Multiple sequence alignment - TraesCS5A01G501800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G501800 chr5A 100.000 6863 0 0 1 6863 667077613 667070751 0.000000e+00 12674.0
1 TraesCS5A01G501800 chr5A 97.059 34 0 1 4823 4855 472578632 472578665 1.000000e-03 56.5
2 TraesCS5A01G501800 chr4B 87.908 3374 164 76 21 3294 621332876 621329647 0.000000e+00 3746.0
3 TraesCS5A01G501800 chr4B 94.935 1382 65 4 3291 4672 621329608 621328232 0.000000e+00 2159.0
4 TraesCS5A01G501800 chr4B 89.557 1446 97 37 4851 6271 621328236 621326820 0.000000e+00 1784.0
5 TraesCS5A01G501800 chr4B 84.916 179 15 2 6622 6798 621326552 621326384 3.290000e-38 171.0
6 TraesCS5A01G501800 chr4D 89.892 2127 87 48 455 2514 486644739 486642674 0.000000e+00 2619.0
7 TraesCS5A01G501800 chr4D 94.428 1382 48 11 3291 4672 486641805 486640453 0.000000e+00 2098.0
8 TraesCS5A01G501800 chr4D 91.548 1053 51 17 5249 6269 486639929 486638883 0.000000e+00 1417.0
9 TraesCS5A01G501800 chr4D 93.609 845 27 7 2464 3294 486642675 486641844 0.000000e+00 1236.0
10 TraesCS5A01G501800 chr4D 96.259 294 9 2 4851 5143 486640457 486640165 1.340000e-131 481.0
11 TraesCS5A01G501800 chr4D 92.199 141 5 1 5128 5268 486640072 486639938 1.950000e-45 195.0
12 TraesCS5A01G501800 chr4D 81.761 159 25 4 6502 6656 486638840 486638682 5.590000e-26 130.0
13 TraesCS5A01G501800 chr3D 96.753 154 2 1 4673 4823 168497970 168498123 3.180000e-63 254.0
14 TraesCS5A01G501800 chr3D 94.969 159 5 1 4668 4823 168496482 168496640 5.320000e-61 246.0
15 TraesCS5A01G501800 chr3D 94.595 37 1 1 4823 4858 168498206 168498242 1.000000e-03 56.5
16 TraesCS5A01G501800 chr2D 96.753 154 2 1 4673 4823 343674337 343674184 3.180000e-63 254.0
17 TraesCS5A01G501800 chr2D 77.591 357 77 3 51 406 322128721 322128367 5.390000e-51 213.0
18 TraesCS5A01G501800 chr2D 82.051 78 14 0 296 373 98662787 98662710 4.440000e-07 67.6
19 TraesCS5A01G501800 chr2D 100.000 29 0 0 6730 6758 9747815 9747787 3.000000e-03 54.7
20 TraesCS5A01G501800 chr3A 96.667 150 4 1 4673 4822 359335515 359335367 1.480000e-61 248.0
21 TraesCS5A01G501800 chr3A 96.078 153 3 1 4673 4822 359337251 359337099 5.320000e-61 246.0
22 TraesCS5A01G501800 chr3A 83.333 66 5 5 4824 4887 249857089 249857150 1.000000e-03 56.5
23 TraesCS5A01G501800 chr3A 90.244 41 3 1 4823 4863 663592454 663592493 1.200000e-02 52.8
24 TraesCS5A01G501800 chr2A 96.078 153 5 1 4671 4822 699438157 699438005 1.480000e-61 248.0
25 TraesCS5A01G501800 chr2A 76.536 358 79 5 52 406 74695453 74695808 2.530000e-44 191.0
26 TraesCS5A01G501800 chr2A 76.619 278 65 0 128 405 4903423 4903700 3.310000e-33 154.0
27 TraesCS5A01G501800 chr7D 95.484 155 4 1 4672 4823 599046472 599046626 1.910000e-60 244.0
28 TraesCS5A01G501800 chr7D 92.398 171 7 4 4657 4822 467993812 467993981 8.900000e-59 239.0
29 TraesCS5A01G501800 chr7D 74.590 366 81 12 47 406 91824022 91824381 4.290000e-32 150.0
30 TraesCS5A01G501800 chr7D 73.003 363 84 8 47 406 623502686 623503037 1.560000e-21 115.0
31 TraesCS5A01G501800 chr1A 90.556 180 9 5 4650 4822 372230792 372230970 1.490000e-56 231.0
32 TraesCS5A01G501800 chr6D 77.528 356 69 9 51 401 103206055 103206404 3.250000e-48 204.0
33 TraesCS5A01G501800 chr6B 77.707 314 60 9 97 406 585794577 585794884 4.230000e-42 183.0
34 TraesCS5A01G501800 chr6B 92.308 39 0 2 4823 4861 225541133 225541098 1.200000e-02 52.8
35 TraesCS5A01G501800 chr3B 81.333 225 33 6 6273 6490 632607183 632607405 2.540000e-39 174.0
36 TraesCS5A01G501800 chr1B 76.401 339 66 10 72 407 502140975 502140648 3.290000e-38 171.0
37 TraesCS5A01G501800 chr1B 97.059 34 1 0 4823 4856 359444381 359444414 2.670000e-04 58.4
38 TraesCS5A01G501800 chr5D 77.817 284 54 6 126 406 495020432 495020155 4.260000e-37 167.0
39 TraesCS5A01G501800 chr5D 74.845 322 70 11 49 365 108170644 108170959 1.200000e-27 135.0
40 TraesCS5A01G501800 chr5D 76.078 255 43 14 157 406 73468971 73469212 4.350000e-22 117.0
41 TraesCS5A01G501800 chr7A 80.556 216 27 12 6288 6495 648844709 648844501 1.190000e-32 152.0
42 TraesCS5A01G501800 chr6A 75.472 318 70 6 51 365 603199078 603198766 1.540000e-31 148.0
43 TraesCS5A01G501800 chr6A 94.444 36 2 0 4824 4859 252840894 252840859 1.000000e-03 56.5
44 TraesCS5A01G501800 chr4A 81.212 165 29 2 243 406 578379136 578378973 1.550000e-26 132.0
45 TraesCS5A01G501800 chr4A 75.546 229 56 0 168 396 82395775 82396003 5.630000e-21 113.0
46 TraesCS5A01G501800 chr7B 73.025 367 84 14 47 406 42753591 42753233 1.560000e-21 115.0
47 TraesCS5A01G501800 chr7B 72.549 357 92 6 52 406 742548530 742548882 2.020000e-20 111.0
48 TraesCS5A01G501800 chr7B 81.119 143 17 7 6730 6862 275007986 275007844 9.410000e-19 106.0
49 TraesCS5A01G501800 chrUn 100.000 31 0 0 4824 4854 228898086 228898056 2.670000e-04 58.4
50 TraesCS5A01G501800 chr5B 97.059 34 1 0 4823 4856 497161095 497161062 2.670000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G501800 chr5A 667070751 667077613 6862 True 12674 12674 100.000000 1 6863 1 chr5A.!!$R1 6862
1 TraesCS5A01G501800 chr4B 621326384 621332876 6492 True 1965 3746 89.329000 21 6798 4 chr4B.!!$R1 6777
2 TraesCS5A01G501800 chr4D 486638682 486644739 6057 True 1168 2619 91.385143 455 6656 7 chr4D.!!$R1 6201
3 TraesCS5A01G501800 chr3A 359335367 359337251 1884 True 247 248 96.372500 4673 4822 2 chr3A.!!$R1 149

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 207 0.102481 CCGGTCCTCATTCACCTACG 59.898 60.000 0.00 0.00 0.00 3.51 F
263 264 0.239879 TTTTCTTCATTGACGGCGGC 59.760 50.000 13.24 9.67 0.00 6.53 F
291 292 0.242825 TGACGCCTTGGTCTTACGAG 59.757 55.000 0.00 0.00 37.81 4.18 F
294 295 0.242825 CGCCTTGGTCTTACGAGTCA 59.757 55.000 0.00 0.00 0.00 3.41 F
394 395 0.317687 GCTTAGGCTCGCCGTAGTAC 60.318 60.000 1.69 0.00 41.95 2.73 F
399 400 0.734889 GGCTCGCCGTAGTACTTGTA 59.265 55.000 0.00 0.00 0.00 2.41 F
974 1029 0.884704 TAGATACGTACCCCGCCGTC 60.885 60.000 0.00 0.00 41.42 4.79 F
2444 2563 1.002888 CCTTGATGCTCAGGTGAGTGT 59.997 52.381 8.74 0.00 43.85 3.55 F
3967 4195 0.179012 ACATCCCCAAAAACGTCCGT 60.179 50.000 0.00 0.00 0.00 4.69 F
4012 4240 0.387112 TGTTCCGTATTCGTTCGCGT 60.387 50.000 5.77 0.00 42.11 6.01 F
4358 4586 2.812613 GCCTTTGCTACAGGGTGTTACA 60.813 50.000 0.00 0.00 31.20 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1324 1402 0.542702 AGCCCCAAATTCACCACCAG 60.543 55.000 0.00 0.0 0.00 4.00 R
1437 1515 1.152881 GATTCTTGCCGCCTGGGAT 60.153 57.895 0.00 0.0 38.47 3.85 R
1440 1518 2.045045 TGGATTCTTGCCGCCTGG 60.045 61.111 0.00 0.0 38.77 4.45 R
1444 1522 2.859992 AGAACTGGATTCTTGCCGC 58.140 52.632 0.00 0.0 46.05 6.53 R
2352 2471 1.472878 TCGATTAGCTGAGTCGCAAGT 59.527 47.619 11.02 0.0 35.48 3.16 R
2504 2672 4.083802 GGAGACCATTAATGCAACGATAGC 60.084 45.833 10.11 0.0 42.67 2.97 R
3064 3245 3.589951 ACATATTCCCAAGCAGCAGAT 57.410 42.857 0.00 0.0 0.00 2.90 R
4254 4482 1.349688 ACACCACGGGAACACACATAT 59.650 47.619 0.00 0.0 0.00 1.78 R
5423 5979 1.459450 TTTCCTACCGCCATGCTTTC 58.541 50.000 0.00 0.0 0.00 2.62 R
5428 5984 1.597742 CAGGATTTCCTACCGCCATG 58.402 55.000 0.00 0.0 46.65 3.66 R
6419 7089 0.325671 CCTCCACCCAGCTTCTCCTA 60.326 60.000 0.00 0.0 0.00 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.009900 CCGCCTCGTCTCGTATGAC 60.010 63.158 0.00 0.00 0.00 3.06
40 41 1.009900 CGCCTCGTCTCGTATGACC 60.010 63.158 0.00 0.00 33.70 4.02
42 43 1.647629 CCTCGTCTCGTATGACCCG 59.352 63.158 0.00 0.00 33.70 5.28
49 50 3.181507 CGTCTCGTATGACCCGTTTTCTA 60.182 47.826 0.00 0.00 33.70 2.10
56 57 5.006358 CGTATGACCCGTTTTCTAAAGATGG 59.994 44.000 0.00 0.00 0.00 3.51
63 64 7.399634 ACCCGTTTTCTAAAGATGGAATAAGA 58.600 34.615 0.00 0.00 0.00 2.10
66 67 9.722056 CCGTTTTCTAAAGATGGAATAAGATTG 57.278 33.333 0.00 0.00 0.00 2.67
67 68 9.226345 CGTTTTCTAAAGATGGAATAAGATTGC 57.774 33.333 0.00 0.00 0.00 3.56
75 76 1.239347 GAATAAGATTGCCCTCGCCC 58.761 55.000 0.00 0.00 0.00 6.13
77 78 0.109342 ATAAGATTGCCCTCGCCCAG 59.891 55.000 0.00 0.00 0.00 4.45
78 79 2.608970 TAAGATTGCCCTCGCCCAGC 62.609 60.000 0.00 0.00 0.00 4.85
103 104 4.148825 CCGGCGGTGCTTCTAGCT 62.149 66.667 19.97 0.00 42.97 3.32
108 109 1.414527 GCGGTGCTTCTAGCTTCGTC 61.415 60.000 0.00 5.30 42.97 4.20
112 113 0.885879 TGCTTCTAGCTTCGTCGGAA 59.114 50.000 0.00 0.00 42.97 4.30
139 140 2.601666 AGCTGTGTCTCTGGCGGA 60.602 61.111 0.00 0.00 0.00 5.54
159 160 1.064946 CTCGTGAGATCTGGTCGGC 59.935 63.158 0.00 0.00 40.84 5.54
164 165 0.389817 TGAGATCTGGTCGGCGTTTG 60.390 55.000 6.85 0.00 0.00 2.93
170 171 1.886861 CTGGTCGGCGTTTGTCTTCG 61.887 60.000 6.85 0.00 0.00 3.79
176 177 0.953960 GGCGTTTGTCTTCGGTGGAT 60.954 55.000 0.00 0.00 0.00 3.41
177 178 0.442699 GCGTTTGTCTTCGGTGGATC 59.557 55.000 0.00 0.00 0.00 3.36
206 207 0.102481 CCGGTCCTCATTCACCTACG 59.898 60.000 0.00 0.00 0.00 3.51
233 234 0.322546 GTCTGCGGGTTGGATCCTTT 60.323 55.000 14.23 0.00 0.00 3.11
245 246 1.941325 GATCCTTTCGATCCACGCTT 58.059 50.000 0.00 0.00 41.51 4.68
246 247 2.280628 GATCCTTTCGATCCACGCTTT 58.719 47.619 0.00 0.00 41.51 3.51
254 255 3.334691 TCGATCCACGCTTTTCTTCATT 58.665 40.909 0.00 0.00 42.26 2.57
255 256 3.125146 TCGATCCACGCTTTTCTTCATTG 59.875 43.478 0.00 0.00 42.26 2.82
256 257 3.125146 CGATCCACGCTTTTCTTCATTGA 59.875 43.478 0.00 0.00 34.51 2.57
263 264 0.239879 TTTTCTTCATTGACGGCGGC 59.760 50.000 13.24 9.67 0.00 6.53
274 275 2.664851 CGGCGGCTGTTGTTCTGA 60.665 61.111 7.61 0.00 0.00 3.27
275 276 2.946762 GGCGGCTGTTGTTCTGAC 59.053 61.111 0.00 0.00 0.00 3.51
277 278 2.551270 CGGCTGTTGTTCTGACGC 59.449 61.111 0.00 0.00 39.43 5.19
278 279 2.946762 GGCTGTTGTTCTGACGCC 59.053 61.111 0.00 0.00 32.62 5.68
279 280 1.598130 GGCTGTTGTTCTGACGCCT 60.598 57.895 0.00 0.00 35.39 5.52
286 287 0.468226 TGTTCTGACGCCTTGGTCTT 59.532 50.000 0.00 0.00 37.81 3.01
287 288 1.689813 TGTTCTGACGCCTTGGTCTTA 59.310 47.619 0.00 0.00 37.81 2.10
288 289 2.067013 GTTCTGACGCCTTGGTCTTAC 58.933 52.381 0.00 0.00 37.81 2.34
291 292 0.242825 TGACGCCTTGGTCTTACGAG 59.757 55.000 0.00 0.00 37.81 4.18
292 293 0.243095 GACGCCTTGGTCTTACGAGT 59.757 55.000 0.00 0.00 34.09 4.18
294 295 0.242825 CGCCTTGGTCTTACGAGTCA 59.757 55.000 0.00 0.00 0.00 3.41
295 296 1.135083 CGCCTTGGTCTTACGAGTCAT 60.135 52.381 0.00 0.00 0.00 3.06
296 297 2.674177 CGCCTTGGTCTTACGAGTCATT 60.674 50.000 0.00 0.00 0.00 2.57
297 298 3.428452 CGCCTTGGTCTTACGAGTCATTA 60.428 47.826 0.00 0.00 0.00 1.90
298 299 4.113354 GCCTTGGTCTTACGAGTCATTAG 58.887 47.826 0.00 0.00 0.00 1.73
299 300 4.113354 CCTTGGTCTTACGAGTCATTAGC 58.887 47.826 0.00 0.00 0.00 3.09
300 301 4.381612 CCTTGGTCTTACGAGTCATTAGCA 60.382 45.833 0.00 0.00 0.00 3.49
301 302 4.794278 TGGTCTTACGAGTCATTAGCAA 57.206 40.909 0.00 0.00 0.00 3.91
302 303 4.744570 TGGTCTTACGAGTCATTAGCAAG 58.255 43.478 0.00 0.00 0.00 4.01
303 304 4.461431 TGGTCTTACGAGTCATTAGCAAGA 59.539 41.667 0.00 0.00 0.00 3.02
304 305 5.127194 TGGTCTTACGAGTCATTAGCAAGAT 59.873 40.000 0.00 0.00 0.00 2.40
305 306 5.460419 GGTCTTACGAGTCATTAGCAAGATG 59.540 44.000 0.00 0.00 0.00 2.90
306 307 6.266323 GTCTTACGAGTCATTAGCAAGATGA 58.734 40.000 0.00 0.00 0.00 2.92
314 315 6.408858 GTCATTAGCAAGATGACTTTTCGA 57.591 37.500 15.61 0.00 46.19 3.71
315 316 6.244275 GTCATTAGCAAGATGACTTTTCGAC 58.756 40.000 15.61 0.00 46.19 4.20
316 317 6.091441 GTCATTAGCAAGATGACTTTTCGACT 59.909 38.462 15.61 0.00 46.19 4.18
317 318 5.845985 TTAGCAAGATGACTTTTCGACTG 57.154 39.130 0.00 0.00 33.70 3.51
318 319 3.733337 AGCAAGATGACTTTTCGACTGT 58.267 40.909 0.00 0.00 33.70 3.55
324 325 5.704888 AGATGACTTTTCGACTGTCTACTG 58.295 41.667 6.21 0.00 0.00 2.74
332 333 3.990092 TCGACTGTCTACTGCAACAATT 58.010 40.909 6.21 0.00 0.00 2.32
334 335 4.211164 TCGACTGTCTACTGCAACAATTTG 59.789 41.667 6.21 0.00 35.62 2.32
336 337 5.504010 CGACTGTCTACTGCAACAATTTGTT 60.504 40.000 8.97 8.97 42.08 2.83
354 355 2.444706 CCCGGCTCTGATGAGGGA 60.445 66.667 0.00 0.00 44.70 4.20
359 360 2.817056 GCTCTGATGAGGGAGGGGC 61.817 68.421 0.00 0.00 40.53 5.80
365 366 1.151943 ATGAGGGAGGGGCGATGAT 60.152 57.895 0.00 0.00 0.00 2.45
367 368 3.543536 GAGGGAGGGGCGATGATGC 62.544 68.421 0.00 0.00 0.00 3.91
393 394 1.450531 GGCTTAGGCTCGCCGTAGTA 61.451 60.000 11.38 0.00 41.95 1.82
394 395 0.317687 GCTTAGGCTCGCCGTAGTAC 60.318 60.000 1.69 0.00 41.95 2.73
395 396 1.307097 CTTAGGCTCGCCGTAGTACT 58.693 55.000 0.00 0.00 41.95 2.73
396 397 1.674962 CTTAGGCTCGCCGTAGTACTT 59.325 52.381 0.00 0.00 41.95 2.24
398 399 0.964358 AGGCTCGCCGTAGTACTTGT 60.964 55.000 0.00 0.00 41.95 3.16
399 400 0.734889 GGCTCGCCGTAGTACTTGTA 59.265 55.000 0.00 0.00 0.00 2.41
400 401 1.268437 GGCTCGCCGTAGTACTTGTAG 60.268 57.143 0.00 0.00 0.00 2.74
401 402 1.399791 GCTCGCCGTAGTACTTGTAGT 59.600 52.381 0.00 0.00 0.00 2.73
402 403 2.538535 GCTCGCCGTAGTACTTGTAGTC 60.539 54.545 0.00 0.00 0.00 2.59
403 404 1.660607 TCGCCGTAGTACTTGTAGTCG 59.339 52.381 0.00 0.00 0.00 4.18
404 405 1.394917 CGCCGTAGTACTTGTAGTCGT 59.605 52.381 0.00 0.00 0.00 4.34
425 426 6.817140 GTCGTCTGGATGTAATTTTTACTCCT 59.183 38.462 12.72 0.00 0.00 3.69
427 428 6.816640 CGTCTGGATGTAATTTTTACTCCTGA 59.183 38.462 14.22 14.22 0.00 3.86
442 456 5.965033 ACTCCTGATGTTAGTTGATGGAT 57.035 39.130 0.00 0.00 0.00 3.41
445 459 6.841229 ACTCCTGATGTTAGTTGATGGATAGA 59.159 38.462 0.00 0.00 0.00 1.98
447 461 7.901029 TCCTGATGTTAGTTGATGGATAGATC 58.099 38.462 0.00 0.00 0.00 2.75
451 465 8.421002 TGATGTTAGTTGATGGATAGATCGAAA 58.579 33.333 0.00 0.00 0.00 3.46
452 466 8.824159 ATGTTAGTTGATGGATAGATCGAAAG 57.176 34.615 0.00 0.00 0.00 2.62
478 492 7.831691 TTGAAAATAGAATGAAACACCTCCA 57.168 32.000 0.00 0.00 0.00 3.86
479 493 7.831691 TGAAAATAGAATGAAACACCTCCAA 57.168 32.000 0.00 0.00 0.00 3.53
480 494 8.243961 TGAAAATAGAATGAAACACCTCCAAA 57.756 30.769 0.00 0.00 0.00 3.28
481 495 8.141268 TGAAAATAGAATGAAACACCTCCAAAC 58.859 33.333 0.00 0.00 0.00 2.93
544 564 3.522731 GGCGTTGCACACCCACAA 61.523 61.111 0.00 0.00 0.00 3.33
545 565 2.278531 GCGTTGCACACCCACAAC 60.279 61.111 0.00 0.00 42.15 3.32
547 567 2.278531 GTTGCACACCCACAACGC 60.279 61.111 0.00 0.00 37.08 4.84
548 568 3.522731 TTGCACACCCACAACGCC 61.523 61.111 0.00 0.00 0.00 5.68
549 569 4.803908 TGCACACCCACAACGCCA 62.804 61.111 0.00 0.00 0.00 5.69
550 570 4.264638 GCACACCCACAACGCCAC 62.265 66.667 0.00 0.00 0.00 5.01
551 571 3.591835 CACACCCACAACGCCACC 61.592 66.667 0.00 0.00 0.00 4.61
617 637 4.947147 GTCCCACACGCCAGCCAA 62.947 66.667 0.00 0.00 0.00 4.52
618 638 4.196778 TCCCACACGCCAGCCAAA 62.197 61.111 0.00 0.00 0.00 3.28
619 639 3.977244 CCCACACGCCAGCCAAAC 61.977 66.667 0.00 0.00 0.00 2.93
620 640 3.977244 CCACACGCCAGCCAAACC 61.977 66.667 0.00 0.00 0.00 3.27
621 641 3.977244 CACACGCCAGCCAAACCC 61.977 66.667 0.00 0.00 0.00 4.11
624 644 4.974721 ACGCCAGCCAAACCCCAG 62.975 66.667 0.00 0.00 0.00 4.45
685 705 4.271016 GGGCCCCGTGATCCCATC 62.271 72.222 12.23 0.00 39.82 3.51
687 707 3.171388 GCCCCGTGATCCCATCCT 61.171 66.667 0.00 0.00 0.00 3.24
714 743 2.809174 GCGCCGCAAAATTCCCAC 60.809 61.111 3.15 0.00 0.00 4.61
964 1019 2.541588 GCGGCGAAAACCTAGATACGTA 60.542 50.000 12.98 0.00 0.00 3.57
965 1020 3.038710 CGGCGAAAACCTAGATACGTAC 58.961 50.000 0.00 0.00 0.00 3.67
973 1028 0.886490 CTAGATACGTACCCCGCCGT 60.886 60.000 0.00 0.00 41.42 5.68
974 1029 0.884704 TAGATACGTACCCCGCCGTC 60.885 60.000 0.00 0.00 41.42 4.79
975 1030 3.527360 GATACGTACCCCGCCGTCG 62.527 68.421 0.00 0.00 41.42 5.12
1267 1332 1.555741 GCTCCATCGCAGATTCGCTC 61.556 60.000 0.00 0.00 45.12 5.03
1268 1333 1.274126 CTCCATCGCAGATTCGCTCG 61.274 60.000 0.00 0.00 45.12 5.03
1304 1382 9.910511 GTTCTTATTTTTATTCGATCGCTGTAA 57.089 29.630 11.09 6.42 0.00 2.41
1348 1426 1.607801 GGTGAATTTGGGGCTGGAGC 61.608 60.000 0.00 0.00 41.14 4.70
1351 1429 1.657751 GAATTTGGGGCTGGAGCGAC 61.658 60.000 0.00 0.00 43.26 5.19
1413 1491 1.871676 GTGACCTTTCTCGTGTTTCCC 59.128 52.381 0.00 0.00 0.00 3.97
1444 1522 4.768968 AGTTGACTGAATTTTGATCCCAGG 59.231 41.667 0.00 0.00 0.00 4.45
1478 1570 7.540474 TCCAGTTCTTTCAAGTCACTACTAT 57.460 36.000 0.00 0.00 33.75 2.12
1479 1571 8.645814 TCCAGTTCTTTCAAGTCACTACTATA 57.354 34.615 0.00 0.00 33.75 1.31
1567 1662 6.439599 TCTGCGTCATTAGCTATTTCTAGAC 58.560 40.000 0.00 0.00 35.28 2.59
1618 1713 7.102346 TGGATTTTCTTTCTCTCTTGAGCTAG 58.898 38.462 0.00 0.00 40.03 3.42
1648 1743 1.602668 GCCTTCGAATTTGCTTGCACA 60.603 47.619 0.00 0.00 0.00 4.57
1697 1805 5.916661 AGTTCAGTTCGATAGTGGTGTAT 57.083 39.130 0.00 0.00 37.40 2.29
1698 1806 6.282199 AGTTCAGTTCGATAGTGGTGTATT 57.718 37.500 0.00 0.00 37.40 1.89
1699 1807 7.400599 AGTTCAGTTCGATAGTGGTGTATTA 57.599 36.000 0.00 0.00 37.40 0.98
1700 1808 7.256286 AGTTCAGTTCGATAGTGGTGTATTAC 58.744 38.462 0.00 0.00 37.40 1.89
1701 1809 6.762702 TCAGTTCGATAGTGGTGTATTACA 57.237 37.500 0.00 0.00 37.40 2.41
1702 1810 7.342769 TCAGTTCGATAGTGGTGTATTACAT 57.657 36.000 0.00 0.00 37.40 2.29
1765 1873 4.455877 GCTAGTTGATGTGGTAAAAGTGCT 59.544 41.667 0.00 0.00 0.00 4.40
1773 1881 4.638304 TGTGGTAAAAGTGCTACTTCCTC 58.362 43.478 2.65 2.82 37.47 3.71
1777 1885 6.932960 GTGGTAAAAGTGCTACTTCCTCTTTA 59.067 38.462 2.65 0.00 37.47 1.85
2051 2170 1.949525 CCAATAAGATGCAGGAACCGG 59.050 52.381 0.00 0.00 0.00 5.28
2352 2471 3.330701 ACAGGCTTGAAGATCCAACCTTA 59.669 43.478 1.40 0.00 30.59 2.69
2444 2563 1.002888 CCTTGATGCTCAGGTGAGTGT 59.997 52.381 8.74 0.00 43.85 3.55
2496 2664 5.900425 TGTGTGTGCATGTTAATTTGTTCT 58.100 33.333 0.00 0.00 0.00 3.01
2504 2672 7.007367 GTGCATGTTAATTTGTTCTGTATCACG 59.993 37.037 0.00 0.00 0.00 4.35
2638 2806 9.486497 AATCATGCTATCATATCGTTCATATCC 57.514 33.333 0.00 0.00 0.00 2.59
2803 2971 6.207417 TGAACCTTGATTTCTTAAGAAGCAGG 59.793 38.462 17.05 19.67 35.21 4.85
2956 3137 4.764823 TGTTTAATACTGGGGTTGCTCTTG 59.235 41.667 0.00 0.00 0.00 3.02
3064 3245 5.123227 GTTGCCTTTACTAGTGCATATGGA 58.877 41.667 5.39 0.00 32.49 3.41
3069 3251 5.641209 CCTTTACTAGTGCATATGGATCTGC 59.359 44.000 5.39 0.00 38.87 4.26
3088 3274 4.139786 CTGCTGCTTGGGAATATGTATGT 58.860 43.478 0.00 0.00 0.00 2.29
3089 3275 5.071653 TCTGCTGCTTGGGAATATGTATGTA 59.928 40.000 0.00 0.00 0.00 2.29
3090 3276 5.879763 TGCTGCTTGGGAATATGTATGTAT 58.120 37.500 0.00 0.00 0.00 2.29
3091 3277 5.706833 TGCTGCTTGGGAATATGTATGTATG 59.293 40.000 0.00 0.00 0.00 2.39
3092 3278 5.707298 GCTGCTTGGGAATATGTATGTATGT 59.293 40.000 0.00 0.00 0.00 2.29
3224 3410 4.025061 GCTTGCTTATGTATGAGTCTGCAG 60.025 45.833 7.63 7.63 0.00 4.41
3306 3534 8.087750 TCGGATGATATTTGCTTTTGAGTTTTT 58.912 29.630 0.00 0.00 0.00 1.94
3343 3571 6.260050 TGTGATCTTAACTGGTGTCTTTGTTC 59.740 38.462 0.00 0.00 0.00 3.18
3347 3575 9.220767 GATCTTAACTGGTGTCTTTGTTCTATT 57.779 33.333 0.00 0.00 0.00 1.73
3639 3867 7.331934 TGTTAGCTCTGTCACATATCTTGTTTC 59.668 37.037 0.00 0.00 36.00 2.78
3755 3983 5.106442 ACGAAATATCTACGTGCACATCAA 58.894 37.500 18.64 0.00 38.79 2.57
3843 4071 5.574055 GTGAATATCTTACGACGTGTTTGGA 59.426 40.000 11.56 2.01 0.00 3.53
3844 4072 6.089820 GTGAATATCTTACGACGTGTTTGGAA 59.910 38.462 11.56 0.00 0.00 3.53
3864 4092 2.976440 AGGGCTGAAAAATCCCACTTT 58.024 42.857 0.00 0.00 42.52 2.66
3900 4128 2.038033 AGGAAACAGTAGCAGCCGTTTA 59.962 45.455 0.00 0.00 31.98 2.01
3906 4134 1.271656 AGTAGCAGCCGTTTAGTTCGT 59.728 47.619 0.00 0.00 0.00 3.85
3967 4195 0.179012 ACATCCCCAAAAACGTCCGT 60.179 50.000 0.00 0.00 0.00 4.69
4012 4240 0.387112 TGTTCCGTATTCGTTCGCGT 60.387 50.000 5.77 0.00 42.11 6.01
4222 4450 3.679083 CGAATGTAGTCCTCCCTTGGTTC 60.679 52.174 0.00 0.00 0.00 3.62
4237 4465 9.640963 CTCCCTTGGTTCGAACTAAATATATAG 57.359 37.037 24.58 12.94 0.00 1.31
4358 4586 2.812613 GCCTTTGCTACAGGGTGTTACA 60.813 50.000 0.00 0.00 31.20 2.41
4532 4760 4.757149 CCTCACAGGTTAGAAAGAAGTTGG 59.243 45.833 0.00 0.00 0.00 3.77
4533 4761 5.454755 CCTCACAGGTTAGAAAGAAGTTGGA 60.455 44.000 0.00 0.00 0.00 3.53
4534 4762 5.365619 TCACAGGTTAGAAAGAAGTTGGAC 58.634 41.667 0.00 0.00 0.00 4.02
4648 4876 5.147330 TGCGATTTCCTTAGAAAGACAGA 57.853 39.130 0.00 0.00 44.96 3.41
4701 4932 3.528370 GCTAGGAGGGCGCGAGAA 61.528 66.667 12.10 0.00 0.00 2.87
4838 5130 3.765968 CCCCCATTAGGCCCATTAC 57.234 57.895 0.00 0.00 0.00 1.89
4850 5142 3.770933 AGGCCCATTACGTACTCTAACAA 59.229 43.478 0.00 0.00 0.00 2.83
4852 5144 4.748600 GGCCCATTACGTACTCTAACAATC 59.251 45.833 0.00 0.00 0.00 2.67
4853 5145 5.452917 GGCCCATTACGTACTCTAACAATCT 60.453 44.000 0.00 0.00 0.00 2.40
4854 5146 5.462398 GCCCATTACGTACTCTAACAATCTG 59.538 44.000 0.00 0.00 0.00 2.90
4934 5226 3.757745 ACGCCTTGAATATTTCCAACG 57.242 42.857 0.00 0.00 0.00 4.10
5428 5984 5.590104 ACACTTGTTTTGTGTTTGAAAGC 57.410 34.783 0.00 0.00 45.11 3.51
5479 6035 6.635755 AGTTGGCTATACAGAGAAAGAAGAC 58.364 40.000 0.00 0.00 0.00 3.01
5527 6083 3.381272 AGTGTGTGCATAGTTGTTGCTTT 59.619 39.130 0.00 0.00 40.77 3.51
5585 6141 7.246763 AGGAGTAACTAGCCAGCCTAATAATA 58.753 38.462 0.00 0.00 0.00 0.98
5597 6153 7.278868 GCCAGCCTAATAATATAGCAGTGTAAG 59.721 40.741 0.00 0.00 0.00 2.34
5615 6173 1.531748 GGATTCAATCCCAGGCCGA 59.468 57.895 4.89 0.00 43.88 5.54
5652 6225 4.699522 GGTGGGCGCTCGTTCCTT 62.700 66.667 7.64 0.00 0.00 3.36
5660 6233 1.290203 CGCTCGTTCCTTGTGCATAT 58.710 50.000 0.00 0.00 0.00 1.78
5688 6261 3.490439 TGAGCTGTGTTTCCTCATTCA 57.510 42.857 0.00 0.00 31.16 2.57
5689 6262 4.025040 TGAGCTGTGTTTCCTCATTCAT 57.975 40.909 0.00 0.00 31.16 2.57
5692 6265 5.302568 TGAGCTGTGTTTCCTCATTCATTTT 59.697 36.000 0.00 0.00 31.16 1.82
5765 6399 4.225267 AGTTTTCCAGACGGTAGATCCAAT 59.775 41.667 0.00 0.00 35.57 3.16
5774 6408 4.028131 ACGGTAGATCCAATGGTGAGTTA 58.972 43.478 0.00 0.00 35.57 2.24
5776 6410 4.704965 GGTAGATCCAATGGTGAGTTACC 58.295 47.826 0.00 0.00 42.15 2.85
5778 6412 6.905776 GGTAGATCCAATGGTGAGTTACCGA 61.906 48.000 0.00 0.00 43.57 4.69
5779 6413 8.144145 GGTAGATCCAATGGTGAGTTACCGAT 62.144 46.154 0.00 0.00 43.57 4.18
5941 6604 1.229428 CTGGATATTTGGCGACGCAT 58.771 50.000 23.09 9.30 0.00 4.73
6122 6792 8.335484 AGATATAATCTGTAGAGATCTCCAGCA 58.665 37.037 19.30 13.82 38.03 4.41
6156 6826 0.738762 CCTCAGATCAGTGCGTGTGG 60.739 60.000 0.00 0.00 0.00 4.17
6227 6897 0.177141 TAGTTATGCGTGGCCTGGTC 59.823 55.000 3.32 0.00 0.00 4.02
6271 6941 1.847818 TGCGATATGTTGGCGTACTC 58.152 50.000 0.00 0.00 0.00 2.59
6272 6942 0.776451 GCGATATGTTGGCGTACTCG 59.224 55.000 0.00 0.00 40.37 4.18
6273 6943 1.405461 CGATATGTTGGCGTACTCGG 58.595 55.000 0.00 0.00 37.56 4.63
6274 6944 1.779569 GATATGTTGGCGTACTCGGG 58.220 55.000 0.00 0.00 37.56 5.14
6275 6945 0.249741 ATATGTTGGCGTACTCGGGC 60.250 55.000 0.00 0.00 37.56 6.13
6280 6950 2.832201 GGCGTACTCGGGCCTAGT 60.832 66.667 15.68 15.68 45.93 2.57
6281 6951 2.421399 GGCGTACTCGGGCCTAGTT 61.421 63.158 16.61 0.94 45.93 2.24
6282 6952 1.065436 GCGTACTCGGGCCTAGTTC 59.935 63.158 16.61 10.30 37.56 3.01
6283 6953 1.382692 GCGTACTCGGGCCTAGTTCT 61.383 60.000 16.61 0.00 37.56 3.01
6284 6954 1.101331 CGTACTCGGGCCTAGTTCTT 58.899 55.000 16.61 0.00 0.00 2.52
6285 6955 1.475682 CGTACTCGGGCCTAGTTCTTT 59.524 52.381 16.61 0.00 0.00 2.52
6286 6956 2.479219 CGTACTCGGGCCTAGTTCTTTC 60.479 54.545 16.61 2.30 0.00 2.62
6287 6957 0.531200 ACTCGGGCCTAGTTCTTTCG 59.469 55.000 4.61 0.00 0.00 3.46
6288 6958 0.179108 CTCGGGCCTAGTTCTTTCGG 60.179 60.000 0.84 0.00 0.00 4.30
6289 6959 1.814169 CGGGCCTAGTTCTTTCGGC 60.814 63.158 0.84 0.00 41.75 5.54
6291 6961 3.795638 GCCTAGTTCTTTCGGCCG 58.204 61.111 22.12 22.12 36.56 6.13
6292 6962 1.217244 GCCTAGTTCTTTCGGCCGA 59.783 57.895 27.28 27.28 36.56 5.54
6293 6963 0.179081 GCCTAGTTCTTTCGGCCGAT 60.179 55.000 31.56 15.91 36.56 4.18
6294 6964 1.742750 GCCTAGTTCTTTCGGCCGATT 60.743 52.381 31.56 12.78 36.56 3.34
6295 6965 2.202566 CCTAGTTCTTTCGGCCGATTC 58.797 52.381 31.56 16.80 0.00 2.52
6296 6966 2.159085 CCTAGTTCTTTCGGCCGATTCT 60.159 50.000 31.56 22.38 0.00 2.40
6297 6967 2.011540 AGTTCTTTCGGCCGATTCTC 57.988 50.000 31.56 17.87 0.00 2.87
6298 6968 1.007580 GTTCTTTCGGCCGATTCTCC 58.992 55.000 31.56 13.66 0.00 3.71
6299 6969 0.902531 TTCTTTCGGCCGATTCTCCT 59.097 50.000 31.56 0.00 0.00 3.69
6300 6970 1.771565 TCTTTCGGCCGATTCTCCTA 58.228 50.000 31.56 9.43 0.00 2.94
6301 6971 1.681793 TCTTTCGGCCGATTCTCCTAG 59.318 52.381 31.56 16.43 0.00 3.02
6302 6972 1.681793 CTTTCGGCCGATTCTCCTAGA 59.318 52.381 31.56 7.62 0.00 2.43
6317 6987 5.696030 TCTCCTAGAATCTTGAGAATCGGA 58.304 41.667 8.99 0.00 38.61 4.55
6318 6988 5.533154 TCTCCTAGAATCTTGAGAATCGGAC 59.467 44.000 8.99 0.00 38.61 4.79
6324 6994 1.007238 TCTTGAGAATCGGACCTCCCT 59.993 52.381 6.74 0.00 38.61 4.20
6325 6995 1.834263 CTTGAGAATCGGACCTCCCTT 59.166 52.381 6.74 0.00 38.61 3.95
6326 6996 2.840640 TGAGAATCGGACCTCCCTTA 57.159 50.000 6.74 0.00 38.61 2.69
6328 6998 1.341852 GAGAATCGGACCTCCCTTAGC 59.658 57.143 0.00 0.00 0.00 3.09
6329 6999 1.062810 AGAATCGGACCTCCCTTAGCT 60.063 52.381 0.00 0.00 0.00 3.32
6330 7000 1.763545 GAATCGGACCTCCCTTAGCTT 59.236 52.381 0.00 0.00 0.00 3.74
6332 7002 0.335361 TCGGACCTCCCTTAGCTTCT 59.665 55.000 0.00 0.00 0.00 2.85
6333 7003 1.196012 CGGACCTCCCTTAGCTTCTT 58.804 55.000 0.00 0.00 0.00 2.52
6334 7004 1.137282 CGGACCTCCCTTAGCTTCTTC 59.863 57.143 0.00 0.00 0.00 2.87
6335 7005 2.473070 GGACCTCCCTTAGCTTCTTCT 58.527 52.381 0.00 0.00 0.00 2.85
6336 7006 3.644335 GGACCTCCCTTAGCTTCTTCTA 58.356 50.000 0.00 0.00 0.00 2.10
6337 7007 3.639561 GGACCTCCCTTAGCTTCTTCTAG 59.360 52.174 0.00 0.00 0.00 2.43
6338 7008 4.538738 GACCTCCCTTAGCTTCTTCTAGA 58.461 47.826 0.00 0.00 0.00 2.43
6339 7009 4.949121 ACCTCCCTTAGCTTCTTCTAGAA 58.051 43.478 4.81 4.81 32.50 2.10
6340 7010 5.534070 ACCTCCCTTAGCTTCTTCTAGAAT 58.466 41.667 5.44 0.00 33.13 2.40
6341 7011 5.600898 ACCTCCCTTAGCTTCTTCTAGAATC 59.399 44.000 5.44 0.00 33.13 2.52
6342 7012 5.838521 CCTCCCTTAGCTTCTTCTAGAATCT 59.161 44.000 5.44 4.13 35.21 2.40
6343 7013 6.326323 CCTCCCTTAGCTTCTTCTAGAATCTT 59.674 42.308 5.44 0.00 33.31 2.40
6345 7015 6.897966 TCCCTTAGCTTCTTCTAGAATCTTGA 59.102 38.462 5.44 0.00 33.31 3.02
6346 7016 7.400339 TCCCTTAGCTTCTTCTAGAATCTTGAA 59.600 37.037 5.44 6.93 33.31 2.69
6347 7017 8.210265 CCCTTAGCTTCTTCTAGAATCTTGAAT 58.790 37.037 5.44 0.00 33.31 2.57
6348 7018 9.612066 CCTTAGCTTCTTCTAGAATCTTGAATT 57.388 33.333 5.44 1.28 33.31 2.17
6390 7060 8.660295 TCCTAGATAGTTCAAAACAACTAGGA 57.340 34.615 21.43 21.43 45.58 2.94
6391 7061 9.268282 TCCTAGATAGTTCAAAACAACTAGGAT 57.732 33.333 21.43 5.03 44.50 3.24
6392 7062 9.892130 CCTAGATAGTTCAAAACAACTAGGATT 57.108 33.333 19.85 0.00 44.14 3.01
6395 7065 9.220767 AGATAGTTCAAAACAACTAGGATTGTC 57.779 33.333 0.00 0.00 42.01 3.18
6396 7066 8.918202 ATAGTTCAAAACAACTAGGATTGTCA 57.082 30.769 0.00 0.00 42.01 3.58
6397 7067 7.639113 AGTTCAAAACAACTAGGATTGTCAA 57.361 32.000 0.00 0.00 42.01 3.18
6398 7068 8.062065 AGTTCAAAACAACTAGGATTGTCAAA 57.938 30.769 0.00 0.00 42.01 2.69
6400 7070 9.313118 GTTCAAAACAACTAGGATTGTCAAAAT 57.687 29.630 0.00 0.00 42.01 1.82
6427 7097 9.504708 AATATGCATTCAAGATTCTAGGAGAAG 57.495 33.333 3.54 0.00 37.69 2.85
6428 7098 5.121811 TGCATTCAAGATTCTAGGAGAAGC 58.878 41.667 0.00 0.00 40.68 3.86
6436 7106 0.710588 TCTAGGAGAAGCTGGGTGGA 59.289 55.000 0.00 0.00 0.00 4.02
6440 7110 1.492993 GGAGAAGCTGGGTGGAGGTT 61.493 60.000 0.00 0.00 36.38 3.50
6441 7111 0.402121 GAGAAGCTGGGTGGAGGTTT 59.598 55.000 0.00 0.00 33.83 3.27
6442 7112 0.111253 AGAAGCTGGGTGGAGGTTTG 59.889 55.000 0.00 0.00 33.83 2.93
6443 7113 0.110486 GAAGCTGGGTGGAGGTTTGA 59.890 55.000 0.00 0.00 33.83 2.69
6444 7114 0.779997 AAGCTGGGTGGAGGTTTGAT 59.220 50.000 0.00 0.00 29.23 2.57
6445 7115 0.779997 AGCTGGGTGGAGGTTTGATT 59.220 50.000 0.00 0.00 0.00 2.57
6446 7116 1.177401 GCTGGGTGGAGGTTTGATTC 58.823 55.000 0.00 0.00 0.00 2.52
6447 7117 1.272147 GCTGGGTGGAGGTTTGATTCT 60.272 52.381 0.00 0.00 0.00 2.40
6448 7118 2.716217 CTGGGTGGAGGTTTGATTCTC 58.284 52.381 0.00 0.00 0.00 2.87
6449 7119 2.040278 CTGGGTGGAGGTTTGATTCTCA 59.960 50.000 0.00 0.00 0.00 3.27
6450 7120 2.649312 TGGGTGGAGGTTTGATTCTCAT 59.351 45.455 0.00 0.00 0.00 2.90
6451 7121 3.019564 GGGTGGAGGTTTGATTCTCATG 58.980 50.000 0.00 0.00 0.00 3.07
6452 7122 3.308402 GGGTGGAGGTTTGATTCTCATGA 60.308 47.826 0.00 0.00 0.00 3.07
6453 7123 3.691609 GGTGGAGGTTTGATTCTCATGAC 59.308 47.826 0.00 0.00 0.00 3.06
6454 7124 4.566488 GGTGGAGGTTTGATTCTCATGACT 60.566 45.833 0.00 0.00 0.00 3.41
6455 7125 5.338381 GGTGGAGGTTTGATTCTCATGACTA 60.338 44.000 0.00 0.00 0.00 2.59
6456 7126 6.352516 GTGGAGGTTTGATTCTCATGACTAT 58.647 40.000 0.00 0.00 0.00 2.12
6458 7128 5.762218 GGAGGTTTGATTCTCATGACTATGG 59.238 44.000 0.00 0.00 34.97 2.74
6459 7129 5.688807 AGGTTTGATTCTCATGACTATGGG 58.311 41.667 0.00 0.00 36.04 4.00
6460 7130 5.429762 AGGTTTGATTCTCATGACTATGGGA 59.570 40.000 0.00 0.00 42.01 4.37
6461 7131 5.762218 GGTTTGATTCTCATGACTATGGGAG 59.238 44.000 0.00 0.00 44.32 4.30
6463 7133 7.222872 GTTTGATTCTCATGACTATGGGAGAT 58.777 38.462 0.00 0.00 44.32 2.75
6464 7134 7.384524 TTGATTCTCATGACTATGGGAGATT 57.615 36.000 0.00 0.00 44.32 2.40
6465 7135 7.002250 TGATTCTCATGACTATGGGAGATTC 57.998 40.000 0.00 0.00 44.32 2.52
6467 7137 3.829026 TCTCATGACTATGGGAGATTCGG 59.171 47.826 0.00 0.00 38.87 4.30
6469 7139 3.574396 TCATGACTATGGGAGATTCGGTC 59.426 47.826 0.00 0.00 34.97 4.79
6470 7140 3.026707 TGACTATGGGAGATTCGGTCA 57.973 47.619 0.00 0.00 0.00 4.02
6471 7141 3.371034 TGACTATGGGAGATTCGGTCAA 58.629 45.455 0.00 0.00 30.81 3.18
6472 7142 3.772572 TGACTATGGGAGATTCGGTCAAA 59.227 43.478 0.00 0.00 30.81 2.69
6473 7143 4.224147 TGACTATGGGAGATTCGGTCAAAA 59.776 41.667 0.00 0.00 30.81 2.44
6474 7144 4.770795 ACTATGGGAGATTCGGTCAAAAG 58.229 43.478 0.00 0.00 0.00 2.27
6475 7145 4.469945 ACTATGGGAGATTCGGTCAAAAGA 59.530 41.667 0.00 0.00 0.00 2.52
6476 7146 3.780804 TGGGAGATTCGGTCAAAAGAA 57.219 42.857 0.00 0.00 0.00 2.52
6477 7147 3.408634 TGGGAGATTCGGTCAAAAGAAC 58.591 45.455 0.00 0.00 0.00 3.01
6478 7148 3.072476 TGGGAGATTCGGTCAAAAGAACT 59.928 43.478 0.00 0.00 0.00 3.01
6479 7149 3.437049 GGGAGATTCGGTCAAAAGAACTG 59.563 47.826 0.00 0.00 0.00 3.16
6480 7150 3.437049 GGAGATTCGGTCAAAAGAACTGG 59.563 47.826 0.00 0.00 0.00 4.00
6481 7151 3.412386 AGATTCGGTCAAAAGAACTGGG 58.588 45.455 0.00 0.00 0.00 4.45
6482 7152 1.314730 TTCGGTCAAAAGAACTGGGC 58.685 50.000 0.00 0.00 0.00 5.36
6483 7153 0.536460 TCGGTCAAAAGAACTGGGCC 60.536 55.000 0.00 0.00 0.00 5.80
6484 7154 0.537371 CGGTCAAAAGAACTGGGCCT 60.537 55.000 4.53 0.00 0.00 5.19
6485 7155 1.704641 GGTCAAAAGAACTGGGCCTT 58.295 50.000 4.53 0.00 0.00 4.35
6486 7156 1.341209 GGTCAAAAGAACTGGGCCTTG 59.659 52.381 4.53 0.00 0.00 3.61
6499 7169 0.552848 GGCCTTGATCAGATCCCCAA 59.447 55.000 8.00 0.00 0.00 4.12
6511 7818 1.005450 GATCCCCAAGTAAACAGGCCA 59.995 52.381 5.01 0.00 0.00 5.36
6547 7855 0.404040 TTCCTGGAACGGAGGCAAAT 59.596 50.000 4.68 0.00 36.31 2.32
6549 7857 1.203001 TCCTGGAACGGAGGCAAATTT 60.203 47.619 0.00 0.00 36.31 1.82
6580 7890 8.035394 TCTCGTTGATTAAGCAGAAGATAGTTT 58.965 33.333 0.00 0.00 0.00 2.66
6609 7919 7.812191 CGGTTAATTGATGAAAAACTGGATGAA 59.188 33.333 0.00 0.00 0.00 2.57
6620 8061 8.912988 TGAAAAACTGGATGAAAACTCTTACAT 58.087 29.630 0.00 0.00 0.00 2.29
6664 8105 5.765510 TCACAAAGTATAAAGCCCCATGAT 58.234 37.500 0.00 0.00 0.00 2.45
6672 8113 2.629017 AAGCCCCATGATTGAAAGGT 57.371 45.000 0.00 0.00 0.00 3.50
6673 8114 2.629017 AGCCCCATGATTGAAAGGTT 57.371 45.000 0.00 0.00 0.00 3.50
6674 8115 3.756082 AGCCCCATGATTGAAAGGTTA 57.244 42.857 0.00 0.00 0.00 2.85
6675 8116 3.635591 AGCCCCATGATTGAAAGGTTAG 58.364 45.455 0.00 0.00 0.00 2.34
6676 8117 3.011708 AGCCCCATGATTGAAAGGTTAGT 59.988 43.478 0.00 0.00 0.00 2.24
6677 8118 3.381590 GCCCCATGATTGAAAGGTTAGTC 59.618 47.826 0.00 0.00 0.00 2.59
6678 8119 4.860022 CCCCATGATTGAAAGGTTAGTCT 58.140 43.478 0.00 0.00 0.00 3.24
6679 8120 4.641989 CCCCATGATTGAAAGGTTAGTCTG 59.358 45.833 0.00 0.00 0.00 3.51
6680 8121 5.500234 CCCATGATTGAAAGGTTAGTCTGA 58.500 41.667 0.00 0.00 0.00 3.27
6681 8122 5.355350 CCCATGATTGAAAGGTTAGTCTGAC 59.645 44.000 0.00 0.00 0.00 3.51
6695 8136 6.260050 GGTTAGTCTGACAAACATTCTCAACA 59.740 38.462 10.88 0.00 0.00 3.33
6697 8138 4.576463 AGTCTGACAAACATTCTCAACACC 59.424 41.667 10.88 0.00 0.00 4.16
6733 8174 0.606673 GCCTCCACACTTGTTCTCCC 60.607 60.000 0.00 0.00 0.00 4.30
6740 8181 1.070289 ACACTTGTTCTCCCTCCGTTC 59.930 52.381 0.00 0.00 0.00 3.95
6741 8182 0.685660 ACTTGTTCTCCCTCCGTTCC 59.314 55.000 0.00 0.00 0.00 3.62
6750 8191 6.612456 TGTTCTCCCTCCGTTCCTAAATATAA 59.388 38.462 0.00 0.00 0.00 0.98
6751 8192 6.912951 TCTCCCTCCGTTCCTAAATATAAG 57.087 41.667 0.00 0.00 0.00 1.73
6752 8193 5.245526 TCTCCCTCCGTTCCTAAATATAAGC 59.754 44.000 0.00 0.00 0.00 3.09
6753 8194 4.285260 TCCCTCCGTTCCTAAATATAAGCC 59.715 45.833 0.00 0.00 0.00 4.35
6754 8195 4.286291 CCCTCCGTTCCTAAATATAAGCCT 59.714 45.833 0.00 0.00 0.00 4.58
6755 8196 5.482878 CCCTCCGTTCCTAAATATAAGCCTA 59.517 44.000 0.00 0.00 0.00 3.93
6756 8197 6.013984 CCCTCCGTTCCTAAATATAAGCCTAA 60.014 42.308 0.00 0.00 0.00 2.69
6760 8203 9.856162 TCCGTTCCTAAATATAAGCCTAAAAAT 57.144 29.630 0.00 0.00 0.00 1.82
6798 8241 7.334090 ACTACATACAGAGCAAAATGAGTGAT 58.666 34.615 0.00 0.00 0.00 3.06
6799 8242 7.826252 ACTACATACAGAGCAAAATGAGTGATT 59.174 33.333 0.00 0.00 0.00 2.57
6800 8243 9.317936 CTACATACAGAGCAAAATGAGTGATTA 57.682 33.333 0.00 0.00 0.00 1.75
6801 8244 8.565896 ACATACAGAGCAAAATGAGTGATTAA 57.434 30.769 0.00 0.00 0.00 1.40
6802 8245 9.013229 ACATACAGAGCAAAATGAGTGATTAAA 57.987 29.630 0.00 0.00 0.00 1.52
6803 8246 9.844790 CATACAGAGCAAAATGAGTGATTAAAA 57.155 29.630 0.00 0.00 0.00 1.52
6838 8281 4.766007 CATCTGTATGCAGTTTGTATCGC 58.234 43.478 10.80 0.00 43.05 4.58
6839 8282 3.855858 TCTGTATGCAGTTTGTATCGCA 58.144 40.909 10.80 0.00 43.05 5.10
6840 8283 4.249661 TCTGTATGCAGTTTGTATCGCAA 58.750 39.130 10.80 0.00 43.05 4.85
6841 8284 4.875536 TCTGTATGCAGTTTGTATCGCAAT 59.124 37.500 10.80 0.00 43.05 3.56
6842 8285 6.045955 TCTGTATGCAGTTTGTATCGCAATA 58.954 36.000 10.80 0.00 43.05 1.90
6843 8286 6.705825 TCTGTATGCAGTTTGTATCGCAATAT 59.294 34.615 10.80 0.00 43.05 1.28
6844 8287 6.887368 TGTATGCAGTTTGTATCGCAATATC 58.113 36.000 0.00 0.00 38.01 1.63
6845 8288 6.705825 TGTATGCAGTTTGTATCGCAATATCT 59.294 34.615 0.00 0.00 38.01 1.98
6846 8289 7.870445 TGTATGCAGTTTGTATCGCAATATCTA 59.130 33.333 0.00 0.00 38.01 1.98
6847 8290 7.728847 ATGCAGTTTGTATCGCAATATCTAA 57.271 32.000 0.00 0.00 38.01 2.10
6848 8291 7.546778 TGCAGTTTGTATCGCAATATCTAAA 57.453 32.000 0.00 0.00 36.89 1.85
6849 8292 7.980062 TGCAGTTTGTATCGCAATATCTAAAA 58.020 30.769 0.00 0.00 36.89 1.52
6850 8293 8.454894 TGCAGTTTGTATCGCAATATCTAAAAA 58.545 29.630 0.00 0.00 36.89 1.94
6851 8294 8.947940 GCAGTTTGTATCGCAATATCTAAAAAG 58.052 33.333 0.00 0.00 36.89 2.27
6852 8295 9.438291 CAGTTTGTATCGCAATATCTAAAAAGG 57.562 33.333 0.00 0.00 36.89 3.11
6853 8296 8.129211 AGTTTGTATCGCAATATCTAAAAAGGC 58.871 33.333 0.00 0.00 36.89 4.35
6854 8297 7.801716 TTGTATCGCAATATCTAAAAAGGCT 57.198 32.000 0.00 0.00 31.07 4.58
6855 8298 7.801716 TGTATCGCAATATCTAAAAAGGCTT 57.198 32.000 0.00 0.00 0.00 4.35
6856 8299 8.896320 TGTATCGCAATATCTAAAAAGGCTTA 57.104 30.769 0.00 0.00 0.00 3.09
6857 8300 9.502091 TGTATCGCAATATCTAAAAAGGCTTAT 57.498 29.630 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 4.500116 GAGACGAGGCGGACTGGC 62.500 72.222 0.00 0.00 45.27 4.85
16 17 4.180946 CGAGACGAGGCGGACTGG 62.181 72.222 0.00 0.00 0.00 4.00
17 18 1.437772 ATACGAGACGAGGCGGACTG 61.438 60.000 0.00 0.00 0.00 3.51
18 19 1.153208 ATACGAGACGAGGCGGACT 60.153 57.895 0.00 0.00 0.00 3.85
19 20 1.009900 CATACGAGACGAGGCGGAC 60.010 63.158 0.00 0.00 0.00 4.79
39 40 7.859325 TCTTATTCCATCTTTAGAAAACGGG 57.141 36.000 0.00 0.00 0.00 5.28
40 41 9.722056 CAATCTTATTCCATCTTTAGAAAACGG 57.278 33.333 0.00 0.00 0.00 4.44
42 43 9.521503 GGCAATCTTATTCCATCTTTAGAAAAC 57.478 33.333 0.00 0.00 0.00 2.43
49 50 4.823989 CGAGGGCAATCTTATTCCATCTTT 59.176 41.667 0.00 0.00 0.00 2.52
56 57 1.239347 GGGCGAGGGCAATCTTATTC 58.761 55.000 0.00 0.00 42.47 1.75
83 84 3.718210 CTAGAAGCACCGCCGGGAC 62.718 68.421 8.57 0.00 36.97 4.46
108 109 4.421479 AGCTCCGCACGTCTTCCG 62.421 66.667 0.00 0.00 44.03 4.30
112 113 3.559657 GACACAGCTCCGCACGTCT 62.560 63.158 0.00 0.00 0.00 4.18
121 122 1.954362 ATCCGCCAGAGACACAGCTC 61.954 60.000 0.00 0.00 35.11 4.09
124 125 0.102120 GAGATCCGCCAGAGACACAG 59.898 60.000 0.00 0.00 0.00 3.66
133 134 4.259952 ATCTCACGAGATCCGCCA 57.740 55.556 3.64 0.00 44.37 5.69
152 153 1.952133 CGAAGACAAACGCCGACCA 60.952 57.895 0.00 0.00 0.00 4.02
159 160 1.076332 GGATCCACCGAAGACAAACG 58.924 55.000 6.95 0.00 0.00 3.60
193 194 4.806330 ACACACTTACGTAGGTGAATGAG 58.194 43.478 35.70 22.77 36.84 2.90
206 207 0.865769 CAACCCGCAGACACACTTAC 59.134 55.000 0.00 0.00 0.00 2.34
233 234 2.448926 TGAAGAAAAGCGTGGATCGA 57.551 45.000 0.00 0.00 42.86 3.59
239 240 2.574322 CCGTCAATGAAGAAAAGCGTG 58.426 47.619 0.00 0.00 0.00 5.34
243 244 1.729149 GCCGCCGTCAATGAAGAAAAG 60.729 52.381 0.00 0.00 0.00 2.27
245 246 0.605319 AGCCGCCGTCAATGAAGAAA 60.605 50.000 0.00 0.00 0.00 2.52
246 247 1.003839 AGCCGCCGTCAATGAAGAA 60.004 52.632 0.00 0.00 0.00 2.52
254 255 2.970324 GAACAACAGCCGCCGTCA 60.970 61.111 0.00 0.00 0.00 4.35
255 256 2.665185 AGAACAACAGCCGCCGTC 60.665 61.111 0.00 0.00 0.00 4.79
256 257 2.972505 CAGAACAACAGCCGCCGT 60.973 61.111 0.00 0.00 0.00 5.68
263 264 0.588252 CCAAGGCGTCAGAACAACAG 59.412 55.000 0.00 0.00 0.00 3.16
274 275 0.243095 GACTCGTAAGACCAAGGCGT 59.757 55.000 0.00 0.00 45.01 5.68
275 276 0.242825 TGACTCGTAAGACCAAGGCG 59.757 55.000 0.00 0.00 45.01 5.52
277 278 4.113354 GCTAATGACTCGTAAGACCAAGG 58.887 47.826 0.00 0.00 45.01 3.61
278 279 4.744570 TGCTAATGACTCGTAAGACCAAG 58.255 43.478 0.00 0.00 45.01 3.61
279 280 4.794278 TGCTAATGACTCGTAAGACCAA 57.206 40.909 0.00 0.00 45.01 3.67
292 293 6.091305 CAGTCGAAAAGTCATCTTGCTAATGA 59.909 38.462 0.00 0.00 33.79 2.57
294 295 5.934625 ACAGTCGAAAAGTCATCTTGCTAAT 59.065 36.000 0.00 0.00 33.79 1.73
295 296 5.297547 ACAGTCGAAAAGTCATCTTGCTAA 58.702 37.500 0.00 0.00 33.79 3.09
296 297 4.883083 ACAGTCGAAAAGTCATCTTGCTA 58.117 39.130 0.00 0.00 33.79 3.49
297 298 3.733337 ACAGTCGAAAAGTCATCTTGCT 58.267 40.909 0.00 0.00 33.79 3.91
298 299 3.743396 AGACAGTCGAAAAGTCATCTTGC 59.257 43.478 13.49 0.00 34.80 4.01
299 300 6.088749 CAGTAGACAGTCGAAAAGTCATCTTG 59.911 42.308 13.49 5.03 34.80 3.02
300 301 6.153067 CAGTAGACAGTCGAAAAGTCATCTT 58.847 40.000 13.49 0.00 34.80 2.40
301 302 5.704888 CAGTAGACAGTCGAAAAGTCATCT 58.295 41.667 13.49 8.95 34.80 2.90
302 303 4.324936 GCAGTAGACAGTCGAAAAGTCATC 59.675 45.833 13.49 7.35 34.80 2.92
303 304 4.238514 GCAGTAGACAGTCGAAAAGTCAT 58.761 43.478 13.49 4.20 34.80 3.06
304 305 3.067601 TGCAGTAGACAGTCGAAAAGTCA 59.932 43.478 13.49 0.71 34.80 3.41
305 306 3.639538 TGCAGTAGACAGTCGAAAAGTC 58.360 45.455 5.32 5.32 0.00 3.01
306 307 3.728076 TGCAGTAGACAGTCGAAAAGT 57.272 42.857 0.00 0.00 0.00 2.66
307 308 3.802139 TGTTGCAGTAGACAGTCGAAAAG 59.198 43.478 0.00 0.00 0.00 2.27
308 309 3.787785 TGTTGCAGTAGACAGTCGAAAA 58.212 40.909 0.00 0.00 0.00 2.29
309 310 3.446310 TGTTGCAGTAGACAGTCGAAA 57.554 42.857 0.00 0.00 0.00 3.46
310 311 3.446310 TTGTTGCAGTAGACAGTCGAA 57.554 42.857 0.00 0.00 0.00 3.71
311 312 3.660501 ATTGTTGCAGTAGACAGTCGA 57.339 42.857 0.00 0.00 0.00 4.20
312 313 4.024893 ACAAATTGTTGCAGTAGACAGTCG 60.025 41.667 0.00 0.00 38.39 4.18
313 314 5.424121 ACAAATTGTTGCAGTAGACAGTC 57.576 39.130 0.00 0.00 38.39 3.51
314 315 5.221048 GGAACAAATTGTTGCAGTAGACAGT 60.221 40.000 22.40 0.00 46.14 3.55
315 316 5.215160 GGAACAAATTGTTGCAGTAGACAG 58.785 41.667 22.40 0.00 46.14 3.51
316 317 5.181690 GGAACAAATTGTTGCAGTAGACA 57.818 39.130 22.40 0.00 46.14 3.41
324 325 0.033366 AGCCGGGAACAAATTGTTGC 59.967 50.000 19.86 19.86 46.14 4.17
332 333 0.250234 CTCATCAGAGCCGGGAACAA 59.750 55.000 2.18 0.00 34.61 2.83
334 335 1.144936 CCTCATCAGAGCCGGGAAC 59.855 63.158 2.18 0.00 40.68 3.62
336 337 2.444706 CCCTCATCAGAGCCGGGA 60.445 66.667 2.18 0.00 40.68 5.14
375 376 0.317687 GTACTACGGCGAGCCTAAGC 60.318 60.000 16.62 0.00 40.32 3.09
379 380 0.964358 ACAAGTACTACGGCGAGCCT 60.964 55.000 16.62 3.77 0.00 4.58
380 381 0.734889 TACAAGTACTACGGCGAGCC 59.265 55.000 16.62 3.59 0.00 4.70
381 382 1.399791 ACTACAAGTACTACGGCGAGC 59.600 52.381 16.62 0.00 0.00 5.03
382 383 2.285486 CGACTACAAGTACTACGGCGAG 60.285 54.545 16.62 9.48 0.00 5.03
384 385 1.394917 ACGACTACAAGTACTACGGCG 59.605 52.381 4.80 4.80 0.00 6.46
385 386 2.675348 AGACGACTACAAGTACTACGGC 59.325 50.000 0.00 0.00 0.00 5.68
386 387 3.063180 CCAGACGACTACAAGTACTACGG 59.937 52.174 0.00 0.00 0.00 4.02
393 394 5.916661 ATTACATCCAGACGACTACAAGT 57.083 39.130 0.00 0.00 0.00 3.16
394 395 7.596749 AAAATTACATCCAGACGACTACAAG 57.403 36.000 0.00 0.00 0.00 3.16
395 396 7.972832 AAAAATTACATCCAGACGACTACAA 57.027 32.000 0.00 0.00 0.00 2.41
396 397 8.308931 AGTAAAAATTACATCCAGACGACTACA 58.691 33.333 0.00 0.00 0.00 2.74
398 399 7.977853 GGAGTAAAAATTACATCCAGACGACTA 59.022 37.037 0.00 0.00 0.00 2.59
399 400 6.817140 GGAGTAAAAATTACATCCAGACGACT 59.183 38.462 0.00 0.00 0.00 4.18
400 401 6.817140 AGGAGTAAAAATTACATCCAGACGAC 59.183 38.462 15.05 0.00 0.00 4.34
401 402 6.816640 CAGGAGTAAAAATTACATCCAGACGA 59.183 38.462 15.05 0.00 0.00 4.20
402 403 6.816640 TCAGGAGTAAAAATTACATCCAGACG 59.183 38.462 15.05 0.00 0.00 4.18
403 404 8.616076 CATCAGGAGTAAAAATTACATCCAGAC 58.384 37.037 15.05 0.00 0.00 3.51
404 405 8.328758 ACATCAGGAGTAAAAATTACATCCAGA 58.671 33.333 15.05 13.47 0.00 3.86
425 426 7.524717 TCGATCTATCCATCAACTAACATCA 57.475 36.000 0.00 0.00 0.00 3.07
427 428 8.424918 ACTTTCGATCTATCCATCAACTAACAT 58.575 33.333 0.00 0.00 0.00 2.71
433 434 7.539712 TCAAACTTTCGATCTATCCATCAAC 57.460 36.000 0.00 0.00 0.00 3.18
438 439 9.884636 TCTATTTTCAAACTTTCGATCTATCCA 57.115 29.630 0.00 0.00 0.00 3.41
451 465 8.360390 GGAGGTGTTTCATTCTATTTTCAAACT 58.640 33.333 0.00 0.00 0.00 2.66
452 466 8.141268 TGGAGGTGTTTCATTCTATTTTCAAAC 58.859 33.333 0.00 0.00 0.00 2.93
478 492 2.899838 TGCCGTTGCAGCTCGTTT 60.900 55.556 0.00 0.00 44.23 3.60
499 519 3.898509 CTCTCCTGCTCGGCTCGG 61.899 72.222 0.00 0.00 0.00 4.63
500 520 2.826287 TCTCTCCTGCTCGGCTCG 60.826 66.667 0.00 0.00 0.00 5.03
501 521 2.489275 CCTCTCTCCTGCTCGGCTC 61.489 68.421 0.00 0.00 0.00 4.70
502 522 2.441901 CCTCTCTCCTGCTCGGCT 60.442 66.667 0.00 0.00 0.00 5.52
503 523 4.219999 GCCTCTCTCCTGCTCGGC 62.220 72.222 0.00 0.00 0.00 5.54
538 558 3.656045 GAACGGTGGCGTTGTGGG 61.656 66.667 0.00 0.00 31.71 4.61
539 559 2.590575 AGAACGGTGGCGTTGTGG 60.591 61.111 0.00 0.00 31.71 4.17
540 560 2.631428 CAGAACGGTGGCGTTGTG 59.369 61.111 0.00 0.00 36.94 3.33
541 561 2.372040 TAGCAGAACGGTGGCGTTGT 62.372 55.000 0.00 0.00 31.71 3.32
542 562 1.019278 ATAGCAGAACGGTGGCGTTG 61.019 55.000 0.00 0.00 31.71 4.10
543 563 0.321298 AATAGCAGAACGGTGGCGTT 60.321 50.000 0.00 0.00 34.52 4.84
544 564 0.321298 AAATAGCAGAACGGTGGCGT 60.321 50.000 0.00 0.00 0.00 5.68
545 565 0.802494 AAAATAGCAGAACGGTGGCG 59.198 50.000 0.00 0.00 0.00 5.69
546 566 1.132453 GGAAAATAGCAGAACGGTGGC 59.868 52.381 0.00 0.00 0.00 5.01
547 567 2.161609 GTGGAAAATAGCAGAACGGTGG 59.838 50.000 0.00 0.00 0.00 4.61
548 568 2.161609 GGTGGAAAATAGCAGAACGGTG 59.838 50.000 0.00 0.00 0.00 4.94
549 569 2.433436 GGTGGAAAATAGCAGAACGGT 58.567 47.619 0.00 0.00 0.00 4.83
550 570 1.396996 CGGTGGAAAATAGCAGAACGG 59.603 52.381 0.00 0.00 0.00 4.44
551 571 2.073816 ACGGTGGAAAATAGCAGAACG 58.926 47.619 0.00 0.00 0.00 3.95
552 572 3.821841 CAACGGTGGAAAATAGCAGAAC 58.178 45.455 0.00 0.00 0.00 3.01
812 855 2.203182 AAGGGACGGTGGTGGAGA 59.797 61.111 0.00 0.00 0.00 3.71
814 857 3.948719 GCAAGGGACGGTGGTGGA 61.949 66.667 0.00 0.00 0.00 4.02
1238 1303 4.996434 GATGGAGCGGCGGGATGG 62.996 72.222 9.78 0.00 0.00 3.51
1324 1402 0.542702 AGCCCCAAATTCACCACCAG 60.543 55.000 0.00 0.00 0.00 4.00
1348 1426 1.557443 AACGCAGCTTTTCCTCGTCG 61.557 55.000 0.00 0.00 32.53 5.12
1351 1429 2.119671 AAAAACGCAGCTTTTCCTCG 57.880 45.000 0.00 0.00 28.87 4.63
1378 1456 1.630148 GTCACGAGACCAGGAAATCG 58.370 55.000 1.01 2.08 38.89 3.34
1437 1515 1.152881 GATTCTTGCCGCCTGGGAT 60.153 57.895 0.00 0.00 38.47 3.85
1439 1517 2.830370 GGATTCTTGCCGCCTGGG 60.830 66.667 0.00 0.00 39.58 4.45
1440 1518 2.045045 TGGATTCTTGCCGCCTGG 60.045 61.111 0.00 0.00 38.77 4.45
1444 1522 2.859992 AGAACTGGATTCTTGCCGC 58.140 52.632 0.00 0.00 46.05 6.53
1487 1581 4.963276 TGACCATTAAATTCGAAGGCTG 57.037 40.909 3.35 0.00 0.00 4.85
1567 1662 7.379529 AGTTGCAGTTGTTCATTAAATTCGAAG 59.620 33.333 3.35 0.00 0.00 3.79
1618 1713 4.324669 GCAAATTCGAAGGCTAGAAAAAGC 59.675 41.667 3.35 9.07 41.99 3.51
1630 1725 9.270576 GATATATATGTGCAAGCAAATTCGAAG 57.729 33.333 3.35 0.00 0.00 3.79
1648 1743 8.097662 TCACTCACTCAGTCACTCGATATATAT 58.902 37.037 0.00 0.00 30.26 0.86
1743 1851 6.874134 AGTAGCACTTTTACCACATCAACTAG 59.126 38.462 0.00 0.00 0.00 2.57
1765 1873 4.838986 AGTCCAAGCACTAAAGAGGAAGTA 59.161 41.667 0.00 0.00 0.00 2.24
1773 1881 7.440523 AGAACAATAAGTCCAAGCACTAAAG 57.559 36.000 0.00 0.00 0.00 1.85
1777 1885 5.471456 CAGAAGAACAATAAGTCCAAGCACT 59.529 40.000 0.00 0.00 0.00 4.40
1951 2070 5.359756 AGTTGCCTGAAATGTTTTCCTTTC 58.640 37.500 0.00 0.00 35.82 2.62
2051 2170 4.319694 GCTTGATTGGGCACAAAATGTTTC 60.320 41.667 4.97 0.00 40.55 2.78
2352 2471 1.472878 TCGATTAGCTGAGTCGCAAGT 59.527 47.619 11.02 0.00 35.48 3.16
2504 2672 4.083802 GGAGACCATTAATGCAACGATAGC 60.084 45.833 10.11 0.00 42.67 2.97
2613 2781 7.811713 CGGATATGAACGATATGATAGCATGAT 59.188 37.037 3.11 0.00 35.94 2.45
2638 2806 4.755123 ACATGAGTCTTGTTACCTTTTCCG 59.245 41.667 0.00 0.00 0.00 4.30
2719 2887 4.204012 CCTTACGCCCTTGATTCCATAAA 58.796 43.478 0.00 0.00 0.00 1.40
2956 3137 6.039717 TGGAAAAGCCAAACATCATATAGCTC 59.960 38.462 0.00 0.00 45.87 4.09
3012 3193 5.064198 CACATTTCCGCGAAGGTAATAGAAA 59.936 40.000 8.23 5.71 37.83 2.52
3064 3245 3.589951 ACATATTCCCAAGCAGCAGAT 57.410 42.857 0.00 0.00 0.00 2.90
3069 3251 7.750229 AACATACATACATATTCCCAAGCAG 57.250 36.000 0.00 0.00 0.00 4.24
3278 3464 5.882557 ACTCAAAAGCAAATATCATCCGAGT 59.117 36.000 0.00 0.00 0.00 4.18
3306 3534 9.280174 CCAGTTAAGATCACAGGTTTACTTTTA 57.720 33.333 0.00 0.00 0.00 1.52
3316 3544 4.543590 AGACACCAGTTAAGATCACAGG 57.456 45.455 0.00 0.00 0.00 4.00
3321 3549 8.779354 ATAGAACAAAGACACCAGTTAAGATC 57.221 34.615 0.00 0.00 0.00 2.75
3329 3557 4.821805 ACCACAATAGAACAAAGACACCAG 59.178 41.667 0.00 0.00 0.00 4.00
3347 3575 9.996554 CAGACTAAAATACCATATCATACCACA 57.003 33.333 0.00 0.00 0.00 4.17
3606 3834 3.243873 TGTGACAGAGCTAACAACCAGAG 60.244 47.826 0.00 0.00 0.00 3.35
3607 3835 2.698274 TGTGACAGAGCTAACAACCAGA 59.302 45.455 0.00 0.00 0.00 3.86
3639 3867 8.519526 TGCACAAGGACAATTTAAAACTATAGG 58.480 33.333 4.43 0.00 0.00 2.57
3843 4071 2.702270 AGTGGGATTTTTCAGCCCTT 57.298 45.000 0.00 0.00 42.52 3.95
3844 4072 2.634453 CAAAGTGGGATTTTTCAGCCCT 59.366 45.455 0.00 0.00 42.52 5.19
3864 4092 5.010922 ACTGTTTCCTAAAGCATTGCAATCA 59.989 36.000 9.53 0.00 0.00 2.57
3900 4128 5.576447 AACAAAAACAGAATGGACGAACT 57.424 34.783 0.00 0.00 43.62 3.01
3906 4134 5.240623 AGCATCGTAACAAAAACAGAATGGA 59.759 36.000 0.00 0.00 43.62 3.41
3945 4173 2.167662 GGACGTTTTTGGGGATGTGAT 58.832 47.619 0.00 0.00 0.00 3.06
3967 4195 1.684983 GATTCCGTATCAGGTCGGGAA 59.315 52.381 3.85 0.00 45.79 3.97
4012 4240 2.516227 TGTGTTTGTTTGGTCTGGGA 57.484 45.000 0.00 0.00 0.00 4.37
4193 4421 3.306502 GGGAGGACTACATTCGTCACAAA 60.307 47.826 0.00 0.00 34.53 2.83
4254 4482 1.349688 ACACCACGGGAACACACATAT 59.650 47.619 0.00 0.00 0.00 1.78
4358 4586 2.986050 TCCTTTCCAGTACCTCCAAGT 58.014 47.619 0.00 0.00 0.00 3.16
4552 4780 2.875087 TGGCATTGCAGCATCATTAC 57.125 45.000 11.39 0.00 35.83 1.89
4613 4841 2.532531 AATCGCATTGCAAGAACGAG 57.467 45.000 20.88 6.42 36.05 4.18
4648 4876 9.071276 ACACAGATCATGTATTCTTCTTGTTTT 57.929 29.630 0.99 0.00 41.41 2.43
4766 4997 8.592809 GGAGGAGATGTATCAATCTAATCAAGT 58.407 37.037 0.00 0.00 37.03 3.16
4838 5130 8.799091 CAACAGTATTCAGATTGTTAGAGTACG 58.201 37.037 0.00 0.00 32.86 3.67
4850 5142 8.067751 TCTACACTAAGCAACAGTATTCAGAT 57.932 34.615 0.00 0.00 0.00 2.90
4852 5144 8.709386 ATTCTACACTAAGCAACAGTATTCAG 57.291 34.615 0.00 0.00 0.00 3.02
4853 5145 9.582431 GTATTCTACACTAAGCAACAGTATTCA 57.418 33.333 0.00 0.00 0.00 2.57
4854 5146 9.804758 AGTATTCTACACTAAGCAACAGTATTC 57.195 33.333 0.00 0.00 0.00 1.75
4934 5226 8.504005 ACTACAAATACTTATAATGCCGCATTC 58.496 33.333 21.74 0.00 35.54 2.67
5028 5320 9.099071 ACTAATGATGAGCATAATTAGACCTCT 57.901 33.333 24.58 7.70 35.78 3.69
5190 5717 9.241919 TCAGTGTATGTGTATCCATTCAAAAAT 57.758 29.630 0.00 0.00 0.00 1.82
5201 5728 7.402640 GCTTTAAGCTTCAGTGTATGTGTATC 58.597 38.462 10.01 0.00 38.45 2.24
5202 5729 6.316390 GGCTTTAAGCTTCAGTGTATGTGTAT 59.684 38.462 16.89 0.00 41.99 2.29
5203 5730 5.642063 GGCTTTAAGCTTCAGTGTATGTGTA 59.358 40.000 16.89 0.00 41.99 2.90
5204 5731 4.455877 GGCTTTAAGCTTCAGTGTATGTGT 59.544 41.667 16.89 0.00 41.99 3.72
5205 5732 4.697352 AGGCTTTAAGCTTCAGTGTATGTG 59.303 41.667 16.89 0.00 41.99 3.21
5206 5733 4.697352 CAGGCTTTAAGCTTCAGTGTATGT 59.303 41.667 16.89 0.00 41.99 2.29
5396 5951 6.886307 ACACAAAACAAGTGTCAAAACAATG 58.114 32.000 0.00 0.00 46.57 2.82
5423 5979 1.459450 TTTCCTACCGCCATGCTTTC 58.541 50.000 0.00 0.00 0.00 2.62
5428 5984 1.597742 CAGGATTTCCTACCGCCATG 58.402 55.000 0.00 0.00 46.65 3.66
5479 6035 4.273480 CCATGCTTCATAGTTAACGAAGGG 59.727 45.833 17.85 10.38 37.27 3.95
5527 6083 9.190858 CCATTCATTGAACTCGTTTGAAAATAA 57.809 29.630 0.15 0.00 30.81 1.40
5613 6171 2.125512 GGCACCACAGGCTAGTCG 60.126 66.667 0.00 0.00 0.00 4.18
5615 6173 3.072476 CTGGCACCACAGGCTAGT 58.928 61.111 0.00 0.00 35.41 2.57
5652 6225 8.224389 ACACAGCTCATAAAAATATATGCACA 57.776 30.769 0.00 0.00 34.05 4.57
5660 6233 7.994425 TGAGGAAACACAGCTCATAAAAATA 57.006 32.000 0.00 0.00 0.00 1.40
5774 6408 8.133627 GTGTACACTTGTTACAGATATATCGGT 58.866 37.037 18.92 20.12 38.69 4.69
5806 6443 5.672051 TGTTGTCGTAAAAGAAACGCATAG 58.328 37.500 0.00 0.00 40.12 2.23
5877 6540 8.187913 TGTAGAAATGTCCAAAATTCCATTCA 57.812 30.769 0.00 0.00 0.00 2.57
5914 6577 1.614317 GCCAAATATCCAGCGCCCTAT 60.614 52.381 2.29 0.00 0.00 2.57
5917 6580 2.908073 CGCCAAATATCCAGCGCCC 61.908 63.158 2.29 0.00 42.31 6.13
5941 6604 2.121963 AGGGGGAAGCACCACTCA 60.122 61.111 2.41 0.00 41.55 3.41
6011 6677 6.266131 TGATAAATACATCTGGGGAGCTTT 57.734 37.500 0.00 0.00 0.00 3.51
6122 6792 3.636679 TCTGAGGTATCTACAGCTTGCT 58.363 45.455 0.00 0.00 0.00 3.91
6231 6901 8.978564 TCGCAAAATAGAAATTTAAATGCAGA 57.021 26.923 0.39 0.00 36.67 4.26
6271 6941 1.814169 GCCGAAAGAACTAGGCCCG 60.814 63.158 0.00 0.00 43.54 6.13
6272 6942 4.220413 GCCGAAAGAACTAGGCCC 57.780 61.111 0.00 0.00 43.54 5.80
6275 6945 2.159085 AGAATCGGCCGAAAGAACTAGG 60.159 50.000 34.66 0.00 0.00 3.02
6276 6946 3.117046 GAGAATCGGCCGAAAGAACTAG 58.883 50.000 34.66 0.00 0.00 2.57
6277 6947 2.159142 GGAGAATCGGCCGAAAGAACTA 60.159 50.000 34.66 6.66 34.37 2.24
6278 6948 1.405661 GGAGAATCGGCCGAAAGAACT 60.406 52.381 34.66 24.26 34.37 3.01
6279 6949 1.007580 GGAGAATCGGCCGAAAGAAC 58.992 55.000 34.66 20.98 34.37 3.01
6280 6950 0.902531 AGGAGAATCGGCCGAAAGAA 59.097 50.000 34.66 9.45 34.37 2.52
6281 6951 1.681793 CTAGGAGAATCGGCCGAAAGA 59.318 52.381 34.66 9.93 34.37 2.52
6282 6952 1.681793 TCTAGGAGAATCGGCCGAAAG 59.318 52.381 34.66 19.07 34.37 2.62
6283 6953 1.771565 TCTAGGAGAATCGGCCGAAA 58.228 50.000 34.66 11.34 34.37 3.46
6284 6954 1.771565 TTCTAGGAGAATCGGCCGAA 58.228 50.000 34.66 16.30 34.37 4.30
6285 6955 1.996798 ATTCTAGGAGAATCGGCCGA 58.003 50.000 33.12 33.12 40.75 5.54
6293 6963 6.039941 GTCCGATTCTCAAGATTCTAGGAGAA 59.960 42.308 22.65 22.65 46.74 2.87
6294 6964 5.533154 GTCCGATTCTCAAGATTCTAGGAGA 59.467 44.000 11.81 11.81 34.77 3.71
6295 6965 5.278758 GGTCCGATTCTCAAGATTCTAGGAG 60.279 48.000 8.33 8.33 0.00 3.69
6296 6966 4.585162 GGTCCGATTCTCAAGATTCTAGGA 59.415 45.833 0.00 0.00 0.00 2.94
6297 6967 4.586841 AGGTCCGATTCTCAAGATTCTAGG 59.413 45.833 0.00 0.00 0.00 3.02
6298 6968 5.278758 GGAGGTCCGATTCTCAAGATTCTAG 60.279 48.000 0.00 0.00 0.00 2.43
6299 6969 4.585162 GGAGGTCCGATTCTCAAGATTCTA 59.415 45.833 0.00 0.00 0.00 2.10
6300 6970 3.386402 GGAGGTCCGATTCTCAAGATTCT 59.614 47.826 0.00 0.00 0.00 2.40
6301 6971 3.493524 GGGAGGTCCGATTCTCAAGATTC 60.494 52.174 0.00 0.00 36.71 2.52
6302 6972 2.436173 GGGAGGTCCGATTCTCAAGATT 59.564 50.000 0.00 0.00 36.71 2.40
6307 6977 2.667470 CTAAGGGAGGTCCGATTCTCA 58.333 52.381 0.00 0.00 41.52 3.27
6309 6979 1.062810 AGCTAAGGGAGGTCCGATTCT 60.063 52.381 0.00 0.00 41.52 2.40
6311 6981 1.763545 GAAGCTAAGGGAGGTCCGATT 59.236 52.381 0.00 0.00 41.52 3.34
6317 6987 4.611564 TCTAGAAGAAGCTAAGGGAGGT 57.388 45.455 0.00 0.00 37.55 3.85
6318 6988 6.096673 GATTCTAGAAGAAGCTAAGGGAGG 57.903 45.833 11.53 0.00 37.62 4.30
6363 7033 9.892130 CCTAGTTGTTTTGAACTATCTAGGATT 57.108 33.333 19.16 0.00 42.27 3.01
6364 7034 9.268282 TCCTAGTTGTTTTGAACTATCTAGGAT 57.732 33.333 20.73 0.00 42.73 3.24
6365 7035 8.660295 TCCTAGTTGTTTTGAACTATCTAGGA 57.340 34.615 20.73 20.73 43.78 2.94
6366 7036 9.892130 AATCCTAGTTGTTTTGAACTATCTAGG 57.108 33.333 18.54 18.54 41.77 3.02
6369 7039 9.220767 GACAATCCTAGTTGTTTTGAACTATCT 57.779 33.333 0.72 0.00 42.08 1.98
6371 7041 8.918202 TGACAATCCTAGTTGTTTTGAACTAT 57.082 30.769 0.72 0.00 42.08 2.12
6372 7042 8.740123 TTGACAATCCTAGTTGTTTTGAACTA 57.260 30.769 0.72 0.00 42.08 2.24
6374 7044 8.696410 TTTTGACAATCCTAGTTGTTTTGAAC 57.304 30.769 0.72 0.00 42.08 3.18
6401 7071 9.504708 CTTCTCCTAGAATCTTGAATGCATATT 57.495 33.333 0.00 0.00 33.13 1.28
6403 7073 6.933521 GCTTCTCCTAGAATCTTGAATGCATA 59.066 38.462 0.00 0.00 33.13 3.14
6404 7074 5.764192 GCTTCTCCTAGAATCTTGAATGCAT 59.236 40.000 0.00 0.00 33.13 3.96
6405 7075 5.104610 AGCTTCTCCTAGAATCTTGAATGCA 60.105 40.000 0.00 0.00 33.13 3.96
6408 7078 5.163216 CCCAGCTTCTCCTAGAATCTTGAAT 60.163 44.000 0.00 0.00 33.13 2.57
6409 7079 4.163078 CCCAGCTTCTCCTAGAATCTTGAA 59.837 45.833 0.00 0.00 33.13 2.69
6410 7080 3.708631 CCCAGCTTCTCCTAGAATCTTGA 59.291 47.826 0.00 0.00 33.13 3.02
6411 7081 3.454082 ACCCAGCTTCTCCTAGAATCTTG 59.546 47.826 0.00 0.00 33.13 3.02
6412 7082 3.454082 CACCCAGCTTCTCCTAGAATCTT 59.546 47.826 0.00 0.00 33.13 2.40
6413 7083 3.037549 CACCCAGCTTCTCCTAGAATCT 58.962 50.000 0.00 0.00 33.13 2.40
6414 7084 2.103941 CCACCCAGCTTCTCCTAGAATC 59.896 54.545 0.00 0.00 33.13 2.52
6415 7085 2.122768 CCACCCAGCTTCTCCTAGAAT 58.877 52.381 0.00 0.00 33.13 2.40
6416 7086 1.078823 TCCACCCAGCTTCTCCTAGAA 59.921 52.381 0.00 0.00 32.50 2.10
6417 7087 0.710588 TCCACCCAGCTTCTCCTAGA 59.289 55.000 0.00 0.00 0.00 2.43
6418 7088 1.118838 CTCCACCCAGCTTCTCCTAG 58.881 60.000 0.00 0.00 0.00 3.02
6419 7089 0.325671 CCTCCACCCAGCTTCTCCTA 60.326 60.000 0.00 0.00 0.00 2.94
6420 7090 1.614824 CCTCCACCCAGCTTCTCCT 60.615 63.158 0.00 0.00 0.00 3.69
6422 7092 0.402121 AAACCTCCACCCAGCTTCTC 59.598 55.000 0.00 0.00 0.00 2.87
6425 7095 0.779997 ATCAAACCTCCACCCAGCTT 59.220 50.000 0.00 0.00 0.00 3.74
6426 7096 0.779997 AATCAAACCTCCACCCAGCT 59.220 50.000 0.00 0.00 0.00 4.24
6427 7097 1.177401 GAATCAAACCTCCACCCAGC 58.823 55.000 0.00 0.00 0.00 4.85
6428 7098 2.040278 TGAGAATCAAACCTCCACCCAG 59.960 50.000 0.00 0.00 45.97 4.45
6429 7099 2.061848 TGAGAATCAAACCTCCACCCA 58.938 47.619 0.00 0.00 45.97 4.51
6442 7112 6.098679 CGAATCTCCCATAGTCATGAGAATC 58.901 44.000 0.00 0.00 37.41 2.52
6443 7113 5.046735 CCGAATCTCCCATAGTCATGAGAAT 60.047 44.000 0.00 0.00 37.41 2.40
6444 7114 4.281941 CCGAATCTCCCATAGTCATGAGAA 59.718 45.833 0.00 0.00 37.41 2.87
6445 7115 3.829026 CCGAATCTCCCATAGTCATGAGA 59.171 47.826 0.00 0.00 38.17 3.27
6446 7116 3.576118 ACCGAATCTCCCATAGTCATGAG 59.424 47.826 0.00 0.00 33.67 2.90
6447 7117 3.574396 GACCGAATCTCCCATAGTCATGA 59.426 47.826 0.00 0.00 33.67 3.07
6448 7118 3.321968 TGACCGAATCTCCCATAGTCATG 59.678 47.826 0.00 0.00 0.00 3.07
6449 7119 3.576861 TGACCGAATCTCCCATAGTCAT 58.423 45.455 0.00 0.00 0.00 3.06
6450 7120 3.026707 TGACCGAATCTCCCATAGTCA 57.973 47.619 0.00 0.00 0.00 3.41
6451 7121 4.402056 TTTGACCGAATCTCCCATAGTC 57.598 45.455 0.00 0.00 0.00 2.59
6452 7122 4.469945 TCTTTTGACCGAATCTCCCATAGT 59.530 41.667 0.00 0.00 0.00 2.12
6453 7123 5.023533 TCTTTTGACCGAATCTCCCATAG 57.976 43.478 0.00 0.00 0.00 2.23
6454 7124 5.045869 AGTTCTTTTGACCGAATCTCCCATA 60.046 40.000 0.00 0.00 0.00 2.74
6455 7125 4.010349 GTTCTTTTGACCGAATCTCCCAT 58.990 43.478 0.00 0.00 0.00 4.00
6456 7126 3.072476 AGTTCTTTTGACCGAATCTCCCA 59.928 43.478 0.00 0.00 0.00 4.37
6458 7128 3.437049 CCAGTTCTTTTGACCGAATCTCC 59.563 47.826 0.00 0.00 0.00 3.71
6459 7129 3.437049 CCCAGTTCTTTTGACCGAATCTC 59.563 47.826 0.00 0.00 0.00 2.75
6460 7130 3.412386 CCCAGTTCTTTTGACCGAATCT 58.588 45.455 0.00 0.00 0.00 2.40
6461 7131 2.095212 GCCCAGTTCTTTTGACCGAATC 60.095 50.000 0.00 0.00 0.00 2.52
6463 7133 1.314730 GCCCAGTTCTTTTGACCGAA 58.685 50.000 0.00 0.00 0.00 4.30
6464 7134 0.536460 GGCCCAGTTCTTTTGACCGA 60.536 55.000 0.00 0.00 0.00 4.69
6465 7135 0.537371 AGGCCCAGTTCTTTTGACCG 60.537 55.000 0.00 0.00 0.00 4.79
6467 7137 2.306847 TCAAGGCCCAGTTCTTTTGAC 58.693 47.619 0.00 0.00 0.00 3.18
6469 7139 2.892852 TGATCAAGGCCCAGTTCTTTTG 59.107 45.455 0.00 0.00 0.00 2.44
6470 7140 3.160269 CTGATCAAGGCCCAGTTCTTTT 58.840 45.455 0.00 0.00 0.00 2.27
6471 7141 2.376518 TCTGATCAAGGCCCAGTTCTTT 59.623 45.455 0.00 0.00 0.00 2.52
6472 7142 1.988107 TCTGATCAAGGCCCAGTTCTT 59.012 47.619 0.00 0.00 0.00 2.52
6473 7143 1.661463 TCTGATCAAGGCCCAGTTCT 58.339 50.000 0.00 0.00 0.00 3.01
6474 7144 2.570135 GATCTGATCAAGGCCCAGTTC 58.430 52.381 12.66 0.00 0.00 3.01
6475 7145 1.213926 GGATCTGATCAAGGCCCAGTT 59.786 52.381 18.64 0.00 0.00 3.16
6476 7146 0.842635 GGATCTGATCAAGGCCCAGT 59.157 55.000 18.64 0.00 0.00 4.00
6477 7147 0.110104 GGGATCTGATCAAGGCCCAG 59.890 60.000 18.64 0.00 39.44 4.45
6478 7148 1.355718 GGGGATCTGATCAAGGCCCA 61.356 60.000 21.45 0.00 40.67 5.36
6479 7149 1.355718 TGGGGATCTGATCAAGGCCC 61.356 60.000 18.64 18.18 39.12 5.80
6480 7150 0.552848 TTGGGGATCTGATCAAGGCC 59.447 55.000 18.64 10.39 0.00 5.19
6481 7151 1.213926 ACTTGGGGATCTGATCAAGGC 59.786 52.381 18.64 1.95 40.41 4.35
6482 7152 4.778213 TTACTTGGGGATCTGATCAAGG 57.222 45.455 18.64 7.25 40.41 3.61
6483 7153 5.500234 TGTTTACTTGGGGATCTGATCAAG 58.500 41.667 18.64 15.55 41.46 3.02
6484 7154 5.500234 CTGTTTACTTGGGGATCTGATCAA 58.500 41.667 18.64 5.22 0.00 2.57
6485 7155 4.080356 CCTGTTTACTTGGGGATCTGATCA 60.080 45.833 18.64 0.00 0.00 2.92
6486 7156 4.455606 CCTGTTTACTTGGGGATCTGATC 58.544 47.826 9.18 9.18 0.00 2.92
6499 7169 2.230660 GCTTGACTTGGCCTGTTTACT 58.769 47.619 3.32 0.00 0.00 2.24
6549 7857 6.481976 TCTTCTGCTTAATCAACGAGACAAAA 59.518 34.615 0.00 0.00 0.00 2.44
6570 7878 7.497909 TCATCAATTAACCGGGAAACTATCTTC 59.502 37.037 6.32 0.00 0.00 2.87
6580 7890 5.047660 CCAGTTTTTCATCAATTAACCGGGA 60.048 40.000 6.32 0.00 0.00 5.14
6620 8061 5.125578 GTGAGTAGTCCACATGTGATCTACA 59.874 44.000 34.23 23.90 44.87 2.74
6631 8072 6.872020 GCTTTATACTTTGTGAGTAGTCCACA 59.128 38.462 0.00 0.00 43.79 4.17
6664 8105 7.556275 AGAATGTTTGTCAGACTAACCTTTCAA 59.444 33.333 25.18 11.65 33.87 2.69
6672 8113 6.260050 GGTGTTGAGAATGTTTGTCAGACTAA 59.740 38.462 1.31 0.00 34.20 2.24
6673 8114 5.758296 GGTGTTGAGAATGTTTGTCAGACTA 59.242 40.000 1.31 0.00 34.20 2.59
6674 8115 4.576463 GGTGTTGAGAATGTTTGTCAGACT 59.424 41.667 1.31 0.00 34.20 3.24
6675 8116 4.261197 GGGTGTTGAGAATGTTTGTCAGAC 60.261 45.833 0.00 0.00 34.20 3.51
6676 8117 3.882888 GGGTGTTGAGAATGTTTGTCAGA 59.117 43.478 0.00 0.00 34.20 3.27
6677 8118 3.631686 TGGGTGTTGAGAATGTTTGTCAG 59.368 43.478 0.00 0.00 34.20 3.51
6678 8119 3.625853 TGGGTGTTGAGAATGTTTGTCA 58.374 40.909 0.00 0.00 0.00 3.58
6679 8120 4.097892 AGTTGGGTGTTGAGAATGTTTGTC 59.902 41.667 0.00 0.00 0.00 3.18
6680 8121 4.023291 AGTTGGGTGTTGAGAATGTTTGT 58.977 39.130 0.00 0.00 0.00 2.83
6681 8122 4.654091 AGTTGGGTGTTGAGAATGTTTG 57.346 40.909 0.00 0.00 0.00 2.93
6695 8136 1.338769 GCTTGTGGTCGATAGTTGGGT 60.339 52.381 0.00 0.00 37.40 4.51
6697 8138 1.066143 AGGCTTGTGGTCGATAGTTGG 60.066 52.381 0.00 0.00 37.40 3.77
6728 8169 5.245526 GCTTATATTTAGGAACGGAGGGAGA 59.754 44.000 0.00 0.00 0.00 3.71
6733 8174 8.897872 TTTTAGGCTTATATTTAGGAACGGAG 57.102 34.615 0.00 0.00 0.00 4.63
6760 8203 8.509690 GCTCTGTATGTAGTACGTATTGGAATA 58.490 37.037 5.53 0.00 36.01 1.75
6774 8217 7.783090 ATCACTCATTTTGCTCTGTATGTAG 57.217 36.000 0.00 0.00 0.00 2.74
6815 8258 8.579482 TTGCGATACAAACTGCATACAGATGC 62.579 42.308 0.00 2.93 46.32 3.91
6816 8259 5.220643 TTGCGATACAAACTGCATACAGATG 60.221 40.000 0.00 1.26 39.97 2.90
6817 8260 4.875536 TTGCGATACAAACTGCATACAGAT 59.124 37.500 0.00 0.00 39.97 2.90
6818 8261 4.249661 TTGCGATACAAACTGCATACAGA 58.750 39.130 0.00 0.00 39.97 3.41
6819 8262 4.598406 TTGCGATACAAACTGCATACAG 57.402 40.909 0.00 0.00 40.84 2.74
6820 8263 6.705825 AGATATTGCGATACAAACTGCATACA 59.294 34.615 0.00 0.00 42.86 2.29
6821 8264 7.121974 AGATATTGCGATACAAACTGCATAC 57.878 36.000 0.00 0.00 42.86 2.39
6822 8265 8.825667 TTAGATATTGCGATACAAACTGCATA 57.174 30.769 0.00 0.00 42.86 3.14
6823 8266 7.728847 TTAGATATTGCGATACAAACTGCAT 57.271 32.000 0.00 0.00 42.86 3.96
6824 8267 7.546778 TTTAGATATTGCGATACAAACTGCA 57.453 32.000 0.00 0.00 42.86 4.41
6825 8268 8.835467 TTTTTAGATATTGCGATACAAACTGC 57.165 30.769 0.00 0.00 42.86 4.40
6826 8269 9.438291 CCTTTTTAGATATTGCGATACAAACTG 57.562 33.333 0.00 0.00 42.86 3.16
6827 8270 8.129211 GCCTTTTTAGATATTGCGATACAAACT 58.871 33.333 0.00 0.00 42.86 2.66
6828 8271 8.129211 AGCCTTTTTAGATATTGCGATACAAAC 58.871 33.333 0.00 0.00 42.86 2.93
6829 8272 8.220755 AGCCTTTTTAGATATTGCGATACAAA 57.779 30.769 0.00 0.00 42.86 2.83
6830 8273 7.801716 AGCCTTTTTAGATATTGCGATACAA 57.198 32.000 0.00 0.00 44.01 2.41
6831 8274 7.801716 AAGCCTTTTTAGATATTGCGATACA 57.198 32.000 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.