Multiple sequence alignment - TraesCS5A01G497200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G497200 chr5A 100.000 8853 0 0 1 8853 664540941 664532089 0.000000e+00 16349.0
1 TraesCS5A01G497200 chr5A 92.000 600 36 8 4476 5067 32012214 32012809 0.000000e+00 832.0
2 TraesCS5A01G497200 chr5A 100.000 28 0 0 3477 3504 664537438 664537465 1.600000e-02 52.8
3 TraesCS5A01G497200 chr4B 90.638 4593 240 91 4069 8576 615777364 615772877 0.000000e+00 5925.0
4 TraesCS5A01G497200 chr4B 86.622 2093 131 67 613 2586 615780909 615778847 0.000000e+00 2176.0
5 TraesCS5A01G497200 chr4B 93.548 558 24 10 6 558 615781455 615780905 0.000000e+00 821.0
6 TraesCS5A01G497200 chr4B 88.360 567 37 19 3428 3985 615778067 615777521 0.000000e+00 654.0
7 TraesCS5A01G497200 chr4B 83.921 709 52 27 2583 3275 615778806 615778144 9.760000e-174 621.0
8 TraesCS5A01G497200 chr4D 92.031 3564 171 50 5078 8576 484272013 484268498 0.000000e+00 4903.0
9 TraesCS5A01G497200 chr4D 86.417 3394 203 109 2 3228 484277094 484273792 0.000000e+00 3476.0
10 TraesCS5A01G497200 chr4D 90.145 1654 101 36 3428 5045 484273644 484272017 0.000000e+00 2095.0
11 TraesCS5A01G497200 chr6A 92.257 607 34 9 4469 5067 439515419 439516020 0.000000e+00 848.0
12 TraesCS5A01G497200 chr6A 91.892 111 9 0 3273 3383 394506103 394506213 1.190000e-33 156.0
13 TraesCS5A01G497200 chr2A 92.384 604 33 9 4472 5067 164918350 164917752 0.000000e+00 848.0
14 TraesCS5A01G497200 chr2A 92.105 608 33 11 4472 5069 780183315 780182713 0.000000e+00 843.0
15 TraesCS5A01G497200 chr2A 92.727 110 8 0 3274 3383 35967825 35967934 9.200000e-35 159.0
16 TraesCS5A01G497200 chr2A 90.517 116 10 1 3268 3383 507071277 507071163 1.540000e-32 152.0
17 TraesCS5A01G497200 chr2A 87.121 132 15 2 3262 3391 120177790 120177659 1.990000e-31 148.0
18 TraesCS5A01G497200 chr4A 92.359 602 33 10 4472 5065 411855689 411855093 0.000000e+00 845.0
19 TraesCS5A01G497200 chr4A 88.618 123 13 1 3271 3393 322189981 322190102 1.990000e-31 148.0
20 TraesCS5A01G497200 chr3B 89.570 604 30 14 4469 5067 83159070 83159645 0.000000e+00 736.0
21 TraesCS5A01G497200 chr5B 89.517 601 30 14 4472 5067 400140593 400140021 0.000000e+00 730.0
22 TraesCS5A01G497200 chr3D 89.505 505 24 11 4472 4972 216614225 216613746 5.880000e-171 612.0
23 TraesCS5A01G497200 chr7A 92.241 116 8 1 3269 3383 82179639 82179754 7.110000e-36 163.0
24 TraesCS5A01G497200 chr7A 90.756 119 10 1 3274 3392 513985913 513985796 3.310000e-34 158.0
25 TraesCS5A01G497200 chr7A 90.909 110 10 0 3274 3383 15083174 15083283 1.990000e-31 148.0
26 TraesCS5A01G497200 chr1A 92.523 107 8 0 3277 3383 441770370 441770476 4.280000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G497200 chr5A 664532089 664540941 8852 True 16349.000000 16349 100.0000 1 8853 1 chr5A.!!$R1 8852
1 TraesCS5A01G497200 chr5A 32012214 32012809 595 False 832.000000 832 92.0000 4476 5067 1 chr5A.!!$F1 591
2 TraesCS5A01G497200 chr4B 615772877 615781455 8578 True 2039.400000 5925 88.6178 6 8576 5 chr4B.!!$R1 8570
3 TraesCS5A01G497200 chr4D 484268498 484277094 8596 True 3491.333333 4903 89.5310 2 8576 3 chr4D.!!$R1 8574
4 TraesCS5A01G497200 chr6A 439515419 439516020 601 False 848.000000 848 92.2570 4469 5067 1 chr6A.!!$F2 598
5 TraesCS5A01G497200 chr2A 164917752 164918350 598 True 848.000000 848 92.3840 4472 5067 1 chr2A.!!$R2 595
6 TraesCS5A01G497200 chr2A 780182713 780183315 602 True 843.000000 843 92.1050 4472 5069 1 chr2A.!!$R4 597
7 TraesCS5A01G497200 chr4A 411855093 411855689 596 True 845.000000 845 92.3590 4472 5065 1 chr4A.!!$R1 593
8 TraesCS5A01G497200 chr3B 83159070 83159645 575 False 736.000000 736 89.5700 4469 5067 1 chr3B.!!$F1 598
9 TraesCS5A01G497200 chr5B 400140021 400140593 572 True 730.000000 730 89.5170 4472 5067 1 chr5B.!!$R1 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
693 713 0.707024 TATTCATTGGGGTGGGCACA 59.293 50.0 0.00 0.0 0.00 4.57 F
1537 1595 0.039472 TGCCCCTTTGCATGCTTAGA 59.961 50.0 20.33 0.0 36.04 2.10 F
3083 3357 0.036022 GCACCAAGCTGTTCTCTCCT 59.964 55.0 0.00 0.0 41.15 3.69 F
3789 4134 0.034670 ATGCCTCCTGCTTCTTGGTC 60.035 55.0 0.00 0.0 42.00 4.02 F
5467 5946 0.038744 AAGAGGAGCAATGGTGGTGG 59.961 55.0 0.00 0.0 35.00 4.61 F
5729 6226 0.109272 ACGCGCATTCGAGAAGAAGA 60.109 50.0 5.73 0.0 42.92 2.87 F
6407 6925 0.320421 CGAGGAAGGGCGACAAGAAA 60.320 55.0 0.00 0.0 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2641 2899 0.249741 ACCGTGTGTCCACAGCTTAC 60.250 55.000 0.00 0.0 42.74 2.34 R
3394 3706 0.402121 GCTTTCCCACCCTCTTCTGT 59.598 55.000 0.00 0.0 0.00 3.41 R
4440 4879 0.401738 CCAGGACTGTCACCACCAAT 59.598 55.000 10.38 0.0 0.00 3.16 R
5636 6115 0.029567 GTACGATCTCCGAGCACCTG 59.970 60.000 0.00 0.0 41.76 4.00 R
6694 7212 0.621862 ATCCTTCCTCCCTTTCGGCT 60.622 55.000 0.00 0.0 0.00 5.52 R
7240 7763 1.065636 TCAGCTTGATCTTGCTCCAGG 60.066 52.381 9.48 1.2 37.44 4.45 R
8132 8663 0.687354 CCACCAGTGTTACCTGCTCT 59.313 55.000 0.00 0.0 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 51 4.452455 CCGTTTTGCTTATTCTCACTGTCT 59.548 41.667 0.00 0.00 0.00 3.41
95 98 3.306919 CCCAAAACTGCATGCCATTTAGT 60.307 43.478 16.68 8.63 0.00 2.24
100 103 3.894759 ACTGCATGCCATTTAGTCTGAT 58.105 40.909 16.68 0.00 0.00 2.90
137 141 8.788806 TGTTCGATTTTATCAAACATAACTGGT 58.211 29.630 0.00 0.00 31.71 4.00
138 142 9.061610 GTTCGATTTTATCAAACATAACTGGTG 57.938 33.333 0.00 0.00 0.00 4.17
200 211 6.357367 GGATGGTGGTTTAGACATATGACTT 58.643 40.000 12.86 0.00 0.00 3.01
209 220 7.171678 GGTTTAGACATATGACTTATCAGGCAC 59.828 40.741 12.86 0.00 42.68 5.01
210 221 7.603180 TTAGACATATGACTTATCAGGCACT 57.397 36.000 12.86 0.00 42.68 4.40
257 271 9.603921 AGGTTGGCAATCAAAATAAATCTTATG 57.396 29.630 13.85 0.00 37.08 1.90
399 413 3.007635 GCGCCTATAAACAAACTGGAGT 58.992 45.455 0.00 0.00 0.00 3.85
446 460 5.813672 TCCGTAGTAAGATGCATGTAAAACC 59.186 40.000 2.46 0.00 0.00 3.27
448 462 5.276678 CGTAGTAAGATGCATGTAAAACCCG 60.277 44.000 2.46 2.09 0.00 5.28
469 483 1.133598 TGCATAGGTTACCGTCTGACG 59.866 52.381 22.49 22.49 42.11 4.35
499 514 3.294214 AGATGATTGATGGGTTCTTGCC 58.706 45.455 0.00 0.00 0.00 4.52
519 534 3.509575 GCCCCTACATTCACAATTGTTCA 59.490 43.478 8.77 0.00 0.00 3.18
520 535 4.021544 GCCCCTACATTCACAATTGTTCAA 60.022 41.667 8.77 5.26 0.00 2.69
521 536 5.713025 CCCCTACATTCACAATTGTTCAAG 58.287 41.667 8.77 2.42 0.00 3.02
527 542 6.732154 ACATTCACAATTGTTCAAGAGTCTG 58.268 36.000 8.77 2.76 0.00 3.51
557 572 3.508012 ACTACTGCTCAGACACCTTGTAG 59.492 47.826 3.60 0.00 34.22 2.74
563 578 2.036475 CTCAGACACCTTGTAGTGCAGT 59.964 50.000 0.00 0.00 41.67 4.40
667 683 0.871722 TTTTCACCGGAAGATGCACG 59.128 50.000 9.46 0.00 33.82 5.34
683 703 5.410746 AGATGCACGAGCTATTATTCATTGG 59.589 40.000 6.36 0.00 42.74 3.16
691 711 2.864885 ATTATTCATTGGGGTGGGCA 57.135 45.000 0.00 0.00 0.00 5.36
693 713 0.707024 TATTCATTGGGGTGGGCACA 59.293 50.000 0.00 0.00 0.00 4.57
702 722 1.824852 GGGGTGGGCACAGAATTAAAG 59.175 52.381 0.00 0.00 0.00 1.85
703 723 2.525368 GGGTGGGCACAGAATTAAAGT 58.475 47.619 0.00 0.00 0.00 2.66
704 724 2.231235 GGGTGGGCACAGAATTAAAGTG 59.769 50.000 0.00 0.00 36.39 3.16
705 725 2.890945 GGTGGGCACAGAATTAAAGTGT 59.109 45.455 0.00 0.00 35.75 3.55
841 862 4.676196 GCAAATTGCAAGTGATTCGAGGAT 60.676 41.667 13.73 0.00 44.26 3.24
847 868 3.740321 GCAAGTGATTCGAGGATCATCTC 59.260 47.826 5.74 0.00 38.25 2.75
883 905 9.765795 TTTTTATGGTGGTGTTTTAACTATTGG 57.234 29.630 0.00 0.00 0.00 3.16
965 987 3.916392 GATACGGCGGCCCATCGAG 62.916 68.421 14.55 0.00 0.00 4.04
1034 1056 3.036084 CGGACCGGATACATGCGC 61.036 66.667 9.46 0.00 40.45 6.09
1059 1081 0.674895 ACGCAAGATGGAGCTGGAAC 60.675 55.000 0.00 0.00 43.62 3.62
1060 1082 0.674581 CGCAAGATGGAGCTGGAACA 60.675 55.000 0.00 0.00 43.02 3.18
1086 1108 0.744771 GAGGGCTCCACGGACAAATC 60.745 60.000 0.00 0.00 0.00 2.17
1167 1190 3.054802 AGCCTTGAATTCATTCTCTCCGT 60.055 43.478 9.40 0.00 37.67 4.69
1169 1192 4.876107 GCCTTGAATTCATTCTCTCCGTAA 59.124 41.667 9.40 0.00 37.67 3.18
1184 1211 8.256611 TCTCTCCGTAAAAATTGAAGATGAAG 57.743 34.615 0.00 0.00 0.00 3.02
1188 1215 9.846248 CTCCGTAAAAATTGAAGATGAAGAAAT 57.154 29.630 0.00 0.00 0.00 2.17
1224 1251 4.717991 CGAACTCATAAACATTTGCCGAA 58.282 39.130 0.00 0.00 0.00 4.30
1227 1254 6.021468 CGAACTCATAAACATTTGCCGAATTC 60.021 38.462 0.00 0.00 0.00 2.17
1274 1302 6.478344 GCTGTTAGGATAATGTCACTGAAGAG 59.522 42.308 0.00 0.00 0.00 2.85
1289 1317 9.555727 GTCACTGAAGAGTAGATAGAGTAATCT 57.444 37.037 0.00 0.00 39.54 2.40
1327 1357 2.161486 GGTCGACAGCACAGCGATC 61.161 63.158 18.91 0.00 36.37 3.69
1367 1397 2.601367 GCAATGTGGGCTGTGGGT 60.601 61.111 0.00 0.00 0.00 4.51
1368 1398 2.934570 GCAATGTGGGCTGTGGGTG 61.935 63.158 0.00 0.00 0.00 4.61
1369 1399 1.531365 CAATGTGGGCTGTGGGTGT 60.531 57.895 0.00 0.00 0.00 4.16
1463 1499 8.143193 GGGTTAACTAGTTTATAAGCTCCTCTC 58.857 40.741 14.49 0.00 0.00 3.20
1464 1500 8.916062 GGTTAACTAGTTTATAAGCTCCTCTCT 58.084 37.037 14.49 0.00 0.00 3.10
1465 1501 9.955208 GTTAACTAGTTTATAAGCTCCTCTCTC 57.045 37.037 14.49 0.00 0.00 3.20
1467 1503 8.459911 AACTAGTTTATAAGCTCCTCTCTCTC 57.540 38.462 4.97 0.00 0.00 3.20
1468 1504 7.812306 ACTAGTTTATAAGCTCCTCTCTCTCT 58.188 38.462 4.97 0.00 0.00 3.10
1469 1505 7.937394 ACTAGTTTATAAGCTCCTCTCTCTCTC 59.063 40.741 4.97 0.00 0.00 3.20
1537 1595 0.039472 TGCCCCTTTGCATGCTTAGA 59.961 50.000 20.33 0.00 36.04 2.10
1672 1734 2.165030 GGCTGCTGCTCATTTGTGTATT 59.835 45.455 15.64 0.00 39.59 1.89
1673 1735 3.367703 GGCTGCTGCTCATTTGTGTATTT 60.368 43.478 15.64 0.00 39.59 1.40
1674 1736 3.855950 GCTGCTGCTCATTTGTGTATTTC 59.144 43.478 8.53 0.00 36.03 2.17
1675 1737 4.616604 GCTGCTGCTCATTTGTGTATTTCA 60.617 41.667 8.53 0.00 36.03 2.69
1825 1902 2.545526 CTGTGTCAGTTGGCAGTAGTTG 59.454 50.000 0.00 0.00 0.00 3.16
1829 1906 1.071699 TCAGTTGGCAGTAGTTGGGTC 59.928 52.381 0.00 0.00 0.00 4.46
1839 1916 4.740934 GCAGTAGTTGGGTCAGATGGATAC 60.741 50.000 0.00 0.00 0.00 2.24
1887 1968 1.878656 AACGAGGAGGCGACCTTGAG 61.879 60.000 21.66 12.65 42.42 3.02
1888 1969 2.046864 CGAGGAGGCGACCTTGAGA 61.047 63.158 13.31 0.00 42.42 3.27
1889 1970 1.595993 CGAGGAGGCGACCTTGAGAA 61.596 60.000 13.31 0.00 42.42 2.87
1890 1971 0.608640 GAGGAGGCGACCTTGAGAAA 59.391 55.000 7.62 0.00 40.73 2.52
1949 2030 1.145325 TGCATCATGGCCATCATACCA 59.855 47.619 17.61 6.65 41.06 3.25
1951 2032 1.808343 CATCATGGCCATCATACCACG 59.192 52.381 17.61 1.59 39.19 4.94
1988 2069 1.471851 CGATGTAATGTACACGCCCCA 60.472 52.381 0.00 0.00 42.23 4.96
1998 2079 4.382291 TGTACACGCCCCATTGTATTATC 58.618 43.478 0.00 0.00 31.05 1.75
2064 2152 1.084289 GCCGCTAACCAACTAACCAG 58.916 55.000 0.00 0.00 0.00 4.00
2101 2214 3.133542 TCCATCAGACCATCACTAAGCTG 59.866 47.826 0.00 0.00 0.00 4.24
2123 2241 6.530887 GCTGGTAGTAGAACTAGTAAACAAGC 59.469 42.308 0.00 0.00 30.12 4.01
2143 2265 2.061773 CCGTAGAGCAGACAGTTGTTG 58.938 52.381 0.00 0.00 0.00 3.33
2216 2350 4.467084 TGCGAGGGACATTCCGGC 62.467 66.667 0.00 0.00 37.43 6.13
2219 2353 2.124695 GAGGGACATTCCGGCCAC 60.125 66.667 2.24 0.00 37.43 5.01
2250 2384 2.202756 AGGCGACGCGGAAATCTC 60.203 61.111 14.61 0.00 0.00 2.75
2381 2563 2.303022 GGGAGGAGATCGCCATTGAATA 59.697 50.000 18.44 0.00 37.03 1.75
2383 2565 4.566488 GGGAGGAGATCGCCATTGAATAAT 60.566 45.833 18.44 0.00 37.03 1.28
2384 2566 4.394300 GGAGGAGATCGCCATTGAATAATG 59.606 45.833 18.44 0.00 42.66 1.90
2385 2567 5.233083 AGGAGATCGCCATTGAATAATGA 57.767 39.130 18.44 0.00 45.21 2.57
2387 2569 6.243900 AGGAGATCGCCATTGAATAATGAAT 58.756 36.000 18.44 0.00 45.21 2.57
2388 2570 6.373774 AGGAGATCGCCATTGAATAATGAATC 59.626 38.462 18.44 3.01 45.21 2.52
2389 2571 6.174451 AGATCGCCATTGAATAATGAATCG 57.826 37.500 1.80 3.31 45.21 3.34
2504 2686 3.321111 CCTGCTGGTAATATACGTCTGGT 59.679 47.826 0.51 0.00 0.00 4.00
2586 2800 2.435059 GAGAAGGACGCAGGGCAC 60.435 66.667 0.00 0.00 0.00 5.01
2587 2801 3.240134 GAGAAGGACGCAGGGCACA 62.240 63.158 0.00 0.00 0.00 4.57
2589 2803 2.360350 AAGGACGCAGGGCACATG 60.360 61.111 0.00 0.00 0.00 3.21
2641 2899 5.577554 TCATCGCCATCAAAACAATCATTTG 59.422 36.000 0.00 0.00 38.76 2.32
2668 2926 1.301401 GGACACACGGTGCAAGCTA 60.301 57.895 8.30 0.00 37.84 3.32
2671 2931 2.034879 CACACGGTGCAAGCTAGGG 61.035 63.158 8.30 0.00 0.00 3.53
2672 2932 2.214216 ACACGGTGCAAGCTAGGGA 61.214 57.895 8.30 0.00 0.00 4.20
2674 2934 1.091771 CACGGTGCAAGCTAGGGATG 61.092 60.000 0.00 0.00 0.00 3.51
2675 2935 1.264749 ACGGTGCAAGCTAGGGATGA 61.265 55.000 0.00 0.00 0.00 2.92
2677 2937 1.475751 CGGTGCAAGCTAGGGATGATT 60.476 52.381 0.00 0.00 0.00 2.57
2678 2938 2.224281 CGGTGCAAGCTAGGGATGATTA 60.224 50.000 0.00 0.00 0.00 1.75
2679 2939 3.142174 GGTGCAAGCTAGGGATGATTAC 58.858 50.000 0.00 0.00 0.00 1.89
2680 2940 3.142174 GTGCAAGCTAGGGATGATTACC 58.858 50.000 0.00 0.00 0.00 2.85
2712 2976 0.740516 CGCCCAAATGTGGCCATTTC 60.741 55.000 9.72 0.00 45.92 2.17
2734 2999 2.608970 TAAGCTGGCCTTGGCGGATC 62.609 60.000 3.32 0.00 36.53 3.36
2748 3017 1.148157 CGGATCTGCTGTACGGCTTG 61.148 60.000 26.36 18.54 0.00 4.01
2776 3045 1.090052 GGAACGATTCTCCCGCCTTG 61.090 60.000 0.00 0.00 0.00 3.61
2793 3062 8.308931 TCCCGCCTTGTATTAATATACTGTTAG 58.691 37.037 0.00 0.00 37.97 2.34
2811 3080 8.874744 ACTGTTAGTCTGTACTGGAGTATTAA 57.125 34.615 0.00 0.00 36.36 1.40
2812 3081 8.738106 ACTGTTAGTCTGTACTGGAGTATTAAC 58.262 37.037 0.00 0.24 36.36 2.01
2833 3102 8.893563 TTAACAAAAGATGGGAGAATTGGTAT 57.106 30.769 0.00 0.00 0.00 2.73
2870 3139 4.079615 TCTCATCCAATTCCCACATGACAT 60.080 41.667 0.00 0.00 0.00 3.06
2872 3141 2.737544 TCCAATTCCCACATGACATGG 58.262 47.619 19.39 4.23 36.94 3.66
2880 3149 2.420547 CCCACATGACATGGTCGATTCT 60.421 50.000 19.39 0.00 35.23 2.40
2931 3200 3.690745 GGAAACGGACGAGGAGGA 58.309 61.111 0.00 0.00 0.00 3.71
2932 3201 1.511768 GGAAACGGACGAGGAGGAG 59.488 63.158 0.00 0.00 0.00 3.69
2937 3206 3.844090 GGACGAGGAGGAGGCAGC 61.844 72.222 0.00 0.00 0.00 5.25
2938 3207 3.071206 GACGAGGAGGAGGCAGCA 61.071 66.667 0.00 0.00 0.00 4.41
2942 3211 3.678951 GAGGAGGAGGCAGCAGCAC 62.679 68.421 2.65 0.00 44.61 4.40
2945 3214 3.972971 GAGGAGGCAGCAGCACCAG 62.973 68.421 16.07 0.00 44.61 4.00
3025 3294 1.375523 CCGCACCAACCACTCCTAC 60.376 63.158 0.00 0.00 0.00 3.18
3030 3299 1.276421 CACCAACCACTCCTACTCCTG 59.724 57.143 0.00 0.00 0.00 3.86
3031 3300 0.905357 CCAACCACTCCTACTCCTGG 59.095 60.000 0.00 0.00 0.00 4.45
3032 3301 0.905357 CAACCACTCCTACTCCTGGG 59.095 60.000 0.00 0.00 0.00 4.45
3041 3310 1.623163 CTACTCCTGGGTAGCTAGCC 58.377 60.000 31.01 31.01 43.95 3.93
3076 3350 4.927782 TCGCCGCACCAAGCTGTT 62.928 61.111 0.00 0.00 42.61 3.16
3081 3355 1.294659 CCGCACCAAGCTGTTCTCTC 61.295 60.000 0.00 0.00 42.61 3.20
3082 3356 1.294659 CGCACCAAGCTGTTCTCTCC 61.295 60.000 0.00 0.00 42.61 3.71
3083 3357 0.036022 GCACCAAGCTGTTCTCTCCT 59.964 55.000 0.00 0.00 41.15 3.69
3084 3358 1.943507 GCACCAAGCTGTTCTCTCCTC 60.944 57.143 0.00 0.00 41.15 3.71
3085 3359 1.622811 CACCAAGCTGTTCTCTCCTCT 59.377 52.381 0.00 0.00 0.00 3.69
3102 3376 9.206690 TCTCTCCTCTTCAATCAATAACATAGT 57.793 33.333 0.00 0.00 0.00 2.12
3241 3553 1.508088 CGGAGAAAATGGCAGCACC 59.492 57.895 0.00 0.00 39.84 5.01
3272 3584 3.299020 GGCGTTTCCGATTATCGTATACG 59.701 47.826 19.23 19.23 38.40 3.06
3273 3585 3.908382 GCGTTTCCGATTATCGTATACGT 59.092 43.478 23.67 13.96 38.40 3.57
3274 3586 5.079406 GCGTTTCCGATTATCGTATACGTA 58.921 41.667 23.67 13.02 38.40 3.57
3275 3587 5.223906 GCGTTTCCGATTATCGTATACGTAG 59.776 44.000 23.67 6.02 38.40 3.51
3278 3590 7.419923 CGTTTCCGATTATCGTATACGTAGTAC 59.580 40.741 23.67 12.96 41.95 2.73
3280 3592 7.742019 TCCGATTATCGTATACGTAGTACTC 57.258 40.000 23.67 16.07 41.95 2.59
3281 3593 6.752351 TCCGATTATCGTATACGTAGTACTCC 59.248 42.308 23.67 7.20 41.95 3.85
3282 3594 6.754209 CCGATTATCGTATACGTAGTACTCCT 59.246 42.308 23.67 2.09 41.95 3.69
3284 3596 8.317460 CGATTATCGTATACGTAGTACTCCTTC 58.683 40.741 23.67 8.30 39.74 3.46
3290 3602 2.087646 ACGTAGTACTCCTTCCGTTCC 58.912 52.381 0.00 0.00 41.94 3.62
3291 3603 2.086869 CGTAGTACTCCTTCCGTTCCA 58.913 52.381 0.00 0.00 0.00 3.53
3292 3604 2.489329 CGTAGTACTCCTTCCGTTCCAA 59.511 50.000 0.00 0.00 0.00 3.53
3293 3605 3.057315 CGTAGTACTCCTTCCGTTCCAAA 60.057 47.826 0.00 0.00 0.00 3.28
3294 3606 4.381292 CGTAGTACTCCTTCCGTTCCAAAT 60.381 45.833 0.00 0.00 0.00 2.32
3295 3607 4.635699 AGTACTCCTTCCGTTCCAAATT 57.364 40.909 0.00 0.00 0.00 1.82
3296 3608 5.750352 AGTACTCCTTCCGTTCCAAATTA 57.250 39.130 0.00 0.00 0.00 1.40
3297 3609 5.485620 AGTACTCCTTCCGTTCCAAATTAC 58.514 41.667 0.00 0.00 0.00 1.89
3298 3610 4.635699 ACTCCTTCCGTTCCAAATTACT 57.364 40.909 0.00 0.00 0.00 2.24
3299 3611 4.981812 ACTCCTTCCGTTCCAAATTACTT 58.018 39.130 0.00 0.00 0.00 2.24
3301 3613 4.721132 TCCTTCCGTTCCAAATTACTTGT 58.279 39.130 0.00 0.00 32.65 3.16
3304 3616 5.704053 CCTTCCGTTCCAAATTACTTGTAGT 59.296 40.000 0.00 0.00 32.65 2.73
3305 3617 6.875195 CCTTCCGTTCCAAATTACTTGTAGTA 59.125 38.462 0.00 0.00 32.65 1.82
3306 3618 7.064253 CCTTCCGTTCCAAATTACTTGTAGTAG 59.936 40.741 0.00 0.00 31.47 2.57
3308 3620 6.014327 TCCGTTCCAAATTACTTGTAGTAGGT 60.014 38.462 0.00 0.00 31.47 3.08
3310 3622 7.983484 CCGTTCCAAATTACTTGTAGTAGGTAT 59.017 37.037 0.00 0.00 31.47 2.73
3356 3668 7.706281 AGTTCTAGATACATTCATTTCTGCG 57.294 36.000 0.00 0.00 0.00 5.18
3357 3669 7.492524 AGTTCTAGATACATTCATTTCTGCGA 58.507 34.615 0.00 0.00 0.00 5.10
3358 3670 7.436673 AGTTCTAGATACATTCATTTCTGCGAC 59.563 37.037 0.00 0.00 0.00 5.19
3359 3671 5.915196 TCTAGATACATTCATTTCTGCGACG 59.085 40.000 0.00 0.00 0.00 5.12
3360 3672 4.682787 AGATACATTCATTTCTGCGACGA 58.317 39.130 0.00 0.00 0.00 4.20
3361 3673 4.742167 AGATACATTCATTTCTGCGACGAG 59.258 41.667 0.00 0.00 0.00 4.18
3362 3674 2.688507 ACATTCATTTCTGCGACGAGT 58.311 42.857 0.00 0.00 0.00 4.18
3363 3675 3.845178 ACATTCATTTCTGCGACGAGTA 58.155 40.909 0.00 0.00 0.00 2.59
3364 3676 4.242475 ACATTCATTTCTGCGACGAGTAA 58.758 39.130 0.00 0.00 0.00 2.24
3365 3677 4.870426 ACATTCATTTCTGCGACGAGTAAT 59.130 37.500 0.00 0.00 0.00 1.89
3366 3678 5.351465 ACATTCATTTCTGCGACGAGTAATT 59.649 36.000 0.00 0.00 0.00 1.40
3367 3679 5.856126 TTCATTTCTGCGACGAGTAATTT 57.144 34.783 0.00 0.00 0.00 1.82
3368 3680 6.954616 TTCATTTCTGCGACGAGTAATTTA 57.045 33.333 0.00 0.00 0.00 1.40
3369 3681 6.569228 TCATTTCTGCGACGAGTAATTTAG 57.431 37.500 0.00 0.00 0.00 1.85
3370 3682 6.327154 TCATTTCTGCGACGAGTAATTTAGA 58.673 36.000 0.00 0.00 0.00 2.10
3371 3683 6.809689 TCATTTCTGCGACGAGTAATTTAGAA 59.190 34.615 0.00 0.00 0.00 2.10
3372 3684 6.385537 TTTCTGCGACGAGTAATTTAGAAC 57.614 37.500 0.00 0.00 0.00 3.01
3373 3685 5.050644 TCTGCGACGAGTAATTTAGAACA 57.949 39.130 0.00 0.00 0.00 3.18
3374 3686 5.093457 TCTGCGACGAGTAATTTAGAACAG 58.907 41.667 0.00 0.00 0.00 3.16
3375 3687 5.050644 TGCGACGAGTAATTTAGAACAGA 57.949 39.130 0.00 0.00 0.00 3.41
3376 3688 5.093457 TGCGACGAGTAATTTAGAACAGAG 58.907 41.667 0.00 0.00 0.00 3.35
3377 3689 4.499758 GCGACGAGTAATTTAGAACAGAGG 59.500 45.833 0.00 0.00 0.00 3.69
3378 3690 5.035443 CGACGAGTAATTTAGAACAGAGGG 58.965 45.833 0.00 0.00 0.00 4.30
3379 3691 5.163683 CGACGAGTAATTTAGAACAGAGGGA 60.164 44.000 0.00 0.00 0.00 4.20
3380 3692 6.210287 ACGAGTAATTTAGAACAGAGGGAG 57.790 41.667 0.00 0.00 0.00 4.30
3381 3693 5.715753 ACGAGTAATTTAGAACAGAGGGAGT 59.284 40.000 0.00 0.00 0.00 3.85
3382 3694 6.888632 ACGAGTAATTTAGAACAGAGGGAGTA 59.111 38.462 0.00 0.00 0.00 2.59
3383 3695 7.395489 ACGAGTAATTTAGAACAGAGGGAGTAA 59.605 37.037 0.00 0.00 0.00 2.24
3384 3696 7.916450 CGAGTAATTTAGAACAGAGGGAGTAAG 59.084 40.741 0.00 0.00 0.00 2.34
3385 3697 8.667592 AGTAATTTAGAACAGAGGGAGTAAGT 57.332 34.615 0.00 0.00 0.00 2.24
3386 3698 9.102453 AGTAATTTAGAACAGAGGGAGTAAGTT 57.898 33.333 0.00 0.00 0.00 2.66
3389 3701 8.667592 ATTTAGAACAGAGGGAGTAAGTTAGT 57.332 34.615 0.00 0.00 0.00 2.24
3390 3702 9.765295 ATTTAGAACAGAGGGAGTAAGTTAGTA 57.235 33.333 0.00 0.00 0.00 1.82
3391 3703 9.592196 TTTAGAACAGAGGGAGTAAGTTAGTAA 57.408 33.333 0.00 0.00 0.00 2.24
3392 3704 9.765295 TTAGAACAGAGGGAGTAAGTTAGTAAT 57.235 33.333 0.00 0.00 0.00 1.89
3393 3705 8.667592 AGAACAGAGGGAGTAAGTTAGTAATT 57.332 34.615 0.00 0.00 0.00 1.40
3394 3706 9.765295 AGAACAGAGGGAGTAAGTTAGTAATTA 57.235 33.333 0.00 0.00 0.00 1.40
3395 3707 9.800433 GAACAGAGGGAGTAAGTTAGTAATTAC 57.200 37.037 7.57 7.57 33.06 1.89
3396 3708 8.890410 ACAGAGGGAGTAAGTTAGTAATTACA 57.110 34.615 17.65 1.42 34.91 2.41
3397 3709 8.968969 ACAGAGGGAGTAAGTTAGTAATTACAG 58.031 37.037 17.65 0.00 34.91 2.74
3398 3710 9.186837 CAGAGGGAGTAAGTTAGTAATTACAGA 57.813 37.037 17.65 2.43 34.91 3.41
3399 3711 9.765295 AGAGGGAGTAAGTTAGTAATTACAGAA 57.235 33.333 17.65 8.38 34.91 3.02
3414 3726 0.695347 CAGAAGAGGGTGGGAAAGCT 59.305 55.000 0.00 0.00 0.00 3.74
3415 3727 1.909302 CAGAAGAGGGTGGGAAAGCTA 59.091 52.381 0.00 0.00 0.00 3.32
3416 3728 2.093235 CAGAAGAGGGTGGGAAAGCTAG 60.093 54.545 0.00 0.00 0.00 3.42
3419 3731 1.612442 AGGGTGGGAAAGCTAGCGA 60.612 57.895 9.55 0.00 0.00 4.93
3483 3806 4.175337 CCCGTCCCGTCCATGCAT 62.175 66.667 0.00 0.00 0.00 3.96
3559 3886 1.230635 CCGCCATTCATAAGCCTCGG 61.231 60.000 0.00 0.00 0.00 4.63
3592 3931 1.830477 AGCGCCATCTCTTCTTCTCTT 59.170 47.619 2.29 0.00 0.00 2.85
3601 3940 3.009695 TCTCTTCTTCTCTTCTCCTCCGT 59.990 47.826 0.00 0.00 0.00 4.69
3613 3952 4.581105 CTCCGTGGGAGCTAGCTA 57.419 61.111 19.38 0.00 43.29 3.32
3744 4089 0.677731 TTGGATGCTCTTCTTGCCGG 60.678 55.000 0.00 0.00 0.00 6.13
3789 4134 0.034670 ATGCCTCCTGCTTCTTGGTC 60.035 55.000 0.00 0.00 42.00 4.02
3820 4165 9.677567 CTTCTTGTTTAGCTAGCATTTGTTTTA 57.322 29.630 18.83 0.00 0.00 1.52
3822 4167 8.846211 TCTTGTTTAGCTAGCATTTGTTTTAGT 58.154 29.630 18.83 0.00 0.00 2.24
3840 4185 0.926628 GTTTTGCGTCCGGTTCGTTG 60.927 55.000 18.83 0.00 0.00 4.10
3846 4191 1.278637 GTCCGGTTCGTTGCTTGTG 59.721 57.895 0.00 0.00 0.00 3.33
3933 4279 2.126580 GTTGACGTCTCCGGACCG 60.127 66.667 17.92 15.34 39.15 4.79
3999 4346 9.896645 TCATGAATCTGACTAGCTTATTTCTTT 57.103 29.630 0.00 0.00 0.00 2.52
4002 4349 8.321353 TGAATCTGACTAGCTTATTTCTTTGGA 58.679 33.333 0.00 0.00 0.00 3.53
4014 4361 7.578380 GCTTATTTCTTTGGAGAATTCCTTGCT 60.578 37.037 0.65 0.00 44.36 3.91
4027 4417 7.049754 AGAATTCCTTGCTTGTTGAATTTTGT 58.950 30.769 0.65 0.00 37.51 2.83
4032 4422 6.652481 TCCTTGCTTGTTGAATTTTGTTTTCA 59.348 30.769 0.00 0.00 0.00 2.69
4042 4432 4.935885 ATTTTGTTTTCACGCTTGCAAA 57.064 31.818 0.00 0.00 0.00 3.68
4049 4439 6.244275 TGTTTTCACGCTTGCAAAAATAAAC 58.756 32.000 0.00 7.44 0.00 2.01
4054 4444 6.473521 TCACGCTTGCAAAAATAAACAAAAG 58.526 32.000 0.00 0.00 0.00 2.27
4152 4578 2.232452 TCTGCCCGAGAAGAAGAAGAAG 59.768 50.000 0.00 0.00 0.00 2.85
4155 4581 3.258228 GCCCGAGAAGAAGAAGAAGAAG 58.742 50.000 0.00 0.00 0.00 2.85
4157 4583 4.561734 GCCCGAGAAGAAGAAGAAGAAGAA 60.562 45.833 0.00 0.00 0.00 2.52
4159 4585 5.047660 CCCGAGAAGAAGAAGAAGAAGAAGA 60.048 44.000 0.00 0.00 0.00 2.87
4160 4586 6.451393 CCGAGAAGAAGAAGAAGAAGAAGAA 58.549 40.000 0.00 0.00 0.00 2.52
4161 4587 6.586082 CCGAGAAGAAGAAGAAGAAGAAGAAG 59.414 42.308 0.00 0.00 0.00 2.85
4162 4588 7.367285 CGAGAAGAAGAAGAAGAAGAAGAAGA 58.633 38.462 0.00 0.00 0.00 2.87
4163 4589 7.865385 CGAGAAGAAGAAGAAGAAGAAGAAGAA 59.135 37.037 0.00 0.00 0.00 2.52
4164 4590 9.196552 GAGAAGAAGAAGAAGAAGAAGAAGAAG 57.803 37.037 0.00 0.00 0.00 2.85
4165 4591 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4166 4592 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4167 4593 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4168 4594 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4169 4595 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4170 4596 9.898152 AAGAAGAAGAAGAAGAAGAAGAAGAAA 57.102 29.630 0.00 0.00 0.00 2.52
4171 4597 9.898152 AGAAGAAGAAGAAGAAGAAGAAGAAAA 57.102 29.630 0.00 0.00 0.00 2.29
4201 4628 7.341256 AGAGTATGACATGATTTCCTGCAAAAT 59.659 33.333 0.00 0.00 0.00 1.82
4235 4662 4.041762 GTCAATCCCACCCGGCCA 62.042 66.667 2.24 0.00 0.00 5.36
4260 4687 0.599060 GATCCTAGTAGCCTCGCCAC 59.401 60.000 0.00 0.00 0.00 5.01
4287 4714 2.759535 CAGACTGCTGGATCTCTCTGAA 59.240 50.000 0.00 0.00 38.51 3.02
4385 4812 4.029809 AGCCGGGCCAAGGTACAC 62.030 66.667 17.02 1.77 0.00 2.90
4388 4823 2.747686 CGGGCCAAGGTACACACT 59.252 61.111 4.39 0.00 0.00 3.55
4398 4837 4.037923 CCAAGGTACACACTTGCTGAATTT 59.962 41.667 5.17 0.00 42.98 1.82
4400 4839 6.238897 CCAAGGTACACACTTGCTGAATTTTA 60.239 38.462 5.17 0.00 42.98 1.52
4401 4840 6.560253 AGGTACACACTTGCTGAATTTTAG 57.440 37.500 0.00 0.00 0.00 1.85
4405 4844 7.750903 GGTACACACTTGCTGAATTTTAGAATC 59.249 37.037 0.00 0.00 0.00 2.52
4413 4852 7.572523 TGCTGAATTTTAGAATCCGATCATT 57.427 32.000 0.00 0.00 0.00 2.57
4440 4879 0.749649 ACCTTTGCACGCCATTTTCA 59.250 45.000 0.00 0.00 0.00 2.69
4447 4886 1.712401 CACGCCATTTTCATTGGTGG 58.288 50.000 8.03 0.00 46.73 4.61
4462 4901 0.250338 GGTGGTGACAGTCCTGGTTC 60.250 60.000 0.00 0.00 44.46 3.62
4463 4902 0.468226 GTGGTGACAGTCCTGGTTCA 59.532 55.000 0.00 0.00 44.46 3.18
4489 4928 2.030363 TGGGTTCGCAGCAAGTTTAATG 60.030 45.455 0.00 0.00 0.00 1.90
4629 5070 2.092699 CCCTTCCCTGTTCATTCTCTCC 60.093 54.545 0.00 0.00 0.00 3.71
4756 5199 7.403312 TTTTTCTTCTTCATTCCAGTCACAA 57.597 32.000 0.00 0.00 0.00 3.33
4759 5202 5.436175 TCTTCTTCATTCCAGTCACAAACA 58.564 37.500 0.00 0.00 0.00 2.83
4760 5203 6.064060 TCTTCTTCATTCCAGTCACAAACAT 58.936 36.000 0.00 0.00 0.00 2.71
4761 5204 6.547141 TCTTCTTCATTCCAGTCACAAACATT 59.453 34.615 0.00 0.00 0.00 2.71
4763 5206 6.738114 TCTTCATTCCAGTCACAAACATTTC 58.262 36.000 0.00 0.00 0.00 2.17
4764 5207 6.320926 TCTTCATTCCAGTCACAAACATTTCA 59.679 34.615 0.00 0.00 0.00 2.69
4765 5208 6.653526 TCATTCCAGTCACAAACATTTCAT 57.346 33.333 0.00 0.00 0.00 2.57
4766 5209 6.448852 TCATTCCAGTCACAAACATTTCATG 58.551 36.000 0.00 0.00 0.00 3.07
5002 5477 1.050204 TTGCTTGCCATCTTTTGCCT 58.950 45.000 0.00 0.00 0.00 4.75
5048 5524 0.886563 GCTGCTGGCATTGTTCTTCT 59.113 50.000 0.00 0.00 41.35 2.85
5050 5526 2.097142 GCTGCTGGCATTGTTCTTCTAG 59.903 50.000 0.00 0.00 41.35 2.43
5059 5535 6.986817 TGGCATTGTTCTTCTAGCTAGATTAC 59.013 38.462 23.81 19.77 31.40 1.89
5060 5536 7.147655 TGGCATTGTTCTTCTAGCTAGATTACT 60.148 37.037 23.81 5.56 31.40 2.24
5067 5543 8.626526 GTTCTTCTAGCTAGATTACTACTGCTT 58.373 37.037 23.81 0.00 33.92 3.91
5068 5544 8.754991 TCTTCTAGCTAGATTACTACTGCTTT 57.245 34.615 23.81 0.00 33.92 3.51
5070 5546 9.243637 CTTCTAGCTAGATTACTACTGCTTTTG 57.756 37.037 23.81 0.00 33.92 2.44
5072 5548 8.191446 TCTAGCTAGATTACTACTGCTTTTGTG 58.809 37.037 19.72 0.00 33.92 3.33
5073 5549 6.109359 AGCTAGATTACTACTGCTTTTGTGG 58.891 40.000 0.00 0.00 29.69 4.17
5074 5550 5.875359 GCTAGATTACTACTGCTTTTGTGGT 59.125 40.000 0.00 0.00 33.78 4.16
5075 5551 6.183360 GCTAGATTACTACTGCTTTTGTGGTG 60.183 42.308 0.00 0.00 31.74 4.17
5076 5552 5.621193 AGATTACTACTGCTTTTGTGGTGT 58.379 37.500 0.00 0.00 31.74 4.16
5077 5553 5.470098 AGATTACTACTGCTTTTGTGGTGTG 59.530 40.000 0.00 0.00 31.74 3.82
5078 5554 2.999331 ACTACTGCTTTTGTGGTGTGT 58.001 42.857 0.00 0.00 0.00 3.72
5079 5555 2.943033 ACTACTGCTTTTGTGGTGTGTC 59.057 45.455 0.00 0.00 0.00 3.67
5080 5556 1.102978 ACTGCTTTTGTGGTGTGTCC 58.897 50.000 0.00 0.00 0.00 4.02
5081 5557 1.340991 ACTGCTTTTGTGGTGTGTCCT 60.341 47.619 0.00 0.00 37.07 3.85
5082 5558 1.066002 CTGCTTTTGTGGTGTGTCCTG 59.934 52.381 0.00 0.00 37.07 3.86
5083 5559 1.340502 TGCTTTTGTGGTGTGTCCTGA 60.341 47.619 0.00 0.00 37.07 3.86
5084 5560 1.065551 GCTTTTGTGGTGTGTCCTGAC 59.934 52.381 0.00 0.00 37.07 3.51
5085 5561 1.676006 CTTTTGTGGTGTGTCCTGACC 59.324 52.381 0.00 0.00 37.07 4.02
5086 5562 0.621082 TTTGTGGTGTGTCCTGACCA 59.379 50.000 0.00 0.00 40.04 4.02
5147 5623 3.355378 CATGAGGCAGTACCCAAAATCA 58.645 45.455 0.00 0.00 40.58 2.57
5159 5635 0.395586 CAAAATCATCCTCGGCCCCA 60.396 55.000 0.00 0.00 0.00 4.96
5297 5773 1.611419 CACCCACCTGGATGATGCT 59.389 57.895 0.00 0.00 37.39 3.79
5305 5781 1.054231 CTGGATGATGCTAGGCAGGA 58.946 55.000 0.00 0.00 43.65 3.86
5310 5786 1.054231 TGATGCTAGGCAGGAGATGG 58.946 55.000 0.00 0.00 43.65 3.51
5368 5844 3.149899 CGCAGCAGAAGAATCCTGT 57.850 52.632 0.00 0.00 34.29 4.00
5456 5932 0.108233 CTCAGCTGACCAAGAGGAGC 60.108 60.000 13.74 0.00 38.69 4.70
5467 5946 0.038744 AAGAGGAGCAATGGTGGTGG 59.961 55.000 0.00 0.00 35.00 4.61
5468 5947 0.842030 AGAGGAGCAATGGTGGTGGA 60.842 55.000 0.00 0.00 35.00 4.02
5469 5948 0.393537 GAGGAGCAATGGTGGTGGAG 60.394 60.000 0.00 0.00 35.00 3.86
5470 5949 1.379044 GGAGCAATGGTGGTGGAGG 60.379 63.158 0.00 0.00 35.00 4.30
5471 5950 1.380302 GAGCAATGGTGGTGGAGGT 59.620 57.895 0.00 0.00 35.00 3.85
5472 5951 0.962356 GAGCAATGGTGGTGGAGGTG 60.962 60.000 0.00 0.00 35.00 4.00
5546 6025 2.225255 GCTGCAGAAGTTCAAGAAGGAC 59.775 50.000 20.43 0.00 0.00 3.85
5573 6052 4.223125 TGGCAGGCCAGCAAGGTT 62.223 61.111 22.80 0.00 41.89 3.50
5585 6064 1.856265 GCAAGGTTTGGGAGCAGTCG 61.856 60.000 0.00 0.00 0.00 4.18
5617 6096 0.464373 CTGGACAGCCGGCATAATGT 60.464 55.000 31.54 24.23 36.79 2.71
5654 6133 0.393944 ACAGGTGCTCGGAGATCGTA 60.394 55.000 9.69 0.00 40.32 3.43
5657 6136 1.359475 GTGCTCGGAGATCGTACCC 59.641 63.158 9.69 0.00 40.32 3.69
5673 6152 3.703804 CCCTACAGGTACCACCAGA 57.296 57.895 15.94 0.00 41.95 3.86
5698 6177 1.094073 CGCAAAGGGAGAGATGGCAG 61.094 60.000 0.00 0.00 0.00 4.85
5699 6178 0.750911 GCAAAGGGAGAGATGGCAGG 60.751 60.000 0.00 0.00 0.00 4.85
5700 6179 0.750911 CAAAGGGAGAGATGGCAGGC 60.751 60.000 0.00 0.00 0.00 4.85
5701 6180 1.210204 AAAGGGAGAGATGGCAGGCA 61.210 55.000 0.00 0.00 0.00 4.75
5702 6181 1.919600 AAGGGAGAGATGGCAGGCAC 61.920 60.000 0.00 0.00 0.00 5.01
5703 6182 2.202987 GGAGAGATGGCAGGCACG 60.203 66.667 0.00 0.00 0.00 5.34
5719 6216 2.648724 CGGCAATGACGCGCATTC 60.649 61.111 20.67 15.98 45.23 2.67
5726 6223 0.179137 ATGACGCGCATTCGAGAAGA 60.179 50.000 5.73 0.00 38.87 2.87
5729 6226 0.109272 ACGCGCATTCGAGAAGAAGA 60.109 50.000 5.73 0.00 42.92 2.87
5792 6298 3.726631 CTCTCTGACGAGCGCGGAC 62.727 68.421 15.86 8.54 43.17 4.79
6018 6524 2.676822 TCGAGCTCGAAGGGCACT 60.677 61.111 35.16 0.00 46.30 4.40
6206 6724 2.630098 GCAGAGCCAGATGGACTACATA 59.370 50.000 2.18 0.00 40.72 2.29
6218 6736 5.768678 ATGGACTACATATGCAGAGACGCA 61.769 45.833 10.02 0.00 38.26 5.24
6407 6925 0.320421 CGAGGAAGGGCGACAAGAAA 60.320 55.000 0.00 0.00 0.00 2.52
6484 7002 2.976185 TCAGACATGGGTGGTACAAGAA 59.024 45.455 0.00 0.00 44.16 2.52
6521 7039 2.783935 GTCGACTCCTCCGACGAC 59.216 66.667 8.70 0.00 45.23 4.34
6522 7040 2.812609 TCGACTCCTCCGACGACG 60.813 66.667 0.00 0.00 39.43 5.12
6580 7098 2.741211 GGTGTCCGGGAACTTCGC 60.741 66.667 0.00 0.00 0.00 4.70
6650 7168 1.078848 GCTGAAGCACGAGGGACAT 60.079 57.895 0.00 0.00 41.59 3.06
6715 7233 3.086733 CGAAAGGGAGGAAGGATGC 57.913 57.895 0.00 0.00 0.00 3.91
6911 7429 2.665603 GTCCTGCAGGTGAGGGAC 59.334 66.667 31.58 17.98 40.86 4.46
6954 7472 2.200792 ATTCAGAGTGAGTGCGATCG 57.799 50.000 11.69 11.69 0.00 3.69
7036 7554 2.517875 GCAGCCCGCCAGATGAAT 60.518 61.111 0.00 0.00 32.94 2.57
7068 7586 4.152964 GGTTACCCGAGCCCCGTC 62.153 72.222 0.00 0.00 36.31 4.79
7174 7697 4.582869 ACTGCTGCTCATGTCTGAATTTA 58.417 39.130 0.00 0.00 0.00 1.40
7180 7703 6.348786 GCTGCTCATGTCTGAATTTACTTCAA 60.349 38.462 0.00 0.00 43.20 2.69
7185 7708 9.390795 CTCATGTCTGAATTTACTTCAAAACAG 57.609 33.333 0.00 0.00 43.20 3.16
7206 7729 7.062749 ACAGTGTTCAGAGGTTATGTTTCTA 57.937 36.000 0.00 0.00 0.00 2.10
7300 7823 0.459237 CAGCAGTCCAGGACGATGAC 60.459 60.000 19.02 8.68 37.67 3.06
7363 7886 3.432588 AGAGCCGTCCTCGTCGTG 61.433 66.667 0.00 0.00 45.54 4.35
7455 7978 1.741770 GGGCGTTCGAGCAAGTCAT 60.742 57.895 0.00 0.00 39.27 3.06
7458 7981 0.368227 GCGTTCGAGCAAGTCATCTG 59.632 55.000 0.00 0.00 37.05 2.90
7612 8138 2.202492 CCACCGAGAAGAGCGTCG 60.202 66.667 0.00 0.00 35.91 5.12
7620 8146 3.909258 GAAGAGCGTCGGCGGACAA 62.909 63.158 22.40 0.00 46.35 3.18
7771 8297 3.398920 GACGACGTCGACGGGATA 58.601 61.111 41.52 0.00 44.95 2.59
7868 8398 1.410517 ACTGACTGACTGACTGTGTGG 59.589 52.381 0.00 0.00 0.00 4.17
7925 8456 5.046231 ACAGTACATTTTGGGGTGTGTTTTT 60.046 36.000 0.00 0.00 0.00 1.94
7930 8461 4.729227 TTTTGGGGTGTGTTTTTCTCTC 57.271 40.909 0.00 0.00 0.00 3.20
7945 8476 8.237267 TGTTTTTCTCTCTTCTTCTTGTGTTTC 58.763 33.333 0.00 0.00 0.00 2.78
7980 8511 1.002033 GCCGGATTTGTGATGAGATGC 60.002 52.381 5.05 0.00 0.00 3.91
8003 8534 2.030363 GGTGAGTGAGTGAGTGAGTGAG 60.030 54.545 0.00 0.00 0.00 3.51
8004 8535 2.621055 GTGAGTGAGTGAGTGAGTGAGT 59.379 50.000 0.00 0.00 0.00 3.41
8005 8536 2.620585 TGAGTGAGTGAGTGAGTGAGTG 59.379 50.000 0.00 0.00 0.00 3.51
8006 8537 1.959985 AGTGAGTGAGTGAGTGAGTGG 59.040 52.381 0.00 0.00 0.00 4.00
8129 8660 8.250143 TCTTATTCATGCCATTAGTAGACTGA 57.750 34.615 0.00 0.00 0.00 3.41
8131 8662 8.662781 TTATTCATGCCATTAGTAGACTGAAC 57.337 34.615 0.00 0.00 0.00 3.18
8132 8663 5.675684 TCATGCCATTAGTAGACTGAACA 57.324 39.130 0.00 0.00 0.00 3.18
8134 8665 5.422012 TCATGCCATTAGTAGACTGAACAGA 59.578 40.000 8.87 0.00 0.00 3.41
8135 8666 5.330455 TGCCATTAGTAGACTGAACAGAG 57.670 43.478 8.87 0.00 0.00 3.35
8136 8667 4.116238 GCCATTAGTAGACTGAACAGAGC 58.884 47.826 8.87 0.81 0.00 4.09
8139 8670 5.347342 CATTAGTAGACTGAACAGAGCAGG 58.653 45.833 8.87 0.00 37.69 4.85
8140 8671 2.883026 AGTAGACTGAACAGAGCAGGT 58.117 47.619 8.87 0.00 37.69 4.00
8141 8672 4.035612 AGTAGACTGAACAGAGCAGGTA 57.964 45.455 8.87 0.00 37.69 3.08
8142 8673 4.408276 AGTAGACTGAACAGAGCAGGTAA 58.592 43.478 8.87 0.00 37.69 2.85
8143 8674 3.669251 AGACTGAACAGAGCAGGTAAC 57.331 47.619 8.87 0.00 37.69 2.50
8144 8675 2.965831 AGACTGAACAGAGCAGGTAACA 59.034 45.455 8.87 0.00 37.69 2.41
8145 8676 3.060602 GACTGAACAGAGCAGGTAACAC 58.939 50.000 8.87 0.00 37.69 3.32
8146 8677 2.700897 ACTGAACAGAGCAGGTAACACT 59.299 45.455 8.87 0.00 37.69 3.55
8147 8678 3.062763 CTGAACAGAGCAGGTAACACTG 58.937 50.000 0.00 0.00 41.41 3.66
8148 8679 2.224281 TGAACAGAGCAGGTAACACTGG 60.224 50.000 0.00 0.00 38.90 4.00
8432 8982 0.039437 ACACCGACACACGTCAGATC 60.039 55.000 0.00 0.00 42.74 2.75
8443 8994 3.006967 ACACGTCAGATCTAGCAAAAGGT 59.993 43.478 0.00 0.00 0.00 3.50
8446 8997 3.791887 CGTCAGATCTAGCAAAAGGTACG 59.208 47.826 0.00 0.00 0.00 3.67
8448 8999 2.535984 CAGATCTAGCAAAAGGTACGCG 59.464 50.000 3.53 3.53 0.00 6.01
8458 9009 3.885521 GGTACGCGACCCCTCGAG 61.886 72.222 15.93 5.13 43.25 4.04
8463 9014 2.404995 CGCGACCCCTCGAGTAAGT 61.405 63.158 12.31 5.28 43.06 2.24
8465 9016 1.098050 GCGACCCCTCGAGTAAGTAA 58.902 55.000 12.31 0.00 43.06 2.24
8466 9017 1.065251 GCGACCCCTCGAGTAAGTAAG 59.935 57.143 12.31 4.84 43.06 2.34
8467 9018 1.065251 CGACCCCTCGAGTAAGTAAGC 59.935 57.143 12.31 0.00 43.06 3.09
8469 9020 2.494870 GACCCCTCGAGTAAGTAAGCAA 59.505 50.000 12.31 0.00 0.00 3.91
8470 9021 2.496470 ACCCCTCGAGTAAGTAAGCAAG 59.504 50.000 12.31 0.00 0.00 4.01
8471 9022 2.541556 CCCTCGAGTAAGTAAGCAAGC 58.458 52.381 12.31 0.00 0.00 4.01
8472 9023 2.166664 CCCTCGAGTAAGTAAGCAAGCT 59.833 50.000 12.31 0.00 0.00 3.74
8473 9024 3.380637 CCCTCGAGTAAGTAAGCAAGCTA 59.619 47.826 12.31 0.00 0.00 3.32
8474 9025 4.352887 CCTCGAGTAAGTAAGCAAGCTAC 58.647 47.826 12.31 0.00 0.00 3.58
8475 9026 4.096682 CCTCGAGTAAGTAAGCAAGCTACT 59.903 45.833 12.31 0.00 0.00 2.57
8476 9027 4.982999 TCGAGTAAGTAAGCAAGCTACTG 58.017 43.478 0.00 0.00 0.00 2.74
8477 9028 3.548268 CGAGTAAGTAAGCAAGCTACTGC 59.452 47.826 1.95 1.95 42.97 4.40
8496 9047 0.540454 CTGGCTGCAGAGAGATTGGA 59.460 55.000 20.43 0.00 0.00 3.53
8497 9048 0.540454 TGGCTGCAGAGAGATTGGAG 59.460 55.000 20.43 0.00 37.11 3.86
8498 9049 0.540923 GGCTGCAGAGAGATTGGAGT 59.459 55.000 20.43 0.00 36.50 3.85
8500 9051 1.206610 GCTGCAGAGAGATTGGAGTCA 59.793 52.381 20.43 0.00 36.50 3.41
8501 9052 2.891112 CTGCAGAGAGATTGGAGTCAC 58.109 52.381 8.42 0.00 30.38 3.67
8502 9053 1.203287 TGCAGAGAGATTGGAGTCACG 59.797 52.381 0.00 0.00 0.00 4.35
8503 9054 1.470632 GCAGAGAGATTGGAGTCACGG 60.471 57.143 0.00 0.00 0.00 4.94
8504 9055 1.821753 CAGAGAGATTGGAGTCACGGT 59.178 52.381 0.00 0.00 0.00 4.83
8505 9056 1.821753 AGAGAGATTGGAGTCACGGTG 59.178 52.381 0.56 0.56 0.00 4.94
8506 9057 0.898320 AGAGATTGGAGTCACGGTGG 59.102 55.000 8.50 0.00 0.00 4.61
8507 9058 0.108138 GAGATTGGAGTCACGGTGGG 60.108 60.000 8.50 0.00 0.00 4.61
8508 9059 0.836400 AGATTGGAGTCACGGTGGGT 60.836 55.000 8.50 0.00 0.00 4.51
8510 9061 2.748058 ATTGGAGTCACGGTGGGTGC 62.748 60.000 8.50 1.93 46.56 5.01
8511 9062 4.699522 GGAGTCACGGTGGGTGCC 62.700 72.222 8.50 1.72 46.56 5.01
8576 9127 4.760047 GTCGTCGCAGGGCATGGT 62.760 66.667 0.00 0.00 0.00 3.55
8577 9128 4.451150 TCGTCGCAGGGCATGGTC 62.451 66.667 0.00 0.00 0.00 4.02
8578 9129 4.758251 CGTCGCAGGGCATGGTCA 62.758 66.667 0.00 0.00 0.00 4.02
8579 9130 3.127533 GTCGCAGGGCATGGTCAC 61.128 66.667 0.00 0.00 0.00 3.67
8580 9131 4.758251 TCGCAGGGCATGGTCACG 62.758 66.667 0.00 0.00 0.00 4.35
8582 9133 4.722700 GCAGGGCATGGTCACGGT 62.723 66.667 0.00 0.00 0.00 4.83
8583 9134 2.436646 CAGGGCATGGTCACGGTC 60.437 66.667 0.00 0.00 0.00 4.79
8584 9135 2.927856 AGGGCATGGTCACGGTCA 60.928 61.111 0.00 0.00 0.00 4.02
8585 9136 2.746277 GGGCATGGTCACGGTCAC 60.746 66.667 0.00 0.00 0.00 3.67
8587 9138 3.118454 GCATGGTCACGGTCACGG 61.118 66.667 0.00 0.00 46.48 4.94
8588 9139 2.654289 CATGGTCACGGTCACGGA 59.346 61.111 0.00 0.00 46.48 4.69
8589 9140 1.005512 CATGGTCACGGTCACGGAA 60.006 57.895 0.00 0.00 46.48 4.30
8590 9141 1.014044 CATGGTCACGGTCACGGAAG 61.014 60.000 0.00 0.00 46.48 3.46
8591 9142 2.737376 GGTCACGGTCACGGAAGC 60.737 66.667 0.00 0.00 46.48 3.86
8592 9143 2.338984 GTCACGGTCACGGAAGCT 59.661 61.111 0.00 0.00 46.48 3.74
8593 9144 2.022129 GTCACGGTCACGGAAGCTG 61.022 63.158 0.00 0.00 46.48 4.24
8594 9145 2.029073 CACGGTCACGGAAGCTGT 59.971 61.111 0.00 0.00 46.48 4.40
8595 9146 1.594293 CACGGTCACGGAAGCTGTT 60.594 57.895 0.00 0.00 46.48 3.16
8596 9147 1.594293 ACGGTCACGGAAGCTGTTG 60.594 57.895 0.00 0.00 46.48 3.33
8597 9148 2.946762 GGTCACGGAAGCTGTTGC 59.053 61.111 0.00 0.00 40.05 4.17
8598 9149 2.617274 GGTCACGGAAGCTGTTGCC 61.617 63.158 0.00 0.00 40.80 4.52
8599 9150 1.598130 GTCACGGAAGCTGTTGCCT 60.598 57.895 0.00 0.00 40.80 4.75
8600 9151 1.597854 TCACGGAAGCTGTTGCCTG 60.598 57.895 0.00 0.00 40.80 4.85
8601 9152 2.281761 ACGGAAGCTGTTGCCTGG 60.282 61.111 0.00 0.00 40.80 4.45
8602 9153 3.741476 CGGAAGCTGTTGCCTGGC 61.741 66.667 12.87 12.87 40.80 4.85
8603 9154 3.741476 GGAAGCTGTTGCCTGGCG 61.741 66.667 14.98 0.00 40.80 5.69
8604 9155 4.410743 GAAGCTGTTGCCTGGCGC 62.411 66.667 14.98 11.19 40.80 6.53
8608 9159 3.297620 CTGTTGCCTGGCGCCTTT 61.298 61.111 29.70 0.00 36.24 3.11
8609 9160 3.273080 CTGTTGCCTGGCGCCTTTC 62.273 63.158 29.70 16.20 36.24 2.62
8610 9161 4.056125 GTTGCCTGGCGCCTTTCC 62.056 66.667 29.70 13.66 36.24 3.13
8611 9162 4.284550 TTGCCTGGCGCCTTTCCT 62.285 61.111 29.70 0.00 36.24 3.36
8612 9163 3.808218 TTGCCTGGCGCCTTTCCTT 62.808 57.895 29.70 0.00 36.24 3.36
8613 9164 3.443925 GCCTGGCGCCTTTCCTTC 61.444 66.667 29.70 5.83 0.00 3.46
8614 9165 2.751837 CCTGGCGCCTTTCCTTCC 60.752 66.667 29.70 0.00 0.00 3.46
8615 9166 2.751837 CTGGCGCCTTTCCTTCCC 60.752 66.667 29.70 0.00 0.00 3.97
8616 9167 4.715523 TGGCGCCTTTCCTTCCCG 62.716 66.667 29.70 0.00 0.00 5.14
8618 9169 4.404098 GCGCCTTTCCTTCCCGGA 62.404 66.667 0.73 0.00 41.06 5.14
8619 9170 2.125106 CGCCTTTCCTTCCCGGAG 60.125 66.667 0.73 0.00 44.28 4.63
8620 9171 2.656069 CGCCTTTCCTTCCCGGAGA 61.656 63.158 0.73 0.00 44.28 3.71
8621 9172 1.915983 GCCTTTCCTTCCCGGAGAT 59.084 57.895 0.73 0.00 44.28 2.75
8622 9173 0.256177 GCCTTTCCTTCCCGGAGATT 59.744 55.000 0.73 0.00 44.28 2.40
8623 9174 1.489230 GCCTTTCCTTCCCGGAGATTA 59.511 52.381 0.73 0.00 44.28 1.75
8624 9175 2.106684 GCCTTTCCTTCCCGGAGATTAT 59.893 50.000 0.73 0.00 44.28 1.28
8625 9176 3.807561 GCCTTTCCTTCCCGGAGATTATC 60.808 52.174 0.73 0.00 44.28 1.75
8626 9177 3.391296 CCTTTCCTTCCCGGAGATTATCA 59.609 47.826 0.73 0.00 44.28 2.15
8627 9178 4.503991 CCTTTCCTTCCCGGAGATTATCAG 60.504 50.000 0.73 0.00 44.28 2.90
8628 9179 3.330126 TCCTTCCCGGAGATTATCAGT 57.670 47.619 0.73 0.00 36.69 3.41
8629 9180 3.231818 TCCTTCCCGGAGATTATCAGTC 58.768 50.000 0.73 0.00 36.69 3.51
8630 9181 2.029828 CCTTCCCGGAGATTATCAGTCG 60.030 54.545 0.73 0.00 33.16 4.18
8631 9182 1.617322 TCCCGGAGATTATCAGTCGG 58.383 55.000 0.73 11.72 37.50 4.79
8632 9183 0.038159 CCCGGAGATTATCAGTCGGC 60.038 60.000 0.73 0.00 36.57 5.54
8633 9184 0.673985 CCGGAGATTATCAGTCGGCA 59.326 55.000 0.00 0.00 0.00 5.69
8634 9185 1.336332 CCGGAGATTATCAGTCGGCAG 60.336 57.143 0.00 0.00 0.00 4.85
8635 9186 1.336332 CGGAGATTATCAGTCGGCAGG 60.336 57.143 0.00 0.00 0.00 4.85
8636 9187 1.964223 GGAGATTATCAGTCGGCAGGA 59.036 52.381 0.00 0.00 0.00 3.86
8637 9188 2.029470 GGAGATTATCAGTCGGCAGGAG 60.029 54.545 0.00 0.00 0.00 3.69
8638 9189 1.342819 AGATTATCAGTCGGCAGGAGC 59.657 52.381 0.00 0.00 41.10 4.70
8663 9214 4.468615 GGCGCGCGTGGCAATTTA 62.469 61.111 37.03 0.00 43.84 1.40
8664 9215 2.944049 GCGCGCGTGGCAATTTAG 60.944 61.111 32.35 0.00 43.84 1.85
8665 9216 2.781957 CGCGCGTGGCAATTTAGA 59.218 55.556 24.19 0.00 43.84 2.10
8666 9217 1.296867 CGCGCGTGGCAATTTAGAG 60.297 57.895 24.19 0.00 43.84 2.43
8667 9218 1.583709 GCGCGTGGCAATTTAGAGC 60.584 57.895 8.43 0.00 42.87 4.09
8668 9219 1.982073 GCGCGTGGCAATTTAGAGCT 61.982 55.000 8.43 0.00 42.87 4.09
8669 9220 0.447801 CGCGTGGCAATTTAGAGCTT 59.552 50.000 0.00 0.00 0.00 3.74
8670 9221 1.791555 CGCGTGGCAATTTAGAGCTTG 60.792 52.381 0.00 0.00 0.00 4.01
8671 9222 1.900237 CGTGGCAATTTAGAGCTTGC 58.100 50.000 0.00 0.00 45.46 4.01
8675 9226 1.900237 GCAATTTAGAGCTTGCCACG 58.100 50.000 0.00 0.00 41.45 4.94
8676 9227 1.468520 GCAATTTAGAGCTTGCCACGA 59.531 47.619 0.00 0.00 41.45 4.35
8677 9228 2.476854 GCAATTTAGAGCTTGCCACGAG 60.477 50.000 0.00 0.00 41.45 4.18
8678 9229 1.373570 ATTTAGAGCTTGCCACGAGC 58.626 50.000 0.00 0.00 44.14 5.03
8687 9238 2.419198 GCCACGAGCGATGGAGAT 59.581 61.111 13.15 0.00 39.87 2.75
8688 9239 1.953138 GCCACGAGCGATGGAGATG 60.953 63.158 13.15 0.00 39.87 2.90
8689 9240 1.300465 CCACGAGCGATGGAGATGG 60.300 63.158 0.00 0.00 39.87 3.51
8690 9241 1.300465 CACGAGCGATGGAGATGGG 60.300 63.158 0.00 0.00 0.00 4.00
8691 9242 1.758514 ACGAGCGATGGAGATGGGT 60.759 57.895 0.00 0.00 0.00 4.51
8692 9243 1.300465 CGAGCGATGGAGATGGGTG 60.300 63.158 0.00 0.00 0.00 4.61
8693 9244 1.596477 GAGCGATGGAGATGGGTGC 60.596 63.158 0.00 0.00 0.00 5.01
8694 9245 2.190313 GCGATGGAGATGGGTGCA 59.810 61.111 0.00 0.00 0.00 4.57
8695 9246 1.228063 GCGATGGAGATGGGTGCAT 60.228 57.895 0.00 0.00 0.00 3.96
8696 9247 1.512996 GCGATGGAGATGGGTGCATG 61.513 60.000 0.00 0.00 0.00 4.06
8697 9248 0.887836 CGATGGAGATGGGTGCATGG 60.888 60.000 0.00 0.00 0.00 3.66
8698 9249 0.475475 GATGGAGATGGGTGCATGGA 59.525 55.000 0.00 0.00 0.00 3.41
8699 9250 0.184451 ATGGAGATGGGTGCATGGAC 59.816 55.000 9.16 9.16 0.00 4.02
8700 9251 1.524621 GGAGATGGGTGCATGGACG 60.525 63.158 11.52 0.00 0.00 4.79
8701 9252 2.124570 AGATGGGTGCATGGACGC 60.125 61.111 24.66 24.66 0.00 5.19
8702 9253 3.211963 GATGGGTGCATGGACGCC 61.212 66.667 27.42 20.92 39.62 5.68
8703 9254 3.993614 GATGGGTGCATGGACGCCA 62.994 63.158 27.42 25.02 42.27 5.69
8704 9255 4.720902 TGGGTGCATGGACGCCAG 62.721 66.667 27.42 0.00 42.27 4.85
8706 9257 4.722700 GGTGCATGGACGCCAGGT 62.723 66.667 11.52 0.00 37.65 4.00
8707 9258 3.434319 GTGCATGGACGCCAGGTG 61.434 66.667 0.10 0.00 37.65 4.00
8708 9259 4.720902 TGCATGGACGCCAGGTGG 62.721 66.667 4.64 0.00 37.65 4.61
8747 9298 4.436998 GCGCGCTCTAGGTGGTGT 62.437 66.667 26.67 0.00 0.00 4.16
8748 9299 2.202623 CGCGCTCTAGGTGGTGTC 60.203 66.667 5.56 0.00 0.00 3.67
8749 9300 2.202623 GCGCTCTAGGTGGTGTCG 60.203 66.667 0.00 0.00 0.00 4.35
8750 9301 2.202623 CGCTCTAGGTGGTGTCGC 60.203 66.667 0.00 0.00 0.00 5.19
8751 9302 2.184579 GCTCTAGGTGGTGTCGCC 59.815 66.667 0.00 0.00 43.69 5.54
8774 9325 3.390521 CCGGTGCCTGCTGTCCTA 61.391 66.667 0.00 0.00 0.00 2.94
8775 9326 2.125512 CGGTGCCTGCTGTCCTAC 60.126 66.667 0.00 0.00 0.00 3.18
8776 9327 2.650116 CGGTGCCTGCTGTCCTACT 61.650 63.158 0.00 0.00 0.00 2.57
8777 9328 1.320344 CGGTGCCTGCTGTCCTACTA 61.320 60.000 0.00 0.00 0.00 1.82
8778 9329 0.175989 GGTGCCTGCTGTCCTACTAC 59.824 60.000 0.00 0.00 0.00 2.73
8779 9330 0.179134 GTGCCTGCTGTCCTACTACG 60.179 60.000 0.00 0.00 0.00 3.51
8780 9331 1.227002 GCCTGCTGTCCTACTACGC 60.227 63.158 0.00 0.00 0.00 4.42
8781 9332 1.437986 CCTGCTGTCCTACTACGCC 59.562 63.158 0.00 0.00 0.00 5.68
8782 9333 1.064296 CTGCTGTCCTACTACGCCG 59.936 63.158 0.00 0.00 0.00 6.46
8783 9334 2.337749 CTGCTGTCCTACTACGCCGG 62.338 65.000 0.00 0.00 0.00 6.13
8784 9335 2.413142 GCTGTCCTACTACGCCGGT 61.413 63.158 1.90 0.00 0.00 5.28
8785 9336 1.432251 CTGTCCTACTACGCCGGTG 59.568 63.158 14.93 14.93 0.00 4.94
8786 9337 1.002257 TGTCCTACTACGCCGGTGA 60.002 57.895 24.59 4.37 0.00 4.02
8787 9338 1.308069 TGTCCTACTACGCCGGTGAC 61.308 60.000 24.59 7.98 0.00 3.67
8788 9339 1.002257 TCCTACTACGCCGGTGACA 60.002 57.895 24.59 8.00 0.00 3.58
8789 9340 1.028330 TCCTACTACGCCGGTGACAG 61.028 60.000 24.59 19.59 0.00 3.51
8790 9341 1.028330 CCTACTACGCCGGTGACAGA 61.028 60.000 24.59 3.05 0.00 3.41
8791 9342 0.098376 CTACTACGCCGGTGACAGAC 59.902 60.000 24.59 0.00 0.00 3.51
8792 9343 0.606130 TACTACGCCGGTGACAGACA 60.606 55.000 24.59 8.80 0.00 3.41
8793 9344 1.154016 CTACGCCGGTGACAGACAG 60.154 63.158 24.59 4.69 0.00 3.51
8794 9345 3.277211 TACGCCGGTGACAGACAGC 62.277 63.158 24.59 0.00 42.73 4.40
8795 9346 4.662961 CGCCGGTGACAGACAGCA 62.663 66.667 10.20 0.00 45.96 4.41
8796 9347 2.280797 GCCGGTGACAGACAGCAA 60.281 61.111 1.90 0.00 45.96 3.91
8797 9348 1.672356 GCCGGTGACAGACAGCAAT 60.672 57.895 1.90 0.00 45.96 3.56
8798 9349 1.639298 GCCGGTGACAGACAGCAATC 61.639 60.000 1.90 0.00 45.96 2.67
8799 9350 0.036952 CCGGTGACAGACAGCAATCT 60.037 55.000 0.00 0.00 45.96 2.40
8804 9355 3.494378 CAGACAGCAATCTGCCGG 58.506 61.111 0.00 0.00 46.52 6.13
8805 9356 2.437359 AGACAGCAATCTGCCGGC 60.437 61.111 22.73 22.73 46.52 6.13
8806 9357 2.747460 GACAGCAATCTGCCGGCA 60.747 61.111 30.59 30.59 46.52 5.69
8807 9358 3.044059 GACAGCAATCTGCCGGCAC 62.044 63.158 29.03 16.31 46.52 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 51 7.606456 GGTGACTAAGATTTACACAAGATCCAA 59.394 37.037 0.00 0.00 33.82 3.53
100 103 6.426633 TGATAAAATCGAACAGTTTCTGCAGA 59.573 34.615 13.74 13.74 34.37 4.26
116 120 9.774742 GAGACACCAGTTATGTTTGATAAAATC 57.225 33.333 0.00 0.00 0.00 2.17
167 171 2.053747 AACCACCATCCCAACCTAGA 57.946 50.000 0.00 0.00 0.00 2.43
200 211 6.003950 GGATTGCCTATTAAAGTGCCTGATA 58.996 40.000 0.00 0.00 0.00 2.15
428 442 4.658071 CACGGGTTTTACATGCATCTTAC 58.342 43.478 0.00 0.00 0.00 2.34
446 460 0.458669 AGACGGTAACCTATGCACGG 59.541 55.000 0.00 0.00 0.00 4.94
448 462 2.537401 GTCAGACGGTAACCTATGCAC 58.463 52.381 0.00 0.00 0.00 4.57
469 483 2.626743 CCATCAATCATCTCTTTGCCCC 59.373 50.000 0.00 0.00 0.00 5.80
499 514 6.207417 ACTCTTGAACAATTGTGAATGTAGGG 59.793 38.462 12.82 6.77 0.00 3.53
519 534 1.896465 GTAGTGGTCCAGCAGACTCTT 59.104 52.381 6.83 0.00 45.54 2.85
520 535 1.076350 AGTAGTGGTCCAGCAGACTCT 59.924 52.381 6.83 8.06 45.54 3.24
521 536 1.203523 CAGTAGTGGTCCAGCAGACTC 59.796 57.143 6.83 2.01 45.54 3.36
527 542 4.921834 GAGCAGTAGTGGTCCAGC 57.078 61.111 17.30 0.00 44.13 4.85
667 683 4.082125 CCCACCCCAATGAATAATAGCTC 58.918 47.826 0.00 0.00 0.00 4.09
683 703 2.231235 CACTTTAATTCTGTGCCCACCC 59.769 50.000 0.00 0.00 0.00 4.61
691 711 3.885297 AGCACAGCACACTTTAATTCTGT 59.115 39.130 0.00 0.00 35.42 3.41
693 713 4.136796 TCAGCACAGCACACTTTAATTCT 58.863 39.130 0.00 0.00 0.00 2.40
702 722 0.450583 CCATGATCAGCACAGCACAC 59.549 55.000 0.09 0.00 0.00 3.82
703 723 1.310216 GCCATGATCAGCACAGCACA 61.310 55.000 0.09 0.00 0.00 4.57
704 724 1.030488 AGCCATGATCAGCACAGCAC 61.030 55.000 9.38 0.00 31.89 4.40
705 725 0.323087 AAGCCATGATCAGCACAGCA 60.323 50.000 9.38 0.00 31.89 4.41
710 731 1.228228 GGGGAAGCCATGATCAGCA 59.772 57.895 9.38 0.00 0.00 4.41
883 905 3.304726 GCCAACAAGTGTAAAGGAGCTTC 60.305 47.826 0.00 0.00 0.00 3.86
960 982 4.752101 GCACTTACCTTTGCATATCTCGAT 59.248 41.667 0.00 0.00 38.68 3.59
963 985 5.355350 ACAAGCACTTACCTTTGCATATCTC 59.645 40.000 0.00 0.00 41.48 2.75
965 987 5.567138 ACAAGCACTTACCTTTGCATATC 57.433 39.130 0.00 0.00 41.48 1.63
1012 1034 0.179084 CATGTATCCGGTCCGCAACT 60.179 55.000 5.50 0.00 0.00 3.16
1034 1056 1.442526 GCTCCATCTTGCGTCCATGG 61.443 60.000 4.97 4.97 38.83 3.66
1044 1066 1.611673 CGGTTGTTCCAGCTCCATCTT 60.612 52.381 0.00 0.00 35.57 2.40
1059 1081 1.376037 GTGGAGCCCTCTTCGGTTG 60.376 63.158 0.00 0.00 0.00 3.77
1060 1082 2.943978 CGTGGAGCCCTCTTCGGTT 61.944 63.158 0.00 0.00 0.00 4.44
1086 1108 4.594136 GTTCGTTCAACCAACCTTTGTAG 58.406 43.478 0.00 0.00 0.00 2.74
1184 1211 6.128282 TGAGTTCGCAAGTTGAGGATTATTTC 60.128 38.462 7.16 0.00 39.48 2.17
1188 1215 4.265904 TGAGTTCGCAAGTTGAGGATTA 57.734 40.909 7.16 0.00 39.48 1.75
1289 1317 1.413077 CCGGGCCAAAAGTTAACCAAA 59.587 47.619 4.39 0.00 0.00 3.28
1367 1397 2.440196 AATACCACCCCCTCCCCACA 62.440 60.000 0.00 0.00 0.00 4.17
1368 1398 1.621514 AATACCACCCCCTCCCCAC 60.622 63.158 0.00 0.00 0.00 4.61
1369 1399 1.621205 CAATACCACCCCCTCCCCA 60.621 63.158 0.00 0.00 0.00 4.96
1537 1595 3.589288 GGCCATCATTCCTCCCTACTAAT 59.411 47.826 0.00 0.00 0.00 1.73
1672 1734 2.225091 ACCAAGCATCATTCCCTGTGAA 60.225 45.455 0.00 0.00 37.38 3.18
1673 1735 1.355381 ACCAAGCATCATTCCCTGTGA 59.645 47.619 0.00 0.00 0.00 3.58
1674 1736 1.843368 ACCAAGCATCATTCCCTGTG 58.157 50.000 0.00 0.00 0.00 3.66
1675 1737 2.564062 CAAACCAAGCATCATTCCCTGT 59.436 45.455 0.00 0.00 0.00 4.00
1765 1831 1.453155 GCCACCCACAATCTAGTGTG 58.547 55.000 6.52 6.52 46.98 3.82
1825 1902 5.290493 TGTTACATGTATCCATCTGACCC 57.710 43.478 6.36 0.00 0.00 4.46
1839 1916 8.822652 TCTCTGCTCAATATACATGTTACATG 57.177 34.615 22.12 22.12 0.00 3.21
1845 1922 8.982685 CGTTAATTCTCTGCTCAATATACATGT 58.017 33.333 2.69 2.69 0.00 3.21
1846 1923 9.196552 TCGTTAATTCTCTGCTCAATATACATG 57.803 33.333 0.00 0.00 0.00 3.21
1887 1968 6.515035 GCCTGCCCTGTATGTATTATTGTTTC 60.515 42.308 0.00 0.00 0.00 2.78
1888 1969 5.301805 GCCTGCCCTGTATGTATTATTGTTT 59.698 40.000 0.00 0.00 0.00 2.83
1889 1970 4.827284 GCCTGCCCTGTATGTATTATTGTT 59.173 41.667 0.00 0.00 0.00 2.83
1890 1971 4.141274 TGCCTGCCCTGTATGTATTATTGT 60.141 41.667 0.00 0.00 0.00 2.71
1949 2030 1.813862 CGGAATGGTCCATTATGGCGT 60.814 52.381 17.33 0.00 45.26 5.68
1951 2032 2.270352 TCGGAATGGTCCATTATGGC 57.730 50.000 17.33 4.86 45.26 4.40
1988 2069 6.201615 CGTGCTGTGAGTGATGATAATACAAT 59.798 38.462 0.00 0.00 0.00 2.71
1998 2079 1.494628 GTGCGTGCTGTGAGTGATG 59.505 57.895 0.00 0.00 0.00 3.07
2101 2214 6.032717 CGGCTTGTTTACTAGTTCTACTACC 58.967 44.000 0.00 0.00 0.00 3.18
2123 2241 2.061773 CAACAACTGTCTGCTCTACGG 58.938 52.381 0.00 0.00 0.00 4.02
2222 2356 4.803426 GTCGCCTCGCCTCACTGG 62.803 72.222 0.00 0.00 39.35 4.00
2231 2365 3.617538 GATTTCCGCGTCGCCTCG 61.618 66.667 12.44 0.00 0.00 4.63
2339 2521 4.473520 CCGGCAGGGGTACAGCAG 62.474 72.222 0.00 0.00 0.00 4.24
2381 2563 2.253758 CCGGCCGCATCGATTCATT 61.254 57.895 22.85 0.00 0.00 2.57
2383 2565 4.155733 ACCGGCCGCATCGATTCA 62.156 61.111 22.85 0.00 0.00 2.57
2384 2566 3.640000 CACCGGCCGCATCGATTC 61.640 66.667 22.85 0.00 0.00 2.52
2471 2653 1.365633 CCAGCAGGTCTATCGAGGC 59.634 63.158 0.00 0.00 0.00 4.70
2513 2695 4.935630 CGTACGCATCGCATCCTA 57.064 55.556 0.52 0.00 0.00 2.94
2543 2756 1.133325 TCTAGGCCACTCTCCATCCTC 60.133 57.143 5.01 0.00 0.00 3.71
2544 2757 0.937441 TCTAGGCCACTCTCCATCCT 59.063 55.000 5.01 0.00 0.00 3.24
2548 2762 2.237143 CAACAATCTAGGCCACTCTCCA 59.763 50.000 5.01 0.00 0.00 3.86
2586 2800 2.054363 CGCGATCTGCCTAACTACATG 58.946 52.381 0.00 0.00 42.08 3.21
2587 2801 1.681793 ACGCGATCTGCCTAACTACAT 59.318 47.619 15.93 0.00 42.08 2.29
2589 2803 1.202268 ACACGCGATCTGCCTAACTAC 60.202 52.381 15.93 0.00 42.08 2.73
2631 2889 7.634820 TGTGTCCACAGCTTACAAATGATTGT 61.635 38.462 0.00 0.00 43.38 2.71
2641 2899 0.249741 ACCGTGTGTCCACAGCTTAC 60.250 55.000 0.00 0.00 42.74 2.34
2668 2926 0.539986 AACACGCGGTAATCATCCCT 59.460 50.000 12.47 0.00 0.00 4.20
2671 2931 1.647346 TGGAACACGCGGTAATCATC 58.353 50.000 12.47 0.00 0.00 2.92
2672 2932 3.844911 TGGAACACGCGGTAATCAT 57.155 47.368 12.47 0.00 0.00 2.45
2712 2976 2.440980 GCCAAGGCCAGCTTAGGG 60.441 66.667 5.01 0.00 34.56 3.53
2734 2999 2.436646 CCCCAAGCCGTACAGCAG 60.437 66.667 3.48 0.00 34.23 4.24
2748 3017 1.749258 GAATCGTTCCTGGCACCCC 60.749 63.158 0.00 0.00 0.00 4.95
2756 3025 1.265454 AAGGCGGGAGAATCGTTCCT 61.265 55.000 0.00 0.00 34.37 3.36
2793 3062 9.654663 ATCTTTTGTTAATACTCCAGTACAGAC 57.345 33.333 0.00 0.00 32.72 3.51
2802 3071 8.753497 ATTCTCCCATCTTTTGTTAATACTCC 57.247 34.615 0.00 0.00 0.00 3.85
2804 3073 8.971073 CCAATTCTCCCATCTTTTGTTAATACT 58.029 33.333 0.00 0.00 0.00 2.12
2805 3074 8.749354 ACCAATTCTCCCATCTTTTGTTAATAC 58.251 33.333 0.00 0.00 0.00 1.89
2806 3075 8.893563 ACCAATTCTCCCATCTTTTGTTAATA 57.106 30.769 0.00 0.00 0.00 0.98
2807 3076 7.797121 ACCAATTCTCCCATCTTTTGTTAAT 57.203 32.000 0.00 0.00 0.00 1.40
2808 3077 8.893563 ATACCAATTCTCCCATCTTTTGTTAA 57.106 30.769 0.00 0.00 0.00 2.01
2809 3078 8.893563 AATACCAATTCTCCCATCTTTTGTTA 57.106 30.769 0.00 0.00 0.00 2.41
2810 3079 7.797121 AATACCAATTCTCCCATCTTTTGTT 57.203 32.000 0.00 0.00 0.00 2.83
2811 3080 8.116026 ACTAATACCAATTCTCCCATCTTTTGT 58.884 33.333 0.00 0.00 0.00 2.83
2812 3081 8.525290 ACTAATACCAATTCTCCCATCTTTTG 57.475 34.615 0.00 0.00 0.00 2.44
2870 3139 2.037641 CTGGCCATCATAGAATCGACCA 59.962 50.000 5.51 0.00 0.00 4.02
2872 3141 2.072298 GCTGGCCATCATAGAATCGAC 58.928 52.381 5.51 0.00 0.00 4.20
2880 3149 1.819208 GTGCGTGCTGGCCATCATA 60.819 57.895 13.31 0.00 0.00 2.15
2931 3200 2.282040 GTTCTGGTGCTGCTGCCT 60.282 61.111 13.47 0.00 38.71 4.75
2932 3201 3.730761 CGTTCTGGTGCTGCTGCC 61.731 66.667 13.47 4.00 38.71 4.85
2942 3211 2.179018 CATTTGGCGCCGTTCTGG 59.821 61.111 23.90 5.00 42.50 3.86
2945 3214 1.443702 GTTCCATTTGGCGCCGTTC 60.444 57.895 23.90 0.00 34.44 3.95
3025 3294 1.753368 GCTGGCTAGCTACCCAGGAG 61.753 65.000 28.63 11.53 46.87 3.69
3041 3310 1.001503 AGGACTCCCTCTCTGGCTG 59.998 63.158 0.00 0.00 38.86 4.85
3076 3350 9.206690 ACTATGTTATTGATTGAAGAGGAGAGA 57.793 33.333 0.00 0.00 0.00 3.10
3130 3404 9.929722 CGCTATTTTTAACAGTATATGCTGAAA 57.070 29.630 25.33 15.54 39.62 2.69
3154 3432 4.570874 GGAGATTCCCCCTGGCGC 62.571 72.222 0.00 0.00 0.00 6.53
3241 3553 4.500396 GGAAACGCCATTGCCATG 57.500 55.556 0.00 0.00 36.34 3.66
3272 3584 4.525912 TTTGGAACGGAAGGAGTACTAC 57.474 45.455 0.00 0.00 0.00 2.73
3273 3585 5.750352 AATTTGGAACGGAAGGAGTACTA 57.250 39.130 0.00 0.00 0.00 1.82
3274 3586 4.635699 AATTTGGAACGGAAGGAGTACT 57.364 40.909 0.00 0.00 0.00 2.73
3275 3587 5.485620 AGTAATTTGGAACGGAAGGAGTAC 58.514 41.667 0.00 0.00 0.00 2.73
3278 3590 4.760204 ACAAGTAATTTGGAACGGAAGGAG 59.240 41.667 0.00 0.00 41.25 3.69
3280 3592 5.704053 ACTACAAGTAATTTGGAACGGAAGG 59.296 40.000 0.00 0.00 41.25 3.46
3281 3593 6.796705 ACTACAAGTAATTTGGAACGGAAG 57.203 37.500 0.00 0.00 41.25 3.46
3282 3594 6.875195 CCTACTACAAGTAATTTGGAACGGAA 59.125 38.462 0.00 0.00 41.25 4.30
3284 3596 6.168389 ACCTACTACAAGTAATTTGGAACGG 58.832 40.000 0.00 0.00 41.25 4.44
3285 3597 8.937634 ATACCTACTACAAGTAATTTGGAACG 57.062 34.615 0.00 0.00 41.25 3.95
3330 3642 9.249457 CGCAGAAATGAATGTATCTAGAACTAA 57.751 33.333 0.00 0.00 0.00 2.24
3331 3643 8.630037 TCGCAGAAATGAATGTATCTAGAACTA 58.370 33.333 0.00 0.00 0.00 2.24
3332 3644 7.436673 GTCGCAGAAATGAATGTATCTAGAACT 59.563 37.037 0.00 0.00 39.69 3.01
3333 3645 7.559845 GTCGCAGAAATGAATGTATCTAGAAC 58.440 38.462 0.00 0.00 39.69 3.01
3334 3646 6.417930 CGTCGCAGAAATGAATGTATCTAGAA 59.582 38.462 0.00 0.00 39.69 2.10
3335 3647 5.915196 CGTCGCAGAAATGAATGTATCTAGA 59.085 40.000 0.00 0.00 39.69 2.43
3336 3648 5.915196 TCGTCGCAGAAATGAATGTATCTAG 59.085 40.000 0.00 0.00 39.69 2.43
3337 3649 5.827666 TCGTCGCAGAAATGAATGTATCTA 58.172 37.500 0.00 0.00 39.69 1.98
3338 3650 4.682787 TCGTCGCAGAAATGAATGTATCT 58.317 39.130 0.00 0.00 39.69 1.98
3339 3651 4.504461 ACTCGTCGCAGAAATGAATGTATC 59.496 41.667 0.00 0.00 39.69 2.24
3340 3652 4.433615 ACTCGTCGCAGAAATGAATGTAT 58.566 39.130 0.00 0.00 39.69 2.29
3341 3653 3.845178 ACTCGTCGCAGAAATGAATGTA 58.155 40.909 0.00 0.00 39.69 2.29
3342 3654 2.688507 ACTCGTCGCAGAAATGAATGT 58.311 42.857 0.00 0.00 39.69 2.71
3343 3655 4.840401 TTACTCGTCGCAGAAATGAATG 57.160 40.909 0.00 0.00 39.69 2.67
3344 3656 6.422776 AAATTACTCGTCGCAGAAATGAAT 57.577 33.333 0.00 0.00 39.69 2.57
3345 3657 5.856126 AAATTACTCGTCGCAGAAATGAA 57.144 34.783 0.00 0.00 39.69 2.57
3346 3658 6.327154 TCTAAATTACTCGTCGCAGAAATGA 58.673 36.000 0.00 0.00 39.69 2.57
3347 3659 6.569228 TCTAAATTACTCGTCGCAGAAATG 57.431 37.500 0.00 0.00 39.69 2.32
3348 3660 6.588756 TGTTCTAAATTACTCGTCGCAGAAAT 59.411 34.615 0.00 0.00 39.69 2.17
3349 3661 5.921976 TGTTCTAAATTACTCGTCGCAGAAA 59.078 36.000 0.00 0.00 39.69 2.52
3350 3662 5.463286 TGTTCTAAATTACTCGTCGCAGAA 58.537 37.500 0.00 0.00 39.69 3.02
3351 3663 5.050644 TGTTCTAAATTACTCGTCGCAGA 57.949 39.130 0.00 0.00 0.00 4.26
3352 3664 5.093457 TCTGTTCTAAATTACTCGTCGCAG 58.907 41.667 0.00 0.00 0.00 5.18
3353 3665 5.050644 TCTGTTCTAAATTACTCGTCGCA 57.949 39.130 0.00 0.00 0.00 5.10
3354 3666 4.499758 CCTCTGTTCTAAATTACTCGTCGC 59.500 45.833 0.00 0.00 0.00 5.19
3355 3667 5.035443 CCCTCTGTTCTAAATTACTCGTCG 58.965 45.833 0.00 0.00 0.00 5.12
3356 3668 6.127675 ACTCCCTCTGTTCTAAATTACTCGTC 60.128 42.308 0.00 0.00 0.00 4.20
3357 3669 5.715753 ACTCCCTCTGTTCTAAATTACTCGT 59.284 40.000 0.00 0.00 0.00 4.18
3358 3670 6.210287 ACTCCCTCTGTTCTAAATTACTCG 57.790 41.667 0.00 0.00 0.00 4.18
3359 3671 8.751242 ACTTACTCCCTCTGTTCTAAATTACTC 58.249 37.037 0.00 0.00 0.00 2.59
3360 3672 8.667592 ACTTACTCCCTCTGTTCTAAATTACT 57.332 34.615 0.00 0.00 0.00 2.24
3363 3675 9.102453 ACTAACTTACTCCCTCTGTTCTAAATT 57.898 33.333 0.00 0.00 0.00 1.82
3364 3676 8.667592 ACTAACTTACTCCCTCTGTTCTAAAT 57.332 34.615 0.00 0.00 0.00 1.40
3365 3677 9.592196 TTACTAACTTACTCCCTCTGTTCTAAA 57.408 33.333 0.00 0.00 0.00 1.85
3366 3678 9.765295 ATTACTAACTTACTCCCTCTGTTCTAA 57.235 33.333 0.00 0.00 0.00 2.10
3367 3679 9.765295 AATTACTAACTTACTCCCTCTGTTCTA 57.235 33.333 0.00 0.00 0.00 2.10
3368 3680 8.667592 AATTACTAACTTACTCCCTCTGTTCT 57.332 34.615 0.00 0.00 0.00 3.01
3369 3681 9.800433 GTAATTACTAACTTACTCCCTCTGTTC 57.200 37.037 8.41 0.00 0.00 3.18
3370 3682 9.317827 TGTAATTACTAACTTACTCCCTCTGTT 57.682 33.333 16.33 0.00 0.00 3.16
3371 3683 8.890410 TGTAATTACTAACTTACTCCCTCTGT 57.110 34.615 16.33 0.00 0.00 3.41
3372 3684 9.186837 TCTGTAATTACTAACTTACTCCCTCTG 57.813 37.037 16.33 0.00 0.00 3.35
3373 3685 9.765295 TTCTGTAATTACTAACTTACTCCCTCT 57.235 33.333 16.33 0.00 0.00 3.69
3375 3687 9.765295 TCTTCTGTAATTACTAACTTACTCCCT 57.235 33.333 16.33 0.00 0.00 4.20
3379 3691 9.544579 ACCCTCTTCTGTAATTACTAACTTACT 57.455 33.333 16.33 0.00 0.00 2.24
3380 3692 9.583765 CACCCTCTTCTGTAATTACTAACTTAC 57.416 37.037 16.33 0.00 0.00 2.34
3381 3693 8.755977 CCACCCTCTTCTGTAATTACTAACTTA 58.244 37.037 16.33 0.00 0.00 2.24
3382 3694 7.311109 CCCACCCTCTTCTGTAATTACTAACTT 60.311 40.741 16.33 0.00 0.00 2.66
3383 3695 6.156429 CCCACCCTCTTCTGTAATTACTAACT 59.844 42.308 16.33 0.00 0.00 2.24
3384 3696 6.155737 TCCCACCCTCTTCTGTAATTACTAAC 59.844 42.308 16.33 0.00 0.00 2.34
3385 3697 6.266080 TCCCACCCTCTTCTGTAATTACTAA 58.734 40.000 16.33 9.74 0.00 2.24
3386 3698 5.845734 TCCCACCCTCTTCTGTAATTACTA 58.154 41.667 16.33 2.49 0.00 1.82
3387 3699 4.695606 TCCCACCCTCTTCTGTAATTACT 58.304 43.478 16.33 0.00 0.00 2.24
3388 3700 5.431179 TTCCCACCCTCTTCTGTAATTAC 57.569 43.478 8.75 8.75 0.00 1.89
3389 3701 5.572885 GCTTTCCCACCCTCTTCTGTAATTA 60.573 44.000 0.00 0.00 0.00 1.40
3390 3702 4.811063 GCTTTCCCACCCTCTTCTGTAATT 60.811 45.833 0.00 0.00 0.00 1.40
3391 3703 3.308473 GCTTTCCCACCCTCTTCTGTAAT 60.308 47.826 0.00 0.00 0.00 1.89
3392 3704 2.039879 GCTTTCCCACCCTCTTCTGTAA 59.960 50.000 0.00 0.00 0.00 2.41
3393 3705 1.628846 GCTTTCCCACCCTCTTCTGTA 59.371 52.381 0.00 0.00 0.00 2.74
3394 3706 0.402121 GCTTTCCCACCCTCTTCTGT 59.598 55.000 0.00 0.00 0.00 3.41
3395 3707 0.695347 AGCTTTCCCACCCTCTTCTG 59.305 55.000 0.00 0.00 0.00 3.02
3396 3708 2.192263 CTAGCTTTCCCACCCTCTTCT 58.808 52.381 0.00 0.00 0.00 2.85
3397 3709 1.407575 GCTAGCTTTCCCACCCTCTTC 60.408 57.143 7.70 0.00 0.00 2.87
3398 3710 0.621082 GCTAGCTTTCCCACCCTCTT 59.379 55.000 7.70 0.00 0.00 2.85
3399 3711 1.617947 CGCTAGCTTTCCCACCCTCT 61.618 60.000 13.93 0.00 0.00 3.69
3400 3712 1.153349 CGCTAGCTTTCCCACCCTC 60.153 63.158 13.93 0.00 0.00 4.30
3419 3731 4.459089 GAAAGCCTCGGCCTCGCT 62.459 66.667 0.00 0.98 43.17 4.93
3440 3763 1.901464 GGAAAGCAACAGCCGGGAA 60.901 57.895 2.18 0.00 0.00 3.97
3583 3919 2.171840 CCACGGAGGAGAAGAGAAGAA 58.828 52.381 0.00 0.00 41.22 2.52
3610 3949 0.933796 GGTCAGCGAAGAATGCTAGC 59.066 55.000 8.10 8.10 41.72 3.42
3611 3950 1.576356 GGGTCAGCGAAGAATGCTAG 58.424 55.000 0.00 0.00 41.72 3.42
3612 3951 0.179111 CGGGTCAGCGAAGAATGCTA 60.179 55.000 0.00 0.00 41.72 3.49
3613 3952 1.448540 CGGGTCAGCGAAGAATGCT 60.449 57.895 0.00 0.00 45.31 3.79
3744 4089 0.989890 CGAGGAACGAACCGATGAAC 59.010 55.000 0.00 0.00 45.77 3.18
3789 4134 6.595772 ATGCTAGCTAAACAAGAAGAATCG 57.404 37.500 17.23 0.00 0.00 3.34
3820 4165 1.091197 AACGAACCGGACGCAAAACT 61.091 50.000 9.46 0.00 0.00 2.66
3822 4167 1.352404 CAACGAACCGGACGCAAAA 59.648 52.632 9.46 0.00 0.00 2.44
3840 4185 1.670967 GCATTTCCTCCAAGCACAAGC 60.671 52.381 0.00 0.00 42.56 4.01
3846 4191 1.153958 GCACGCATTTCCTCCAAGC 60.154 57.895 0.00 0.00 0.00 4.01
3999 4346 3.831323 TCAACAAGCAAGGAATTCTCCA 58.169 40.909 5.23 0.00 45.24 3.86
4002 4349 7.049754 ACAAAATTCAACAAGCAAGGAATTCT 58.950 30.769 5.23 0.00 38.60 2.40
4014 4361 6.302615 CAAGCGTGAAAACAAAATTCAACAA 58.697 32.000 0.00 0.00 38.44 2.83
4027 4417 6.408858 TGTTTATTTTTGCAAGCGTGAAAA 57.591 29.167 2.99 1.99 29.72 2.29
4032 4422 6.654793 TCTTTTGTTTATTTTTGCAAGCGT 57.345 29.167 0.00 0.00 0.00 5.07
4042 4432 8.922931 ATTGGCCAAAGATCTTTTGTTTATTT 57.077 26.923 24.71 0.00 0.00 1.40
4049 4439 4.320870 AGCAATTGGCCAAAGATCTTTTG 58.679 39.130 24.71 20.34 46.50 2.44
4054 4444 2.100418 GGAGAGCAATTGGCCAAAGATC 59.900 50.000 24.71 24.33 46.50 2.75
4135 4555 4.792521 TCTTCTTCTTCTTCTTCTCGGG 57.207 45.455 0.00 0.00 0.00 5.14
4159 4585 9.784531 TGTCATACTCTGAATTTTCTTCTTCTT 57.215 29.630 0.00 0.00 35.07 2.52
4160 4586 9.956640 ATGTCATACTCTGAATTTTCTTCTTCT 57.043 29.630 0.00 0.00 35.07 2.85
4161 4587 9.985318 CATGTCATACTCTGAATTTTCTTCTTC 57.015 33.333 0.00 0.00 35.07 2.87
4162 4588 9.730705 TCATGTCATACTCTGAATTTTCTTCTT 57.269 29.630 0.00 0.00 35.07 2.52
4163 4589 9.902684 ATCATGTCATACTCTGAATTTTCTTCT 57.097 29.630 0.00 0.00 35.07 2.85
4167 4593 9.727627 GGAAATCATGTCATACTCTGAATTTTC 57.272 33.333 0.00 0.00 35.07 2.29
4168 4594 9.471702 AGGAAATCATGTCATACTCTGAATTTT 57.528 29.630 0.00 0.00 35.07 1.82
4169 4595 8.900781 CAGGAAATCATGTCATACTCTGAATTT 58.099 33.333 0.00 0.00 35.07 1.82
4170 4596 7.013083 GCAGGAAATCATGTCATACTCTGAATT 59.987 37.037 0.00 0.00 35.07 2.17
4171 4597 6.485984 GCAGGAAATCATGTCATACTCTGAAT 59.514 38.462 0.00 0.00 35.07 2.57
4172 4598 5.819379 GCAGGAAATCATGTCATACTCTGAA 59.181 40.000 0.00 0.00 35.07 3.02
4201 4628 6.463897 GGGATTGACCTCGATATCCTGTAAAA 60.464 42.308 0.00 0.00 37.34 1.52
4213 4640 2.355986 CGGGTGGGATTGACCTCGA 61.356 63.158 0.00 0.00 38.98 4.04
4235 4662 2.355310 CGAGGCTACTAGGATCTCCGAT 60.355 54.545 0.00 0.00 42.08 4.18
4287 4714 2.867624 ACTGCATCATGGTCACAACTT 58.132 42.857 0.00 0.00 0.00 2.66
4385 4812 6.182039 TCGGATTCTAAAATTCAGCAAGTG 57.818 37.500 0.00 0.00 0.00 3.16
4388 4823 7.572523 ATGATCGGATTCTAAAATTCAGCAA 57.427 32.000 0.00 0.00 0.00 3.91
4398 4837 7.235606 AGGTATCTGGAAATGATCGGATTCTAA 59.764 37.037 0.00 0.00 0.00 2.10
4400 4839 5.545723 AGGTATCTGGAAATGATCGGATTCT 59.454 40.000 0.00 0.00 0.00 2.40
4401 4840 5.799213 AGGTATCTGGAAATGATCGGATTC 58.201 41.667 0.00 0.00 0.00 2.52
4405 4844 4.023707 GCAAAGGTATCTGGAAATGATCGG 60.024 45.833 0.00 0.00 0.00 4.18
4413 4852 1.448985 GCGTGCAAAGGTATCTGGAA 58.551 50.000 0.00 0.00 0.00 3.53
4440 4879 0.401738 CCAGGACTGTCACCACCAAT 59.598 55.000 10.38 0.00 0.00 3.16
4447 4886 2.839486 TCATGAACCAGGACTGTCAC 57.161 50.000 10.38 0.00 0.00 3.67
4462 4901 0.527113 TTGCTGCGAACCCAATCATG 59.473 50.000 0.00 0.00 0.00 3.07
4463 4902 0.813184 CTTGCTGCGAACCCAATCAT 59.187 50.000 0.00 0.00 0.00 2.45
4489 4928 2.052782 ATTAAGCCCAACCACGATCC 57.947 50.000 0.00 0.00 0.00 3.36
4629 5070 5.173664 TGCAGTGAATTAGTCTGACAGATG 58.826 41.667 8.73 0.54 0.00 2.90
4739 5182 6.320926 TGAAATGTTTGTGACTGGAATGAAGA 59.679 34.615 0.00 0.00 0.00 2.87
4740 5183 6.506147 TGAAATGTTTGTGACTGGAATGAAG 58.494 36.000 0.00 0.00 0.00 3.02
4759 5202 5.393866 ACCCACCTAACTGAAACATGAAAT 58.606 37.500 0.00 0.00 0.00 2.17
4760 5203 4.798882 ACCCACCTAACTGAAACATGAAA 58.201 39.130 0.00 0.00 0.00 2.69
4761 5204 4.447138 ACCCACCTAACTGAAACATGAA 57.553 40.909 0.00 0.00 0.00 2.57
4763 5206 5.160607 TCTACCCACCTAACTGAAACATG 57.839 43.478 0.00 0.00 0.00 3.21
4764 5207 5.726793 AGATCTACCCACCTAACTGAAACAT 59.273 40.000 0.00 0.00 0.00 2.71
4765 5208 5.091552 AGATCTACCCACCTAACTGAAACA 58.908 41.667 0.00 0.00 0.00 2.83
4766 5209 5.678955 AGATCTACCCACCTAACTGAAAC 57.321 43.478 0.00 0.00 0.00 2.78
5002 5477 5.162637 ACATATGGCCTCCTACTTATTGGA 58.837 41.667 3.32 0.00 0.00 3.53
5048 5524 7.093465 ACCACAAAAGCAGTAGTAATCTAGCTA 60.093 37.037 0.00 0.00 30.78 3.32
5050 5526 5.875359 ACCACAAAAGCAGTAGTAATCTAGC 59.125 40.000 0.00 0.00 0.00 3.42
5059 5535 2.290641 GGACACACCACAAAAGCAGTAG 59.709 50.000 0.00 0.00 38.79 2.57
5060 5536 2.092646 AGGACACACCACAAAAGCAGTA 60.093 45.455 0.00 0.00 42.04 2.74
5067 5543 0.621082 TGGTCAGGACACACCACAAA 59.379 50.000 1.41 0.00 37.78 2.83
5068 5544 0.621082 TTGGTCAGGACACACCACAA 59.379 50.000 1.41 0.00 42.61 3.33
5070 5546 1.308998 CTTTGGTCAGGACACACCAC 58.691 55.000 1.41 0.00 42.61 4.16
5072 5548 2.052782 AACTTTGGTCAGGACACACC 57.947 50.000 1.41 0.00 39.35 4.16
5073 5549 3.013921 TGAAACTTTGGTCAGGACACAC 58.986 45.455 1.41 0.00 0.00 3.82
5074 5550 3.358111 TGAAACTTTGGTCAGGACACA 57.642 42.857 1.41 0.00 0.00 3.72
5075 5551 3.632145 ACATGAAACTTTGGTCAGGACAC 59.368 43.478 0.00 0.00 30.35 3.67
5076 5552 3.897239 ACATGAAACTTTGGTCAGGACA 58.103 40.909 0.00 0.00 30.35 4.02
5077 5553 4.819630 TGTACATGAAACTTTGGTCAGGAC 59.180 41.667 0.00 0.00 30.35 3.85
5078 5554 5.042463 TGTACATGAAACTTTGGTCAGGA 57.958 39.130 0.00 0.00 30.35 3.86
5079 5555 5.299279 AGTTGTACATGAAACTTTGGTCAGG 59.701 40.000 0.00 0.00 32.75 3.86
5080 5556 6.260936 AGAGTTGTACATGAAACTTTGGTCAG 59.739 38.462 0.00 0.00 36.77 3.51
5081 5557 6.119536 AGAGTTGTACATGAAACTTTGGTCA 58.880 36.000 0.00 0.00 36.77 4.02
5082 5558 6.483640 AGAGAGTTGTACATGAAACTTTGGTC 59.516 38.462 0.00 3.36 36.77 4.02
5083 5559 6.260936 CAGAGAGTTGTACATGAAACTTTGGT 59.739 38.462 0.00 0.00 36.77 3.67
5084 5560 6.662616 CAGAGAGTTGTACATGAAACTTTGG 58.337 40.000 0.00 0.00 36.77 3.28
5085 5561 6.138761 GCAGAGAGTTGTACATGAAACTTTG 58.861 40.000 0.00 7.72 36.77 2.77
5086 5562 5.822519 TGCAGAGAGTTGTACATGAAACTTT 59.177 36.000 0.00 1.67 36.77 2.66
5147 5623 0.988145 TCTTGATTGGGGCCGAGGAT 60.988 55.000 0.00 0.00 0.00 3.24
5159 5635 4.165565 TCCTCATGGATCAGCTTCTTGATT 59.834 41.667 0.00 0.00 37.90 2.57
5198 5674 1.270358 ACTCTCTTGTGGCCTTCGTTC 60.270 52.381 3.32 0.00 0.00 3.95
5207 5683 1.673665 GCTGGGCACTCTCTTGTGG 60.674 63.158 0.00 0.00 38.31 4.17
5297 5773 1.101635 CGACGACCATCTCCTGCCTA 61.102 60.000 0.00 0.00 0.00 3.93
5305 5781 4.194720 GCCTCGCGACGACCATCT 62.195 66.667 3.71 0.00 0.00 2.90
5456 5932 0.895100 CACCACCTCCACCACCATTG 60.895 60.000 0.00 0.00 0.00 2.82
5467 5946 1.002134 CACCCATCACCACCACCTC 60.002 63.158 0.00 0.00 0.00 3.85
5468 5947 2.538141 CCACCCATCACCACCACCT 61.538 63.158 0.00 0.00 0.00 4.00
5469 5948 2.035626 CCACCCATCACCACCACC 59.964 66.667 0.00 0.00 0.00 4.61
5470 5949 1.002134 CTCCACCCATCACCACCAC 60.002 63.158 0.00 0.00 0.00 4.16
5471 5950 2.905996 GCTCCACCCATCACCACCA 61.906 63.158 0.00 0.00 0.00 4.17
5472 5951 2.044946 GCTCCACCCATCACCACC 60.045 66.667 0.00 0.00 0.00 4.61
5513 5992 1.988956 CTGCAGCTCCTCCTCCTGT 60.989 63.158 0.00 0.00 0.00 4.00
5573 6052 3.706373 GCCCTCGACTGCTCCCAA 61.706 66.667 0.00 0.00 0.00 4.12
5617 6096 4.394078 CGTCTTCGTCGTGGCCGA 62.394 66.667 0.00 0.00 41.73 5.54
5620 6099 2.050714 TGTCGTCTTCGTCGTGGC 60.051 61.111 0.00 0.00 38.33 5.01
5621 6100 1.442184 CCTGTCGTCTTCGTCGTGG 60.442 63.158 0.00 0.00 38.33 4.94
5622 6101 0.997226 CACCTGTCGTCTTCGTCGTG 60.997 60.000 0.00 0.00 38.33 4.35
5626 6105 1.286260 GAGCACCTGTCGTCTTCGT 59.714 57.895 0.00 0.00 38.33 3.85
5630 6109 2.282251 TCCGAGCACCTGTCGTCT 60.282 61.111 0.00 0.00 35.59 4.18
5632 6111 1.658686 GATCTCCGAGCACCTGTCGT 61.659 60.000 0.00 0.00 35.59 4.34
5636 6115 0.029567 GTACGATCTCCGAGCACCTG 59.970 60.000 0.00 0.00 41.76 4.00
5641 6120 0.873721 GTAGGGTACGATCTCCGAGC 59.126 60.000 0.00 0.00 41.76 5.03
5657 6136 2.816411 TCCTTCTGGTGGTACCTGTAG 58.184 52.381 14.36 8.36 39.58 2.74
5673 6152 1.573108 TCTCTCCCTTTGCGATCCTT 58.427 50.000 0.00 0.00 0.00 3.36
5700 6179 3.665825 AATGCGCGTCATTGCCGTG 62.666 57.895 22.04 0.00 43.40 4.94
5701 6180 3.381169 GAATGCGCGTCATTGCCGT 62.381 57.895 25.85 8.43 44.95 5.68
5702 6181 2.648724 GAATGCGCGTCATTGCCG 60.649 61.111 25.85 0.00 44.95 5.69
5703 6182 2.648724 CGAATGCGCGTCATTGCC 60.649 61.111 25.85 15.18 44.95 4.52
5707 6186 0.179137 TCTTCTCGAATGCGCGTCAT 60.179 50.000 8.43 9.21 37.46 3.06
5708 6187 0.388006 TTCTTCTCGAATGCGCGTCA 60.388 50.000 8.43 6.86 37.46 4.35
5719 6216 1.134848 CCTCCTTGCCTCTTCTTCTCG 60.135 57.143 0.00 0.00 0.00 4.04
5726 6223 3.721706 CCGCCCTCCTTGCCTCTT 61.722 66.667 0.00 0.00 0.00 2.85
6206 6724 1.023513 GCTTCCTTGCGTCTCTGCAT 61.024 55.000 0.00 0.00 45.78 3.96
6218 6736 1.594310 GTCGGAGAGCTGCTTCCTT 59.406 57.895 20.72 3.77 36.95 3.36
6407 6925 2.260639 TCTCCTCCTTGCTCCTGATT 57.739 50.000 0.00 0.00 0.00 2.57
6470 6988 0.682852 CGGAGTTCTTGTACCACCCA 59.317 55.000 0.00 0.00 0.00 4.51
6527 7045 1.227089 CATCAGGTTCCTCGGCGAG 60.227 63.158 29.16 29.16 0.00 5.03
6650 7168 2.440796 CCGCCGTAGTAGTCCCCA 60.441 66.667 0.00 0.00 0.00 4.96
6689 7207 2.352805 CTCCCTTTCGGCTGCCTT 59.647 61.111 17.92 0.00 0.00 4.35
6693 7211 1.078143 CCTTCCTCCCTTTCGGCTG 60.078 63.158 0.00 0.00 0.00 4.85
6694 7212 0.621862 ATCCTTCCTCCCTTTCGGCT 60.622 55.000 0.00 0.00 0.00 5.52
6715 7233 1.369091 CTTCCCCTTGATGCCGAACG 61.369 60.000 0.00 0.00 0.00 3.95
6954 7472 3.881688 CCTGAACATTCCCATGTCAGATC 59.118 47.826 8.40 0.00 43.34 2.75
7029 7547 2.981784 TCCCCGGATCATCAATTCATCT 59.018 45.455 0.73 0.00 0.00 2.90
7036 7554 1.766496 GTAACCTCCCCGGATCATCAA 59.234 52.381 0.73 0.00 36.31 2.57
7174 7697 4.589908 ACCTCTGAACACTGTTTTGAAGT 58.410 39.130 0.00 0.00 0.00 3.01
7180 7703 6.828785 AGAAACATAACCTCTGAACACTGTTT 59.171 34.615 0.00 0.00 38.04 2.83
7185 7708 6.643770 TCGTTAGAAACATAACCTCTGAACAC 59.356 38.462 0.00 0.00 32.99 3.32
7206 7729 4.196193 TGGTTCTGAGACAACATTTCGTT 58.804 39.130 0.00 0.00 38.83 3.85
7240 7763 1.065636 TCAGCTTGATCTTGCTCCAGG 60.066 52.381 9.48 1.20 37.44 4.45
7455 7978 2.276116 GGAGGTGGTGTCGAGCAGA 61.276 63.158 0.00 0.00 0.00 4.26
7552 8078 2.801162 CACAGTGTCGTCGAGCCG 60.801 66.667 0.00 0.00 0.00 5.52
7612 8138 4.400961 AGCAGCCTCTTGTCCGCC 62.401 66.667 0.00 0.00 0.00 6.13
7691 8217 2.753043 GAGCCCGTCCACCGAGTA 60.753 66.667 0.00 0.00 39.56 2.59
7771 8297 2.841988 GCCTCCATCTCCTCGGCT 60.842 66.667 0.00 0.00 37.76 5.52
7868 8398 1.265365 GCTCTGAACACCAAGCTCAAC 59.735 52.381 0.00 0.00 0.00 3.18
7925 8456 5.980116 CGAAGAAACACAAGAAGAAGAGAGA 59.020 40.000 0.00 0.00 0.00 3.10
7930 8461 4.811557 ACTCCGAAGAAACACAAGAAGAAG 59.188 41.667 0.00 0.00 0.00 2.85
7945 8476 1.207593 CGGCAAAAGCACTCCGAAG 59.792 57.895 0.00 0.00 44.23 3.79
7980 8511 1.959985 ACTCACTCACTCACTCACCAG 59.040 52.381 0.00 0.00 0.00 4.00
8003 8534 4.631813 CACAAGCTTAGTTACATCTCCCAC 59.368 45.833 0.00 0.00 0.00 4.61
8004 8535 4.286032 ACACAAGCTTAGTTACATCTCCCA 59.714 41.667 0.00 0.00 0.00 4.37
8005 8536 4.631813 CACACAAGCTTAGTTACATCTCCC 59.368 45.833 0.00 0.00 0.00 4.30
8006 8537 5.120830 CACACACAAGCTTAGTTACATCTCC 59.879 44.000 0.00 0.00 0.00 3.71
8119 8650 4.035612 ACCTGCTCTGTTCAGTCTACTA 57.964 45.455 0.00 0.00 0.00 1.82
8129 8660 1.768870 ACCAGTGTTACCTGCTCTGTT 59.231 47.619 0.00 0.00 0.00 3.16
8131 8662 1.609061 CCACCAGTGTTACCTGCTCTG 60.609 57.143 0.00 0.00 0.00 3.35
8132 8663 0.687354 CCACCAGTGTTACCTGCTCT 59.313 55.000 0.00 0.00 0.00 4.09
8134 8665 1.346722 GTACCACCAGTGTTACCTGCT 59.653 52.381 0.00 0.00 0.00 4.24
8135 8666 1.071071 TGTACCACCAGTGTTACCTGC 59.929 52.381 3.43 0.00 28.80 4.85
8136 8667 3.260884 AGATGTACCACCAGTGTTACCTG 59.739 47.826 3.43 0.00 28.80 4.00
8139 8670 4.530710 TCAGATGTACCACCAGTGTTAC 57.469 45.455 0.00 0.00 0.00 2.50
8140 8671 4.562757 GCTTCAGATGTACCACCAGTGTTA 60.563 45.833 0.00 0.00 0.00 2.41
8141 8672 3.807209 GCTTCAGATGTACCACCAGTGTT 60.807 47.826 0.00 0.00 0.00 3.32
8142 8673 2.289694 GCTTCAGATGTACCACCAGTGT 60.290 50.000 0.00 0.00 0.00 3.55
8143 8674 2.289631 TGCTTCAGATGTACCACCAGTG 60.290 50.000 0.00 0.00 0.00 3.66
8144 8675 1.977854 TGCTTCAGATGTACCACCAGT 59.022 47.619 0.00 0.00 0.00 4.00
8145 8676 2.744202 GTTGCTTCAGATGTACCACCAG 59.256 50.000 0.00 0.00 0.00 4.00
8146 8677 2.105649 TGTTGCTTCAGATGTACCACCA 59.894 45.455 0.00 0.00 0.00 4.17
8147 8678 2.744202 CTGTTGCTTCAGATGTACCACC 59.256 50.000 3.29 0.00 37.61 4.61
8148 8679 3.433615 GTCTGTTGCTTCAGATGTACCAC 59.566 47.826 12.79 0.00 44.59 4.16
8149 8680 3.070878 TGTCTGTTGCTTCAGATGTACCA 59.929 43.478 12.79 5.29 44.59 3.25
8150 8681 3.433615 GTGTCTGTTGCTTCAGATGTACC 59.566 47.826 12.79 3.26 44.59 3.34
8432 8982 0.997196 GGTCGCGTACCTTTTGCTAG 59.003 55.000 17.12 0.00 45.75 3.42
8443 8994 1.078497 TTACTCGAGGGGTCGCGTA 60.078 57.895 18.41 0.00 37.46 4.42
8446 8997 1.065251 CTTACTTACTCGAGGGGTCGC 59.935 57.143 18.41 0.00 0.00 5.19
8448 8999 2.097825 TGCTTACTTACTCGAGGGGTC 58.902 52.381 18.41 1.88 0.00 4.46
8451 9002 2.166664 AGCTTGCTTACTTACTCGAGGG 59.833 50.000 18.41 8.95 0.00 4.30
8452 9003 3.512033 AGCTTGCTTACTTACTCGAGG 57.488 47.619 18.41 1.00 0.00 4.63
8454 9005 4.674623 GCAGTAGCTTGCTTACTTACTCGA 60.675 45.833 3.04 0.00 40.89 4.04
8476 9027 1.096386 CCAATCTCTCTGCAGCCAGC 61.096 60.000 9.47 0.00 45.96 4.85
8477 9028 0.540454 TCCAATCTCTCTGCAGCCAG 59.460 55.000 9.47 7.14 40.54 4.85
8478 9029 0.540454 CTCCAATCTCTCTGCAGCCA 59.460 55.000 9.47 0.00 0.00 4.75
8481 9032 2.734809 CGTGACTCCAATCTCTCTGCAG 60.735 54.545 7.63 7.63 0.00 4.41
8482 9033 1.203287 CGTGACTCCAATCTCTCTGCA 59.797 52.381 0.00 0.00 0.00 4.41
8484 9035 1.821753 ACCGTGACTCCAATCTCTCTG 59.178 52.381 0.00 0.00 0.00 3.35
8489 9040 0.836400 ACCCACCGTGACTCCAATCT 60.836 55.000 0.00 0.00 0.00 2.40
8491 9042 1.374947 CACCCACCGTGACTCCAAT 59.625 57.895 0.00 0.00 46.20 3.16
8492 9043 2.825982 CACCCACCGTGACTCCAA 59.174 61.111 0.00 0.00 46.20 3.53
8504 9055 4.980702 CTTGCAGGCAGGCACCCA 62.981 66.667 3.20 0.00 44.86 4.51
8576 9127 2.023414 AACAGCTTCCGTGACCGTGA 62.023 55.000 0.00 0.00 0.00 4.35
8577 9128 1.594293 AACAGCTTCCGTGACCGTG 60.594 57.895 0.00 0.00 0.00 4.94
8578 9129 1.594293 CAACAGCTTCCGTGACCGT 60.594 57.895 0.00 0.00 0.00 4.83
8579 9130 2.954753 GCAACAGCTTCCGTGACCG 61.955 63.158 0.00 0.00 0.00 4.79
8580 9131 2.617274 GGCAACAGCTTCCGTGACC 61.617 63.158 0.00 0.00 0.00 4.02
8581 9132 1.598130 AGGCAACAGCTTCCGTGAC 60.598 57.895 0.00 0.00 41.41 3.67
8582 9133 1.597854 CAGGCAACAGCTTCCGTGA 60.598 57.895 0.00 0.00 41.41 4.35
8583 9134 2.620112 CCAGGCAACAGCTTCCGTG 61.620 63.158 0.00 0.00 41.41 4.94
8584 9135 2.281761 CCAGGCAACAGCTTCCGT 60.282 61.111 0.00 0.00 41.41 4.69
8585 9136 3.741476 GCCAGGCAACAGCTTCCG 61.741 66.667 6.55 0.00 41.41 4.30
8586 9137 3.741476 CGCCAGGCAACAGCTTCC 61.741 66.667 13.30 0.00 41.41 3.46
8587 9138 4.410743 GCGCCAGGCAACAGCTTC 62.411 66.667 13.30 0.00 42.87 3.86
8591 9142 3.273080 GAAAGGCGCCAGGCAACAG 62.273 63.158 31.54 0.00 46.16 3.16
8592 9143 3.294493 GAAAGGCGCCAGGCAACA 61.294 61.111 31.54 0.00 46.16 3.33
8593 9144 4.056125 GGAAAGGCGCCAGGCAAC 62.056 66.667 31.54 12.97 46.16 4.17
8594 9145 3.808218 AAGGAAAGGCGCCAGGCAA 62.808 57.895 31.54 0.00 46.16 4.52
8595 9146 4.284550 AAGGAAAGGCGCCAGGCA 62.285 61.111 31.54 0.00 46.16 4.75
8596 9147 3.443925 GAAGGAAAGGCGCCAGGC 61.444 66.667 31.54 16.59 44.19 4.85
8597 9148 2.751837 GGAAGGAAAGGCGCCAGG 60.752 66.667 31.54 0.00 0.00 4.45
8598 9149 2.751837 GGGAAGGAAAGGCGCCAG 60.752 66.667 31.54 0.00 0.00 4.85
8599 9150 4.715523 CGGGAAGGAAAGGCGCCA 62.716 66.667 31.54 0.00 0.00 5.69
8609 9160 2.029828 CGACTGATAATCTCCGGGAAGG 60.030 54.545 0.00 0.00 42.97 3.46
8610 9161 2.029828 CCGACTGATAATCTCCGGGAAG 60.030 54.545 0.00 0.00 33.94 3.46
8611 9162 1.961394 CCGACTGATAATCTCCGGGAA 59.039 52.381 0.00 0.00 33.94 3.97
8612 9163 1.617322 CCGACTGATAATCTCCGGGA 58.383 55.000 0.00 0.00 33.94 5.14
8613 9164 0.038159 GCCGACTGATAATCTCCGGG 60.038 60.000 0.00 0.00 37.62 5.73
8614 9165 0.673985 TGCCGACTGATAATCTCCGG 59.326 55.000 0.00 0.00 39.88 5.14
8615 9166 1.336332 CCTGCCGACTGATAATCTCCG 60.336 57.143 0.00 0.00 0.00 4.63
8616 9167 1.964223 TCCTGCCGACTGATAATCTCC 59.036 52.381 0.00 0.00 0.00 3.71
8617 9168 2.609244 GCTCCTGCCGACTGATAATCTC 60.609 54.545 0.00 0.00 0.00 2.75
8618 9169 1.342819 GCTCCTGCCGACTGATAATCT 59.657 52.381 0.00 0.00 0.00 2.40
8619 9170 1.789506 GCTCCTGCCGACTGATAATC 58.210 55.000 0.00 0.00 0.00 1.75
8620 9171 3.997672 GCTCCTGCCGACTGATAAT 57.002 52.632 0.00 0.00 0.00 1.28
8646 9197 4.468615 TAAATTGCCACGCGCGCC 62.469 61.111 32.58 19.10 42.08 6.53
8647 9198 2.944049 CTAAATTGCCACGCGCGC 60.944 61.111 32.58 23.91 42.08 6.86
8648 9199 1.296867 CTCTAAATTGCCACGCGCG 60.297 57.895 30.96 30.96 42.08 6.86
8649 9200 1.583709 GCTCTAAATTGCCACGCGC 60.584 57.895 5.73 0.00 38.31 6.86
8650 9201 0.447801 AAGCTCTAAATTGCCACGCG 59.552 50.000 3.53 3.53 0.00 6.01
8651 9202 1.900237 CAAGCTCTAAATTGCCACGC 58.100 50.000 0.00 0.00 0.00 5.34
8652 9203 1.900237 GCAAGCTCTAAATTGCCACG 58.100 50.000 0.00 0.00 44.76 4.94
8657 9208 2.476854 GCTCGTGGCAAGCTCTAAATTG 60.477 50.000 3.93 0.00 41.35 2.32
8658 9209 1.740025 GCTCGTGGCAAGCTCTAAATT 59.260 47.619 3.93 0.00 41.35 1.82
8659 9210 1.373570 GCTCGTGGCAAGCTCTAAAT 58.626 50.000 3.93 0.00 41.35 1.40
8660 9211 1.014044 CGCTCGTGGCAAGCTCTAAA 61.014 55.000 9.33 0.00 41.91 1.85
8661 9212 1.446099 CGCTCGTGGCAAGCTCTAA 60.446 57.895 9.33 0.00 41.91 2.10
8662 9213 1.667154 ATCGCTCGTGGCAAGCTCTA 61.667 55.000 9.33 0.00 41.91 2.43
8663 9214 3.011635 ATCGCTCGTGGCAAGCTCT 62.012 57.895 9.33 0.00 41.91 4.09
8664 9215 2.510238 ATCGCTCGTGGCAAGCTC 60.510 61.111 9.33 0.00 41.91 4.09
8665 9216 2.816958 CATCGCTCGTGGCAAGCT 60.817 61.111 9.33 0.00 41.91 3.74
8666 9217 3.869272 CCATCGCTCGTGGCAAGC 61.869 66.667 0.97 0.97 41.91 4.01
8667 9218 2.125552 TCCATCGCTCGTGGCAAG 60.126 61.111 0.00 0.00 41.91 4.01
8668 9219 1.960040 ATCTCCATCGCTCGTGGCAA 61.960 55.000 0.00 0.00 41.91 4.52
8669 9220 2.426406 ATCTCCATCGCTCGTGGCA 61.426 57.895 6.18 0.00 41.91 4.92
8670 9221 1.953138 CATCTCCATCGCTCGTGGC 60.953 63.158 6.18 0.00 36.66 5.01
8671 9222 1.300465 CCATCTCCATCGCTCGTGG 60.300 63.158 5.09 5.09 38.11 4.94
8672 9223 1.300465 CCCATCTCCATCGCTCGTG 60.300 63.158 0.00 0.00 0.00 4.35
8673 9224 1.758514 ACCCATCTCCATCGCTCGT 60.759 57.895 0.00 0.00 0.00 4.18
8674 9225 1.300465 CACCCATCTCCATCGCTCG 60.300 63.158 0.00 0.00 0.00 5.03
8675 9226 1.596477 GCACCCATCTCCATCGCTC 60.596 63.158 0.00 0.00 0.00 5.03
8676 9227 1.703014 ATGCACCCATCTCCATCGCT 61.703 55.000 0.00 0.00 0.00 4.93
8677 9228 1.228063 ATGCACCCATCTCCATCGC 60.228 57.895 0.00 0.00 0.00 4.58
8678 9229 0.887836 CCATGCACCCATCTCCATCG 60.888 60.000 0.00 0.00 0.00 3.84
8679 9230 0.475475 TCCATGCACCCATCTCCATC 59.525 55.000 0.00 0.00 0.00 3.51
8680 9231 0.184451 GTCCATGCACCCATCTCCAT 59.816 55.000 0.00 0.00 0.00 3.41
8681 9232 1.609239 GTCCATGCACCCATCTCCA 59.391 57.895 0.00 0.00 0.00 3.86
8682 9233 1.524621 CGTCCATGCACCCATCTCC 60.525 63.158 0.00 0.00 0.00 3.71
8683 9234 2.182842 GCGTCCATGCACCCATCTC 61.183 63.158 0.00 0.00 34.15 2.75
8684 9235 2.124570 GCGTCCATGCACCCATCT 60.125 61.111 0.00 0.00 34.15 2.90
8685 9236 3.211963 GGCGTCCATGCACCCATC 61.212 66.667 0.00 0.00 36.28 3.51
8686 9237 4.045781 TGGCGTCCATGCACCCAT 62.046 61.111 0.00 0.00 36.28 4.00
8687 9238 4.720902 CTGGCGTCCATGCACCCA 62.721 66.667 0.00 0.00 36.28 4.51
8689 9240 4.722700 ACCTGGCGTCCATGCACC 62.723 66.667 0.00 0.00 36.28 5.01
8690 9241 3.434319 CACCTGGCGTCCATGCAC 61.434 66.667 0.00 0.00 36.28 4.57
8691 9242 4.720902 CCACCTGGCGTCCATGCA 62.721 66.667 0.00 0.00 36.28 3.96
8730 9281 4.436998 ACACCACCTAGAGCGCGC 62.437 66.667 26.66 26.66 0.00 6.86
8731 9282 2.202623 GACACCACCTAGAGCGCG 60.203 66.667 0.00 0.00 0.00 6.86
8732 9283 2.202623 CGACACCACCTAGAGCGC 60.203 66.667 0.00 0.00 0.00 5.92
8733 9284 2.202623 GCGACACCACCTAGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
8734 9285 2.184579 GGCGACACCACCTAGAGC 59.815 66.667 0.00 0.00 38.86 4.09
8735 9286 2.490217 CGGCGACACCACCTAGAG 59.510 66.667 0.00 0.00 39.03 2.43
8736 9287 3.755628 GCGGCGACACCACCTAGA 61.756 66.667 12.98 0.00 39.03 2.43
8737 9288 3.371097 ATGCGGCGACACCACCTAG 62.371 63.158 12.98 0.00 39.03 3.02
8738 9289 3.387091 ATGCGGCGACACCACCTA 61.387 61.111 12.98 0.00 39.03 3.08
8757 9308 3.390521 TAGGACAGCAGGCACCGG 61.391 66.667 0.00 0.00 0.00 5.28
8758 9309 1.320344 TAGTAGGACAGCAGGCACCG 61.320 60.000 0.00 0.00 0.00 4.94
8759 9310 0.175989 GTAGTAGGACAGCAGGCACC 59.824 60.000 0.00 0.00 0.00 5.01
8760 9311 0.179134 CGTAGTAGGACAGCAGGCAC 60.179 60.000 0.00 0.00 0.00 5.01
8761 9312 1.945354 GCGTAGTAGGACAGCAGGCA 61.945 60.000 0.00 0.00 0.00 4.75
8762 9313 1.227002 GCGTAGTAGGACAGCAGGC 60.227 63.158 0.00 0.00 0.00 4.85
8763 9314 1.437986 GGCGTAGTAGGACAGCAGG 59.562 63.158 0.00 0.00 0.00 4.85
8764 9315 1.064296 CGGCGTAGTAGGACAGCAG 59.936 63.158 0.00 0.00 0.00 4.24
8765 9316 2.412323 CCGGCGTAGTAGGACAGCA 61.412 63.158 6.01 0.00 0.00 4.41
8766 9317 2.412112 CCGGCGTAGTAGGACAGC 59.588 66.667 6.01 0.00 0.00 4.40
8767 9318 1.028330 TCACCGGCGTAGTAGGACAG 61.028 60.000 6.01 0.00 0.00 3.51
8768 9319 1.002257 TCACCGGCGTAGTAGGACA 60.002 57.895 6.01 0.00 0.00 4.02
8769 9320 1.308069 TGTCACCGGCGTAGTAGGAC 61.308 60.000 6.01 3.21 0.00 3.85
8770 9321 1.002257 TGTCACCGGCGTAGTAGGA 60.002 57.895 6.01 0.00 0.00 2.94
8771 9322 1.028330 TCTGTCACCGGCGTAGTAGG 61.028 60.000 6.01 0.00 0.00 3.18
8772 9323 0.098376 GTCTGTCACCGGCGTAGTAG 59.902 60.000 6.01 0.00 0.00 2.57
8773 9324 0.606130 TGTCTGTCACCGGCGTAGTA 60.606 55.000 6.01 0.00 0.00 1.82
8774 9325 1.863662 CTGTCTGTCACCGGCGTAGT 61.864 60.000 6.01 0.00 0.00 2.73
8775 9326 1.154016 CTGTCTGTCACCGGCGTAG 60.154 63.158 6.01 0.00 0.00 3.51
8776 9327 2.959372 CTGTCTGTCACCGGCGTA 59.041 61.111 6.01 0.00 0.00 4.42
8777 9328 4.664677 GCTGTCTGTCACCGGCGT 62.665 66.667 6.01 0.00 0.00 5.68
8778 9329 4.662961 TGCTGTCTGTCACCGGCG 62.663 66.667 0.00 0.00 0.00 6.46
8779 9330 1.639298 GATTGCTGTCTGTCACCGGC 61.639 60.000 0.00 0.00 0.00 6.13
8780 9331 0.036952 AGATTGCTGTCTGTCACCGG 60.037 55.000 0.00 0.00 0.00 5.28
8781 9332 1.073964 CAGATTGCTGTCTGTCACCG 58.926 55.000 9.81 0.00 40.54 4.94
8782 9333 0.801251 GCAGATTGCTGTCTGTCACC 59.199 55.000 16.62 1.44 45.80 4.02
8785 9336 2.084844 CGGCAGATTGCTGTCTGTC 58.915 57.895 16.62 14.33 44.56 3.51
8786 9337 4.291047 CGGCAGATTGCTGTCTGT 57.709 55.556 16.62 0.00 44.56 3.41
8827 9378 4.651008 TTCGTCCCGACACGTGCC 62.651 66.667 17.22 2.74 40.79 5.01
8828 9379 3.103911 CTTCGTCCCGACACGTGC 61.104 66.667 17.22 7.72 40.79 5.34
8829 9380 1.008194 TTCTTCGTCCCGACACGTG 60.008 57.895 15.48 15.48 40.79 4.49
8830 9381 1.008079 GTTCTTCGTCCCGACACGT 60.008 57.895 6.08 0.00 40.79 4.49
8831 9382 1.002250 CTGTTCTTCGTCCCGACACG 61.002 60.000 0.10 0.10 41.36 4.49
8832 9383 0.031721 ACTGTTCTTCGTCCCGACAC 59.968 55.000 0.00 0.00 34.89 3.67
8833 9384 0.748450 AACTGTTCTTCGTCCCGACA 59.252 50.000 0.00 0.00 34.89 4.35
8834 9385 3.582743 AACTGTTCTTCGTCCCGAC 57.417 52.632 0.00 0.00 34.89 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.