Multiple sequence alignment - TraesCS5A01G497100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G497100 chr5A 100.000 2369 0 0 1 2369 664531368 664533736 0 4375
1 TraesCS5A01G497100 chr4D 91.326 1395 64 34 999 2367 484268498 484269861 0 1853
2 TraesCS5A01G497100 chr4B 91.176 1394 72 36 999 2367 615772877 615774244 0 1845
3 TraesCS5A01G497100 chr2D 89.172 628 62 5 1 623 627347957 627347331 0 778
4 TraesCS5A01G497100 chr4A 89.048 630 63 5 7 631 601289682 601289054 0 776
5 TraesCS5A01G497100 chr7B 89.013 628 63 5 1 623 63946083 63945457 0 773
6 TraesCS5A01G497100 chr7B 89.013 628 63 5 1 623 64079095 64078469 0 773
7 TraesCS5A01G497100 chr7B 88.854 628 64 5 1 623 117989115 117989741 0 767
8 TraesCS5A01G497100 chr3A 89.013 628 63 5 1 623 735367259 735366633 0 773
9 TraesCS5A01G497100 chr3A 88.854 628 64 5 1 623 743180200 743179574 0 767
10 TraesCS5A01G497100 chr2A 89.013 628 63 5 1 623 25120719 25121345 0 773
11 TraesCS5A01G497100 chr5B 88.854 628 64 5 1 623 36403114 36403740 0 767


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G497100 chr5A 664531368 664533736 2368 False 4375 4375 100.000 1 2369 1 chr5A.!!$F1 2368
1 TraesCS5A01G497100 chr4D 484268498 484269861 1363 False 1853 1853 91.326 999 2367 1 chr4D.!!$F1 1368
2 TraesCS5A01G497100 chr4B 615772877 615774244 1367 False 1845 1845 91.176 999 2367 1 chr4B.!!$F1 1368
3 TraesCS5A01G497100 chr2D 627347331 627347957 626 True 778 778 89.172 1 623 1 chr2D.!!$R1 622
4 TraesCS5A01G497100 chr4A 601289054 601289682 628 True 776 776 89.048 7 631 1 chr4A.!!$R1 624
5 TraesCS5A01G497100 chr7B 63945457 63946083 626 True 773 773 89.013 1 623 1 chr7B.!!$R1 622
6 TraesCS5A01G497100 chr7B 64078469 64079095 626 True 773 773 89.013 1 623 1 chr7B.!!$R2 622
7 TraesCS5A01G497100 chr7B 117989115 117989741 626 False 767 767 88.854 1 623 1 chr7B.!!$F1 622
8 TraesCS5A01G497100 chr3A 735366633 735367259 626 True 773 773 89.013 1 623 1 chr3A.!!$R1 622
9 TraesCS5A01G497100 chr3A 743179574 743180200 626 True 767 767 88.854 1 623 1 chr3A.!!$R2 622
10 TraesCS5A01G497100 chr2A 25120719 25121345 626 False 773 773 89.013 1 623 1 chr2A.!!$F1 622
11 TraesCS5A01G497100 chr5B 36403114 36403740 626 False 767 767 88.854 1 623 1 chr5B.!!$F1 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
741 746 0.031721 ACTGTTCTTCGTCCCGACAC 59.968 55.0 0.0 0.0 34.89 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2115 2148 0.368227 GCGTTCGAGCAAGTCATCTG 59.632 55.0 0.0 0.0 37.05 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.732896 ACTCGGTACTGAATTTATGAGGAT 57.267 37.500 5.76 0.00 0.00 3.24
68 69 2.237143 TCCACCCAGAGATAGCAGTTTG 59.763 50.000 0.00 0.00 0.00 2.93
80 81 2.944129 AGCAGTTTGCCTTTCCAACTA 58.056 42.857 0.00 0.00 46.52 2.24
83 84 3.304726 GCAGTTTGCCTTTCCAACTACTC 60.305 47.826 0.00 0.00 37.42 2.59
86 87 3.857157 TTGCCTTTCCAACTACTCAGT 57.143 42.857 0.00 0.00 36.19 3.41
93 94 6.513556 GCCTTTCCAACTACTCAGTCTTTTTC 60.514 42.308 0.00 0.00 32.29 2.29
94 95 6.017026 CCTTTCCAACTACTCAGTCTTTTTCC 60.017 42.308 0.00 0.00 32.29 3.13
98 99 5.639931 CCAACTACTCAGTCTTTTTCCTAGC 59.360 44.000 0.00 0.00 32.29 3.42
106 107 4.019771 CAGTCTTTTTCCTAGCCTCTCCTT 60.020 45.833 0.00 0.00 0.00 3.36
116 117 1.141053 AGCCTCTCCTTGACGTGTTTT 59.859 47.619 0.00 0.00 0.00 2.43
145 146 7.552459 TCAACATTTGTGAGTCTCCGATAATA 58.448 34.615 0.00 0.00 0.00 0.98
203 204 1.303236 CCCGCATCCAAACAGGTCA 60.303 57.895 0.00 0.00 39.02 4.02
204 205 0.893270 CCCGCATCCAAACAGGTCAA 60.893 55.000 0.00 0.00 39.02 3.18
211 212 4.615912 GCATCCAAACAGGTCAACATACAC 60.616 45.833 0.00 0.00 39.02 2.90
226 227 0.535335 TACACATGGGCCTCGTCTTC 59.465 55.000 4.53 0.00 0.00 2.87
303 305 4.974591 AGTTGCTCGAATGCTGATAAAAC 58.025 39.130 0.00 0.00 0.00 2.43
341 345 3.740631 TTCTCGAGGTCATGATCCATG 57.259 47.619 13.56 0.74 42.60 3.66
389 393 3.981516 AGGATAGAGAGACCACCATGA 57.018 47.619 0.00 0.00 0.00 3.07
390 394 3.843422 AGGATAGAGAGACCACCATGAG 58.157 50.000 0.00 0.00 0.00 2.90
391 395 3.206412 AGGATAGAGAGACCACCATGAGT 59.794 47.826 0.00 0.00 0.00 3.41
393 397 4.202202 GGATAGAGAGACCACCATGAGTTG 60.202 50.000 0.00 0.00 0.00 3.16
394 398 2.614259 AGAGAGACCACCATGAGTTGT 58.386 47.619 0.00 0.00 0.00 3.32
397 401 5.519808 AGAGAGACCACCATGAGTTGTATA 58.480 41.667 0.00 0.00 0.00 1.47
398 402 5.596361 AGAGAGACCACCATGAGTTGTATAG 59.404 44.000 0.00 0.00 0.00 1.31
427 432 2.502538 CCCATCAATTTGGCCATCAACT 59.497 45.455 6.09 0.00 35.29 3.16
450 455 1.019673 GCACGCTCAATCATGACCAT 58.980 50.000 0.00 0.00 0.00 3.55
497 502 1.339438 GCATGGGCGATACTGGATCAT 60.339 52.381 0.02 0.00 33.73 2.45
510 515 3.200483 CTGGATCATCTTGTCGCAATCA 58.800 45.455 0.00 0.00 0.00 2.57
519 524 3.745975 TCTTGTCGCAATCATTTCTTCGT 59.254 39.130 0.00 0.00 0.00 3.85
523 528 4.024472 TGTCGCAATCATTTCTTCGTTTGA 60.024 37.500 0.00 0.00 0.00 2.69
537 542 6.744112 TCTTCGTTTGAAAATAGTTGCCAAT 58.256 32.000 0.00 0.00 32.66 3.16
597 602 3.277715 TGAAACTATGGATCATTGCGCA 58.722 40.909 5.66 5.66 0.00 6.09
603 608 3.751479 ATGGATCATTGCGCACTACTA 57.249 42.857 11.12 0.00 0.00 1.82
604 609 2.821546 TGGATCATTGCGCACTACTAC 58.178 47.619 11.12 0.00 0.00 2.73
634 639 9.965824 GAAAATCCTTTCATTACAAGAGTTTCA 57.034 29.630 0.00 0.00 40.67 2.69
637 642 9.971922 AATCCTTTCATTACAAGAGTTTCAAAG 57.028 29.630 0.00 0.00 0.00 2.77
638 643 8.519799 TCCTTTCATTACAAGAGTTTCAAAGT 57.480 30.769 0.00 0.00 0.00 2.66
639 644 8.621286 TCCTTTCATTACAAGAGTTTCAAAGTC 58.379 33.333 0.00 0.00 0.00 3.01
640 645 8.405531 CCTTTCATTACAAGAGTTTCAAAGTCA 58.594 33.333 7.72 0.00 33.17 3.41
641 646 9.787532 CTTTCATTACAAGAGTTTCAAAGTCAA 57.212 29.630 7.72 0.00 33.17 3.18
654 659 8.951243 AGTTTCAAAGTCAATATTAGAAGAGGC 58.049 33.333 0.00 0.00 0.00 4.70
655 660 8.730680 GTTTCAAAGTCAATATTAGAAGAGGCA 58.269 33.333 0.00 0.00 0.00 4.75
656 661 8.862325 TTCAAAGTCAATATTAGAAGAGGCAA 57.138 30.769 0.00 0.00 0.00 4.52
657 662 8.862325 TCAAAGTCAATATTAGAAGAGGCAAA 57.138 30.769 0.00 0.00 0.00 3.68
658 663 9.295825 TCAAAGTCAATATTAGAAGAGGCAAAA 57.704 29.630 0.00 0.00 0.00 2.44
659 664 9.346725 CAAAGTCAATATTAGAAGAGGCAAAAC 57.653 33.333 0.00 0.00 0.00 2.43
660 665 7.308782 AGTCAATATTAGAAGAGGCAAAACG 57.691 36.000 0.00 0.00 0.00 3.60
661 666 7.103641 AGTCAATATTAGAAGAGGCAAAACGA 58.896 34.615 0.00 0.00 0.00 3.85
662 667 7.606456 AGTCAATATTAGAAGAGGCAAAACGAA 59.394 33.333 0.00 0.00 0.00 3.85
663 668 7.905493 GTCAATATTAGAAGAGGCAAAACGAAG 59.095 37.037 0.00 0.00 0.00 3.79
664 669 4.686839 ATTAGAAGAGGCAAAACGAAGC 57.313 40.909 0.00 0.00 0.00 3.86
697 702 4.059459 GTTCGTCGTGCCGCAGTG 62.059 66.667 0.00 0.00 0.00 3.66
709 714 2.432456 GCAGTGCGACGGACATGA 60.432 61.111 21.84 0.00 0.00 3.07
710 715 2.027073 GCAGTGCGACGGACATGAA 61.027 57.895 21.84 0.00 0.00 2.57
711 716 1.781555 CAGTGCGACGGACATGAAC 59.218 57.895 21.84 0.00 0.00 3.18
712 717 1.733041 AGTGCGACGGACATGAACG 60.733 57.895 21.84 5.94 0.00 3.95
714 719 3.109547 GCGACGGACATGAACGCA 61.110 61.111 0.00 0.00 46.75 5.24
715 720 2.452813 GCGACGGACATGAACGCAT 61.453 57.895 0.00 0.00 46.75 4.73
716 721 1.966493 GCGACGGACATGAACGCATT 61.966 55.000 0.00 0.00 46.75 3.56
717 722 0.247262 CGACGGACATGAACGCATTG 60.247 55.000 0.00 0.00 30.68 2.82
718 723 1.075542 GACGGACATGAACGCATTGA 58.924 50.000 0.00 0.00 30.68 2.57
719 724 0.796312 ACGGACATGAACGCATTGAC 59.204 50.000 0.00 0.00 30.68 3.18
720 725 0.247262 CGGACATGAACGCATTGACG 60.247 55.000 0.00 0.00 39.50 4.35
721 726 1.075542 GGACATGAACGCATTGACGA 58.924 50.000 0.00 0.00 36.70 4.20
722 727 1.463056 GGACATGAACGCATTGACGAA 59.537 47.619 0.00 0.00 36.70 3.85
723 728 2.495939 GACATGAACGCATTGACGAAC 58.504 47.619 0.00 2.73 36.70 3.95
724 729 2.143122 ACATGAACGCATTGACGAACT 58.857 42.857 0.00 0.00 36.70 3.01
725 730 2.096268 ACATGAACGCATTGACGAACTG 60.096 45.455 0.00 3.17 36.70 3.16
726 731 1.577468 TGAACGCATTGACGAACTGT 58.423 45.000 7.34 0.00 36.70 3.55
727 732 1.937223 TGAACGCATTGACGAACTGTT 59.063 42.857 0.00 0.00 36.70 3.16
728 733 2.033236 TGAACGCATTGACGAACTGTTC 60.033 45.455 10.48 10.48 35.88 3.18
729 734 1.865865 ACGCATTGACGAACTGTTCT 58.134 45.000 17.60 5.71 36.70 3.01
730 735 2.210116 ACGCATTGACGAACTGTTCTT 58.790 42.857 17.60 9.07 36.70 2.52
731 736 2.221055 ACGCATTGACGAACTGTTCTTC 59.779 45.455 17.27 17.27 36.70 2.87
732 737 2.718789 CGCATTGACGAACTGTTCTTCG 60.719 50.000 18.40 9.99 46.90 3.79
737 742 2.431539 CGAACTGTTCTTCGTCCCG 58.568 57.895 17.60 0.00 38.58 5.14
738 743 0.039798 CGAACTGTTCTTCGTCCCGA 60.040 55.000 17.60 0.00 38.58 5.14
739 744 1.416373 GAACTGTTCTTCGTCCCGAC 58.584 55.000 13.13 0.00 34.89 4.79
740 745 0.748450 AACTGTTCTTCGTCCCGACA 59.252 50.000 0.00 0.00 34.89 4.35
741 746 0.031721 ACTGTTCTTCGTCCCGACAC 59.968 55.000 0.00 0.00 34.89 3.67
742 747 1.002250 CTGTTCTTCGTCCCGACACG 61.002 60.000 0.10 0.10 41.36 4.49
743 748 1.008079 GTTCTTCGTCCCGACACGT 60.008 57.895 6.08 0.00 40.79 4.49
744 749 1.008194 TTCTTCGTCCCGACACGTG 60.008 57.895 15.48 15.48 40.79 4.49
745 750 3.103911 CTTCGTCCCGACACGTGC 61.104 66.667 17.22 7.72 40.79 5.34
746 751 4.651008 TTCGTCCCGACACGTGCC 62.651 66.667 17.22 2.74 40.79 5.01
787 792 4.291047 CGGCAGATTGCTGTCTGT 57.709 55.556 16.62 0.00 44.56 3.41
788 793 2.084844 CGGCAGATTGCTGTCTGTC 58.915 57.895 16.62 14.33 44.56 3.51
791 796 0.801251 GCAGATTGCTGTCTGTCACC 59.199 55.000 16.62 1.44 45.80 4.02
792 797 1.073964 CAGATTGCTGTCTGTCACCG 58.926 55.000 9.81 0.00 40.54 4.94
793 798 0.036952 AGATTGCTGTCTGTCACCGG 60.037 55.000 0.00 0.00 0.00 5.28
794 799 1.639298 GATTGCTGTCTGTCACCGGC 61.639 60.000 0.00 0.00 0.00 6.13
795 800 4.662961 TGCTGTCTGTCACCGGCG 62.663 66.667 0.00 0.00 0.00 6.46
796 801 4.664677 GCTGTCTGTCACCGGCGT 62.665 66.667 6.01 0.00 0.00 5.68
797 802 2.959372 CTGTCTGTCACCGGCGTA 59.041 61.111 6.01 0.00 0.00 4.42
798 803 1.154016 CTGTCTGTCACCGGCGTAG 60.154 63.158 6.01 0.00 0.00 3.51
799 804 1.863662 CTGTCTGTCACCGGCGTAGT 61.864 60.000 6.01 0.00 0.00 2.73
800 805 0.606130 TGTCTGTCACCGGCGTAGTA 60.606 55.000 6.01 0.00 0.00 1.82
801 806 0.098376 GTCTGTCACCGGCGTAGTAG 59.902 60.000 6.01 0.00 0.00 2.57
802 807 1.028330 TCTGTCACCGGCGTAGTAGG 61.028 60.000 6.01 0.00 0.00 3.18
803 808 1.002257 TGTCACCGGCGTAGTAGGA 60.002 57.895 6.01 0.00 0.00 2.94
804 809 1.308069 TGTCACCGGCGTAGTAGGAC 61.308 60.000 6.01 3.21 0.00 3.85
805 810 1.002257 TCACCGGCGTAGTAGGACA 60.002 57.895 6.01 0.00 0.00 4.02
806 811 1.028330 TCACCGGCGTAGTAGGACAG 61.028 60.000 6.01 0.00 0.00 3.51
807 812 2.412112 CCGGCGTAGTAGGACAGC 59.588 66.667 6.01 0.00 0.00 4.40
808 813 2.412323 CCGGCGTAGTAGGACAGCA 61.412 63.158 6.01 0.00 0.00 4.41
809 814 1.064296 CGGCGTAGTAGGACAGCAG 59.936 63.158 0.00 0.00 0.00 4.24
810 815 1.437986 GGCGTAGTAGGACAGCAGG 59.562 63.158 0.00 0.00 0.00 4.85
811 816 1.227002 GCGTAGTAGGACAGCAGGC 60.227 63.158 0.00 0.00 0.00 4.85
812 817 1.945354 GCGTAGTAGGACAGCAGGCA 61.945 60.000 0.00 0.00 0.00 4.75
813 818 0.179134 CGTAGTAGGACAGCAGGCAC 60.179 60.000 0.00 0.00 0.00 5.01
814 819 0.175989 GTAGTAGGACAGCAGGCACC 59.824 60.000 0.00 0.00 0.00 5.01
815 820 1.320344 TAGTAGGACAGCAGGCACCG 61.320 60.000 0.00 0.00 0.00 4.94
816 821 3.390521 TAGGACAGCAGGCACCGG 61.391 66.667 0.00 0.00 0.00 5.28
835 840 3.387091 ATGCGGCGACACCACCTA 61.387 61.111 12.98 0.00 39.03 3.08
836 841 3.371097 ATGCGGCGACACCACCTAG 62.371 63.158 12.98 0.00 39.03 3.02
837 842 3.755628 GCGGCGACACCACCTAGA 61.756 66.667 12.98 0.00 39.03 2.43
838 843 2.490217 CGGCGACACCACCTAGAG 59.510 66.667 0.00 0.00 39.03 2.43
839 844 2.184579 GGCGACACCACCTAGAGC 59.815 66.667 0.00 0.00 38.86 4.09
840 845 2.202623 GCGACACCACCTAGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
841 846 2.202623 CGACACCACCTAGAGCGC 60.203 66.667 0.00 0.00 0.00 5.92
842 847 2.202623 GACACCACCTAGAGCGCG 60.203 66.667 0.00 0.00 0.00 6.86
843 848 4.436998 ACACCACCTAGAGCGCGC 62.437 66.667 26.66 26.66 0.00 6.86
882 887 4.720902 CCACCTGGCGTCCATGCA 62.721 66.667 0.00 0.00 36.28 3.96
883 888 3.434319 CACCTGGCGTCCATGCAC 61.434 66.667 0.00 0.00 36.28 4.57
884 889 4.722700 ACCTGGCGTCCATGCACC 62.723 66.667 0.00 0.00 36.28 5.01
886 891 4.720902 CTGGCGTCCATGCACCCA 62.721 66.667 0.00 0.00 36.28 4.51
887 892 4.045781 TGGCGTCCATGCACCCAT 62.046 61.111 0.00 0.00 36.28 4.00
888 893 3.211963 GGCGTCCATGCACCCATC 61.212 66.667 0.00 0.00 36.28 3.51
889 894 2.124570 GCGTCCATGCACCCATCT 60.125 61.111 0.00 0.00 34.15 2.90
890 895 2.182842 GCGTCCATGCACCCATCTC 61.183 63.158 0.00 0.00 34.15 2.75
891 896 1.524621 CGTCCATGCACCCATCTCC 60.525 63.158 0.00 0.00 0.00 3.71
892 897 1.609239 GTCCATGCACCCATCTCCA 59.391 57.895 0.00 0.00 0.00 3.86
893 898 0.184451 GTCCATGCACCCATCTCCAT 59.816 55.000 0.00 0.00 0.00 3.41
894 899 0.475475 TCCATGCACCCATCTCCATC 59.525 55.000 0.00 0.00 0.00 3.51
895 900 0.887836 CCATGCACCCATCTCCATCG 60.888 60.000 0.00 0.00 0.00 3.84
896 901 1.228063 ATGCACCCATCTCCATCGC 60.228 57.895 0.00 0.00 0.00 4.58
897 902 1.703014 ATGCACCCATCTCCATCGCT 61.703 55.000 0.00 0.00 0.00 4.93
898 903 1.596477 GCACCCATCTCCATCGCTC 60.596 63.158 0.00 0.00 0.00 5.03
899 904 1.300465 CACCCATCTCCATCGCTCG 60.300 63.158 0.00 0.00 0.00 5.03
900 905 1.758514 ACCCATCTCCATCGCTCGT 60.759 57.895 0.00 0.00 0.00 4.18
901 906 1.300465 CCCATCTCCATCGCTCGTG 60.300 63.158 0.00 0.00 0.00 4.35
902 907 1.300465 CCATCTCCATCGCTCGTGG 60.300 63.158 5.09 5.09 38.11 4.94
903 908 1.953138 CATCTCCATCGCTCGTGGC 60.953 63.158 6.18 0.00 36.66 5.01
904 909 2.426406 ATCTCCATCGCTCGTGGCA 61.426 57.895 6.18 0.00 41.91 4.92
905 910 1.960040 ATCTCCATCGCTCGTGGCAA 61.960 55.000 0.00 0.00 41.91 4.52
906 911 2.125552 TCCATCGCTCGTGGCAAG 60.126 61.111 0.00 0.00 41.91 4.01
907 912 3.869272 CCATCGCTCGTGGCAAGC 61.869 66.667 0.97 0.97 41.91 4.01
908 913 2.816958 CATCGCTCGTGGCAAGCT 60.817 61.111 9.33 0.00 41.91 3.74
909 914 2.510238 ATCGCTCGTGGCAAGCTC 60.510 61.111 9.33 0.00 41.91 4.09
910 915 3.011635 ATCGCTCGTGGCAAGCTCT 62.012 57.895 9.33 0.00 41.91 4.09
911 916 1.667154 ATCGCTCGTGGCAAGCTCTA 61.667 55.000 9.33 0.00 41.91 2.43
912 917 1.446099 CGCTCGTGGCAAGCTCTAA 60.446 57.895 9.33 0.00 41.91 2.10
913 918 1.014044 CGCTCGTGGCAAGCTCTAAA 61.014 55.000 9.33 0.00 41.91 1.85
914 919 1.373570 GCTCGTGGCAAGCTCTAAAT 58.626 50.000 3.93 0.00 41.35 1.40
915 920 1.740025 GCTCGTGGCAAGCTCTAAATT 59.260 47.619 3.93 0.00 41.35 1.82
916 921 2.476854 GCTCGTGGCAAGCTCTAAATTG 60.477 50.000 3.93 0.00 41.35 2.32
921 926 1.900237 GCAAGCTCTAAATTGCCACG 58.100 50.000 0.00 0.00 44.76 4.94
922 927 1.900237 CAAGCTCTAAATTGCCACGC 58.100 50.000 0.00 0.00 0.00 5.34
923 928 0.447801 AAGCTCTAAATTGCCACGCG 59.552 50.000 3.53 3.53 0.00 6.01
924 929 1.583709 GCTCTAAATTGCCACGCGC 60.584 57.895 5.73 0.00 38.31 6.86
925 930 1.296867 CTCTAAATTGCCACGCGCG 60.297 57.895 30.96 30.96 42.08 6.86
926 931 2.944049 CTAAATTGCCACGCGCGC 60.944 61.111 32.58 23.91 42.08 6.86
927 932 4.468615 TAAATTGCCACGCGCGCC 62.469 61.111 32.58 19.10 42.08 6.53
953 958 3.997672 GCTCCTGCCGACTGATAAT 57.002 52.632 0.00 0.00 0.00 1.28
954 959 1.789506 GCTCCTGCCGACTGATAATC 58.210 55.000 0.00 0.00 0.00 1.75
955 960 1.342819 GCTCCTGCCGACTGATAATCT 59.657 52.381 0.00 0.00 0.00 2.40
956 961 2.609244 GCTCCTGCCGACTGATAATCTC 60.609 54.545 0.00 0.00 0.00 2.75
957 962 1.964223 TCCTGCCGACTGATAATCTCC 59.036 52.381 0.00 0.00 0.00 3.71
958 963 1.336332 CCTGCCGACTGATAATCTCCG 60.336 57.143 0.00 0.00 0.00 4.63
959 964 0.673985 TGCCGACTGATAATCTCCGG 59.326 55.000 0.00 0.00 39.88 5.14
960 965 0.038159 GCCGACTGATAATCTCCGGG 60.038 60.000 0.00 0.00 37.62 5.73
961 966 1.617322 CCGACTGATAATCTCCGGGA 58.383 55.000 0.00 0.00 33.94 5.14
962 967 1.961394 CCGACTGATAATCTCCGGGAA 59.039 52.381 0.00 0.00 33.94 3.97
963 968 2.029828 CCGACTGATAATCTCCGGGAAG 60.030 54.545 0.00 0.00 33.94 3.46
964 969 2.029828 CGACTGATAATCTCCGGGAAGG 60.030 54.545 0.00 0.00 42.97 3.46
974 979 4.715523 CGGGAAGGAAAGGCGCCA 62.716 66.667 31.54 0.00 0.00 5.69
975 980 2.751837 GGGAAGGAAAGGCGCCAG 60.752 66.667 31.54 0.00 0.00 4.85
976 981 2.751837 GGAAGGAAAGGCGCCAGG 60.752 66.667 31.54 0.00 0.00 4.45
977 982 3.443925 GAAGGAAAGGCGCCAGGC 61.444 66.667 31.54 16.59 44.19 4.85
978 983 4.284550 AAGGAAAGGCGCCAGGCA 62.285 61.111 31.54 0.00 46.16 4.75
979 984 3.808218 AAGGAAAGGCGCCAGGCAA 62.808 57.895 31.54 0.00 46.16 4.52
980 985 4.056125 GGAAAGGCGCCAGGCAAC 62.056 66.667 31.54 12.97 46.16 4.17
981 986 3.294493 GAAAGGCGCCAGGCAACA 61.294 61.111 31.54 0.00 46.16 3.33
982 987 3.273080 GAAAGGCGCCAGGCAACAG 62.273 63.158 31.54 0.00 46.16 3.16
986 991 4.410743 GCGCCAGGCAACAGCTTC 62.411 66.667 13.30 0.00 42.87 3.86
987 992 3.741476 CGCCAGGCAACAGCTTCC 61.741 66.667 13.30 0.00 41.41 3.46
988 993 3.741476 GCCAGGCAACAGCTTCCG 61.741 66.667 6.55 0.00 41.41 4.30
989 994 2.281761 CCAGGCAACAGCTTCCGT 60.282 61.111 0.00 0.00 41.41 4.69
990 995 2.620112 CCAGGCAACAGCTTCCGTG 61.620 63.158 0.00 0.00 41.41 4.94
991 996 1.597854 CAGGCAACAGCTTCCGTGA 60.598 57.895 0.00 0.00 41.41 4.35
992 997 1.598130 AGGCAACAGCTTCCGTGAC 60.598 57.895 0.00 0.00 41.41 3.67
993 998 2.617274 GGCAACAGCTTCCGTGACC 61.617 63.158 0.00 0.00 0.00 4.02
994 999 2.954753 GCAACAGCTTCCGTGACCG 61.955 63.158 0.00 0.00 0.00 4.79
995 1000 1.594293 CAACAGCTTCCGTGACCGT 60.594 57.895 0.00 0.00 0.00 4.83
996 1001 1.594293 AACAGCTTCCGTGACCGTG 60.594 57.895 0.00 0.00 0.00 4.94
997 1002 2.023414 AACAGCTTCCGTGACCGTGA 62.023 55.000 0.00 0.00 0.00 4.35
1069 1074 4.980702 CTTGCAGGCAGGCACCCA 62.981 66.667 3.20 0.00 44.86 4.51
1080 1085 3.936203 GCACCCACCGTGACTCCA 61.936 66.667 0.00 0.00 46.20 3.86
1081 1086 2.825982 CACCCACCGTGACTCCAA 59.174 61.111 0.00 0.00 46.20 3.53
1082 1087 1.374947 CACCCACCGTGACTCCAAT 59.625 57.895 0.00 0.00 46.20 3.16
1084 1089 0.836400 ACCCACCGTGACTCCAATCT 60.836 55.000 0.00 0.00 0.00 2.40
1086 1091 0.898320 CCACCGTGACTCCAATCTCT 59.102 55.000 0.00 0.00 0.00 3.10
1087 1092 1.134965 CCACCGTGACTCCAATCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
1089 1094 1.821753 ACCGTGACTCCAATCTCTCTG 59.178 52.381 0.00 0.00 0.00 3.35
1091 1096 1.203287 CGTGACTCCAATCTCTCTGCA 59.797 52.381 0.00 0.00 0.00 4.41
1092 1097 2.734809 CGTGACTCCAATCTCTCTGCAG 60.735 54.545 7.63 7.63 0.00 4.41
1093 1098 1.206610 TGACTCCAATCTCTCTGCAGC 59.793 52.381 9.47 0.00 0.00 5.25
1095 1100 0.540454 CTCCAATCTCTCTGCAGCCA 59.460 55.000 9.47 0.00 0.00 4.75
1096 1101 0.540454 TCCAATCTCTCTGCAGCCAG 59.460 55.000 9.47 7.14 40.54 4.85
1097 1102 1.096386 CCAATCTCTCTGCAGCCAGC 61.096 60.000 9.47 0.00 45.96 4.85
1119 1124 4.674623 GCAGTAGCTTGCTTACTTACTCGA 60.675 45.833 3.04 0.00 40.89 4.04
1121 1126 3.512033 AGCTTGCTTACTTACTCGAGG 57.488 47.619 18.41 1.00 0.00 4.63
1122 1127 2.166664 AGCTTGCTTACTTACTCGAGGG 59.833 50.000 18.41 8.95 0.00 4.30
1125 1130 2.097825 TGCTTACTTACTCGAGGGGTC 58.902 52.381 18.41 1.88 0.00 4.46
1127 1132 1.065251 CTTACTTACTCGAGGGGTCGC 59.935 57.143 18.41 0.00 0.00 5.19
1130 1135 1.078497 TTACTCGAGGGGTCGCGTA 60.078 57.895 18.41 0.00 37.46 4.42
1141 1147 0.997196 GGTCGCGTACCTTTTGCTAG 59.003 55.000 17.12 0.00 45.75 3.42
1155 1161 2.921634 TGCTAGATCTGACGTGTGTC 57.078 50.000 5.18 0.00 45.71 3.67
1384 1407 1.141657 CCTGATCAACCCATCCATCGT 59.858 52.381 0.00 0.00 0.00 3.73
1423 1448 3.433615 GTGTCTGTTGCTTCAGATGTACC 59.566 47.826 12.79 3.26 44.59 3.34
1424 1449 3.070878 TGTCTGTTGCTTCAGATGTACCA 59.929 43.478 12.79 5.29 44.59 3.25
1425 1450 3.433615 GTCTGTTGCTTCAGATGTACCAC 59.566 47.826 12.79 0.00 44.59 4.16
1426 1451 2.744202 CTGTTGCTTCAGATGTACCACC 59.256 50.000 3.29 0.00 37.61 4.61
1427 1452 2.105649 TGTTGCTTCAGATGTACCACCA 59.894 45.455 0.00 0.00 0.00 4.17
1428 1453 2.744202 GTTGCTTCAGATGTACCACCAG 59.256 50.000 0.00 0.00 0.00 4.00
1429 1454 1.977854 TGCTTCAGATGTACCACCAGT 59.022 47.619 0.00 0.00 0.00 4.00
1430 1455 2.289631 TGCTTCAGATGTACCACCAGTG 60.290 50.000 0.00 0.00 0.00 3.66
1432 1457 3.807209 GCTTCAGATGTACCACCAGTGTT 60.807 47.826 0.00 0.00 0.00 3.32
1433 1458 4.562757 GCTTCAGATGTACCACCAGTGTTA 60.563 45.833 0.00 0.00 0.00 2.41
1434 1459 4.530710 TCAGATGTACCACCAGTGTTAC 57.469 45.455 0.00 0.00 0.00 2.50
1435 1460 3.259876 TCAGATGTACCACCAGTGTTACC 59.740 47.826 3.43 0.00 28.80 2.85
1437 1462 3.260884 AGATGTACCACCAGTGTTACCTG 59.739 47.826 3.43 0.00 28.80 4.00
1438 1463 1.071071 TGTACCACCAGTGTTACCTGC 59.929 52.381 3.43 0.00 28.80 4.85
1439 1464 1.346722 GTACCACCAGTGTTACCTGCT 59.653 52.381 0.00 0.00 0.00 4.24
1440 1465 0.396811 ACCACCAGTGTTACCTGCTC 59.603 55.000 0.00 0.00 0.00 4.26
1441 1466 0.687354 CCACCAGTGTTACCTGCTCT 59.313 55.000 0.00 0.00 0.00 4.09
1442 1467 1.609061 CCACCAGTGTTACCTGCTCTG 60.609 57.143 0.00 0.00 0.00 3.35
1443 1468 1.070758 CACCAGTGTTACCTGCTCTGT 59.929 52.381 0.00 0.00 0.00 3.41
1444 1469 1.768870 ACCAGTGTTACCTGCTCTGTT 59.231 47.619 0.00 0.00 0.00 3.16
1454 1479 4.035612 ACCTGCTCTGTTCAGTCTACTA 57.964 45.455 0.00 0.00 0.00 1.82
1567 1592 5.120830 CACACACAAGCTTAGTTACATCTCC 59.879 44.000 0.00 0.00 0.00 3.71
1568 1593 4.631813 CACACAAGCTTAGTTACATCTCCC 59.368 45.833 0.00 0.00 0.00 4.30
1569 1594 4.286032 ACACAAGCTTAGTTACATCTCCCA 59.714 41.667 0.00 0.00 0.00 4.37
1570 1595 4.631813 CACAAGCTTAGTTACATCTCCCAC 59.368 45.833 0.00 0.00 0.00 4.61
1593 1618 1.959985 ACTCACTCACTCACTCACCAG 59.040 52.381 0.00 0.00 0.00 4.00
1628 1653 1.207593 CGGCAAAAGCACTCCGAAG 59.792 57.895 0.00 0.00 44.23 3.79
1643 1668 4.811557 ACTCCGAAGAAACACAAGAAGAAG 59.188 41.667 0.00 0.00 0.00 2.85
1648 1673 5.980116 CGAAGAAACACAAGAAGAAGAGAGA 59.020 40.000 0.00 0.00 0.00 3.10
1705 1731 1.265365 GCTCTGAACACCAAGCTCAAC 59.735 52.381 0.00 0.00 0.00 3.18
1802 1832 2.841988 GCCTCCATCTCCTCGGCT 60.842 66.667 0.00 0.00 37.76 5.52
1882 1912 2.753043 GAGCCCGTCCACCGAGTA 60.753 66.667 0.00 0.00 39.56 2.59
1961 1991 4.400961 AGCAGCCTCTTGTCCGCC 62.401 66.667 0.00 0.00 0.00 6.13
2021 2051 2.801162 CACAGTGTCGTCGAGCCG 60.801 66.667 0.00 0.00 0.00 5.52
2118 2151 2.276116 GGAGGTGGTGTCGAGCAGA 61.276 63.158 0.00 0.00 0.00 4.26
2333 2366 1.065636 TCAGCTTGATCTTGCTCCAGG 60.066 52.381 9.48 1.20 37.44 4.45
2367 2400 4.196193 TGGTTCTGAGACAACATTTCGTT 58.804 39.130 0.00 0.00 38.83 3.85
2368 2401 5.361427 TGGTTCTGAGACAACATTTCGTTA 58.639 37.500 0.00 0.00 35.52 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 6.202954 GGTTGATCCTCATAAATTCAGTACCG 59.797 42.308 0.00 0.00 0.00 4.02
21 22 7.283329 AGGTTGATCCTCATAAATTCAGTACC 58.717 38.462 0.00 0.00 44.42 3.34
40 41 2.044793 ATCTCTGGGTGGAAGGTTGA 57.955 50.000 0.00 0.00 0.00 3.18
47 48 2.237143 CAAACTGCTATCTCTGGGTGGA 59.763 50.000 0.00 0.00 0.00 4.02
68 69 3.686916 AGACTGAGTAGTTGGAAAGGC 57.313 47.619 0.00 0.00 37.25 4.35
80 81 4.164204 AGAGGCTAGGAAAAAGACTGAGT 58.836 43.478 0.00 0.00 30.38 3.41
83 84 3.517500 AGGAGAGGCTAGGAAAAAGACTG 59.482 47.826 0.00 0.00 30.38 3.51
86 87 4.020128 GTCAAGGAGAGGCTAGGAAAAAGA 60.020 45.833 0.00 0.00 0.00 2.52
93 94 0.457851 CACGTCAAGGAGAGGCTAGG 59.542 60.000 0.00 0.00 35.56 3.02
94 95 1.178276 ACACGTCAAGGAGAGGCTAG 58.822 55.000 0.00 0.00 35.56 3.42
98 99 2.833794 TGAAAACACGTCAAGGAGAGG 58.166 47.619 0.00 0.00 38.10 3.69
106 107 6.034363 CACAAATGTTGAATGAAAACACGTCA 59.966 34.615 0.00 0.00 40.16 4.35
116 117 4.452114 CGGAGACTCACAAATGTTGAATGA 59.548 41.667 4.53 0.00 0.00 2.57
155 156 5.393027 CCAGTTTCCGATCACTTATTTTGGG 60.393 44.000 0.00 0.00 0.00 4.12
158 159 4.157840 GGCCAGTTTCCGATCACTTATTTT 59.842 41.667 0.00 0.00 0.00 1.82
194 195 3.826157 CCCATGTGTATGTTGACCTGTTT 59.174 43.478 0.00 0.00 32.21 2.83
203 204 0.618458 ACGAGGCCCATGTGTATGTT 59.382 50.000 0.00 0.00 32.21 2.71
204 205 0.178068 GACGAGGCCCATGTGTATGT 59.822 55.000 0.00 0.00 32.21 2.29
211 212 1.817099 GCTGAAGACGAGGCCCATG 60.817 63.158 0.00 0.00 0.00 3.66
226 227 1.208259 GTTTTGTTTTGGCGAGGCTG 58.792 50.000 0.00 0.00 0.00 4.85
260 261 8.293157 GCAACTCTCAGAGCTTAAGTTAATTTT 58.707 33.333 0.00 0.00 32.04 1.82
266 267 4.565022 GAGCAACTCTCAGAGCTTAAGTT 58.435 43.478 0.00 0.00 41.51 2.66
275 277 1.547820 AGCATTCGAGCAACTCTCAGA 59.452 47.619 0.00 0.00 41.98 3.27
303 305 8.547069 CCTCGAGAAAGCAAGAAATCTAATTAG 58.453 37.037 15.71 6.11 0.00 1.73
341 345 9.121517 CAATATGCCGATGATACAATTCTTTTC 57.878 33.333 0.00 0.00 0.00 2.29
344 348 7.984422 TCAATATGCCGATGATACAATTCTT 57.016 32.000 0.00 0.00 0.00 2.52
350 354 5.482163 TCCTTCAATATGCCGATGATACA 57.518 39.130 0.00 0.00 0.00 2.29
389 393 7.490657 TTGATGGGTAGTGAACTATACAACT 57.509 36.000 0.00 0.00 0.00 3.16
390 394 8.732746 AATTGATGGGTAGTGAACTATACAAC 57.267 34.615 0.00 0.00 0.00 3.32
391 395 9.173021 CAAATTGATGGGTAGTGAACTATACAA 57.827 33.333 0.00 0.00 0.00 2.41
393 397 7.255139 GCCAAATTGATGGGTAGTGAACTATAC 60.255 40.741 0.00 0.00 41.01 1.47
394 398 6.770785 GCCAAATTGATGGGTAGTGAACTATA 59.229 38.462 0.00 0.00 41.01 1.31
397 401 3.763897 GCCAAATTGATGGGTAGTGAACT 59.236 43.478 0.00 0.00 41.01 3.01
398 402 3.119137 GGCCAAATTGATGGGTAGTGAAC 60.119 47.826 0.00 0.00 41.01 3.18
427 432 1.199789 GTCATGATTGAGCGTGCCAAA 59.800 47.619 0.00 0.00 30.85 3.28
489 494 3.200483 TGATTGCGACAAGATGATCCAG 58.800 45.455 0.00 0.00 0.00 3.86
492 497 6.057627 AGAAATGATTGCGACAAGATGATC 57.942 37.500 0.00 0.00 0.00 2.92
497 502 3.745975 ACGAAGAAATGATTGCGACAAGA 59.254 39.130 0.00 0.00 0.00 3.02
510 515 7.206687 TGGCAACTATTTTCAAACGAAGAAAT 58.793 30.769 0.00 0.00 34.35 2.17
556 561 8.263640 AGTTTCATGATTAGAGATAGTGTTGCT 58.736 33.333 0.00 0.00 0.00 3.91
570 575 7.573656 GCGCAATGATCCATAGTTTCATGATTA 60.574 37.037 0.30 0.00 30.76 1.75
572 577 5.335426 GCGCAATGATCCATAGTTTCATGAT 60.335 40.000 0.30 0.00 30.76 2.45
573 578 4.023792 GCGCAATGATCCATAGTTTCATGA 60.024 41.667 0.30 0.00 30.76 3.07
576 581 3.065233 GTGCGCAATGATCCATAGTTTCA 59.935 43.478 14.00 0.00 0.00 2.69
577 582 3.313526 AGTGCGCAATGATCCATAGTTTC 59.686 43.478 14.00 0.00 0.00 2.78
603 608 8.842358 TCTTGTAATGAAAGGATTTTCTACGT 57.158 30.769 0.00 0.00 39.27 3.57
604 609 8.936864 ACTCTTGTAATGAAAGGATTTTCTACG 58.063 33.333 2.21 0.00 39.27 3.51
631 636 8.862325 TTGCCTCTTCTAATATTGACTTTGAA 57.138 30.769 0.00 0.00 0.00 2.69
632 637 8.862325 TTTGCCTCTTCTAATATTGACTTTGA 57.138 30.769 0.00 0.00 0.00 2.69
633 638 9.346725 GTTTTGCCTCTTCTAATATTGACTTTG 57.653 33.333 0.00 0.00 0.00 2.77
634 639 8.237267 CGTTTTGCCTCTTCTAATATTGACTTT 58.763 33.333 0.00 0.00 0.00 2.66
635 640 7.606456 TCGTTTTGCCTCTTCTAATATTGACTT 59.394 33.333 0.00 0.00 0.00 3.01
636 641 7.103641 TCGTTTTGCCTCTTCTAATATTGACT 58.896 34.615 0.00 0.00 0.00 3.41
637 642 7.303634 TCGTTTTGCCTCTTCTAATATTGAC 57.696 36.000 0.00 0.00 0.00 3.18
638 643 7.414098 GCTTCGTTTTGCCTCTTCTAATATTGA 60.414 37.037 0.00 0.00 0.00 2.57
639 644 6.688813 GCTTCGTTTTGCCTCTTCTAATATTG 59.311 38.462 0.00 0.00 0.00 1.90
640 645 6.183360 GGCTTCGTTTTGCCTCTTCTAATATT 60.183 38.462 0.00 0.00 45.26 1.28
641 646 5.297029 GGCTTCGTTTTGCCTCTTCTAATAT 59.703 40.000 0.00 0.00 45.26 1.28
642 647 4.634443 GGCTTCGTTTTGCCTCTTCTAATA 59.366 41.667 0.00 0.00 45.26 0.98
643 648 3.440522 GGCTTCGTTTTGCCTCTTCTAAT 59.559 43.478 0.00 0.00 45.26 1.73
644 649 2.812011 GGCTTCGTTTTGCCTCTTCTAA 59.188 45.455 0.00 0.00 45.26 2.10
645 650 2.423577 GGCTTCGTTTTGCCTCTTCTA 58.576 47.619 0.00 0.00 45.26 2.10
646 651 1.239347 GGCTTCGTTTTGCCTCTTCT 58.761 50.000 0.00 0.00 45.26 2.85
647 652 0.110192 CGGCTTCGTTTTGCCTCTTC 60.110 55.000 0.00 0.00 46.42 2.87
648 653 0.818040 ACGGCTTCGTTTTGCCTCTT 60.818 50.000 0.00 0.00 45.87 2.85
649 654 0.034337 TACGGCTTCGTTTTGCCTCT 59.966 50.000 0.00 0.00 45.87 3.69
650 655 0.165295 GTACGGCTTCGTTTTGCCTC 59.835 55.000 0.00 0.00 45.87 4.70
651 656 0.533308 TGTACGGCTTCGTTTTGCCT 60.533 50.000 0.00 0.00 45.87 4.75
652 657 0.519961 ATGTACGGCTTCGTTTTGCC 59.480 50.000 0.00 0.00 45.87 4.52
653 658 2.765918 GTATGTACGGCTTCGTTTTGC 58.234 47.619 0.00 0.00 45.87 3.68
654 659 3.016177 CGTATGTACGGCTTCGTTTTG 57.984 47.619 4.72 0.00 45.87 2.44
692 697 2.027073 TTCATGTCCGTCGCACTGC 61.027 57.895 0.00 0.00 0.00 4.40
693 698 1.781555 GTTCATGTCCGTCGCACTG 59.218 57.895 0.00 0.00 0.00 3.66
694 699 1.733041 CGTTCATGTCCGTCGCACT 60.733 57.895 0.00 0.00 0.00 4.40
695 700 2.769617 CGTTCATGTCCGTCGCAC 59.230 61.111 0.00 0.00 0.00 5.34
696 701 3.109547 GCGTTCATGTCCGTCGCA 61.110 61.111 13.79 0.00 45.01 5.10
697 702 1.966493 AATGCGTTCATGTCCGTCGC 61.966 55.000 12.55 12.55 45.70 5.19
698 703 0.247262 CAATGCGTTCATGTCCGTCG 60.247 55.000 8.19 0.00 32.23 5.12
699 704 1.075542 TCAATGCGTTCATGTCCGTC 58.924 50.000 8.19 2.88 32.23 4.79
700 705 0.796312 GTCAATGCGTTCATGTCCGT 59.204 50.000 8.19 0.00 32.23 4.69
701 706 0.247262 CGTCAATGCGTTCATGTCCG 60.247 55.000 0.00 0.00 32.23 4.79
702 707 1.075542 TCGTCAATGCGTTCATGTCC 58.924 50.000 0.00 0.00 32.23 4.02
703 708 2.157668 AGTTCGTCAATGCGTTCATGTC 59.842 45.455 0.00 0.00 32.23 3.06
704 709 2.096268 CAGTTCGTCAATGCGTTCATGT 60.096 45.455 0.00 0.00 32.23 3.21
705 710 2.096268 ACAGTTCGTCAATGCGTTCATG 60.096 45.455 0.00 0.00 32.23 3.07
706 711 2.143122 ACAGTTCGTCAATGCGTTCAT 58.857 42.857 0.00 0.00 33.53 2.57
707 712 1.577468 ACAGTTCGTCAATGCGTTCA 58.423 45.000 0.00 0.00 0.00 3.18
708 713 2.221055 AGAACAGTTCGTCAATGCGTTC 59.779 45.455 7.68 0.00 33.22 3.95
709 714 2.210116 AGAACAGTTCGTCAATGCGTT 58.790 42.857 7.68 0.00 34.02 4.84
710 715 1.865865 AGAACAGTTCGTCAATGCGT 58.134 45.000 7.68 0.00 34.02 5.24
711 716 2.718789 CGAAGAACAGTTCGTCAATGCG 60.719 50.000 23.71 10.37 43.51 4.73
712 717 2.827555 CGAAGAACAGTTCGTCAATGC 58.172 47.619 23.71 3.18 43.51 3.56
766 771 3.044059 GACAGCAATCTGCCGGCAC 62.044 63.158 29.03 16.31 46.52 5.01
767 772 2.747460 GACAGCAATCTGCCGGCA 60.747 61.111 30.59 30.59 46.52 5.69
768 773 2.437359 AGACAGCAATCTGCCGGC 60.437 61.111 22.73 22.73 46.52 6.13
769 774 3.494378 CAGACAGCAATCTGCCGG 58.506 61.111 0.00 0.00 46.52 6.13
774 779 0.036952 CCGGTGACAGACAGCAATCT 60.037 55.000 0.00 0.00 45.96 2.40
775 780 1.639298 GCCGGTGACAGACAGCAATC 61.639 60.000 1.90 0.00 45.96 2.67
776 781 1.672356 GCCGGTGACAGACAGCAAT 60.672 57.895 1.90 0.00 45.96 3.56
777 782 2.280797 GCCGGTGACAGACAGCAA 60.281 61.111 1.90 0.00 45.96 3.91
778 783 4.662961 CGCCGGTGACAGACAGCA 62.663 66.667 10.20 0.00 45.96 4.41
779 784 3.277211 TACGCCGGTGACAGACAGC 62.277 63.158 24.59 0.00 42.73 4.40
780 785 1.154016 CTACGCCGGTGACAGACAG 60.154 63.158 24.59 4.69 0.00 3.51
781 786 0.606130 TACTACGCCGGTGACAGACA 60.606 55.000 24.59 8.80 0.00 3.41
782 787 0.098376 CTACTACGCCGGTGACAGAC 59.902 60.000 24.59 0.00 0.00 3.51
783 788 1.028330 CCTACTACGCCGGTGACAGA 61.028 60.000 24.59 3.05 0.00 3.41
784 789 1.028330 TCCTACTACGCCGGTGACAG 61.028 60.000 24.59 19.59 0.00 3.51
785 790 1.002257 TCCTACTACGCCGGTGACA 60.002 57.895 24.59 8.00 0.00 3.58
786 791 1.308069 TGTCCTACTACGCCGGTGAC 61.308 60.000 24.59 7.98 0.00 3.67
787 792 1.002257 TGTCCTACTACGCCGGTGA 60.002 57.895 24.59 4.37 0.00 4.02
788 793 1.432251 CTGTCCTACTACGCCGGTG 59.568 63.158 14.93 14.93 0.00 4.94
789 794 2.413142 GCTGTCCTACTACGCCGGT 61.413 63.158 1.90 0.00 0.00 5.28
790 795 2.337749 CTGCTGTCCTACTACGCCGG 62.338 65.000 0.00 0.00 0.00 6.13
791 796 1.064296 CTGCTGTCCTACTACGCCG 59.936 63.158 0.00 0.00 0.00 6.46
792 797 1.437986 CCTGCTGTCCTACTACGCC 59.562 63.158 0.00 0.00 0.00 5.68
793 798 1.227002 GCCTGCTGTCCTACTACGC 60.227 63.158 0.00 0.00 0.00 4.42
794 799 0.179134 GTGCCTGCTGTCCTACTACG 60.179 60.000 0.00 0.00 0.00 3.51
795 800 0.175989 GGTGCCTGCTGTCCTACTAC 59.824 60.000 0.00 0.00 0.00 2.73
796 801 1.320344 CGGTGCCTGCTGTCCTACTA 61.320 60.000 0.00 0.00 0.00 1.82
797 802 2.650116 CGGTGCCTGCTGTCCTACT 61.650 63.158 0.00 0.00 0.00 2.57
798 803 2.125512 CGGTGCCTGCTGTCCTAC 60.126 66.667 0.00 0.00 0.00 3.18
799 804 3.390521 CCGGTGCCTGCTGTCCTA 61.391 66.667 0.00 0.00 0.00 2.94
822 827 2.184579 GCTCTAGGTGGTGTCGCC 59.815 66.667 0.00 0.00 43.69 5.54
823 828 2.202623 CGCTCTAGGTGGTGTCGC 60.203 66.667 0.00 0.00 0.00 5.19
824 829 2.202623 GCGCTCTAGGTGGTGTCG 60.203 66.667 0.00 0.00 0.00 4.35
825 830 2.202623 CGCGCTCTAGGTGGTGTC 60.203 66.667 5.56 0.00 0.00 3.67
826 831 4.436998 GCGCGCTCTAGGTGGTGT 62.437 66.667 26.67 0.00 0.00 4.16
865 870 4.720902 TGCATGGACGCCAGGTGG 62.721 66.667 4.64 0.00 37.65 4.61
866 871 3.434319 GTGCATGGACGCCAGGTG 61.434 66.667 0.10 0.00 37.65 4.00
867 872 4.722700 GGTGCATGGACGCCAGGT 62.723 66.667 11.52 0.00 37.65 4.00
869 874 4.720902 TGGGTGCATGGACGCCAG 62.721 66.667 27.42 0.00 42.27 4.85
870 875 3.993614 GATGGGTGCATGGACGCCA 62.994 63.158 27.42 25.02 42.27 5.69
871 876 3.211963 GATGGGTGCATGGACGCC 61.212 66.667 27.42 20.92 39.62 5.68
872 877 2.124570 AGATGGGTGCATGGACGC 60.125 61.111 24.66 24.66 0.00 5.19
873 878 1.524621 GGAGATGGGTGCATGGACG 60.525 63.158 11.52 0.00 0.00 4.79
874 879 0.184451 ATGGAGATGGGTGCATGGAC 59.816 55.000 9.16 9.16 0.00 4.02
875 880 0.475475 GATGGAGATGGGTGCATGGA 59.525 55.000 0.00 0.00 0.00 3.41
876 881 0.887836 CGATGGAGATGGGTGCATGG 60.888 60.000 0.00 0.00 0.00 3.66
877 882 1.512996 GCGATGGAGATGGGTGCATG 61.513 60.000 0.00 0.00 0.00 4.06
878 883 1.228063 GCGATGGAGATGGGTGCAT 60.228 57.895 0.00 0.00 0.00 3.96
879 884 2.190313 GCGATGGAGATGGGTGCA 59.810 61.111 0.00 0.00 0.00 4.57
880 885 1.596477 GAGCGATGGAGATGGGTGC 60.596 63.158 0.00 0.00 0.00 5.01
881 886 1.300465 CGAGCGATGGAGATGGGTG 60.300 63.158 0.00 0.00 0.00 4.61
882 887 1.758514 ACGAGCGATGGAGATGGGT 60.759 57.895 0.00 0.00 0.00 4.51
883 888 1.300465 CACGAGCGATGGAGATGGG 60.300 63.158 0.00 0.00 0.00 4.00
884 889 1.300465 CCACGAGCGATGGAGATGG 60.300 63.158 0.00 0.00 39.87 3.51
885 890 1.953138 GCCACGAGCGATGGAGATG 60.953 63.158 13.15 0.00 39.87 2.90
886 891 2.419198 GCCACGAGCGATGGAGAT 59.581 61.111 13.15 0.00 39.87 2.75
895 900 1.373570 ATTTAGAGCTTGCCACGAGC 58.626 50.000 0.00 0.00 44.14 5.03
896 901 2.476854 GCAATTTAGAGCTTGCCACGAG 60.477 50.000 0.00 0.00 41.45 4.18
897 902 1.468520 GCAATTTAGAGCTTGCCACGA 59.531 47.619 0.00 0.00 41.45 4.35
898 903 1.900237 GCAATTTAGAGCTTGCCACG 58.100 50.000 0.00 0.00 41.45 4.94
902 907 1.900237 CGTGGCAATTTAGAGCTTGC 58.100 50.000 0.00 0.00 45.46 4.01
903 908 1.791555 CGCGTGGCAATTTAGAGCTTG 60.792 52.381 0.00 0.00 0.00 4.01
904 909 0.447801 CGCGTGGCAATTTAGAGCTT 59.552 50.000 0.00 0.00 0.00 3.74
905 910 1.982073 GCGCGTGGCAATTTAGAGCT 61.982 55.000 8.43 0.00 42.87 4.09
906 911 1.583709 GCGCGTGGCAATTTAGAGC 60.584 57.895 8.43 0.00 42.87 4.09
907 912 1.296867 CGCGCGTGGCAATTTAGAG 60.297 57.895 24.19 0.00 43.84 2.43
908 913 2.781957 CGCGCGTGGCAATTTAGA 59.218 55.556 24.19 0.00 43.84 2.10
909 914 2.944049 GCGCGCGTGGCAATTTAG 60.944 61.111 32.35 0.00 43.84 1.85
910 915 4.468615 GGCGCGCGTGGCAATTTA 62.469 61.111 37.03 0.00 43.84 1.40
935 940 1.342819 AGATTATCAGTCGGCAGGAGC 59.657 52.381 0.00 0.00 41.10 4.70
936 941 2.029470 GGAGATTATCAGTCGGCAGGAG 60.029 54.545 0.00 0.00 0.00 3.69
937 942 1.964223 GGAGATTATCAGTCGGCAGGA 59.036 52.381 0.00 0.00 0.00 3.86
938 943 1.336332 CGGAGATTATCAGTCGGCAGG 60.336 57.143 0.00 0.00 0.00 4.85
939 944 1.336332 CCGGAGATTATCAGTCGGCAG 60.336 57.143 0.00 0.00 0.00 4.85
940 945 0.673985 CCGGAGATTATCAGTCGGCA 59.326 55.000 0.00 0.00 0.00 5.69
941 946 0.038159 CCCGGAGATTATCAGTCGGC 60.038 60.000 0.73 0.00 36.57 5.54
942 947 1.617322 TCCCGGAGATTATCAGTCGG 58.383 55.000 0.73 11.72 37.50 4.79
943 948 2.029828 CCTTCCCGGAGATTATCAGTCG 60.030 54.545 0.73 0.00 33.16 4.18
944 949 3.231818 TCCTTCCCGGAGATTATCAGTC 58.768 50.000 0.73 0.00 36.69 3.51
945 950 3.330126 TCCTTCCCGGAGATTATCAGT 57.670 47.619 0.73 0.00 36.69 3.41
946 951 4.503991 CCTTTCCTTCCCGGAGATTATCAG 60.504 50.000 0.73 0.00 44.28 2.90
947 952 3.391296 CCTTTCCTTCCCGGAGATTATCA 59.609 47.826 0.73 0.00 44.28 2.15
948 953 3.807561 GCCTTTCCTTCCCGGAGATTATC 60.808 52.174 0.73 0.00 44.28 1.75
949 954 2.106684 GCCTTTCCTTCCCGGAGATTAT 59.893 50.000 0.73 0.00 44.28 1.28
950 955 1.489230 GCCTTTCCTTCCCGGAGATTA 59.511 52.381 0.73 0.00 44.28 1.75
951 956 0.256177 GCCTTTCCTTCCCGGAGATT 59.744 55.000 0.73 0.00 44.28 2.40
952 957 1.915983 GCCTTTCCTTCCCGGAGAT 59.084 57.895 0.73 0.00 44.28 2.75
953 958 2.656069 CGCCTTTCCTTCCCGGAGA 61.656 63.158 0.73 0.00 44.28 3.71
954 959 2.125106 CGCCTTTCCTTCCCGGAG 60.125 66.667 0.73 0.00 44.28 4.63
955 960 4.404098 GCGCCTTTCCTTCCCGGA 62.404 66.667 0.73 0.00 41.06 5.14
957 962 4.715523 TGGCGCCTTTCCTTCCCG 62.716 66.667 29.70 0.00 0.00 5.14
958 963 2.751837 CTGGCGCCTTTCCTTCCC 60.752 66.667 29.70 0.00 0.00 3.97
959 964 2.751837 CCTGGCGCCTTTCCTTCC 60.752 66.667 29.70 0.00 0.00 3.46
960 965 3.443925 GCCTGGCGCCTTTCCTTC 61.444 66.667 29.70 5.83 0.00 3.46
961 966 3.808218 TTGCCTGGCGCCTTTCCTT 62.808 57.895 29.70 0.00 36.24 3.36
962 967 4.284550 TTGCCTGGCGCCTTTCCT 62.285 61.111 29.70 0.00 36.24 3.36
963 968 4.056125 GTTGCCTGGCGCCTTTCC 62.056 66.667 29.70 13.66 36.24 3.13
964 969 3.273080 CTGTTGCCTGGCGCCTTTC 62.273 63.158 29.70 16.20 36.24 2.62
965 970 3.297620 CTGTTGCCTGGCGCCTTT 61.298 61.111 29.70 0.00 36.24 3.11
969 974 4.410743 GAAGCTGTTGCCTGGCGC 62.411 66.667 14.98 11.19 40.80 6.53
970 975 3.741476 GGAAGCTGTTGCCTGGCG 61.741 66.667 14.98 0.00 40.80 5.69
971 976 3.741476 CGGAAGCTGTTGCCTGGC 61.741 66.667 12.87 12.87 40.80 4.85
972 977 2.281761 ACGGAAGCTGTTGCCTGG 60.282 61.111 0.00 0.00 40.80 4.45
973 978 1.597854 TCACGGAAGCTGTTGCCTG 60.598 57.895 0.00 0.00 40.80 4.85
974 979 1.598130 GTCACGGAAGCTGTTGCCT 60.598 57.895 0.00 0.00 40.80 4.75
975 980 2.617274 GGTCACGGAAGCTGTTGCC 61.617 63.158 0.00 0.00 40.80 4.52
976 981 2.946762 GGTCACGGAAGCTGTTGC 59.053 61.111 0.00 0.00 40.05 4.17
977 982 1.594293 ACGGTCACGGAAGCTGTTG 60.594 57.895 0.00 0.00 46.48 3.33
978 983 1.594293 CACGGTCACGGAAGCTGTT 60.594 57.895 0.00 0.00 46.48 3.16
979 984 2.029073 CACGGTCACGGAAGCTGT 59.971 61.111 0.00 0.00 46.48 4.40
980 985 2.022129 GTCACGGTCACGGAAGCTG 61.022 63.158 0.00 0.00 46.48 4.24
981 986 2.338984 GTCACGGTCACGGAAGCT 59.661 61.111 0.00 0.00 46.48 3.74
982 987 2.737376 GGTCACGGTCACGGAAGC 60.737 66.667 0.00 0.00 46.48 3.86
983 988 1.014044 CATGGTCACGGTCACGGAAG 61.014 60.000 0.00 0.00 46.48 3.46
984 989 1.005512 CATGGTCACGGTCACGGAA 60.006 57.895 0.00 0.00 46.48 4.30
985 990 2.654289 CATGGTCACGGTCACGGA 59.346 61.111 0.00 0.00 46.48 4.69
986 991 3.118454 GCATGGTCACGGTCACGG 61.118 66.667 0.00 0.00 46.48 4.94
988 993 2.746277 GGGCATGGTCACGGTCAC 60.746 66.667 0.00 0.00 0.00 3.67
989 994 2.927856 AGGGCATGGTCACGGTCA 60.928 61.111 0.00 0.00 0.00 4.02
990 995 2.436646 CAGGGCATGGTCACGGTC 60.437 66.667 0.00 0.00 0.00 4.79
991 996 4.722700 GCAGGGCATGGTCACGGT 62.723 66.667 0.00 0.00 0.00 4.83
993 998 4.758251 TCGCAGGGCATGGTCACG 62.758 66.667 0.00 0.00 0.00 4.35
994 999 3.127533 GTCGCAGGGCATGGTCAC 61.128 66.667 0.00 0.00 0.00 3.67
995 1000 4.758251 CGTCGCAGGGCATGGTCA 62.758 66.667 0.00 0.00 0.00 4.02
996 1001 4.451150 TCGTCGCAGGGCATGGTC 62.451 66.667 0.00 0.00 0.00 4.02
997 1002 4.760047 GTCGTCGCAGGGCATGGT 62.760 66.667 0.00 0.00 0.00 3.55
1062 1067 4.699522 GGAGTCACGGTGGGTGCC 62.700 72.222 8.50 1.72 46.56 5.01
1065 1070 0.836400 AGATTGGAGTCACGGTGGGT 60.836 55.000 8.50 0.00 0.00 4.51
1066 1071 0.108138 GAGATTGGAGTCACGGTGGG 60.108 60.000 8.50 0.00 0.00 4.61
1067 1072 0.898320 AGAGATTGGAGTCACGGTGG 59.102 55.000 8.50 0.00 0.00 4.61
1069 1074 1.821753 CAGAGAGATTGGAGTCACGGT 59.178 52.381 0.00 0.00 0.00 4.83
1070 1075 1.470632 GCAGAGAGATTGGAGTCACGG 60.471 57.143 0.00 0.00 0.00 4.94
1074 1079 1.473080 GGCTGCAGAGAGATTGGAGTC 60.473 57.143 20.43 0.00 36.50 3.36
1075 1080 0.540923 GGCTGCAGAGAGATTGGAGT 59.459 55.000 20.43 0.00 36.50 3.85
1077 1082 0.540454 CTGGCTGCAGAGAGATTGGA 59.460 55.000 20.43 0.00 0.00 3.53
1078 1083 1.096386 GCTGGCTGCAGAGAGATTGG 61.096 60.000 20.43 0.00 42.31 3.16
1080 1085 4.959399 GCTGGCTGCAGAGAGATT 57.041 55.556 20.43 0.00 42.31 2.40
1096 1101 3.548268 CGAGTAAGTAAGCAAGCTACTGC 59.452 47.826 1.95 1.95 42.97 4.40
1097 1102 4.982999 TCGAGTAAGTAAGCAAGCTACTG 58.017 43.478 0.00 0.00 0.00 2.74
1099 1104 4.352887 CCTCGAGTAAGTAAGCAAGCTAC 58.647 47.826 12.31 0.00 0.00 3.58
1100 1105 3.380637 CCCTCGAGTAAGTAAGCAAGCTA 59.619 47.826 12.31 0.00 0.00 3.32
1101 1106 2.166664 CCCTCGAGTAAGTAAGCAAGCT 59.833 50.000 12.31 0.00 0.00 3.74
1102 1107 2.541556 CCCTCGAGTAAGTAAGCAAGC 58.458 52.381 12.31 0.00 0.00 4.01
1103 1108 2.496470 ACCCCTCGAGTAAGTAAGCAAG 59.504 50.000 12.31 0.00 0.00 4.01
1104 1109 2.494870 GACCCCTCGAGTAAGTAAGCAA 59.505 50.000 12.31 0.00 0.00 3.91
1105 1110 2.097825 GACCCCTCGAGTAAGTAAGCA 58.902 52.381 12.31 0.00 0.00 3.91
1106 1111 1.065251 CGACCCCTCGAGTAAGTAAGC 59.935 57.143 12.31 0.00 43.06 3.09
1107 1112 1.065251 GCGACCCCTCGAGTAAGTAAG 59.935 57.143 12.31 4.84 43.06 2.34
1108 1113 1.098050 GCGACCCCTCGAGTAAGTAA 58.902 55.000 12.31 0.00 43.06 2.24
1109 1114 1.091771 CGCGACCCCTCGAGTAAGTA 61.092 60.000 12.31 0.00 43.06 2.24
1110 1115 2.404995 CGCGACCCCTCGAGTAAGT 61.405 63.158 12.31 5.28 43.06 2.24
1111 1116 2.408022 CGCGACCCCTCGAGTAAG 59.592 66.667 12.31 1.74 43.06 2.34
1115 1120 3.885521 GGTACGCGACCCCTCGAG 61.886 72.222 15.93 5.13 43.25 4.04
1125 1130 2.535984 CAGATCTAGCAAAAGGTACGCG 59.464 50.000 3.53 3.53 0.00 6.01
1127 1132 3.791887 CGTCAGATCTAGCAAAAGGTACG 59.208 47.826 0.00 0.00 0.00 3.67
1130 1135 3.006967 ACACGTCAGATCTAGCAAAAGGT 59.993 43.478 0.00 0.00 0.00 3.50
1141 1147 0.039437 ACACCGACACACGTCAGATC 60.039 55.000 0.00 0.00 42.74 2.75
1425 1450 2.224281 TGAACAGAGCAGGTAACACTGG 60.224 50.000 0.00 0.00 38.90 4.00
1426 1451 3.062763 CTGAACAGAGCAGGTAACACTG 58.937 50.000 0.00 0.00 41.41 3.66
1427 1452 2.700897 ACTGAACAGAGCAGGTAACACT 59.299 45.455 8.87 0.00 37.69 3.55
1428 1453 3.060602 GACTGAACAGAGCAGGTAACAC 58.939 50.000 8.87 0.00 37.69 3.32
1429 1454 2.965831 AGACTGAACAGAGCAGGTAACA 59.034 45.455 8.87 0.00 37.69 2.41
1430 1455 3.669251 AGACTGAACAGAGCAGGTAAC 57.331 47.619 8.87 0.00 37.69 2.50
1432 1457 4.035612 AGTAGACTGAACAGAGCAGGTA 57.964 45.455 8.87 0.00 37.69 3.08
1433 1458 2.883026 AGTAGACTGAACAGAGCAGGT 58.117 47.619 8.87 0.00 37.69 4.00
1434 1459 5.347342 CATTAGTAGACTGAACAGAGCAGG 58.653 45.833 8.87 0.00 37.69 4.85
1435 1460 5.347342 CCATTAGTAGACTGAACAGAGCAG 58.653 45.833 8.87 0.00 39.26 4.24
1437 1462 4.116238 GCCATTAGTAGACTGAACAGAGC 58.884 47.826 8.87 0.81 0.00 4.09
1438 1463 5.330455 TGCCATTAGTAGACTGAACAGAG 57.670 43.478 8.87 0.00 0.00 3.35
1439 1464 5.422012 TCATGCCATTAGTAGACTGAACAGA 59.578 40.000 8.87 0.00 0.00 3.41
1440 1465 5.664457 TCATGCCATTAGTAGACTGAACAG 58.336 41.667 0.00 0.00 0.00 3.16
1441 1466 5.675684 TCATGCCATTAGTAGACTGAACA 57.324 39.130 0.00 0.00 0.00 3.18
1442 1467 8.662781 TTATTCATGCCATTAGTAGACTGAAC 57.337 34.615 0.00 0.00 0.00 3.18
1443 1468 8.704668 TCTTATTCATGCCATTAGTAGACTGAA 58.295 33.333 0.00 0.00 0.00 3.02
1444 1469 8.250143 TCTTATTCATGCCATTAGTAGACTGA 57.750 34.615 0.00 0.00 0.00 3.41
1567 1592 1.959985 AGTGAGTGAGTGAGTGAGTGG 59.040 52.381 0.00 0.00 0.00 4.00
1568 1593 2.620585 TGAGTGAGTGAGTGAGTGAGTG 59.379 50.000 0.00 0.00 0.00 3.51
1569 1594 2.621055 GTGAGTGAGTGAGTGAGTGAGT 59.379 50.000 0.00 0.00 0.00 3.41
1570 1595 2.030363 GGTGAGTGAGTGAGTGAGTGAG 60.030 54.545 0.00 0.00 0.00 3.51
1593 1618 1.002033 GCCGGATTTGTGATGAGATGC 60.002 52.381 5.05 0.00 0.00 3.91
1628 1653 8.237267 TGTTTTTCTCTCTTCTTCTTGTGTTTC 58.763 33.333 0.00 0.00 0.00 2.78
1643 1668 4.729227 TTTTGGGGTGTGTTTTTCTCTC 57.271 40.909 0.00 0.00 0.00 3.20
1648 1673 5.046231 ACAGTACATTTTGGGGTGTGTTTTT 60.046 36.000 0.00 0.00 0.00 1.94
1705 1731 1.410517 ACTGACTGACTGACTGTGTGG 59.589 52.381 0.00 0.00 0.00 4.17
1802 1832 3.398920 GACGACGTCGACGGGATA 58.601 61.111 41.52 0.00 44.95 2.59
1953 1983 3.909258 GAAGAGCGTCGGCGGACAA 62.909 63.158 22.40 0.00 46.35 3.18
1961 1991 2.202492 CCACCGAGAAGAGCGTCG 60.202 66.667 0.00 0.00 35.91 5.12
2115 2148 0.368227 GCGTTCGAGCAAGTCATCTG 59.632 55.000 0.00 0.00 37.05 2.90
2118 2151 1.741770 GGGCGTTCGAGCAAGTCAT 60.742 57.895 0.00 0.00 39.27 3.06
2210 2243 3.432588 AGAGCCGTCCTCGTCGTG 61.433 66.667 0.00 0.00 45.54 4.35
2273 2306 0.459237 CAGCAGTCCAGGACGATGAC 60.459 60.000 19.02 8.68 37.67 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.