0.00 0.00 2.57
125 126 3.055747 TGTTCGGTGTACTGCCATGATTA 60.056 43.478 0.00 0.00 0.00 1.75
126 127 3.897141 TCGGTGTACTGCCATGATTAA 57.103 42.857 0.00 0.00 0.00 1.40
127 128 4.209307 TCGGTGTACTGCCATGATTAAA 57.791 40.909 0.00 0.00 0.00 1.52
128 129 4.188462 TCGGTGTACTGCCATGATTAAAG 58.812 43.478 0.00 0.00 0.00 1.85
129 130 4.081365 TCGGTGTACTGCCATGATTAAAGA 60.081 41.667 0.00 0.00 0.00 2.52
130 131 4.816385 CGGTGTACTGCCATGATTAAAGAT 59.184 41.667 0.00 0.00 0.00 2.40
131 132 5.277490 CGGTGTACTGCCATGATTAAAGATG 60.277 44.000 0.00 0.00 0.00 2.90
132 133 5.822519 GGTGTACTGCCATGATTAAAGATGA 59.177 40.000 0.00 0.00 0.00 2.92
133 134 6.318648 GGTGTACTGCCATGATTAAAGATGAA 59.681 38.462 0.00 0.00 0.00 2.57
134 135 7.013655 GGTGTACTGCCATGATTAAAGATGAAT 59.986 37.037 0.00 0.00 0.00 2.57
135 136 9.056005 GTGTACTGCCATGATTAAAGATGAATA 57.944 33.333 0.00 0.00 0.00 1.75
136 137 9.276590 TGTACTGCCATGATTAAAGATGAATAG 57.723 33.333 0.00 0.00 0.00 1.73
137 138 9.494271 GTACTGCCATGATTAAAGATGAATAGA 57.506 33.333 0.00 0.00 0.00 1.98
139 140 9.228949 ACTGCCATGATTAAAGATGAATAGATC 57.771 33.333 0.00 0.00 0.00 2.75
140 141 8.260270 TGCCATGATTAAAGATGAATAGATCG 57.740 34.615 0.00 0.00 0.00 3.69
141 142 8.096414 TGCCATGATTAAAGATGAATAGATCGA 58.904 33.333 0.00 0.00 0.00 3.59
142 143 8.939929 GCCATGATTAAAGATGAATAGATCGAA 58.060 33.333 0.00 0.00 0.00 3.71
152 153 8.346476 AGATGAATAGATCGAAAGTTTTCTCG 57.654 34.615 0.00 0.00 35.07 4.04
153 154 6.887376 TGAATAGATCGAAAGTTTTCTCGG 57.113 37.500 0.00 0.00 35.76 4.63
154 155 5.810587 TGAATAGATCGAAAGTTTTCTCGGG 59.189 40.000 0.00 0.00 35.76 5.14
155 156 2.973945 AGATCGAAAGTTTTCTCGGGG 58.026 47.619 0.00 0.00 35.76 5.73
156 157 2.565834 AGATCGAAAGTTTTCTCGGGGA 59.434 45.455 0.00 0.00 35.76 4.81
157 158 2.914695 TCGAAAGTTTTCTCGGGGAA 57.085 45.000 3.40 0.00 35.76 3.97
158 159 3.196939 TCGAAAGTTTTCTCGGGGAAA 57.803 42.857 0.00 0.00 41.58 3.13
219 220 6.670695 TCTACTATTAAGCATGCAGATCCA 57.329 37.500 21.98 0.00 0.00 3.41
243 244 0.108585 AATCTGTGTCGCAACCACCT 59.891 50.000 0.00 0.00 31.71 4.00
244 245 0.320771 ATCTGTGTCGCAACCACCTC 60.321 55.000 0.00 0.00 31.71 3.85
245 246 1.227527 CTGTGTCGCAACCACCTCA 60.228 57.895 0.00 0.00 31.71 3.86
246 247 1.224069 CTGTGTCGCAACCACCTCAG 61.224 60.000 0.00 0.00 31.71 3.35
247 248 1.961277 GTGTCGCAACCACCTCAGG 60.961 63.158 0.00 0.00 0.00 3.86
248 249 2.358737 GTCGCAACCACCTCAGGG 60.359 66.667 0.00 0.00 38.88 4.45
249 250 4.329545 TCGCAACCACCTCAGGGC 62.330 66.667 0.00 0.00 35.63 5.19
250 251 4.641645 CGCAACCACCTCAGGGCA 62.642 66.667 0.00 0.00 35.63 5.36
251 252 2.036256 GCAACCACCTCAGGGCAT 59.964 61.111 0.00 0.00 35.63 4.40
252 253 2.048603 GCAACCACCTCAGGGCATC 61.049 63.158 0.00 0.00 35.63 3.91
253 254 1.687612 CAACCACCTCAGGGCATCT 59.312 57.895 0.00 0.00 35.63 2.90
254 255 0.911769 CAACCACCTCAGGGCATCTA 59.088 55.000 0.00 0.00 35.63 1.98
255 256 0.912486 AACCACCTCAGGGCATCTAC 59.088 55.000 0.00 0.00 35.63 2.59
256 257 0.252696 ACCACCTCAGGGCATCTACA 60.253 55.000 0.00 0.00 35.63 2.74
257 258 0.911769 CCACCTCAGGGCATCTACAA 59.088 55.000 0.00 0.00 35.63 2.41
258 259 1.492176 CCACCTCAGGGCATCTACAAT 59.508 52.381 0.00 0.00 35.63 2.71
259 260 2.569059 CACCTCAGGGCATCTACAATG 58.431 52.381 0.00 0.00 35.63 2.82
260 261 1.492176 ACCTCAGGGCATCTACAATGG 59.508 52.381 0.00 0.00 35.63 3.16
261 262 1.492176 CCTCAGGGCATCTACAATGGT 59.508 52.381 0.00 0.00 0.00 3.55
262 263 2.569059 CTCAGGGCATCTACAATGGTG 58.431 52.381 0.00 0.00 0.00 4.17
263 264 1.915489 TCAGGGCATCTACAATGGTGT 59.085 47.619 0.00 0.00 42.09 4.16
264 265 2.308570 TCAGGGCATCTACAATGGTGTT 59.691 45.455 0.00 0.00 39.30 3.32
265 266 3.521531 TCAGGGCATCTACAATGGTGTTA 59.478 43.478 0.00 0.00 39.30 2.41
266 267 4.165950 TCAGGGCATCTACAATGGTGTTAT 59.834 41.667 0.00 0.00 39.30 1.89
267 268 4.516698 CAGGGCATCTACAATGGTGTTATC 59.483 45.833 0.00 0.00 39.30 1.75
268 269 4.413520 AGGGCATCTACAATGGTGTTATCT 59.586 41.667 0.00 0.00 39.30 1.98
269 270 5.103940 AGGGCATCTACAATGGTGTTATCTT 60.104 40.000 0.00 0.00 39.30 2.40
270 271 6.101150 AGGGCATCTACAATGGTGTTATCTTA 59.899 38.462 0.00 0.00 39.30 2.10
271 272 6.428159 GGGCATCTACAATGGTGTTATCTTAG 59.572 42.308 0.00 0.00 39.30 2.18
272 273 6.073003 GGCATCTACAATGGTGTTATCTTAGC 60.073 42.308 0.00 0.00 39.30 3.09
273 274 6.483307 GCATCTACAATGGTGTTATCTTAGCA 59.517 38.462 0.00 0.00 39.30 3.49
274 275 7.307632 GCATCTACAATGGTGTTATCTTAGCAG 60.308 40.741 0.00 0.00 39.30 4.24
275 276 7.182817 TCTACAATGGTGTTATCTTAGCAGT 57.817 36.000 0.00 0.00 39.30 4.40
276 277 7.041721 TCTACAATGGTGTTATCTTAGCAGTG 58.958 38.462 0.00 0.00 43.46 3.66
277 278 4.396166 ACAATGGTGTTATCTTAGCAGTGC 59.604 41.667 7.13 7.13 42.14 4.40
278 279 2.985896 TGGTGTTATCTTAGCAGTGCC 58.014 47.619 12.58 0.00 0.00 5.01
279 280 2.304470 TGGTGTTATCTTAGCAGTGCCA 59.696 45.455 12.58 0.00 0.00 4.92
280 281 3.054434 TGGTGTTATCTTAGCAGTGCCAT 60.054 43.478 12.58 1.55 0.00 4.40
281 282 3.313526 GGTGTTATCTTAGCAGTGCCATG 59.686 47.826 12.58 0.00 0.00 3.66
282 283 3.941483 GTGTTATCTTAGCAGTGCCATGT 59.059 43.478 12.58 0.00 0.00 3.21
283 284 5.116180 GTGTTATCTTAGCAGTGCCATGTA 58.884 41.667 12.58 0.00 0.00 2.29
284 285 5.235186 GTGTTATCTTAGCAGTGCCATGTAG 59.765 44.000 12.58 2.45 0.00 2.74
285 286 2.988010 TCTTAGCAGTGCCATGTAGG 57.012 50.000 12.58 0.00 41.84 3.18
286 287 2.466846 TCTTAGCAGTGCCATGTAGGA 58.533 47.619 12.58 0.39 41.22 2.94
287 288 3.041211 TCTTAGCAGTGCCATGTAGGAT 58.959 45.455 12.58 0.00 41.22 3.24
288 289 4.223144 TCTTAGCAGTGCCATGTAGGATA 58.777 43.478 12.58 0.00 41.22 2.59
289 290 4.653801 TCTTAGCAGTGCCATGTAGGATAA 59.346 41.667 12.58 0.00 41.22 1.75
290 291 3.931907 AGCAGTGCCATGTAGGATAAA 57.068 42.857 12.58 0.00 41.22 1.40
291 292 4.443978 AGCAGTGCCATGTAGGATAAAT 57.556 40.909 12.58 0.00 41.22 1.40
292 293 4.139786 AGCAGTGCCATGTAGGATAAATG 58.860 43.478 12.58 0.00 41.22 2.32
293 294 4.136796 GCAGTGCCATGTAGGATAAATGA 58.863 43.478 2.85 0.00 38.63 2.57
294 295 4.763793 GCAGTGCCATGTAGGATAAATGAT 59.236 41.667 2.85 0.00 38.63 2.45
295 296 5.335426 GCAGTGCCATGTAGGATAAATGATG 60.335 44.000 2.85 0.00 38.63 3.07
296 297 5.999600 CAGTGCCATGTAGGATAAATGATGA 59.000 40.000 0.00 0.00 38.63 2.92
297 298 6.148976 CAGTGCCATGTAGGATAAATGATGAG 59.851 42.308 0.00 0.00 38.63 2.90
298 299 5.413833 GTGCCATGTAGGATAAATGATGAGG 59.586 44.000 0.00 0.00 38.63 3.86
299 300 5.073554 TGCCATGTAGGATAAATGATGAGGT 59.926 40.000 0.00 0.00 38.63 3.85
300 301 5.413833 GCCATGTAGGATAAATGATGAGGTG 59.586 44.000 0.00 0.00 38.63 4.00
301 302 5.942236 CCATGTAGGATAAATGATGAGGTGG 59.058 44.000 0.00 0.00 38.63 4.61
302 303 6.239973 CCATGTAGGATAAATGATGAGGTGGA 60.240 42.308 0.00 0.00 38.63 4.02
303 304 6.425210 TGTAGGATAAATGATGAGGTGGAG 57.575 41.667 0.00 0.00 0.00 3.86
304 305 4.989875 AGGATAAATGATGAGGTGGAGG 57.010 45.455 0.00 0.00 0.00 4.30
305 306 4.570926 AGGATAAATGATGAGGTGGAGGA 58.429 43.478 0.00 0.00 0.00 3.71
306 307 4.596643 AGGATAAATGATGAGGTGGAGGAG 59.403 45.833 0.00 0.00 0.00 3.69
307 308 4.594920 GGATAAATGATGAGGTGGAGGAGA 59.405 45.833 0.00 0.00 0.00 3.71
308 309 5.279910 GGATAAATGATGAGGTGGAGGAGAG 60.280 48.000 0.00 0.00 0.00 3.20
309 310 3.411454 AATGATGAGGTGGAGGAGAGA 57.589 47.619 0.00 0.00 0.00 3.10
310 311 2.450867 TGATGAGGTGGAGGAGAGAG 57.549 55.000 0.00 0.00 0.00 3.20
311 312 1.925959 TGATGAGGTGGAGGAGAGAGA 59.074 52.381 0.00 0.00 0.00 3.10
312 313 2.313041 TGATGAGGTGGAGGAGAGAGAA 59.687 50.000 0.00 0.00 0.00 2.87
313 314 3.052262 TGATGAGGTGGAGGAGAGAGAAT 60.052 47.826 0.00 0.00 0.00 2.40
314 315 3.481559 TGAGGTGGAGGAGAGAGAATT 57.518 47.619 0.00 0.00 0.00 2.17
315 316 3.370104 TGAGGTGGAGGAGAGAGAATTC 58.630 50.000 0.00 0.00 0.00 2.17
316 317 3.245766 TGAGGTGGAGGAGAGAGAATTCA 60.246 47.826 8.44 0.00 0.00 2.57
317 318 3.966665 GAGGTGGAGGAGAGAGAATTCAT 59.033 47.826 8.44 0.00 0.00 2.57
318 319 5.144100 GAGGTGGAGGAGAGAGAATTCATA 58.856 45.833 8.44 0.00 0.00 2.15
319 320 5.533112 AGGTGGAGGAGAGAGAATTCATAA 58.467 41.667 8.44 0.00 0.00 1.90
320 321 5.602145 AGGTGGAGGAGAGAGAATTCATAAG 59.398 44.000 8.44 0.00 0.00 1.73
321 322 5.600484 GGTGGAGGAGAGAGAATTCATAAGA 59.400 44.000 8.44 0.00 0.00 2.10
322 323 6.098982 GGTGGAGGAGAGAGAATTCATAAGAA 59.901 42.308 8.44 0.00 38.31 2.52
323 324 7.365117 GGTGGAGGAGAGAGAATTCATAAGAAA 60.365 40.741 8.44 0.00 37.29 2.52
324 325 8.043710 GTGGAGGAGAGAGAATTCATAAGAAAA 58.956 37.037 8.44 0.00 37.29 2.29
325 326 8.263640 TGGAGGAGAGAGAATTCATAAGAAAAG 58.736 37.037 8.44 0.00 37.29 2.27
326 327 8.482128 GGAGGAGAGAGAATTCATAAGAAAAGA 58.518 37.037 8.44 0.00 37.29 2.52
327 328 9.313118 GAGGAGAGAGAATTCATAAGAAAAGAC 57.687 37.037 8.44 0.00 37.29 3.01
328 329 9.045745 AGGAGAGAGAATTCATAAGAAAAGACT 57.954 33.333 8.44 0.00 37.29 3.24
329 330 9.665719 GGAGAGAGAATTCATAAGAAAAGACTT 57.334 33.333 8.44 0.00 37.29 3.01
339 340 9.838339 TTCATAAGAAAAGACTTGTCTTCTCTT 57.162 29.630 25.61 25.61 39.50 2.85
371 372 8.945057 AGAAAAGACAAGAGATGATCTTTTAGC 58.055 33.333 10.01 0.00 46.49 3.09
372 373 8.627208 AAAAGACAAGAGATGATCTTTTAGCA 57.373 30.769 8.63 0.00 46.49 3.49
373 374 8.804912 AAAGACAAGAGATGATCTTTTAGCAT 57.195 30.769 0.00 0.00 46.49 3.79
374 375 9.896645 AAAGACAAGAGATGATCTTTTAGCATA 57.103 29.630 0.00 0.00 46.49 3.14
375 376 9.896645 AAGACAAGAGATGATCTTTTAGCATAA 57.103 29.630 0.00 0.00 46.49 1.90
386 387 9.494271 TGATCTTTTAGCATAATATGTCTCACC 57.506 33.333 1.92 0.00 0.00 4.02
387 388 9.494271 GATCTTTTAGCATAATATGTCTCACCA 57.506 33.333 1.92 0.00 0.00 4.17
389 390 9.276590 TCTTTTAGCATAATATGTCTCACCATG 57.723 33.333 1.92 0.00 0.00 3.66
390 391 8.978874 TTTTAGCATAATATGTCTCACCATGT 57.021 30.769 1.92 0.00 0.00 3.21
391 392 8.978874 TTTAGCATAATATGTCTCACCATGTT 57.021 30.769 1.92 0.00 32.02 2.71
392 393 8.978874 TTAGCATAATATGTCTCACCATGTTT 57.021 30.769 1.92 0.00 30.20 2.83
393 394 7.502120 AGCATAATATGTCTCACCATGTTTC 57.498 36.000 1.92 0.00 30.20 2.78
394 395 7.285566 AGCATAATATGTCTCACCATGTTTCT 58.714 34.615 1.92 0.00 30.20 2.52
395 396 8.432013 AGCATAATATGTCTCACCATGTTTCTA 58.568 33.333 1.92 0.00 30.20 2.10
396 397 8.715998 GCATAATATGTCTCACCATGTTTCTAG 58.284 37.037 1.92 0.00 30.20 2.43
397 398 9.212641 CATAATATGTCTCACCATGTTTCTAGG 57.787 37.037 0.00 0.00 30.20 3.02
398 399 7.437713 AATATGTCTCACCATGTTTCTAGGA 57.562 36.000 0.00 0.00 0.00 2.94
399 400 5.762179 ATGTCTCACCATGTTTCTAGGAA 57.238 39.130 0.00 0.00 0.00 3.36
400 401 5.762179 TGTCTCACCATGTTTCTAGGAAT 57.238 39.130 0.00 0.00 0.00 3.01
401 402 6.867519 TGTCTCACCATGTTTCTAGGAATA 57.132 37.500 0.00 0.00 0.00 1.75
402 403 7.252612 TGTCTCACCATGTTTCTAGGAATAA 57.747 36.000 0.00 0.00 0.00 1.40
403 404 7.103641 TGTCTCACCATGTTTCTAGGAATAAC 58.896 38.462 0.00 0.00 0.00 1.89
404 405 7.038302 TGTCTCACCATGTTTCTAGGAATAACT 60.038 37.037 0.00 0.00 0.00 2.24
405 406 8.475639 GTCTCACCATGTTTCTAGGAATAACTA 58.524 37.037 0.00 0.00 0.00 2.24
406 407 8.696374 TCTCACCATGTTTCTAGGAATAACTAG 58.304 37.037 0.00 0.00 41.41 2.57
407 408 8.375493 TCACCATGTTTCTAGGAATAACTAGT 57.625 34.615 0.00 0.00 40.97 2.57
408 409 8.822805 TCACCATGTTTCTAGGAATAACTAGTT 58.177 33.333 13.68 13.68 40.97 2.24
431 432 9.995003 AGTTATTGAAGATAAGGCTAAGAGATG 57.005 33.333 0.00 0.00 0.00 2.90
432 433 9.988815 GTTATTGAAGATAAGGCTAAGAGATGA 57.011 33.333 0.00 0.00 0.00 2.92
433 434 9.988815 TTATTGAAGATAAGGCTAAGAGATGAC 57.011 33.333 0.00 0.00 0.00 3.06
434 435 6.412362 TGAAGATAAGGCTAAGAGATGACC 57.588 41.667 0.00 0.00 0.00 4.02
435 436 5.305644 TGAAGATAAGGCTAAGAGATGACCC 59.694 44.000 0.00 0.00 0.00 4.46
436 437 4.820775 AGATAAGGCTAAGAGATGACCCA 58.179 43.478 0.00 0.00 0.00 4.51
437 438 5.410602 AGATAAGGCTAAGAGATGACCCAT 58.589 41.667 0.00 0.00 0.00 4.00
438 439 5.848921 AGATAAGGCTAAGAGATGACCCATT 59.151 40.000 0.00 0.00 0.00 3.16
439 440 3.853355 AGGCTAAGAGATGACCCATTG 57.147 47.619 0.00 0.00 0.00 2.82
440 441 3.118531 AGGCTAAGAGATGACCCATTGT 58.881 45.455 0.00 0.00 0.00 2.71
441 442 4.298626 AGGCTAAGAGATGACCCATTGTA 58.701 43.478 0.00 0.00 0.00 2.41
442 443 4.346418 AGGCTAAGAGATGACCCATTGTAG 59.654 45.833 0.00 0.00 0.00 2.74
443 444 4.345257 GGCTAAGAGATGACCCATTGTAGA 59.655 45.833 0.00 0.00 0.00 2.59
444 445 5.293560 GCTAAGAGATGACCCATTGTAGAC 58.706 45.833 0.00 0.00 0.00 2.59
445 446 5.163405 GCTAAGAGATGACCCATTGTAGACA 60.163 44.000 0.00 0.00 0.00 3.41
446 447 5.762179 AAGAGATGACCCATTGTAGACAA 57.238 39.130 0.00 0.00 40.51 3.18
447 448 5.965033 AGAGATGACCCATTGTAGACAAT 57.035 39.130 1.96 1.96 46.62 2.71
448 449 6.319048 AGAGATGACCCATTGTAGACAATT 57.681 37.500 5.14 0.00 43.48 2.32
449 450 6.725364 AGAGATGACCCATTGTAGACAATTT 58.275 36.000 5.14 0.00 43.48 1.82
450 451 7.177878 AGAGATGACCCATTGTAGACAATTTT 58.822 34.615 5.14 0.00 43.48 1.82
451 452 7.121759 AGAGATGACCCATTGTAGACAATTTTG 59.878 37.037 5.14 0.00 43.48 2.44
452 453 6.721208 AGATGACCCATTGTAGACAATTTTGT 59.279 34.615 5.14 0.00 43.48 2.83
453 454 6.723298 TGACCCATTGTAGACAATTTTGTT 57.277 33.333 5.14 0.00 43.48 2.83
454 455 7.118496 TGACCCATTGTAGACAATTTTGTTT 57.882 32.000 5.14 0.00 43.48 2.83
455 456 6.983307 TGACCCATTGTAGACAATTTTGTTTG 59.017 34.615 5.14 0.00 43.48 2.93
456 457 6.883744 ACCCATTGTAGACAATTTTGTTTGT 58.116 32.000 5.14 0.00 43.48 2.83
457 458 7.334858 ACCCATTGTAGACAATTTTGTTTGTT 58.665 30.769 5.14 0.00 43.48 2.83
458 459 8.478877 ACCCATTGTAGACAATTTTGTTTGTTA 58.521 29.630 5.14 0.00 43.48 2.41
459 460 9.487790 CCCATTGTAGACAATTTTGTTTGTTAT 57.512 29.630 5.14 0.00 43.48 1.89
480 481 9.890629 TGTTATCTCTAAATTACATGCAAGACT 57.109 29.630 0.00 0.00 0.00 3.24
493 494 7.840342 ACATGCAAGACTTAAGATAAGACTG 57.160 36.000 10.09 2.08 0.00 3.51
494 495 7.390027 ACATGCAAGACTTAAGATAAGACTGT 58.610 34.615 10.09 2.69 0.00 3.55
495 496 7.547370 ACATGCAAGACTTAAGATAAGACTGTC 59.453 37.037 10.09 0.00 0.00 3.51
496 497 7.233389 TGCAAGACTTAAGATAAGACTGTCT 57.767 36.000 10.09 4.06 35.20 3.41
497 498 7.671302 TGCAAGACTTAAGATAAGACTGTCTT 58.329 34.615 24.80 24.80 41.90 3.01
498 499 8.803235 TGCAAGACTTAAGATAAGACTGTCTTA 58.197 33.333 27.13 27.13 42.49 2.10
513 514 9.896645 AAGACTGTCTTATCAATCATTGTACAT 57.103 29.630 20.85 0.00 34.42 2.29
514 515 9.322773 AGACTGTCTTATCAATCATTGTACATG 57.677 33.333 4.06 0.00 0.00 3.21
515 516 7.923888 ACTGTCTTATCAATCATTGTACATGC 58.076 34.615 0.00 0.00 0.00 4.06
516 517 7.012704 ACTGTCTTATCAATCATTGTACATGCC 59.987 37.037 0.00 0.00 0.00 4.40
517 518 6.262944 TGTCTTATCAATCATTGTACATGCCC 59.737 38.462 0.00 0.00 0.00 5.36
523 524 2.710377 TCATTGTACATGCCCTCACAC 58.290 47.619 0.00 0.00 0.00 3.82
588 589 0.251165 ACCCAAAGCACGCACCTTAT 60.251 50.000 0.00 0.00 0.00 1.73
589 590 0.887933 CCCAAAGCACGCACCTTATT 59.112 50.000 0.00 0.00 0.00 1.40
590 591 2.088423 CCCAAAGCACGCACCTTATTA 58.912 47.619 0.00 0.00 0.00 0.98
606 607 4.631813 CCTTATTACTGAACACACTGCCTC 59.368 45.833 0.00 0.00 0.00 4.70
668 672 2.098443 TCTTCCGCGGCCAATTAATTTC 59.902 45.455 23.51 0.00 0.00 2.17
764 771 5.812642 GCCATACATCTAATCTAACCCGATG 59.187 44.000 0.00 0.00 37.92 3.84
769 776 7.776618 ACATCTAATCTAACCCGATGTCATA 57.223 36.000 0.00 0.00 40.23 2.15
966 2260 2.967615 GCCGGTAATCCTCTGCGC 60.968 66.667 1.90 0.00 0.00 6.09
983 2277 1.740043 GCGCCAAGGCAAGCATATTTT 60.740 47.619 12.19 0.00 42.06 1.82
984 2278 1.928503 CGCCAAGGCAAGCATATTTTG 59.071 47.619 12.19 0.00 42.06 2.44
993 2287 2.676744 GCATATTTTGCCGGTTGCC 58.323 52.632 1.90 0.00 46.15 4.52
1101 2395 1.202313 GCAGATCGGTCGAAGCTAGTT 60.202 52.381 0.00 0.00 0.00 2.24
1102 2396 2.455032 CAGATCGGTCGAAGCTAGTTG 58.545 52.381 0.00 0.00 0.00 3.16
1103 2397 2.097629 CAGATCGGTCGAAGCTAGTTGA 59.902 50.000 0.00 0.00 0.00 3.18
1104 2398 2.753452 AGATCGGTCGAAGCTAGTTGAA 59.247 45.455 0.00 0.00 0.00 2.69
1292 2586 2.596904 TCAAGCTAAGGGTGCGTATC 57.403 50.000 0.00 0.00 35.28 2.24
1307 2602 2.625737 CGTATCATCATCCCTGCCATC 58.374 52.381 0.00 0.00 0.00 3.51
1308 2603 2.235650 CGTATCATCATCCCTGCCATCT 59.764 50.000 0.00 0.00 0.00 2.90
1310 2605 1.062364 TCATCATCCCTGCCATCTCC 58.938 55.000 0.00 0.00 0.00 3.71
1311 2606 0.769247 CATCATCCCTGCCATCTCCA 59.231 55.000 0.00 0.00 0.00 3.86
1312 2607 1.354705 CATCATCCCTGCCATCTCCAT 59.645 52.381 0.00 0.00 0.00 3.41
1313 2608 1.062364 TCATCCCTGCCATCTCCATC 58.938 55.000 0.00 0.00 0.00 3.51
1314 2609 0.037877 CATCCCTGCCATCTCCATCC 59.962 60.000 0.00 0.00 0.00 3.51
1315 2610 0.402419 ATCCCTGCCATCTCCATCCA 60.402 55.000 0.00 0.00 0.00 3.41
1316 2611 0.402419 TCCCTGCCATCTCCATCCAT 60.402 55.000 0.00 0.00 0.00 3.41
1317 2612 0.037877 CCCTGCCATCTCCATCCATC 59.962 60.000 0.00 0.00 0.00 3.51
1318 2613 0.037877 CCTGCCATCTCCATCCATCC 59.962 60.000 0.00 0.00 0.00 3.51
1319 2614 0.769247 CTGCCATCTCCATCCATCCA 59.231 55.000 0.00 0.00 0.00 3.41
1320 2615 1.354705 CTGCCATCTCCATCCATCCAT 59.645 52.381 0.00 0.00 0.00 3.41
1321 2616 1.353358 TGCCATCTCCATCCATCCATC 59.647 52.381 0.00 0.00 0.00 3.51
1322 2617 1.340795 GCCATCTCCATCCATCCATCC 60.341 57.143 0.00 0.00 0.00 3.51
1323 2618 1.990327 CCATCTCCATCCATCCATCCA 59.010 52.381 0.00 0.00 0.00 3.41
1324 2619 2.581246 CCATCTCCATCCATCCATCCAT 59.419 50.000 0.00 0.00 0.00 3.41
1325 2620 3.621558 CATCTCCATCCATCCATCCATG 58.378 50.000 0.00 0.00 0.00 3.66
1326 2621 1.353358 TCTCCATCCATCCATCCATGC 59.647 52.381 0.00 0.00 0.00 4.06
1376 2679 7.716560 TGGGTTTGATCATGTATAATCTCACTG 59.283 37.037 0.00 0.00 0.00 3.66
1378 2681 9.113838 GGTTTGATCATGTATAATCTCACTGTT 57.886 33.333 0.00 0.00 0.00 3.16
1379 2682 9.926751 GTTTGATCATGTATAATCTCACTGTTG 57.073 33.333 0.00 0.00 0.00 3.33
1380 2683 9.889128 TTTGATCATGTATAATCTCACTGTTGA 57.111 29.630 0.00 0.00 0.00 3.18
1383 2686 7.095695 TCATGTATAATCTCACTGTTGACGA 57.904 36.000 0.00 0.00 0.00 4.20
1385 2688 7.862873 TCATGTATAATCTCACTGTTGACGATC 59.137 37.037 0.00 0.00 0.00 3.69
1386 2689 6.199393 TGTATAATCTCACTGTTGACGATCG 58.801 40.000 14.88 14.88 0.00 3.69
1387 2690 3.577649 AATCTCACTGTTGACGATCGT 57.422 42.857 22.97 22.97 0.00 3.73
1388 2691 2.613730 TCTCACTGTTGACGATCGTC 57.386 50.000 35.46 35.46 44.77 4.20
1476 2789 7.624549 TGGTAAGAAGCAGAGTTAATTCTGAT 58.375 34.615 26.90 20.21 45.95 2.90
1477 2790 7.766278 TGGTAAGAAGCAGAGTTAATTCTGATC 59.234 37.037 26.90 22.11 45.95 2.92
1494 2807 1.812571 GATCCAAAACAGCACACCGAT 59.187 47.619 0.00 0.00 0.00 4.18
1495 2808 1.686355 TCCAAAACAGCACACCGATT 58.314 45.000 0.00 0.00 0.00 3.34
1496 2809 1.336440 TCCAAAACAGCACACCGATTG 59.664 47.619 0.00 0.00 0.00 2.67
1497 2810 1.336440 CCAAAACAGCACACCGATTGA 59.664 47.619 0.00 0.00 0.00 2.57
1512 2833 9.277565 CACACCGATTGAAGAATTTAATTACAG 57.722 33.333 0.00 0.00 34.15 2.74
1639 2964 4.569023 CTGGAGCGCGCGTCCATA 62.569 66.667 36.41 23.56 43.33 2.74
2043 3374 1.658717 CGATCGCCGTCTGTCATCC 60.659 63.158 0.26 0.00 0.00 3.51
2272 3620 5.913137 AATAAATTGTTCCCAATCGAGCA 57.087 34.783 0.00 0.00 40.42 4.26
2308 3662 9.944663 GTTTGTCTTACATGTGACTTGATTTTA 57.055 29.630 9.11 0.00 34.57 1.52
2338 3692 5.220931 GCCTACTTTGTAGATGAAGGCATTG 60.221 44.000 5.61 0.00 39.48 2.82
2360 3714 7.920160 TTGATATGCATGTTCTAAGACACAA 57.080 32.000 10.16 0.00 31.30 3.33
2365 3719 6.631971 TGCATGTTCTAAGACACAAATGAA 57.368 33.333 0.00 0.00 31.30 2.57
2367 3721 7.487484 TGCATGTTCTAAGACACAAATGAAAA 58.513 30.769 0.00 0.00 31.30 2.29
2422 3776 4.022935 TGAGCGCAAGAAATCTCAAATTGT 60.023 37.500 11.47 0.00 43.02 2.71
2514 3872 5.497474 AGCGGATACAAAACCTAATGAGTT 58.503 37.500 0.00 0.00 0.00 3.01
2519 3877 6.544931 GGATACAAAACCTAATGAGTTACCCC 59.455 42.308 0.00 0.00 0.00 4.95
2523 3881 3.056201 ACCTAATGAGTTACCCCCGAT 57.944 47.619 0.00 0.00 0.00 4.18
2550 3919 8.840833 TCTGCATAACTAACATGACACTAAAA 57.159 30.769 0.00 0.00 0.00 1.52
2556 3925 7.730364 AACTAACATGACACTAAAAGTCTGG 57.270 36.000 0.00 0.00 36.94 3.86
2557 3926 6.231211 ACTAACATGACACTAAAAGTCTGGG 58.769 40.000 0.00 0.00 36.94 4.45
2560 3930 5.308825 ACATGACACTAAAAGTCTGGGAAG 58.691 41.667 0.00 0.00 36.94 3.46
2566 3936 5.130350 CACTAAAAGTCTGGGAAGAAACCA 58.870 41.667 0.00 0.00 36.38 3.67
2573 3943 5.256474 AGTCTGGGAAGAAACCAACATATG 58.744 41.667 0.00 0.00 37.59 1.78
2679 4050 0.834612 TGGGTAATAACTCCCTGGCG 59.165 55.000 0.00 0.00 43.74 5.69
2683 4054 1.761198 GTAATAACTCCCTGGCGACCT 59.239 52.381 0.00 0.00 0.00 3.85
2706 4077 1.089481 CCAATCGCATACACACCGCT 61.089 55.000 0.00 0.00 0.00 5.52
2752 4123 2.540361 CGGTGTAGCGTAGACCACATAC 60.540 54.545 10.43 0.00 41.91 2.39
2809 4180 8.893727 GCAAAGGAGAAGAGTTTATGCTATTAA 58.106 33.333 0.00 0.00 0.00 1.40
2861 4232 8.469309 AGCAATCATAATAAGCCATACACTTT 57.531 30.769 0.00 0.00 0.00 2.66
2875 4249 6.053005 CCATACACTTTCACCCATAACGTAT 58.947 40.000 0.00 0.00 0.00 3.06
2920 4295 7.327214 GTCCAGCCAATGACCAAAAATATTTA 58.673 34.615 0.01 0.00 0.00 1.40
2921 4296 7.986889 GTCCAGCCAATGACCAAAAATATTTAT 59.013 33.333 0.01 0.00 0.00 1.40
2950 4325 6.104094 ACTTATGGGTGGGTATAATTGGATGT 59.896 38.462 0.00 0.00 0.00 3.06
2952 4327 4.541705 TGGGTGGGTATAATTGGATGTTG 58.458 43.478 0.00 0.00 0.00 3.33
2964 4339 8.821686 ATAATTGGATGTTGTTTGGATGACTA 57.178 30.769 0.00 0.00 0.00 2.59
3100 4475 6.647334 TTTTCTACAGTGGCATCATTCAAA 57.353 33.333 0.00 0.00 0.00 2.69
3132 4507 9.875691 GGTTCAAAGGAATATAGCAAAGAAAAT 57.124 29.630 0.00 0.00 35.05 1.82
3168 4543 9.457436 TTGTTCCTTTTGTCTTAGTTTAAGAGT 57.543 29.630 0.00 0.00 44.79 3.24
3214 4590 4.965532 TCCAAATGGACCTCCTTTCAAAAA 59.034 37.500 0.00 0.00 39.78 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.221840 CATTGTCCCTCCTCACCGG 59.778 63.158 0.00 0.00 0.00 5.28
1 2 0.108138 GTCATTGTCCCTCCTCACCG 60.108 60.000 0.00 0.00 0.00 4.94
2 3 0.108138 CGTCATTGTCCCTCCTCACC 60.108 60.000 0.00 0.00 0.00 4.02
3 4 0.108138 CCGTCATTGTCCCTCCTCAC 60.108 60.000 0.00 0.00 0.00 3.51
4 5 0.544357 ACCGTCATTGTCCCTCCTCA 60.544 55.000 0.00 0.00 0.00 3.86
5 6 0.108138 CACCGTCATTGTCCCTCCTC 60.108 60.000 0.00 0.00 0.00 3.71
6 7 0.544357 TCACCGTCATTGTCCCTCCT 60.544 55.000 0.00 0.00 0.00 3.69
7 8 0.391263 GTCACCGTCATTGTCCCTCC 60.391 60.000 0.00 0.00 0.00 4.30
8 9 0.320374 TGTCACCGTCATTGTCCCTC 59.680 55.000 0.00 0.00 0.00 4.30
9 10 0.034896 GTGTCACCGTCATTGTCCCT 59.965 55.000 0.00 0.00 0.00 4.20
10 11 0.953960 GGTGTCACCGTCATTGTCCC 60.954 60.000 6.18 0.00 0.00 4.46
11 12 0.034896 AGGTGTCACCGTCATTGTCC 59.965 55.000 16.44 0.00 44.90 4.02
12 13 1.798813 GAAGGTGTCACCGTCATTGTC 59.201 52.381 27.13 10.05 44.59 3.18
13 14 1.872237 CGAAGGTGTCACCGTCATTGT 60.872 52.381 29.73 5.42 45.33 2.71
14 15 0.790207 CGAAGGTGTCACCGTCATTG 59.210 55.000 29.73 15.15 45.33 2.82
15 16 0.320421 CCGAAGGTGTCACCGTCATT 60.320 55.000 29.73 14.75 45.33 2.57
16 17 1.292223 CCGAAGGTGTCACCGTCAT 59.708 57.895 29.73 13.76 45.33 3.06
17 18 2.732016 CCGAAGGTGTCACCGTCA 59.268 61.111 29.73 0.00 45.33 4.35
29 30 0.946221 AACACTGAAGCGAGCCGAAG 60.946 55.000 0.00 0.00 0.00 3.79
30 31 0.531974 AAACACTGAAGCGAGCCGAA 60.532 50.000 0.00 0.00 0.00 4.30
31 32 0.315886 TAAACACTGAAGCGAGCCGA 59.684 50.000 0.00 0.00 0.00 5.54
32 33 1.359848 ATAAACACTGAAGCGAGCCG 58.640 50.000 0.00 0.00 0.00 5.52
33 34 3.522553 ACTATAAACACTGAAGCGAGCC 58.477 45.455 0.00 0.00 0.00 4.70
34 35 3.240861 CGACTATAAACACTGAAGCGAGC 59.759 47.826 0.00 0.00 0.00 5.03
35 36 4.413087 ACGACTATAAACACTGAAGCGAG 58.587 43.478 0.00 0.00 0.00 5.03
36 37 4.409570 GACGACTATAAACACTGAAGCGA 58.590 43.478 0.00 0.00 0.00 4.93
37 38 3.237660 CGACGACTATAAACACTGAAGCG 59.762 47.826 0.00 0.00 0.00 4.68
38 39 4.164294 ACGACGACTATAAACACTGAAGC 58.836 43.478 0.00 0.00 0.00 3.86
39 40 6.468319 CCTAACGACGACTATAAACACTGAAG 59.532 42.308 0.00 0.00 0.00 3.02
40 41 6.072508 ACCTAACGACGACTATAAACACTGAA 60.073 38.462 0.00 0.00 0.00 3.02
41 42 5.412594 ACCTAACGACGACTATAAACACTGA 59.587 40.000 0.00 0.00 0.00 3.41
42 43 5.510674 CACCTAACGACGACTATAAACACTG 59.489 44.000 0.00 0.00 0.00 3.66
43 44 5.392380 CCACCTAACGACGACTATAAACACT 60.392 44.000 0.00 0.00 0.00 3.55
44 45 4.795278 CCACCTAACGACGACTATAAACAC 59.205 45.833 0.00 0.00 0.00 3.32
45 46 4.458989 ACCACCTAACGACGACTATAAACA 59.541 41.667 0.00 0.00 0.00 2.83
46 47 4.986622 ACCACCTAACGACGACTATAAAC 58.013 43.478 0.00 0.00 0.00 2.01
47 48 4.943705 AGACCACCTAACGACGACTATAAA 59.056 41.667 0.00 0.00 0.00 1.40
48 49 4.517285 AGACCACCTAACGACGACTATAA 58.483 43.478 0.00 0.00 0.00 0.98
49 50 4.142609 AGACCACCTAACGACGACTATA 57.857 45.455 0.00 0.00 0.00 1.31
50 51 2.996631 AGACCACCTAACGACGACTAT 58.003 47.619 0.00 0.00 0.00 2.12
51 52 2.479566 AGACCACCTAACGACGACTA 57.520 50.000 0.00 0.00 0.00 2.59
52 53 2.479566 TAGACCACCTAACGACGACT 57.520 50.000 0.00 0.00 0.00 4.18
53 54 2.679837 TCATAGACCACCTAACGACGAC 59.320 50.000 0.00 0.00 0.00 4.34
54 55 2.989909 TCATAGACCACCTAACGACGA 58.010 47.619 0.00 0.00 0.00 4.20
55 56 3.770263 TTCATAGACCACCTAACGACG 57.230 47.619 0.00 0.00 0.00 5.12
56 57 5.293569 CCAAATTCATAGACCACCTAACGAC 59.706 44.000 0.00 0.00 0.00 4.34
57 58 5.188163 TCCAAATTCATAGACCACCTAACGA 59.812 40.000 0.00 0.00 0.00 3.85
58 59 5.424757 TCCAAATTCATAGACCACCTAACG 58.575 41.667 0.00 0.00 0.00 3.18
59 60 6.828785 ACATCCAAATTCATAGACCACCTAAC 59.171 38.462 0.00 0.00 0.00 2.34
60 61 6.969043 ACATCCAAATTCATAGACCACCTAA 58.031 36.000 0.00 0.00 0.00 2.69
61 62 6.575244 ACATCCAAATTCATAGACCACCTA 57.425 37.500 0.00 0.00 0.00 3.08
62 63 5.456921 ACATCCAAATTCATAGACCACCT 57.543 39.130 0.00 0.00 0.00 4.00
63 64 7.823745 ATTACATCCAAATTCATAGACCACC 57.176 36.000 0.00 0.00 0.00 4.61
64 65 9.736023 GAAATTACATCCAAATTCATAGACCAC 57.264 33.333 0.00 0.00 0.00 4.16
65 66 9.699410 AGAAATTACATCCAAATTCATAGACCA 57.301 29.630 0.00 0.00 0.00 4.02
86 87 9.457436 ACACCGAACACCTAAAATAATAGAAAT 57.543 29.630 0.00 0.00 0.00 2.17
87 88 8.851541 ACACCGAACACCTAAAATAATAGAAA 57.148 30.769 0.00 0.00 0.00 2.52
88 89 9.369904 GTACACCGAACACCTAAAATAATAGAA 57.630 33.333 0.00 0.00 0.00 2.10
89 90 8.752187 AGTACACCGAACACCTAAAATAATAGA 58.248 33.333 0.00 0.00 0.00 1.98
90 91 8.814235 CAGTACACCGAACACCTAAAATAATAG 58.186 37.037 0.00 0.00 0.00 1.73
91 92 7.278424 GCAGTACACCGAACACCTAAAATAATA 59.722 37.037 0.00 0.00 0.00 0.98
92 93 6.093082 GCAGTACACCGAACACCTAAAATAAT 59.907 38.462 0.00 0.00 0.00 1.28
93 94 5.409214 GCAGTACACCGAACACCTAAAATAA 59.591 40.000 0.00 0.00 0.00 1.40
94 95 4.931002 GCAGTACACCGAACACCTAAAATA 59.069 41.667 0.00 0.00 0.00 1.40
95 96 3.749609 GCAGTACACCGAACACCTAAAAT 59.250 43.478 0.00 0.00 0.00 1.82
96 97 3.132925 GCAGTACACCGAACACCTAAAA 58.867 45.455 0.00 0.00 0.00 1.52
97 98 2.548493 GGCAGTACACCGAACACCTAAA 60.548 50.000 0.00 0.00 0.00 1.85
98 99 1.001181 GGCAGTACACCGAACACCTAA 59.999 52.381 0.00 0.00 0.00 2.69
99 100 0.604578 GGCAGTACACCGAACACCTA 59.395 55.000 0.00 0.00 0.00 3.08
100 101 1.370064 GGCAGTACACCGAACACCT 59.630 57.895 0.00 0.00 0.00 4.00
101 102 0.321298 ATGGCAGTACACCGAACACC 60.321 55.000 0.00 0.00 0.00 4.16
102 103 0.796312 CATGGCAGTACACCGAACAC 59.204 55.000 0.00 0.00 0.00 3.32
103 104 0.682292 TCATGGCAGTACACCGAACA 59.318 50.000 0.00 0.00 0.00 3.18
104 105 2.024176 ATCATGGCAGTACACCGAAC 57.976 50.000 0.00 0.00 0.00 3.95
105 106 2.779755 AATCATGGCAGTACACCGAA 57.220 45.000 0.00 0.00 0.00 4.30
106 107 3.897141 TTAATCATGGCAGTACACCGA 57.103 42.857 0.00 0.00 0.00 4.69
107 108 4.188462 TCTTTAATCATGGCAGTACACCG 58.812 43.478 0.00 0.00 0.00 4.94
108 109 5.822519 TCATCTTTAATCATGGCAGTACACC 59.177 40.000 0.00 0.00 0.00 4.16
109 110 6.925610 TCATCTTTAATCATGGCAGTACAC 57.074 37.500 0.00 0.00 0.00 2.90
110 111 9.276590 CTATTCATCTTTAATCATGGCAGTACA 57.723 33.333 0.00 0.00 0.00 2.90
111 112 9.494271 TCTATTCATCTTTAATCATGGCAGTAC 57.506 33.333 0.00 0.00 0.00 2.73
113 114 9.228949 GATCTATTCATCTTTAATCATGGCAGT 57.771 33.333 0.00 0.00 0.00 4.40
114 115 8.388853 CGATCTATTCATCTTTAATCATGGCAG 58.611 37.037 0.00 0.00 0.00 4.85
115 116 8.096414 TCGATCTATTCATCTTTAATCATGGCA 58.904 33.333 0.00 0.00 0.00 4.92
116 117 8.484641 TCGATCTATTCATCTTTAATCATGGC 57.515 34.615 0.00 0.00 0.00 4.40
126 127 8.812329 CGAGAAAACTTTCGATCTATTCATCTT 58.188 33.333 0.00 0.00 41.92 2.40
127 128 7.436673 CCGAGAAAACTTTCGATCTATTCATCT 59.563 37.037 0.00 0.00 41.92 2.90
128 129 7.306866 CCCGAGAAAACTTTCGATCTATTCATC 60.307 40.741 0.00 0.00 41.92 2.92
129 130 6.480320 CCCGAGAAAACTTTCGATCTATTCAT 59.520 38.462 0.00 0.00 41.92 2.57
130 131 5.810587 CCCGAGAAAACTTTCGATCTATTCA 59.189 40.000 0.00 0.00 41.92 2.57
131 132 5.234543 CCCCGAGAAAACTTTCGATCTATTC 59.765 44.000 0.00 0.00 41.92 1.75
132 133 5.105064 TCCCCGAGAAAACTTTCGATCTATT 60.105 40.000 0.00 0.00 41.92 1.73
133 134 4.404715 TCCCCGAGAAAACTTTCGATCTAT 59.595 41.667 0.00 0.00 41.92 1.98
134 135 3.765511 TCCCCGAGAAAACTTTCGATCTA 59.234 43.478 0.00 0.00 41.92 1.98
135 136 2.565834 TCCCCGAGAAAACTTTCGATCT 59.434 45.455 0.00 0.00 41.92 2.75
136 137 2.968675 TCCCCGAGAAAACTTTCGATC 58.031 47.619 0.00 0.00 41.92 3.69
137 138 3.412237 TTCCCCGAGAAAACTTTCGAT 57.588 42.857 0.00 0.00 41.92 3.59
138 139 2.914695 TTCCCCGAGAAAACTTTCGA 57.085 45.000 0.00 0.00 41.92 3.71
139 140 3.974871 TTTTCCCCGAGAAAACTTTCG 57.025 42.857 8.65 0.00 47.00 3.46
146 147 2.030628 GCGACAATTTTTCCCCGAGAAA 60.031 45.455 0.00 0.00 42.82 2.52
147 148 1.538075 GCGACAATTTTTCCCCGAGAA 59.462 47.619 0.00 0.00 0.00 2.87
148 149 1.161843 GCGACAATTTTTCCCCGAGA 58.838 50.000 0.00 0.00 0.00 4.04
149 150 1.165270 AGCGACAATTTTTCCCCGAG 58.835 50.000 0.00 0.00 0.00 4.63
150 151 2.289819 ACTAGCGACAATTTTTCCCCGA 60.290 45.455 0.00 0.00 0.00 5.14
151 152 2.081462 ACTAGCGACAATTTTTCCCCG 58.919 47.619 0.00 0.00 0.00 5.73
152 153 4.698780 ACTTACTAGCGACAATTTTTCCCC 59.301 41.667 0.00 0.00 0.00 4.81
153 154 5.874895 ACTTACTAGCGACAATTTTTCCC 57.125 39.130 0.00 0.00 0.00 3.97
154 155 8.880750 AGAATACTTACTAGCGACAATTTTTCC 58.119 33.333 0.00 0.00 0.00 3.13
157 158 8.665685 CCAAGAATACTTACTAGCGACAATTTT 58.334 33.333 0.00 0.00 34.70 1.82
158 159 7.822822 ACCAAGAATACTTACTAGCGACAATTT 59.177 33.333 0.00 0.00 34.70 1.82
202 203 3.117776 TCAGGTGGATCTGCATGCTTAAT 60.118 43.478 20.33 9.41 34.91 1.40
219 220 1.512926 GTTGCGACACAGATTCAGGT 58.487 50.000 0.00 0.00 0.00 4.00
243 244 1.915489 ACACCATTGTAGATGCCCTGA 59.085 47.619 0.00 0.00 32.60 3.86
244 245 2.425143 ACACCATTGTAGATGCCCTG 57.575 50.000 0.00 0.00 32.60 4.45
245 246 4.413520 AGATAACACCATTGTAGATGCCCT 59.586 41.667 0.00 0.00 33.55 5.19
246 247 4.718961 AGATAACACCATTGTAGATGCCC 58.281 43.478 0.00 0.00 33.55 5.36
247 248 6.073003 GCTAAGATAACACCATTGTAGATGCC 60.073 42.308 0.00 0.00 33.55 4.40
248 249 6.483307 TGCTAAGATAACACCATTGTAGATGC 59.517 38.462 0.00 0.00 33.55 3.91
249 250 7.712639 ACTGCTAAGATAACACCATTGTAGATG 59.287 37.037 0.00 0.00 33.55 2.90
250 251 7.712639 CACTGCTAAGATAACACCATTGTAGAT 59.287 37.037 0.00 0.00 33.55 1.98
251 252 7.041721 CACTGCTAAGATAACACCATTGTAGA 58.958 38.462 0.00 0.00 33.55 2.59
252 253 6.238211 GCACTGCTAAGATAACACCATTGTAG 60.238 42.308 0.00 0.00 33.55 2.74
253 254 5.584649 GCACTGCTAAGATAACACCATTGTA 59.415 40.000 0.00 0.00 33.55 2.41
254 255 4.396166 GCACTGCTAAGATAACACCATTGT 59.604 41.667 0.00 0.00 37.67 2.71
255 256 4.201950 GGCACTGCTAAGATAACACCATTG 60.202 45.833 0.00 0.00 0.00 2.82
256 257 3.947834 GGCACTGCTAAGATAACACCATT 59.052 43.478 0.00 0.00 0.00 3.16
257 258 3.054434 TGGCACTGCTAAGATAACACCAT 60.054 43.478 0.00 0.00 0.00 3.55
258 259 2.304470 TGGCACTGCTAAGATAACACCA 59.696 45.455 0.00 0.00 0.00 4.17
259 260 2.985896 TGGCACTGCTAAGATAACACC 58.014 47.619 0.00 0.00 0.00 4.16
260 261 3.941483 ACATGGCACTGCTAAGATAACAC 59.059 43.478 0.00 0.00 0.00 3.32
261 262 4.220693 ACATGGCACTGCTAAGATAACA 57.779 40.909 0.00 0.00 0.00 2.41
262 263 4.752101 CCTACATGGCACTGCTAAGATAAC 59.248 45.833 0.00 0.00 0.00 1.89
263 264 4.653801 TCCTACATGGCACTGCTAAGATAA 59.346 41.667 0.00 0.00 35.26 1.75
264 265 4.223144 TCCTACATGGCACTGCTAAGATA 58.777 43.478 0.00 0.00 35.26 1.98
265 266 3.041211 TCCTACATGGCACTGCTAAGAT 58.959 45.455 0.00 0.00 35.26 2.40
266 267 2.466846 TCCTACATGGCACTGCTAAGA 58.533 47.619 0.00 0.00 35.26 2.10
267 268 2.988010 TCCTACATGGCACTGCTAAG 57.012 50.000 0.00 0.00 35.26 2.18
268 269 5.366482 TTTATCCTACATGGCACTGCTAA 57.634 39.130 0.00 0.00 35.26 3.09
269 270 5.071653 TCATTTATCCTACATGGCACTGCTA 59.928 40.000 0.00 0.00 35.26 3.49
270 271 3.931907 TTTATCCTACATGGCACTGCT 57.068 42.857 0.00 0.00 35.26 4.24
271 272 4.136796 TCATTTATCCTACATGGCACTGC 58.863 43.478 0.00 0.00 35.26 4.40
272 273 5.999600 TCATCATTTATCCTACATGGCACTG 59.000 40.000 0.00 0.00 35.26 3.66
273 274 6.191657 TCATCATTTATCCTACATGGCACT 57.808 37.500 0.00 0.00 35.26 4.40
274 275 5.413833 CCTCATCATTTATCCTACATGGCAC 59.586 44.000 0.00 0.00 35.26 5.01
275 276 5.073554 ACCTCATCATTTATCCTACATGGCA 59.926 40.000 0.00 0.00 35.26 4.92
276 277 5.413833 CACCTCATCATTTATCCTACATGGC 59.586 44.000 0.00 0.00 35.26 4.40
277 278 5.942236 CCACCTCATCATTTATCCTACATGG 59.058 44.000 0.00 0.00 37.10 3.66
278 279 6.772605 TCCACCTCATCATTTATCCTACATG 58.227 40.000 0.00 0.00 0.00 3.21
279 280 6.013032 CCTCCACCTCATCATTTATCCTACAT 60.013 42.308 0.00 0.00 0.00 2.29
280 281 5.307976 CCTCCACCTCATCATTTATCCTACA 59.692 44.000 0.00 0.00 0.00 2.74
281 282 5.544176 TCCTCCACCTCATCATTTATCCTAC 59.456 44.000 0.00 0.00 0.00 3.18
282 283 5.726560 TCCTCCACCTCATCATTTATCCTA 58.273 41.667 0.00 0.00 0.00 2.94
283 284 4.570926 TCCTCCACCTCATCATTTATCCT 58.429 43.478 0.00 0.00 0.00 3.24
284 285 4.594920 TCTCCTCCACCTCATCATTTATCC 59.405 45.833 0.00 0.00 0.00 2.59
285 286 5.541868 TCTCTCCTCCACCTCATCATTTATC 59.458 44.000 0.00 0.00 0.00 1.75
286 287 5.471424 TCTCTCCTCCACCTCATCATTTAT 58.529 41.667 0.00 0.00 0.00 1.40
287 288 4.883759 TCTCTCCTCCACCTCATCATTTA 58.116 43.478 0.00 0.00 0.00 1.40
288 289 3.710677 CTCTCTCCTCCACCTCATCATTT 59.289 47.826 0.00 0.00 0.00 2.32
289 290 3.052262 TCTCTCTCCTCCACCTCATCATT 60.052 47.826 0.00 0.00 0.00 2.57
290 291 2.517553 TCTCTCTCCTCCACCTCATCAT 59.482 50.000 0.00 0.00 0.00 2.45
291 292 1.925959 TCTCTCTCCTCCACCTCATCA 59.074 52.381 0.00 0.00 0.00 3.07
292 293 2.746279 TCTCTCTCCTCCACCTCATC 57.254 55.000 0.00 0.00 0.00 2.92
293 294 3.704545 ATTCTCTCTCCTCCACCTCAT 57.295 47.619 0.00 0.00 0.00 2.90
294 295 3.245766 TGAATTCTCTCTCCTCCACCTCA 60.246 47.826 7.05 0.00 0.00 3.86
295 296 3.370104 TGAATTCTCTCTCCTCCACCTC 58.630 50.000 7.05 0.00 0.00 3.85
296 297 3.481559 TGAATTCTCTCTCCTCCACCT 57.518 47.619 7.05 0.00 0.00 4.00
297 298 5.600484 TCTTATGAATTCTCTCTCCTCCACC 59.400 44.000 7.05 0.00 0.00 4.61
298 299 6.723298 TCTTATGAATTCTCTCTCCTCCAC 57.277 41.667 7.05 0.00 0.00 4.02
299 300 7.739995 TTTCTTATGAATTCTCTCTCCTCCA 57.260 36.000 7.05 0.00 31.56 3.86
300 301 8.482128 TCTTTTCTTATGAATTCTCTCTCCTCC 58.518 37.037 7.05 0.00 31.56 4.30
301 302 9.313118 GTCTTTTCTTATGAATTCTCTCTCCTC 57.687 37.037 7.05 0.00 31.56 3.71
302 303 9.045745 AGTCTTTTCTTATGAATTCTCTCTCCT 57.954 33.333 7.05 0.00 31.56 3.69
303 304 9.665719 AAGTCTTTTCTTATGAATTCTCTCTCC 57.334 33.333 7.05 0.00 31.56 3.71
345 346 8.945057 GCTAAAAGATCATCTCTTGTCTTTTCT 58.055 33.333 13.31 0.00 43.60 2.52
346 347 8.725148 TGCTAAAAGATCATCTCTTGTCTTTTC 58.275 33.333 13.31 4.11 43.60 2.29
347 348 8.627208 TGCTAAAAGATCATCTCTTGTCTTTT 57.373 30.769 14.11 14.11 43.60 2.27
348 349 8.804912 ATGCTAAAAGATCATCTCTTGTCTTT 57.195 30.769 0.00 0.00 43.60 2.52
349 350 9.896645 TTATGCTAAAAGATCATCTCTTGTCTT 57.103 29.630 0.00 0.00 43.60 3.01
360 361 9.494271 GGTGAGACATATTATGCTAAAAGATCA 57.506 33.333 3.52 0.00 0.00 2.92
361 362 9.494271 TGGTGAGACATATTATGCTAAAAGATC 57.506 33.333 3.52 0.00 0.00 2.75
363 364 9.276590 CATGGTGAGACATATTATGCTAAAAGA 57.723 33.333 3.52 0.00 0.00 2.52
364 365 9.060347 ACATGGTGAGACATATTATGCTAAAAG 57.940 33.333 3.52 0.00 0.00 2.27
365 366 8.978874 ACATGGTGAGACATATTATGCTAAAA 57.021 30.769 3.52 0.00 0.00 1.52
366 367 8.978874 AACATGGTGAGACATATTATGCTAAA 57.021 30.769 3.52 0.00 0.00 1.85
367 368 8.978874 AAACATGGTGAGACATATTATGCTAA 57.021 30.769 3.52 0.00 0.00 3.09
368 369 8.432013 AGAAACATGGTGAGACATATTATGCTA 58.568 33.333 3.52 0.00 0.00 3.49
369 370 7.285566 AGAAACATGGTGAGACATATTATGCT 58.714 34.615 3.52 2.51 0.00 3.79
370 371 7.502120 AGAAACATGGTGAGACATATTATGC 57.498 36.000 3.52 0.00 0.00 3.14
371 372 9.212641 CCTAGAAACATGGTGAGACATATTATG 57.787 37.037 0.00 2.03 0.00 1.90
372 373 9.159254 TCCTAGAAACATGGTGAGACATATTAT 57.841 33.333 0.00 0.00 0.00 1.28
373 374 8.547481 TCCTAGAAACATGGTGAGACATATTA 57.453 34.615 0.00 0.00 0.00 0.98
374 375 7.437713 TCCTAGAAACATGGTGAGACATATT 57.562 36.000 0.00 0.00 0.00 1.28
375 376 7.437713 TTCCTAGAAACATGGTGAGACATAT 57.562 36.000 0.00 0.00 0.00 1.78
376 377 6.867519 TTCCTAGAAACATGGTGAGACATA 57.132 37.500 0.00 0.00 0.00 2.29
377 378 5.762179 TTCCTAGAAACATGGTGAGACAT 57.238 39.130 0.00 0.00 0.00 3.06
378 379 5.762179 ATTCCTAGAAACATGGTGAGACA 57.238 39.130 0.00 0.00 0.00 3.41
379 380 7.331791 AGTTATTCCTAGAAACATGGTGAGAC 58.668 38.462 0.00 0.00 0.00 3.36
380 381 7.496346 AGTTATTCCTAGAAACATGGTGAGA 57.504 36.000 0.00 0.00 0.00 3.27
381 382 8.478877 ACTAGTTATTCCTAGAAACATGGTGAG 58.521 37.037 0.00 0.00 38.24 3.51
382 383 8.375493 ACTAGTTATTCCTAGAAACATGGTGA 57.625 34.615 0.00 0.00 38.24 4.02
405 406 9.995003 CATCTCTTAGCCTTATCTTCAATAACT 57.005 33.333 0.00 0.00 0.00 2.24
406 407 9.988815 TCATCTCTTAGCCTTATCTTCAATAAC 57.011 33.333 0.00 0.00 0.00 1.89
407 408 9.988815 GTCATCTCTTAGCCTTATCTTCAATAA 57.011 33.333 0.00 0.00 0.00 1.40
408 409 8.589338 GGTCATCTCTTAGCCTTATCTTCAATA 58.411 37.037 0.00 0.00 0.00 1.90
409 410 7.449247 GGTCATCTCTTAGCCTTATCTTCAAT 58.551 38.462 0.00 0.00 0.00 2.57
410 411 6.183361 GGGTCATCTCTTAGCCTTATCTTCAA 60.183 42.308 0.00 0.00 0.00 2.69
411 412 5.305644 GGGTCATCTCTTAGCCTTATCTTCA 59.694 44.000 0.00 0.00 0.00 3.02
412 413 5.305644 TGGGTCATCTCTTAGCCTTATCTTC 59.694 44.000 0.00 0.00 34.30 2.87
413 414 5.219739 TGGGTCATCTCTTAGCCTTATCTT 58.780 41.667 0.00 0.00 34.30 2.40
414 415 4.820775 TGGGTCATCTCTTAGCCTTATCT 58.179 43.478 0.00 0.00 34.30 1.98
415 416 5.753721 ATGGGTCATCTCTTAGCCTTATC 57.246 43.478 0.00 0.00 34.30 1.75
416 417 5.370880 ACAATGGGTCATCTCTTAGCCTTAT 59.629 40.000 0.00 0.00 34.30 1.73
417 418 4.721776 ACAATGGGTCATCTCTTAGCCTTA 59.278 41.667 0.00 0.00 34.30 2.69
418 419 3.525199 ACAATGGGTCATCTCTTAGCCTT 59.475 43.478 0.00 0.00 34.30 4.35
419 420 3.118531 ACAATGGGTCATCTCTTAGCCT 58.881 45.455 0.00 0.00 34.30 4.58
420 421 3.567478 ACAATGGGTCATCTCTTAGCC 57.433 47.619 0.00 0.00 0.00 3.93
421 422 5.163405 TGTCTACAATGGGTCATCTCTTAGC 60.163 44.000 0.00 0.00 0.00 3.09
422 423 6.471233 TGTCTACAATGGGTCATCTCTTAG 57.529 41.667 0.00 0.00 0.00 2.18
423 424 6.867519 TTGTCTACAATGGGTCATCTCTTA 57.132 37.500 0.00 0.00 0.00 2.10
424 425 5.762179 TTGTCTACAATGGGTCATCTCTT 57.238 39.130 0.00 0.00 0.00 2.85
425 426 5.965033 ATTGTCTACAATGGGTCATCTCT 57.035 39.130 7.52 0.00 44.22 3.10
426 427 7.094205 ACAAAATTGTCTACAATGGGTCATCTC 60.094 37.037 9.01 0.00 45.06 2.75
427 428 6.721208 ACAAAATTGTCTACAATGGGTCATCT 59.279 34.615 9.01 0.00 45.06 2.90
428 429 6.924111 ACAAAATTGTCTACAATGGGTCATC 58.076 36.000 9.01 0.00 45.06 2.92
429 430 6.916360 ACAAAATTGTCTACAATGGGTCAT 57.084 33.333 9.01 0.00 45.06 3.06
430 431 6.723298 AACAAAATTGTCTACAATGGGTCA 57.277 33.333 9.01 0.00 45.06 4.02
431 432 6.983890 ACAAACAAAATTGTCTACAATGGGTC 59.016 34.615 9.01 0.00 45.06 4.46
432 433 6.883744 ACAAACAAAATTGTCTACAATGGGT 58.116 32.000 9.01 5.54 45.06 4.51
433 434 7.784633 AACAAACAAAATTGTCTACAATGGG 57.215 32.000 9.01 4.99 45.06 4.00
454 455 9.890629 AGTCTTGCATGTAATTTAGAGATAACA 57.109 29.630 0.00 0.00 0.00 2.41
467 468 9.371136 CAGTCTTATCTTAAGTCTTGCATGTAA 57.629 33.333 1.63 0.00 0.00 2.41
468 469 8.531982 ACAGTCTTATCTTAAGTCTTGCATGTA 58.468 33.333 1.63 0.00 0.00 2.29
469 470 7.390027 ACAGTCTTATCTTAAGTCTTGCATGT 58.610 34.615 1.63 0.00 0.00 3.21
470 471 7.763528 AGACAGTCTTATCTTAAGTCTTGCATG 59.236 37.037 0.00 0.00 31.38 4.06
471 472 7.846066 AGACAGTCTTATCTTAAGTCTTGCAT 58.154 34.615 0.00 0.00 31.38 3.96
472 473 7.233389 AGACAGTCTTATCTTAAGTCTTGCA 57.767 36.000 0.00 0.00 31.38 4.08
473 474 9.810545 ATAAGACAGTCTTATCTTAAGTCTTGC 57.189 33.333 24.76 0.00 44.03 4.01
487 488 9.896645 ATGTACAATGATTGATAAGACAGTCTT 57.103 29.630 19.81 19.81 40.35 3.01
488 489 9.322773 CATGTACAATGATTGATAAGACAGTCT 57.677 33.333 12.80 0.00 0.00 3.24
489 490 8.066595 GCATGTACAATGATTGATAAGACAGTC 58.933 37.037 12.80 0.00 0.00 3.51
490 491 7.012704 GGCATGTACAATGATTGATAAGACAGT 59.987 37.037 12.80 0.00 0.00 3.55
491 492 7.358066 GGCATGTACAATGATTGATAAGACAG 58.642 38.462 12.80 4.11 0.00 3.51
492 493 6.262944 GGGCATGTACAATGATTGATAAGACA 59.737 38.462 12.80 7.87 0.00 3.41
493 494 6.488006 AGGGCATGTACAATGATTGATAAGAC 59.512 38.462 12.80 0.00 0.00 3.01
494 495 6.604171 AGGGCATGTACAATGATTGATAAGA 58.396 36.000 12.80 0.00 0.00 2.10
495 496 6.487668 TGAGGGCATGTACAATGATTGATAAG 59.512 38.462 12.80 0.00 0.00 1.73
496 497 6.262944 GTGAGGGCATGTACAATGATTGATAA 59.737 38.462 12.80 0.00 0.00 1.75
497 498 5.764686 GTGAGGGCATGTACAATGATTGATA 59.235 40.000 12.80 0.00 0.00 2.15
498 499 4.581824 GTGAGGGCATGTACAATGATTGAT 59.418 41.667 12.80 0.00 0.00 2.57
499 500 3.947196 GTGAGGGCATGTACAATGATTGA 59.053 43.478 12.80 0.00 0.00 2.57
500 501 3.695556 TGTGAGGGCATGTACAATGATTG 59.304 43.478 3.16 3.16 0.00 2.67
501 502 3.696051 GTGTGAGGGCATGTACAATGATT 59.304 43.478 0.00 0.00 0.00 2.57
502 503 3.282021 GTGTGAGGGCATGTACAATGAT 58.718 45.455 0.00 0.00 0.00 2.45
503 504 2.710377 GTGTGAGGGCATGTACAATGA 58.290 47.619 0.00 0.00 0.00 2.57
504 505 1.398041 CGTGTGAGGGCATGTACAATG 59.602 52.381 0.00 0.12 0.00 2.82
505 506 1.737838 CGTGTGAGGGCATGTACAAT 58.262 50.000 0.00 0.00 0.00 2.71
506 507 0.953471 GCGTGTGAGGGCATGTACAA 60.953 55.000 0.00 0.00 0.00 2.41
507 508 1.375396 GCGTGTGAGGGCATGTACA 60.375 57.895 0.00 0.00 0.00 2.90
508 509 0.953471 TTGCGTGTGAGGGCATGTAC 60.953 55.000 0.00 0.00 39.21 2.90
509 510 0.250510 TTTGCGTGTGAGGGCATGTA 60.251 50.000 0.00 0.00 39.21 2.29
510 511 1.518056 CTTTGCGTGTGAGGGCATGT 61.518 55.000 0.00 0.00 39.21 3.21
511 512 1.210931 CTTTGCGTGTGAGGGCATG 59.789 57.895 0.00 0.00 39.21 4.06
512 513 1.973281 CCTTTGCGTGTGAGGGCAT 60.973 57.895 0.00 0.00 39.21 4.40
513 514 2.594303 CCTTTGCGTGTGAGGGCA 60.594 61.111 0.00 0.00 37.39 5.36
514 515 4.043200 GCCTTTGCGTGTGAGGGC 62.043 66.667 0.00 0.00 0.00 5.19
515 516 2.594303 TGCCTTTGCGTGTGAGGG 60.594 61.111 0.00 0.00 41.78 4.30
516 517 2.639286 GTGCCTTTGCGTGTGAGG 59.361 61.111 0.00 0.00 41.78 3.86
517 518 2.249309 CGTGCCTTTGCGTGTGAG 59.751 61.111 0.00 0.00 41.78 3.51
547 548 7.014422 TGGGTTAAAAATTACACTGATTCGGTT 59.986 33.333 0.00 0.00 0.00 4.44
549 550 6.915349 TGGGTTAAAAATTACACTGATTCGG 58.085 36.000 0.00 0.00 0.00 4.30
588 589 1.411246 ACGAGGCAGTGTGTTCAGTAA 59.589 47.619 0.00 0.00 0.00 2.24
589 590 1.037493 ACGAGGCAGTGTGTTCAGTA 58.963 50.000 0.00 0.00 0.00 2.74
590 591 0.178068 AACGAGGCAGTGTGTTCAGT 59.822 50.000 0.00 0.00 0.00 3.41
620 622 1.611519 CCGGACAAACCAAGGCTTTA 58.388 50.000 0.00 0.00 38.90 1.85
668 672 1.325476 GCAAGGGATCAAAGGCCTGG 61.325 60.000 5.69 1.07 0.00 4.45
675 679 1.259609 CTGCCAAGCAAGGGATCAAA 58.740 50.000 0.00 0.00 38.41 2.69
988 2282 2.033151 CGTTTTATAGCTAGCGGGCAAC 60.033 50.000 9.55 9.07 34.17 4.17
990 2284 1.860676 CGTTTTATAGCTAGCGGGCA 58.139 50.000 9.55 0.00 34.17 5.36
991 2285 0.511653 GCGTTTTATAGCTAGCGGGC 59.488 55.000 9.55 1.63 0.00 6.13
992 2286 1.145803 GGCGTTTTATAGCTAGCGGG 58.854 55.000 9.55 0.00 0.00 6.13
993 2287 1.792949 CAGGCGTTTTATAGCTAGCGG 59.207 52.381 9.55 0.00 0.00 5.52
1116 2410 2.925563 CCGCCATTGCTTCAAATTTCTC 59.074 45.455 0.00 0.00 34.43 2.87
1139 2433 2.358737 CCGAACACCTGCAGACCC 60.359 66.667 17.39 0.00 0.00 4.46
1292 2586 0.769247 TGGAGATGGCAGGGATGATG 59.231 55.000 0.00 0.00 0.00 3.07
1307 2602 1.074889 TGCATGGATGGATGGATGGAG 59.925 52.381 0.00 0.00 0.00 3.86
1308 2603 1.150872 TGCATGGATGGATGGATGGA 58.849 50.000 0.00 0.00 0.00 3.41
1310 2605 2.100197 GGATGCATGGATGGATGGATG 58.900 52.381 2.46 0.00 39.04 3.51
1311 2606 1.714217 TGGATGCATGGATGGATGGAT 59.286 47.619 2.46 0.00 39.04 3.41
1312 2607 1.150872 TGGATGCATGGATGGATGGA 58.849 50.000 2.46 0.00 39.04 3.41
1313 2608 1.824852 CATGGATGCATGGATGGATGG 59.175 52.381 18.76 0.00 39.04 3.51
1325 2620 1.180029 AGAAAGTGCACCATGGATGC 58.820 50.000 21.47 23.17 43.68 3.91
1326 2621 5.587388 ATTAAGAAAGTGCACCATGGATG 57.413 39.130 21.47 14.07 0.00 3.51
1380 2683 4.121691 ATCGAGACGGACGATCGT 57.878 55.556 22.97 22.97 45.32 3.73
1385 2688 1.297967 CTGCAGATCGAGACGGACG 60.298 63.158 8.42 0.00 0.00 4.79
1386 2689 1.064946 CCTGCAGATCGAGACGGAC 59.935 63.158 17.39 0.00 0.00 4.79
1387 2690 0.466372 ATCCTGCAGATCGAGACGGA 60.466 55.000 17.39 0.83 0.00 4.69
1388 2691 0.039617 GATCCTGCAGATCGAGACGG 60.040 60.000 17.39 0.00 42.06 4.79
1396 2708 0.833834 CCCGGTAGGATCCTGCAGAT 60.834 60.000 28.38 6.84 41.02 2.90
1424 2736 2.622942 GGTCTTGTCACCATGCTTGAAA 59.377 45.455 0.22 0.00 36.32 2.69
1476 2789 1.336440 CAATCGGTGTGCTGTTTTGGA 59.664 47.619 0.00 0.00 0.00 3.53
1477 2790 1.336440 TCAATCGGTGTGCTGTTTTGG 59.664 47.619 0.00 0.00 0.00 3.28
1512 2833 5.994668 AGAAGAGAAGACAAGAACCACATTC 59.005 40.000 0.00 0.00 37.62 2.67
1525 2846 1.620819 TCTGCCACCAGAAGAGAAGAC 59.379 52.381 0.00 0.00 44.79 3.01
1564 2889 1.141053 GGGAACTGGGTGCATAGGTAG 59.859 57.143 0.00 0.00 0.00 3.18
1661 2986 4.778415 GGCGTCGAAGCTCTGCGA 62.778 66.667 22.38 0.00 37.29 5.10
1693 3018 1.002011 GAAGGCCAGGTGGAAGACC 60.002 63.158 5.01 0.00 46.58 3.85
1723 3048 1.672854 CCTCGTCGGGGAGCATGTTA 61.673 60.000 4.69 0.00 32.57 2.41
1763 3088 4.639776 CATCTGCTGCAGCTTCCT 57.360 55.556 36.61 17.53 42.66 3.36
1892 3217 1.539869 TGAAGAGCTTCCTGCCCCT 60.540 57.895 7.69 0.00 44.23 4.79
2031 3362 4.738198 CCGATGGATGACAGACGG 57.262 61.111 0.00 0.00 42.92 4.79
2043 3374 2.034179 AGATTCATGCATGTTGCCGATG 59.966 45.455 25.43 0.00 44.23 3.84
2075 3410 1.676529 ACGGAGACATCACGGTATGAG 59.323 52.381 6.29 0.00 41.91 2.90
2272 3620 5.470098 ACATGTAAGACAAACGAGCAAGAAT 59.530 36.000 0.00 0.00 0.00 2.40
2308 3662 4.353777 TCATCTACAAAGTAGGCTCCTGT 58.646 43.478 0.00 0.00 0.00 4.00
2338 3692 8.615211 TCATTTGTGTCTTAGAACATGCATATC 58.385 33.333 0.00 0.64 0.00 1.63
2365 3719 9.275398 ACTGTCATCATGCAACATTAAAATTTT 57.725 25.926 8.75 8.75 0.00 1.82
2367 3721 8.089597 TCACTGTCATCATGCAACATTAAAATT 58.910 29.630 0.00 0.00 0.00 1.82
2373 3727 3.192001 GGTCACTGTCATCATGCAACATT 59.808 43.478 0.00 0.00 0.00 2.71
2503 3861 2.555732 TCGGGGGTAACTCATTAGGT 57.444 50.000 0.00 0.00 41.13 3.08
2505 3863 4.021894 CAGAGATCGGGGGTAACTCATTAG 60.022 50.000 0.00 0.00 41.13 1.73
2507 3865 2.700897 CAGAGATCGGGGGTAACTCATT 59.299 50.000 0.00 0.00 41.13 2.57
2514 3872 1.968493 GTTATGCAGAGATCGGGGGTA 59.032 52.381 0.00 0.00 0.00 3.69
2519 3877 5.403766 GTCATGTTAGTTATGCAGAGATCGG 59.596 44.000 0.00 0.00 0.00 4.18
2523 3881 6.286240 AGTGTCATGTTAGTTATGCAGAGA 57.714 37.500 0.00 0.00 0.00 3.10
2550 3919 3.884037 ATGTTGGTTTCTTCCCAGACT 57.116 42.857 0.00 0.00 32.49 3.24
2556 3925 3.096092 TGCCCATATGTTGGTTTCTTCC 58.904 45.455 1.24 0.00 44.83 3.46
2557 3926 4.021544 TGTTGCCCATATGTTGGTTTCTTC 60.022 41.667 1.24 0.00 44.83 2.87
2560 3930 3.951775 TGTTGCCCATATGTTGGTTTC 57.048 42.857 1.24 0.00 44.83 2.78
2566 3936 5.754782 TGACTCTATTGTTGCCCATATGTT 58.245 37.500 1.24 0.00 0.00 2.71
2573 3943 6.166982 GTCCTATATGACTCTATTGTTGCCC 58.833 44.000 1.26 0.00 32.39 5.36
2637 4007 3.228453 CATGGGAGGCAGCATAATCTTT 58.772 45.455 0.00 0.00 0.00 2.52
2638 4008 2.176364 ACATGGGAGGCAGCATAATCTT 59.824 45.455 0.00 0.00 0.00 2.40
2679 4050 3.181479 TGTGTATGCGATTGGAGTAGGTC 60.181 47.826 0.00 0.00 0.00 3.85
2683 4054 2.480587 CGGTGTGTATGCGATTGGAGTA 60.481 50.000 0.00 0.00 0.00 2.59
2706 4077 6.380095 ACAAAGTAACAACCGCTATTCAAA 57.620 33.333 0.00 0.00 0.00 2.69
2752 4123 1.513178 CAGTTATACGCACTCGCTTCG 59.487 52.381 0.00 0.00 39.84 3.79
2767 4138 8.458573 TCTCCTTTGCAAGTTATTTTCAGTTA 57.541 30.769 0.00 0.00 0.00 2.24
2832 4203 9.533253 GTGTATGGCTTATTATGATTGCTTTTT 57.467 29.630 0.00 0.00 0.00 1.94
2833 4204 8.917088 AGTGTATGGCTTATTATGATTGCTTTT 58.083 29.630 0.00 0.00 0.00 2.27
2839 4210 8.850156 GGTGAAAGTGTATGGCTTATTATGATT 58.150 33.333 0.00 0.00 0.00 2.57
2861 4232 3.109151 AGGGTCAATACGTTATGGGTGA 58.891 45.455 0.00 0.00 0.00 4.02
2875 4249 4.384427 GGACGGTATTCCAAATAGGGTCAA 60.384 45.833 10.05 0.00 38.24 3.18
2920 4295 7.947890 CCAATTATACCCACCCATAAGTGTTAT 59.052 37.037 0.00 0.00 33.19 1.89
2921 4296 7.129038 TCCAATTATACCCACCCATAAGTGTTA 59.871 37.037 0.00 0.00 33.19 2.41
2929 4304 5.147032 CAACATCCAATTATACCCACCCAT 58.853 41.667 0.00 0.00 0.00 4.00
2937 4312 8.686334 AGTCATCCAAACAACATCCAATTATAC 58.314 33.333 0.00 0.00 0.00 1.47
2952 4327 8.499162 GCATACTACATGATTAGTCATCCAAAC 58.501 37.037 0.00 0.00 43.14 2.93
2964 4339 5.118990 AGAGTTTGCGCATACTACATGATT 58.881 37.500 29.46 8.92 0.00 2.57
2976 4351 0.597568 CCATTGGAAGAGTTTGCGCA 59.402 50.000 5.66 5.66 0.00 6.09
3214 4590 4.922719 TCTTGTTTTCCGTGCGTAATTTT 58.077 34.783 0.00 0.00 0.00 1.82
3215 4591 4.035909 ACTCTTGTTTTCCGTGCGTAATTT 59.964 37.500 0.00 0.00 0.00 1.82
3218 4594 2.553086 ACTCTTGTTTTCCGTGCGTAA 58.447 42.857 0.00 0.00 0.00 3.18
3219 4595 2.228138 ACTCTTGTTTTCCGTGCGTA 57.772 45.000 0.00 0.00 0.00 4.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.