Multiple sequence alignment - TraesCS5A01G497900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G497900 chr5A 100.000 3107 0 0 1 3107 665442564 665445670 0.000000e+00 5738.0
1 TraesCS5A01G497900 chr5A 97.605 167 4 0 2165 2331 675526887 675527053 1.410000e-73 287.0
2 TraesCS5A01G497900 chr5A 96.532 173 5 1 2162 2333 690959228 690959400 5.070000e-73 285.0
3 TraesCS5A01G497900 chr5A 91.096 146 13 0 595 740 238837450 238837305 6.800000e-47 198.0
4 TraesCS5A01G497900 chr4B 95.256 1328 58 3 800 2126 616967225 616968548 0.000000e+00 2098.0
5 TraesCS5A01G497900 chr4B 89.130 460 28 11 2582 3025 616969034 616969487 1.260000e-153 553.0
6 TraesCS5A01G497900 chr4B 86.290 372 38 5 223 583 616957632 616958001 2.900000e-105 392.0
7 TraesCS5A01G497900 chr4B 83.986 281 8 7 2329 2585 616968700 616968967 5.180000e-58 235.0
8 TraesCS5A01G497900 chr4B 97.778 90 2 0 3018 3107 567354287 567354198 4.150000e-34 156.0
9 TraesCS5A01G497900 chr4B 100.000 34 0 0 2131 2164 616968663 616968696 2.590000e-06 63.9
10 TraesCS5A01G497900 chr4D 94.626 1135 43 3 995 2126 484620688 484621807 0.000000e+00 1742.0
11 TraesCS5A01G497900 chr4D 91.031 446 20 10 2598 3025 484624751 484625194 4.460000e-163 584.0
12 TraesCS5A01G497900 chr4D 85.533 394 35 14 223 596 484616528 484616919 2.900000e-105 392.0
13 TraesCS5A01G497900 chr4D 91.765 255 8 5 2330 2584 484624436 484624677 2.970000e-90 342.0
14 TraesCS5A01G497900 chr4D 90.588 255 11 3 2329 2583 250701551 250701792 2.990000e-85 326.0
15 TraesCS5A01G497900 chr4D 89.453 256 14 3 2329 2584 250766546 250766788 8.370000e-81 311.0
16 TraesCS5A01G497900 chr4D 93.011 186 12 1 800 985 484620055 484620239 1.420000e-68 270.0
17 TraesCS5A01G497900 chr4D 89.209 139 14 1 90 227 484616310 484616448 4.120000e-39 172.0
18 TraesCS5A01G497900 chr3D 86.584 1051 115 15 1069 2100 21793036 21794079 0.000000e+00 1136.0
19 TraesCS5A01G497900 chr3D 85.742 1017 134 6 1068 2081 21888415 21889423 0.000000e+00 1064.0
20 TraesCS5A01G497900 chr3D 89.844 256 13 3 2329 2584 245677536 245677294 1.800000e-82 316.0
21 TraesCS5A01G497900 chr3D 88.716 257 15 4 2329 2585 499434958 499434716 5.040000e-78 302.0
22 TraesCS5A01G497900 chr3D 90.972 144 13 0 595 738 478082939 478083082 8.790000e-46 195.0
23 TraesCS5A01G497900 chr3D 88.710 62 4 3 2598 2658 245677220 245677161 4.300000e-09 73.1
24 TraesCS5A01G497900 chr3B 86.122 1052 120 15 1068 2100 37970718 37971762 0.000000e+00 1110.0
25 TraesCS5A01G497900 chr3B 97.674 172 2 2 2156 2327 520150016 520149847 8.430000e-76 294.0
26 TraesCS5A01G497900 chr3B 98.204 167 2 1 2163 2329 486371126 486371291 1.090000e-74 291.0
27 TraesCS5A01G497900 chr3B 97.647 170 3 1 2158 2327 731267208 731267040 1.090000e-74 291.0
28 TraesCS5A01G497900 chr3B 97.605 167 4 0 2165 2331 256781474 256781308 1.410000e-73 287.0
29 TraesCS5A01G497900 chr3B 85.714 175 22 2 424 596 720955068 720955241 6.840000e-42 182.0
30 TraesCS5A01G497900 chr3B 98.876 89 1 0 3019 3107 433645586 433645498 3.210000e-35 159.0
31 TraesCS5A01G497900 chr3A 86.174 1056 112 23 1068 2100 31559186 31560230 0.000000e+00 1110.0
32 TraesCS5A01G497900 chr3A 85.644 1010 135 5 1068 2075 31603483 31604484 0.000000e+00 1053.0
33 TraesCS5A01G497900 chr3A 96.023 176 6 1 2164 2338 618872386 618872561 5.070000e-73 285.0
34 TraesCS5A01G497900 chr3A 98.990 99 1 0 1 99 43450176 43450274 8.850000e-41 178.0
35 TraesCS5A01G497900 chr3A 98.990 99 1 0 1 99 44034459 44034557 8.850000e-41 178.0
36 TraesCS5A01G497900 chr3A 100.000 87 0 0 3021 3107 342978284 342978370 8.920000e-36 161.0
37 TraesCS5A01G497900 chrUn 84.372 1011 134 12 1071 2078 336370761 336369772 0.000000e+00 970.0
38 TraesCS5A01G497900 chrUn 84.273 1011 135 12 1071 2078 336373427 336372438 0.000000e+00 965.0
39 TraesCS5A01G497900 chrUn 90.411 146 14 0 595 740 45126974 45127119 3.160000e-45 193.0
40 TraesCS5A01G497900 chrUn 90.411 146 14 0 595 740 86494169 86494314 3.160000e-45 193.0
41 TraesCS5A01G497900 chrUn 90.411 146 14 0 595 740 186175302 186175157 3.160000e-45 193.0
42 TraesCS5A01G497900 chrUn 97.087 103 1 2 1 102 151418327 151418428 4.120000e-39 172.0
43 TraesCS5A01G497900 chrUn 98.876 89 1 0 3019 3107 71293455 71293543 3.210000e-35 159.0
44 TraesCS5A01G497900 chr2D 90.588 255 11 5 2329 2583 330426909 330427150 2.990000e-85 326.0
45 TraesCS5A01G497900 chr2D 88.710 62 4 3 2598 2658 330427225 330427284 4.300000e-09 73.1
46 TraesCS5A01G497900 chr2A 98.788 165 2 0 2163 2327 632622110 632622274 8.430000e-76 294.0
47 TraesCS5A01G497900 chr2A 98.193 166 3 0 2166 2331 113822458 113822293 1.090000e-74 291.0
48 TraesCS5A01G497900 chr2A 95.495 111 2 3 1 108 31808134 31808244 1.150000e-39 174.0
49 TraesCS5A01G497900 chr2A 94.690 113 3 3 1 111 721939481 721939370 4.120000e-39 172.0
50 TraesCS5A01G497900 chr2A 98.876 89 1 0 3019 3107 175227671 175227583 3.210000e-35 159.0
51 TraesCS5A01G497900 chr2A 98.876 89 1 0 3019 3107 206444152 206444064 3.210000e-35 159.0
52 TraesCS5A01G497900 chr2A 98.876 89 1 0 3019 3107 477947459 477947371 3.210000e-35 159.0
53 TraesCS5A01G497900 chr1B 97.110 173 4 1 2155 2327 67053875 67054046 1.090000e-74 291.0
54 TraesCS5A01G497900 chr1B 94.944 178 7 2 2155 2331 481299534 481299710 8.490000e-71 278.0
55 TraesCS5A01G497900 chr1B 98.913 92 1 0 3016 3107 297475507 297475598 6.890000e-37 165.0
56 TraesCS5A01G497900 chr7B 96.045 177 5 2 2158 2333 657551554 657551379 1.410000e-73 287.0
57 TraesCS5A01G497900 chr7B 90.972 144 13 0 597 740 115174241 115174098 8.790000e-46 195.0
58 TraesCS5A01G497900 chr5B 96.023 176 7 0 2156 2331 709856462 709856637 1.410000e-73 287.0
59 TraesCS5A01G497900 chr5B 97.059 170 4 1 2162 2331 578078559 578078727 5.070000e-73 285.0
60 TraesCS5A01G497900 chr5B 91.096 146 13 0 595 740 130625883 130625738 6.800000e-47 198.0
61 TraesCS5A01G497900 chr1A 92.466 146 11 0 595 740 94698885 94698740 3.140000e-50 209.0
62 TraesCS5A01G497900 chr1A 95.413 109 5 0 1 109 11368381 11368273 1.150000e-39 174.0
63 TraesCS5A01G497900 chr1D 91.096 146 13 0 595 740 351095703 351095558 6.800000e-47 198.0
64 TraesCS5A01G497900 chr4A 96.190 105 4 0 1 105 428394193 428394297 4.120000e-39 172.0
65 TraesCS5A01G497900 chr4A 95.370 108 4 1 1 108 584906897 584906791 1.480000e-38 171.0
66 TraesCS5A01G497900 chr4A 80.282 142 26 2 882 1021 426335270 426335411 4.240000e-19 106.0
67 TraesCS5A01G497900 chr7A 93.860 114 3 4 1 111 521985727 521985839 5.330000e-38 169.0
68 TraesCS5A01G497900 chr7A 88.028 142 14 2 429 568 116004282 116004422 6.890000e-37 165.0
69 TraesCS5A01G497900 chr6A 98.876 89 1 0 3019 3107 510214465 510214553 3.210000e-35 159.0
70 TraesCS5A01G497900 chr6A 77.348 181 23 12 220 385 26720328 26720505 1.190000e-14 91.6
71 TraesCS5A01G497900 chr6A 96.226 53 2 0 223 275 40220988 40220936 1.530000e-13 87.9
72 TraesCS5A01G497900 chr6A 100.000 28 0 0 744 771 1029130 1029157 6.000000e-03 52.8
73 TraesCS5A01G497900 chr6A 96.774 31 1 0 744 774 40220334 40220304 6.000000e-03 52.8
74 TraesCS5A01G497900 chr6D 100.000 28 0 0 744 771 1589742 1589715 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G497900 chr5A 665442564 665445670 3106 False 5738.000000 5738 100.0000 1 3107 1 chr5A.!!$F1 3106
1 TraesCS5A01G497900 chr4B 616967225 616969487 2262 False 737.475000 2098 92.0930 800 3025 4 chr4B.!!$F2 2225
2 TraesCS5A01G497900 chr4D 484616310 484625194 8884 False 583.666667 1742 90.8625 90 3025 6 chr4D.!!$F3 2935
3 TraesCS5A01G497900 chr3D 21793036 21794079 1043 False 1136.000000 1136 86.5840 1069 2100 1 chr3D.!!$F1 1031
4 TraesCS5A01G497900 chr3D 21888415 21889423 1008 False 1064.000000 1064 85.7420 1068 2081 1 chr3D.!!$F2 1013
5 TraesCS5A01G497900 chr3B 37970718 37971762 1044 False 1110.000000 1110 86.1220 1068 2100 1 chr3B.!!$F1 1032
6 TraesCS5A01G497900 chr3A 31559186 31560230 1044 False 1110.000000 1110 86.1740 1068 2100 1 chr3A.!!$F1 1032
7 TraesCS5A01G497900 chr3A 31603483 31604484 1001 False 1053.000000 1053 85.6440 1068 2075 1 chr3A.!!$F2 1007
8 TraesCS5A01G497900 chrUn 336369772 336373427 3655 True 967.500000 970 84.3225 1071 2078 2 chrUn.!!$R2 1007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
722 828 0.036671 AGGTTTTAGCCCTCCGTTCG 60.037 55.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2314 11200 0.322546 AACATTGCTCCCTCCGTTCC 60.323 55.0 0.0 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 7.530426 AATGCTTTTATTATTGCCTCTAGGG 57.470 36.000 0.00 0.00 35.18 3.53
88 89 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
162 163 7.302350 TGACGATACCAACTATTCAAACATG 57.698 36.000 0.00 0.00 0.00 3.21
163 164 7.100409 TGACGATACCAACTATTCAAACATGA 58.900 34.615 0.00 0.00 0.00 3.07
171 172 8.090214 ACCAACTATTCAAACATGAGGAAAATG 58.910 33.333 0.00 0.00 0.00 2.32
179 180 3.993920 ACATGAGGAAAATGGTGTTTGC 58.006 40.909 0.00 0.00 0.00 3.68
190 191 6.839124 AAATGGTGTTTGCAATCTCTATCA 57.161 33.333 0.00 0.00 0.00 2.15
191 192 6.839124 AATGGTGTTTGCAATCTCTATCAA 57.161 33.333 0.00 0.00 0.00 2.57
192 193 5.885230 TGGTGTTTGCAATCTCTATCAAG 57.115 39.130 0.00 0.00 0.00 3.02
226 312 9.793259 TTACTCATTGAAAGTTTTATCTCCACT 57.207 29.630 0.00 0.00 0.00 4.00
257 343 8.218338 AGTCAGGATGTATTTCATGATTCAAC 57.782 34.615 0.00 0.00 38.53 3.18
262 348 8.636213 AGGATGTATTTCATGATTCAACAATCC 58.364 33.333 0.00 4.47 38.14 3.01
341 446 1.134699 GCACCTCATCATCTCCAACGA 60.135 52.381 0.00 0.00 0.00 3.85
343 448 1.482593 ACCTCATCATCTCCAACGACC 59.517 52.381 0.00 0.00 0.00 4.79
386 492 3.821600 TCTTAAATGCAGCCCGTTGTTTA 59.178 39.130 0.00 0.00 0.00 2.01
411 517 1.133606 TCCTTTCTTTTTGCGGGGAGT 60.134 47.619 0.00 0.00 0.00 3.85
416 522 2.104170 TCTTTTTGCGGGGAGTTGTTT 58.896 42.857 0.00 0.00 0.00 2.83
419 525 1.028905 TTTGCGGGGAGTTGTTTCTG 58.971 50.000 0.00 0.00 0.00 3.02
422 528 1.949257 CGGGGAGTTGTTTCTGTGC 59.051 57.895 0.00 0.00 0.00 4.57
432 538 3.159213 TGTTTCTGTGCCCTTGATCAT 57.841 42.857 0.00 0.00 0.00 2.45
447 553 7.095910 CCCTTGATCATATCTTGCTAGTACTG 58.904 42.308 5.39 0.00 0.00 2.74
458 564 6.075315 TCTTGCTAGTACTGGCCATCTAATA 58.925 40.000 26.23 4.23 36.12 0.98
484 590 9.764363 ATTTTAGTTGGAGAAAATTGGAAGTTC 57.236 29.630 0.00 0.00 32.60 3.01
488 594 4.465886 TGGAGAAAATTGGAAGTTCGGAA 58.534 39.130 0.00 0.00 0.00 4.30
509 615 9.004717 TCGGAAAATTGATTGTGTGATTAACTA 57.995 29.630 0.00 0.00 0.00 2.24
539 645 7.876068 CCTTCAAGGTTGTGTTTCTGTAGTATA 59.124 37.037 0.00 0.00 0.00 1.47
571 677 4.666908 CGACGAAAGAAAGAGCTTAAAGCC 60.667 45.833 0.00 0.00 43.77 4.35
573 679 3.432252 CGAAAGAAAGAGCTTAAAGCCGA 59.568 43.478 0.00 0.00 43.77 5.54
586 692 6.651225 AGCTTAAAGCCGAAGATATGGTAATC 59.349 38.462 0.00 0.00 43.77 1.75
588 694 3.594603 AGCCGAAGATATGGTAATCCG 57.405 47.619 0.00 0.00 36.30 4.18
594 700 7.069578 AGCCGAAGATATGGTAATCCGTATTAT 59.930 37.037 1.31 0.00 43.60 1.28
595 701 7.381678 GCCGAAGATATGGTAATCCGTATTATC 59.618 40.741 1.31 0.00 43.60 1.75
596 702 8.630917 CCGAAGATATGGTAATCCGTATTATCT 58.369 37.037 1.31 0.00 43.60 1.98
605 711 9.893634 TGGTAATCCGTATTATCTTTTTCTTCA 57.106 29.630 0.00 0.00 36.30 3.02
609 715 9.462606 AATCCGTATTATCTTTTTCTTCACCTT 57.537 29.630 0.00 0.00 0.00 3.50
610 716 8.857694 TCCGTATTATCTTTTTCTTCACCTTT 57.142 30.769 0.00 0.00 0.00 3.11
611 717 9.947433 TCCGTATTATCTTTTTCTTCACCTTTA 57.053 29.630 0.00 0.00 0.00 1.85
626 732 4.618920 ACCTTTAGTGAGAAATCCGTGT 57.381 40.909 0.00 0.00 0.00 4.49
627 733 4.566987 ACCTTTAGTGAGAAATCCGTGTC 58.433 43.478 0.00 0.00 0.00 3.67
628 734 3.933332 CCTTTAGTGAGAAATCCGTGTCC 59.067 47.826 0.00 0.00 0.00 4.02
629 735 2.933495 TAGTGAGAAATCCGTGTCCG 57.067 50.000 0.00 0.00 0.00 4.79
630 736 0.389948 AGTGAGAAATCCGTGTCCGC 60.390 55.000 0.00 0.00 0.00 5.54
631 737 1.079405 TGAGAAATCCGTGTCCGCC 60.079 57.895 0.00 0.00 0.00 6.13
632 738 1.814169 GAGAAATCCGTGTCCGCCC 60.814 63.158 0.00 0.00 0.00 6.13
633 739 2.822701 GAAATCCGTGTCCGCCCC 60.823 66.667 0.00 0.00 0.00 5.80
634 740 3.615509 GAAATCCGTGTCCGCCCCA 62.616 63.158 0.00 0.00 0.00 4.96
635 741 3.622060 AAATCCGTGTCCGCCCCAG 62.622 63.158 0.00 0.00 0.00 4.45
640 746 4.329545 GTGTCCGCCCCAGCAAGA 62.330 66.667 0.00 0.00 39.83 3.02
641 747 3.565214 TGTCCGCCCCAGCAAGAA 61.565 61.111 0.00 0.00 39.83 2.52
642 748 2.282180 GTCCGCCCCAGCAAGAAA 60.282 61.111 0.00 0.00 39.83 2.52
643 749 1.901464 GTCCGCCCCAGCAAGAAAA 60.901 57.895 0.00 0.00 39.83 2.29
644 750 1.901464 TCCGCCCCAGCAAGAAAAC 60.901 57.895 0.00 0.00 39.83 2.43
645 751 2.199652 CCGCCCCAGCAAGAAAACA 61.200 57.895 0.00 0.00 39.83 2.83
646 752 1.535204 CCGCCCCAGCAAGAAAACAT 61.535 55.000 0.00 0.00 39.83 2.71
647 753 1.173043 CGCCCCAGCAAGAAAACATA 58.827 50.000 0.00 0.00 39.83 2.29
648 754 1.750778 CGCCCCAGCAAGAAAACATAT 59.249 47.619 0.00 0.00 39.83 1.78
649 755 2.480073 CGCCCCAGCAAGAAAACATATG 60.480 50.000 0.00 0.00 39.83 1.78
650 756 2.497273 GCCCCAGCAAGAAAACATATGT 59.503 45.455 1.41 1.41 39.53 2.29
651 757 3.676873 GCCCCAGCAAGAAAACATATGTG 60.677 47.826 9.63 0.00 39.53 3.21
652 758 3.514645 CCCAGCAAGAAAACATATGTGC 58.485 45.455 9.63 7.37 0.00 4.57
653 759 3.173599 CCAGCAAGAAAACATATGTGCG 58.826 45.455 9.63 4.30 37.09 5.34
654 760 3.366273 CCAGCAAGAAAACATATGTGCGT 60.366 43.478 9.63 0.00 37.09 5.24
655 761 3.605056 CAGCAAGAAAACATATGTGCGTG 59.395 43.478 9.63 11.25 37.09 5.34
656 762 3.253188 AGCAAGAAAACATATGTGCGTGT 59.747 39.130 9.63 0.00 37.09 4.49
657 763 4.454161 AGCAAGAAAACATATGTGCGTGTA 59.546 37.500 9.63 0.00 37.09 2.90
658 764 4.553429 GCAAGAAAACATATGTGCGTGTAC 59.447 41.667 9.63 0.00 0.00 2.90
659 765 5.684850 CAAGAAAACATATGTGCGTGTACA 58.315 37.500 9.63 0.00 34.63 2.90
660 766 5.530519 AGAAAACATATGTGCGTGTACAG 57.469 39.130 9.63 0.00 33.44 2.74
661 767 5.234752 AGAAAACATATGTGCGTGTACAGA 58.765 37.500 9.63 0.00 33.44 3.41
662 768 5.699001 AGAAAACATATGTGCGTGTACAGAA 59.301 36.000 9.63 0.00 33.44 3.02
663 769 5.530519 AAACATATGTGCGTGTACAGAAG 57.469 39.130 9.63 0.00 33.44 2.85
664 770 2.930040 ACATATGTGCGTGTACAGAAGC 59.070 45.455 7.78 3.18 33.44 3.86
665 771 2.734276 TATGTGCGTGTACAGAAGCA 57.266 45.000 14.30 14.30 37.26 3.91
668 774 3.371087 TGCGTGTACAGAAGCACAA 57.629 47.368 14.30 0.00 35.51 3.33
669 775 0.934496 TGCGTGTACAGAAGCACAAC 59.066 50.000 14.30 0.00 35.51 3.32
670 776 0.934496 GCGTGTACAGAAGCACAACA 59.066 50.000 11.60 0.00 35.51 3.33
671 777 1.329292 GCGTGTACAGAAGCACAACAA 59.671 47.619 11.60 0.00 35.51 2.83
672 778 2.849502 GCGTGTACAGAAGCACAACAAC 60.850 50.000 11.60 0.00 35.51 3.32
673 779 2.607635 CGTGTACAGAAGCACAACAACT 59.392 45.455 0.00 0.00 35.51 3.16
674 780 3.063452 CGTGTACAGAAGCACAACAACTT 59.937 43.478 0.00 0.00 35.51 2.66
675 781 4.436852 CGTGTACAGAAGCACAACAACTTT 60.437 41.667 0.00 0.00 35.51 2.66
676 782 5.028375 GTGTACAGAAGCACAACAACTTTC 58.972 41.667 0.00 0.00 35.81 2.62
677 783 4.697828 TGTACAGAAGCACAACAACTTTCA 59.302 37.500 0.00 0.00 0.00 2.69
678 784 4.096732 ACAGAAGCACAACAACTTTCAC 57.903 40.909 0.00 0.00 0.00 3.18
679 785 3.100817 CAGAAGCACAACAACTTTCACG 58.899 45.455 0.00 0.00 0.00 4.35
680 786 1.846175 GAAGCACAACAACTTTCACGC 59.154 47.619 0.00 0.00 0.00 5.34
681 787 1.094785 AGCACAACAACTTTCACGCT 58.905 45.000 0.00 0.00 0.00 5.07
682 788 1.064060 AGCACAACAACTTTCACGCTC 59.936 47.619 0.00 0.00 0.00 5.03
683 789 1.202132 GCACAACAACTTTCACGCTCA 60.202 47.619 0.00 0.00 0.00 4.26
684 790 2.541588 GCACAACAACTTTCACGCTCAT 60.542 45.455 0.00 0.00 0.00 2.90
685 791 3.694734 CACAACAACTTTCACGCTCATT 58.305 40.909 0.00 0.00 0.00 2.57
686 792 3.725740 CACAACAACTTTCACGCTCATTC 59.274 43.478 0.00 0.00 0.00 2.67
687 793 3.243068 ACAACAACTTTCACGCTCATTCC 60.243 43.478 0.00 0.00 0.00 3.01
688 794 2.851195 ACAACTTTCACGCTCATTCCT 58.149 42.857 0.00 0.00 0.00 3.36
689 795 3.214328 ACAACTTTCACGCTCATTCCTT 58.786 40.909 0.00 0.00 0.00 3.36
690 796 4.385825 ACAACTTTCACGCTCATTCCTTA 58.614 39.130 0.00 0.00 0.00 2.69
691 797 4.213482 ACAACTTTCACGCTCATTCCTTAC 59.787 41.667 0.00 0.00 0.00 2.34
692 798 4.273148 ACTTTCACGCTCATTCCTTACT 57.727 40.909 0.00 0.00 0.00 2.24
693 799 4.246458 ACTTTCACGCTCATTCCTTACTC 58.754 43.478 0.00 0.00 0.00 2.59
694 800 2.961526 TCACGCTCATTCCTTACTCC 57.038 50.000 0.00 0.00 0.00 3.85
695 801 2.176045 TCACGCTCATTCCTTACTCCA 58.824 47.619 0.00 0.00 0.00 3.86
696 802 2.565391 TCACGCTCATTCCTTACTCCAA 59.435 45.455 0.00 0.00 0.00 3.53
697 803 3.007506 TCACGCTCATTCCTTACTCCAAA 59.992 43.478 0.00 0.00 0.00 3.28
698 804 3.751175 CACGCTCATTCCTTACTCCAAAA 59.249 43.478 0.00 0.00 0.00 2.44
699 805 3.751698 ACGCTCATTCCTTACTCCAAAAC 59.248 43.478 0.00 0.00 0.00 2.43
700 806 4.003648 CGCTCATTCCTTACTCCAAAACT 58.996 43.478 0.00 0.00 0.00 2.66
701 807 5.175859 CGCTCATTCCTTACTCCAAAACTA 58.824 41.667 0.00 0.00 0.00 2.24
702 808 5.817816 CGCTCATTCCTTACTCCAAAACTAT 59.182 40.000 0.00 0.00 0.00 2.12
703 809 6.984474 CGCTCATTCCTTACTCCAAAACTATA 59.016 38.462 0.00 0.00 0.00 1.31
704 810 7.169982 CGCTCATTCCTTACTCCAAAACTATAG 59.830 40.741 0.00 0.00 0.00 1.31
705 811 7.442666 GCTCATTCCTTACTCCAAAACTATAGG 59.557 40.741 4.43 0.00 0.00 2.57
706 812 8.388656 TCATTCCTTACTCCAAAACTATAGGT 57.611 34.615 4.43 0.00 0.00 3.08
707 813 8.832735 TCATTCCTTACTCCAAAACTATAGGTT 58.167 33.333 4.43 0.00 40.28 3.50
718 824 4.684484 AACTATAGGTTTTAGCCCTCCG 57.316 45.455 4.43 0.00 33.90 4.63
719 825 3.650948 ACTATAGGTTTTAGCCCTCCGT 58.349 45.455 4.43 0.00 33.35 4.69
720 826 4.035814 ACTATAGGTTTTAGCCCTCCGTT 58.964 43.478 4.43 0.00 33.35 4.44
721 827 3.555527 ATAGGTTTTAGCCCTCCGTTC 57.444 47.619 0.00 0.00 33.35 3.95
722 828 0.036671 AGGTTTTAGCCCTCCGTTCG 60.037 55.000 0.00 0.00 0.00 3.95
723 829 1.642037 GGTTTTAGCCCTCCGTTCGC 61.642 60.000 0.00 0.00 0.00 4.70
724 830 0.672711 GTTTTAGCCCTCCGTTCGCT 60.673 55.000 0.00 0.00 36.63 4.93
725 831 0.672401 TTTTAGCCCTCCGTTCGCTG 60.672 55.000 0.00 0.00 34.03 5.18
726 832 2.515996 TTTAGCCCTCCGTTCGCTGG 62.516 60.000 0.00 0.00 34.03 4.85
729 835 4.796231 CCCTCCGTTCGCTGGTCG 62.796 72.222 0.00 0.00 40.15 4.79
734 840 3.342627 CGTTCGCTGGTCGCCAAA 61.343 61.111 0.35 0.00 38.27 3.28
735 841 2.556287 GTTCGCTGGTCGCCAAAG 59.444 61.111 0.35 0.00 38.27 2.77
736 842 1.959226 GTTCGCTGGTCGCCAAAGA 60.959 57.895 0.35 0.74 38.27 2.52
737 843 1.959226 TTCGCTGGTCGCCAAAGAC 60.959 57.895 0.35 0.00 40.25 3.01
738 844 3.777925 CGCTGGTCGCCAAAGACG 61.778 66.667 0.35 0.00 41.81 4.18
739 845 2.357034 GCTGGTCGCCAAAGACGA 60.357 61.111 0.00 0.00 41.81 4.20
740 846 1.741770 GCTGGTCGCCAAAGACGAT 60.742 57.895 0.00 0.00 42.26 3.73
741 847 0.459585 GCTGGTCGCCAAAGACGATA 60.460 55.000 0.00 0.00 42.26 2.92
742 848 1.278238 CTGGTCGCCAAAGACGATAC 58.722 55.000 0.00 0.00 42.26 2.24
752 858 4.759782 CCAAAGACGATACTCAACCATCT 58.240 43.478 0.00 0.00 0.00 2.90
773 3852 6.724893 TCTGACCCTAATCATGTAATCGAA 57.275 37.500 0.00 0.00 0.00 3.71
777 3856 5.542779 ACCCTAATCATGTAATCGAAGCTC 58.457 41.667 0.00 0.00 0.00 4.09
781 3860 1.064952 TCATGTAATCGAAGCTCGCGA 59.935 47.619 9.26 9.26 40.21 5.87
809 3996 1.145803 GCCCCGCTCGTTCATATTAC 58.854 55.000 0.00 0.00 0.00 1.89
823 4010 6.531439 GTTCATATTACACGTGAAACTGTCC 58.469 40.000 25.01 0.00 34.04 4.02
829 4016 3.719924 ACACGTGAAACTGTCCGAAATA 58.280 40.909 25.01 0.00 31.75 1.40
859 4046 6.060028 TGTTAGCAATTCAACACTCAGTTC 57.940 37.500 0.00 0.00 38.74 3.01
867 4054 7.524912 CAATTCAACACTCAGTTCCAATCTAG 58.475 38.462 0.00 0.00 38.74 2.43
941 4128 5.986501 ATCTCAGAAAAGAACTAGACGGT 57.013 39.130 0.00 0.00 0.00 4.83
963 4151 6.625740 CGGTGGATTTTATGAGCAGTTGATTT 60.626 38.462 0.00 0.00 0.00 2.17
965 4153 7.063780 GGTGGATTTTATGAGCAGTTGATTTTG 59.936 37.037 0.00 0.00 0.00 2.44
966 4154 7.599998 GTGGATTTTATGAGCAGTTGATTTTGT 59.400 33.333 0.00 0.00 0.00 2.83
980 4168 4.155709 TGATTTTGTGGGCAGATTACCAA 58.844 39.130 0.00 0.00 38.73 3.67
1014 4641 5.592795 TGAAGAATCATGGGGGAAAAGAAT 58.407 37.500 0.00 0.00 0.00 2.40
1029 4656 2.143876 AGAATTGGCCCATACACACC 57.856 50.000 0.00 0.00 0.00 4.16
1037 4664 1.549037 GCCCATACACACCCTCCAAAA 60.549 52.381 0.00 0.00 0.00 2.44
1083 4710 0.319297 GCCAAGCCACAGAAAAGCAG 60.319 55.000 0.00 0.00 0.00 4.24
1107 4734 0.108207 CCATGGGACTGCAGATCCTC 59.892 60.000 23.35 16.05 36.40 3.71
1515 5145 2.278857 ATCGTCGACATGCTCCGC 60.279 61.111 17.16 0.00 0.00 5.54
1943 5573 5.419155 TCTTCATCGACTACAAGAAGACCAT 59.581 40.000 0.00 0.00 39.60 3.55
1949 5579 2.271800 CTACAAGAAGACCATGACGGC 58.728 52.381 0.00 0.00 39.03 5.68
1953 8249 1.215647 GAAGACCATGACGGCGAGT 59.784 57.895 16.62 2.05 39.03 4.18
1999 8298 0.467290 GGTGGTGGAGACAGGCAAAA 60.467 55.000 0.00 0.00 44.46 2.44
2005 8304 2.810852 GTGGAGACAGGCAAAAGAGAAG 59.189 50.000 0.00 0.00 44.46 2.85
2012 8311 1.145738 AGGCAAAAGAGAAGAAGCCCA 59.854 47.619 0.00 0.00 42.97 5.36
2100 8399 2.229784 GGAGTTGTTCAAGAGGCAATGG 59.770 50.000 0.00 0.00 0.00 3.16
2105 8404 3.429492 TGTTCAAGAGGCAATGGCATTA 58.571 40.909 13.23 0.00 43.71 1.90
2115 8414 2.549754 GCAATGGCATTAGCGAGTATGT 59.450 45.455 13.23 0.00 43.41 2.29
2126 8425 2.621055 AGCGAGTATGTTTGGTTTTGCA 59.379 40.909 0.00 0.00 0.00 4.08
2127 8426 2.979813 GCGAGTATGTTTGGTTTTGCAG 59.020 45.455 0.00 0.00 0.00 4.41
2129 8428 3.304659 CGAGTATGTTTGGTTTTGCAGCT 60.305 43.478 0.00 0.00 0.00 4.24
2164 11050 7.814264 TGCTAAACCAGTAGGAGTACTATAC 57.186 40.000 0.00 2.36 37.40 1.47
2167 11053 8.998377 GCTAAACCAGTAGGAGTACTATACTAC 58.002 40.741 16.14 16.93 37.40 2.73
2176 11062 5.482163 GAGTACTATACTACTCCCTCCGT 57.518 47.826 0.00 0.00 39.59 4.69
2177 11063 5.863965 GAGTACTATACTACTCCCTCCGTT 58.136 45.833 0.00 0.00 39.59 4.44
2178 11064 5.863965 AGTACTATACTACTCCCTCCGTTC 58.136 45.833 0.00 0.00 37.23 3.95
2179 11065 4.097551 ACTATACTACTCCCTCCGTTCC 57.902 50.000 0.00 0.00 0.00 3.62
2180 11066 2.378378 ATACTACTCCCTCCGTTCCC 57.622 55.000 0.00 0.00 0.00 3.97
2181 11067 1.002069 TACTACTCCCTCCGTTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
2182 11068 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
2183 11069 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
2184 11070 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
2185 11071 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2186 11072 1.558294 ACTCCCTCCGTTCCCAAATAC 59.442 52.381 0.00 0.00 0.00 1.89
2187 11073 1.838077 CTCCCTCCGTTCCCAAATACT 59.162 52.381 0.00 0.00 0.00 2.12
2188 11074 2.238898 CTCCCTCCGTTCCCAAATACTT 59.761 50.000 0.00 0.00 0.00 2.24
2189 11075 2.026636 TCCCTCCGTTCCCAAATACTTG 60.027 50.000 0.00 0.00 0.00 3.16
2190 11076 2.290705 CCCTCCGTTCCCAAATACTTGT 60.291 50.000 0.00 0.00 0.00 3.16
2191 11077 3.007635 CCTCCGTTCCCAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
2192 11078 3.307480 CCTCCGTTCCCAAATACTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2193 11079 4.324267 CTCCGTTCCCAAATACTTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
2194 11080 4.721132 TCCGTTCCCAAATACTTGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
2195 11081 4.758165 TCCGTTCCCAAATACTTGTCTTTC 59.242 41.667 0.00 0.00 0.00 2.62
2196 11082 4.760204 CCGTTCCCAAATACTTGTCTTTCT 59.240 41.667 0.00 0.00 0.00 2.52
2197 11083 5.935789 CCGTTCCCAAATACTTGTCTTTCTA 59.064 40.000 0.00 0.00 0.00 2.10
2198 11084 6.092259 CCGTTCCCAAATACTTGTCTTTCTAG 59.908 42.308 0.00 0.00 0.00 2.43
2199 11085 6.092259 CGTTCCCAAATACTTGTCTTTCTAGG 59.908 42.308 0.00 0.00 0.00 3.02
2200 11086 5.497474 TCCCAAATACTTGTCTTTCTAGGC 58.503 41.667 0.00 0.00 0.00 3.93
2201 11087 5.013704 TCCCAAATACTTGTCTTTCTAGGCA 59.986 40.000 0.00 0.00 33.22 4.75
2202 11088 5.888161 CCCAAATACTTGTCTTTCTAGGCAT 59.112 40.000 0.00 0.00 35.56 4.40
2203 11089 6.378280 CCCAAATACTTGTCTTTCTAGGCATT 59.622 38.462 0.00 0.00 35.56 3.56
2204 11090 7.093771 CCCAAATACTTGTCTTTCTAGGCATTT 60.094 37.037 0.00 0.00 35.56 2.32
2205 11091 7.970614 CCAAATACTTGTCTTTCTAGGCATTTC 59.029 37.037 0.00 0.00 35.56 2.17
2206 11092 8.514594 CAAATACTTGTCTTTCTAGGCATTTCA 58.485 33.333 0.00 0.00 35.56 2.69
2207 11093 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
2208 11094 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
2209 11095 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
2210 11096 7.373493 ACTTGTCTTTCTAGGCATTTCAAATG 58.627 34.615 5.68 5.68 35.56 2.32
2211 11097 7.231317 ACTTGTCTTTCTAGGCATTTCAAATGA 59.769 33.333 14.65 0.00 35.56 2.57
2212 11098 7.523293 TGTCTTTCTAGGCATTTCAAATGAA 57.477 32.000 14.65 0.00 29.10 2.57
2213 11099 7.370383 TGTCTTTCTAGGCATTTCAAATGAAC 58.630 34.615 14.65 5.78 29.10 3.18
2214 11100 7.231317 TGTCTTTCTAGGCATTTCAAATGAACT 59.769 33.333 14.65 12.60 29.10 3.01
2215 11101 7.752686 GTCTTTCTAGGCATTTCAAATGAACTC 59.247 37.037 14.65 0.37 33.13 3.01
2216 11102 7.448161 TCTTTCTAGGCATTTCAAATGAACTCA 59.552 33.333 14.65 0.00 33.13 3.41
2217 11103 7.523293 TTCTAGGCATTTCAAATGAACTCAA 57.477 32.000 14.65 5.25 33.13 3.02
2218 11104 6.913170 TCTAGGCATTTCAAATGAACTCAAC 58.087 36.000 14.65 0.00 33.13 3.18
2219 11105 5.534207 AGGCATTTCAAATGAACTCAACA 57.466 34.783 14.65 0.00 33.13 3.33
2220 11106 6.105397 AGGCATTTCAAATGAACTCAACAT 57.895 33.333 14.65 0.00 33.13 2.71
2221 11107 7.230849 AGGCATTTCAAATGAACTCAACATA 57.769 32.000 14.65 0.00 33.13 2.29
2222 11108 7.092716 AGGCATTTCAAATGAACTCAACATAC 58.907 34.615 14.65 0.00 33.13 2.39
2223 11109 6.033831 GGCATTTCAAATGAACTCAACATACG 59.966 38.462 14.65 0.00 33.13 3.06
2224 11110 6.033831 GCATTTCAAATGAACTCAACATACGG 59.966 38.462 14.65 0.00 33.13 4.02
2225 11111 6.869315 TTTCAAATGAACTCAACATACGGA 57.131 33.333 0.00 0.00 33.13 4.69
2226 11112 7.447374 TTTCAAATGAACTCAACATACGGAT 57.553 32.000 0.00 0.00 33.13 4.18
2227 11113 6.421377 TCAAATGAACTCAACATACGGATG 57.579 37.500 5.94 5.94 39.16 3.51
2228 11114 7.040755 TTTCAAATGAACTCAACATACGGATGT 60.041 33.333 7.68 7.68 39.82 3.06
2229 11115 7.100409 TCAAATGAACTCAACATACGGATGTA 58.900 34.615 15.10 0.00 45.93 2.29
2230 11116 7.768582 TCAAATGAACTCAACATACGGATGTAT 59.231 33.333 15.10 0.00 45.93 2.29
2267 11153 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
2268 11154 5.536554 AGTGTAGATTCACTCATTTTGCG 57.463 39.130 0.00 0.00 44.07 4.85
2269 11155 4.091424 GTGTAGATTCACTCATTTTGCGC 58.909 43.478 0.00 0.00 35.68 6.09
2270 11156 2.927553 AGATTCACTCATTTTGCGCC 57.072 45.000 4.18 0.00 0.00 6.53
2271 11157 1.131126 AGATTCACTCATTTTGCGCCG 59.869 47.619 4.18 0.00 0.00 6.46
2272 11158 0.881118 ATTCACTCATTTTGCGCCGT 59.119 45.000 4.18 0.00 0.00 5.68
2273 11159 1.514003 TTCACTCATTTTGCGCCGTA 58.486 45.000 4.18 0.00 0.00 4.02
2274 11160 1.732941 TCACTCATTTTGCGCCGTAT 58.267 45.000 4.18 0.00 0.00 3.06
2275 11161 1.396648 TCACTCATTTTGCGCCGTATG 59.603 47.619 4.18 5.63 0.00 2.39
2276 11162 1.130373 CACTCATTTTGCGCCGTATGT 59.870 47.619 4.18 0.00 0.00 2.29
2277 11163 2.350192 CACTCATTTTGCGCCGTATGTA 59.650 45.455 4.18 0.00 0.00 2.29
2278 11164 2.607635 ACTCATTTTGCGCCGTATGTAG 59.392 45.455 4.18 7.56 0.00 2.74
2279 11165 2.607635 CTCATTTTGCGCCGTATGTAGT 59.392 45.455 4.18 0.00 0.00 2.73
2280 11166 2.605818 TCATTTTGCGCCGTATGTAGTC 59.394 45.455 4.18 0.00 0.00 2.59
2281 11167 2.081725 TTTTGCGCCGTATGTAGTCA 57.918 45.000 4.18 0.00 0.00 3.41
2282 11168 2.303163 TTTGCGCCGTATGTAGTCAT 57.697 45.000 4.18 0.00 38.00 3.06
2283 11169 2.303163 TTGCGCCGTATGTAGTCATT 57.697 45.000 4.18 0.00 35.70 2.57
2284 11170 2.303163 TGCGCCGTATGTAGTCATTT 57.697 45.000 4.18 0.00 35.70 2.32
2285 11171 1.930503 TGCGCCGTATGTAGTCATTTG 59.069 47.619 4.18 0.00 35.70 2.32
2286 11172 1.931172 GCGCCGTATGTAGTCATTTGT 59.069 47.619 0.00 0.00 35.70 2.83
2287 11173 2.350498 GCGCCGTATGTAGTCATTTGTT 59.650 45.455 0.00 0.00 35.70 2.83
2288 11174 3.784199 GCGCCGTATGTAGTCATTTGTTG 60.784 47.826 0.00 0.00 35.70 3.33
2289 11175 3.615056 CGCCGTATGTAGTCATTTGTTGA 59.385 43.478 0.00 0.00 35.70 3.18
2290 11176 4.092237 CGCCGTATGTAGTCATTTGTTGAA 59.908 41.667 0.00 0.00 35.70 2.69
2291 11177 5.390040 CGCCGTATGTAGTCATTTGTTGAAA 60.390 40.000 0.00 0.00 35.70 2.69
2292 11178 6.551736 GCCGTATGTAGTCATTTGTTGAAAT 58.448 36.000 0.00 0.00 35.70 2.17
2293 11179 6.687105 GCCGTATGTAGTCATTTGTTGAAATC 59.313 38.462 0.00 0.00 35.70 2.17
2294 11180 7.414098 GCCGTATGTAGTCATTTGTTGAAATCT 60.414 37.037 0.00 0.00 35.70 2.40
2295 11181 8.116753 CCGTATGTAGTCATTTGTTGAAATCTC 58.883 37.037 0.00 0.00 35.70 2.75
2296 11182 8.873830 CGTATGTAGTCATTTGTTGAAATCTCT 58.126 33.333 0.00 0.00 35.70 3.10
2300 11186 9.996554 TGTAGTCATTTGTTGAAATCTCTAGAA 57.003 29.630 0.00 0.00 35.70 2.10
2303 11189 9.784531 AGTCATTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 35.70 2.52
2304 11190 9.818796 GTCATTTGTTGAAATCTCTAGAAAGAC 57.181 33.333 0.00 0.00 35.70 3.01
2305 11191 9.559732 TCATTTGTTGAAATCTCTAGAAAGACA 57.440 29.630 0.00 0.00 28.65 3.41
2308 11194 8.964476 TTGTTGAAATCTCTAGAAAGACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2319 11205 9.291664 CTCTAGAAAGACAAGTATTTAGGAACG 57.708 37.037 0.00 0.00 0.00 3.95
2320 11206 8.248945 TCTAGAAAGACAAGTATTTAGGAACGG 58.751 37.037 0.00 0.00 0.00 4.44
2321 11207 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
2322 11208 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
2323 11209 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
2324 11210 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
2325 11211 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
2326 11212 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
2327 11213 2.699321 AGTATTTAGGAACGGAGGGAGC 59.301 50.000 0.00 0.00 0.00 4.70
2349 11235 6.802608 AGCAATGTTCATGATCCTAAACATG 58.197 36.000 13.98 0.00 40.46 3.21
2420 11325 3.884895 TGGTCTTGGATTGCATTACGAT 58.115 40.909 0.00 0.00 0.00 3.73
2421 11326 5.029807 TGGTCTTGGATTGCATTACGATA 57.970 39.130 0.00 0.00 0.00 2.92
2422 11327 4.814234 TGGTCTTGGATTGCATTACGATAC 59.186 41.667 0.00 0.00 0.00 2.24
2423 11328 5.057149 GGTCTTGGATTGCATTACGATACT 58.943 41.667 0.00 0.00 0.00 2.12
2424 11329 6.183360 TGGTCTTGGATTGCATTACGATACTA 60.183 38.462 0.00 0.00 0.00 1.82
2425 11330 6.145696 GGTCTTGGATTGCATTACGATACTAC 59.854 42.308 0.00 0.00 0.00 2.73
2426 11331 5.918576 TCTTGGATTGCATTACGATACTACG 59.081 40.000 0.00 0.00 39.31 3.51
2461 11366 9.201989 TGATTACTAGGAGTAGTTCATTCACAT 57.798 33.333 0.00 0.00 40.23 3.21
2485 11390 4.301628 GCTAAATGTGCCAATTGCTATCC 58.698 43.478 0.00 0.00 42.00 2.59
2608 11588 6.149973 CCAAGTAGCTTCAACTTCATCATTCA 59.850 38.462 0.00 0.00 34.99 2.57
2610 11590 7.934855 AGTAGCTTCAACTTCATCATTCATT 57.065 32.000 0.00 0.00 0.00 2.57
2611 11591 7.983307 AGTAGCTTCAACTTCATCATTCATTC 58.017 34.615 0.00 0.00 0.00 2.67
2612 11592 6.829229 AGCTTCAACTTCATCATTCATTCA 57.171 33.333 0.00 0.00 0.00 2.57
2613 11593 7.406031 AGCTTCAACTTCATCATTCATTCAT 57.594 32.000 0.00 0.00 0.00 2.57
2614 11594 7.837863 AGCTTCAACTTCATCATTCATTCATT 58.162 30.769 0.00 0.00 0.00 2.57
2615 11595 7.974501 AGCTTCAACTTCATCATTCATTCATTC 59.025 33.333 0.00 0.00 0.00 2.67
2639 11619 7.270047 TCTTACATCAGTTATACGAAAAGGGG 58.730 38.462 0.00 0.00 0.00 4.79
2650 11630 1.339631 CGAAAAGGGGTGGAGTGCATA 60.340 52.381 0.00 0.00 0.00 3.14
2652 11632 3.365472 GAAAAGGGGTGGAGTGCATAAT 58.635 45.455 0.00 0.00 0.00 1.28
2721 11714 9.678941 GATTTTCGTTTTTCTCTATTTTCTGGT 57.321 29.630 0.00 0.00 0.00 4.00
2723 11716 8.850454 TTTCGTTTTTCTCTATTTTCTGGTTG 57.150 30.769 0.00 0.00 0.00 3.77
2757 11752 3.237268 TGTTCATGGCCCTACTGTTTT 57.763 42.857 0.00 0.00 0.00 2.43
2798 11793 6.292389 ACTTTCACGAATAATATGCTCTGC 57.708 37.500 0.00 0.00 0.00 4.26
2800 11795 3.317150 TCACGAATAATATGCTCTGCCG 58.683 45.455 0.00 0.00 0.00 5.69
2877 11876 2.438800 ATAGCCTCACTCGTGGTAGT 57.561 50.000 0.00 0.00 0.00 2.73
2918 11918 9.979578 TTTCATGCACTCAACTTACAAAATTAT 57.020 25.926 0.00 0.00 0.00 1.28
3016 12016 1.903877 AACGAGTCATGAGGGGGCAG 61.904 60.000 0.00 0.00 0.00 4.85
3025 12025 0.032416 TGAGGGGGCAGGTAGTACTC 60.032 60.000 0.00 0.00 0.00 2.59
3026 12026 0.759812 GAGGGGGCAGGTAGTACTCC 60.760 65.000 0.00 0.48 0.00 3.85
3027 12027 1.765255 GGGGGCAGGTAGTACTCCC 60.765 68.421 0.00 2.91 36.25 4.30
3028 12028 1.313822 GGGGCAGGTAGTACTCCCT 59.686 63.158 14.53 8.77 37.16 4.20
3029 12029 0.759812 GGGGCAGGTAGTACTCCCTC 60.760 65.000 14.53 6.11 37.16 4.30
3030 12030 0.759812 GGGCAGGTAGTACTCCCTCC 60.760 65.000 3.56 8.89 34.19 4.30
3031 12031 1.108132 GGCAGGTAGTACTCCCTCCG 61.108 65.000 3.56 0.00 0.00 4.63
3032 12032 1.108132 GCAGGTAGTACTCCCTCCGG 61.108 65.000 3.56 0.00 0.00 5.14
3033 12033 0.258194 CAGGTAGTACTCCCTCCGGT 59.742 60.000 3.56 0.00 0.00 5.28
3034 12034 0.550432 AGGTAGTACTCCCTCCGGTC 59.450 60.000 0.11 0.00 0.00 4.79
3035 12035 0.467106 GGTAGTACTCCCTCCGGTCC 60.467 65.000 0.00 0.00 0.00 4.46
3036 12036 0.550432 GTAGTACTCCCTCCGGTCCT 59.450 60.000 0.00 0.00 0.00 3.85
3037 12037 1.064091 GTAGTACTCCCTCCGGTCCTT 60.064 57.143 0.00 0.00 0.00 3.36
3038 12038 0.412640 AGTACTCCCTCCGGTCCTTT 59.587 55.000 0.00 0.00 0.00 3.11
3039 12039 1.203275 AGTACTCCCTCCGGTCCTTTT 60.203 52.381 0.00 0.00 0.00 2.27
3040 12040 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
3041 12041 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
3042 12042 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
3043 12043 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
3044 12044 2.305052 CTCCCTCCGGTCCTTTTTACTT 59.695 50.000 0.00 0.00 0.00 2.24
3045 12045 2.712627 TCCCTCCGGTCCTTTTTACTTT 59.287 45.455 0.00 0.00 0.00 2.66
3046 12046 2.817844 CCCTCCGGTCCTTTTTACTTTG 59.182 50.000 0.00 0.00 0.00 2.77
3047 12047 2.228103 CCTCCGGTCCTTTTTACTTTGC 59.772 50.000 0.00 0.00 0.00 3.68
3048 12048 2.882137 CTCCGGTCCTTTTTACTTTGCA 59.118 45.455 0.00 0.00 0.00 4.08
3049 12049 2.619646 TCCGGTCCTTTTTACTTTGCAC 59.380 45.455 0.00 0.00 0.00 4.57
3050 12050 2.359531 CCGGTCCTTTTTACTTTGCACA 59.640 45.455 0.00 0.00 0.00 4.57
3051 12051 3.005367 CCGGTCCTTTTTACTTTGCACAT 59.995 43.478 0.00 0.00 0.00 3.21
3052 12052 4.500716 CCGGTCCTTTTTACTTTGCACATT 60.501 41.667 0.00 0.00 0.00 2.71
3053 12053 4.444056 CGGTCCTTTTTACTTTGCACATTG 59.556 41.667 0.00 0.00 0.00 2.82
3054 12054 4.749598 GGTCCTTTTTACTTTGCACATTGG 59.250 41.667 0.00 0.00 0.00 3.16
3055 12055 5.452636 GGTCCTTTTTACTTTGCACATTGGA 60.453 40.000 0.00 0.00 0.00 3.53
3056 12056 6.223120 GTCCTTTTTACTTTGCACATTGGAT 58.777 36.000 0.00 0.00 0.00 3.41
3057 12057 6.705825 GTCCTTTTTACTTTGCACATTGGATT 59.294 34.615 0.00 0.00 0.00 3.01
3058 12058 7.226523 GTCCTTTTTACTTTGCACATTGGATTT 59.773 33.333 0.00 0.00 0.00 2.17
3059 12059 7.226325 TCCTTTTTACTTTGCACATTGGATTTG 59.774 33.333 0.00 0.00 0.00 2.32
3060 12060 5.921004 TTTACTTTGCACATTGGATTTGC 57.079 34.783 0.00 0.00 36.76 3.68
3061 12061 2.769893 ACTTTGCACATTGGATTTGCC 58.230 42.857 0.00 0.00 35.26 4.52
3062 12062 1.727880 CTTTGCACATTGGATTTGCCG 59.272 47.619 0.00 0.00 40.66 5.69
3063 12063 0.964700 TTGCACATTGGATTTGCCGA 59.035 45.000 0.00 0.00 40.66 5.54
3064 12064 0.964700 TGCACATTGGATTTGCCGAA 59.035 45.000 0.00 0.00 40.66 4.30
3065 12065 1.342496 TGCACATTGGATTTGCCGAAA 59.658 42.857 0.00 0.00 40.66 3.46
3066 12066 1.994779 GCACATTGGATTTGCCGAAAG 59.005 47.619 0.00 0.00 40.66 2.62
3067 12067 2.610232 GCACATTGGATTTGCCGAAAGT 60.610 45.455 0.00 0.00 40.66 2.66
3068 12068 3.244976 CACATTGGATTTGCCGAAAGTC 58.755 45.455 0.00 0.00 40.66 3.01
3069 12069 2.890311 ACATTGGATTTGCCGAAAGTCA 59.110 40.909 0.00 0.00 40.66 3.41
3070 12070 3.320541 ACATTGGATTTGCCGAAAGTCAA 59.679 39.130 0.00 0.00 40.66 3.18
3071 12071 4.202202 ACATTGGATTTGCCGAAAGTCAAA 60.202 37.500 0.00 0.00 40.66 2.69
3072 12072 3.363341 TGGATTTGCCGAAAGTCAAAC 57.637 42.857 0.00 0.00 40.66 2.93
3073 12073 2.955660 TGGATTTGCCGAAAGTCAAACT 59.044 40.909 0.00 0.00 40.66 2.66
3074 12074 3.383185 TGGATTTGCCGAAAGTCAAACTT 59.617 39.130 0.00 0.00 38.90 2.66
3075 12075 4.142049 TGGATTTGCCGAAAGTCAAACTTT 60.142 37.500 4.82 4.82 41.99 2.66
3076 12076 6.190408 TGGATTTGCCGAAAGTCAAACTTTG 61.190 40.000 9.65 0.00 42.50 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 9.247861 CCCTAGAGGCAATAATAAAAGCATTAT 57.752 33.333 0.00 0.00 33.46 1.28
50 51 8.635765 CCCTAGAGGCAATAATAAAAGCATTA 57.364 34.615 0.00 0.00 0.00 1.90
51 52 7.530426 CCCTAGAGGCAATAATAAAAGCATT 57.470 36.000 0.00 0.00 0.00 3.56
67 68 4.437682 TGTTGGAAATATGCCCTAGAGG 57.562 45.455 0.00 0.00 39.47 3.69
68 69 6.966534 AATTGTTGGAAATATGCCCTAGAG 57.033 37.500 0.00 0.00 0.00 2.43
69 70 8.830915 TTTAATTGTTGGAAATATGCCCTAGA 57.169 30.769 0.00 0.00 0.00 2.43
70 71 9.696917 GATTTAATTGTTGGAAATATGCCCTAG 57.303 33.333 0.00 0.00 0.00 3.02
71 72 9.206690 TGATTTAATTGTTGGAAATATGCCCTA 57.793 29.630 0.00 0.00 0.00 3.53
72 73 8.088463 TGATTTAATTGTTGGAAATATGCCCT 57.912 30.769 0.00 0.00 0.00 5.19
73 74 8.907222 ATGATTTAATTGTTGGAAATATGCCC 57.093 30.769 0.00 0.00 0.00 5.36
115 116 4.789012 ACGTTCTTATTGACGGAGGTTA 57.211 40.909 0.90 0.00 0.00 2.85
123 124 6.089820 TGGTATCGTCAAACGTTCTTATTGAC 59.910 38.462 16.51 16.51 45.87 3.18
124 125 6.157904 TGGTATCGTCAAACGTTCTTATTGA 58.842 36.000 0.00 0.00 43.14 2.57
128 129 5.531634 AGTTGGTATCGTCAAACGTTCTTA 58.468 37.500 0.00 0.00 43.14 2.10
142 143 8.506168 TTCCTCATGTTTGAATAGTTGGTATC 57.494 34.615 0.00 0.00 0.00 2.24
144 145 8.698973 TTTTCCTCATGTTTGAATAGTTGGTA 57.301 30.769 0.00 0.00 0.00 3.25
145 146 7.595819 TTTTCCTCATGTTTGAATAGTTGGT 57.404 32.000 0.00 0.00 0.00 3.67
162 163 4.886579 AGATTGCAAACACCATTTTCCTC 58.113 39.130 1.71 0.00 0.00 3.71
163 164 4.590222 AGAGATTGCAAACACCATTTTCCT 59.410 37.500 1.71 0.00 0.00 3.36
171 172 5.886960 ACTTGATAGAGATTGCAAACACC 57.113 39.130 1.71 0.00 0.00 4.16
179 180 8.472007 AGTAAGGGAGTACTTGATAGAGATTG 57.528 38.462 0.00 0.00 29.76 2.67
190 191 7.317722 ACTTTCAATGAGTAAGGGAGTACTT 57.682 36.000 0.00 0.00 34.40 2.24
191 192 6.936968 ACTTTCAATGAGTAAGGGAGTACT 57.063 37.500 0.00 0.00 37.02 2.73
192 193 7.981102 AAACTTTCAATGAGTAAGGGAGTAC 57.019 36.000 0.50 0.00 0.00 2.73
282 376 6.976636 TGACTTGTTCAAATGCATACGATA 57.023 33.333 0.00 0.00 0.00 2.92
283 377 5.878332 TGACTTGTTCAAATGCATACGAT 57.122 34.783 0.00 0.00 0.00 3.73
296 390 2.622942 TGGTCAGGCATTTGACTTGTTC 59.377 45.455 12.90 0.54 45.32 3.18
300 394 2.233271 CACTGGTCAGGCATTTGACTT 58.767 47.619 12.90 0.00 45.32 3.01
326 431 1.207089 GGTGGTCGTTGGAGATGATGA 59.793 52.381 0.00 0.00 0.00 2.92
341 446 1.151452 ATGGGTAGTTGGGGGTGGT 60.151 57.895 0.00 0.00 0.00 4.16
343 448 0.701731 TTGATGGGTAGTTGGGGGTG 59.298 55.000 0.00 0.00 0.00 4.61
386 492 3.447229 CCCCGCAAAAAGAAAGGACATAT 59.553 43.478 0.00 0.00 0.00 1.78
411 517 2.942804 TGATCAAGGGCACAGAAACAA 58.057 42.857 0.00 0.00 0.00 2.83
416 522 4.711399 CAAGATATGATCAAGGGCACAGA 58.289 43.478 0.00 0.00 0.00 3.41
419 525 3.484407 AGCAAGATATGATCAAGGGCAC 58.516 45.455 0.00 0.00 0.00 5.01
422 528 7.095910 CAGTACTAGCAAGATATGATCAAGGG 58.904 42.308 0.00 0.00 0.00 3.95
432 538 4.483950 AGATGGCCAGTACTAGCAAGATA 58.516 43.478 13.05 0.00 0.00 1.98
458 564 9.764363 GAACTTCCAATTTTCTCCAACTAAAAT 57.236 29.630 0.00 0.00 36.98 1.82
470 576 7.707774 TCAATTTTCCGAACTTCCAATTTTC 57.292 32.000 0.00 0.00 0.00 2.29
480 586 5.766150 TCACACAATCAATTTTCCGAACT 57.234 34.783 0.00 0.00 0.00 3.01
484 590 9.787532 ATAGTTAATCACACAATCAATTTTCCG 57.212 29.630 0.00 0.00 0.00 4.30
509 615 4.342092 CAGAAACACAACCTTGAAGGGAAT 59.658 41.667 16.78 0.00 40.58 3.01
539 645 6.867293 AGCTCTTTCTTTCGTCGTACTAAATT 59.133 34.615 0.00 0.00 0.00 1.82
548 654 4.387083 GCTTTAAGCTCTTTCTTTCGTCG 58.613 43.478 10.01 0.00 38.45 5.12
552 658 5.179555 TCTTCGGCTTTAAGCTCTTTCTTTC 59.820 40.000 16.89 0.00 41.99 2.62
553 659 5.063880 TCTTCGGCTTTAAGCTCTTTCTTT 58.936 37.500 16.89 0.00 41.99 2.52
556 662 6.293135 CCATATCTTCGGCTTTAAGCTCTTTC 60.293 42.308 16.89 0.00 41.99 2.62
561 667 4.423625 ACCATATCTTCGGCTTTAAGCT 57.576 40.909 16.89 0.00 41.99 3.74
604 710 4.315803 ACACGGATTTCTCACTAAAGGTG 58.684 43.478 0.00 0.00 46.60 4.00
605 711 4.562963 GGACACGGATTTCTCACTAAAGGT 60.563 45.833 0.00 0.00 0.00 3.50
606 712 3.933332 GGACACGGATTTCTCACTAAAGG 59.067 47.826 0.00 0.00 0.00 3.11
607 713 3.612860 CGGACACGGATTTCTCACTAAAG 59.387 47.826 0.00 0.00 36.18 1.85
608 714 3.581755 CGGACACGGATTTCTCACTAAA 58.418 45.455 0.00 0.00 36.18 1.85
609 715 2.673043 GCGGACACGGATTTCTCACTAA 60.673 50.000 0.00 0.00 41.36 2.24
610 716 1.135199 GCGGACACGGATTTCTCACTA 60.135 52.381 0.00 0.00 41.36 2.74
611 717 0.389948 GCGGACACGGATTTCTCACT 60.390 55.000 0.00 0.00 41.36 3.41
612 718 1.359459 GGCGGACACGGATTTCTCAC 61.359 60.000 0.00 0.00 41.36 3.51
613 719 1.079405 GGCGGACACGGATTTCTCA 60.079 57.895 0.00 0.00 41.36 3.27
614 720 1.814169 GGGCGGACACGGATTTCTC 60.814 63.158 0.00 0.00 41.36 2.87
615 721 2.267961 GGGCGGACACGGATTTCT 59.732 61.111 0.00 0.00 41.36 2.52
616 722 2.822701 GGGGCGGACACGGATTTC 60.823 66.667 0.00 0.00 41.36 2.17
617 723 3.622060 CTGGGGCGGACACGGATTT 62.622 63.158 0.00 0.00 41.36 2.17
618 724 4.096003 CTGGGGCGGACACGGATT 62.096 66.667 0.00 0.00 41.36 3.01
623 729 3.842925 TTCTTGCTGGGGCGGACAC 62.843 63.158 0.00 0.00 42.25 3.67
624 730 2.632602 TTTTCTTGCTGGGGCGGACA 62.633 55.000 0.00 0.00 42.25 4.02
625 731 1.901464 TTTTCTTGCTGGGGCGGAC 60.901 57.895 0.00 0.00 42.25 4.79
626 732 1.901464 GTTTTCTTGCTGGGGCGGA 60.901 57.895 0.00 0.00 42.25 5.54
627 733 1.535204 ATGTTTTCTTGCTGGGGCGG 61.535 55.000 0.00 0.00 42.25 6.13
628 734 1.173043 TATGTTTTCTTGCTGGGGCG 58.827 50.000 0.00 0.00 42.25 6.13
629 735 2.497273 ACATATGTTTTCTTGCTGGGGC 59.503 45.455 1.41 0.00 39.26 5.80
630 736 3.676873 GCACATATGTTTTCTTGCTGGGG 60.677 47.826 5.37 0.00 0.00 4.96
631 737 3.514645 GCACATATGTTTTCTTGCTGGG 58.485 45.455 5.37 0.00 0.00 4.45
632 738 3.173599 CGCACATATGTTTTCTTGCTGG 58.826 45.455 5.37 0.00 0.00 4.85
633 739 3.605056 CACGCACATATGTTTTCTTGCTG 59.395 43.478 5.37 5.11 0.00 4.41
634 740 3.253188 ACACGCACATATGTTTTCTTGCT 59.747 39.130 5.37 0.00 0.00 3.91
635 741 3.564511 ACACGCACATATGTTTTCTTGC 58.435 40.909 5.37 4.64 0.00 4.01
636 742 5.684850 TGTACACGCACATATGTTTTCTTG 58.315 37.500 5.37 5.23 0.00 3.02
637 743 5.699001 TCTGTACACGCACATATGTTTTCTT 59.301 36.000 5.37 0.00 0.00 2.52
638 744 5.234752 TCTGTACACGCACATATGTTTTCT 58.765 37.500 5.37 0.00 0.00 2.52
639 745 5.524511 TCTGTACACGCACATATGTTTTC 57.475 39.130 5.37 0.00 0.00 2.29
640 746 5.616866 GCTTCTGTACACGCACATATGTTTT 60.617 40.000 5.37 0.00 0.00 2.43
641 747 4.142902 GCTTCTGTACACGCACATATGTTT 60.143 41.667 5.37 0.00 0.00 2.83
642 748 3.370978 GCTTCTGTACACGCACATATGTT 59.629 43.478 5.37 0.00 0.00 2.71
643 749 2.930040 GCTTCTGTACACGCACATATGT 59.070 45.455 1.41 1.41 0.00 2.29
644 750 2.929398 TGCTTCTGTACACGCACATATG 59.071 45.455 0.00 0.00 0.00 1.78
645 751 3.245518 TGCTTCTGTACACGCACATAT 57.754 42.857 5.82 0.00 0.00 1.78
646 752 2.734276 TGCTTCTGTACACGCACATA 57.266 45.000 5.82 0.00 0.00 2.29
647 753 3.605013 TGCTTCTGTACACGCACAT 57.395 47.368 5.82 0.00 0.00 3.21
650 756 0.934496 GTTGTGCTTCTGTACACGCA 59.066 50.000 5.82 5.82 38.47 5.24
651 757 0.934496 TGTTGTGCTTCTGTACACGC 59.066 50.000 0.00 0.00 38.47 5.34
652 758 2.607635 AGTTGTTGTGCTTCTGTACACG 59.392 45.455 0.00 0.00 38.47 4.49
653 759 4.616181 AAGTTGTTGTGCTTCTGTACAC 57.384 40.909 0.00 0.00 38.47 2.90
654 760 4.697828 TGAAAGTTGTTGTGCTTCTGTACA 59.302 37.500 0.00 0.00 37.03 2.90
655 761 5.028375 GTGAAAGTTGTTGTGCTTCTGTAC 58.972 41.667 0.00 0.00 0.00 2.90
656 762 4.201773 CGTGAAAGTTGTTGTGCTTCTGTA 60.202 41.667 0.00 0.00 0.00 2.74
657 763 3.426159 CGTGAAAGTTGTTGTGCTTCTGT 60.426 43.478 0.00 0.00 0.00 3.41
658 764 3.100817 CGTGAAAGTTGTTGTGCTTCTG 58.899 45.455 0.00 0.00 0.00 3.02
659 765 2.477863 GCGTGAAAGTTGTTGTGCTTCT 60.478 45.455 0.00 0.00 0.00 2.85
660 766 1.846175 GCGTGAAAGTTGTTGTGCTTC 59.154 47.619 0.00 0.00 0.00 3.86
661 767 1.472480 AGCGTGAAAGTTGTTGTGCTT 59.528 42.857 0.00 0.00 0.00 3.91
662 768 1.064060 GAGCGTGAAAGTTGTTGTGCT 59.936 47.619 0.00 0.00 0.00 4.40
663 769 1.202132 TGAGCGTGAAAGTTGTTGTGC 60.202 47.619 0.00 0.00 0.00 4.57
664 770 2.823196 TGAGCGTGAAAGTTGTTGTG 57.177 45.000 0.00 0.00 0.00 3.33
665 771 3.243068 GGAATGAGCGTGAAAGTTGTTGT 60.243 43.478 0.00 0.00 0.00 3.32
666 772 3.003689 AGGAATGAGCGTGAAAGTTGTTG 59.996 43.478 0.00 0.00 0.00 3.33
667 773 3.214328 AGGAATGAGCGTGAAAGTTGTT 58.786 40.909 0.00 0.00 0.00 2.83
668 774 2.851195 AGGAATGAGCGTGAAAGTTGT 58.149 42.857 0.00 0.00 0.00 3.32
669 775 3.904136 AAGGAATGAGCGTGAAAGTTG 57.096 42.857 0.00 0.00 0.00 3.16
670 776 4.642429 AGTAAGGAATGAGCGTGAAAGTT 58.358 39.130 0.00 0.00 0.00 2.66
671 777 4.246458 GAGTAAGGAATGAGCGTGAAAGT 58.754 43.478 0.00 0.00 0.00 2.66
672 778 3.619038 GGAGTAAGGAATGAGCGTGAAAG 59.381 47.826 0.00 0.00 0.00 2.62
673 779 3.007506 TGGAGTAAGGAATGAGCGTGAAA 59.992 43.478 0.00 0.00 0.00 2.69
674 780 2.565391 TGGAGTAAGGAATGAGCGTGAA 59.435 45.455 0.00 0.00 0.00 3.18
675 781 2.176045 TGGAGTAAGGAATGAGCGTGA 58.824 47.619 0.00 0.00 0.00 4.35
676 782 2.672961 TGGAGTAAGGAATGAGCGTG 57.327 50.000 0.00 0.00 0.00 5.34
677 783 3.695830 TTTGGAGTAAGGAATGAGCGT 57.304 42.857 0.00 0.00 0.00 5.07
678 784 4.003648 AGTTTTGGAGTAAGGAATGAGCG 58.996 43.478 0.00 0.00 0.00 5.03
679 785 7.442666 CCTATAGTTTTGGAGTAAGGAATGAGC 59.557 40.741 0.00 0.00 0.00 4.26
680 786 8.487028 ACCTATAGTTTTGGAGTAAGGAATGAG 58.513 37.037 0.00 0.00 0.00 2.90
681 787 8.388656 ACCTATAGTTTTGGAGTAAGGAATGA 57.611 34.615 0.00 0.00 0.00 2.57
682 788 9.462606 AAACCTATAGTTTTGGAGTAAGGAATG 57.537 33.333 0.00 0.00 46.79 2.67
697 803 4.035814 ACGGAGGGCTAAAACCTATAGTT 58.964 43.478 0.00 0.00 41.81 2.24
698 804 3.650948 ACGGAGGGCTAAAACCTATAGT 58.349 45.455 0.00 0.00 38.79 2.12
699 805 4.629092 GAACGGAGGGCTAAAACCTATAG 58.371 47.826 0.00 0.00 38.79 1.31
700 806 3.068590 CGAACGGAGGGCTAAAACCTATA 59.931 47.826 0.00 0.00 38.79 1.31
701 807 2.159000 CGAACGGAGGGCTAAAACCTAT 60.159 50.000 0.00 0.00 38.79 2.57
702 808 1.205417 CGAACGGAGGGCTAAAACCTA 59.795 52.381 0.00 0.00 38.79 3.08
703 809 0.036671 CGAACGGAGGGCTAAAACCT 60.037 55.000 0.00 0.00 42.18 3.50
704 810 1.642037 GCGAACGGAGGGCTAAAACC 61.642 60.000 0.00 0.00 0.00 3.27
705 811 0.672711 AGCGAACGGAGGGCTAAAAC 60.673 55.000 0.00 0.00 34.75 2.43
706 812 0.672401 CAGCGAACGGAGGGCTAAAA 60.672 55.000 0.00 0.00 34.75 1.52
707 813 1.079405 CAGCGAACGGAGGGCTAAA 60.079 57.895 0.00 0.00 34.75 1.85
708 814 2.577059 CAGCGAACGGAGGGCTAA 59.423 61.111 0.00 0.00 34.75 3.09
709 815 3.458163 CCAGCGAACGGAGGGCTA 61.458 66.667 0.00 0.00 34.75 3.93
712 818 4.796231 CGACCAGCGAACGGAGGG 62.796 72.222 0.00 0.00 44.57 4.30
723 829 1.135083 AGTATCGTCTTTGGCGACCAG 60.135 52.381 0.00 0.00 41.33 4.00
724 830 0.892755 AGTATCGTCTTTGGCGACCA 59.107 50.000 0.00 0.00 41.33 4.02
725 831 1.135199 TGAGTATCGTCTTTGGCGACC 60.135 52.381 0.00 0.00 41.33 4.79
726 832 2.273370 TGAGTATCGTCTTTGGCGAC 57.727 50.000 0.00 0.00 41.33 5.19
727 833 2.602878 GTTGAGTATCGTCTTTGGCGA 58.397 47.619 0.00 0.00 42.75 5.54
728 834 1.659098 GGTTGAGTATCGTCTTTGGCG 59.341 52.381 0.00 0.00 38.61 5.69
729 835 2.695359 TGGTTGAGTATCGTCTTTGGC 58.305 47.619 0.00 0.00 38.61 4.52
730 836 4.568359 CAGATGGTTGAGTATCGTCTTTGG 59.432 45.833 0.00 0.00 38.61 3.28
731 837 5.289675 GTCAGATGGTTGAGTATCGTCTTTG 59.710 44.000 0.00 0.00 38.61 2.77
732 838 5.411781 GTCAGATGGTTGAGTATCGTCTTT 58.588 41.667 0.00 0.00 38.61 2.52
733 839 4.142138 GGTCAGATGGTTGAGTATCGTCTT 60.142 45.833 0.00 0.00 38.61 3.01
734 840 3.381908 GGTCAGATGGTTGAGTATCGTCT 59.618 47.826 0.00 0.00 38.61 4.18
735 841 3.491104 GGGTCAGATGGTTGAGTATCGTC 60.491 52.174 0.00 0.00 38.61 4.20
736 842 2.431057 GGGTCAGATGGTTGAGTATCGT 59.569 50.000 0.00 0.00 38.61 3.73
737 843 2.695666 AGGGTCAGATGGTTGAGTATCG 59.304 50.000 0.00 0.00 38.61 2.92
738 844 5.871396 TTAGGGTCAGATGGTTGAGTATC 57.129 43.478 0.00 0.00 0.00 2.24
739 845 5.905331 TGATTAGGGTCAGATGGTTGAGTAT 59.095 40.000 0.00 0.00 0.00 2.12
740 846 5.277250 TGATTAGGGTCAGATGGTTGAGTA 58.723 41.667 0.00 0.00 0.00 2.59
741 847 4.104086 TGATTAGGGTCAGATGGTTGAGT 58.896 43.478 0.00 0.00 0.00 3.41
742 848 4.760530 TGATTAGGGTCAGATGGTTGAG 57.239 45.455 0.00 0.00 0.00 3.02
752 858 5.070446 AGCTTCGATTACATGATTAGGGTCA 59.930 40.000 0.00 0.00 0.00 4.02
773 3852 2.024305 CGGTTACGATCGCGAGCT 59.976 61.111 23.21 11.85 44.60 4.09
781 3860 4.217159 GAGCGGGGCGGTTACGAT 62.217 66.667 0.00 0.00 44.60 3.73
795 3874 5.061808 AGTTTCACGTGTAATATGAACGAGC 59.938 40.000 16.51 0.00 39.64 5.03
809 3996 4.718858 TTATTTCGGACAGTTTCACGTG 57.281 40.909 9.94 9.94 0.00 4.49
859 4046 3.706594 TGTCTCTAACAGCCCTAGATTGG 59.293 47.826 0.00 0.00 32.81 3.16
867 4054 4.333926 GTGATGAAATGTCTCTAACAGCCC 59.666 45.833 0.00 0.00 42.37 5.19
941 4128 7.599621 CACAAAATCAACTGCTCATAAAATCCA 59.400 33.333 0.00 0.00 0.00 3.41
963 4151 4.021544 GTGATTTTGGTAATCTGCCCACAA 60.022 41.667 0.00 0.00 0.00 3.33
965 4153 3.509575 TGTGATTTTGGTAATCTGCCCAC 59.490 43.478 0.00 0.00 0.00 4.61
966 4154 3.772387 TGTGATTTTGGTAATCTGCCCA 58.228 40.909 0.00 0.00 0.00 5.36
980 4168 6.097839 CCCCATGATTCTTCAGAATGTGATTT 59.902 38.462 6.79 0.00 44.14 2.17
1014 4641 1.688811 GAGGGTGTGTATGGGCCAA 59.311 57.895 11.89 0.00 0.00 4.52
1195 4825 4.162690 GACAGGTAGGCCCAGCGG 62.163 72.222 0.00 0.00 34.66 5.52
1515 5145 0.732880 CGTCGGAGTAGGTGTGCTTG 60.733 60.000 0.00 0.00 0.00 4.01
1738 5368 2.597713 CGAAGTTGAGCAGCACGCA 61.598 57.895 0.00 0.00 46.13 5.24
1842 5472 2.577593 CCCTTCTCCCGGACGAAC 59.422 66.667 0.73 0.00 0.00 3.95
1999 8298 1.066573 CACGACATGGGCTTCTTCTCT 60.067 52.381 0.00 0.00 0.00 3.10
2005 8304 2.109126 GCCTCACGACATGGGCTTC 61.109 63.158 0.00 0.00 39.98 3.86
2012 8311 1.079819 CCGAACAGCCTCACGACAT 60.080 57.895 0.00 0.00 0.00 3.06
2075 8374 1.528129 CCTCTTGAACAACTCCAGCC 58.472 55.000 0.00 0.00 0.00 4.85
2100 8399 4.616181 AACCAAACATACTCGCTAATGC 57.384 40.909 0.00 0.00 0.00 3.56
2105 8404 2.621055 TGCAAAACCAAACATACTCGCT 59.379 40.909 0.00 0.00 0.00 4.93
2115 8414 3.883830 TTTCTCAGCTGCAAAACCAAA 57.116 38.095 9.47 0.00 0.00 3.28
2126 8425 5.072741 TGGTTTAGCAAAGATTTCTCAGCT 58.927 37.500 10.37 10.37 38.77 4.24
2127 8426 5.048434 ACTGGTTTAGCAAAGATTTCTCAGC 60.048 40.000 0.00 0.00 0.00 4.26
2129 8428 6.655003 CCTACTGGTTTAGCAAAGATTTCTCA 59.345 38.462 0.00 0.00 0.00 3.27
2164 11050 1.272807 TTTGGGAACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
2167 11053 1.838077 AGTATTTGGGAACGGAGGGAG 59.162 52.381 0.00 0.00 0.00 4.30
2168 11054 1.961133 AGTATTTGGGAACGGAGGGA 58.039 50.000 0.00 0.00 0.00 4.20
2169 11055 2.290705 ACAAGTATTTGGGAACGGAGGG 60.291 50.000 2.81 0.00 38.66 4.30
2170 11056 3.007635 GACAAGTATTTGGGAACGGAGG 58.992 50.000 2.81 0.00 38.66 4.30
2171 11057 3.939066 AGACAAGTATTTGGGAACGGAG 58.061 45.455 2.81 0.00 38.66 4.63
2172 11058 4.360951 AAGACAAGTATTTGGGAACGGA 57.639 40.909 2.81 0.00 38.66 4.69
2173 11059 4.760204 AGAAAGACAAGTATTTGGGAACGG 59.240 41.667 2.81 0.00 38.66 4.44
2174 11060 5.941948 AGAAAGACAAGTATTTGGGAACG 57.058 39.130 2.81 0.00 38.66 3.95
2175 11061 6.127980 GCCTAGAAAGACAAGTATTTGGGAAC 60.128 42.308 2.81 0.00 38.66 3.62
2176 11062 5.944007 GCCTAGAAAGACAAGTATTTGGGAA 59.056 40.000 2.81 0.00 38.66 3.97
2177 11063 5.013704 TGCCTAGAAAGACAAGTATTTGGGA 59.986 40.000 2.81 0.00 38.66 4.37
2178 11064 5.253330 TGCCTAGAAAGACAAGTATTTGGG 58.747 41.667 2.81 0.00 38.66 4.12
2179 11065 7.396540 AATGCCTAGAAAGACAAGTATTTGG 57.603 36.000 2.81 0.00 38.66 3.28
2180 11066 8.514594 TGAAATGCCTAGAAAGACAAGTATTTG 58.485 33.333 0.00 0.00 40.24 2.32
2181 11067 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
2182 11068 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
2183 11069 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
2184 11070 8.514594 CATTTGAAATGCCTAGAAAGACAAGTA 58.485 33.333 4.82 0.00 0.00 2.24
2185 11071 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
2186 11072 7.596494 TCATTTGAAATGCCTAGAAAGACAAG 58.404 34.615 12.86 0.00 0.00 3.16
2187 11073 7.523293 TCATTTGAAATGCCTAGAAAGACAA 57.477 32.000 12.86 0.00 0.00 3.18
2188 11074 7.231317 AGTTCATTTGAAATGCCTAGAAAGACA 59.769 33.333 12.86 0.00 35.58 3.41
2189 11075 7.597386 AGTTCATTTGAAATGCCTAGAAAGAC 58.403 34.615 12.86 1.62 35.58 3.01
2190 11076 7.448161 TGAGTTCATTTGAAATGCCTAGAAAGA 59.552 33.333 12.86 0.00 35.58 2.52
2191 11077 7.596494 TGAGTTCATTTGAAATGCCTAGAAAG 58.404 34.615 12.86 0.00 35.58 2.62
2192 11078 7.523293 TGAGTTCATTTGAAATGCCTAGAAA 57.477 32.000 12.86 0.00 35.58 2.52
2193 11079 7.014134 TGTTGAGTTCATTTGAAATGCCTAGAA 59.986 33.333 12.86 0.00 35.58 2.10
2194 11080 6.489700 TGTTGAGTTCATTTGAAATGCCTAGA 59.510 34.615 12.86 0.00 35.58 2.43
2195 11081 6.680810 TGTTGAGTTCATTTGAAATGCCTAG 58.319 36.000 12.86 0.00 35.58 3.02
2196 11082 6.647334 TGTTGAGTTCATTTGAAATGCCTA 57.353 33.333 12.86 0.00 35.58 3.93
2197 11083 5.534207 TGTTGAGTTCATTTGAAATGCCT 57.466 34.783 12.86 10.60 35.58 4.75
2198 11084 6.033831 CGTATGTTGAGTTCATTTGAAATGCC 59.966 38.462 12.86 6.22 35.58 4.40
2199 11085 6.033831 CCGTATGTTGAGTTCATTTGAAATGC 59.966 38.462 12.86 0.56 35.58 3.56
2200 11086 7.304735 TCCGTATGTTGAGTTCATTTGAAATG 58.695 34.615 11.54 11.54 35.58 2.32
2201 11087 7.447374 TCCGTATGTTGAGTTCATTTGAAAT 57.553 32.000 0.00 0.00 35.58 2.17
2202 11088 6.869315 TCCGTATGTTGAGTTCATTTGAAA 57.131 33.333 0.00 0.00 35.58 2.69
2203 11089 6.429692 ACATCCGTATGTTGAGTTCATTTGAA 59.570 34.615 0.00 0.00 44.07 2.69
2204 11090 5.937540 ACATCCGTATGTTGAGTTCATTTGA 59.062 36.000 0.00 0.00 44.07 2.69
2205 11091 6.182039 ACATCCGTATGTTGAGTTCATTTG 57.818 37.500 0.00 0.00 44.07 2.32
2206 11092 7.919690 CATACATCCGTATGTTGAGTTCATTT 58.080 34.615 0.00 0.00 46.70 2.32
2207 11093 7.482654 CATACATCCGTATGTTGAGTTCATT 57.517 36.000 0.00 0.00 46.70 2.57
2247 11133 4.091424 GCGCAAAATGAGTGAATCTACAC 58.909 43.478 0.30 0.00 40.60 2.90
2248 11134 3.126858 GGCGCAAAATGAGTGAATCTACA 59.873 43.478 10.83 0.00 0.00 2.74
2249 11135 3.685058 GGCGCAAAATGAGTGAATCTAC 58.315 45.455 10.83 0.00 0.00 2.59
2250 11136 2.351418 CGGCGCAAAATGAGTGAATCTA 59.649 45.455 10.83 0.00 0.00 1.98
2251 11137 1.131126 CGGCGCAAAATGAGTGAATCT 59.869 47.619 10.83 0.00 0.00 2.40
2252 11138 1.135689 ACGGCGCAAAATGAGTGAATC 60.136 47.619 10.83 0.00 0.00 2.52
2253 11139 0.881118 ACGGCGCAAAATGAGTGAAT 59.119 45.000 10.83 0.00 0.00 2.57
2254 11140 1.514003 TACGGCGCAAAATGAGTGAA 58.486 45.000 10.83 0.00 0.00 3.18
2255 11141 1.396648 CATACGGCGCAAAATGAGTGA 59.603 47.619 10.83 0.00 0.00 3.41
2256 11142 1.130373 ACATACGGCGCAAAATGAGTG 59.870 47.619 10.83 0.00 0.00 3.51
2257 11143 1.448985 ACATACGGCGCAAAATGAGT 58.551 45.000 10.83 0.00 0.00 3.41
2258 11144 2.607635 ACTACATACGGCGCAAAATGAG 59.392 45.455 10.83 10.39 0.00 2.90
2259 11145 2.605818 GACTACATACGGCGCAAAATGA 59.394 45.455 10.83 0.00 0.00 2.57
2260 11146 2.350192 TGACTACATACGGCGCAAAATG 59.650 45.455 10.83 11.57 0.00 2.32
2261 11147 2.623535 TGACTACATACGGCGCAAAAT 58.376 42.857 10.83 0.00 0.00 1.82
2262 11148 2.081725 TGACTACATACGGCGCAAAA 57.918 45.000 10.83 0.00 0.00 2.44
2263 11149 2.303163 ATGACTACATACGGCGCAAA 57.697 45.000 10.83 0.00 34.71 3.68
2264 11150 2.303163 AATGACTACATACGGCGCAA 57.697 45.000 10.83 0.00 35.50 4.85
2265 11151 1.930503 CAAATGACTACATACGGCGCA 59.069 47.619 10.83 0.00 35.50 6.09
2266 11152 1.931172 ACAAATGACTACATACGGCGC 59.069 47.619 6.90 0.00 35.50 6.53
2267 11153 3.615056 TCAACAAATGACTACATACGGCG 59.385 43.478 4.80 4.80 35.50 6.46
2268 11154 5.539582 TTCAACAAATGACTACATACGGC 57.460 39.130 0.00 0.00 37.92 5.68
2269 11155 7.974675 AGATTTCAACAAATGACTACATACGG 58.025 34.615 0.00 0.00 37.92 4.02
2270 11156 8.873830 AGAGATTTCAACAAATGACTACATACG 58.126 33.333 0.00 0.00 37.92 3.06
2274 11160 9.996554 TTCTAGAGATTTCAACAAATGACTACA 57.003 29.630 0.00 0.00 37.92 2.74
2277 11163 9.784531 TCTTTCTAGAGATTTCAACAAATGACT 57.215 29.630 0.00 0.00 37.92 3.41
2278 11164 9.818796 GTCTTTCTAGAGATTTCAACAAATGAC 57.181 33.333 0.00 0.00 37.92 3.06
2279 11165 9.559732 TGTCTTTCTAGAGATTTCAACAAATGA 57.440 29.630 0.00 0.00 31.94 2.57
2282 11168 9.396022 ACTTGTCTTTCTAGAGATTTCAACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2283 11169 8.964476 ACTTGTCTTTCTAGAGATTTCAACAA 57.036 30.769 0.00 0.00 0.00 2.83
2293 11179 9.291664 CGTTCCTAAATACTTGTCTTTCTAGAG 57.708 37.037 0.00 0.00 0.00 2.43
2294 11180 8.248945 CCGTTCCTAAATACTTGTCTTTCTAGA 58.751 37.037 0.00 0.00 0.00 2.43
2295 11181 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
2296 11182 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
2297 11183 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
2298 11184 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
2299 11185 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
2300 11186 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
2301 11187 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
2302 11188 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
2303 11189 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
2304 11190 4.694339 CTCCCTCCGTTCCTAAATACTTG 58.306 47.826 0.00 0.00 0.00 3.16
2305 11191 3.134262 GCTCCCTCCGTTCCTAAATACTT 59.866 47.826 0.00 0.00 0.00 2.24
2306 11192 2.699321 GCTCCCTCCGTTCCTAAATACT 59.301 50.000 0.00 0.00 0.00 2.12
2307 11193 2.433239 TGCTCCCTCCGTTCCTAAATAC 59.567 50.000 0.00 0.00 0.00 1.89
2308 11194 2.754465 TGCTCCCTCCGTTCCTAAATA 58.246 47.619 0.00 0.00 0.00 1.40
2309 11195 1.580059 TGCTCCCTCCGTTCCTAAAT 58.420 50.000 0.00 0.00 0.00 1.40
2310 11196 1.354101 TTGCTCCCTCCGTTCCTAAA 58.646 50.000 0.00 0.00 0.00 1.85
2311 11197 1.209504 CATTGCTCCCTCCGTTCCTAA 59.790 52.381 0.00 0.00 0.00 2.69
2312 11198 0.830648 CATTGCTCCCTCCGTTCCTA 59.169 55.000 0.00 0.00 0.00 2.94
2313 11199 1.201429 ACATTGCTCCCTCCGTTCCT 61.201 55.000 0.00 0.00 0.00 3.36
2314 11200 0.322546 AACATTGCTCCCTCCGTTCC 60.323 55.000 0.00 0.00 0.00 3.62
2315 11201 1.087501 GAACATTGCTCCCTCCGTTC 58.912 55.000 0.00 0.00 0.00 3.95
2316 11202 0.400213 TGAACATTGCTCCCTCCGTT 59.600 50.000 0.00 0.00 0.00 4.44
2317 11203 0.620556 ATGAACATTGCTCCCTCCGT 59.379 50.000 0.00 0.00 0.00 4.69
2318 11204 1.019673 CATGAACATTGCTCCCTCCG 58.980 55.000 0.00 0.00 0.00 4.63
2319 11205 2.425143 TCATGAACATTGCTCCCTCC 57.575 50.000 0.00 0.00 0.00 4.30
2320 11206 2.883386 GGATCATGAACATTGCTCCCTC 59.117 50.000 0.00 0.00 0.00 4.30
2321 11207 2.512896 AGGATCATGAACATTGCTCCCT 59.487 45.455 0.00 0.00 0.00 4.20
2322 11208 2.941480 AGGATCATGAACATTGCTCCC 58.059 47.619 0.00 0.00 0.00 4.30
2323 11209 5.357878 TGTTTAGGATCATGAACATTGCTCC 59.642 40.000 12.99 0.00 0.00 4.70
2324 11210 6.441093 TGTTTAGGATCATGAACATTGCTC 57.559 37.500 12.99 0.00 0.00 4.26
2325 11211 6.183360 CCATGTTTAGGATCATGAACATTGCT 60.183 38.462 23.05 5.59 42.52 3.91
2326 11212 5.981315 CCATGTTTAGGATCATGAACATTGC 59.019 40.000 23.05 0.00 42.52 3.56
2327 11213 6.976349 CACCATGTTTAGGATCATGAACATTG 59.024 38.462 23.05 21.61 42.52 2.82
2349 11235 1.544724 TTAAGCTCACAATGCCCACC 58.455 50.000 0.00 0.00 0.00 4.61
2444 11349 3.878778 AGCCATGTGAATGAACTACTCC 58.121 45.455 0.00 0.00 0.00 3.85
2445 11350 6.985188 TTTAGCCATGTGAATGAACTACTC 57.015 37.500 0.00 0.00 0.00 2.59
2446 11351 6.886459 ACATTTAGCCATGTGAATGAACTACT 59.114 34.615 7.54 0.00 35.97 2.57
2447 11352 7.088589 ACATTTAGCCATGTGAATGAACTAC 57.911 36.000 7.54 0.00 35.97 2.73
2485 11390 4.834534 TCCCCAAAATGAATGCAAATGAG 58.165 39.130 0.00 0.00 0.00 2.90
2612 11592 9.326413 CCCTTTTCGTATAACTGATGTAAGAAT 57.674 33.333 0.00 0.00 0.00 2.40
2613 11593 7.767198 CCCCTTTTCGTATAACTGATGTAAGAA 59.233 37.037 0.00 0.00 0.00 2.52
2614 11594 7.093201 ACCCCTTTTCGTATAACTGATGTAAGA 60.093 37.037 0.00 0.00 0.00 2.10
2615 11595 7.011109 CACCCCTTTTCGTATAACTGATGTAAG 59.989 40.741 0.00 0.00 0.00 2.34
2639 11619 6.743575 ACTCTTACAAATTATGCACTCCAC 57.256 37.500 0.00 0.00 0.00 4.02
2650 11630 8.025445 GCTTCATGATGACAACTCTTACAAATT 58.975 33.333 12.54 0.00 0.00 1.82
2652 11632 6.486320 TGCTTCATGATGACAACTCTTACAAA 59.514 34.615 12.54 0.00 0.00 2.83
2728 11723 6.998074 CAGTAGGGCCATGAACATTAATAGAA 59.002 38.462 6.18 0.00 0.00 2.10
2757 11752 8.023706 CGTGAAAGTATATGCTAGCAAGATCTA 58.976 37.037 23.54 9.60 0.00 1.98
2844 11843 9.182933 CGAGTGAGGCTATTCTTTAATAAGTAC 57.817 37.037 0.00 0.00 32.98 2.73
2853 11852 2.567615 ACCACGAGTGAGGCTATTCTTT 59.432 45.455 4.59 0.00 0.00 2.52
2994 11994 1.776662 CCCCCTCATGACTCGTTAGA 58.223 55.000 0.00 0.00 0.00 2.10
3027 12027 2.882137 TGCAAAGTAAAAAGGACCGGAG 59.118 45.455 9.46 0.00 0.00 4.63
3028 12028 2.619646 GTGCAAAGTAAAAAGGACCGGA 59.380 45.455 9.46 0.00 0.00 5.14
3029 12029 2.359531 TGTGCAAAGTAAAAAGGACCGG 59.640 45.455 0.00 0.00 0.00 5.28
3030 12030 3.701532 TGTGCAAAGTAAAAAGGACCG 57.298 42.857 0.00 0.00 0.00 4.79
3031 12031 4.749598 CCAATGTGCAAAGTAAAAAGGACC 59.250 41.667 0.00 0.00 0.00 4.46
3032 12032 5.596845 TCCAATGTGCAAAGTAAAAAGGAC 58.403 37.500 0.00 0.00 0.00 3.85
3033 12033 5.860941 TCCAATGTGCAAAGTAAAAAGGA 57.139 34.783 0.00 0.00 0.00 3.36
3034 12034 7.354257 CAAATCCAATGTGCAAAGTAAAAAGG 58.646 34.615 0.00 0.00 0.00 3.11
3035 12035 6.852345 GCAAATCCAATGTGCAAAGTAAAAAG 59.148 34.615 0.00 0.00 38.19 2.27
3036 12036 6.238593 GGCAAATCCAATGTGCAAAGTAAAAA 60.239 34.615 4.59 0.00 40.12 1.94
3037 12037 5.238214 GGCAAATCCAATGTGCAAAGTAAAA 59.762 36.000 4.59 0.00 40.12 1.52
3038 12038 4.754114 GGCAAATCCAATGTGCAAAGTAAA 59.246 37.500 4.59 0.00 40.12 2.01
3039 12039 4.314121 GGCAAATCCAATGTGCAAAGTAA 58.686 39.130 4.59 0.00 40.12 2.24
3040 12040 3.613671 CGGCAAATCCAATGTGCAAAGTA 60.614 43.478 4.59 0.00 40.12 2.24
3041 12041 2.769893 GGCAAATCCAATGTGCAAAGT 58.230 42.857 4.59 0.00 40.12 2.66
3042 12042 1.727880 CGGCAAATCCAATGTGCAAAG 59.272 47.619 4.59 0.00 40.12 2.77
3043 12043 1.342496 TCGGCAAATCCAATGTGCAAA 59.658 42.857 4.59 0.00 40.12 3.68
3044 12044 0.964700 TCGGCAAATCCAATGTGCAA 59.035 45.000 4.59 0.00 40.12 4.08
3045 12045 0.964700 TTCGGCAAATCCAATGTGCA 59.035 45.000 4.59 0.00 40.12 4.57
3046 12046 1.994779 CTTTCGGCAAATCCAATGTGC 59.005 47.619 0.00 0.00 37.55 4.57
3047 12047 3.244976 GACTTTCGGCAAATCCAATGTG 58.755 45.455 0.00 0.00 34.01 3.21
3048 12048 2.890311 TGACTTTCGGCAAATCCAATGT 59.110 40.909 0.00 0.00 34.01 2.71
3049 12049 3.574284 TGACTTTCGGCAAATCCAATG 57.426 42.857 0.00 0.00 34.01 2.82
3050 12050 4.039124 AGTTTGACTTTCGGCAAATCCAAT 59.961 37.500 0.00 0.00 36.51 3.16
3051 12051 3.383185 AGTTTGACTTTCGGCAAATCCAA 59.617 39.130 0.00 0.00 36.51 3.53
3052 12052 2.955660 AGTTTGACTTTCGGCAAATCCA 59.044 40.909 0.00 0.00 36.51 3.41
3053 12053 3.643159 AGTTTGACTTTCGGCAAATCC 57.357 42.857 0.00 0.00 36.51 3.01
3054 12054 4.318050 GCAAAGTTTGACTTTCGGCAAATC 60.318 41.667 19.82 0.00 44.47 2.17
3055 12055 3.555547 GCAAAGTTTGACTTTCGGCAAAT 59.444 39.130 19.82 0.00 44.47 2.32
3056 12056 2.926838 GCAAAGTTTGACTTTCGGCAAA 59.073 40.909 19.82 0.00 44.47 3.68
3057 12057 2.165437 AGCAAAGTTTGACTTTCGGCAA 59.835 40.909 19.82 0.00 44.47 4.52
3058 12058 1.748493 AGCAAAGTTTGACTTTCGGCA 59.252 42.857 19.82 0.00 44.47 5.69
3059 12059 2.492019 AGCAAAGTTTGACTTTCGGC 57.508 45.000 19.82 5.65 44.47 5.54
3060 12060 5.169836 ACTTAGCAAAGTTTGACTTTCGG 57.830 39.130 19.82 8.79 44.47 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.