Multiple sequence alignment - TraesCS5A01G499900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G499900 | chr5A | 100.000 | 8305 | 0 | 0 | 1 | 8305 | 666235897 | 666227593 | 0.000000e+00 | 15337.0 |
1 | TraesCS5A01G499900 | chr5A | 91.205 | 830 | 64 | 3 | 2745 | 3565 | 510543702 | 510542873 | 0.000000e+00 | 1120.0 |
2 | TraesCS5A01G499900 | chr5A | 89.768 | 518 | 51 | 2 | 5225 | 5741 | 510542472 | 510541956 | 0.000000e+00 | 662.0 |
3 | TraesCS5A01G499900 | chr5A | 80.556 | 612 | 59 | 27 | 1077 | 1661 | 510544598 | 510544020 | 4.640000e-112 | 416.0 |
4 | TraesCS5A01G499900 | chr5A | 96.035 | 227 | 5 | 1 | 282 | 504 | 669988082 | 669987856 | 4.740000e-97 | 366.0 |
5 | TraesCS5A01G499900 | chr5A | 93.088 | 217 | 15 | 0 | 3674 | 3890 | 510542873 | 510542657 | 1.350000e-82 | 318.0 |
6 | TraesCS5A01G499900 | chr5A | 95.597 | 159 | 7 | 0 | 1760 | 1918 | 510544021 | 510543863 | 1.070000e-63 | 255.0 |
7 | TraesCS5A01G499900 | chr5A | 86.992 | 123 | 16 | 0 | 2469 | 2591 | 510543823 | 510543701 | 1.120000e-28 | 139.0 |
8 | TraesCS5A01G499900 | chr5A | 95.946 | 74 | 3 | 0 | 3947 | 4020 | 686507792 | 686507719 | 4.070000e-23 | 121.0 |
9 | TraesCS5A01G499900 | chr5A | 94.203 | 69 | 4 | 0 | 3947 | 4015 | 433389018 | 433389086 | 1.140000e-18 | 106.0 |
10 | TraesCS5A01G499900 | chr4D | 90.747 | 2572 | 109 | 32 | 5127 | 7618 | 485384831 | 485382309 | 0.000000e+00 | 3312.0 |
11 | TraesCS5A01G499900 | chr4D | 87.222 | 1980 | 128 | 58 | 517 | 2417 | 485389567 | 485387634 | 0.000000e+00 | 2139.0 |
12 | TraesCS5A01G499900 | chr4D | 92.929 | 1485 | 59 | 20 | 2415 | 3889 | 485387603 | 485386155 | 0.000000e+00 | 2119.0 |
13 | TraesCS5A01G499900 | chr4D | 88.564 | 787 | 52 | 9 | 7458 | 8217 | 485382408 | 485381633 | 0.000000e+00 | 920.0 |
14 | TraesCS5A01G499900 | chr4D | 89.967 | 299 | 17 | 9 | 4094 | 4389 | 485386064 | 485385776 | 2.830000e-99 | 374.0 |
15 | TraesCS5A01G499900 | chr4D | 80.297 | 269 | 30 | 15 | 4400 | 4649 | 485385661 | 485385397 | 1.840000e-41 | 182.0 |
16 | TraesCS5A01G499900 | chr4D | 83.333 | 192 | 12 | 6 | 106 | 285 | 485391224 | 485391041 | 8.630000e-35 | 159.0 |
17 | TraesCS5A01G499900 | chr4B | 88.053 | 1967 | 110 | 54 | 517 | 2417 | 618595979 | 618594072 | 0.000000e+00 | 2215.0 |
18 | TraesCS5A01G499900 | chr4B | 94.070 | 1467 | 52 | 14 | 2432 | 3889 | 618594025 | 618592585 | 0.000000e+00 | 2194.0 |
19 | TraesCS5A01G499900 | chr4B | 88.331 | 1654 | 73 | 40 | 4739 | 6304 | 618591598 | 618589977 | 0.000000e+00 | 1875.0 |
20 | TraesCS5A01G499900 | chr4B | 95.559 | 1171 | 38 | 7 | 6373 | 7542 | 618589979 | 618588822 | 0.000000e+00 | 1862.0 |
21 | TraesCS5A01G499900 | chr4B | 88.957 | 326 | 22 | 10 | 4068 | 4389 | 618592515 | 618592200 | 2.810000e-104 | 390.0 |
22 | TraesCS5A01G499900 | chr4B | 80.000 | 350 | 34 | 19 | 4400 | 4724 | 618592101 | 618591763 | 8.390000e-55 | 226.0 |
23 | TraesCS5A01G499900 | chr4B | 93.636 | 110 | 7 | 0 | 7543 | 7652 | 618588882 | 618588773 | 1.850000e-36 | 165.0 |
24 | TraesCS5A01G499900 | chr4B | 95.082 | 61 | 3 | 0 | 7656 | 7716 | 618588707 | 618588647 | 6.860000e-16 | 97.1 |
25 | TraesCS5A01G499900 | chr4B | 85.897 | 78 | 2 | 2 | 209 | 285 | 618596096 | 618596027 | 3.210000e-09 | 75.0 |
26 | TraesCS5A01G499900 | chr5B | 91.084 | 830 | 65 | 3 | 2745 | 3565 | 482289177 | 482290006 | 0.000000e+00 | 1114.0 |
27 | TraesCS5A01G499900 | chr5B | 90.664 | 482 | 45 | 0 | 5225 | 5706 | 482290404 | 482290885 | 7.030000e-180 | 641.0 |
28 | TraesCS5A01G499900 | chr5B | 82.437 | 558 | 82 | 11 | 7759 | 8303 | 656713193 | 656712639 | 2.710000e-129 | 473.0 |
29 | TraesCS5A01G499900 | chr5B | 81.884 | 552 | 91 | 7 | 7759 | 8303 | 473896625 | 473896076 | 2.730000e-124 | 457.0 |
30 | TraesCS5A01G499900 | chr5B | 78.793 | 646 | 63 | 31 | 1045 | 1661 | 482288259 | 482288859 | 4.740000e-97 | 366.0 |
31 | TraesCS5A01G499900 | chr5B | 92.991 | 214 | 15 | 0 | 3674 | 3887 | 482290006 | 482290219 | 6.260000e-81 | 313.0 |
32 | TraesCS5A01G499900 | chr5B | 95.597 | 159 | 7 | 0 | 1760 | 1918 | 482288858 | 482289016 | 1.070000e-63 | 255.0 |
33 | TraesCS5A01G499900 | chr5B | 83.908 | 261 | 41 | 1 | 5447 | 5706 | 482291895 | 482292155 | 1.790000e-61 | 248.0 |
34 | TraesCS5A01G499900 | chr5B | 87.166 | 187 | 21 | 1 | 4115 | 4298 | 482290218 | 482290404 | 8.450000e-50 | 209.0 |
35 | TraesCS5A01G499900 | chr5B | 86.992 | 123 | 16 | 0 | 2469 | 2591 | 482289056 | 482289178 | 1.120000e-28 | 139.0 |
36 | TraesCS5A01G499900 | chr5B | 97.333 | 75 | 1 | 1 | 3947 | 4021 | 159714790 | 159714717 | 8.750000e-25 | 126.0 |
37 | TraesCS5A01G499900 | chr5B | 97.333 | 75 | 1 | 1 | 3947 | 4021 | 536476093 | 536476166 | 8.750000e-25 | 126.0 |
38 | TraesCS5A01G499900 | chr5B | 95.833 | 72 | 2 | 1 | 3899 | 3969 | 159714988 | 159714917 | 1.890000e-21 | 115.0 |
39 | TraesCS5A01G499900 | chr5B | 97.059 | 68 | 2 | 0 | 3902 | 3969 | 536475900 | 536475967 | 1.890000e-21 | 115.0 |
40 | TraesCS5A01G499900 | chr5B | 97.059 | 68 | 2 | 0 | 3902 | 3969 | 562547494 | 562547427 | 1.890000e-21 | 115.0 |
41 | TraesCS5A01G499900 | chr5B | 91.139 | 79 | 7 | 0 | 3947 | 4025 | 241165833 | 241165755 | 3.170000e-19 | 108.0 |
42 | TraesCS5A01G499900 | chr5D | 90.843 | 830 | 67 | 3 | 2745 | 3565 | 402951824 | 402952653 | 0.000000e+00 | 1103.0 |
43 | TraesCS5A01G499900 | chr5D | 90.200 | 500 | 49 | 0 | 5225 | 5724 | 402953051 | 402953550 | 0.000000e+00 | 652.0 |
44 | TraesCS5A01G499900 | chr5D | 79.257 | 646 | 57 | 29 | 1045 | 1661 | 402950909 | 402951506 | 6.080000e-101 | 379.0 |
45 | TraesCS5A01G499900 | chr5D | 93.458 | 214 | 14 | 0 | 3674 | 3887 | 402952653 | 402952866 | 1.350000e-82 | 318.0 |
46 | TraesCS5A01G499900 | chr5D | 94.969 | 159 | 8 | 0 | 1760 | 1918 | 402951505 | 402951663 | 4.980000e-62 | 250.0 |
47 | TraesCS5A01G499900 | chr5D | 87.805 | 123 | 15 | 0 | 2469 | 2591 | 402951703 | 402951825 | 2.420000e-30 | 145.0 |
48 | TraesCS5A01G499900 | chr5D | 93.333 | 75 | 5 | 0 | 3895 | 3969 | 50591182 | 50591256 | 2.450000e-20 | 111.0 |
49 | TraesCS5A01G499900 | chr5D | 91.358 | 81 | 6 | 1 | 3947 | 4027 | 100856229 | 100856308 | 8.810000e-20 | 110.0 |
50 | TraesCS5A01G499900 | chr1A | 84.290 | 662 | 88 | 8 | 2742 | 3401 | 482796914 | 482797561 | 4.230000e-177 | 632.0 |
51 | TraesCS5A01G499900 | chr1A | 84.290 | 662 | 88 | 8 | 2742 | 3401 | 482803315 | 482803962 | 4.230000e-177 | 632.0 |
52 | TraesCS5A01G499900 | chr1A | 84.290 | 662 | 88 | 8 | 2742 | 3401 | 482809995 | 482810642 | 4.230000e-177 | 632.0 |
53 | TraesCS5A01G499900 | chr1A | 83.422 | 561 | 86 | 5 | 7733 | 8287 | 150726862 | 150727421 | 1.600000e-141 | 514.0 |
54 | TraesCS5A01G499900 | chr1A | 84.306 | 497 | 66 | 9 | 5221 | 5714 | 482812904 | 482813391 | 7.540000e-130 | 475.0 |
55 | TraesCS5A01G499900 | chr1A | 76.190 | 693 | 120 | 28 | 1249 | 1920 | 482794709 | 482795377 | 2.890000e-84 | 324.0 |
56 | TraesCS5A01G499900 | chr1A | 77.413 | 487 | 91 | 15 | 1444 | 1920 | 482799212 | 482799689 | 1.060000e-68 | 272.0 |
57 | TraesCS5A01G499900 | chr1A | 93.370 | 181 | 9 | 1 | 1256 | 1433 | 493917249 | 493917429 | 1.780000e-66 | 265.0 |
58 | TraesCS5A01G499900 | chr1A | 86.344 | 227 | 25 | 4 | 3670 | 3890 | 482798755 | 482798981 | 8.330000e-60 | 243.0 |
59 | TraesCS5A01G499900 | chr1A | 86.344 | 227 | 25 | 4 | 3670 | 3890 | 482805156 | 482805382 | 8.330000e-60 | 243.0 |
60 | TraesCS5A01G499900 | chr1A | 86.344 | 227 | 25 | 4 | 3670 | 3890 | 482811836 | 482812062 | 8.330000e-60 | 243.0 |
61 | TraesCS5A01G499900 | chr1A | 92.647 | 136 | 8 | 2 | 1081 | 1216 | 493917106 | 493917239 | 2.370000e-45 | 195.0 |
62 | TraesCS5A01G499900 | chr1A | 96.000 | 75 | 2 | 1 | 3947 | 4020 | 550727570 | 550727644 | 4.070000e-23 | 121.0 |
63 | TraesCS5A01G499900 | chr1A | 82.400 | 125 | 22 | 0 | 4096 | 4220 | 482799046 | 482799170 | 8.810000e-20 | 110.0 |
64 | TraesCS5A01G499900 | chr1A | 82.400 | 125 | 22 | 0 | 4096 | 4220 | 482805447 | 482805571 | 8.810000e-20 | 110.0 |
65 | TraesCS5A01G499900 | chr1A | 82.400 | 125 | 22 | 0 | 4096 | 4220 | 482812127 | 482812251 | 8.810000e-20 | 110.0 |
66 | TraesCS5A01G499900 | chr1D | 85.866 | 566 | 78 | 2 | 2851 | 3415 | 382921537 | 382922101 | 1.190000e-167 | 601.0 |
67 | TraesCS5A01G499900 | chr1D | 81.067 | 581 | 100 | 8 | 7731 | 8303 | 50707186 | 50706608 | 9.830000e-124 | 455.0 |
68 | TraesCS5A01G499900 | chr1D | 83.400 | 500 | 71 | 7 | 5219 | 5715 | 382908080 | 382908570 | 3.530000e-123 | 453.0 |
69 | TraesCS5A01G499900 | chr1D | 80.645 | 496 | 93 | 1 | 5208 | 5703 | 382926083 | 382926575 | 1.690000e-101 | 381.0 |
70 | TraesCS5A01G499900 | chr1D | 76.488 | 689 | 122 | 32 | 1249 | 1920 | 382893252 | 382893917 | 1.030000e-88 | 339.0 |
71 | TraesCS5A01G499900 | chr1D | 85.088 | 228 | 28 | 4 | 3669 | 3890 | 382898006 | 382898233 | 2.330000e-55 | 228.0 |
72 | TraesCS5A01G499900 | chr1D | 85.938 | 128 | 18 | 0 | 3441 | 3568 | 383164103 | 383164230 | 4.040000e-28 | 137.0 |
73 | TraesCS5A01G499900 | chr1D | 83.929 | 112 | 18 | 0 | 4109 | 4220 | 382898307 | 382898418 | 3.170000e-19 | 108.0 |
74 | TraesCS5A01G499900 | chr1D | 91.139 | 79 | 5 | 2 | 3947 | 4024 | 432918934 | 432918857 | 1.140000e-18 | 106.0 |
75 | TraesCS5A01G499900 | chr7D | 83.162 | 582 | 84 | 11 | 7732 | 8303 | 127768125 | 127767548 | 3.440000e-143 | 520.0 |
76 | TraesCS5A01G499900 | chr6B | 83.303 | 551 | 83 | 7 | 7759 | 8303 | 623340953 | 623340406 | 4.480000e-137 | 499.0 |
77 | TraesCS5A01G499900 | chr6B | 95.111 | 225 | 10 | 1 | 281 | 504 | 558656295 | 558656071 | 3.690000e-93 | 353.0 |
78 | TraesCS5A01G499900 | chr2B | 82.226 | 557 | 85 | 8 | 7759 | 8303 | 421093820 | 421093266 | 1.260000e-127 | 468.0 |
79 | TraesCS5A01G499900 | chr2B | 94.783 | 230 | 10 | 1 | 278 | 505 | 763962016 | 763962245 | 2.850000e-94 | 357.0 |
80 | TraesCS5A01G499900 | chr2B | 87.000 | 100 | 11 | 2 | 3892 | 3991 | 38701795 | 38701698 | 2.450000e-20 | 111.0 |
81 | TraesCS5A01G499900 | chr7A | 80.969 | 578 | 103 | 5 | 7732 | 8302 | 40025091 | 40024514 | 1.270000e-122 | 451.0 |
82 | TraesCS5A01G499900 | chr1B | 81.612 | 484 | 82 | 5 | 5209 | 5691 | 513164123 | 513164600 | 2.170000e-105 | 394.0 |
83 | TraesCS5A01G499900 | chr1B | 77.647 | 680 | 121 | 20 | 1249 | 1920 | 512982858 | 512983514 | 1.310000e-102 | 385.0 |
84 | TraesCS5A01G499900 | chr1B | 94.348 | 230 | 13 | 0 | 274 | 503 | 484209158 | 484209387 | 3.690000e-93 | 353.0 |
85 | TraesCS5A01G499900 | chr1B | 85.315 | 143 | 19 | 2 | 3444 | 3584 | 513471341 | 513471483 | 6.720000e-31 | 147.0 |
86 | TraesCS5A01G499900 | chr1B | 97.059 | 68 | 2 | 0 | 3902 | 3969 | 608366959 | 608367026 | 1.890000e-21 | 115.0 |
87 | TraesCS5A01G499900 | chr1B | 92.105 | 76 | 6 | 0 | 3947 | 4022 | 223356367 | 223356442 | 3.170000e-19 | 108.0 |
88 | TraesCS5A01G499900 | chr1B | 83.929 | 112 | 18 | 0 | 4109 | 4220 | 512989876 | 512989987 | 3.170000e-19 | 108.0 |
89 | TraesCS5A01G499900 | chr3A | 95.890 | 219 | 9 | 0 | 285 | 503 | 568158814 | 568159032 | 1.030000e-93 | 355.0 |
90 | TraesCS5A01G499900 | chr3A | 95.475 | 221 | 10 | 0 | 285 | 505 | 535225741 | 535225521 | 3.690000e-93 | 353.0 |
91 | TraesCS5A01G499900 | chr3A | 90.984 | 122 | 8 | 3 | 1081 | 1202 | 441572734 | 441572852 | 2.400000e-35 | 161.0 |
92 | TraesCS5A01G499900 | chr3A | 91.139 | 79 | 3 | 4 | 3947 | 4023 | 101441703 | 101441627 | 4.100000e-18 | 104.0 |
93 | TraesCS5A01G499900 | chr3A | 93.333 | 60 | 4 | 0 | 1373 | 1432 | 441572878 | 441572937 | 1.150000e-13 | 89.8 |
94 | TraesCS5A01G499900 | chr2D | 95.475 | 221 | 10 | 0 | 285 | 505 | 411735592 | 411735372 | 3.690000e-93 | 353.0 |
95 | TraesCS5A01G499900 | chr2D | 89.157 | 83 | 6 | 3 | 3947 | 4027 | 604700853 | 604700934 | 5.300000e-17 | 100.0 |
96 | TraesCS5A01G499900 | chr2A | 95.475 | 221 | 10 | 0 | 285 | 505 | 258346747 | 258346967 | 3.690000e-93 | 353.0 |
97 | TraesCS5A01G499900 | chr3B | 94.690 | 226 | 12 | 0 | 285 | 510 | 757951714 | 757951489 | 1.330000e-92 | 351.0 |
98 | TraesCS5A01G499900 | chr7B | 97.222 | 72 | 2 | 0 | 3947 | 4018 | 63124646 | 63124575 | 1.130000e-23 | 122.0 |
99 | TraesCS5A01G499900 | chr7B | 98.551 | 69 | 1 | 0 | 3947 | 4015 | 102756289 | 102756357 | 1.130000e-23 | 122.0 |
100 | TraesCS5A01G499900 | chr6D | 97.222 | 72 | 2 | 0 | 3947 | 4018 | 434447231 | 434447160 | 1.130000e-23 | 122.0 |
101 | TraesCS5A01G499900 | chr6A | 97.222 | 72 | 2 | 0 | 3947 | 4018 | 88082567 | 88082496 | 1.130000e-23 | 122.0 |
102 | TraesCS5A01G499900 | chr6A | 89.873 | 79 | 8 | 0 | 3947 | 4025 | 57708346 | 57708268 | 1.470000e-17 | 102.0 |
103 | TraesCS5A01G499900 | chr6A | 89.873 | 79 | 6 | 2 | 3947 | 4024 | 603303964 | 603303887 | 5.300000e-17 | 100.0 |
104 | TraesCS5A01G499900 | chr4A | 97.101 | 69 | 2 | 0 | 3901 | 3969 | 542612490 | 542612422 | 5.270000e-22 | 117.0 |
105 | TraesCS5A01G499900 | chr4A | 97.059 | 68 | 2 | 0 | 3902 | 3969 | 666831258 | 666831191 | 1.890000e-21 | 115.0 |
106 | TraesCS5A01G499900 | chr4A | 97.059 | 68 | 2 | 0 | 3902 | 3969 | 666841737 | 666841670 | 1.890000e-21 | 115.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G499900 | chr5A | 666227593 | 666235897 | 8304 | True | 15337.000000 | 15337 | 100.000000 | 1 | 8305 | 1 | chr5A.!!$R1 | 8304 |
1 | TraesCS5A01G499900 | chr5A | 510541956 | 510544598 | 2642 | True | 485.000000 | 1120 | 89.534333 | 1077 | 5741 | 6 | chr5A.!!$R4 | 4664 |
2 | TraesCS5A01G499900 | chr4D | 485381633 | 485391224 | 9591 | True | 1315.000000 | 3312 | 87.579857 | 106 | 8217 | 7 | chr4D.!!$R1 | 8111 |
3 | TraesCS5A01G499900 | chr4B | 618588647 | 618596096 | 7449 | True | 1011.011111 | 2215 | 89.953889 | 209 | 7716 | 9 | chr4B.!!$R1 | 7507 |
4 | TraesCS5A01G499900 | chr5B | 656712639 | 656713193 | 554 | True | 473.000000 | 473 | 82.437000 | 7759 | 8303 | 1 | chr5B.!!$R4 | 544 |
5 | TraesCS5A01G499900 | chr5B | 473896076 | 473896625 | 549 | True | 457.000000 | 457 | 81.884000 | 7759 | 8303 | 1 | chr5B.!!$R2 | 544 |
6 | TraesCS5A01G499900 | chr5B | 482288259 | 482292155 | 3896 | False | 410.625000 | 1114 | 88.399375 | 1045 | 5706 | 8 | chr5B.!!$F1 | 4661 |
7 | TraesCS5A01G499900 | chr5D | 402950909 | 402953550 | 2641 | False | 474.500000 | 1103 | 89.422000 | 1045 | 5724 | 6 | chr5D.!!$F3 | 4679 |
8 | TraesCS5A01G499900 | chr1A | 150726862 | 150727421 | 559 | False | 514.000000 | 514 | 83.422000 | 7733 | 8287 | 1 | chr1A.!!$F1 | 554 |
9 | TraesCS5A01G499900 | chr1A | 482809995 | 482813391 | 3396 | False | 365.000000 | 632 | 84.335000 | 2742 | 5714 | 4 | chr1A.!!$F4 | 2972 |
10 | TraesCS5A01G499900 | chr1A | 482794709 | 482805571 | 10862 | False | 320.750000 | 632 | 82.458875 | 1249 | 4220 | 8 | chr1A.!!$F3 | 2971 |
11 | TraesCS5A01G499900 | chr1D | 382921537 | 382926575 | 5038 | False | 491.000000 | 601 | 83.255500 | 2851 | 5703 | 2 | chr1D.!!$F5 | 2852 |
12 | TraesCS5A01G499900 | chr1D | 50706608 | 50707186 | 578 | True | 455.000000 | 455 | 81.067000 | 7731 | 8303 | 1 | chr1D.!!$R1 | 572 |
13 | TraesCS5A01G499900 | chr1D | 382893252 | 382893917 | 665 | False | 339.000000 | 339 | 76.488000 | 1249 | 1920 | 1 | chr1D.!!$F1 | 671 |
14 | TraesCS5A01G499900 | chr7D | 127767548 | 127768125 | 577 | True | 520.000000 | 520 | 83.162000 | 7732 | 8303 | 1 | chr7D.!!$R1 | 571 |
15 | TraesCS5A01G499900 | chr6B | 623340406 | 623340953 | 547 | True | 499.000000 | 499 | 83.303000 | 7759 | 8303 | 1 | chr6B.!!$R2 | 544 |
16 | TraesCS5A01G499900 | chr2B | 421093266 | 421093820 | 554 | True | 468.000000 | 468 | 82.226000 | 7759 | 8303 | 1 | chr2B.!!$R2 | 544 |
17 | TraesCS5A01G499900 | chr7A | 40024514 | 40025091 | 577 | True | 451.000000 | 451 | 80.969000 | 7732 | 8302 | 1 | chr7A.!!$R1 | 570 |
18 | TraesCS5A01G499900 | chr1B | 512982858 | 512983514 | 656 | False | 385.000000 | 385 | 77.647000 | 1249 | 1920 | 1 | chr1B.!!$F3 | 671 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
996 | 2314 | 0.027716 | CTCATCCACGACCGTCTACG | 59.972 | 60.0 | 0.00 | 0.00 | 39.44 | 3.51 | F |
1664 | 7378 | 0.107897 | TCGGCAAGTGCATCGGTAAT | 60.108 | 50.0 | 5.52 | 0.00 | 44.36 | 1.89 | F |
2192 | 10303 | 0.601558 | CGGGTTCGGTCAAAGAGAGA | 59.398 | 55.0 | 0.00 | 0.00 | 0.00 | 3.10 | F |
3891 | 13653 | 0.251916 | TCGCCCTTCCAATGGTACTG | 59.748 | 55.0 | 0.00 | 0.00 | 0.00 | 2.74 | F |
3921 | 13683 | 0.033796 | ACTCCCTCCGTCCACGAATA | 60.034 | 55.0 | 0.00 | 0.00 | 43.02 | 1.75 | F |
4008 | 13770 | 0.179145 | ACACTTATTCGCGGACGGAG | 60.179 | 55.0 | 6.13 | 0.00 | 40.63 | 4.63 | F |
4332 | 14336 | 0.244994 | TCTTCTGCTCCGTCTTCTGC | 59.755 | 55.0 | 0.00 | 0.00 | 0.00 | 4.26 | F |
4334 | 14338 | 0.244994 | TTCTGCTCCGTCTTCTGCTC | 59.755 | 55.0 | 0.00 | 0.00 | 0.00 | 4.26 | F |
4627 | 14761 | 0.249398 | GCCGCCTCCTCTGACTTTTA | 59.751 | 55.0 | 0.00 | 0.00 | 0.00 | 1.52 | F |
4685 | 14821 | 0.251832 | AGCTCGGAACAGAGGAGGAA | 60.252 | 55.0 | 4.42 | 0.00 | 38.63 | 3.36 | F |
4686 | 14822 | 0.608640 | GCTCGGAACAGAGGAGGAAA | 59.391 | 55.0 | 4.42 | 0.00 | 38.63 | 3.13 | F |
5023 | 16207 | 0.889186 | ACACATCCGGCCACTTGTTC | 60.889 | 55.0 | 2.24 | 0.00 | 0.00 | 3.18 | F |
6558 | 19125 | 0.400594 | GGGTGTAGACAAGCTTGGGT | 59.599 | 55.0 | 29.18 | 18.08 | 0.00 | 4.51 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2673 | 11362 | 0.249155 | TTGCAGCAAAACAGAGCAGC | 60.249 | 50.000 | 4.99 | 0.00 | 42.67 | 5.25 | R |
3607 | 12445 | 0.034059 | ACAGTTCAAGGTGGAGCGAG | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 | R |
3901 | 13663 | 0.033796 | ATTCGTGGACGGAGGGAGTA | 60.034 | 55.000 | 0.00 | 0.00 | 40.29 | 2.59 | R |
5800 | 18328 | 0.389391 | TACTTCCCGAGCATGCTAGC | 59.611 | 55.000 | 22.74 | 8.10 | 0.00 | 3.42 | R |
5855 | 18397 | 0.516877 | ATTTCGACCATGCACGTGTG | 59.483 | 50.000 | 18.38 | 8.35 | 0.00 | 3.82 | R |
5916 | 18458 | 1.544691 | GGAGGAGAAGTCGTACAAGCA | 59.455 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 | R |
6011 | 18563 | 0.316841 | CATGTCCAACCCGGGTTTTG | 59.683 | 55.000 | 36.59 | 28.11 | 36.00 | 2.44 | R |
6013 | 18565 | 1.906333 | GCATGTCCAACCCGGGTTT | 60.906 | 57.895 | 36.59 | 19.30 | 36.00 | 3.27 | R |
6392 | 18959 | 2.159824 | GCATGAGCTCATCGATGGATTG | 59.840 | 50.000 | 26.44 | 14.38 | 37.91 | 2.67 | R |
6393 | 18960 | 2.424557 | GCATGAGCTCATCGATGGATT | 58.575 | 47.619 | 26.44 | 10.46 | 37.91 | 3.01 | R |
6521 | 19088 | 3.440173 | CACCCGACATGAGCAGTAATTTT | 59.560 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 | R |
6674 | 19241 | 5.648178 | GCTACTCCTATAGCCTTCTTACC | 57.352 | 47.826 | 0.00 | 0.00 | 41.55 | 2.85 | R |
7981 | 21303 | 0.319641 | AAGTCGGAGTCGTTTGCTCC | 60.320 | 55.000 | 1.50 | 1.50 | 46.75 | 4.70 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
25 | 26 | 2.733301 | CAAACCATTGGCGTGGCA | 59.267 | 55.556 | 1.54 | 0.00 | 43.27 | 4.92 |
26 | 27 | 1.292860 | CAAACCATTGGCGTGGCAT | 59.707 | 52.632 | 1.54 | 0.00 | 43.27 | 4.40 |
27 | 28 | 0.529833 | CAAACCATTGGCGTGGCATA | 59.470 | 50.000 | 1.54 | 0.00 | 43.27 | 3.14 |
28 | 29 | 1.067283 | CAAACCATTGGCGTGGCATAA | 60.067 | 47.619 | 1.54 | 0.00 | 43.27 | 1.90 |
29 | 30 | 1.484038 | AACCATTGGCGTGGCATAAT | 58.516 | 45.000 | 1.54 | 0.00 | 43.27 | 1.28 |
30 | 31 | 1.032014 | ACCATTGGCGTGGCATAATC | 58.968 | 50.000 | 1.54 | 0.00 | 43.27 | 1.75 |
31 | 32 | 0.314935 | CCATTGGCGTGGCATAATCC | 59.685 | 55.000 | 0.00 | 0.00 | 31.43 | 3.01 |
32 | 33 | 0.040157 | CATTGGCGTGGCATAATCCG | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
33 | 34 | 0.465460 | ATTGGCGTGGCATAATCCGT | 60.465 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
34 | 35 | 1.372838 | TTGGCGTGGCATAATCCGTG | 61.373 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
35 | 36 | 1.522806 | GGCGTGGCATAATCCGTGA | 60.523 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
36 | 37 | 1.641677 | GCGTGGCATAATCCGTGAC | 59.358 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
37 | 38 | 1.924335 | CGTGGCATAATCCGTGACG | 59.076 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
38 | 39 | 0.804544 | CGTGGCATAATCCGTGACGT | 60.805 | 55.000 | 3.64 | 0.00 | 0.00 | 4.34 |
39 | 40 | 1.365699 | GTGGCATAATCCGTGACGTT | 58.634 | 50.000 | 3.64 | 0.00 | 0.00 | 3.99 |
40 | 41 | 1.735571 | GTGGCATAATCCGTGACGTTT | 59.264 | 47.619 | 3.64 | 0.00 | 0.00 | 3.60 |
41 | 42 | 2.004017 | TGGCATAATCCGTGACGTTTC | 58.996 | 47.619 | 3.64 | 0.00 | 0.00 | 2.78 |
42 | 43 | 2.277084 | GGCATAATCCGTGACGTTTCT | 58.723 | 47.619 | 3.64 | 0.00 | 0.00 | 2.52 |
43 | 44 | 2.030457 | GGCATAATCCGTGACGTTTCTG | 59.970 | 50.000 | 3.64 | 1.96 | 0.00 | 3.02 |
44 | 45 | 2.927477 | GCATAATCCGTGACGTTTCTGA | 59.073 | 45.455 | 3.64 | 0.00 | 0.00 | 3.27 |
45 | 46 | 3.369756 | GCATAATCCGTGACGTTTCTGAA | 59.630 | 43.478 | 3.64 | 0.00 | 0.00 | 3.02 |
46 | 47 | 4.142988 | GCATAATCCGTGACGTTTCTGAAA | 60.143 | 41.667 | 3.64 | 0.00 | 0.00 | 2.69 |
47 | 48 | 5.615984 | GCATAATCCGTGACGTTTCTGAAAA | 60.616 | 40.000 | 3.64 | 0.00 | 0.00 | 2.29 |
48 | 49 | 3.872560 | ATCCGTGACGTTTCTGAAAAC | 57.127 | 42.857 | 3.64 | 0.00 | 41.16 | 2.43 |
49 | 50 | 2.619147 | TCCGTGACGTTTCTGAAAACA | 58.381 | 42.857 | 3.64 | 3.51 | 44.13 | 2.83 |
50 | 51 | 2.605818 | TCCGTGACGTTTCTGAAAACAG | 59.394 | 45.455 | 3.64 | 2.60 | 44.13 | 3.16 |
51 | 52 | 2.605818 | CCGTGACGTTTCTGAAAACAGA | 59.394 | 45.455 | 3.64 | 0.00 | 44.13 | 3.41 |
52 | 53 | 3.302480 | CCGTGACGTTTCTGAAAACAGAG | 60.302 | 47.826 | 3.64 | 3.93 | 44.13 | 3.35 |
53 | 54 | 3.306166 | CGTGACGTTTCTGAAAACAGAGT | 59.694 | 43.478 | 4.09 | 0.98 | 44.13 | 3.24 |
54 | 55 | 4.201685 | CGTGACGTTTCTGAAAACAGAGTT | 60.202 | 41.667 | 4.09 | 0.00 | 44.13 | 3.01 |
55 | 56 | 5.628134 | GTGACGTTTCTGAAAACAGAGTTT | 58.372 | 37.500 | 4.09 | 0.00 | 44.13 | 2.66 |
56 | 57 | 5.733109 | GTGACGTTTCTGAAAACAGAGTTTC | 59.267 | 40.000 | 4.09 | 0.00 | 44.13 | 2.78 |
57 | 58 | 5.410132 | TGACGTTTCTGAAAACAGAGTTTCA | 59.590 | 36.000 | 4.09 | 0.87 | 44.13 | 2.69 |
58 | 59 | 6.093495 | TGACGTTTCTGAAAACAGAGTTTCAT | 59.907 | 34.615 | 4.09 | 0.00 | 44.38 | 2.57 |
59 | 60 | 6.487103 | ACGTTTCTGAAAACAGAGTTTCATC | 58.513 | 36.000 | 4.09 | 0.00 | 44.38 | 2.92 |
60 | 61 | 6.093495 | ACGTTTCTGAAAACAGAGTTTCATCA | 59.907 | 34.615 | 4.09 | 0.00 | 44.38 | 3.07 |
61 | 62 | 7.134815 | CGTTTCTGAAAACAGAGTTTCATCAT | 58.865 | 34.615 | 4.09 | 0.00 | 44.38 | 2.45 |
62 | 63 | 7.322222 | CGTTTCTGAAAACAGAGTTTCATCATC | 59.678 | 37.037 | 4.09 | 0.00 | 44.38 | 2.92 |
63 | 64 | 6.808008 | TCTGAAAACAGAGTTTCATCATCC | 57.192 | 37.500 | 1.16 | 0.00 | 44.38 | 3.51 |
64 | 65 | 5.707298 | TCTGAAAACAGAGTTTCATCATCCC | 59.293 | 40.000 | 1.16 | 0.00 | 44.38 | 3.85 |
65 | 66 | 4.766891 | TGAAAACAGAGTTTCATCATCCCC | 59.233 | 41.667 | 0.00 | 0.00 | 41.45 | 4.81 |
66 | 67 | 4.387026 | AAACAGAGTTTCATCATCCCCA | 57.613 | 40.909 | 0.00 | 0.00 | 0.00 | 4.96 |
67 | 68 | 3.356529 | ACAGAGTTTCATCATCCCCAC | 57.643 | 47.619 | 0.00 | 0.00 | 0.00 | 4.61 |
68 | 69 | 2.025887 | ACAGAGTTTCATCATCCCCACC | 60.026 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
69 | 70 | 1.566231 | AGAGTTTCATCATCCCCACCC | 59.434 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
70 | 71 | 0.631212 | AGTTTCATCATCCCCACCCC | 59.369 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
71 | 72 | 0.334676 | GTTTCATCATCCCCACCCCA | 59.665 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
72 | 73 | 1.062962 | GTTTCATCATCCCCACCCCAT | 60.063 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
73 | 74 | 0.557238 | TTCATCATCCCCACCCCATG | 59.443 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
74 | 75 | 1.532316 | CATCATCCCCACCCCATGC | 60.532 | 63.158 | 0.00 | 0.00 | 0.00 | 4.06 |
75 | 76 | 2.013964 | ATCATCCCCACCCCATGCA | 61.014 | 57.895 | 0.00 | 0.00 | 0.00 | 3.96 |
76 | 77 | 1.373843 | ATCATCCCCACCCCATGCAT | 61.374 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
77 | 78 | 1.835267 | CATCCCCACCCCATGCATG | 60.835 | 63.158 | 20.19 | 20.19 | 0.00 | 4.06 |
78 | 79 | 2.326974 | ATCCCCACCCCATGCATGT | 61.327 | 57.895 | 24.58 | 4.09 | 0.00 | 3.21 |
79 | 80 | 2.592778 | ATCCCCACCCCATGCATGTG | 62.593 | 60.000 | 24.58 | 14.18 | 0.00 | 3.21 |
80 | 81 | 2.037687 | CCCACCCCATGCATGTGT | 59.962 | 61.111 | 24.58 | 17.89 | 0.00 | 3.72 |
81 | 82 | 2.352821 | CCCACCCCATGCATGTGTG | 61.353 | 63.158 | 27.33 | 27.33 | 0.00 | 3.82 |
82 | 83 | 1.607178 | CCACCCCATGCATGTGTGT | 60.607 | 57.895 | 29.63 | 20.07 | 30.95 | 3.72 |
83 | 84 | 1.186917 | CCACCCCATGCATGTGTGTT | 61.187 | 55.000 | 29.63 | 10.38 | 30.95 | 3.32 |
84 | 85 | 0.244450 | CACCCCATGCATGTGTGTTC | 59.756 | 55.000 | 26.53 | 0.00 | 0.00 | 3.18 |
85 | 86 | 0.899717 | ACCCCATGCATGTGTGTTCC | 60.900 | 55.000 | 24.58 | 0.00 | 0.00 | 3.62 |
86 | 87 | 1.606885 | CCCCATGCATGTGTGTTCCC | 61.607 | 60.000 | 24.58 | 0.00 | 0.00 | 3.97 |
87 | 88 | 0.899253 | CCCATGCATGTGTGTTCCCA | 60.899 | 55.000 | 24.58 | 0.00 | 0.00 | 4.37 |
88 | 89 | 1.187974 | CCATGCATGTGTGTTCCCAT | 58.812 | 50.000 | 24.58 | 0.00 | 0.00 | 4.00 |
89 | 90 | 1.134936 | CCATGCATGTGTGTTCCCATG | 60.135 | 52.381 | 24.58 | 1.51 | 41.08 | 3.66 |
90 | 91 | 1.546923 | CATGCATGTGTGTTCCCATGT | 59.453 | 47.619 | 18.91 | 0.00 | 40.42 | 3.21 |
91 | 92 | 1.246649 | TGCATGTGTGTTCCCATGTC | 58.753 | 50.000 | 0.00 | 0.00 | 40.42 | 3.06 |
92 | 93 | 1.202915 | TGCATGTGTGTTCCCATGTCT | 60.203 | 47.619 | 0.00 | 0.00 | 40.42 | 3.41 |
93 | 94 | 2.039613 | TGCATGTGTGTTCCCATGTCTA | 59.960 | 45.455 | 0.00 | 0.00 | 40.42 | 2.59 |
94 | 95 | 3.282021 | GCATGTGTGTTCCCATGTCTAT | 58.718 | 45.455 | 0.00 | 0.00 | 40.42 | 1.98 |
95 | 96 | 3.313526 | GCATGTGTGTTCCCATGTCTATC | 59.686 | 47.826 | 0.00 | 0.00 | 40.42 | 2.08 |
96 | 97 | 3.627395 | TGTGTGTTCCCATGTCTATCC | 57.373 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
97 | 98 | 3.181329 | TGTGTGTTCCCATGTCTATCCT | 58.819 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
98 | 99 | 3.197766 | TGTGTGTTCCCATGTCTATCCTC | 59.802 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
99 | 100 | 3.197766 | GTGTGTTCCCATGTCTATCCTCA | 59.802 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
100 | 101 | 3.197766 | TGTGTTCCCATGTCTATCCTCAC | 59.802 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
101 | 102 | 3.452627 | GTGTTCCCATGTCTATCCTCACT | 59.547 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
102 | 103 | 3.706594 | TGTTCCCATGTCTATCCTCACTC | 59.293 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
103 | 104 | 2.587522 | TCCCATGTCTATCCTCACTCG | 58.412 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
104 | 105 | 2.091830 | TCCCATGTCTATCCTCACTCGT | 60.092 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
105 | 106 | 2.695666 | CCCATGTCTATCCTCACTCGTT | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
106 | 107 | 3.491619 | CCCATGTCTATCCTCACTCGTTG | 60.492 | 52.174 | 0.00 | 0.00 | 0.00 | 4.10 |
107 | 108 | 3.131223 | CCATGTCTATCCTCACTCGTTGT | 59.869 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
108 | 109 | 4.382040 | CCATGTCTATCCTCACTCGTTGTT | 60.382 | 45.833 | 0.00 | 0.00 | 0.00 | 2.83 |
109 | 110 | 5.163550 | CCATGTCTATCCTCACTCGTTGTTA | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 2.41 |
110 | 111 | 5.970317 | TGTCTATCCTCACTCGTTGTTAA | 57.030 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
111 | 112 | 6.335471 | TGTCTATCCTCACTCGTTGTTAAA | 57.665 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
112 | 113 | 6.154445 | TGTCTATCCTCACTCGTTGTTAAAC | 58.846 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
113 | 114 | 6.015688 | TGTCTATCCTCACTCGTTGTTAAACT | 60.016 | 38.462 | 0.00 | 0.00 | 33.87 | 2.66 |
114 | 115 | 7.175467 | TGTCTATCCTCACTCGTTGTTAAACTA | 59.825 | 37.037 | 0.00 | 0.00 | 33.87 | 2.24 |
115 | 116 | 8.189460 | GTCTATCCTCACTCGTTGTTAAACTAT | 58.811 | 37.037 | 0.00 | 0.00 | 33.87 | 2.12 |
116 | 117 | 8.188799 | TCTATCCTCACTCGTTGTTAAACTATG | 58.811 | 37.037 | 0.00 | 0.00 | 33.87 | 2.23 |
117 | 118 | 5.475719 | TCCTCACTCGTTGTTAAACTATGG | 58.524 | 41.667 | 0.00 | 0.00 | 33.87 | 2.74 |
118 | 119 | 5.011329 | TCCTCACTCGTTGTTAAACTATGGT | 59.989 | 40.000 | 0.00 | 0.00 | 33.87 | 3.55 |
124 | 125 | 6.062434 | TCGTTGTTAAACTATGGTTGGTTG | 57.938 | 37.500 | 0.00 | 0.00 | 35.63 | 3.77 |
139 | 140 | 0.238553 | GGTTGCGTCTTGCTTCTTCC | 59.761 | 55.000 | 0.00 | 0.00 | 46.63 | 3.46 |
148 | 149 | 4.035675 | CGTCTTGCTTCTTCCTTGTCTTTT | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
178 | 179 | 5.687285 | TCTTTTTGCGAAATTGCTTCTTCTC | 59.313 | 36.000 | 0.00 | 0.00 | 35.36 | 2.87 |
188 | 189 | 7.224362 | CGAAATTGCTTCTTCTCTGTCATATCT | 59.776 | 37.037 | 0.00 | 0.00 | 31.20 | 1.98 |
194 | 195 | 8.194104 | TGCTTCTTCTCTGTCATATCTTACTTC | 58.806 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
196 | 197 | 7.589958 | TCTTCTCTGTCATATCTTACTTCCC | 57.410 | 40.000 | 0.00 | 0.00 | 0.00 | 3.97 |
204 | 205 | 4.712829 | TCATATCTTACTTCCCGGTCAACA | 59.287 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
205 | 206 | 3.611766 | ATCTTACTTCCCGGTCAACAG | 57.388 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
206 | 207 | 2.600790 | TCTTACTTCCCGGTCAACAGA | 58.399 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
260 | 272 | 9.937577 | GTGCGAATTTGATCATTTACTTTTAAC | 57.062 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
261 | 273 | 9.134734 | TGCGAATTTGATCATTTACTTTTAACC | 57.865 | 29.630 | 0.00 | 0.00 | 0.00 | 2.85 |
295 | 308 | 9.978044 | GATTTCAATAACTTATACTACCTCCGT | 57.022 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
297 | 310 | 8.757982 | TTCAATAACTTATACTACCTCCGTCT | 57.242 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
298 | 311 | 9.851686 | TTCAATAACTTATACTACCTCCGTCTA | 57.148 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
299 | 312 | 9.499479 | TCAATAACTTATACTACCTCCGTCTAG | 57.501 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
300 | 313 | 8.728833 | CAATAACTTATACTACCTCCGTCTAGG | 58.271 | 40.741 | 0.00 | 0.00 | 42.82 | 3.02 |
310 | 323 | 4.571372 | CCTCCGTCTAGGTGAATAAGTC | 57.429 | 50.000 | 0.00 | 0.00 | 41.99 | 3.01 |
312 | 325 | 4.585162 | CCTCCGTCTAGGTGAATAAGTCAT | 59.415 | 45.833 | 0.00 | 0.00 | 38.90 | 3.06 |
314 | 327 | 6.145338 | TCCGTCTAGGTGAATAAGTCATTC | 57.855 | 41.667 | 0.00 | 0.00 | 40.27 | 2.67 |
315 | 328 | 4.976731 | CCGTCTAGGTGAATAAGTCATTCG | 59.023 | 45.833 | 0.00 | 0.00 | 45.25 | 3.34 |
322 | 335 | 5.697848 | GTGAATAAGTCATTCGCGTAGTT | 57.302 | 39.130 | 5.77 | 2.59 | 45.25 | 2.24 |
323 | 336 | 5.715264 | GTGAATAAGTCATTCGCGTAGTTC | 58.285 | 41.667 | 5.77 | 0.29 | 45.25 | 3.01 |
324 | 337 | 5.515626 | GTGAATAAGTCATTCGCGTAGTTCT | 59.484 | 40.000 | 5.77 | 0.00 | 45.25 | 3.01 |
326 | 339 | 6.910972 | TGAATAAGTCATTCGCGTAGTTCTAG | 59.089 | 38.462 | 5.77 | 0.00 | 45.25 | 2.43 |
327 | 340 | 3.694535 | AGTCATTCGCGTAGTTCTAGG | 57.305 | 47.619 | 5.77 | 0.00 | 0.00 | 3.02 |
329 | 342 | 3.065095 | AGTCATTCGCGTAGTTCTAGGTC | 59.935 | 47.826 | 5.77 | 0.00 | 0.00 | 3.85 |
330 | 343 | 3.011818 | TCATTCGCGTAGTTCTAGGTCA | 58.988 | 45.455 | 5.77 | 0.00 | 0.00 | 4.02 |
331 | 344 | 3.630769 | TCATTCGCGTAGTTCTAGGTCAT | 59.369 | 43.478 | 5.77 | 0.00 | 0.00 | 3.06 |
334 | 347 | 1.596260 | CGCGTAGTTCTAGGTCATCGA | 59.404 | 52.381 | 0.00 | 0.00 | 0.00 | 3.59 |
335 | 348 | 2.223611 | CGCGTAGTTCTAGGTCATCGAT | 59.776 | 50.000 | 0.00 | 0.00 | 0.00 | 3.59 |
336 | 349 | 3.303857 | CGCGTAGTTCTAGGTCATCGATT | 60.304 | 47.826 | 0.00 | 0.00 | 0.00 | 3.34 |
337 | 350 | 4.608951 | GCGTAGTTCTAGGTCATCGATTT | 58.391 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
338 | 351 | 4.441415 | GCGTAGTTCTAGGTCATCGATTTG | 59.559 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
339 | 352 | 5.732528 | GCGTAGTTCTAGGTCATCGATTTGA | 60.733 | 44.000 | 0.00 | 0.00 | 0.00 | 2.69 |
340 | 353 | 5.910166 | CGTAGTTCTAGGTCATCGATTTGAG | 59.090 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
341 | 354 | 4.688021 | AGTTCTAGGTCATCGATTTGAGC | 58.312 | 43.478 | 9.64 | 9.64 | 42.94 | 4.26 |
342 | 355 | 4.160439 | AGTTCTAGGTCATCGATTTGAGCA | 59.840 | 41.667 | 17.73 | 5.86 | 44.58 | 4.26 |
343 | 356 | 4.736126 | TCTAGGTCATCGATTTGAGCAA | 57.264 | 40.909 | 17.73 | 3.36 | 44.58 | 3.91 |
345 | 358 | 5.674525 | TCTAGGTCATCGATTTGAGCAATT | 58.325 | 37.500 | 17.73 | 3.20 | 44.58 | 2.32 |
346 | 359 | 6.816136 | TCTAGGTCATCGATTTGAGCAATTA | 58.184 | 36.000 | 17.73 | 4.05 | 44.58 | 1.40 |
347 | 360 | 7.272244 | TCTAGGTCATCGATTTGAGCAATTAA | 58.728 | 34.615 | 17.73 | 0.00 | 44.58 | 1.40 |
348 | 361 | 6.757897 | AGGTCATCGATTTGAGCAATTAAA | 57.242 | 33.333 | 17.73 | 0.00 | 44.58 | 1.52 |
349 | 362 | 7.338800 | AGGTCATCGATTTGAGCAATTAAAT | 57.661 | 32.000 | 17.73 | 0.00 | 44.58 | 1.40 |
350 | 363 | 8.450578 | AGGTCATCGATTTGAGCAATTAAATA | 57.549 | 30.769 | 17.73 | 0.00 | 44.58 | 1.40 |
351 | 364 | 9.071276 | AGGTCATCGATTTGAGCAATTAAATAT | 57.929 | 29.630 | 17.73 | 0.00 | 44.58 | 1.28 |
395 | 408 | 9.570468 | AAGTATATCACTAGATTTCTACACGGA | 57.430 | 33.333 | 0.00 | 0.00 | 36.04 | 4.69 |
397 | 410 | 9.776158 | GTATATCACTAGATTTCTACACGGATG | 57.224 | 37.037 | 0.00 | 0.00 | 35.67 | 3.51 |
398 | 411 | 6.716934 | ATCACTAGATTTCTACACGGATGT | 57.283 | 37.500 | 0.00 | 0.00 | 43.30 | 3.06 |
399 | 412 | 7.818997 | ATCACTAGATTTCTACACGGATGTA | 57.181 | 36.000 | 0.00 | 0.00 | 40.48 | 2.29 |
400 | 413 | 9.000486 | TATCACTAGATTTCTACACGGATGTAG | 58.000 | 37.037 | 7.95 | 7.95 | 45.22 | 2.74 |
460 | 473 | 9.931210 | CACATTTAAATAGTTAAATCCTCGACC | 57.069 | 33.333 | 15.94 | 0.00 | 44.50 | 4.79 |
461 | 474 | 9.901172 | ACATTTAAATAGTTAAATCCTCGACCT | 57.099 | 29.630 | 15.94 | 0.00 | 44.50 | 3.85 |
467 | 480 | 8.536340 | AATAGTTAAATCCTCGACCTAGAACT | 57.464 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
468 | 481 | 9.638176 | AATAGTTAAATCCTCGACCTAGAACTA | 57.362 | 33.333 | 0.00 | 0.00 | 32.97 | 2.24 |
469 | 482 | 7.332213 | AGTTAAATCCTCGACCTAGAACTAC | 57.668 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
471 | 484 | 1.661341 | TCCTCGACCTAGAACTACGC | 58.339 | 55.000 | 0.00 | 0.00 | 0.00 | 4.42 |
472 | 485 | 0.304098 | CCTCGACCTAGAACTACGCG | 59.696 | 60.000 | 3.53 | 3.53 | 0.00 | 6.01 |
474 | 487 | 1.662629 | CTCGACCTAGAACTACGCGAA | 59.337 | 52.381 | 15.93 | 0.00 | 0.00 | 4.70 |
475 | 488 | 2.283298 | TCGACCTAGAACTACGCGAAT | 58.717 | 47.619 | 15.93 | 0.00 | 0.00 | 3.34 |
476 | 489 | 2.031314 | TCGACCTAGAACTACGCGAATG | 59.969 | 50.000 | 15.93 | 4.47 | 0.00 | 2.67 |
478 | 491 | 3.361414 | GACCTAGAACTACGCGAATGAC | 58.639 | 50.000 | 15.93 | 0.66 | 0.00 | 3.06 |
480 | 493 | 3.442977 | ACCTAGAACTACGCGAATGACTT | 59.557 | 43.478 | 15.93 | 0.00 | 0.00 | 3.01 |
481 | 494 | 4.637534 | ACCTAGAACTACGCGAATGACTTA | 59.362 | 41.667 | 15.93 | 0.00 | 0.00 | 2.24 |
484 | 497 | 6.360148 | CCTAGAACTACGCGAATGACTTATTC | 59.640 | 42.308 | 15.93 | 3.24 | 41.46 | 1.75 |
485 | 498 | 5.647589 | AGAACTACGCGAATGACTTATTCA | 58.352 | 37.500 | 15.93 | 0.00 | 44.42 | 2.57 |
486 | 499 | 5.515626 | AGAACTACGCGAATGACTTATTCAC | 59.484 | 40.000 | 15.93 | 0.00 | 44.42 | 3.18 |
488 | 501 | 1.924524 | ACGCGAATGACTTATTCACCG | 59.075 | 47.619 | 15.93 | 0.00 | 44.42 | 4.94 |
490 | 503 | 2.216488 | CGCGAATGACTTATTCACCGAG | 59.784 | 50.000 | 0.00 | 0.00 | 44.42 | 4.63 |
492 | 505 | 3.243177 | GCGAATGACTTATTCACCGAGAC | 59.757 | 47.826 | 0.00 | 0.00 | 44.42 | 3.36 |
494 | 507 | 3.797256 | GAATGACTTATTCACCGAGACGG | 59.203 | 47.826 | 8.67 | 8.67 | 43.79 | 4.79 |
495 | 508 | 4.439700 | GAATGACTTATTCACCGAGACGGA | 60.440 | 45.833 | 16.99 | 0.00 | 45.73 | 4.69 |
496 | 509 | 6.238416 | GAATGACTTATTCACCGAGACGGAG | 61.238 | 48.000 | 16.99 | 9.14 | 45.73 | 4.63 |
506 | 519 | 2.021355 | CGAGACGGAGGTAGTACTGT | 57.979 | 55.000 | 5.39 | 0.00 | 0.00 | 3.55 |
510 | 1766 | 5.292765 | CGAGACGGAGGTAGTACTGTATTA | 58.707 | 45.833 | 5.39 | 0.00 | 0.00 | 0.98 |
512 | 1768 | 5.053145 | AGACGGAGGTAGTACTGTATTACG | 58.947 | 45.833 | 5.39 | 5.95 | 0.00 | 3.18 |
515 | 1771 | 4.811024 | CGGAGGTAGTACTGTATTACGTCA | 59.189 | 45.833 | 28.38 | 0.00 | 37.44 | 4.35 |
546 | 1802 | 4.442612 | CGAGGTCATTGGATCACTCTTCAT | 60.443 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
548 | 1804 | 4.472470 | AGGTCATTGGATCACTCTTCATCA | 59.528 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
549 | 1805 | 4.574013 | GGTCATTGGATCACTCTTCATCAC | 59.426 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
550 | 1806 | 5.181009 | GTCATTGGATCACTCTTCATCACA | 58.819 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
551 | 1807 | 5.293814 | GTCATTGGATCACTCTTCATCACAG | 59.706 | 44.000 | 0.00 | 0.00 | 0.00 | 3.66 |
554 | 1810 | 2.093288 | GGATCACTCTTCATCACAGGCA | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
555 | 1811 | 2.462456 | TCACTCTTCATCACAGGCAC | 57.538 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
556 | 1812 | 1.693606 | TCACTCTTCATCACAGGCACA | 59.306 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
557 | 1813 | 2.074576 | CACTCTTCATCACAGGCACAG | 58.925 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
564 | 1820 | 3.667282 | CACAGGCACAGGCACAGC | 61.667 | 66.667 | 0.00 | 0.00 | 43.71 | 4.40 |
580 | 1836 | 0.879400 | CAGCCAGAGCGGATCATGTC | 60.879 | 60.000 | 0.00 | 0.00 | 46.67 | 3.06 |
585 | 1841 | 1.931841 | CAGAGCGGATCATGTCAACTG | 59.068 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
595 | 1863 | 2.092699 | TCATGTCAACTGTGTTGACCCA | 60.093 | 45.455 | 29.03 | 18.23 | 46.01 | 4.51 |
641 | 1909 | 0.167470 | CTGTTGACCGCTGCTCATTG | 59.833 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
668 | 1936 | 4.778143 | CCCGCAGCACACCTACCC | 62.778 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
669 | 1937 | 3.706373 | CCGCAGCACACCTACCCT | 61.706 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
670 | 1938 | 2.434884 | CGCAGCACACCTACCCTG | 60.435 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
671 | 1939 | 2.750350 | GCAGCACACCTACCCTGT | 59.250 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
672 | 1940 | 1.376037 | GCAGCACACCTACCCTGTC | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
673 | 1941 | 1.831652 | GCAGCACACCTACCCTGTCT | 61.832 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
739 | 2031 | 3.181504 | ACGCCGCTAATAAAACCAATCAC | 60.182 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
743 | 2035 | 5.263185 | CCGCTAATAAAACCAATCACTTCG | 58.737 | 41.667 | 0.00 | 0.00 | 0.00 | 3.79 |
754 | 2047 | 4.154195 | ACCAATCACTTCGTCTGCATTAAC | 59.846 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
767 | 2060 | 1.135286 | GCATTAACAAGAGGCAGCACC | 60.135 | 52.381 | 0.00 | 0.00 | 39.61 | 5.01 |
768 | 2061 | 1.474077 | CATTAACAAGAGGCAGCACCC | 59.526 | 52.381 | 0.00 | 0.00 | 40.58 | 4.61 |
790 | 2087 | 4.488879 | CATAAAAGCAACAAGGAAGAGGC | 58.511 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
830 | 2127 | 4.470664 | CCCCATTTTTCCCAAGAATCATCA | 59.529 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
858 | 2160 | 6.319141 | ACCAATCGAGAAAAGAAAAAGGAG | 57.681 | 37.500 | 0.00 | 0.00 | 0.00 | 3.69 |
922 | 2240 | 2.421751 | TACTCCGTCTCTCCTTCCTG | 57.578 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
945 | 2263 | 2.234661 | GTCATCAGTCATCACCTCACCA | 59.765 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
947 | 2265 | 0.976641 | TCAGTCATCACCTCACCACC | 59.023 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
948 | 2266 | 0.686789 | CAGTCATCACCTCACCACCA | 59.313 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
949 | 2267 | 0.979665 | AGTCATCACCTCACCACCAG | 59.020 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
971 | 2289 | 2.201022 | AGACCAGACGCGTCCAACT | 61.201 | 57.895 | 34.08 | 23.78 | 0.00 | 3.16 |
972 | 2290 | 1.733399 | GACCAGACGCGTCCAACTC | 60.733 | 63.158 | 34.08 | 19.56 | 0.00 | 3.01 |
973 | 2291 | 2.143594 | GACCAGACGCGTCCAACTCT | 62.144 | 60.000 | 34.08 | 13.29 | 0.00 | 3.24 |
974 | 2292 | 1.006102 | CCAGACGCGTCCAACTCTT | 60.006 | 57.895 | 34.08 | 12.49 | 0.00 | 2.85 |
994 | 2312 | 0.750546 | CCCTCATCCACGACCGTCTA | 60.751 | 60.000 | 0.00 | 0.00 | 0.00 | 2.59 |
996 | 2314 | 0.027716 | CTCATCCACGACCGTCTACG | 59.972 | 60.000 | 0.00 | 0.00 | 39.44 | 3.51 |
1009 | 2327 | 1.001597 | CGTCTACGCCTCCTATCCAAC | 60.002 | 57.143 | 0.00 | 0.00 | 0.00 | 3.77 |
1016 | 2334 | 1.134068 | GCCTCCTATCCAACCAGTTCC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.62 |
1026 | 2356 | 4.410400 | CCAGTTCCTCCACCGGCC | 62.410 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
1664 | 7378 | 0.107897 | TCGGCAAGTGCATCGGTAAT | 60.108 | 50.000 | 5.52 | 0.00 | 44.36 | 1.89 |
1685 | 7410 | 4.389576 | CGCGCCCACAACTGCTTC | 62.390 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1686 | 7411 | 4.043200 | GCGCCCACAACTGCTTCC | 62.043 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
1690 | 7415 | 0.957888 | GCCCACAACTGCTTCCTCTC | 60.958 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
1693 | 7418 | 1.373497 | ACAACTGCTTCCTCTCGCG | 60.373 | 57.895 | 0.00 | 0.00 | 0.00 | 5.87 |
1710 | 7435 | 4.332543 | TCTCGCGTCAATCAAAATTATGCT | 59.667 | 37.500 | 5.77 | 0.00 | 0.00 | 3.79 |
1712 | 7437 | 5.498159 | TCGCGTCAATCAAAATTATGCTAC | 58.502 | 37.500 | 5.77 | 0.00 | 0.00 | 3.58 |
1713 | 7438 | 5.293324 | TCGCGTCAATCAAAATTATGCTACT | 59.707 | 36.000 | 5.77 | 0.00 | 0.00 | 2.57 |
1715 | 7440 | 5.909610 | GCGTCAATCAAAATTATGCTACTCC | 59.090 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1717 | 7442 | 7.679638 | GCGTCAATCAAAATTATGCTACTCCTT | 60.680 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
1722 | 7447 | 7.072177 | TCAAAATTATGCTACTCCTTGTTCG | 57.928 | 36.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1726 | 7451 | 2.060326 | TGCTACTCCTTGTTCGTTCG | 57.940 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1729 | 7454 | 2.325761 | CTACTCCTTGTTCGTTCGTGG | 58.674 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
1736 | 7488 | 2.702898 | TGTTCGTTCGTGGTCGATTA | 57.297 | 45.000 | 0.00 | 0.00 | 45.65 | 1.75 |
1738 | 7490 | 3.577667 | TGTTCGTTCGTGGTCGATTAAT | 58.422 | 40.909 | 0.00 | 0.00 | 45.65 | 1.40 |
1742 | 7494 | 4.985413 | TCGTTCGTGGTCGATTAATTACT | 58.015 | 39.130 | 0.00 | 0.00 | 45.65 | 2.24 |
1745 | 7497 | 5.275602 | CGTTCGTGGTCGATTAATTACTGTC | 60.276 | 44.000 | 0.00 | 0.00 | 45.65 | 3.51 |
1746 | 7498 | 4.345288 | TCGTGGTCGATTAATTACTGTCG | 58.655 | 43.478 | 0.00 | 7.44 | 41.35 | 4.35 |
1750 | 7502 | 6.020121 | CGTGGTCGATTAATTACTGTCGAAAT | 60.020 | 38.462 | 14.64 | 0.00 | 43.65 | 2.17 |
1751 | 7503 | 7.463648 | CGTGGTCGATTAATTACTGTCGAAATT | 60.464 | 37.037 | 14.64 | 0.00 | 43.65 | 1.82 |
1920 | 7672 | 2.924290 | GCAGACCTTCTTCGACATGTAC | 59.076 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1930 | 10030 | 6.031549 | TCTTCGACATGTACGCATTTATTG | 57.968 | 37.500 | 0.00 | 0.00 | 31.99 | 1.90 |
1954 | 10055 | 5.521372 | GCCAGCAAATTTCACTGATTAATCC | 59.479 | 40.000 | 12.90 | 0.00 | 33.10 | 3.01 |
1956 | 10057 | 6.351202 | CCAGCAAATTTCACTGATTAATCCCA | 60.351 | 38.462 | 12.90 | 0.00 | 33.10 | 4.37 |
1967 | 10073 | 6.696148 | CACTGATTAATCCCACGAGTACTTAC | 59.304 | 42.308 | 12.90 | 0.00 | 0.00 | 2.34 |
1973 | 10079 | 3.347216 | TCCCACGAGTACTTACTACCAC | 58.653 | 50.000 | 0.00 | 0.00 | 36.50 | 4.16 |
2026 | 10133 | 6.677781 | TTCCGACTAAATGAACCATCAATC | 57.322 | 37.500 | 0.00 | 0.00 | 39.49 | 2.67 |
2033 | 10140 | 4.701956 | AATGAACCATCAATCCACGAAC | 57.298 | 40.909 | 0.00 | 0.00 | 39.49 | 3.95 |
2040 | 10147 | 2.442212 | TCAATCCACGAACTAACGCA | 57.558 | 45.000 | 0.00 | 0.00 | 36.70 | 5.24 |
2130 | 10240 | 3.456277 | AGGTTAGTCAGATCCATTCCCAC | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
2137 | 10248 | 2.122768 | AGATCCATTCCCACCACTCTC | 58.877 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
2157 | 10268 | 2.548057 | TCAATTTCACTGCTCCGTTCAC | 59.452 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2170 | 10281 | 0.859232 | CGTTCACGTTCAGGTTCAGG | 59.141 | 55.000 | 0.00 | 0.00 | 34.11 | 3.86 |
2174 | 10285 | 0.859232 | CACGTTCAGGTTCAGGTTCG | 59.141 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2190 | 10301 | 1.042229 | TTCGGGTTCGGTCAAAGAGA | 58.958 | 50.000 | 0.00 | 0.00 | 36.95 | 3.10 |
2192 | 10303 | 0.601558 | CGGGTTCGGTCAAAGAGAGA | 59.398 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
2199 | 10310 | 2.230025 | TCGGTCAAAGAGAGAGCTTCTG | 59.770 | 50.000 | 3.55 | 0.00 | 35.87 | 3.02 |
2236 | 10350 | 2.613730 | TTCGACGATCAGTGACTGTC | 57.386 | 50.000 | 12.93 | 13.92 | 32.61 | 3.51 |
2246 | 10360 | 5.393569 | CGATCAGTGACTGTCCTTGAATACT | 60.394 | 44.000 | 12.93 | 2.94 | 32.61 | 2.12 |
2247 | 10361 | 6.183360 | CGATCAGTGACTGTCCTTGAATACTA | 60.183 | 42.308 | 12.93 | 0.00 | 32.61 | 1.82 |
2269 | 10805 | 4.058817 | AGTACTTGCGACTTTCTCCTTTG | 58.941 | 43.478 | 0.00 | 0.00 | 0.00 | 2.77 |
2333 | 10890 | 0.885879 | ACGTTATGCTGACCTCGACA | 59.114 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2363 | 10920 | 4.357279 | GCAAGCTCCCACTGGCCT | 62.357 | 66.667 | 3.32 | 0.00 | 29.63 | 5.19 |
2412 | 10979 | 7.799784 | TCGTGATCTCGAATATAATCGTGTAA | 58.200 | 34.615 | 16.88 | 0.00 | 43.19 | 2.41 |
2413 | 10980 | 7.743400 | TCGTGATCTCGAATATAATCGTGTAAC | 59.257 | 37.037 | 16.88 | 7.16 | 43.19 | 2.50 |
2430 | 11032 | 4.055360 | TGTAACGAGCAATTGATATCCGG | 58.945 | 43.478 | 10.34 | 0.00 | 0.00 | 5.14 |
2448 | 11050 | 1.393539 | CGGCGATTGACCTTGTAACTG | 59.606 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
2470 | 11072 | 5.657474 | TGACGGTTATTCTGGTAATCTGTC | 58.343 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2632 | 11321 | 3.670627 | GCCGTGCTTCTCTTGTTTAATGG | 60.671 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
2637 | 11326 | 3.861689 | GCTTCTCTTGTTTAATGGCATGC | 59.138 | 43.478 | 9.90 | 9.90 | 0.00 | 4.06 |
2638 | 11327 | 4.618927 | GCTTCTCTTGTTTAATGGCATGCA | 60.619 | 41.667 | 21.36 | 6.13 | 0.00 | 3.96 |
2639 | 11328 | 5.657474 | CTTCTCTTGTTTAATGGCATGCAT | 58.343 | 37.500 | 21.36 | 8.40 | 0.00 | 3.96 |
2640 | 11329 | 5.001237 | TCTCTTGTTTAATGGCATGCATG | 57.999 | 39.130 | 22.70 | 22.70 | 0.00 | 4.06 |
2641 | 11330 | 4.705991 | TCTCTTGTTTAATGGCATGCATGA | 59.294 | 37.500 | 30.64 | 10.92 | 0.00 | 3.07 |
2642 | 11331 | 5.361571 | TCTCTTGTTTAATGGCATGCATGAT | 59.638 | 36.000 | 30.64 | 12.92 | 0.00 | 2.45 |
2643 | 11332 | 5.979993 | TCTTGTTTAATGGCATGCATGATT | 58.020 | 33.333 | 30.64 | 21.96 | 0.00 | 2.57 |
2644 | 11333 | 6.044046 | TCTTGTTTAATGGCATGCATGATTC | 58.956 | 36.000 | 30.64 | 17.68 | 0.00 | 2.52 |
2645 | 11334 | 4.361420 | TGTTTAATGGCATGCATGATTCG | 58.639 | 39.130 | 30.64 | 3.47 | 0.00 | 3.34 |
2646 | 11335 | 4.142204 | TGTTTAATGGCATGCATGATTCGT | 60.142 | 37.500 | 30.64 | 15.90 | 0.00 | 3.85 |
2647 | 11336 | 5.067023 | TGTTTAATGGCATGCATGATTCGTA | 59.933 | 36.000 | 30.64 | 11.49 | 0.00 | 3.43 |
2648 | 11337 | 3.909776 | AATGGCATGCATGATTCGTAG | 57.090 | 42.857 | 30.64 | 1.01 | 0.00 | 3.51 |
2649 | 11338 | 2.330440 | TGGCATGCATGATTCGTAGT | 57.670 | 45.000 | 30.64 | 0.00 | 0.00 | 2.73 |
2650 | 11339 | 3.467374 | TGGCATGCATGATTCGTAGTA | 57.533 | 42.857 | 30.64 | 1.95 | 0.00 | 1.82 |
2651 | 11340 | 3.392882 | TGGCATGCATGATTCGTAGTAG | 58.607 | 45.455 | 30.64 | 0.00 | 0.00 | 2.57 |
2654 | 11343 | 4.623167 | GGCATGCATGATTCGTAGTAGTAG | 59.377 | 45.833 | 30.64 | 0.00 | 0.00 | 2.57 |
2658 | 11347 | 7.008719 | GCATGCATGATTCGTAGTAGTAGTATG | 59.991 | 40.741 | 30.64 | 0.00 | 0.00 | 2.39 |
2664 | 11353 | 7.415229 | TGATTCGTAGTAGTAGTATGTGCAAG | 58.585 | 38.462 | 0.00 | 0.00 | 0.00 | 4.01 |
2672 | 11361 | 4.433615 | AGTAGTATGTGCAAGATTGGTCG | 58.566 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
2673 | 11362 | 2.632377 | AGTATGTGCAAGATTGGTCGG | 58.368 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
2694 | 11383 | 1.856597 | CTGCTCTGTTTTGCTGCAAAC | 59.143 | 47.619 | 25.99 | 20.00 | 32.79 | 2.93 |
2716 | 11405 | 5.938322 | ACGGTGTTGCATGAAACTAATTAG | 58.062 | 37.500 | 17.58 | 11.05 | 0.00 | 1.73 |
2740 | 11438 | 8.025243 | AGAATGTTGTCAATGAATCAATTTGC | 57.975 | 30.769 | 0.00 | 0.00 | 0.00 | 3.68 |
2960 | 11667 | 2.202987 | GTGGCTCTCCATCTGCGG | 60.203 | 66.667 | 0.00 | 0.00 | 45.62 | 5.69 |
3306 | 12013 | 1.303317 | GCCCTTCTTCGGCAAGGAA | 60.303 | 57.895 | 8.93 | 0.00 | 46.27 | 3.36 |
3543 | 12373 | 1.267121 | GCCACTTCCTCTACCTCACA | 58.733 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3544 | 12374 | 1.066787 | GCCACTTCCTCTACCTCACAC | 60.067 | 57.143 | 0.00 | 0.00 | 0.00 | 3.82 |
3598 | 12436 | 3.135348 | TCCATCTTTAGGCCAGTCTCATG | 59.865 | 47.826 | 5.01 | 0.00 | 0.00 | 3.07 |
3599 | 12437 | 2.698855 | TCTTTAGGCCAGTCTCATGC | 57.301 | 50.000 | 5.01 | 0.00 | 0.00 | 4.06 |
3602 | 12440 | 2.627515 | TTAGGCCAGTCTCATGCATC | 57.372 | 50.000 | 5.01 | 0.00 | 0.00 | 3.91 |
3603 | 12441 | 1.499368 | TAGGCCAGTCTCATGCATCA | 58.501 | 50.000 | 5.01 | 0.00 | 0.00 | 3.07 |
3606 | 12444 | 1.015109 | GCCAGTCTCATGCATCAGTG | 58.985 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3635 | 12473 | 5.305585 | TCCACCTTGAACTGTAAAGATGAC | 58.694 | 41.667 | 5.08 | 0.00 | 0.00 | 3.06 |
3637 | 12475 | 5.049405 | CCACCTTGAACTGTAAAGATGACAC | 60.049 | 44.000 | 5.08 | 0.00 | 0.00 | 3.67 |
3641 | 12479 | 4.065088 | TGAACTGTAAAGATGACACCTGC | 58.935 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
3644 | 12482 | 3.005554 | CTGTAAAGATGACACCTGCCTG | 58.994 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3646 | 12484 | 1.901591 | AAAGATGACACCTGCCTGTG | 58.098 | 50.000 | 1.48 | 1.48 | 42.05 | 3.66 |
3649 | 12487 | 1.160137 | GATGACACCTGCCTGTGAAC | 58.840 | 55.000 | 9.44 | 4.39 | 39.57 | 3.18 |
3658 | 12496 | 3.642848 | ACCTGCCTGTGAACAAAATGAAT | 59.357 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
3763 | 13519 | 3.195698 | GTGCGGCCGGTGAAGATC | 61.196 | 66.667 | 29.38 | 7.83 | 0.00 | 2.75 |
3891 | 13653 | 0.251916 | TCGCCCTTCCAATGGTACTG | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3892 | 13654 | 1.376609 | CGCCCTTCCAATGGTACTGC | 61.377 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
3894 | 13656 | 1.211949 | GCCCTTCCAATGGTACTGCTA | 59.788 | 52.381 | 0.00 | 0.00 | 0.00 | 3.49 |
3900 | 13662 | 5.066505 | CCTTCCAATGGTACTGCTAATTCAC | 59.933 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3901 | 13663 | 5.435686 | TCCAATGGTACTGCTAATTCACT | 57.564 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3902 | 13664 | 6.553953 | TCCAATGGTACTGCTAATTCACTA | 57.446 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
3903 | 13665 | 6.346096 | TCCAATGGTACTGCTAATTCACTAC | 58.654 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
3904 | 13666 | 6.156256 | TCCAATGGTACTGCTAATTCACTACT | 59.844 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
3907 | 13669 | 4.404715 | TGGTACTGCTAATTCACTACTCCC | 59.595 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3908 | 13670 | 4.650131 | GGTACTGCTAATTCACTACTCCCT | 59.350 | 45.833 | 0.00 | 0.00 | 0.00 | 4.20 |
3911 | 13673 | 2.693591 | TGCTAATTCACTACTCCCTCCG | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3912 | 13674 | 2.694109 | GCTAATTCACTACTCCCTCCGT | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
3913 | 13675 | 3.243468 | GCTAATTCACTACTCCCTCCGTC | 60.243 | 52.174 | 0.00 | 0.00 | 0.00 | 4.79 |
3917 | 13679 | 1.378250 | ACTACTCCCTCCGTCCACG | 60.378 | 63.158 | 0.00 | 0.00 | 39.44 | 4.94 |
3918 | 13680 | 1.077930 | CTACTCCCTCCGTCCACGA | 60.078 | 63.158 | 0.00 | 0.00 | 43.02 | 4.35 |
3919 | 13681 | 0.679002 | CTACTCCCTCCGTCCACGAA | 60.679 | 60.000 | 0.00 | 0.00 | 43.02 | 3.85 |
3921 | 13683 | 0.033796 | ACTCCCTCCGTCCACGAATA | 60.034 | 55.000 | 0.00 | 0.00 | 43.02 | 1.75 |
3922 | 13684 | 1.108776 | CTCCCTCCGTCCACGAATAA | 58.891 | 55.000 | 0.00 | 0.00 | 43.02 | 1.40 |
3923 | 13685 | 1.067212 | CTCCCTCCGTCCACGAATAAG | 59.933 | 57.143 | 0.00 | 0.00 | 43.02 | 1.73 |
3925 | 13687 | 1.470979 | CCCTCCGTCCACGAATAAGTG | 60.471 | 57.143 | 0.00 | 0.00 | 43.02 | 3.16 |
3926 | 13688 | 1.203994 | CCTCCGTCCACGAATAAGTGT | 59.796 | 52.381 | 0.00 | 0.00 | 43.02 | 3.55 |
3928 | 13690 | 3.432782 | CTCCGTCCACGAATAAGTGTAC | 58.567 | 50.000 | 0.00 | 0.00 | 43.02 | 2.90 |
3930 | 13692 | 3.507233 | TCCGTCCACGAATAAGTGTACTT | 59.493 | 43.478 | 0.00 | 2.51 | 43.02 | 2.24 |
3932 | 13694 | 4.380233 | CCGTCCACGAATAAGTGTACTTCT | 60.380 | 45.833 | 0.00 | 0.00 | 43.02 | 2.85 |
3933 | 13695 | 5.163723 | CCGTCCACGAATAAGTGTACTTCTA | 60.164 | 44.000 | 0.00 | 0.00 | 43.02 | 2.10 |
3934 | 13696 | 5.964168 | CGTCCACGAATAAGTGTACTTCTAG | 59.036 | 44.000 | 0.00 | 0.00 | 43.02 | 2.43 |
3935 | 13697 | 5.742926 | GTCCACGAATAAGTGTACTTCTAGC | 59.257 | 44.000 | 0.00 | 0.00 | 40.33 | 3.42 |
3938 | 13700 | 6.812160 | CCACGAATAAGTGTACTTCTAGCTTT | 59.188 | 38.462 | 0.00 | 0.00 | 40.33 | 3.51 |
3943 | 13705 | 8.549338 | AATAAGTGTACTTCTAGCTTTTGTCC | 57.451 | 34.615 | 0.00 | 0.00 | 37.40 | 4.02 |
3944 | 13706 | 5.810080 | AGTGTACTTCTAGCTTTTGTCCT | 57.190 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
3948 | 13710 | 5.778750 | TGTACTTCTAGCTTTTGTCCTAGGT | 59.221 | 40.000 | 9.08 | 0.00 | 33.50 | 3.08 |
3950 | 13712 | 4.838986 | ACTTCTAGCTTTTGTCCTAGGTCA | 59.161 | 41.667 | 9.08 | 6.65 | 33.50 | 4.02 |
3951 | 13713 | 5.307196 | ACTTCTAGCTTTTGTCCTAGGTCAA | 59.693 | 40.000 | 16.29 | 16.29 | 33.50 | 3.18 |
3952 | 13714 | 5.818678 | TCTAGCTTTTGTCCTAGGTCAAA | 57.181 | 39.130 | 24.62 | 24.62 | 33.50 | 2.69 |
3954 | 13716 | 6.779860 | TCTAGCTTTTGTCCTAGGTCAAAAT | 58.220 | 36.000 | 32.91 | 25.36 | 40.32 | 1.82 |
3955 | 13717 | 7.231467 | TCTAGCTTTTGTCCTAGGTCAAAATT | 58.769 | 34.615 | 32.91 | 27.15 | 40.32 | 1.82 |
3960 | 13722 | 7.494298 | GCTTTTGTCCTAGGTCAAAATTTCAAA | 59.506 | 33.333 | 32.91 | 18.04 | 40.32 | 2.69 |
3961 | 13723 | 9.377312 | CTTTTGTCCTAGGTCAAAATTTCAAAA | 57.623 | 29.630 | 32.91 | 21.32 | 40.32 | 2.44 |
3962 | 13724 | 8.710835 | TTTGTCCTAGGTCAAAATTTCAAAAC | 57.289 | 30.769 | 25.74 | 6.19 | 32.21 | 2.43 |
3963 | 13725 | 7.654022 | TGTCCTAGGTCAAAATTTCAAAACT | 57.346 | 32.000 | 9.08 | 0.00 | 0.00 | 2.66 |
3964 | 13726 | 8.073467 | TGTCCTAGGTCAAAATTTCAAAACTT | 57.927 | 30.769 | 9.08 | 0.00 | 0.00 | 2.66 |
3965 | 13727 | 8.536175 | TGTCCTAGGTCAAAATTTCAAAACTTT | 58.464 | 29.630 | 9.08 | 0.00 | 0.00 | 2.66 |
3966 | 13728 | 8.817100 | GTCCTAGGTCAAAATTTCAAAACTTTG | 58.183 | 33.333 | 9.08 | 3.65 | 39.48 | 2.77 |
3967 | 13729 | 8.754080 | TCCTAGGTCAAAATTTCAAAACTTTGA | 58.246 | 29.630 | 9.08 | 7.73 | 44.78 | 2.69 |
4000 | 13762 | 6.889019 | AAAGCTAGAAGTACACTTATTCGC | 57.111 | 37.500 | 0.00 | 0.00 | 36.11 | 4.70 |
4001 | 13763 | 4.599047 | AGCTAGAAGTACACTTATTCGCG | 58.401 | 43.478 | 0.00 | 0.00 | 36.11 | 5.87 |
4002 | 13764 | 3.729716 | GCTAGAAGTACACTTATTCGCGG | 59.270 | 47.826 | 6.13 | 0.00 | 36.11 | 6.46 |
4003 | 13765 | 4.497006 | GCTAGAAGTACACTTATTCGCGGA | 60.497 | 45.833 | 6.13 | 0.00 | 36.11 | 5.54 |
4004 | 13766 | 3.767278 | AGAAGTACACTTATTCGCGGAC | 58.233 | 45.455 | 6.13 | 0.00 | 36.11 | 4.79 |
4005 | 13767 | 2.184385 | AGTACACTTATTCGCGGACG | 57.816 | 50.000 | 6.13 | 0.00 | 42.01 | 4.79 |
4006 | 13768 | 1.194495 | GTACACTTATTCGCGGACGG | 58.806 | 55.000 | 6.13 | 0.00 | 40.63 | 4.79 |
4007 | 13769 | 1.093972 | TACACTTATTCGCGGACGGA | 58.906 | 50.000 | 6.13 | 0.00 | 40.63 | 4.69 |
4008 | 13770 | 0.179145 | ACACTTATTCGCGGACGGAG | 60.179 | 55.000 | 6.13 | 0.00 | 40.63 | 4.63 |
4009 | 13771 | 0.870307 | CACTTATTCGCGGACGGAGG | 60.870 | 60.000 | 6.13 | 0.00 | 40.63 | 4.30 |
4010 | 13772 | 1.299926 | CTTATTCGCGGACGGAGGG | 60.300 | 63.158 | 6.13 | 0.00 | 40.63 | 4.30 |
4011 | 13773 | 1.731433 | CTTATTCGCGGACGGAGGGA | 61.731 | 60.000 | 6.13 | 0.00 | 40.63 | 4.20 |
4012 | 13774 | 1.731433 | TTATTCGCGGACGGAGGGAG | 61.731 | 60.000 | 6.13 | 0.00 | 40.63 | 4.30 |
4013 | 13775 | 2.898920 | TATTCGCGGACGGAGGGAGT | 62.899 | 60.000 | 6.13 | 0.00 | 40.63 | 3.85 |
4014 | 13776 | 2.898920 | ATTCGCGGACGGAGGGAGTA | 62.899 | 60.000 | 6.13 | 0.00 | 40.63 | 2.59 |
4015 | 13777 | 2.898920 | TTCGCGGACGGAGGGAGTAT | 62.899 | 60.000 | 6.13 | 0.00 | 40.63 | 2.12 |
4016 | 13778 | 2.728817 | GCGGACGGAGGGAGTATG | 59.271 | 66.667 | 0.00 | 0.00 | 0.00 | 2.39 |
4017 | 13779 | 2.125961 | GCGGACGGAGGGAGTATGT | 61.126 | 63.158 | 0.00 | 0.00 | 0.00 | 2.29 |
4018 | 13780 | 0.820891 | GCGGACGGAGGGAGTATGTA | 60.821 | 60.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4019 | 13781 | 1.236628 | CGGACGGAGGGAGTATGTAG | 58.763 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4020 | 13782 | 0.960286 | GGACGGAGGGAGTATGTAGC | 59.040 | 60.000 | 0.00 | 0.00 | 0.00 | 3.58 |
4066 | 13828 | 2.838736 | ACCATCATCATGAAGGTACGC | 58.161 | 47.619 | 13.05 | 0.00 | 45.55 | 4.42 |
4314 | 14318 | 0.675837 | GAGGTACGGCCCCTTGTTTC | 60.676 | 60.000 | 0.00 | 0.00 | 38.26 | 2.78 |
4327 | 14331 | 2.548920 | CCTTGTTTCTTCTGCTCCGTCT | 60.549 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4328 | 14332 | 2.910688 | TGTTTCTTCTGCTCCGTCTT | 57.089 | 45.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4329 | 14333 | 2.755650 | TGTTTCTTCTGCTCCGTCTTC | 58.244 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
4330 | 14334 | 2.365617 | TGTTTCTTCTGCTCCGTCTTCT | 59.634 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
4331 | 14335 | 2.732412 | TTCTTCTGCTCCGTCTTCTG | 57.268 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4332 | 14336 | 0.244994 | TCTTCTGCTCCGTCTTCTGC | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4333 | 14337 | 0.246086 | CTTCTGCTCCGTCTTCTGCT | 59.754 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
4334 | 14338 | 0.244994 | TTCTGCTCCGTCTTCTGCTC | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4335 | 14339 | 1.153667 | CTGCTCCGTCTTCTGCTCC | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
4382 | 14386 | 2.125310 | TTCTATGTGCGGTGCGGG | 60.125 | 61.111 | 0.00 | 0.00 | 0.00 | 6.13 |
4383 | 14387 | 2.949909 | TTCTATGTGCGGTGCGGGT | 61.950 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
4406 | 14426 | 3.797353 | TCCAATCTGGCCGGCCTC | 61.797 | 66.667 | 43.34 | 21.51 | 37.47 | 4.70 |
4408 | 14428 | 2.515523 | CAATCTGGCCGGCCTCTG | 60.516 | 66.667 | 43.34 | 31.52 | 36.94 | 3.35 |
4462 | 14569 | 2.746277 | ATGGCCACGAACGCTTCC | 60.746 | 61.111 | 8.16 | 0.00 | 0.00 | 3.46 |
4507 | 14628 | 1.997606 | CTCCGTACGGATTGTTCCAAC | 59.002 | 52.381 | 35.58 | 0.00 | 44.24 | 3.77 |
4569 | 14690 | 3.585862 | TGGAAGAAATCTGTACGCACTC | 58.414 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
4570 | 14691 | 3.258372 | TGGAAGAAATCTGTACGCACTCT | 59.742 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
4576 | 14697 | 7.336161 | AGAAATCTGTACGCACTCTAGTATT | 57.664 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4577 | 14698 | 8.447924 | AGAAATCTGTACGCACTCTAGTATTA | 57.552 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
4578 | 14699 | 9.069082 | AGAAATCTGTACGCACTCTAGTATTAT | 57.931 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
4579 | 14700 | 9.119329 | GAAATCTGTACGCACTCTAGTATTATG | 57.881 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
4587 | 14721 | 6.204075 | GCACTCTAGTATTATGCGTCTTTG | 57.796 | 41.667 | 0.00 | 0.00 | 0.00 | 2.77 |
4598 | 14732 | 4.338327 | GTCTTTGGCACGAGACGT | 57.662 | 55.556 | 12.72 | 0.00 | 42.36 | 4.34 |
4627 | 14761 | 0.249398 | GCCGCCTCCTCTGACTTTTA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 1.52 |
4671 | 14807 | 2.285827 | AAATCGGTCAGAAGAGCTCG | 57.714 | 50.000 | 8.37 | 0.00 | 40.07 | 5.03 |
4684 | 14820 | 0.681564 | GAGCTCGGAACAGAGGAGGA | 60.682 | 60.000 | 0.00 | 0.00 | 38.63 | 3.71 |
4685 | 14821 | 0.251832 | AGCTCGGAACAGAGGAGGAA | 60.252 | 55.000 | 4.42 | 0.00 | 38.63 | 3.36 |
4686 | 14822 | 0.608640 | GCTCGGAACAGAGGAGGAAA | 59.391 | 55.000 | 4.42 | 0.00 | 38.63 | 3.13 |
4687 | 14823 | 1.208293 | GCTCGGAACAGAGGAGGAAAT | 59.792 | 52.381 | 4.42 | 0.00 | 38.63 | 2.17 |
4688 | 14824 | 2.355209 | GCTCGGAACAGAGGAGGAAATT | 60.355 | 50.000 | 4.42 | 0.00 | 38.63 | 1.82 |
4689 | 14825 | 3.870299 | GCTCGGAACAGAGGAGGAAATTT | 60.870 | 47.826 | 0.00 | 0.00 | 38.63 | 1.82 |
4718 | 14854 | 2.565834 | GCACTGACTAACCAAGGACCTA | 59.434 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
4720 | 14856 | 4.323562 | GCACTGACTAACCAAGGACCTAAT | 60.324 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
4721 | 14857 | 5.105064 | GCACTGACTAACCAAGGACCTAATA | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 0.98 |
4723 | 14859 | 6.817140 | CACTGACTAACCAAGGACCTAATAAC | 59.183 | 42.308 | 0.00 | 0.00 | 0.00 | 1.89 |
4724 | 14860 | 6.729569 | ACTGACTAACCAAGGACCTAATAACT | 59.270 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
4726 | 14862 | 8.669055 | TGACTAACCAAGGACCTAATAACTAA | 57.331 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
4772 | 15131 | 8.934507 | ACTATGATGCTTCTACTGTTTCTTAC | 57.065 | 34.615 | 0.88 | 0.00 | 0.00 | 2.34 |
4776 | 15135 | 8.123639 | TGATGCTTCTACTGTTTCTTACTAGT | 57.876 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
4777 | 15136 | 8.029522 | TGATGCTTCTACTGTTTCTTACTAGTG | 58.970 | 37.037 | 5.39 | 0.00 | 0.00 | 2.74 |
4781 | 15140 | 6.323203 | TCTACTGTTTCTTACTAGTGCGTT | 57.677 | 37.500 | 5.39 | 0.00 | 0.00 | 4.84 |
4800 | 15159 | 4.201783 | GCGTTAAACATCCACATACAGTCC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
4868 | 15254 | 7.160547 | TGATCTTTGTCATTGTTGTGCATAT | 57.839 | 32.000 | 0.00 | 0.00 | 0.00 | 1.78 |
4869 | 15255 | 8.278729 | TGATCTTTGTCATTGTTGTGCATATA | 57.721 | 30.769 | 0.00 | 0.00 | 0.00 | 0.86 |
4899 | 15285 | 4.142687 | CCATATTATGGCCGATTCCGTTTC | 60.143 | 45.833 | 9.74 | 0.00 | 44.70 | 2.78 |
5023 | 16207 | 0.889186 | ACACATCCGGCCACTTGTTC | 60.889 | 55.000 | 2.24 | 0.00 | 0.00 | 3.18 |
5101 | 17474 | 6.642950 | CCGGTTGTTAAATCATTGCTTAAACA | 59.357 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
5166 | 17675 | 5.064452 | GTGTCTTGATCATGTCAATCAGTCC | 59.936 | 44.000 | 9.49 | 0.00 | 45.36 | 3.85 |
5222 | 17747 | 8.677148 | AGTAGTCTTACAAAATGTGATTGTGT | 57.323 | 30.769 | 2.37 | 0.00 | 42.99 | 3.72 |
5373 | 17898 | 2.503331 | TCATCAACAACATGAAGCGGT | 58.497 | 42.857 | 0.00 | 0.00 | 32.06 | 5.68 |
5672 | 18200 | 1.374947 | CACCCGTGTCAAGACCCAT | 59.625 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
5755 | 18283 | 3.304928 | CGTGTCGGTAAGTACCAAACTCT | 60.305 | 47.826 | 8.21 | 0.00 | 46.80 | 3.24 |
5771 | 18299 | 4.859629 | AACTCTCTTTGTTTCACACGTC | 57.140 | 40.909 | 0.00 | 0.00 | 0.00 | 4.34 |
5781 | 18309 | 4.443621 | TGTTTCACACGTCCATACTCAAA | 58.556 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
5791 | 18319 | 5.410439 | ACGTCCATACTCAAATTGTTGGTAC | 59.590 | 40.000 | 0.00 | 0.00 | 35.29 | 3.34 |
5797 | 18325 | 8.188139 | CCATACTCAAATTGTTGGTACCATAAC | 58.812 | 37.037 | 17.17 | 12.75 | 35.29 | 1.89 |
5798 | 18326 | 8.956426 | CATACTCAAATTGTTGGTACCATAACT | 58.044 | 33.333 | 17.17 | 1.21 | 35.29 | 2.24 |
5800 | 18328 | 8.561738 | ACTCAAATTGTTGGTACCATAACTAG | 57.438 | 34.615 | 17.17 | 11.41 | 35.29 | 2.57 |
5803 | 18331 | 8.322828 | TCAAATTGTTGGTACCATAACTAGCTA | 58.677 | 33.333 | 17.17 | 0.00 | 35.29 | 3.32 |
5855 | 18397 | 4.929808 | TCATGCTTTCTCGGTAGTTTCTTC | 59.070 | 41.667 | 0.00 | 0.00 | 0.00 | 2.87 |
5870 | 18412 | 0.943835 | TCTTCACACGTGCATGGTCG | 60.944 | 55.000 | 17.22 | 1.34 | 0.00 | 4.79 |
5882 | 18424 | 1.466950 | GCATGGTCGAAATTTGGTCGA | 59.533 | 47.619 | 0.00 | 0.00 | 44.82 | 4.20 |
5981 | 18532 | 2.042569 | TCCTGGTGCTAGACTGAACCTA | 59.957 | 50.000 | 0.00 | 0.00 | 36.59 | 3.08 |
5983 | 18534 | 3.118956 | CCTGGTGCTAGACTGAACCTAAG | 60.119 | 52.174 | 0.00 | 0.00 | 36.59 | 2.18 |
5992 | 18544 | 5.502153 | AGACTGAACCTAAGTGTATAGCG | 57.498 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
6009 | 18561 | 5.746990 | ATAGCGATGGCCTAACTTTCTAT | 57.253 | 39.130 | 3.32 | 0.00 | 41.24 | 1.98 |
6011 | 18563 | 2.224314 | GCGATGGCCTAACTTTCTATGC | 59.776 | 50.000 | 3.32 | 0.00 | 0.00 | 3.14 |
6013 | 18565 | 3.876914 | CGATGGCCTAACTTTCTATGCAA | 59.123 | 43.478 | 3.32 | 0.00 | 0.00 | 4.08 |
6061 | 18618 | 2.159099 | TGTCAGGATCGAAGGTGTATGC | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.14 |
6172 | 18730 | 3.193267 | TGCTGAGCACATAAAACCATTCC | 59.807 | 43.478 | 1.40 | 0.00 | 31.71 | 3.01 |
6366 | 18933 | 9.983024 | TTCCTCACCATAAATTAATTAACCTCA | 57.017 | 29.630 | 0.01 | 0.00 | 0.00 | 3.86 |
6367 | 18934 | 9.627123 | TCCTCACCATAAATTAATTAACCTCAG | 57.373 | 33.333 | 0.01 | 0.00 | 0.00 | 3.35 |
6368 | 18935 | 9.408648 | CCTCACCATAAATTAATTAACCTCAGT | 57.591 | 33.333 | 0.01 | 0.00 | 0.00 | 3.41 |
6372 | 18939 | 9.914834 | ACCATAAATTAATTAACCTCAGTAGCA | 57.085 | 29.630 | 0.01 | 0.00 | 0.00 | 3.49 |
6431 | 18998 | 1.690893 | TGCTCATCTACTCCCTGATGC | 59.309 | 52.381 | 0.00 | 0.00 | 39.69 | 3.91 |
6474 | 19041 | 7.331687 | GTCCATAAAATTTTGCATGCTTGTAGT | 59.668 | 33.333 | 20.33 | 1.49 | 0.00 | 2.73 |
6493 | 19060 | 1.300971 | TGCACTTGAGCATCTTCGGC | 61.301 | 55.000 | 0.00 | 0.00 | 40.11 | 5.54 |
6558 | 19125 | 0.400594 | GGGTGTAGACAAGCTTGGGT | 59.599 | 55.000 | 29.18 | 18.08 | 0.00 | 4.51 |
6737 | 19304 | 2.628290 | GGGTGAGGAGAAAGGAGAGGAT | 60.628 | 54.545 | 0.00 | 0.00 | 0.00 | 3.24 |
6819 | 19387 | 5.398603 | AACTTCGTGAGAGAATGAGATGT | 57.601 | 39.130 | 0.00 | 0.00 | 43.69 | 3.06 |
6862 | 19430 | 7.034397 | AGATGACATATCAATGTGATAGAGCG | 58.966 | 38.462 | 4.43 | 0.00 | 46.49 | 5.03 |
6925 | 19493 | 9.281371 | AGAATTACATGATCGATCAATCAACAT | 57.719 | 29.630 | 30.41 | 15.18 | 40.69 | 2.71 |
6931 | 19499 | 8.843262 | ACATGATCGATCAATCAACATTGTTAT | 58.157 | 29.630 | 30.41 | 7.34 | 40.47 | 1.89 |
7076 | 19644 | 4.772046 | TTTCTCGAGAAAGACAAACACG | 57.228 | 40.909 | 31.62 | 0.00 | 38.94 | 4.49 |
7116 | 19684 | 9.067986 | ACAAGGAGAATTTTTAACTTCTGTAGG | 57.932 | 33.333 | 0.49 | 0.00 | 31.99 | 3.18 |
7121 | 19689 | 8.465273 | AGAATTTTTAACTTCTGTAGGCAACT | 57.535 | 30.769 | 0.00 | 0.00 | 39.48 | 3.16 |
7173 | 19744 | 8.879759 | CGGAAAGTGTGTTAATTCAGTACATAT | 58.120 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
7248 | 19822 | 7.072177 | TGTGTTGATTTAGTACATAGCAAGC | 57.928 | 36.000 | 0.00 | 0.00 | 0.00 | 4.01 |
7415 | 19997 | 9.865321 | CAACTTTCTTAATCAACATCCATGATT | 57.135 | 29.630 | 6.93 | 6.93 | 46.37 | 2.57 |
7490 | 20158 | 4.681025 | CAGTGCGAATTTTGTGCTAATTGT | 59.319 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
7590 | 20281 | 3.056322 | AGCAAATGTTGGAAGCAGGAATC | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
7606 | 20297 | 3.265479 | AGGAATCCCTTCAGAGTTCCAAG | 59.735 | 47.826 | 0.00 | 0.00 | 40.78 | 3.61 |
7712 | 20465 | 4.778143 | GCGTGGTTCCATCGGCCT | 62.778 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
7713 | 20466 | 2.897207 | CGTGGTTCCATCGGCCTA | 59.103 | 61.111 | 0.00 | 0.00 | 0.00 | 3.93 |
7714 | 20467 | 1.219664 | CGTGGTTCCATCGGCCTAA | 59.780 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
7715 | 20468 | 1.087771 | CGTGGTTCCATCGGCCTAAC | 61.088 | 60.000 | 0.00 | 0.00 | 0.00 | 2.34 |
7716 | 20469 | 0.035820 | GTGGTTCCATCGGCCTAACA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
7717 | 20470 | 0.251916 | TGGTTCCATCGGCCTAACAG | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7981 | 21303 | 1.068588 | TCATCGCCATCCCTAAACTCG | 59.931 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
8105 | 21476 | 0.814010 | AAACAACGCAGCTCCGACTT | 60.814 | 50.000 | 2.80 | 0.00 | 0.00 | 3.01 |
8116 | 21487 | 2.132762 | GCTCCGACTTTGACGAAGAAA | 58.867 | 47.619 | 9.54 | 0.00 | 38.77 | 2.52 |
8117 | 21488 | 2.155924 | GCTCCGACTTTGACGAAGAAAG | 59.844 | 50.000 | 9.54 | 0.00 | 38.77 | 2.62 |
8118 | 21489 | 3.381949 | CTCCGACTTTGACGAAGAAAGT | 58.618 | 45.455 | 9.54 | 9.79 | 44.51 | 2.66 |
8119 | 21490 | 4.543692 | CTCCGACTTTGACGAAGAAAGTA | 58.456 | 43.478 | 9.54 | 0.00 | 42.42 | 2.24 |
8196 | 21568 | 2.163818 | ACCAGTCATTGTACACCACG | 57.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
8199 | 21571 | 1.001520 | CAGTCATTGTACACCACGGGA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
8204 | 21576 | 2.924101 | GTACACCACGGGACCCCA | 60.924 | 66.667 | 4.46 | 0.00 | 35.37 | 4.96 |
8225 | 21597 | 0.792640 | CGCAACAGCTTCGACTTCAT | 59.207 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
8245 | 21618 | 1.896220 | AGCAGCAAACAAATCGAGGA | 58.104 | 45.000 | 0.00 | 0.00 | 0.00 | 3.71 |
8246 | 21619 | 1.537202 | AGCAGCAAACAAATCGAGGAC | 59.463 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
8303 | 21676 | 3.195002 | CATTGCCACGTCGCCGAT | 61.195 | 61.111 | 1.78 | 0.00 | 37.88 | 4.18 |
8304 | 21677 | 1.880796 | CATTGCCACGTCGCCGATA | 60.881 | 57.895 | 1.78 | 0.00 | 37.88 | 2.92 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
9 | 10 | 1.261480 | TTATGCCACGCCAATGGTTT | 58.739 | 45.000 | 0.00 | 0.00 | 42.28 | 3.27 |
11 | 12 | 1.032014 | GATTATGCCACGCCAATGGT | 58.968 | 50.000 | 0.00 | 0.00 | 42.28 | 3.55 |
12 | 13 | 0.314935 | GGATTATGCCACGCCAATGG | 59.685 | 55.000 | 0.00 | 0.00 | 43.26 | 3.16 |
13 | 14 | 0.040157 | CGGATTATGCCACGCCAATG | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
14 | 15 | 0.465460 | ACGGATTATGCCACGCCAAT | 60.465 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
15 | 16 | 1.078072 | ACGGATTATGCCACGCCAA | 60.078 | 52.632 | 0.00 | 0.00 | 0.00 | 4.52 |
16 | 17 | 1.817520 | CACGGATTATGCCACGCCA | 60.818 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
17 | 18 | 1.522806 | TCACGGATTATGCCACGCC | 60.523 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
18 | 19 | 1.641677 | GTCACGGATTATGCCACGC | 59.358 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
19 | 20 | 0.804544 | ACGTCACGGATTATGCCACG | 60.805 | 55.000 | 0.35 | 0.00 | 32.87 | 4.94 |
20 | 21 | 1.365699 | AACGTCACGGATTATGCCAC | 58.634 | 50.000 | 0.35 | 0.00 | 0.00 | 5.01 |
21 | 22 | 2.004017 | GAAACGTCACGGATTATGCCA | 58.996 | 47.619 | 0.35 | 0.00 | 0.00 | 4.92 |
22 | 23 | 2.030457 | CAGAAACGTCACGGATTATGCC | 59.970 | 50.000 | 0.35 | 0.00 | 0.00 | 4.40 |
23 | 24 | 2.927477 | TCAGAAACGTCACGGATTATGC | 59.073 | 45.455 | 0.35 | 0.00 | 0.00 | 3.14 |
24 | 25 | 5.524511 | TTTCAGAAACGTCACGGATTATG | 57.475 | 39.130 | 0.35 | 4.16 | 0.00 | 1.90 |
25 | 26 | 5.467399 | TGTTTTCAGAAACGTCACGGATTAT | 59.533 | 36.000 | 0.35 | 0.00 | 46.44 | 1.28 |
26 | 27 | 4.809958 | TGTTTTCAGAAACGTCACGGATTA | 59.190 | 37.500 | 0.35 | 0.00 | 46.44 | 1.75 |
27 | 28 | 3.623960 | TGTTTTCAGAAACGTCACGGATT | 59.376 | 39.130 | 0.35 | 0.00 | 46.44 | 3.01 |
28 | 29 | 3.199677 | TGTTTTCAGAAACGTCACGGAT | 58.800 | 40.909 | 0.35 | 0.00 | 46.44 | 4.18 |
29 | 30 | 2.619147 | TGTTTTCAGAAACGTCACGGA | 58.381 | 42.857 | 0.35 | 0.00 | 46.44 | 4.69 |
41 | 42 | 5.105997 | GGGGATGATGAAACTCTGTTTTCAG | 60.106 | 44.000 | 11.09 | 0.00 | 46.12 | 3.02 |
42 | 43 | 4.766891 | GGGGATGATGAAACTCTGTTTTCA | 59.233 | 41.667 | 8.80 | 8.80 | 46.78 | 2.69 |
43 | 44 | 4.766891 | TGGGGATGATGAAACTCTGTTTTC | 59.233 | 41.667 | 0.00 | 0.00 | 36.23 | 2.29 |
44 | 45 | 4.524328 | GTGGGGATGATGAAACTCTGTTTT | 59.476 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
45 | 46 | 4.082125 | GTGGGGATGATGAAACTCTGTTT | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
46 | 47 | 3.562176 | GGTGGGGATGATGAAACTCTGTT | 60.562 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
47 | 48 | 2.025887 | GGTGGGGATGATGAAACTCTGT | 60.026 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
48 | 49 | 2.648059 | GGTGGGGATGATGAAACTCTG | 58.352 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
49 | 50 | 1.566231 | GGGTGGGGATGATGAAACTCT | 59.434 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
50 | 51 | 1.410224 | GGGGTGGGGATGATGAAACTC | 60.410 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
51 | 52 | 0.631212 | GGGGTGGGGATGATGAAACT | 59.369 | 55.000 | 0.00 | 0.00 | 0.00 | 2.66 |
52 | 53 | 0.334676 | TGGGGTGGGGATGATGAAAC | 59.665 | 55.000 | 0.00 | 0.00 | 0.00 | 2.78 |
53 | 54 | 1.063038 | CATGGGGTGGGGATGATGAAA | 60.063 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
54 | 55 | 0.557238 | CATGGGGTGGGGATGATGAA | 59.443 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
55 | 56 | 2.010412 | GCATGGGGTGGGGATGATGA | 62.010 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
56 | 57 | 1.532316 | GCATGGGGTGGGGATGATG | 60.532 | 63.158 | 0.00 | 0.00 | 0.00 | 3.07 |
57 | 58 | 1.373843 | ATGCATGGGGTGGGGATGAT | 61.374 | 55.000 | 0.00 | 0.00 | 0.00 | 2.45 |
58 | 59 | 2.013964 | ATGCATGGGGTGGGGATGA | 61.014 | 57.895 | 0.00 | 0.00 | 0.00 | 2.92 |
59 | 60 | 1.835267 | CATGCATGGGGTGGGGATG | 60.835 | 63.158 | 19.40 | 0.00 | 0.00 | 3.51 |
60 | 61 | 2.326974 | ACATGCATGGGGTGGGGAT | 61.327 | 57.895 | 29.41 | 3.16 | 0.00 | 3.85 |
61 | 62 | 2.946084 | ACATGCATGGGGTGGGGA | 60.946 | 61.111 | 29.41 | 0.00 | 0.00 | 4.81 |
62 | 63 | 2.760799 | CACATGCATGGGGTGGGG | 60.761 | 66.667 | 29.41 | 3.17 | 0.00 | 4.96 |
63 | 64 | 2.037687 | ACACATGCATGGGGTGGG | 59.962 | 61.111 | 31.51 | 9.57 | 36.87 | 4.61 |
64 | 65 | 1.186917 | AACACACATGCATGGGGTGG | 61.187 | 55.000 | 36.04 | 26.63 | 39.75 | 4.61 |
65 | 66 | 0.244450 | GAACACACATGCATGGGGTG | 59.756 | 55.000 | 33.83 | 33.83 | 40.62 | 4.61 |
66 | 67 | 0.899717 | GGAACACACATGCATGGGGT | 60.900 | 55.000 | 31.51 | 23.96 | 34.87 | 4.95 |
67 | 68 | 1.606885 | GGGAACACACATGCATGGGG | 61.607 | 60.000 | 31.51 | 23.33 | 34.87 | 4.96 |
68 | 69 | 0.899253 | TGGGAACACACATGCATGGG | 60.899 | 55.000 | 27.38 | 27.38 | 37.19 | 4.00 |
69 | 70 | 2.656049 | TGGGAACACACATGCATGG | 58.344 | 52.632 | 29.41 | 20.05 | 33.40 | 3.66 |
81 | 82 | 3.243569 | CGAGTGAGGATAGACATGGGAAC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 3.62 |
82 | 83 | 2.959030 | CGAGTGAGGATAGACATGGGAA | 59.041 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
83 | 84 | 2.091830 | ACGAGTGAGGATAGACATGGGA | 60.092 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
84 | 85 | 2.311463 | ACGAGTGAGGATAGACATGGG | 58.689 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
85 | 86 | 3.131223 | ACAACGAGTGAGGATAGACATGG | 59.869 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
86 | 87 | 4.377839 | ACAACGAGTGAGGATAGACATG | 57.622 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
87 | 88 | 6.525578 | TTAACAACGAGTGAGGATAGACAT | 57.474 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
88 | 89 | 5.970317 | TTAACAACGAGTGAGGATAGACA | 57.030 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
89 | 90 | 6.388278 | AGTTTAACAACGAGTGAGGATAGAC | 58.612 | 40.000 | 0.00 | 0.00 | 38.03 | 2.59 |
90 | 91 | 6.585695 | AGTTTAACAACGAGTGAGGATAGA | 57.414 | 37.500 | 0.00 | 0.00 | 38.03 | 1.98 |
91 | 92 | 7.435488 | CCATAGTTTAACAACGAGTGAGGATAG | 59.565 | 40.741 | 0.00 | 0.00 | 38.03 | 2.08 |
92 | 93 | 7.093640 | ACCATAGTTTAACAACGAGTGAGGATA | 60.094 | 37.037 | 0.00 | 0.00 | 38.03 | 2.59 |
93 | 94 | 6.106673 | CCATAGTTTAACAACGAGTGAGGAT | 58.893 | 40.000 | 0.00 | 0.00 | 38.03 | 3.24 |
94 | 95 | 5.011329 | ACCATAGTTTAACAACGAGTGAGGA | 59.989 | 40.000 | 0.00 | 0.00 | 38.03 | 3.71 |
95 | 96 | 5.235516 | ACCATAGTTTAACAACGAGTGAGG | 58.764 | 41.667 | 0.00 | 0.00 | 38.03 | 3.86 |
96 | 97 | 6.347402 | CCAACCATAGTTTAACAACGAGTGAG | 60.347 | 42.308 | 0.00 | 0.00 | 38.03 | 3.51 |
97 | 98 | 5.467399 | CCAACCATAGTTTAACAACGAGTGA | 59.533 | 40.000 | 0.00 | 0.00 | 38.03 | 3.41 |
98 | 99 | 5.237779 | ACCAACCATAGTTTAACAACGAGTG | 59.762 | 40.000 | 0.00 | 0.00 | 38.03 | 3.51 |
99 | 100 | 5.370679 | ACCAACCATAGTTTAACAACGAGT | 58.629 | 37.500 | 0.00 | 0.00 | 38.03 | 4.18 |
100 | 101 | 5.934935 | ACCAACCATAGTTTAACAACGAG | 57.065 | 39.130 | 0.00 | 0.00 | 38.03 | 4.18 |
101 | 102 | 5.505985 | GCAACCAACCATAGTTTAACAACGA | 60.506 | 40.000 | 0.00 | 0.00 | 38.03 | 3.85 |
102 | 103 | 4.677832 | GCAACCAACCATAGTTTAACAACG | 59.322 | 41.667 | 0.00 | 0.00 | 38.03 | 4.10 |
103 | 104 | 4.677832 | CGCAACCAACCATAGTTTAACAAC | 59.322 | 41.667 | 0.00 | 0.00 | 32.45 | 3.32 |
104 | 105 | 4.338682 | ACGCAACCAACCATAGTTTAACAA | 59.661 | 37.500 | 0.00 | 0.00 | 32.45 | 2.83 |
105 | 106 | 3.884091 | ACGCAACCAACCATAGTTTAACA | 59.116 | 39.130 | 0.00 | 0.00 | 32.45 | 2.41 |
106 | 107 | 4.214758 | AGACGCAACCAACCATAGTTTAAC | 59.785 | 41.667 | 0.00 | 0.00 | 32.45 | 2.01 |
107 | 108 | 4.391155 | AGACGCAACCAACCATAGTTTAA | 58.609 | 39.130 | 0.00 | 0.00 | 32.45 | 1.52 |
108 | 109 | 4.010667 | AGACGCAACCAACCATAGTTTA | 57.989 | 40.909 | 0.00 | 0.00 | 32.45 | 2.01 |
109 | 110 | 2.858745 | AGACGCAACCAACCATAGTTT | 58.141 | 42.857 | 0.00 | 0.00 | 32.45 | 2.66 |
110 | 111 | 2.552315 | CAAGACGCAACCAACCATAGTT | 59.448 | 45.455 | 0.00 | 0.00 | 36.33 | 2.24 |
111 | 112 | 2.151202 | CAAGACGCAACCAACCATAGT | 58.849 | 47.619 | 0.00 | 0.00 | 0.00 | 2.12 |
112 | 113 | 1.135689 | GCAAGACGCAACCAACCATAG | 60.136 | 52.381 | 0.00 | 0.00 | 41.79 | 2.23 |
113 | 114 | 0.878416 | GCAAGACGCAACCAACCATA | 59.122 | 50.000 | 0.00 | 0.00 | 41.79 | 2.74 |
114 | 115 | 0.823356 | AGCAAGACGCAACCAACCAT | 60.823 | 50.000 | 0.00 | 0.00 | 46.13 | 3.55 |
115 | 116 | 1.034838 | AAGCAAGACGCAACCAACCA | 61.035 | 50.000 | 0.00 | 0.00 | 46.13 | 3.67 |
116 | 117 | 0.317854 | GAAGCAAGACGCAACCAACC | 60.318 | 55.000 | 0.00 | 0.00 | 46.13 | 3.77 |
117 | 118 | 0.663153 | AGAAGCAAGACGCAACCAAC | 59.337 | 50.000 | 0.00 | 0.00 | 46.13 | 3.77 |
118 | 119 | 1.333619 | GAAGAAGCAAGACGCAACCAA | 59.666 | 47.619 | 0.00 | 0.00 | 46.13 | 3.67 |
124 | 125 | 1.195674 | GACAAGGAAGAAGCAAGACGC | 59.804 | 52.381 | 0.00 | 0.00 | 42.91 | 5.19 |
154 | 155 | 5.591099 | AGAAGAAGCAATTTCGCAAAAAGA | 58.409 | 33.333 | 0.00 | 0.00 | 40.86 | 2.52 |
155 | 156 | 5.689068 | AGAGAAGAAGCAATTTCGCAAAAAG | 59.311 | 36.000 | 0.00 | 0.00 | 40.86 | 2.27 |
156 | 157 | 5.459762 | CAGAGAAGAAGCAATTTCGCAAAAA | 59.540 | 36.000 | 0.00 | 0.00 | 40.86 | 1.94 |
157 | 158 | 4.977963 | CAGAGAAGAAGCAATTTCGCAAAA | 59.022 | 37.500 | 0.00 | 0.00 | 40.86 | 2.44 |
158 | 159 | 4.036734 | ACAGAGAAGAAGCAATTTCGCAAA | 59.963 | 37.500 | 0.00 | 0.00 | 40.86 | 3.68 |
178 | 179 | 4.341235 | TGACCGGGAAGTAAGATATGACAG | 59.659 | 45.833 | 6.32 | 0.00 | 0.00 | 3.51 |
188 | 189 | 3.056107 | CAGATCTGTTGACCGGGAAGTAA | 60.056 | 47.826 | 14.95 | 0.00 | 0.00 | 2.24 |
289 | 302 | 3.952323 | TGACTTATTCACCTAGACGGAGG | 59.048 | 47.826 | 0.00 | 0.00 | 42.89 | 4.30 |
291 | 304 | 5.220989 | CGAATGACTTATTCACCTAGACGGA | 60.221 | 44.000 | 0.00 | 0.00 | 44.42 | 4.69 |
292 | 305 | 4.976731 | CGAATGACTTATTCACCTAGACGG | 59.023 | 45.833 | 0.00 | 0.00 | 44.42 | 4.79 |
294 | 307 | 4.441415 | CGCGAATGACTTATTCACCTAGAC | 59.559 | 45.833 | 0.00 | 0.00 | 44.42 | 2.59 |
295 | 308 | 4.097437 | ACGCGAATGACTTATTCACCTAGA | 59.903 | 41.667 | 15.93 | 0.00 | 44.42 | 2.43 |
297 | 310 | 4.380841 | ACGCGAATGACTTATTCACCTA | 57.619 | 40.909 | 15.93 | 0.00 | 44.42 | 3.08 |
298 | 311 | 3.247006 | ACGCGAATGACTTATTCACCT | 57.753 | 42.857 | 15.93 | 0.00 | 44.42 | 4.00 |
299 | 312 | 4.110482 | ACTACGCGAATGACTTATTCACC | 58.890 | 43.478 | 15.93 | 0.00 | 44.42 | 4.02 |
300 | 313 | 5.515626 | AGAACTACGCGAATGACTTATTCAC | 59.484 | 40.000 | 15.93 | 0.00 | 44.42 | 3.18 |
301 | 314 | 5.647589 | AGAACTACGCGAATGACTTATTCA | 58.352 | 37.500 | 15.93 | 0.00 | 44.42 | 2.57 |
302 | 315 | 6.360148 | CCTAGAACTACGCGAATGACTTATTC | 59.640 | 42.308 | 15.93 | 3.24 | 41.46 | 1.75 |
303 | 316 | 6.183360 | ACCTAGAACTACGCGAATGACTTATT | 60.183 | 38.462 | 15.93 | 0.00 | 0.00 | 1.40 |
304 | 317 | 5.298777 | ACCTAGAACTACGCGAATGACTTAT | 59.701 | 40.000 | 15.93 | 0.00 | 0.00 | 1.73 |
305 | 318 | 4.637534 | ACCTAGAACTACGCGAATGACTTA | 59.362 | 41.667 | 15.93 | 0.00 | 0.00 | 2.24 |
306 | 319 | 3.442977 | ACCTAGAACTACGCGAATGACTT | 59.557 | 43.478 | 15.93 | 0.00 | 0.00 | 3.01 |
307 | 320 | 3.015327 | ACCTAGAACTACGCGAATGACT | 58.985 | 45.455 | 15.93 | 9.07 | 0.00 | 3.41 |
308 | 321 | 3.181503 | TGACCTAGAACTACGCGAATGAC | 60.182 | 47.826 | 15.93 | 0.66 | 0.00 | 3.06 |
309 | 322 | 3.011818 | TGACCTAGAACTACGCGAATGA | 58.988 | 45.455 | 15.93 | 0.00 | 0.00 | 2.57 |
310 | 323 | 3.416119 | TGACCTAGAACTACGCGAATG | 57.584 | 47.619 | 15.93 | 4.47 | 0.00 | 2.67 |
312 | 325 | 2.031314 | CGATGACCTAGAACTACGCGAA | 59.969 | 50.000 | 15.93 | 0.00 | 0.00 | 4.70 |
314 | 327 | 1.596260 | TCGATGACCTAGAACTACGCG | 59.404 | 52.381 | 3.53 | 3.53 | 0.00 | 6.01 |
315 | 328 | 3.900388 | ATCGATGACCTAGAACTACGC | 57.100 | 47.619 | 0.00 | 0.00 | 0.00 | 4.42 |
316 | 329 | 5.817988 | TCAAATCGATGACCTAGAACTACG | 58.182 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
317 | 330 | 5.688176 | GCTCAAATCGATGACCTAGAACTAC | 59.312 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
318 | 331 | 5.359860 | TGCTCAAATCGATGACCTAGAACTA | 59.640 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
319 | 332 | 4.160439 | TGCTCAAATCGATGACCTAGAACT | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
320 | 333 | 4.433615 | TGCTCAAATCGATGACCTAGAAC | 58.566 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
321 | 334 | 4.736126 | TGCTCAAATCGATGACCTAGAA | 57.264 | 40.909 | 0.00 | 0.00 | 0.00 | 2.10 |
322 | 335 | 4.736126 | TTGCTCAAATCGATGACCTAGA | 57.264 | 40.909 | 0.00 | 0.00 | 0.00 | 2.43 |
323 | 336 | 5.998454 | AATTGCTCAAATCGATGACCTAG | 57.002 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
324 | 337 | 7.857734 | TTTAATTGCTCAAATCGATGACCTA | 57.142 | 32.000 | 0.00 | 0.00 | 0.00 | 3.08 |
371 | 384 | 9.776158 | CATCCGTGTAGAAATCTAGTGATATAC | 57.224 | 37.037 | 0.00 | 0.00 | 31.70 | 1.47 |
374 | 387 | 7.818997 | ACATCCGTGTAGAAATCTAGTGATA | 57.181 | 36.000 | 0.00 | 0.00 | 36.63 | 2.15 |
375 | 388 | 6.716934 | ACATCCGTGTAGAAATCTAGTGAT | 57.283 | 37.500 | 0.00 | 0.00 | 36.63 | 3.06 |
434 | 447 | 9.931210 | GGTCGAGGATTTAACTATTTAAATGTG | 57.069 | 33.333 | 13.70 | 6.27 | 44.51 | 3.21 |
441 | 454 | 8.979534 | AGTTCTAGGTCGAGGATTTAACTATTT | 58.020 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
444 | 457 | 7.225538 | CGTAGTTCTAGGTCGAGGATTTAACTA | 59.774 | 40.741 | 0.00 | 0.00 | 0.00 | 2.24 |
445 | 458 | 6.038050 | CGTAGTTCTAGGTCGAGGATTTAACT | 59.962 | 42.308 | 0.00 | 0.00 | 0.00 | 2.24 |
446 | 459 | 6.197981 | CGTAGTTCTAGGTCGAGGATTTAAC | 58.802 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
447 | 460 | 5.220931 | GCGTAGTTCTAGGTCGAGGATTTAA | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 1.52 |
448 | 461 | 4.274459 | GCGTAGTTCTAGGTCGAGGATTTA | 59.726 | 45.833 | 0.00 | 0.00 | 0.00 | 1.40 |
449 | 462 | 3.066481 | GCGTAGTTCTAGGTCGAGGATTT | 59.934 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
450 | 463 | 2.617774 | GCGTAGTTCTAGGTCGAGGATT | 59.382 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
452 | 465 | 1.661341 | GCGTAGTTCTAGGTCGAGGA | 58.339 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
453 | 466 | 0.304098 | CGCGTAGTTCTAGGTCGAGG | 59.696 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
454 | 467 | 1.284657 | TCGCGTAGTTCTAGGTCGAG | 58.715 | 55.000 | 5.77 | 0.00 | 0.00 | 4.04 |
455 | 468 | 1.725641 | TTCGCGTAGTTCTAGGTCGA | 58.274 | 50.000 | 5.77 | 11.56 | 0.00 | 4.20 |
456 | 469 | 2.031314 | TCATTCGCGTAGTTCTAGGTCG | 59.969 | 50.000 | 5.77 | 5.99 | 0.00 | 4.79 |
458 | 471 | 3.015327 | AGTCATTCGCGTAGTTCTAGGT | 58.985 | 45.455 | 5.77 | 0.00 | 0.00 | 3.08 |
459 | 472 | 3.694535 | AGTCATTCGCGTAGTTCTAGG | 57.305 | 47.619 | 5.77 | 0.00 | 0.00 | 3.02 |
460 | 473 | 6.910972 | TGAATAAGTCATTCGCGTAGTTCTAG | 59.089 | 38.462 | 5.77 | 0.00 | 45.25 | 2.43 |
461 | 474 | 6.690098 | GTGAATAAGTCATTCGCGTAGTTCTA | 59.310 | 38.462 | 5.77 | 0.00 | 45.25 | 2.10 |
462 | 475 | 5.515626 | GTGAATAAGTCATTCGCGTAGTTCT | 59.484 | 40.000 | 5.77 | 0.00 | 45.25 | 3.01 |
464 | 477 | 5.697848 | GTGAATAAGTCATTCGCGTAGTT | 57.302 | 39.130 | 5.77 | 2.59 | 45.25 | 2.24 |
471 | 484 | 3.482472 | CGTCTCGGTGAATAAGTCATTCG | 59.518 | 47.826 | 0.00 | 0.00 | 45.25 | 3.34 |
472 | 485 | 3.797256 | CCGTCTCGGTGAATAAGTCATTC | 59.203 | 47.826 | 0.00 | 0.00 | 42.73 | 2.67 |
474 | 487 | 3.438297 | CCGTCTCGGTGAATAAGTCAT | 57.562 | 47.619 | 0.00 | 0.00 | 42.73 | 3.06 |
475 | 488 | 2.933495 | CCGTCTCGGTGAATAAGTCA | 57.067 | 50.000 | 0.00 | 0.00 | 42.73 | 3.41 |
488 | 501 | 5.176590 | CGTAATACAGTACTACCTCCGTCTC | 59.823 | 48.000 | 0.00 | 0.00 | 0.00 | 3.36 |
490 | 503 | 4.811557 | ACGTAATACAGTACTACCTCCGTC | 59.188 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
492 | 505 | 4.811024 | TGACGTAATACAGTACTACCTCCG | 59.189 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
494 | 507 | 7.488187 | TGATGACGTAATACAGTACTACCTC | 57.512 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
495 | 508 | 7.095313 | CGATGATGACGTAATACAGTACTACCT | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 3.08 |
496 | 509 | 7.014115 | CGATGATGACGTAATACAGTACTACC | 58.986 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
500 | 513 | 6.891975 | GTCGATGATGACGTAATACAGTAC | 57.108 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
512 | 1768 | 2.783828 | ATGACCTCGTCGATGATGAC | 57.216 | 50.000 | 15.71 | 10.46 | 34.95 | 3.06 |
515 | 1771 | 2.031870 | TCCAATGACCTCGTCGATGAT | 58.968 | 47.619 | 7.99 | 0.00 | 34.95 | 2.45 |
546 | 1802 | 2.111669 | CTGTGCCTGTGCCTGTGA | 59.888 | 61.111 | 0.00 | 0.00 | 36.33 | 3.58 |
548 | 1804 | 4.962836 | GGCTGTGCCTGTGCCTGT | 62.963 | 66.667 | 0.73 | 0.00 | 46.69 | 4.00 |
564 | 1820 | 1.134580 | AGTTGACATGATCCGCTCTGG | 60.135 | 52.381 | 0.00 | 0.00 | 40.09 | 3.86 |
567 | 1823 | 1.662629 | CACAGTTGACATGATCCGCTC | 59.337 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
571 | 1827 | 4.410492 | GTCAACACAGTTGACATGATCC | 57.590 | 45.455 | 28.40 | 7.98 | 45.89 | 3.36 |
585 | 1841 | 0.104304 | ACACGAGTCTGGGTCAACAC | 59.896 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
668 | 1936 | 2.491693 | GGAGAAGACCAGACAGAGACAG | 59.508 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
669 | 1937 | 2.158460 | TGGAGAAGACCAGACAGAGACA | 60.158 | 50.000 | 0.00 | 0.00 | 34.77 | 3.41 |
670 | 1938 | 2.230266 | GTGGAGAAGACCAGACAGAGAC | 59.770 | 54.545 | 0.00 | 0.00 | 40.85 | 3.36 |
671 | 1939 | 2.520069 | GTGGAGAAGACCAGACAGAGA | 58.480 | 52.381 | 0.00 | 0.00 | 40.85 | 3.10 |
672 | 1940 | 1.201181 | CGTGGAGAAGACCAGACAGAG | 59.799 | 57.143 | 0.00 | 0.00 | 40.85 | 3.35 |
673 | 1941 | 1.248486 | CGTGGAGAAGACCAGACAGA | 58.752 | 55.000 | 0.00 | 0.00 | 40.85 | 3.41 |
739 | 2031 | 3.181516 | GCCTCTTGTTAATGCAGACGAAG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 3.79 |
754 | 2047 | 1.838112 | TTTATGGGTGCTGCCTCTTG | 58.162 | 50.000 | 0.00 | 0.00 | 37.43 | 3.02 |
767 | 2060 | 4.619160 | GCCTCTTCCTTGTTGCTTTTATGG | 60.619 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
768 | 2061 | 4.488879 | GCCTCTTCCTTGTTGCTTTTATG | 58.511 | 43.478 | 0.00 | 0.00 | 0.00 | 1.90 |
807 | 2104 | 4.470664 | TGATGATTCTTGGGAAAAATGGGG | 59.529 | 41.667 | 0.00 | 0.00 | 34.90 | 4.96 |
830 | 2127 | 7.653311 | CCTTTTTCTTTTCTCGATTGGTTGATT | 59.347 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
858 | 2160 | 3.785499 | GCCGGCCGTCGTCTTTTC | 61.785 | 66.667 | 26.12 | 0.00 | 37.11 | 2.29 |
922 | 2240 | 3.257393 | GTGAGGTGATGACTGATGACAC | 58.743 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
945 | 2263 | 2.574955 | GCGTCTGGTCTGGTCTGGT | 61.575 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
947 | 2265 | 2.126307 | CGCGTCTGGTCTGGTCTG | 60.126 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
948 | 2266 | 2.597805 | ACGCGTCTGGTCTGGTCT | 60.598 | 61.111 | 5.58 | 0.00 | 0.00 | 3.85 |
949 | 2267 | 2.126424 | GACGCGTCTGGTCTGGTC | 60.126 | 66.667 | 31.12 | 1.26 | 0.00 | 4.02 |
971 | 2289 | 1.320344 | CGGTCGTGGATGAGGGAAGA | 61.320 | 60.000 | 0.00 | 0.00 | 0.00 | 2.87 |
972 | 2290 | 1.141881 | CGGTCGTGGATGAGGGAAG | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
973 | 2291 | 1.601419 | GACGGTCGTGGATGAGGGAA | 61.601 | 60.000 | 0.00 | 0.00 | 0.00 | 3.97 |
974 | 2292 | 2.036731 | ACGGTCGTGGATGAGGGA | 59.963 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
994 | 2312 | 0.617820 | ACTGGTTGGATAGGAGGCGT | 60.618 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
996 | 2314 | 1.134068 | GGAACTGGTTGGATAGGAGGC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 4.70 |
1681 | 7395 | 0.458543 | TGATTGACGCGAGAGGAAGC | 60.459 | 55.000 | 15.93 | 0.67 | 0.00 | 3.86 |
1685 | 7410 | 3.747099 | AATTTTGATTGACGCGAGAGG | 57.253 | 42.857 | 15.93 | 0.00 | 0.00 | 3.69 |
1686 | 7411 | 4.667948 | GCATAATTTTGATTGACGCGAGAG | 59.332 | 41.667 | 15.93 | 0.00 | 0.00 | 3.20 |
1690 | 7415 | 5.501715 | AGTAGCATAATTTTGATTGACGCG | 58.498 | 37.500 | 3.53 | 3.53 | 0.00 | 6.01 |
1693 | 7418 | 8.462016 | ACAAGGAGTAGCATAATTTTGATTGAC | 58.538 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
1710 | 7435 | 1.682854 | ACCACGAACGAACAAGGAGTA | 59.317 | 47.619 | 0.14 | 0.00 | 0.00 | 2.59 |
1712 | 7437 | 1.137513 | GACCACGAACGAACAAGGAG | 58.862 | 55.000 | 0.14 | 0.00 | 0.00 | 3.69 |
1713 | 7438 | 0.595567 | CGACCACGAACGAACAAGGA | 60.596 | 55.000 | 0.14 | 0.00 | 42.66 | 3.36 |
1715 | 7440 | 2.876052 | TCGACCACGAACGAACAAG | 58.124 | 52.632 | 0.14 | 0.00 | 45.74 | 3.16 |
1726 | 7451 | 6.636666 | TTTCGACAGTAATTAATCGACCAC | 57.363 | 37.500 | 14.12 | 0.00 | 42.84 | 4.16 |
1746 | 7498 | 4.082245 | TCCTTCATCCCTGCGAAAAATTTC | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
1750 | 7502 | 2.436417 | CTCCTTCATCCCTGCGAAAAA | 58.564 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
1751 | 7503 | 1.950484 | GCTCCTTCATCCCTGCGAAAA | 60.950 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
1930 | 10030 | 5.521372 | GGATTAATCAGTGAAATTTGCTGGC | 59.479 | 40.000 | 17.07 | 0.00 | 0.00 | 4.85 |
1932 | 10032 | 6.532657 | GTGGGATTAATCAGTGAAATTTGCTG | 59.467 | 38.462 | 17.07 | 11.22 | 0.00 | 4.41 |
1933 | 10033 | 6.625740 | CGTGGGATTAATCAGTGAAATTTGCT | 60.626 | 38.462 | 17.07 | 0.00 | 0.00 | 3.91 |
1934 | 10034 | 5.516339 | CGTGGGATTAATCAGTGAAATTTGC | 59.484 | 40.000 | 17.07 | 0.00 | 0.00 | 3.68 |
1954 | 10055 | 4.005650 | TGAGTGGTAGTAAGTACTCGTGG | 58.994 | 47.826 | 0.00 | 0.00 | 41.78 | 4.94 |
1956 | 10057 | 7.928307 | TTAATGAGTGGTAGTAAGTACTCGT | 57.072 | 36.000 | 0.00 | 0.00 | 41.78 | 4.18 |
1991 | 10097 | 9.613428 | TTCATTTAGTCGGAATGATAATCAAGT | 57.387 | 29.630 | 0.91 | 0.00 | 41.61 | 3.16 |
1992 | 10098 | 9.869844 | GTTCATTTAGTCGGAATGATAATCAAG | 57.130 | 33.333 | 0.91 | 0.00 | 41.61 | 3.02 |
1993 | 10099 | 8.836413 | GGTTCATTTAGTCGGAATGATAATCAA | 58.164 | 33.333 | 0.91 | 0.00 | 41.61 | 2.57 |
1994 | 10100 | 7.990314 | TGGTTCATTTAGTCGGAATGATAATCA | 59.010 | 33.333 | 0.91 | 0.00 | 41.61 | 2.57 |
1995 | 10101 | 8.378172 | TGGTTCATTTAGTCGGAATGATAATC | 57.622 | 34.615 | 0.91 | 0.00 | 41.61 | 1.75 |
1996 | 10102 | 8.924511 | ATGGTTCATTTAGTCGGAATGATAAT | 57.075 | 30.769 | 0.91 | 0.00 | 41.61 | 1.28 |
1997 | 10103 | 7.990314 | TGATGGTTCATTTAGTCGGAATGATAA | 59.010 | 33.333 | 0.91 | 0.00 | 41.61 | 1.75 |
1998 | 10104 | 7.505258 | TGATGGTTCATTTAGTCGGAATGATA | 58.495 | 34.615 | 0.91 | 0.00 | 41.61 | 2.15 |
2001 | 10107 | 6.435430 | TTGATGGTTCATTTAGTCGGAATG | 57.565 | 37.500 | 0.00 | 0.00 | 36.15 | 2.67 |
2026 | 10133 | 0.938713 | TTGGTTGCGTTAGTTCGTGG | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2033 | 10140 | 5.704888 | TGGTTGATTAATTGGTTGCGTTAG | 58.295 | 37.500 | 0.00 | 0.00 | 0.00 | 2.34 |
2040 | 10147 | 5.482163 | CCCTGTTGGTTGATTAATTGGTT | 57.518 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
2064 | 10171 | 2.805353 | CCGTCAGCGTCCTTGTCG | 60.805 | 66.667 | 0.00 | 0.00 | 36.15 | 4.35 |
2130 | 10240 | 2.746362 | GGAGCAGTGAAATTGAGAGTGG | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2137 | 10248 | 2.662791 | CGTGAACGGAGCAGTGAAATTG | 60.663 | 50.000 | 0.00 | 0.00 | 35.37 | 2.32 |
2157 | 10268 | 0.949105 | CCCGAACCTGAACCTGAACG | 60.949 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2170 | 10281 | 1.145803 | CTCTTTGACCGAACCCGAAC | 58.854 | 55.000 | 0.00 | 0.00 | 38.22 | 3.95 |
2174 | 10285 | 1.673329 | GCTCTCTCTTTGACCGAACCC | 60.673 | 57.143 | 0.00 | 0.00 | 0.00 | 4.11 |
2199 | 10310 | 0.532115 | AAAAATCGGTCATGGCAGCC | 59.468 | 50.000 | 3.66 | 3.66 | 0.00 | 4.85 |
2205 | 10319 | 3.305897 | TGATCGTCGAAAAATCGGTCATG | 59.694 | 43.478 | 4.42 | 0.00 | 39.28 | 3.07 |
2236 | 10350 | 5.892568 | AGTCGCAAGTACTAGTATTCAAGG | 58.107 | 41.667 | 5.75 | 0.00 | 39.48 | 3.61 |
2246 | 10360 | 5.227908 | CAAAGGAGAAAGTCGCAAGTACTA | 58.772 | 41.667 | 0.00 | 0.00 | 39.48 | 1.82 |
2247 | 10361 | 4.058817 | CAAAGGAGAAAGTCGCAAGTACT | 58.941 | 43.478 | 0.00 | 0.00 | 39.48 | 2.73 |
2363 | 10920 | 1.846007 | AATATTTGGCAGGTTCGGCA | 58.154 | 45.000 | 0.00 | 0.00 | 40.11 | 5.69 |
2412 | 10979 | 1.512926 | GCCGGATATCAATTGCTCGT | 58.487 | 50.000 | 5.05 | 0.00 | 0.00 | 4.18 |
2413 | 10980 | 0.439985 | CGCCGGATATCAATTGCTCG | 59.560 | 55.000 | 5.05 | 0.00 | 0.00 | 5.03 |
2425 | 11027 | 0.828022 | TACAAGGTCAATCGCCGGAT | 59.172 | 50.000 | 5.05 | 0.00 | 0.00 | 4.18 |
2427 | 11029 | 0.725117 | GTTACAAGGTCAATCGCCGG | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2430 | 11032 | 2.092211 | CGTCAGTTACAAGGTCAATCGC | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
2448 | 11050 | 4.738740 | CGACAGATTACCAGAATAACCGTC | 59.261 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
2605 | 11294 | 0.455633 | CAAGAGAAGCACGGCATTGC | 60.456 | 55.000 | 0.00 | 0.00 | 43.34 | 3.56 |
2632 | 11321 | 5.223382 | ACTACTACTACGAATCATGCATGC | 58.777 | 41.667 | 22.25 | 11.82 | 0.00 | 4.06 |
2637 | 11326 | 7.360361 | TGCACATACTACTACTACGAATCATG | 58.640 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
2638 | 11327 | 7.506328 | TGCACATACTACTACTACGAATCAT | 57.494 | 36.000 | 0.00 | 0.00 | 0.00 | 2.45 |
2639 | 11328 | 6.930667 | TGCACATACTACTACTACGAATCA | 57.069 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2640 | 11329 | 7.637229 | TCTTGCACATACTACTACTACGAATC | 58.363 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
2641 | 11330 | 7.563888 | TCTTGCACATACTACTACTACGAAT | 57.436 | 36.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2642 | 11331 | 6.990341 | TCTTGCACATACTACTACTACGAA | 57.010 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
2643 | 11332 | 7.415229 | CAATCTTGCACATACTACTACTACGA | 58.585 | 38.462 | 0.00 | 0.00 | 0.00 | 3.43 |
2644 | 11333 | 6.637254 | CCAATCTTGCACATACTACTACTACG | 59.363 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
2645 | 11334 | 7.490000 | ACCAATCTTGCACATACTACTACTAC | 58.510 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
2646 | 11335 | 7.468220 | CGACCAATCTTGCACATACTACTACTA | 60.468 | 40.741 | 0.00 | 0.00 | 0.00 | 1.82 |
2647 | 11336 | 6.546428 | ACCAATCTTGCACATACTACTACT | 57.454 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2648 | 11337 | 5.459107 | CGACCAATCTTGCACATACTACTAC | 59.541 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2649 | 11338 | 5.451381 | CCGACCAATCTTGCACATACTACTA | 60.451 | 44.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2650 | 11339 | 4.433615 | CGACCAATCTTGCACATACTACT | 58.566 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2651 | 11340 | 3.555956 | CCGACCAATCTTGCACATACTAC | 59.444 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
2654 | 11343 | 1.064060 | GCCGACCAATCTTGCACATAC | 59.936 | 52.381 | 0.00 | 0.00 | 0.00 | 2.39 |
2658 | 11347 | 1.503542 | CAGCCGACCAATCTTGCAC | 59.496 | 57.895 | 0.00 | 0.00 | 0.00 | 4.57 |
2664 | 11353 | 0.674895 | AACAGAGCAGCCGACCAATC | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
2672 | 11361 | 1.372623 | GCAGCAAAACAGAGCAGCC | 60.373 | 57.895 | 0.00 | 0.00 | 37.30 | 4.85 |
2673 | 11362 | 0.249155 | TTGCAGCAAAACAGAGCAGC | 60.249 | 50.000 | 4.99 | 0.00 | 42.67 | 5.25 |
2691 | 11380 | 4.640789 | TTAGTTTCATGCAACACCGTTT | 57.359 | 36.364 | 10.86 | 0.00 | 0.00 | 3.60 |
2694 | 11383 | 6.176975 | TCTAATTAGTTTCATGCAACACCG | 57.823 | 37.500 | 10.86 | 0.00 | 0.00 | 4.94 |
2716 | 11405 | 7.955324 | CAGCAAATTGATTCATTGACAACATTC | 59.045 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
2740 | 11438 | 2.093816 | TCTCCAGATTGTACAGCTGCAG | 60.094 | 50.000 | 15.27 | 10.11 | 0.00 | 4.41 |
2960 | 11667 | 2.231380 | TTCCAGGTGAAGAGGCCCC | 61.231 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
3301 | 12008 | 1.774894 | TAGTTGGGCGGCTGTTCCTT | 61.775 | 55.000 | 9.56 | 0.00 | 0.00 | 3.36 |
3306 | 12013 | 2.347490 | CAGTAGTTGGGCGGCTGT | 59.653 | 61.111 | 9.56 | 0.00 | 0.00 | 4.40 |
3543 | 12373 | 2.097466 | CGACTTCTTTTGCCACTTGTGT | 59.903 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
3544 | 12374 | 2.541588 | CCGACTTCTTTTGCCACTTGTG | 60.542 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3599 | 12437 | 1.812922 | GGTGGAGCGAGCACTGATG | 60.813 | 63.158 | 0.00 | 0.00 | 0.00 | 3.07 |
3602 | 12440 | 2.031516 | CAAGGTGGAGCGAGCACTG | 61.032 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
3603 | 12441 | 1.758440 | TTCAAGGTGGAGCGAGCACT | 61.758 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
3606 | 12444 | 1.004440 | AGTTCAAGGTGGAGCGAGC | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 5.03 |
3607 | 12445 | 0.034059 | ACAGTTCAAGGTGGAGCGAG | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3635 | 12473 | 2.361757 | TCATTTTGTTCACAGGCAGGTG | 59.638 | 45.455 | 3.23 | 3.23 | 40.16 | 4.00 |
3637 | 12475 | 3.731652 | TTCATTTTGTTCACAGGCAGG | 57.268 | 42.857 | 0.00 | 0.00 | 0.00 | 4.85 |
3641 | 12479 | 6.218019 | ACATCACATTCATTTTGTTCACAGG | 58.782 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3644 | 12482 | 6.479660 | ACCAACATCACATTCATTTTGTTCAC | 59.520 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
3646 | 12484 | 6.564499 | GCACCAACATCACATTCATTTTGTTC | 60.564 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
3649 | 12487 | 4.750598 | TGCACCAACATCACATTCATTTTG | 59.249 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
3658 | 12496 | 0.179059 | ACGTCTGCACCAACATCACA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3763 | 13519 | 1.375523 | GTACACCGCCACCTTGAGG | 60.376 | 63.158 | 0.00 | 0.00 | 42.17 | 3.86 |
3877 | 13639 | 5.882557 | AGTGAATTAGCAGTACCATTGGAAG | 59.117 | 40.000 | 10.37 | 0.00 | 0.00 | 3.46 |
3891 | 13653 | 2.694109 | ACGGAGGGAGTAGTGAATTAGC | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
3892 | 13654 | 3.318557 | GGACGGAGGGAGTAGTGAATTAG | 59.681 | 52.174 | 0.00 | 0.00 | 0.00 | 1.73 |
3894 | 13656 | 2.108970 | GGACGGAGGGAGTAGTGAATT | 58.891 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
3900 | 13662 | 0.679002 | TTCGTGGACGGAGGGAGTAG | 60.679 | 60.000 | 0.00 | 0.00 | 40.29 | 2.57 |
3901 | 13663 | 0.033796 | ATTCGTGGACGGAGGGAGTA | 60.034 | 55.000 | 0.00 | 0.00 | 40.29 | 2.59 |
3902 | 13664 | 0.033796 | TATTCGTGGACGGAGGGAGT | 60.034 | 55.000 | 0.00 | 0.00 | 40.29 | 3.85 |
3903 | 13665 | 1.067212 | CTTATTCGTGGACGGAGGGAG | 59.933 | 57.143 | 0.00 | 0.00 | 40.29 | 4.30 |
3904 | 13666 | 1.108776 | CTTATTCGTGGACGGAGGGA | 58.891 | 55.000 | 0.00 | 0.00 | 40.29 | 4.20 |
3907 | 13669 | 2.649331 | ACACTTATTCGTGGACGGAG | 57.351 | 50.000 | 0.00 | 0.00 | 39.19 | 4.63 |
3908 | 13670 | 3.492421 | GTACACTTATTCGTGGACGGA | 57.508 | 47.619 | 0.00 | 0.00 | 38.82 | 4.69 |
3911 | 13673 | 5.742926 | GCTAGAAGTACACTTATTCGTGGAC | 59.257 | 44.000 | 0.00 | 0.00 | 46.77 | 4.02 |
3912 | 13674 | 5.651139 | AGCTAGAAGTACACTTATTCGTGGA | 59.349 | 40.000 | 0.00 | 0.00 | 39.19 | 4.02 |
3913 | 13675 | 5.892568 | AGCTAGAAGTACACTTATTCGTGG | 58.107 | 41.667 | 0.00 | 0.00 | 39.19 | 4.94 |
3917 | 13679 | 8.657729 | GGACAAAAGCTAGAAGTACACTTATTC | 58.342 | 37.037 | 0.00 | 0.00 | 36.11 | 1.75 |
3918 | 13680 | 8.376270 | AGGACAAAAGCTAGAAGTACACTTATT | 58.624 | 33.333 | 0.00 | 0.00 | 36.11 | 1.40 |
3919 | 13681 | 7.908453 | AGGACAAAAGCTAGAAGTACACTTAT | 58.092 | 34.615 | 0.00 | 0.00 | 36.11 | 1.73 |
3921 | 13683 | 6.176014 | AGGACAAAAGCTAGAAGTACACTT | 57.824 | 37.500 | 0.00 | 0.00 | 39.23 | 3.16 |
3922 | 13684 | 5.810080 | AGGACAAAAGCTAGAAGTACACT | 57.190 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
3923 | 13685 | 6.100668 | CCTAGGACAAAAGCTAGAAGTACAC | 58.899 | 44.000 | 1.05 | 0.00 | 0.00 | 2.90 |
3925 | 13687 | 6.071503 | TGACCTAGGACAAAAGCTAGAAGTAC | 60.072 | 42.308 | 17.98 | 0.00 | 0.00 | 2.73 |
3926 | 13688 | 6.014647 | TGACCTAGGACAAAAGCTAGAAGTA | 58.985 | 40.000 | 17.98 | 0.00 | 0.00 | 2.24 |
3928 | 13690 | 5.407407 | TGACCTAGGACAAAAGCTAGAAG | 57.593 | 43.478 | 17.98 | 0.00 | 0.00 | 2.85 |
3930 | 13692 | 5.818678 | TTTGACCTAGGACAAAAGCTAGA | 57.181 | 39.130 | 29.31 | 11.45 | 36.99 | 2.43 |
3932 | 13694 | 7.504238 | TGAAATTTTGACCTAGGACAAAAGCTA | 59.496 | 33.333 | 37.08 | 26.48 | 46.30 | 3.32 |
3933 | 13695 | 6.323739 | TGAAATTTTGACCTAGGACAAAAGCT | 59.676 | 34.615 | 37.08 | 30.26 | 46.30 | 3.74 |
3934 | 13696 | 6.512297 | TGAAATTTTGACCTAGGACAAAAGC | 58.488 | 36.000 | 37.08 | 30.64 | 46.30 | 3.51 |
3935 | 13697 | 8.940768 | TTTGAAATTTTGACCTAGGACAAAAG | 57.059 | 30.769 | 37.08 | 8.04 | 46.30 | 2.27 |
3938 | 13700 | 8.073467 | AGTTTTGAAATTTTGACCTAGGACAA | 57.927 | 30.769 | 20.70 | 20.70 | 0.00 | 3.18 |
3974 | 13736 | 9.032420 | GCGAATAAGTGTACTTCTAGCTTTTAT | 57.968 | 33.333 | 0.00 | 0.00 | 37.40 | 1.40 |
3975 | 13737 | 7.219535 | CGCGAATAAGTGTACTTCTAGCTTTTA | 59.780 | 37.037 | 0.00 | 0.00 | 37.40 | 1.52 |
3976 | 13738 | 6.034683 | CGCGAATAAGTGTACTTCTAGCTTTT | 59.965 | 38.462 | 0.00 | 0.00 | 37.40 | 2.27 |
3977 | 13739 | 5.515626 | CGCGAATAAGTGTACTTCTAGCTTT | 59.484 | 40.000 | 0.00 | 0.00 | 37.40 | 3.51 |
3978 | 13740 | 5.035443 | CGCGAATAAGTGTACTTCTAGCTT | 58.965 | 41.667 | 0.00 | 0.00 | 37.40 | 3.74 |
3979 | 13741 | 4.497674 | CCGCGAATAAGTGTACTTCTAGCT | 60.498 | 45.833 | 8.23 | 0.00 | 37.40 | 3.32 |
3980 | 13742 | 3.729716 | CCGCGAATAAGTGTACTTCTAGC | 59.270 | 47.826 | 8.23 | 3.15 | 37.40 | 3.42 |
3981 | 13743 | 4.968788 | GTCCGCGAATAAGTGTACTTCTAG | 59.031 | 45.833 | 8.23 | 0.00 | 37.40 | 2.43 |
3982 | 13744 | 4.494690 | CGTCCGCGAATAAGTGTACTTCTA | 60.495 | 45.833 | 8.23 | 0.00 | 41.33 | 2.10 |
3983 | 13745 | 3.730061 | CGTCCGCGAATAAGTGTACTTCT | 60.730 | 47.826 | 8.23 | 0.00 | 41.33 | 2.85 |
3984 | 13746 | 2.529090 | CGTCCGCGAATAAGTGTACTTC | 59.471 | 50.000 | 8.23 | 0.00 | 41.33 | 3.01 |
3985 | 13747 | 2.523015 | CGTCCGCGAATAAGTGTACTT | 58.477 | 47.619 | 8.23 | 2.51 | 41.33 | 2.24 |
3986 | 13748 | 1.202222 | CCGTCCGCGAATAAGTGTACT | 60.202 | 52.381 | 8.23 | 0.00 | 41.33 | 2.73 |
3987 | 13749 | 1.194495 | CCGTCCGCGAATAAGTGTAC | 58.806 | 55.000 | 8.23 | 0.00 | 41.33 | 2.90 |
3988 | 13750 | 1.064505 | CTCCGTCCGCGAATAAGTGTA | 59.935 | 52.381 | 8.23 | 0.00 | 41.33 | 2.90 |
3989 | 13751 | 0.179145 | CTCCGTCCGCGAATAAGTGT | 60.179 | 55.000 | 8.23 | 0.00 | 41.33 | 3.55 |
3990 | 13752 | 0.870307 | CCTCCGTCCGCGAATAAGTG | 60.870 | 60.000 | 8.23 | 0.00 | 41.33 | 3.16 |
3991 | 13753 | 1.436336 | CCTCCGTCCGCGAATAAGT | 59.564 | 57.895 | 8.23 | 0.00 | 41.33 | 2.24 |
3992 | 13754 | 1.299926 | CCCTCCGTCCGCGAATAAG | 60.300 | 63.158 | 8.23 | 0.00 | 41.33 | 1.73 |
3993 | 13755 | 1.731433 | CTCCCTCCGTCCGCGAATAA | 61.731 | 60.000 | 8.23 | 0.00 | 41.33 | 1.40 |
3994 | 13756 | 2.124193 | TCCCTCCGTCCGCGAATA | 60.124 | 61.111 | 8.23 | 0.00 | 41.33 | 1.75 |
3995 | 13757 | 2.898920 | TACTCCCTCCGTCCGCGAAT | 62.899 | 60.000 | 8.23 | 0.00 | 41.33 | 3.34 |
3996 | 13758 | 2.898920 | ATACTCCCTCCGTCCGCGAA | 62.899 | 60.000 | 8.23 | 0.00 | 41.33 | 4.70 |
3997 | 13759 | 3.411114 | ATACTCCCTCCGTCCGCGA | 62.411 | 63.158 | 8.23 | 0.00 | 41.33 | 5.87 |
3998 | 13760 | 2.905880 | ATACTCCCTCCGTCCGCG | 60.906 | 66.667 | 0.00 | 0.00 | 37.95 | 6.46 |
3999 | 13761 | 0.820891 | TACATACTCCCTCCGTCCGC | 60.821 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
4000 | 13762 | 1.236628 | CTACATACTCCCTCCGTCCG | 58.763 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4001 | 13763 | 0.960286 | GCTACATACTCCCTCCGTCC | 59.040 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4002 | 13764 | 1.688772 | TGCTACATACTCCCTCCGTC | 58.311 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4003 | 13765 | 1.755380 | GTTGCTACATACTCCCTCCGT | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
4004 | 13766 | 2.032620 | AGTTGCTACATACTCCCTCCG | 58.967 | 52.381 | 0.13 | 0.00 | 0.00 | 4.63 |
4005 | 13767 | 3.301274 | AGAGTTGCTACATACTCCCTCC | 58.699 | 50.000 | 0.13 | 0.00 | 41.31 | 4.30 |
4006 | 13768 | 6.265649 | TGATTAGAGTTGCTACATACTCCCTC | 59.734 | 42.308 | 0.13 | 0.00 | 41.31 | 4.30 |
4007 | 13769 | 6.136857 | TGATTAGAGTTGCTACATACTCCCT | 58.863 | 40.000 | 0.13 | 0.00 | 41.31 | 4.20 |
4008 | 13770 | 6.406692 | TGATTAGAGTTGCTACATACTCCC | 57.593 | 41.667 | 0.13 | 0.00 | 41.31 | 4.30 |
4009 | 13771 | 9.632807 | CTAATGATTAGAGTTGCTACATACTCC | 57.367 | 37.037 | 6.34 | 0.00 | 41.31 | 3.85 |
4056 | 13818 | 2.157834 | ATTGTTCGTGCGTACCTTCA | 57.842 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4058 | 13820 | 6.724694 | TTAATAATTGTTCGTGCGTACCTT | 57.275 | 33.333 | 0.00 | 0.00 | 0.00 | 3.50 |
4059 | 13821 | 6.913873 | ATTAATAATTGTTCGTGCGTACCT | 57.086 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
4060 | 13822 | 8.936936 | GTTAATTAATAATTGTTCGTGCGTACC | 58.063 | 33.333 | 8.39 | 0.00 | 32.38 | 3.34 |
4061 | 13823 | 9.475505 | TGTTAATTAATAATTGTTCGTGCGTAC | 57.524 | 29.630 | 8.39 | 0.00 | 32.38 | 3.67 |
4063 | 13825 | 8.951954 | TTGTTAATTAATAATTGTTCGTGCGT | 57.048 | 26.923 | 8.39 | 0.00 | 32.38 | 5.24 |
4092 | 13873 | 4.487948 | CTGCACGTCCATCAATTCATTTT | 58.512 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
4101 | 13882 | 2.358615 | GTGCCTGCACGTCCATCA | 60.359 | 61.111 | 6.50 | 0.00 | 37.19 | 3.07 |
4314 | 14318 | 0.246086 | AGCAGAAGACGGAGCAGAAG | 59.754 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4354 | 14358 | 3.851403 | CCGCACATAGAACAAAAATTCCG | 59.149 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
4382 | 14386 | 1.745489 | GGCCAGATTGGACCACGAC | 60.745 | 63.158 | 0.00 | 0.00 | 40.64 | 4.34 |
4383 | 14387 | 2.668632 | GGCCAGATTGGACCACGA | 59.331 | 61.111 | 0.00 | 0.00 | 40.64 | 4.35 |
4406 | 14426 | 1.668101 | GACCACTACCGGAGAGGCAG | 61.668 | 65.000 | 9.46 | 0.75 | 46.52 | 4.85 |
4408 | 14428 | 2.424733 | GGACCACTACCGGAGAGGC | 61.425 | 68.421 | 9.46 | 5.96 | 46.52 | 4.70 |
4410 | 14430 | 3.510846 | CGGACCACTACCGGAGAG | 58.489 | 66.667 | 9.46 | 7.64 | 45.65 | 3.20 |
4418 | 14438 | 2.440796 | CCTACCGCCGGACCACTA | 60.441 | 66.667 | 11.71 | 0.00 | 0.00 | 2.74 |
4530 | 14651 | 7.870509 | TCTTCCAGAGGTTCAATTTCATATG | 57.129 | 36.000 | 0.00 | 0.00 | 0.00 | 1.78 |
4545 | 14666 | 3.614616 | GTGCGTACAGATTTCTTCCAGAG | 59.385 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
4569 | 14690 | 4.085055 | CGTGCCAAAGACGCATAATACTAG | 60.085 | 45.833 | 0.00 | 0.00 | 38.76 | 2.57 |
4570 | 14691 | 3.799963 | CGTGCCAAAGACGCATAATACTA | 59.200 | 43.478 | 0.00 | 0.00 | 38.76 | 1.82 |
4576 | 14697 | 0.245266 | TCTCGTGCCAAAGACGCATA | 59.755 | 50.000 | 0.00 | 0.00 | 38.76 | 3.14 |
4577 | 14698 | 1.005037 | TCTCGTGCCAAAGACGCAT | 60.005 | 52.632 | 0.00 | 0.00 | 38.76 | 4.73 |
4578 | 14699 | 1.954146 | GTCTCGTGCCAAAGACGCA | 60.954 | 57.895 | 0.00 | 0.00 | 36.75 | 5.24 |
4579 | 14700 | 2.853914 | GTCTCGTGCCAAAGACGC | 59.146 | 61.111 | 0.00 | 0.00 | 36.75 | 5.19 |
4652 | 14786 | 1.134965 | CCGAGCTCTTCTGACCGATTT | 60.135 | 52.381 | 12.85 | 0.00 | 0.00 | 2.17 |
4653 | 14787 | 0.457851 | CCGAGCTCTTCTGACCGATT | 59.542 | 55.000 | 12.85 | 0.00 | 0.00 | 3.34 |
4654 | 14788 | 0.394488 | TCCGAGCTCTTCTGACCGAT | 60.394 | 55.000 | 12.85 | 0.00 | 0.00 | 4.18 |
4664 | 14800 | 0.682855 | CCTCCTCTGTTCCGAGCTCT | 60.683 | 60.000 | 12.85 | 0.00 | 0.00 | 4.09 |
4667 | 14803 | 0.608640 | TTTCCTCCTCTGTTCCGAGC | 59.391 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
4671 | 14807 | 9.208022 | CAAAATTTAAATTTCCTCCTCTGTTCC | 57.792 | 33.333 | 22.96 | 0.00 | 37.62 | 3.62 |
4684 | 14820 | 9.606631 | TGGTTAGTCAGTGCAAAATTTAAATTT | 57.393 | 25.926 | 18.40 | 18.40 | 40.15 | 1.82 |
4685 | 14821 | 9.606631 | TTGGTTAGTCAGTGCAAAATTTAAATT | 57.393 | 25.926 | 7.64 | 7.64 | 0.00 | 1.82 |
4686 | 14822 | 9.260002 | CTTGGTTAGTCAGTGCAAAATTTAAAT | 57.740 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
4687 | 14823 | 7.708752 | CCTTGGTTAGTCAGTGCAAAATTTAAA | 59.291 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
4688 | 14824 | 7.068839 | TCCTTGGTTAGTCAGTGCAAAATTTAA | 59.931 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
4689 | 14825 | 6.547880 | TCCTTGGTTAGTCAGTGCAAAATTTA | 59.452 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
4755 | 15114 | 5.286558 | CGCACTAGTAAGAAACAGTAGAAGC | 59.713 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4772 | 15131 | 5.579119 | TGTATGTGGATGTTTAACGCACTAG | 59.421 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4776 | 15135 | 4.320023 | ACTGTATGTGGATGTTTAACGCA | 58.680 | 39.130 | 0.00 | 0.00 | 0.00 | 5.24 |
4777 | 15136 | 4.201783 | GGACTGTATGTGGATGTTTAACGC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.84 |
4781 | 15140 | 5.338056 | GGTCTGGACTGTATGTGGATGTTTA | 60.338 | 44.000 | 0.67 | 0.00 | 0.00 | 2.01 |
4800 | 15159 | 2.099652 | TTGCCACTGACTCCGGTCTG | 62.100 | 60.000 | 0.00 | 0.00 | 43.84 | 3.51 |
4837 | 15206 | 6.980397 | ACAACAATGACAAAGATCAAAACTCC | 59.020 | 34.615 | 0.00 | 0.00 | 30.82 | 3.85 |
4838 | 15207 | 7.515684 | GCACAACAATGACAAAGATCAAAACTC | 60.516 | 37.037 | 0.00 | 0.00 | 30.82 | 3.01 |
4839 | 15208 | 6.256321 | GCACAACAATGACAAAGATCAAAACT | 59.744 | 34.615 | 0.00 | 0.00 | 30.82 | 2.66 |
4841 | 15210 | 6.104665 | TGCACAACAATGACAAAGATCAAAA | 58.895 | 32.000 | 0.00 | 0.00 | 30.82 | 2.44 |
4842 | 15211 | 5.658468 | TGCACAACAATGACAAAGATCAAA | 58.342 | 33.333 | 0.00 | 0.00 | 30.82 | 2.69 |
4843 | 15212 | 5.259832 | TGCACAACAATGACAAAGATCAA | 57.740 | 34.783 | 0.00 | 0.00 | 30.82 | 2.57 |
4894 | 15280 | 1.429463 | GCCATATCCTAGCCGAAACG | 58.571 | 55.000 | 0.00 | 0.00 | 0.00 | 3.60 |
4899 | 15285 | 1.005037 | TTGCGCCATATCCTAGCCG | 60.005 | 57.895 | 4.18 | 0.00 | 0.00 | 5.52 |
4902 | 15288 | 2.408050 | GTCAGTTGCGCCATATCCTAG | 58.592 | 52.381 | 4.18 | 0.00 | 0.00 | 3.02 |
4997 | 16181 | 2.340328 | GGCCGGATGTGTTTCCACC | 61.340 | 63.158 | 5.05 | 0.00 | 41.09 | 4.61 |
4998 | 16182 | 1.602323 | TGGCCGGATGTGTTTCCAC | 60.602 | 57.895 | 5.05 | 0.00 | 42.19 | 4.02 |
5051 | 17380 | 8.655901 | GGAAGGGAGAATGTTCTTATTCTATCT | 58.344 | 37.037 | 0.00 | 0.00 | 45.00 | 1.98 |
5107 | 17480 | 7.147320 | TGGGGAAACACATTGATATCAGATACT | 60.147 | 37.037 | 5.39 | 0.00 | 40.38 | 2.12 |
5196 | 17717 | 9.772973 | ACACAATCACATTTTGTAAGACTACTA | 57.227 | 29.630 | 0.00 | 0.00 | 35.61 | 1.82 |
5197 | 17718 | 8.677148 | ACACAATCACATTTTGTAAGACTACT | 57.323 | 30.769 | 0.00 | 0.00 | 35.61 | 2.57 |
5201 | 17722 | 6.475076 | TGCAACACAATCACATTTTGTAAGAC | 59.525 | 34.615 | 0.00 | 0.00 | 35.61 | 3.01 |
5222 | 17747 | 1.747325 | GCACCTTTGGGAAGCTGCAA | 61.747 | 55.000 | 1.02 | 0.00 | 41.83 | 4.08 |
5270 | 17795 | 3.257375 | TGTCGTATTGCTTGTAGTCCTGT | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
5672 | 18200 | 2.022240 | GCCAGTTTGGTCGGGCAAAA | 62.022 | 55.000 | 0.00 | 0.00 | 45.39 | 2.44 |
5771 | 18299 | 6.773976 | ATGGTACCAACAATTTGAGTATGG | 57.226 | 37.500 | 20.76 | 8.23 | 34.24 | 2.74 |
5781 | 18309 | 6.126883 | TGCTAGCTAGTTATGGTACCAACAAT | 60.127 | 38.462 | 20.76 | 10.23 | 0.00 | 2.71 |
5791 | 18319 | 3.249091 | CGAGCATGCTAGCTAGTTATGG | 58.751 | 50.000 | 22.74 | 15.34 | 46.75 | 2.74 |
5797 | 18325 | 0.676184 | TTCCCGAGCATGCTAGCTAG | 59.324 | 55.000 | 22.74 | 16.84 | 46.75 | 3.42 |
5798 | 18326 | 0.676184 | CTTCCCGAGCATGCTAGCTA | 59.324 | 55.000 | 22.74 | 8.21 | 46.75 | 3.32 |
5800 | 18328 | 0.389391 | TACTTCCCGAGCATGCTAGC | 59.611 | 55.000 | 22.74 | 8.10 | 0.00 | 3.42 |
5803 | 18331 | 1.264749 | TGGTACTTCCCGAGCATGCT | 61.265 | 55.000 | 22.92 | 22.92 | 34.77 | 3.79 |
5855 | 18397 | 0.516877 | ATTTCGACCATGCACGTGTG | 59.483 | 50.000 | 18.38 | 8.35 | 0.00 | 3.82 |
5882 | 18424 | 4.496010 | CGATATCGACTTTCACGGTCTCTT | 60.496 | 45.833 | 20.50 | 0.00 | 43.02 | 2.85 |
5911 | 18453 | 5.790593 | AGGAGAAGTCGTACAAGCATAAAA | 58.209 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
5916 | 18458 | 1.544691 | GGAGGAGAAGTCGTACAAGCA | 59.455 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
5981 | 18532 | 3.641906 | AGTTAGGCCATCGCTATACACTT | 59.358 | 43.478 | 5.01 | 0.00 | 34.44 | 3.16 |
5983 | 18534 | 3.662247 | AGTTAGGCCATCGCTATACAC | 57.338 | 47.619 | 5.01 | 0.00 | 34.44 | 2.90 |
5992 | 18544 | 5.835113 | TTTGCATAGAAAGTTAGGCCATC | 57.165 | 39.130 | 5.01 | 0.00 | 29.71 | 3.51 |
6009 | 18561 | 2.128507 | GTCCAACCCGGGTTTTGCA | 61.129 | 57.895 | 36.59 | 17.03 | 36.00 | 4.08 |
6011 | 18563 | 0.316841 | CATGTCCAACCCGGGTTTTG | 59.683 | 55.000 | 36.59 | 28.11 | 36.00 | 2.44 |
6013 | 18565 | 1.906333 | GCATGTCCAACCCGGGTTT | 60.906 | 57.895 | 36.59 | 19.30 | 36.00 | 3.27 |
6051 | 18608 | 3.472652 | TCAAGTTGAACGCATACACCTT | 58.527 | 40.909 | 2.20 | 0.00 | 0.00 | 3.50 |
6193 | 18751 | 7.573843 | GCATACCTATCATTTTGCATACCACTC | 60.574 | 40.741 | 0.00 | 0.00 | 0.00 | 3.51 |
6202 | 18760 | 4.916983 | TGTGGCATACCTATCATTTTGC | 57.083 | 40.909 | 0.00 | 0.00 | 36.63 | 3.68 |
6362 | 18929 | 9.579768 | GAATCTTATGTGTATATGCTACTGAGG | 57.420 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
6392 | 18959 | 2.159824 | GCATGAGCTCATCGATGGATTG | 59.840 | 50.000 | 26.44 | 14.38 | 37.91 | 2.67 |
6393 | 18960 | 2.424557 | GCATGAGCTCATCGATGGATT | 58.575 | 47.619 | 26.44 | 10.46 | 37.91 | 3.01 |
6520 | 19087 | 4.079253 | ACCCGACATGAGCAGTAATTTTT | 58.921 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
6521 | 19088 | 3.440173 | CACCCGACATGAGCAGTAATTTT | 59.560 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
6558 | 19125 | 6.664816 | AGAATATTTGAGGATGACTTTTGGCA | 59.335 | 34.615 | 0.00 | 0.00 | 44.56 | 4.92 |
6674 | 19241 | 5.648178 | GCTACTCCTATAGCCTTCTTACC | 57.352 | 47.826 | 0.00 | 0.00 | 41.55 | 2.85 |
6737 | 19304 | 7.979786 | ATCTACAACCCATTTCTCTTCTCTA | 57.020 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
6925 | 19493 | 8.620116 | ATGCTATGTGTGTGCATATATAACAA | 57.380 | 30.769 | 0.00 | 0.00 | 44.37 | 2.83 |
6931 | 19499 | 8.675705 | AAAGTAATGCTATGTGTGTGCATATA | 57.324 | 30.769 | 0.00 | 0.00 | 45.29 | 0.86 |
6932 | 19500 | 7.572523 | AAAGTAATGCTATGTGTGTGCATAT | 57.427 | 32.000 | 0.00 | 0.00 | 45.29 | 1.78 |
6933 | 19501 | 7.336679 | AGAAAAGTAATGCTATGTGTGTGCATA | 59.663 | 33.333 | 0.00 | 0.00 | 45.29 | 3.14 |
7076 | 19644 | 4.315803 | TCTCCTTGTGGAACTCGAATTTC | 58.684 | 43.478 | 0.00 | 0.00 | 42.66 | 2.17 |
7116 | 19684 | 1.312815 | ACTTCTTGTGGCTGAGTTGC | 58.687 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
7121 | 19689 | 3.281727 | AGAACAACTTCTTGTGGCTGA | 57.718 | 42.857 | 0.00 | 0.00 | 39.88 | 4.26 |
7138 | 19706 | 3.859411 | ACACACTTTCCGCAAAAAGAA | 57.141 | 38.095 | 13.19 | 0.00 | 38.30 | 2.52 |
7174 | 19745 | 8.784994 | CGCTCTACTCATAGGAATAAGAACTTA | 58.215 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
7185 | 19756 | 5.246429 | TGATCTAGTCGCTCTACTCATAGGA | 59.754 | 44.000 | 0.00 | 0.00 | 0.00 | 2.94 |
7187 | 19758 | 7.360861 | CCTTTGATCTAGTCGCTCTACTCATAG | 60.361 | 44.444 | 0.00 | 0.00 | 0.00 | 2.23 |
7248 | 19822 | 7.764901 | GTCCCTCTACTTTTCATAAGTACAAGG | 59.235 | 40.741 | 0.00 | 0.00 | 34.00 | 3.61 |
7590 | 20281 | 3.508845 | TTTCCTTGGAACTCTGAAGGG | 57.491 | 47.619 | 0.98 | 0.00 | 37.45 | 3.95 |
7606 | 20297 | 3.320626 | GAAGAGCAAAACAGGCATTTCC | 58.679 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
7678 | 20431 | 3.546020 | CCACGCGAAAGTAGCCATAAATG | 60.546 | 47.826 | 15.93 | 0.00 | 0.00 | 2.32 |
7891 | 20879 | 2.537143 | GAGACCCTCTTTGGAGTGGTA | 58.463 | 52.381 | 0.00 | 0.00 | 40.59 | 3.25 |
7933 | 21075 | 3.866703 | AGGAGAGGAGTGATGACGATA | 57.133 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
7981 | 21303 | 0.319641 | AAGTCGGAGTCGTTTGCTCC | 60.320 | 55.000 | 1.50 | 1.50 | 46.75 | 4.70 |
8105 | 21476 | 6.988622 | TTTGTCCTTTACTTTCTTCGTCAA | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
8116 | 21487 | 4.062991 | CGTGCCTAGTTTTGTCCTTTACT | 58.937 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
8117 | 21488 | 4.060205 | TCGTGCCTAGTTTTGTCCTTTAC | 58.940 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
8118 | 21489 | 4.060205 | GTCGTGCCTAGTTTTGTCCTTTA | 58.940 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
8119 | 21490 | 2.876550 | GTCGTGCCTAGTTTTGTCCTTT | 59.123 | 45.455 | 0.00 | 0.00 | 0.00 | 3.11 |
8199 | 21571 | 4.204028 | AAGCTGTTGCGGTGGGGT | 62.204 | 61.111 | 0.00 | 0.00 | 45.42 | 4.95 |
8204 | 21576 | 1.222115 | GAAGTCGAAGCTGTTGCGGT | 61.222 | 55.000 | 0.00 | 0.00 | 45.42 | 5.68 |
8225 | 21597 | 2.742053 | GTCCTCGATTTGTTTGCTGCTA | 59.258 | 45.455 | 0.00 | 0.00 | 0.00 | 3.49 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.