Multiple sequence alignment - TraesCS5A01G496300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G496300 chr5A 100.000 3297 0 0 1 3297 663770757 663767461 0.000000e+00 6089.0
1 TraesCS5A01G496300 chr5A 76.215 576 80 37 1101 1634 403756503 403757063 5.460000e-63 252.0
2 TraesCS5A01G496300 chr4D 88.728 1801 126 36 965 2714 483837865 483836091 0.000000e+00 2130.0
3 TraesCS5A01G496300 chr4D 92.020 401 30 2 181 580 483848115 483847716 2.220000e-156 562.0
4 TraesCS5A01G496300 chr4D 95.548 292 13 0 630 921 483838153 483837862 4.980000e-128 468.0
5 TraesCS5A01G496300 chr4B 93.586 1294 50 11 762 2049 614280831 614279565 0.000000e+00 1899.0
6 TraesCS5A01G496300 chr4B 86.789 492 44 13 2261 2748 614264980 614264506 2.250000e-146 529.0
7 TraesCS5A01G496300 chr4B 90.338 207 20 0 2065 2271 614279515 614279309 4.190000e-69 272.0
8 TraesCS5A01G496300 chr4B 77.632 304 26 14 2988 3286 614262338 614262072 2.650000e-31 147.0
9 TraesCS5A01G496300 chr4B 92.982 57 4 0 3241 3297 456364781 456364725 2.110000e-12 84.2
10 TraesCS5A01G496300 chr6A 85.124 363 44 5 228 580 93456158 93456520 2.420000e-96 363.0
11 TraesCS5A01G496300 chr5D 76.408 568 84 35 1102 1634 310258933 310259485 9.070000e-66 261.0
12 TraesCS5A01G496300 chr5B 82.334 317 38 11 1327 1634 356215400 356215707 3.260000e-65 259.0
13 TraesCS5A01G496300 chr4A 95.238 126 5 1 42 166 16344020 16343895 7.220000e-47 198.0
14 TraesCS5A01G496300 chr4A 97.436 39 1 0 1 39 319843870 319843908 2.120000e-07 67.6
15 TraesCS5A01G496300 chr3B 80.851 141 20 4 43 177 303099678 303099817 1.620000e-18 104.0
16 TraesCS5A01G496300 chr1A 100.000 40 0 0 1 40 65823192 65823153 1.270000e-09 75.0
17 TraesCS5A01G496300 chr3A 97.500 40 1 0 1 40 99312199 99312238 5.900000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G496300 chr5A 663767461 663770757 3296 True 6089.0 6089 100.0000 1 3297 1 chr5A.!!$R1 3296
1 TraesCS5A01G496300 chr5A 403756503 403757063 560 False 252.0 252 76.2150 1101 1634 1 chr5A.!!$F1 533
2 TraesCS5A01G496300 chr4D 483836091 483838153 2062 True 1299.0 2130 92.1380 630 2714 2 chr4D.!!$R2 2084
3 TraesCS5A01G496300 chr4B 614279309 614280831 1522 True 1085.5 1899 91.9620 762 2271 2 chr4B.!!$R3 1509
4 TraesCS5A01G496300 chr4B 614262072 614264980 2908 True 338.0 529 82.2105 2261 3286 2 chr4B.!!$R2 1025
5 TraesCS5A01G496300 chr5D 310258933 310259485 552 False 261.0 261 76.4080 1102 1634 1 chr5D.!!$F1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
358 359 0.032815 TCCGTGTCGCATCAAAGTGA 59.967 50.0 0.0 0.0 0.0 3.41 F
610 611 0.036388 GAGGATGGGCACGAGACAAA 60.036 55.0 0.0 0.0 0.0 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2206 2329 0.396435 TCCATCGTCCCATACATGCC 59.604 55.000 0.00 0.0 0.0 4.40 R
2585 2718 1.270412 CGGCCACTAGTACCACAACAA 60.270 52.381 2.24 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.050351 CTGTTCGTCGCCAGTCGT 60.050 61.111 4.21 0.00 39.67 4.34
18 19 2.354188 TGTTCGTCGCCAGTCGTG 60.354 61.111 0.00 0.00 39.67 4.35
19 20 2.354305 GTTCGTCGCCAGTCGTGT 60.354 61.111 0.00 0.00 39.67 4.49
20 21 1.947642 GTTCGTCGCCAGTCGTGTT 60.948 57.895 0.00 0.00 39.67 3.32
21 22 1.947146 TTCGTCGCCAGTCGTGTTG 60.947 57.895 0.00 0.00 39.67 3.33
22 23 4.059459 CGTCGCCAGTCGTGTTGC 62.059 66.667 0.00 0.00 39.67 4.17
23 24 2.661866 GTCGCCAGTCGTGTTGCT 60.662 61.111 0.00 0.00 39.67 3.91
24 25 1.372499 GTCGCCAGTCGTGTTGCTA 60.372 57.895 0.00 0.00 39.67 3.49
25 26 1.372499 TCGCCAGTCGTGTTGCTAC 60.372 57.895 0.00 0.00 39.67 3.58
26 27 1.372997 CGCCAGTCGTGTTGCTACT 60.373 57.895 0.00 0.00 0.00 2.57
27 28 1.344942 CGCCAGTCGTGTTGCTACTC 61.345 60.000 0.00 0.00 0.00 2.59
28 29 1.344942 GCCAGTCGTGTTGCTACTCG 61.345 60.000 14.99 14.99 41.32 4.18
29 30 0.240145 CCAGTCGTGTTGCTACTCGA 59.760 55.000 18.77 18.77 44.98 4.04
30 31 1.607713 CAGTCGTGTTGCTACTCGAG 58.392 55.000 22.12 11.84 46.91 4.04
39 40 4.310672 CTACTCGAGCACGCCATC 57.689 61.111 13.61 0.00 39.58 3.51
40 41 1.299468 CTACTCGAGCACGCCATCC 60.299 63.158 13.61 0.00 39.58 3.51
41 42 2.685387 CTACTCGAGCACGCCATCCC 62.685 65.000 13.61 0.00 39.58 3.85
52 53 2.045340 CCATCCCGGCGGTTTTCT 60.045 61.111 26.32 0.82 0.00 2.52
53 54 2.406616 CCATCCCGGCGGTTTTCTG 61.407 63.158 26.32 13.48 0.00 3.02
54 55 1.376683 CATCCCGGCGGTTTTCTGA 60.377 57.895 26.32 14.10 0.00 3.27
55 56 0.748005 CATCCCGGCGGTTTTCTGAT 60.748 55.000 26.32 15.86 0.00 2.90
56 57 0.748005 ATCCCGGCGGTTTTCTGATG 60.748 55.000 26.32 5.90 0.00 3.07
57 58 1.376683 CCCGGCGGTTTTCTGATGA 60.377 57.895 26.32 0.00 0.00 2.92
58 59 1.369091 CCCGGCGGTTTTCTGATGAG 61.369 60.000 26.32 0.00 0.00 2.90
59 60 1.425428 CGGCGGTTTTCTGATGAGC 59.575 57.895 0.00 0.00 0.00 4.26
60 61 1.021390 CGGCGGTTTTCTGATGAGCT 61.021 55.000 0.00 0.00 0.00 4.09
61 62 0.729690 GGCGGTTTTCTGATGAGCTC 59.270 55.000 6.82 6.82 0.00 4.09
62 63 0.371645 GCGGTTTTCTGATGAGCTCG 59.628 55.000 9.64 0.00 0.00 5.03
63 64 1.714794 CGGTTTTCTGATGAGCTCGT 58.285 50.000 8.55 8.55 0.00 4.18
64 65 1.391485 CGGTTTTCTGATGAGCTCGTG 59.609 52.381 14.59 0.00 0.00 4.35
65 66 1.734465 GGTTTTCTGATGAGCTCGTGG 59.266 52.381 14.59 6.17 0.00 4.94
66 67 1.129437 GTTTTCTGATGAGCTCGTGGC 59.871 52.381 14.59 0.00 42.19 5.01
67 68 0.391661 TTTCTGATGAGCTCGTGGCC 60.392 55.000 14.59 0.00 43.05 5.36
68 69 2.563050 TTCTGATGAGCTCGTGGCCG 62.563 60.000 14.59 0.00 43.05 6.13
69 70 4.819761 TGATGAGCTCGTGGCCGC 62.820 66.667 14.59 6.11 43.05 6.53
122 123 2.737376 GCGGGGTCGTGACAGAAC 60.737 66.667 2.00 0.00 38.89 3.01
125 126 2.048503 GGGTCGTGACAGAACCGG 60.049 66.667 0.00 0.00 38.36 5.28
126 127 2.732658 GGTCGTGACAGAACCGGT 59.267 61.111 0.00 0.00 0.00 5.28
127 128 1.663702 GGTCGTGACAGAACCGGTG 60.664 63.158 8.52 0.00 0.00 4.94
128 129 1.066918 GTCGTGACAGAACCGGTGT 59.933 57.895 8.52 0.33 0.00 4.16
129 130 1.066752 TCGTGACAGAACCGGTGTG 59.933 57.895 8.52 12.24 0.00 3.82
130 131 2.594962 CGTGACAGAACCGGTGTGC 61.595 63.158 8.52 6.29 0.00 4.57
131 132 1.522806 GTGACAGAACCGGTGTGCA 60.523 57.895 8.52 8.88 0.00 4.57
132 133 1.227527 TGACAGAACCGGTGTGCAG 60.228 57.895 8.52 0.00 0.00 4.41
133 134 2.591715 ACAGAACCGGTGTGCAGC 60.592 61.111 8.52 0.00 0.00 5.25
134 135 2.281070 CAGAACCGGTGTGCAGCT 60.281 61.111 8.52 0.00 0.00 4.24
135 136 2.031163 AGAACCGGTGTGCAGCTC 59.969 61.111 8.52 0.00 0.00 4.09
136 137 2.280797 GAACCGGTGTGCAGCTCA 60.281 61.111 8.52 0.00 0.00 4.26
137 138 2.281070 AACCGGTGTGCAGCTCAG 60.281 61.111 8.52 0.00 0.00 3.35
138 139 3.832237 AACCGGTGTGCAGCTCAGG 62.832 63.158 8.52 0.00 33.23 3.86
139 140 4.007644 CCGGTGTGCAGCTCAGGA 62.008 66.667 0.00 0.00 0.00 3.86
140 141 2.433838 CGGTGTGCAGCTCAGGAG 60.434 66.667 0.00 0.00 0.00 3.69
141 142 2.046507 GGTGTGCAGCTCAGGAGG 60.047 66.667 0.00 0.00 0.00 4.30
142 143 2.745492 GTGTGCAGCTCAGGAGGC 60.745 66.667 0.00 0.00 0.00 4.70
143 144 4.025858 TGTGCAGCTCAGGAGGCC 62.026 66.667 0.00 0.00 0.00 5.19
164 165 3.267974 GCGGTTTGCAAGAGGGAG 58.732 61.111 0.00 0.00 45.45 4.30
165 166 2.982744 GCGGTTTGCAAGAGGGAGC 61.983 63.158 0.00 0.00 45.45 4.70
166 167 1.600636 CGGTTTGCAAGAGGGAGCA 60.601 57.895 0.00 0.00 39.32 4.26
167 168 1.580845 CGGTTTGCAAGAGGGAGCAG 61.581 60.000 0.00 0.00 42.39 4.24
168 169 1.246737 GGTTTGCAAGAGGGAGCAGG 61.247 60.000 0.00 0.00 42.39 4.85
169 170 0.538287 GTTTGCAAGAGGGAGCAGGT 60.538 55.000 0.00 0.00 42.39 4.00
170 171 0.538057 TTTGCAAGAGGGAGCAGGTG 60.538 55.000 0.00 0.00 42.39 4.00
171 172 1.708993 TTGCAAGAGGGAGCAGGTGT 61.709 55.000 0.00 0.00 42.39 4.16
172 173 1.673665 GCAAGAGGGAGCAGGTGTG 60.674 63.158 0.00 0.00 0.00 3.82
173 174 1.002868 CAAGAGGGAGCAGGTGTGG 60.003 63.158 0.00 0.00 0.00 4.17
174 175 1.152030 AAGAGGGAGCAGGTGTGGA 60.152 57.895 0.00 0.00 0.00 4.02
175 176 1.197430 AAGAGGGAGCAGGTGTGGAG 61.197 60.000 0.00 0.00 0.00 3.86
176 177 1.610673 GAGGGAGCAGGTGTGGAGA 60.611 63.158 0.00 0.00 0.00 3.71
177 178 1.893919 GAGGGAGCAGGTGTGGAGAC 61.894 65.000 0.00 0.00 0.00 3.36
178 179 2.665603 GGAGCAGGTGTGGAGACC 59.334 66.667 0.00 0.00 36.09 3.85
179 180 2.665603 GAGCAGGTGTGGAGACCC 59.334 66.667 0.00 0.00 36.56 4.46
180 181 2.930562 AGCAGGTGTGGAGACCCC 60.931 66.667 0.00 0.00 36.56 4.95
181 182 4.394712 GCAGGTGTGGAGACCCCG 62.395 72.222 0.00 0.00 36.56 5.73
182 183 2.603473 CAGGTGTGGAGACCCCGA 60.603 66.667 0.00 0.00 36.56 5.14
183 184 2.203182 AGGTGTGGAGACCCCGAA 59.797 61.111 0.00 0.00 36.56 4.30
184 185 1.913762 AGGTGTGGAGACCCCGAAG 60.914 63.158 0.00 0.00 36.56 3.79
206 207 2.556287 GTCCTTTGACGCTTGCGG 59.444 61.111 19.19 0.84 0.00 5.69
207 208 2.668212 TCCTTTGACGCTTGCGGG 60.668 61.111 19.19 10.02 0.00 6.13
208 209 4.404654 CCTTTGACGCTTGCGGGC 62.405 66.667 19.19 10.94 0.00 6.13
209 210 3.357079 CTTTGACGCTTGCGGGCT 61.357 61.111 19.19 0.00 0.00 5.19
210 211 2.904866 TTTGACGCTTGCGGGCTT 60.905 55.556 19.19 0.00 0.00 4.35
211 212 2.786564 CTTTGACGCTTGCGGGCTTC 62.787 60.000 19.19 8.02 0.00 3.86
212 213 4.617520 TGACGCTTGCGGGCTTCA 62.618 61.111 19.19 10.47 37.98 3.02
213 214 3.353836 GACGCTTGCGGGCTTCAA 61.354 61.111 19.19 0.00 31.96 2.69
214 215 2.903547 GACGCTTGCGGGCTTCAAA 61.904 57.895 19.19 0.00 31.96 2.69
215 216 2.200170 GACGCTTGCGGGCTTCAAAT 62.200 55.000 19.19 0.00 31.96 2.32
216 217 0.958382 ACGCTTGCGGGCTTCAAATA 60.958 50.000 19.19 0.00 0.00 1.40
217 218 0.248215 CGCTTGCGGGCTTCAAATAG 60.248 55.000 7.16 0.00 0.00 1.73
218 219 0.101219 GCTTGCGGGCTTCAAATAGG 59.899 55.000 0.00 0.00 0.00 2.57
219 220 1.750193 CTTGCGGGCTTCAAATAGGA 58.250 50.000 0.00 0.00 0.00 2.94
220 221 2.301346 CTTGCGGGCTTCAAATAGGAT 58.699 47.619 0.00 0.00 0.00 3.24
221 222 1.967319 TGCGGGCTTCAAATAGGATC 58.033 50.000 0.00 0.00 0.00 3.36
222 223 1.239347 GCGGGCTTCAAATAGGATCC 58.761 55.000 2.48 2.48 0.00 3.36
223 224 1.897560 CGGGCTTCAAATAGGATCCC 58.102 55.000 8.55 0.00 0.00 3.85
224 225 1.878102 CGGGCTTCAAATAGGATCCCG 60.878 57.143 8.55 2.26 42.72 5.14
225 226 1.239347 GGCTTCAAATAGGATCCCGC 58.761 55.000 8.55 0.00 0.00 6.13
226 227 1.476833 GGCTTCAAATAGGATCCCGCA 60.477 52.381 8.55 0.00 0.00 5.69
227 228 2.508526 GCTTCAAATAGGATCCCGCAT 58.491 47.619 8.55 0.00 0.00 4.73
228 229 3.559171 GGCTTCAAATAGGATCCCGCATA 60.559 47.826 8.55 0.00 0.00 3.14
229 230 4.265073 GCTTCAAATAGGATCCCGCATAT 58.735 43.478 8.55 0.00 0.00 1.78
230 231 5.428253 GCTTCAAATAGGATCCCGCATATA 58.572 41.667 8.55 0.00 0.00 0.86
231 232 6.058183 GCTTCAAATAGGATCCCGCATATAT 58.942 40.000 8.55 0.00 0.00 0.86
232 233 6.017605 GCTTCAAATAGGATCCCGCATATATG 60.018 42.308 8.55 8.45 0.00 1.78
233 234 5.928976 TCAAATAGGATCCCGCATATATGG 58.071 41.667 14.51 4.78 0.00 2.74
235 236 0.839946 AGGATCCCGCATATATGGGC 59.160 55.000 21.24 9.67 45.60 5.36
241 242 4.225497 GCATATATGGGCGCCTCC 57.775 61.111 28.56 11.61 0.00 4.30
242 243 1.299648 GCATATATGGGCGCCTCCA 59.700 57.895 28.56 17.84 41.60 3.86
243 244 1.026718 GCATATATGGGCGCCTCCAC 61.027 60.000 28.56 10.32 39.97 4.02
244 245 0.615331 CATATATGGGCGCCTCCACT 59.385 55.000 28.56 10.31 39.97 4.00
245 246 0.615331 ATATATGGGCGCCTCCACTG 59.385 55.000 28.56 0.00 39.97 3.66
246 247 0.762842 TATATGGGCGCCTCCACTGT 60.763 55.000 28.56 8.74 39.97 3.55
247 248 2.044806 ATATGGGCGCCTCCACTGTC 62.045 60.000 28.56 7.32 39.97 3.51
258 259 2.343758 CACTGTCGTGGTGGAGGG 59.656 66.667 0.00 0.00 37.50 4.30
259 260 2.923035 ACTGTCGTGGTGGAGGGG 60.923 66.667 0.00 0.00 0.00 4.79
260 261 4.394712 CTGTCGTGGTGGAGGGGC 62.395 72.222 0.00 0.00 0.00 5.80
261 262 4.954118 TGTCGTGGTGGAGGGGCT 62.954 66.667 0.00 0.00 0.00 5.19
262 263 3.637273 GTCGTGGTGGAGGGGCTT 61.637 66.667 0.00 0.00 0.00 4.35
263 264 3.636231 TCGTGGTGGAGGGGCTTG 61.636 66.667 0.00 0.00 0.00 4.01
264 265 3.953775 CGTGGTGGAGGGGCTTGT 61.954 66.667 0.00 0.00 0.00 3.16
265 266 2.520968 GTGGTGGAGGGGCTTGTT 59.479 61.111 0.00 0.00 0.00 2.83
266 267 1.903404 GTGGTGGAGGGGCTTGTTG 60.903 63.158 0.00 0.00 0.00 3.33
267 268 2.081787 TGGTGGAGGGGCTTGTTGA 61.082 57.895 0.00 0.00 0.00 3.18
268 269 1.603739 GGTGGAGGGGCTTGTTGAC 60.604 63.158 0.00 0.00 0.00 3.18
269 270 1.603739 GTGGAGGGGCTTGTTGACC 60.604 63.158 0.00 0.00 45.48 4.02
274 275 2.112297 GGGCTTGTTGACCCGACA 59.888 61.111 0.00 0.00 38.13 4.35
275 276 1.303317 GGGCTTGTTGACCCGACAT 60.303 57.895 0.00 0.00 38.13 3.06
276 277 1.305930 GGGCTTGTTGACCCGACATC 61.306 60.000 0.00 0.00 38.13 3.06
277 278 1.305930 GGCTTGTTGACCCGACATCC 61.306 60.000 0.00 0.00 0.00 3.51
278 279 1.305930 GCTTGTTGACCCGACATCCC 61.306 60.000 0.00 0.00 0.00 3.85
279 280 0.324943 CTTGTTGACCCGACATCCCT 59.675 55.000 0.00 0.00 0.00 4.20
280 281 0.768622 TTGTTGACCCGACATCCCTT 59.231 50.000 0.00 0.00 0.00 3.95
281 282 0.036164 TGTTGACCCGACATCCCTTG 59.964 55.000 0.00 0.00 0.00 3.61
282 283 0.323629 GTTGACCCGACATCCCTTGA 59.676 55.000 0.00 0.00 0.00 3.02
283 284 1.060729 TTGACCCGACATCCCTTGAA 58.939 50.000 0.00 0.00 0.00 2.69
284 285 0.613260 TGACCCGACATCCCTTGAAG 59.387 55.000 0.00 0.00 0.00 3.02
285 286 0.744771 GACCCGACATCCCTTGAAGC 60.745 60.000 0.00 0.00 0.00 3.86
286 287 1.299648 CCCGACATCCCTTGAAGCA 59.700 57.895 0.00 0.00 0.00 3.91
287 288 1.026718 CCCGACATCCCTTGAAGCAC 61.027 60.000 0.00 0.00 0.00 4.40
288 289 1.361668 CCGACATCCCTTGAAGCACG 61.362 60.000 0.00 0.00 0.00 5.34
289 290 0.389817 CGACATCCCTTGAAGCACGA 60.390 55.000 0.00 0.00 0.00 4.35
290 291 1.363744 GACATCCCTTGAAGCACGAG 58.636 55.000 0.00 0.00 0.00 4.18
291 292 0.674895 ACATCCCTTGAAGCACGAGC 60.675 55.000 0.00 0.00 42.56 5.03
302 303 4.731667 CACGAGCGTGCATTGAAG 57.268 55.556 10.25 0.00 39.39 3.02
303 304 1.510623 CACGAGCGTGCATTGAAGC 60.511 57.895 10.25 0.00 39.39 3.86
304 305 1.960763 ACGAGCGTGCATTGAAGCA 60.961 52.632 0.00 0.00 43.35 3.91
325 326 4.021925 GCTCTGGCCGTGGACCTT 62.022 66.667 0.00 0.00 0.00 3.50
326 327 2.266055 CTCTGGCCGTGGACCTTC 59.734 66.667 0.00 0.00 0.00 3.46
327 328 2.525629 TCTGGCCGTGGACCTTCA 60.526 61.111 0.00 0.00 0.00 3.02
328 329 2.358737 CTGGCCGTGGACCTTCAC 60.359 66.667 0.00 0.00 0.00 3.18
329 330 2.847234 TGGCCGTGGACCTTCACT 60.847 61.111 0.00 0.00 35.63 3.41
330 331 2.397413 CTGGCCGTGGACCTTCACTT 62.397 60.000 0.00 0.00 35.63 3.16
331 332 1.966451 GGCCGTGGACCTTCACTTG 60.966 63.158 0.00 0.00 35.63 3.16
332 333 1.966451 GCCGTGGACCTTCACTTGG 60.966 63.158 0.00 0.00 35.63 3.61
333 334 1.752198 CCGTGGACCTTCACTTGGA 59.248 57.895 0.00 0.00 35.63 3.53
334 335 0.324943 CCGTGGACCTTCACTTGGAT 59.675 55.000 0.00 0.00 35.63 3.41
335 336 1.271379 CCGTGGACCTTCACTTGGATT 60.271 52.381 0.00 0.00 35.63 3.01
336 337 2.504367 CGTGGACCTTCACTTGGATTT 58.496 47.619 0.00 0.00 35.63 2.17
337 338 2.484264 CGTGGACCTTCACTTGGATTTC 59.516 50.000 0.00 0.00 35.63 2.17
338 339 3.486383 GTGGACCTTCACTTGGATTTCA 58.514 45.455 0.00 0.00 34.98 2.69
339 340 4.082125 GTGGACCTTCACTTGGATTTCAT 58.918 43.478 0.00 0.00 34.98 2.57
340 341 4.156739 GTGGACCTTCACTTGGATTTCATC 59.843 45.833 0.00 0.00 34.98 2.92
341 342 6.836178 GTGGACCTTCACTTGGATTTCATCC 61.836 48.000 0.00 0.00 40.78 3.51
349 350 2.762360 GGATTTCATCCGTGTCGCA 58.238 52.632 0.00 0.00 40.13 5.10
350 351 1.299541 GGATTTCATCCGTGTCGCAT 58.700 50.000 0.00 0.00 40.13 4.73
351 352 1.261619 GGATTTCATCCGTGTCGCATC 59.738 52.381 0.00 0.00 40.13 3.91
352 353 1.933181 GATTTCATCCGTGTCGCATCA 59.067 47.619 0.00 0.00 0.00 3.07
353 354 1.802069 TTTCATCCGTGTCGCATCAA 58.198 45.000 0.00 0.00 0.00 2.57
354 355 1.802069 TTCATCCGTGTCGCATCAAA 58.198 45.000 0.00 0.00 0.00 2.69
355 356 1.358877 TCATCCGTGTCGCATCAAAG 58.641 50.000 0.00 0.00 0.00 2.77
356 357 1.078709 CATCCGTGTCGCATCAAAGT 58.921 50.000 0.00 0.00 0.00 2.66
357 358 1.078709 ATCCGTGTCGCATCAAAGTG 58.921 50.000 0.00 0.00 0.00 3.16
358 359 0.032815 TCCGTGTCGCATCAAAGTGA 59.967 50.000 0.00 0.00 0.00 3.41
359 360 1.078709 CCGTGTCGCATCAAAGTGAT 58.921 50.000 0.00 0.00 37.65 3.06
375 376 8.400184 TCAAAGTGATGAGAAACATTGATTCT 57.600 30.769 8.74 8.74 39.56 2.40
376 377 8.294577 TCAAAGTGATGAGAAACATTGATTCTG 58.705 33.333 13.24 0.00 39.56 3.02
377 378 6.754702 AGTGATGAGAAACATTGATTCTGG 57.245 37.500 13.24 0.00 39.56 3.86
378 379 6.479006 AGTGATGAGAAACATTGATTCTGGA 58.521 36.000 13.24 1.60 39.56 3.86
379 380 6.598457 AGTGATGAGAAACATTGATTCTGGAG 59.402 38.462 13.24 0.00 39.56 3.86
380 381 5.356190 TGATGAGAAACATTGATTCTGGAGC 59.644 40.000 13.24 4.33 39.56 4.70
381 382 3.686241 TGAGAAACATTGATTCTGGAGCG 59.314 43.478 13.24 0.00 37.26 5.03
382 383 2.421424 AGAAACATTGATTCTGGAGCGC 59.579 45.455 8.24 0.00 35.85 5.92
383 384 1.098050 AACATTGATTCTGGAGCGCC 58.902 50.000 2.29 0.00 0.00 6.53
384 385 0.254178 ACATTGATTCTGGAGCGCCT 59.746 50.000 8.34 0.00 34.31 5.52
385 386 1.340405 ACATTGATTCTGGAGCGCCTT 60.340 47.619 8.34 0.00 34.31 4.35
386 387 1.065102 CATTGATTCTGGAGCGCCTTG 59.935 52.381 8.34 0.55 34.31 3.61
387 388 0.036732 TTGATTCTGGAGCGCCTTGT 59.963 50.000 8.34 0.00 34.31 3.16
388 389 0.391661 TGATTCTGGAGCGCCTTGTC 60.392 55.000 8.34 0.00 34.31 3.18
389 390 1.424493 GATTCTGGAGCGCCTTGTCG 61.424 60.000 8.34 0.00 34.31 4.35
390 391 1.888436 ATTCTGGAGCGCCTTGTCGA 61.888 55.000 8.34 0.00 34.31 4.20
391 392 1.888436 TTCTGGAGCGCCTTGTCGAT 61.888 55.000 8.34 0.00 34.31 3.59
392 393 2.125552 TGGAGCGCCTTGTCGATG 60.126 61.111 8.34 0.00 34.31 3.84
393 394 2.125512 GGAGCGCCTTGTCGATGT 60.126 61.111 2.29 0.00 0.00 3.06
394 395 2.456119 GGAGCGCCTTGTCGATGTG 61.456 63.158 2.29 0.00 0.00 3.21
395 396 1.738099 GAGCGCCTTGTCGATGTGT 60.738 57.895 2.29 0.00 0.00 3.72
396 397 1.687494 GAGCGCCTTGTCGATGTGTC 61.687 60.000 2.29 0.00 0.00 3.67
397 398 2.027073 GCGCCTTGTCGATGTGTCA 61.027 57.895 0.00 0.00 0.00 3.58
398 399 1.781555 CGCCTTGTCGATGTGTCAC 59.218 57.895 0.00 0.00 0.00 3.67
399 400 0.943835 CGCCTTGTCGATGTGTCACA 60.944 55.000 8.40 8.40 0.00 3.58
400 401 1.225855 GCCTTGTCGATGTGTCACAA 58.774 50.000 10.28 0.00 0.00 3.33
401 402 1.069906 GCCTTGTCGATGTGTCACAAC 60.070 52.381 10.28 6.45 0.00 3.32
402 403 2.483876 CCTTGTCGATGTGTCACAACT 58.516 47.619 10.28 0.00 0.00 3.16
403 404 2.476619 CCTTGTCGATGTGTCACAACTC 59.523 50.000 10.28 3.07 0.00 3.01
404 405 3.384668 CTTGTCGATGTGTCACAACTCT 58.615 45.455 10.28 0.00 0.00 3.24
405 406 2.742774 TGTCGATGTGTCACAACTCTG 58.257 47.619 10.28 1.66 0.00 3.35
406 407 1.457303 GTCGATGTGTCACAACTCTGC 59.543 52.381 10.28 0.00 0.00 4.26
407 408 0.436150 CGATGTGTCACAACTCTGCG 59.564 55.000 10.28 3.90 0.00 5.18
408 409 1.783284 GATGTGTCACAACTCTGCGA 58.217 50.000 10.28 0.00 0.00 5.10
409 410 1.723542 GATGTGTCACAACTCTGCGAG 59.276 52.381 10.28 4.36 35.52 5.03
410 411 0.744281 TGTGTCACAACTCTGCGAGA 59.256 50.000 2.31 0.00 33.32 4.04
424 425 3.794690 CGAGAGCTCAAAGACCGAA 57.205 52.632 17.77 0.00 0.00 4.30
425 426 1.623359 CGAGAGCTCAAAGACCGAAG 58.377 55.000 17.77 0.00 0.00 3.79
426 427 1.200252 CGAGAGCTCAAAGACCGAAGA 59.800 52.381 17.77 0.00 0.00 2.87
427 428 2.351835 CGAGAGCTCAAAGACCGAAGAA 60.352 50.000 17.77 0.00 0.00 2.52
428 429 3.654414 GAGAGCTCAAAGACCGAAGAAA 58.346 45.455 17.77 0.00 0.00 2.52
429 430 3.394719 AGAGCTCAAAGACCGAAGAAAC 58.605 45.455 17.77 0.00 0.00 2.78
430 431 3.131396 GAGCTCAAAGACCGAAGAAACA 58.869 45.455 9.40 0.00 0.00 2.83
431 432 3.744660 AGCTCAAAGACCGAAGAAACAT 58.255 40.909 0.00 0.00 0.00 2.71
432 433 3.499918 AGCTCAAAGACCGAAGAAACATG 59.500 43.478 0.00 0.00 0.00 3.21
433 434 3.251004 GCTCAAAGACCGAAGAAACATGT 59.749 43.478 0.00 0.00 0.00 3.21
434 435 4.261197 GCTCAAAGACCGAAGAAACATGTT 60.261 41.667 4.92 4.92 0.00 2.71
435 436 5.733373 GCTCAAAGACCGAAGAAACATGTTT 60.733 40.000 23.49 23.49 35.14 2.83
436 437 6.202516 TCAAAGACCGAAGAAACATGTTTT 57.797 33.333 24.02 10.17 32.11 2.43
437 438 6.033341 TCAAAGACCGAAGAAACATGTTTTG 58.967 36.000 24.02 14.07 32.11 2.44
438 439 5.828299 AAGACCGAAGAAACATGTTTTGA 57.172 34.783 24.02 0.00 32.11 2.69
439 440 5.424121 AGACCGAAGAAACATGTTTTGAG 57.576 39.130 24.02 15.18 32.11 3.02
440 441 5.123227 AGACCGAAGAAACATGTTTTGAGA 58.877 37.500 24.02 0.00 32.11 3.27
441 442 5.007724 AGACCGAAGAAACATGTTTTGAGAC 59.992 40.000 24.02 11.47 32.11 3.36
442 443 4.211389 CCGAAGAAACATGTTTTGAGACG 58.789 43.478 24.02 21.29 32.11 4.18
443 444 4.260620 CCGAAGAAACATGTTTTGAGACGT 60.261 41.667 24.02 9.79 32.11 4.34
444 445 4.666176 CGAAGAAACATGTTTTGAGACGTG 59.334 41.667 24.02 6.61 41.29 4.49
445 446 3.952535 AGAAACATGTTTTGAGACGTGC 58.047 40.909 24.02 8.74 39.59 5.34
446 447 3.627577 AGAAACATGTTTTGAGACGTGCT 59.372 39.130 24.02 10.78 39.59 4.40
447 448 4.096382 AGAAACATGTTTTGAGACGTGCTT 59.904 37.500 24.02 0.00 39.59 3.91
448 449 4.370364 AACATGTTTTGAGACGTGCTTT 57.630 36.364 4.92 0.00 39.59 3.51
449 450 4.370364 ACATGTTTTGAGACGTGCTTTT 57.630 36.364 0.00 0.00 39.59 2.27
450 451 4.351192 ACATGTTTTGAGACGTGCTTTTC 58.649 39.130 0.00 0.00 39.59 2.29
451 452 4.142491 ACATGTTTTGAGACGTGCTTTTCA 60.142 37.500 0.00 0.00 39.59 2.69
452 453 4.630894 TGTTTTGAGACGTGCTTTTCAT 57.369 36.364 0.00 0.00 0.00 2.57
453 454 4.992688 TGTTTTGAGACGTGCTTTTCATT 58.007 34.783 0.00 0.00 0.00 2.57
454 455 5.034152 TGTTTTGAGACGTGCTTTTCATTC 58.966 37.500 0.00 0.00 0.00 2.67
455 456 4.891627 TTTGAGACGTGCTTTTCATTCA 57.108 36.364 0.00 0.00 0.00 2.57
456 457 5.437289 TTTGAGACGTGCTTTTCATTCAT 57.563 34.783 0.00 0.00 0.00 2.57
457 458 4.408993 TGAGACGTGCTTTTCATTCATG 57.591 40.909 0.00 0.00 0.00 3.07
458 459 4.064388 TGAGACGTGCTTTTCATTCATGA 58.936 39.130 0.00 0.00 34.44 3.07
459 460 4.514816 TGAGACGTGCTTTTCATTCATGAA 59.485 37.500 11.26 11.26 44.42 2.57
460 461 5.039480 AGACGTGCTTTTCATTCATGAAG 57.961 39.130 14.54 6.44 46.34 3.02
461 462 4.083110 AGACGTGCTTTTCATTCATGAAGG 60.083 41.667 13.85 13.85 46.34 3.46
462 463 3.820467 ACGTGCTTTTCATTCATGAAGGA 59.180 39.130 18.33 18.33 46.34 3.36
463 464 4.161333 CGTGCTTTTCATTCATGAAGGAC 58.839 43.478 21.61 12.53 46.34 3.85
464 465 4.320421 CGTGCTTTTCATTCATGAAGGACA 60.320 41.667 21.61 13.32 46.34 4.02
465 466 5.620654 CGTGCTTTTCATTCATGAAGGACAT 60.621 40.000 21.61 0.00 46.34 3.06
466 467 5.803967 GTGCTTTTCATTCATGAAGGACATC 59.196 40.000 21.61 11.75 46.34 3.06
467 468 5.477637 TGCTTTTCATTCATGAAGGACATCA 59.522 36.000 21.61 13.88 46.34 3.07
468 469 6.034591 GCTTTTCATTCATGAAGGACATCAG 58.965 40.000 21.61 14.95 46.34 2.90
469 470 5.571784 TTTCATTCATGAAGGACATCAGC 57.428 39.130 21.61 0.00 46.34 4.26
470 471 4.224991 TCATTCATGAAGGACATCAGCA 57.775 40.909 18.33 0.00 37.07 4.41
471 472 4.788679 TCATTCATGAAGGACATCAGCAT 58.211 39.130 18.33 0.00 37.07 3.79
472 473 5.932455 TCATTCATGAAGGACATCAGCATA 58.068 37.500 18.33 0.00 37.07 3.14
473 474 6.358991 TCATTCATGAAGGACATCAGCATAA 58.641 36.000 18.33 0.00 37.07 1.90
474 475 7.002276 TCATTCATGAAGGACATCAGCATAAT 58.998 34.615 18.33 0.00 37.07 1.28
475 476 6.628919 TTCATGAAGGACATCAGCATAATG 57.371 37.500 3.38 0.00 37.07 1.90
476 477 5.067954 TCATGAAGGACATCAGCATAATGG 58.932 41.667 0.00 0.00 37.07 3.16
477 478 4.776435 TGAAGGACATCAGCATAATGGA 57.224 40.909 0.00 0.00 0.00 3.41
478 479 4.711399 TGAAGGACATCAGCATAATGGAG 58.289 43.478 0.00 0.00 0.00 3.86
479 480 4.409901 TGAAGGACATCAGCATAATGGAGA 59.590 41.667 0.00 0.00 0.00 3.71
480 481 4.620589 AGGACATCAGCATAATGGAGAG 57.379 45.455 0.00 0.00 0.00 3.20
481 482 3.327172 AGGACATCAGCATAATGGAGAGG 59.673 47.826 0.00 0.00 0.00 3.69
482 483 3.558746 GGACATCAGCATAATGGAGAGGG 60.559 52.174 0.00 0.00 0.00 4.30
483 484 3.051581 ACATCAGCATAATGGAGAGGGT 58.948 45.455 0.00 0.00 0.00 4.34
484 485 3.072184 ACATCAGCATAATGGAGAGGGTC 59.928 47.826 0.00 0.00 0.00 4.46
485 486 2.763039 TCAGCATAATGGAGAGGGTCA 58.237 47.619 0.00 0.00 0.00 4.02
486 487 3.321039 TCAGCATAATGGAGAGGGTCAT 58.679 45.455 0.00 0.00 0.00 3.06
487 488 4.492646 TCAGCATAATGGAGAGGGTCATA 58.507 43.478 0.00 0.00 0.00 2.15
488 489 5.096521 TCAGCATAATGGAGAGGGTCATAT 58.903 41.667 0.00 0.00 0.00 1.78
489 490 5.046087 TCAGCATAATGGAGAGGGTCATATG 60.046 44.000 0.00 0.00 0.00 1.78
490 491 3.944015 GCATAATGGAGAGGGTCATATGC 59.056 47.826 0.00 0.00 0.00 3.14
491 492 4.324099 GCATAATGGAGAGGGTCATATGCT 60.324 45.833 0.00 0.00 33.24 3.79
492 493 5.805751 GCATAATGGAGAGGGTCATATGCTT 60.806 44.000 0.00 0.00 33.24 3.91
493 494 3.784511 ATGGAGAGGGTCATATGCTTG 57.215 47.619 0.00 0.00 0.00 4.01
494 495 1.141657 TGGAGAGGGTCATATGCTTGC 59.858 52.381 0.00 0.00 0.00 4.01
495 496 1.544314 GGAGAGGGTCATATGCTTGCC 60.544 57.143 0.00 0.00 0.00 4.52
496 497 1.141657 GAGAGGGTCATATGCTTGCCA 59.858 52.381 0.00 0.00 0.00 4.92
497 498 1.565759 AGAGGGTCATATGCTTGCCAA 59.434 47.619 0.00 0.00 0.00 4.52
498 499 2.025037 AGAGGGTCATATGCTTGCCAAA 60.025 45.455 0.00 0.00 0.00 3.28
499 500 2.360165 GAGGGTCATATGCTTGCCAAAG 59.640 50.000 0.00 0.00 36.41 2.77
507 508 3.357079 CTTGCCAAAGCGCCGAGT 61.357 61.111 2.29 0.00 44.31 4.18
508 509 2.904866 TTGCCAAAGCGCCGAGTT 60.905 55.556 2.29 0.00 44.31 3.01
509 510 2.786564 CTTGCCAAAGCGCCGAGTTC 62.787 60.000 2.29 0.00 44.31 3.01
510 511 3.050275 GCCAAAGCGCCGAGTTCT 61.050 61.111 2.29 0.00 0.00 3.01
511 512 3.028366 GCCAAAGCGCCGAGTTCTC 62.028 63.158 2.29 0.00 0.00 2.87
512 513 1.374758 CCAAAGCGCCGAGTTCTCT 60.375 57.895 2.29 0.00 0.00 3.10
513 514 0.951040 CCAAAGCGCCGAGTTCTCTT 60.951 55.000 2.29 0.00 0.00 2.85
514 515 0.440371 CAAAGCGCCGAGTTCTCTTC 59.560 55.000 2.29 0.00 0.00 2.87
515 516 0.670854 AAAGCGCCGAGTTCTCTTCC 60.671 55.000 2.29 0.00 0.00 3.46
516 517 2.508586 AAGCGCCGAGTTCTCTTCCC 62.509 60.000 2.29 0.00 0.00 3.97
517 518 2.970639 CGCCGAGTTCTCTTCCCA 59.029 61.111 0.00 0.00 0.00 4.37
518 519 1.446272 CGCCGAGTTCTCTTCCCAC 60.446 63.158 0.00 0.00 0.00 4.61
519 520 1.079057 GCCGAGTTCTCTTCCCACC 60.079 63.158 0.00 0.00 0.00 4.61
520 521 1.215647 CCGAGTTCTCTTCCCACCG 59.784 63.158 0.00 0.00 0.00 4.94
521 522 1.215647 CGAGTTCTCTTCCCACCGG 59.784 63.158 0.00 0.00 0.00 5.28
522 523 1.597461 GAGTTCTCTTCCCACCGGG 59.403 63.158 6.32 0.00 46.11 5.73
523 524 2.046217 GTTCTCTTCCCACCGGGC 60.046 66.667 6.32 0.00 43.94 6.13
524 525 3.702048 TTCTCTTCCCACCGGGCG 61.702 66.667 6.32 0.00 43.94 6.13
537 538 2.124736 GGGCGCCATGTTCTGCTA 60.125 61.111 30.85 0.00 0.00 3.49
538 539 2.182842 GGGCGCCATGTTCTGCTAG 61.183 63.158 30.85 0.00 0.00 3.42
539 540 2.182842 GGCGCCATGTTCTGCTAGG 61.183 63.158 24.80 0.00 0.00 3.02
540 541 1.450312 GCGCCATGTTCTGCTAGGT 60.450 57.895 0.00 0.00 0.00 3.08
541 542 1.026718 GCGCCATGTTCTGCTAGGTT 61.027 55.000 0.00 0.00 0.00 3.50
542 543 1.009829 CGCCATGTTCTGCTAGGTTC 58.990 55.000 0.00 0.00 0.00 3.62
543 544 1.406069 CGCCATGTTCTGCTAGGTTCT 60.406 52.381 0.00 0.00 0.00 3.01
544 545 2.159099 CGCCATGTTCTGCTAGGTTCTA 60.159 50.000 0.00 0.00 0.00 2.10
545 546 3.198872 GCCATGTTCTGCTAGGTTCTAC 58.801 50.000 0.00 0.00 0.00 2.59
546 547 3.118592 GCCATGTTCTGCTAGGTTCTACT 60.119 47.826 0.00 0.00 0.00 2.57
547 548 4.688021 CCATGTTCTGCTAGGTTCTACTC 58.312 47.826 0.00 0.00 0.00 2.59
548 549 4.442192 CCATGTTCTGCTAGGTTCTACTCC 60.442 50.000 0.00 0.00 0.00 3.85
549 550 4.048970 TGTTCTGCTAGGTTCTACTCCT 57.951 45.455 0.00 0.00 38.91 3.69
550 551 3.764434 TGTTCTGCTAGGTTCTACTCCTG 59.236 47.826 0.00 0.00 36.60 3.86
551 552 4.017808 GTTCTGCTAGGTTCTACTCCTGA 58.982 47.826 0.00 0.00 36.60 3.86
552 553 4.528076 TCTGCTAGGTTCTACTCCTGAT 57.472 45.455 0.00 0.00 36.60 2.90
553 554 5.648330 TCTGCTAGGTTCTACTCCTGATA 57.352 43.478 0.00 0.00 36.60 2.15
554 555 6.207509 TCTGCTAGGTTCTACTCCTGATAT 57.792 41.667 0.00 0.00 36.60 1.63
555 556 7.331089 TCTGCTAGGTTCTACTCCTGATATA 57.669 40.000 0.00 0.00 36.60 0.86
556 557 7.756614 TCTGCTAGGTTCTACTCCTGATATAA 58.243 38.462 0.00 0.00 36.60 0.98
557 558 8.394822 TCTGCTAGGTTCTACTCCTGATATAAT 58.605 37.037 0.00 0.00 36.60 1.28
558 559 8.354711 TGCTAGGTTCTACTCCTGATATAATG 57.645 38.462 0.00 0.00 36.60 1.90
559 560 7.950684 TGCTAGGTTCTACTCCTGATATAATGT 59.049 37.037 0.00 0.00 36.60 2.71
560 561 8.247562 GCTAGGTTCTACTCCTGATATAATGTG 58.752 40.741 0.00 0.00 36.60 3.21
561 562 9.303116 CTAGGTTCTACTCCTGATATAATGTGT 57.697 37.037 0.00 0.00 36.60 3.72
563 564 9.830186 AGGTTCTACTCCTGATATAATGTGTAT 57.170 33.333 0.00 0.00 33.62 2.29
564 565 9.862371 GGTTCTACTCCTGATATAATGTGTATG 57.138 37.037 0.00 0.00 0.00 2.39
565 566 9.360093 GTTCTACTCCTGATATAATGTGTATGC 57.640 37.037 0.00 0.00 0.00 3.14
566 567 8.067751 TCTACTCCTGATATAATGTGTATGCC 57.932 38.462 0.00 0.00 0.00 4.40
567 568 5.724328 ACTCCTGATATAATGTGTATGCCG 58.276 41.667 0.00 0.00 0.00 5.69
568 569 5.480422 ACTCCTGATATAATGTGTATGCCGA 59.520 40.000 0.00 0.00 0.00 5.54
569 570 6.155221 ACTCCTGATATAATGTGTATGCCGAT 59.845 38.462 0.00 0.00 0.00 4.18
570 571 6.340522 TCCTGATATAATGTGTATGCCGATG 58.659 40.000 0.00 0.00 0.00 3.84
571 572 6.154363 TCCTGATATAATGTGTATGCCGATGA 59.846 38.462 0.00 0.00 0.00 2.92
572 573 6.818142 CCTGATATAATGTGTATGCCGATGAA 59.182 38.462 0.00 0.00 0.00 2.57
573 574 7.496920 CCTGATATAATGTGTATGCCGATGAAT 59.503 37.037 0.00 0.00 0.00 2.57
574 575 9.533253 CTGATATAATGTGTATGCCGATGAATA 57.467 33.333 0.00 0.00 0.00 1.75
578 579 8.791327 ATAATGTGTATGCCGATGAATATTGA 57.209 30.769 0.00 0.00 0.00 2.57
579 580 7.509141 AATGTGTATGCCGATGAATATTGAA 57.491 32.000 0.00 0.00 0.00 2.69
580 581 6.934048 TGTGTATGCCGATGAATATTGAAA 57.066 33.333 0.00 0.00 0.00 2.69
581 582 7.326968 TGTGTATGCCGATGAATATTGAAAA 57.673 32.000 0.00 0.00 0.00 2.29
582 583 7.766283 TGTGTATGCCGATGAATATTGAAAAA 58.234 30.769 0.00 0.00 0.00 1.94
599 600 2.907458 AAAACTTGGAGGAGGATGGG 57.093 50.000 0.00 0.00 0.00 4.00
600 601 0.332972 AAACTTGGAGGAGGATGGGC 59.667 55.000 0.00 0.00 0.00 5.36
601 602 0.846427 AACTTGGAGGAGGATGGGCA 60.846 55.000 0.00 0.00 0.00 5.36
602 603 1.225704 CTTGGAGGAGGATGGGCAC 59.774 63.158 0.00 0.00 0.00 5.01
603 604 2.599645 CTTGGAGGAGGATGGGCACG 62.600 65.000 0.00 0.00 0.00 5.34
604 605 2.764128 GGAGGAGGATGGGCACGA 60.764 66.667 0.00 0.00 0.00 4.35
605 606 2.801631 GGAGGAGGATGGGCACGAG 61.802 68.421 0.00 0.00 0.00 4.18
606 607 1.758514 GAGGAGGATGGGCACGAGA 60.759 63.158 0.00 0.00 0.00 4.04
607 608 2.022240 GAGGAGGATGGGCACGAGAC 62.022 65.000 0.00 0.00 0.00 3.36
608 609 2.359169 GGAGGATGGGCACGAGACA 61.359 63.158 0.00 0.00 0.00 3.41
609 610 1.596934 GAGGATGGGCACGAGACAA 59.403 57.895 0.00 0.00 0.00 3.18
610 611 0.036388 GAGGATGGGCACGAGACAAA 60.036 55.000 0.00 0.00 0.00 2.83
611 612 0.400213 AGGATGGGCACGAGACAAAA 59.600 50.000 0.00 0.00 0.00 2.44
612 613 1.202879 AGGATGGGCACGAGACAAAAA 60.203 47.619 0.00 0.00 0.00 1.94
696 697 2.656651 CTCGATGCCGCCTTCTCG 60.657 66.667 0.00 0.00 35.37 4.04
840 843 2.507102 AAGTGCGGATCGTGCGAG 60.507 61.111 0.00 0.00 30.86 5.03
882 885 2.824041 CCGCTAATTGCCGGCAGT 60.824 61.111 30.75 25.57 38.78 4.40
883 886 2.406616 CCGCTAATTGCCGGCAGTT 61.407 57.895 35.18 35.18 38.78 3.16
884 887 1.226379 CGCTAATTGCCGGCAGTTG 60.226 57.895 38.42 29.04 38.78 3.16
885 888 1.517039 GCTAATTGCCGGCAGTTGC 60.517 57.895 38.42 32.94 36.53 4.17
886 889 1.937546 GCTAATTGCCGGCAGTTGCT 61.938 55.000 38.42 21.32 37.13 3.91
887 890 1.378531 CTAATTGCCGGCAGTTGCTA 58.621 50.000 38.42 22.80 41.70 3.49
888 891 1.742831 CTAATTGCCGGCAGTTGCTAA 59.257 47.619 38.42 22.47 41.70 3.09
889 892 0.243636 AATTGCCGGCAGTTGCTAAC 59.756 50.000 33.33 0.00 41.70 2.34
890 893 0.893270 ATTGCCGGCAGTTGCTAACA 60.893 50.000 30.75 12.17 41.70 2.41
891 894 1.791103 TTGCCGGCAGTTGCTAACAC 61.791 55.000 30.75 0.00 41.70 3.32
892 895 2.258013 GCCGGCAGTTGCTAACACA 61.258 57.895 24.80 0.00 41.70 3.72
893 896 1.574428 CCGGCAGTTGCTAACACAC 59.426 57.895 3.88 0.00 41.70 3.82
894 897 1.163420 CCGGCAGTTGCTAACACACA 61.163 55.000 3.88 0.00 41.70 3.72
895 898 0.235665 CGGCAGTTGCTAACACACAG 59.764 55.000 3.88 0.00 41.70 3.66
896 899 0.040067 GGCAGTTGCTAACACACAGC 60.040 55.000 3.88 0.00 41.70 4.40
897 900 0.384725 GCAGTTGCTAACACACAGCG 60.385 55.000 0.00 0.00 42.13 5.18
898 901 0.937304 CAGTTGCTAACACACAGCGT 59.063 50.000 0.00 0.00 42.13 5.07
899 902 2.131972 CAGTTGCTAACACACAGCGTA 58.868 47.619 0.00 0.00 42.13 4.42
900 903 2.096909 CAGTTGCTAACACACAGCGTAC 60.097 50.000 0.00 0.00 42.13 3.67
901 904 1.133407 TTGCTAACACACAGCGTACG 58.867 50.000 11.84 11.84 42.13 3.67
932 956 0.817634 TGTCCAAGGCGGTTCAGTTG 60.818 55.000 0.00 0.00 35.57 3.16
1652 1734 3.869272 GATCAGCAGCAACCGCCG 61.869 66.667 0.00 0.00 39.83 6.46
1676 1759 1.135859 CATTCCTCTGTTCTTGTGCGC 60.136 52.381 0.00 0.00 0.00 6.09
1684 1767 2.543848 CTGTTCTTGTGCGCTTAACTGA 59.456 45.455 9.73 0.00 0.00 3.41
1694 1777 3.755905 TGCGCTTAACTGATTGAATTCCA 59.244 39.130 9.73 0.00 0.00 3.53
1806 1889 1.668151 GTGTCTGGTGCCGAGGAAC 60.668 63.158 0.00 0.00 0.00 3.62
1880 1963 0.471211 AGAGACCTCACCCGGTTCAA 60.471 55.000 0.00 0.00 37.42 2.69
2000 2085 3.033764 CACGGTGGGTCGTTGTCG 61.034 66.667 0.00 0.00 41.86 4.35
2049 2153 4.976925 CCGCCGCTGCTATCCCTG 62.977 72.222 0.00 0.00 34.43 4.45
2051 2155 2.590007 GCCGCTGCTATCCCTGTG 60.590 66.667 0.00 0.00 33.53 3.66
2078 2197 6.455360 TTTTGGTTCTGATAAGATGCATCC 57.545 37.500 23.06 8.35 0.00 3.51
2100 2219 3.518634 TGTGTGTGCATAGCTAATCGA 57.481 42.857 0.00 0.00 0.00 3.59
2182 2305 0.668096 TAACACCGCATGACACCGTC 60.668 55.000 0.00 0.00 0.00 4.79
2183 2306 2.048222 CACCGCATGACACCGTCT 60.048 61.111 0.00 0.00 33.15 4.18
2194 2317 2.022129 CACCGTCTGAACACCGCTC 61.022 63.158 0.00 0.00 0.00 5.03
2206 2329 2.073816 ACACCGCTCGATTTTGTAAGG 58.926 47.619 0.00 0.00 0.00 2.69
2301 2424 9.438291 CAAATATATTTTGTGATGTCGTTCTCC 57.562 33.333 8.01 0.00 0.00 3.71
2345 2468 8.796475 CAATTTAGATAGAGGAGAGAGAAGGAG 58.204 40.741 0.00 0.00 0.00 3.69
2346 2469 6.448369 TTAGATAGAGGAGAGAGAAGGAGG 57.552 45.833 0.00 0.00 0.00 4.30
2347 2470 3.657727 AGATAGAGGAGAGAGAAGGAGGG 59.342 52.174 0.00 0.00 0.00 4.30
2358 2481 0.960861 GAAGGAGGGCCGAAAACCAG 60.961 60.000 0.00 0.00 39.96 4.00
2365 2493 4.038080 CCGAAAACCAGCGCACCC 62.038 66.667 11.47 0.00 0.00 4.61
2375 2503 2.254350 GCGCACCCGGTTTCTTTC 59.746 61.111 0.30 0.00 34.32 2.62
2379 2507 0.826256 GCACCCGGTTTCTTTCCCTT 60.826 55.000 0.00 0.00 0.00 3.95
2380 2508 0.958822 CACCCGGTTTCTTTCCCTTG 59.041 55.000 0.00 0.00 0.00 3.61
2487 2620 0.962356 ATGACTTTGGCTCGGGCTTG 60.962 55.000 7.48 0.00 38.73 4.01
2507 2640 5.394333 GCTTGGTCGAGTAAGTTTCCTCTAT 60.394 44.000 9.55 0.00 0.00 1.98
2561 2694 5.131142 CACCTATTGGAGTGTCCTTAGGATT 59.869 44.000 20.54 0.00 41.56 3.01
2571 2704 2.026262 GTCCTTAGGATTTGTGCAGGGA 60.026 50.000 3.52 0.00 32.73 4.20
2579 2712 1.851021 TTTGTGCAGGGACATTCGCG 61.851 55.000 0.00 0.00 34.19 5.87
2585 2718 1.156736 CAGGGACATTCGCGTCTTTT 58.843 50.000 5.77 0.00 36.12 2.27
2591 2724 3.359654 GACATTCGCGTCTTTTTGTTGT 58.640 40.909 5.77 0.00 32.92 3.32
2611 2744 3.375239 TACTAGTGGCCGCACGCA 61.375 61.111 20.59 0.00 40.31 5.24
2621 2754 1.741401 CCGCACGCATCTTCCTTGA 60.741 57.895 0.00 0.00 0.00 3.02
2655 2790 7.013559 TGGCTATGATTGGATCTTAACATGTTG 59.986 37.037 21.42 5.44 0.00 3.33
2703 2838 2.034179 TCTTCGTCTTCGTGCTCTTTGA 59.966 45.455 0.00 0.00 38.33 2.69
2745 2883 5.568620 AGTGGAGTCAATAGTGGAAGTTT 57.431 39.130 0.00 0.00 0.00 2.66
2748 2886 5.179555 GTGGAGTCAATAGTGGAAGTTTGAC 59.820 44.000 6.55 6.55 45.18 3.18
2749 2887 5.163248 TGGAGTCAATAGTGGAAGTTTGACA 60.163 40.000 14.79 0.00 46.51 3.58
2750 2888 5.179555 GGAGTCAATAGTGGAAGTTTGACAC 59.820 44.000 14.79 9.54 46.51 3.67
2753 2891 7.506114 AGTCAATAGTGGAAGTTTGACACTTA 58.494 34.615 14.79 2.87 46.53 2.24
2754 2892 7.657761 AGTCAATAGTGGAAGTTTGACACTTAG 59.342 37.037 14.79 5.60 46.53 2.18
2780 3610 1.207089 GAGTTGACGTCCCATCATCCA 59.793 52.381 14.12 0.00 0.00 3.41
2794 3624 1.202203 CATCCATTTTTGCGGCATCG 58.798 50.000 2.28 0.00 39.81 3.84
2795 3625 1.102154 ATCCATTTTTGCGGCATCGA 58.898 45.000 2.28 0.00 39.00 3.59
2798 3628 0.179202 CATTTTTGCGGCATCGACGA 60.179 50.000 2.28 0.00 35.20 4.20
2825 3655 0.552848 GCATCCTTTCCTCCCCATGA 59.447 55.000 0.00 0.00 0.00 3.07
2826 3656 1.063717 GCATCCTTTCCTCCCCATGAA 60.064 52.381 0.00 0.00 0.00 2.57
2829 3659 1.063717 TCCTTTCCTCCCCATGAATGC 60.064 52.381 0.00 0.00 0.00 3.56
2832 3662 1.009997 TTCCTCCCCATGAATGCCTT 58.990 50.000 0.00 0.00 0.00 4.35
2837 3667 3.484407 CTCCCCATGAATGCCTTTCTAG 58.516 50.000 0.00 0.00 35.23 2.43
2852 3682 4.946157 CCTTTCTAGTGCATCAGGTCATTT 59.054 41.667 0.00 0.00 0.00 2.32
2855 3685 6.500684 TTCTAGTGCATCAGGTCATTTTTC 57.499 37.500 0.00 0.00 0.00 2.29
2856 3686 3.837213 AGTGCATCAGGTCATTTTTCG 57.163 42.857 0.00 0.00 0.00 3.46
2857 3687 3.149196 AGTGCATCAGGTCATTTTTCGT 58.851 40.909 0.00 0.00 0.00 3.85
2858 3688 3.058016 AGTGCATCAGGTCATTTTTCGTG 60.058 43.478 0.00 0.00 0.00 4.35
2859 3689 2.253603 GCATCAGGTCATTTTTCGTGC 58.746 47.619 0.00 0.00 0.00 5.34
2862 3692 3.896648 TCAGGTCATTTTTCGTGCTTC 57.103 42.857 0.00 0.00 0.00 3.86
2863 3693 3.210227 TCAGGTCATTTTTCGTGCTTCA 58.790 40.909 0.00 0.00 0.00 3.02
2876 3707 2.683465 GCTTCATGCTCCTCCCCCA 61.683 63.158 0.00 0.00 38.95 4.96
2879 3710 0.327867 TTCATGCTCCTCCCCCATCT 60.328 55.000 0.00 0.00 0.00 2.90
2904 3735 0.531311 GTGTCCCCTTCGTCGTTGTT 60.531 55.000 0.00 0.00 0.00 2.83
2910 3741 1.292061 CCTTCGTCGTTGTTGTGGAA 58.708 50.000 0.00 0.00 0.00 3.53
2917 3748 0.309302 CGTTGTTGTGGAATTGGCGA 59.691 50.000 0.00 0.00 0.00 5.54
2929 3760 3.490078 GGAATTGGCGAAAGTTGTGTTCA 60.490 43.478 0.00 0.00 0.00 3.18
2933 3764 1.264288 GGCGAAAGTTGTGTTCAGGAG 59.736 52.381 0.00 0.00 0.00 3.69
2937 3768 1.680338 AAGTTGTGTTCAGGAGGTGC 58.320 50.000 0.00 0.00 0.00 5.01
2948 3779 2.237143 TCAGGAGGTGCTTCTACATTGG 59.763 50.000 0.00 0.00 0.00 3.16
2949 3780 2.026822 CAGGAGGTGCTTCTACATTGGT 60.027 50.000 0.00 0.00 0.00 3.67
2950 3781 2.644798 AGGAGGTGCTTCTACATTGGTT 59.355 45.455 0.00 0.00 0.00 3.67
2952 3783 4.288626 AGGAGGTGCTTCTACATTGGTTTA 59.711 41.667 0.00 0.00 0.00 2.01
2954 3785 5.297029 GGAGGTGCTTCTACATTGGTTTATC 59.703 44.000 0.00 0.00 0.00 1.75
2955 3786 5.193679 AGGTGCTTCTACATTGGTTTATCC 58.806 41.667 0.00 0.00 0.00 2.59
2957 3788 4.634443 GTGCTTCTACATTGGTTTATCCGT 59.366 41.667 0.00 0.00 39.52 4.69
2958 3789 4.634004 TGCTTCTACATTGGTTTATCCGTG 59.366 41.667 0.00 0.00 39.52 4.94
2962 3793 5.189928 TCTACATTGGTTTATCCGTGCATT 58.810 37.500 0.00 0.00 39.52 3.56
2963 3794 6.350103 TCTACATTGGTTTATCCGTGCATTA 58.650 36.000 0.00 0.00 39.52 1.90
2964 3795 5.499139 ACATTGGTTTATCCGTGCATTAG 57.501 39.130 0.00 0.00 39.52 1.73
2965 3796 4.202010 ACATTGGTTTATCCGTGCATTAGC 60.202 41.667 0.00 0.00 39.52 3.09
2966 3797 2.992593 TGGTTTATCCGTGCATTAGCA 58.007 42.857 0.00 0.00 43.86 3.49
2979 3810 4.558538 GCATTAGCATGGTAACTTCCTG 57.441 45.455 19.03 13.75 41.58 3.86
2980 3811 4.199310 GCATTAGCATGGTAACTTCCTGA 58.801 43.478 19.03 0.00 41.58 3.86
2982 3813 5.300286 GCATTAGCATGGTAACTTCCTGATT 59.700 40.000 19.03 0.00 41.58 2.57
2983 3814 6.732154 CATTAGCATGGTAACTTCCTGATTG 58.268 40.000 19.03 7.05 37.61 2.67
2984 3815 3.019564 AGCATGGTAACTTCCTGATTGC 58.980 45.455 0.00 0.00 37.61 3.56
2986 3817 3.181493 GCATGGTAACTTCCTGATTGCAG 60.181 47.826 0.00 0.00 38.75 4.41
3008 5074 0.250727 TACACTGCAAGGTTGGCTCC 60.251 55.000 0.00 0.00 39.30 4.70
3029 5095 1.067000 TGCAATGGAAAATCAAGCGGG 60.067 47.619 0.00 0.00 0.00 6.13
3031 5097 0.173255 AATGGAAAATCAAGCGGGCG 59.827 50.000 0.00 0.00 0.00 6.13
3078 5146 9.687210 GAGATAACGGTTGGAAAATTAACTTTT 57.313 29.630 3.07 0.00 39.78 2.27
3095 5163 2.394930 TTTTTCAGCGATCGATGGGA 57.605 45.000 30.74 18.14 31.68 4.37
3096 5164 2.394930 TTTTCAGCGATCGATGGGAA 57.605 45.000 30.74 22.34 31.68 3.97
3097 5165 2.394930 TTTCAGCGATCGATGGGAAA 57.605 45.000 30.74 21.80 31.68 3.13
3098 5166 1.939974 TTCAGCGATCGATGGGAAAG 58.060 50.000 30.74 6.66 31.68 2.62
3099 5167 0.824109 TCAGCGATCGATGGGAAAGT 59.176 50.000 30.74 0.00 31.68 2.66
3100 5168 1.207089 TCAGCGATCGATGGGAAAGTT 59.793 47.619 30.74 0.00 31.68 2.66
3101 5169 2.429250 TCAGCGATCGATGGGAAAGTTA 59.571 45.455 30.74 8.24 31.68 2.24
3102 5170 3.118920 TCAGCGATCGATGGGAAAGTTAA 60.119 43.478 30.74 7.50 31.68 2.01
3103 5171 3.809832 CAGCGATCGATGGGAAAGTTAAT 59.190 43.478 25.04 0.00 0.00 1.40
3104 5172 4.273480 CAGCGATCGATGGGAAAGTTAATT 59.727 41.667 25.04 0.00 0.00 1.40
3105 5173 5.465390 CAGCGATCGATGGGAAAGTTAATTA 59.535 40.000 25.04 0.00 0.00 1.40
3106 5174 6.147821 CAGCGATCGATGGGAAAGTTAATTAT 59.852 38.462 25.04 0.00 0.00 1.28
3107 5175 6.710744 AGCGATCGATGGGAAAGTTAATTATT 59.289 34.615 21.57 0.00 0.00 1.40
3108 5176 7.228706 AGCGATCGATGGGAAAGTTAATTATTT 59.771 33.333 21.57 0.00 0.00 1.40
3109 5177 8.500773 GCGATCGATGGGAAAGTTAATTATTTA 58.499 33.333 21.57 0.00 0.00 1.40
3129 5197 5.789710 TTATTTTTCGAGCTACGGGAAAG 57.210 39.130 5.87 0.00 42.82 2.62
3134 5202 4.460948 TTCGAGCTACGGGAAAGTTAAT 57.539 40.909 5.87 0.00 42.82 1.40
3138 5206 6.576185 TCGAGCTACGGGAAAGTTAATTAAT 58.424 36.000 0.31 0.00 42.82 1.40
3156 5230 9.661563 TTAATTAATACAGGCCCAGATTATACG 57.338 33.333 0.00 0.00 0.00 3.06
3170 5244 1.941377 TATACGATGGGCCGGGTTAT 58.059 50.000 2.18 0.00 0.00 1.89
3211 5285 2.277756 CGCCGTCGCTAGTACCAC 60.278 66.667 0.00 0.00 0.00 4.16
3212 5286 2.103736 GCCGTCGCTAGTACCACC 59.896 66.667 0.00 0.00 0.00 4.61
3227 5302 1.228124 CACCAGGAGGGAACGCAAA 60.228 57.895 0.00 0.00 41.15 3.68
3228 5303 0.821711 CACCAGGAGGGAACGCAAAA 60.822 55.000 0.00 0.00 41.15 2.44
3229 5304 0.106419 ACCAGGAGGGAACGCAAAAA 60.106 50.000 0.00 0.00 41.15 1.94
3286 5361 3.151710 TCCCCCGTTCGATGCGAT 61.152 61.111 10.81 0.00 35.23 4.58
3287 5362 2.967076 CCCCCGTTCGATGCGATG 60.967 66.667 10.81 2.98 35.23 3.84
3288 5363 3.640000 CCCCGTTCGATGCGATGC 61.640 66.667 10.81 0.00 35.23 3.91
3289 5364 3.988385 CCCGTTCGATGCGATGCG 61.988 66.667 10.81 0.00 35.23 4.73
3290 5365 2.954346 CCGTTCGATGCGATGCGA 60.954 61.111 10.81 0.00 37.01 5.10
3291 5366 2.536619 CGTTCGATGCGATGCGAG 59.463 61.111 4.18 0.00 37.01 5.03
3292 5367 2.243810 GTTCGATGCGATGCGAGC 59.756 61.111 0.00 0.00 37.85 5.03
3293 5368 2.104928 TTCGATGCGATGCGAGCT 59.895 55.556 0.00 0.00 37.85 4.09
3294 5369 0.934901 GTTCGATGCGATGCGAGCTA 60.935 55.000 0.00 0.00 37.85 3.32
3295 5370 0.661483 TTCGATGCGATGCGAGCTAG 60.661 55.000 0.00 0.00 37.85 3.42
3296 5371 2.085262 CGATGCGATGCGAGCTAGG 61.085 63.158 0.00 0.00 35.28 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.354188 CACGACTGGCGACGAACA 60.354 61.111 11.23 0.00 44.57 3.18
4 5 2.354188 CAACACGACTGGCGACGA 60.354 61.111 11.23 0.00 44.57 4.20
5 6 4.059459 GCAACACGACTGGCGACG 62.059 66.667 11.23 2.15 44.57 5.12
6 7 1.372499 TAGCAACACGACTGGCGAC 60.372 57.895 11.23 0.00 44.57 5.19
9 10 1.344942 CGAGTAGCAACACGACTGGC 61.345 60.000 0.00 0.00 41.51 4.85
10 11 0.240145 TCGAGTAGCAACACGACTGG 59.760 55.000 0.00 0.00 42.56 4.00
11 12 1.607713 CTCGAGTAGCAACACGACTG 58.392 55.000 3.62 0.00 42.56 3.51
22 23 1.299468 GGATGGCGTGCTCGAGTAG 60.299 63.158 15.13 6.92 39.71 2.57
23 24 2.782222 GGGATGGCGTGCTCGAGTA 61.782 63.158 15.13 6.73 39.71 2.59
24 25 4.148825 GGGATGGCGTGCTCGAGT 62.149 66.667 15.13 0.00 39.71 4.18
35 36 2.045340 AGAAAACCGCCGGGATGG 60.045 61.111 8.57 0.30 42.50 3.51
36 37 0.748005 ATCAGAAAACCGCCGGGATG 60.748 55.000 8.57 0.00 36.97 3.51
37 38 0.748005 CATCAGAAAACCGCCGGGAT 60.748 55.000 8.57 0.00 36.97 3.85
38 39 1.376683 CATCAGAAAACCGCCGGGA 60.377 57.895 8.57 0.00 36.97 5.14
39 40 1.369091 CTCATCAGAAAACCGCCGGG 61.369 60.000 8.57 0.00 40.11 5.73
40 41 1.982073 GCTCATCAGAAAACCGCCGG 61.982 60.000 0.00 0.00 0.00 6.13
41 42 1.021390 AGCTCATCAGAAAACCGCCG 61.021 55.000 0.00 0.00 0.00 6.46
42 43 0.729690 GAGCTCATCAGAAAACCGCC 59.270 55.000 9.40 0.00 0.00 6.13
43 44 0.371645 CGAGCTCATCAGAAAACCGC 59.628 55.000 15.40 0.00 0.00 5.68
44 45 1.391485 CACGAGCTCATCAGAAAACCG 59.609 52.381 15.40 0.00 0.00 4.44
45 46 1.734465 CCACGAGCTCATCAGAAAACC 59.266 52.381 15.40 0.00 0.00 3.27
46 47 1.129437 GCCACGAGCTCATCAGAAAAC 59.871 52.381 15.40 0.00 38.99 2.43
47 48 1.442769 GCCACGAGCTCATCAGAAAA 58.557 50.000 15.40 0.00 38.99 2.29
48 49 0.391661 GGCCACGAGCTCATCAGAAA 60.392 55.000 15.40 0.00 43.05 2.52
49 50 1.219124 GGCCACGAGCTCATCAGAA 59.781 57.895 15.40 0.00 43.05 3.02
50 51 2.895680 GGCCACGAGCTCATCAGA 59.104 61.111 15.40 0.00 43.05 3.27
51 52 2.584418 CGGCCACGAGCTCATCAG 60.584 66.667 15.40 0.00 44.60 2.90
52 53 4.819761 GCGGCCACGAGCTCATCA 62.820 66.667 15.40 0.00 44.60 3.07
104 105 4.351938 TTCTGTCACGACCCCGCG 62.352 66.667 0.00 0.00 39.95 6.46
105 106 2.737376 GTTCTGTCACGACCCCGC 60.737 66.667 0.00 0.00 39.95 6.13
106 107 2.048503 GGTTCTGTCACGACCCCG 60.049 66.667 0.00 0.00 42.50 5.73
107 108 2.048503 CGGTTCTGTCACGACCCC 60.049 66.667 0.00 0.00 0.00 4.95
108 109 2.048503 CCGGTTCTGTCACGACCC 60.049 66.667 0.00 0.00 0.00 4.46
109 110 1.663702 CACCGGTTCTGTCACGACC 60.664 63.158 2.97 0.00 0.00 4.79
110 111 1.066918 ACACCGGTTCTGTCACGAC 59.933 57.895 2.97 0.00 0.00 4.34
111 112 1.066752 CACACCGGTTCTGTCACGA 59.933 57.895 2.97 0.00 0.00 4.35
112 113 2.594962 GCACACCGGTTCTGTCACG 61.595 63.158 2.97 0.00 0.00 4.35
113 114 1.498865 CTGCACACCGGTTCTGTCAC 61.499 60.000 2.97 0.00 0.00 3.67
114 115 1.227527 CTGCACACCGGTTCTGTCA 60.228 57.895 2.97 5.28 0.00 3.58
115 116 2.607892 GCTGCACACCGGTTCTGTC 61.608 63.158 2.97 0.54 0.00 3.51
116 117 2.591715 GCTGCACACCGGTTCTGT 60.592 61.111 2.97 0.00 0.00 3.41
117 118 2.281070 AGCTGCACACCGGTTCTG 60.281 61.111 2.97 4.16 0.00 3.02
118 119 2.031163 GAGCTGCACACCGGTTCT 59.969 61.111 2.97 0.00 0.00 3.01
119 120 2.280797 TGAGCTGCACACCGGTTC 60.281 61.111 2.97 0.00 0.00 3.62
120 121 2.281070 CTGAGCTGCACACCGGTT 60.281 61.111 2.97 0.00 0.00 4.44
121 122 4.320456 CCTGAGCTGCACACCGGT 62.320 66.667 0.00 0.00 0.00 5.28
122 123 3.947132 CTCCTGAGCTGCACACCGG 62.947 68.421 0.00 0.00 0.00 5.28
123 124 2.433838 CTCCTGAGCTGCACACCG 60.434 66.667 1.02 0.00 0.00 4.94
124 125 2.046507 CCTCCTGAGCTGCACACC 60.047 66.667 1.02 0.00 0.00 4.16
125 126 2.745492 GCCTCCTGAGCTGCACAC 60.745 66.667 1.02 0.00 0.00 3.82
126 127 4.025858 GGCCTCCTGAGCTGCACA 62.026 66.667 1.02 0.00 0.00 4.57
143 144 3.737172 CTCTTGCAAACCGCCCCG 61.737 66.667 0.00 0.00 41.33 5.73
144 145 3.373565 CCTCTTGCAAACCGCCCC 61.374 66.667 0.00 0.00 41.33 5.80
145 146 3.373565 CCCTCTTGCAAACCGCCC 61.374 66.667 0.00 0.00 41.33 6.13
146 147 2.282180 TCCCTCTTGCAAACCGCC 60.282 61.111 0.00 0.00 41.33 6.13
147 148 2.982744 GCTCCCTCTTGCAAACCGC 61.983 63.158 0.00 0.00 42.89 5.68
148 149 1.580845 CTGCTCCCTCTTGCAAACCG 61.581 60.000 0.00 0.00 38.81 4.44
149 150 1.246737 CCTGCTCCCTCTTGCAAACC 61.247 60.000 0.00 0.00 38.81 3.27
150 151 0.538287 ACCTGCTCCCTCTTGCAAAC 60.538 55.000 0.00 0.00 38.81 2.93
151 152 0.538057 CACCTGCTCCCTCTTGCAAA 60.538 55.000 0.00 0.00 38.81 3.68
152 153 1.073722 CACCTGCTCCCTCTTGCAA 59.926 57.895 0.00 0.00 38.81 4.08
153 154 2.149383 ACACCTGCTCCCTCTTGCA 61.149 57.895 0.00 0.00 37.63 4.08
154 155 1.673665 CACACCTGCTCCCTCTTGC 60.674 63.158 0.00 0.00 0.00 4.01
155 156 1.002868 CCACACCTGCTCCCTCTTG 60.003 63.158 0.00 0.00 0.00 3.02
156 157 1.152030 TCCACACCTGCTCCCTCTT 60.152 57.895 0.00 0.00 0.00 2.85
157 158 1.611851 CTCCACACCTGCTCCCTCT 60.612 63.158 0.00 0.00 0.00 3.69
158 159 1.610673 TCTCCACACCTGCTCCCTC 60.611 63.158 0.00 0.00 0.00 4.30
159 160 1.915769 GTCTCCACACCTGCTCCCT 60.916 63.158 0.00 0.00 0.00 4.20
160 161 2.665603 GTCTCCACACCTGCTCCC 59.334 66.667 0.00 0.00 0.00 4.30
161 162 2.665603 GGTCTCCACACCTGCTCC 59.334 66.667 0.00 0.00 33.08 4.70
162 163 2.665603 GGGTCTCCACACCTGCTC 59.334 66.667 0.00 0.00 36.57 4.26
163 164 2.930562 GGGGTCTCCACACCTGCT 60.931 66.667 0.00 0.00 43.85 4.24
164 165 4.394712 CGGGGTCTCCACACCTGC 62.395 72.222 0.00 0.00 45.28 4.85
165 166 2.172483 CTTCGGGGTCTCCACACCTG 62.172 65.000 0.00 0.00 45.28 4.00
166 167 1.913762 CTTCGGGGTCTCCACACCT 60.914 63.158 0.00 0.00 45.28 4.00
167 168 2.663196 CTTCGGGGTCTCCACACC 59.337 66.667 0.00 0.00 43.76 4.16
168 169 2.663196 CCTTCGGGGTCTCCACAC 59.337 66.667 0.00 0.00 34.36 3.82
169 170 3.319198 GCCTTCGGGGTCTCCACA 61.319 66.667 0.00 0.00 37.43 4.17
170 171 3.003763 AGCCTTCGGGGTCTCCAC 61.004 66.667 0.00 0.00 43.06 4.02
189 190 2.556287 CCGCAAGCGTCAAAGGAC 59.444 61.111 13.80 0.00 40.77 3.85
190 191 2.668212 CCCGCAAGCGTCAAAGGA 60.668 61.111 13.80 0.00 37.81 3.36
191 192 4.404654 GCCCGCAAGCGTCAAAGG 62.405 66.667 13.80 7.92 37.81 3.11
192 193 2.786564 GAAGCCCGCAAGCGTCAAAG 62.787 60.000 13.80 0.00 40.46 2.77
193 194 2.903547 GAAGCCCGCAAGCGTCAAA 61.904 57.895 13.80 0.00 40.46 2.69
194 195 3.353836 GAAGCCCGCAAGCGTCAA 61.354 61.111 13.80 0.00 40.46 3.18
195 196 4.617520 TGAAGCCCGCAAGCGTCA 62.618 61.111 13.80 9.07 46.73 4.35
196 197 2.200170 ATTTGAAGCCCGCAAGCGTC 62.200 55.000 13.80 4.86 41.04 5.19
197 198 0.958382 TATTTGAAGCCCGCAAGCGT 60.958 50.000 13.80 0.00 38.01 5.07
198 199 0.248215 CTATTTGAAGCCCGCAAGCG 60.248 55.000 7.60 7.60 38.01 4.68
199 200 0.101219 CCTATTTGAAGCCCGCAAGC 59.899 55.000 0.00 0.00 0.00 4.01
200 201 1.750193 TCCTATTTGAAGCCCGCAAG 58.250 50.000 0.00 0.00 0.00 4.01
201 202 2.297701 GATCCTATTTGAAGCCCGCAA 58.702 47.619 0.00 0.00 0.00 4.85
202 203 1.476833 GGATCCTATTTGAAGCCCGCA 60.477 52.381 3.84 0.00 0.00 5.69
203 204 1.239347 GGATCCTATTTGAAGCCCGC 58.761 55.000 3.84 0.00 0.00 6.13
204 205 1.878102 CGGGATCCTATTTGAAGCCCG 60.878 57.143 12.58 0.00 44.49 6.13
205 206 1.897560 CGGGATCCTATTTGAAGCCC 58.102 55.000 12.58 0.00 32.45 5.19
206 207 1.239347 GCGGGATCCTATTTGAAGCC 58.761 55.000 12.58 0.00 0.00 4.35
207 208 1.967319 TGCGGGATCCTATTTGAAGC 58.033 50.000 12.58 5.54 0.00 3.86
208 209 6.484643 CCATATATGCGGGATCCTATTTGAAG 59.515 42.308 12.58 0.00 0.00 3.02
209 210 6.356556 CCATATATGCGGGATCCTATTTGAA 58.643 40.000 12.58 0.00 0.00 2.69
210 211 5.163205 CCCATATATGCGGGATCCTATTTGA 60.163 44.000 12.58 0.00 46.34 2.69
211 212 5.065914 CCCATATATGCGGGATCCTATTTG 58.934 45.833 12.58 6.91 46.34 2.32
212 213 4.446311 GCCCATATATGCGGGATCCTATTT 60.446 45.833 12.58 2.56 46.34 1.40
213 214 3.073062 GCCCATATATGCGGGATCCTATT 59.927 47.826 12.58 0.00 46.34 1.73
214 215 2.639839 GCCCATATATGCGGGATCCTAT 59.360 50.000 12.58 4.09 46.34 2.57
215 216 2.047061 GCCCATATATGCGGGATCCTA 58.953 52.381 12.58 0.00 46.34 2.94
216 217 0.839946 GCCCATATATGCGGGATCCT 59.160 55.000 12.58 0.00 46.34 3.24
217 218 0.532862 CGCCCATATATGCGGGATCC 60.533 60.000 14.03 1.92 46.34 3.36
218 219 2.992089 CGCCCATATATGCGGGATC 58.008 57.895 14.03 0.00 46.34 3.36
224 225 1.026718 GTGGAGGCGCCCATATATGC 61.027 60.000 26.15 9.57 38.66 3.14
225 226 0.615331 AGTGGAGGCGCCCATATATG 59.385 55.000 26.15 5.68 38.66 1.78
226 227 0.615331 CAGTGGAGGCGCCCATATAT 59.385 55.000 26.15 1.92 38.66 0.86
227 228 0.762842 ACAGTGGAGGCGCCCATATA 60.763 55.000 26.15 2.01 38.66 0.86
228 229 2.044806 GACAGTGGAGGCGCCCATAT 62.045 60.000 26.15 3.43 38.66 1.78
229 230 2.687200 ACAGTGGAGGCGCCCATA 60.687 61.111 26.15 6.39 38.66 2.74
230 231 4.101448 GACAGTGGAGGCGCCCAT 62.101 66.667 26.15 4.93 38.66 4.00
242 243 2.923035 CCCCTCCACCACGACAGT 60.923 66.667 0.00 0.00 0.00 3.55
243 244 4.394712 GCCCCTCCACCACGACAG 62.395 72.222 0.00 0.00 0.00 3.51
244 245 4.954118 AGCCCCTCCACCACGACA 62.954 66.667 0.00 0.00 0.00 4.35
245 246 3.637273 AAGCCCCTCCACCACGAC 61.637 66.667 0.00 0.00 0.00 4.34
246 247 3.636231 CAAGCCCCTCCACCACGA 61.636 66.667 0.00 0.00 0.00 4.35
247 248 3.491598 AACAAGCCCCTCCACCACG 62.492 63.158 0.00 0.00 0.00 4.94
248 249 1.903404 CAACAAGCCCCTCCACCAC 60.903 63.158 0.00 0.00 0.00 4.16
249 250 2.081787 TCAACAAGCCCCTCCACCA 61.082 57.895 0.00 0.00 0.00 4.17
250 251 1.603739 GTCAACAAGCCCCTCCACC 60.604 63.158 0.00 0.00 0.00 4.61
251 252 1.603739 GGTCAACAAGCCCCTCCAC 60.604 63.158 0.00 0.00 0.00 4.02
252 253 2.840753 GGGTCAACAAGCCCCTCCA 61.841 63.158 0.00 0.00 39.82 3.86
253 254 2.035783 GGGTCAACAAGCCCCTCC 59.964 66.667 0.00 0.00 39.82 4.30
254 255 2.359975 CGGGTCAACAAGCCCCTC 60.360 66.667 0.00 0.00 43.00 4.30
255 256 2.852075 TCGGGTCAACAAGCCCCT 60.852 61.111 0.00 0.00 43.00 4.79
256 257 2.671963 GTCGGGTCAACAAGCCCC 60.672 66.667 0.00 0.00 43.00 5.80
257 258 1.303317 ATGTCGGGTCAACAAGCCC 60.303 57.895 0.00 0.00 43.00 5.19
258 259 1.305930 GGATGTCGGGTCAACAAGCC 61.306 60.000 0.00 0.00 42.48 4.35
259 260 1.305930 GGGATGTCGGGTCAACAAGC 61.306 60.000 0.00 0.00 0.00 4.01
260 261 0.324943 AGGGATGTCGGGTCAACAAG 59.675 55.000 0.00 0.00 0.00 3.16
261 262 0.768622 AAGGGATGTCGGGTCAACAA 59.231 50.000 0.00 0.00 0.00 2.83
262 263 0.036164 CAAGGGATGTCGGGTCAACA 59.964 55.000 0.00 0.00 0.00 3.33
263 264 0.323629 TCAAGGGATGTCGGGTCAAC 59.676 55.000 0.00 0.00 0.00 3.18
264 265 1.003118 CTTCAAGGGATGTCGGGTCAA 59.997 52.381 0.00 0.00 0.00 3.18
265 266 0.613260 CTTCAAGGGATGTCGGGTCA 59.387 55.000 0.00 0.00 0.00 4.02
266 267 0.744771 GCTTCAAGGGATGTCGGGTC 60.745 60.000 0.00 0.00 0.00 4.46
267 268 1.299976 GCTTCAAGGGATGTCGGGT 59.700 57.895 0.00 0.00 0.00 5.28
268 269 1.026718 GTGCTTCAAGGGATGTCGGG 61.027 60.000 0.00 0.00 0.00 5.14
269 270 1.361668 CGTGCTTCAAGGGATGTCGG 61.362 60.000 0.00 0.00 0.00 4.79
270 271 0.389817 TCGTGCTTCAAGGGATGTCG 60.390 55.000 0.00 0.00 0.00 4.35
271 272 1.363744 CTCGTGCTTCAAGGGATGTC 58.636 55.000 0.00 0.00 0.00 3.06
272 273 0.674895 GCTCGTGCTTCAAGGGATGT 60.675 55.000 1.41 0.00 36.03 3.06
273 274 1.699656 CGCTCGTGCTTCAAGGGATG 61.700 60.000 7.97 0.00 36.97 3.51
274 275 1.448540 CGCTCGTGCTTCAAGGGAT 60.449 57.895 7.97 0.00 36.97 3.85
275 276 2.048222 CGCTCGTGCTTCAAGGGA 60.048 61.111 7.97 0.00 36.97 4.20
276 277 2.357517 ACGCTCGTGCTTCAAGGG 60.358 61.111 7.97 0.00 36.97 3.95
277 278 2.856032 CACGCTCGTGCTTCAAGG 59.144 61.111 9.55 0.00 39.39 3.61
286 287 1.960763 TGCTTCAATGCACGCTCGT 60.961 52.632 0.00 0.00 38.12 4.18
287 288 2.862436 TGCTTCAATGCACGCTCG 59.138 55.556 0.00 0.00 38.12 5.03
308 309 3.959991 GAAGGTCCACGGCCAGAGC 62.960 68.421 2.24 5.99 38.76 4.09
309 310 2.266055 GAAGGTCCACGGCCAGAG 59.734 66.667 2.24 0.00 0.00 3.35
310 311 2.525629 TGAAGGTCCACGGCCAGA 60.526 61.111 2.24 0.00 0.00 3.86
311 312 2.358737 GTGAAGGTCCACGGCCAG 60.359 66.667 2.24 0.00 0.00 4.85
312 313 2.448582 AAGTGAAGGTCCACGGCCA 61.449 57.895 2.24 0.00 41.67 5.36
313 314 1.966451 CAAGTGAAGGTCCACGGCC 60.966 63.158 0.00 0.00 41.67 6.13
314 315 1.966451 CCAAGTGAAGGTCCACGGC 60.966 63.158 0.00 0.00 41.67 5.68
315 316 0.324943 ATCCAAGTGAAGGTCCACGG 59.675 55.000 0.00 0.00 41.67 4.94
316 317 2.185004 AATCCAAGTGAAGGTCCACG 57.815 50.000 0.00 0.00 41.67 4.94
317 318 3.486383 TGAAATCCAAGTGAAGGTCCAC 58.514 45.455 0.00 0.00 37.32 4.02
318 319 3.874383 TGAAATCCAAGTGAAGGTCCA 57.126 42.857 0.00 0.00 0.00 4.02
319 320 4.972514 GATGAAATCCAAGTGAAGGTCC 57.027 45.455 0.00 0.00 37.38 4.46
332 333 1.933181 TGATGCGACACGGATGAAATC 59.067 47.619 2.65 0.00 44.55 2.17
333 334 2.022764 TGATGCGACACGGATGAAAT 57.977 45.000 2.65 0.00 38.17 2.17
334 335 1.802069 TTGATGCGACACGGATGAAA 58.198 45.000 2.65 0.00 38.17 2.69
335 336 1.731709 CTTTGATGCGACACGGATGAA 59.268 47.619 2.65 0.00 38.17 2.57
336 337 1.337728 ACTTTGATGCGACACGGATGA 60.338 47.619 2.65 0.00 38.17 2.92
337 338 1.078709 ACTTTGATGCGACACGGATG 58.921 50.000 2.65 0.00 38.17 3.51
338 339 1.078709 CACTTTGATGCGACACGGAT 58.921 50.000 0.00 0.00 41.25 4.18
339 340 0.032815 TCACTTTGATGCGACACGGA 59.967 50.000 0.00 0.00 0.00 4.69
340 341 1.078709 ATCACTTTGATGCGACACGG 58.921 50.000 0.00 0.00 35.43 4.94
341 342 2.149358 CATCACTTTGATGCGACACG 57.851 50.000 3.30 0.00 46.37 4.49
349 350 9.021807 AGAATCAATGTTTCTCATCACTTTGAT 57.978 29.630 1.00 7.32 43.97 2.57
350 351 8.294577 CAGAATCAATGTTTCTCATCACTTTGA 58.705 33.333 3.75 0.00 39.81 2.69
351 352 7.541091 CCAGAATCAATGTTTCTCATCACTTTG 59.459 37.037 3.75 0.00 35.48 2.77
352 353 7.449395 TCCAGAATCAATGTTTCTCATCACTTT 59.551 33.333 3.75 0.00 35.48 2.66
353 354 6.944290 TCCAGAATCAATGTTTCTCATCACTT 59.056 34.615 3.75 0.00 35.48 3.16
354 355 6.479006 TCCAGAATCAATGTTTCTCATCACT 58.521 36.000 3.75 0.00 35.48 3.41
355 356 6.677431 GCTCCAGAATCAATGTTTCTCATCAC 60.677 42.308 3.75 0.00 35.48 3.06
356 357 5.356190 GCTCCAGAATCAATGTTTCTCATCA 59.644 40.000 3.75 0.00 35.48 3.07
357 358 5.503683 CGCTCCAGAATCAATGTTTCTCATC 60.504 44.000 3.75 0.00 35.48 2.92
358 359 4.334759 CGCTCCAGAATCAATGTTTCTCAT 59.665 41.667 3.75 0.00 38.57 2.90
359 360 3.686241 CGCTCCAGAATCAATGTTTCTCA 59.314 43.478 3.75 0.00 31.11 3.27
360 361 3.486542 GCGCTCCAGAATCAATGTTTCTC 60.487 47.826 0.00 0.00 31.11 2.87
361 362 2.421424 GCGCTCCAGAATCAATGTTTCT 59.579 45.455 0.00 1.00 33.75 2.52
362 363 2.478539 GGCGCTCCAGAATCAATGTTTC 60.479 50.000 7.64 0.00 0.00 2.78
363 364 1.474077 GGCGCTCCAGAATCAATGTTT 59.526 47.619 7.64 0.00 0.00 2.83
364 365 1.098050 GGCGCTCCAGAATCAATGTT 58.902 50.000 7.64 0.00 0.00 2.71
365 366 0.254178 AGGCGCTCCAGAATCAATGT 59.746 50.000 7.64 0.00 33.74 2.71
366 367 1.065102 CAAGGCGCTCCAGAATCAATG 59.935 52.381 7.64 0.00 33.74 2.82
367 368 1.340405 ACAAGGCGCTCCAGAATCAAT 60.340 47.619 7.64 0.00 33.74 2.57
368 369 0.036732 ACAAGGCGCTCCAGAATCAA 59.963 50.000 7.64 0.00 33.74 2.57
369 370 0.391661 GACAAGGCGCTCCAGAATCA 60.392 55.000 7.64 0.00 33.74 2.57
370 371 1.424493 CGACAAGGCGCTCCAGAATC 61.424 60.000 7.64 0.00 33.74 2.52
371 372 1.448540 CGACAAGGCGCTCCAGAAT 60.449 57.895 7.64 0.00 33.74 2.40
372 373 1.888436 ATCGACAAGGCGCTCCAGAA 61.888 55.000 7.64 0.00 33.74 3.02
373 374 2.351244 ATCGACAAGGCGCTCCAGA 61.351 57.895 7.64 0.00 33.74 3.86
374 375 2.169789 CATCGACAAGGCGCTCCAG 61.170 63.158 7.64 0.00 33.74 3.86
375 376 2.125552 CATCGACAAGGCGCTCCA 60.126 61.111 7.64 0.00 33.74 3.86
376 377 2.125512 ACATCGACAAGGCGCTCC 60.126 61.111 7.64 0.00 0.00 4.70
377 378 1.687494 GACACATCGACAAGGCGCTC 61.687 60.000 7.64 0.00 0.00 5.03
378 379 1.738099 GACACATCGACAAGGCGCT 60.738 57.895 7.64 0.00 0.00 5.92
379 380 2.027073 TGACACATCGACAAGGCGC 61.027 57.895 0.00 0.00 0.00 6.53
380 381 0.943835 TGTGACACATCGACAAGGCG 60.944 55.000 3.56 0.00 0.00 5.52
381 382 1.069906 GTTGTGACACATCGACAAGGC 60.070 52.381 9.55 0.00 31.11 4.35
382 383 2.476619 GAGTTGTGACACATCGACAAGG 59.523 50.000 9.55 0.00 31.11 3.61
383 384 3.183172 CAGAGTTGTGACACATCGACAAG 59.817 47.826 9.55 3.06 31.11 3.16
384 385 3.123050 CAGAGTTGTGACACATCGACAA 58.877 45.455 9.55 0.00 0.00 3.18
385 386 2.742774 CAGAGTTGTGACACATCGACA 58.257 47.619 9.55 0.00 0.00 4.35
386 387 1.457303 GCAGAGTTGTGACACATCGAC 59.543 52.381 9.55 4.91 0.00 4.20
387 388 1.783284 GCAGAGTTGTGACACATCGA 58.217 50.000 9.55 0.00 0.00 3.59
388 389 0.436150 CGCAGAGTTGTGACACATCG 59.564 55.000 9.55 3.42 36.95 3.84
389 390 1.783284 TCGCAGAGTTGTGACACATC 58.217 50.000 9.55 8.87 38.84 3.06
390 391 3.986970 TCGCAGAGTTGTGACACAT 57.013 47.368 9.55 0.00 38.84 3.21
402 403 0.244994 GGTCTTTGAGCTCTCGCAGA 59.755 55.000 16.19 7.84 39.10 4.26
403 404 1.075425 CGGTCTTTGAGCTCTCGCAG 61.075 60.000 16.19 5.56 39.10 5.18
404 405 1.080501 CGGTCTTTGAGCTCTCGCA 60.081 57.895 16.19 0.00 39.10 5.10
405 406 0.388649 TTCGGTCTTTGAGCTCTCGC 60.389 55.000 16.19 0.80 0.00 5.03
406 407 1.200252 TCTTCGGTCTTTGAGCTCTCG 59.800 52.381 16.19 9.12 0.00 4.04
407 408 3.305398 TTCTTCGGTCTTTGAGCTCTC 57.695 47.619 16.19 0.51 0.00 3.20
408 409 3.181465 TGTTTCTTCGGTCTTTGAGCTCT 60.181 43.478 16.19 0.00 0.00 4.09
409 410 3.131396 TGTTTCTTCGGTCTTTGAGCTC 58.869 45.455 6.82 6.82 0.00 4.09
410 411 3.194005 TGTTTCTTCGGTCTTTGAGCT 57.806 42.857 0.00 0.00 0.00 4.09
411 412 3.251004 ACATGTTTCTTCGGTCTTTGAGC 59.749 43.478 0.00 0.00 0.00 4.26
412 413 5.424121 AACATGTTTCTTCGGTCTTTGAG 57.576 39.130 4.92 0.00 0.00 3.02
413 414 5.828299 AAACATGTTTCTTCGGTCTTTGA 57.172 34.783 18.13 0.00 0.00 2.69
414 415 6.033341 TCAAAACATGTTTCTTCGGTCTTTG 58.967 36.000 23.47 13.73 31.45 2.77
415 416 6.094881 TCTCAAAACATGTTTCTTCGGTCTTT 59.905 34.615 23.47 1.75 31.45 2.52
416 417 5.588648 TCTCAAAACATGTTTCTTCGGTCTT 59.411 36.000 23.47 2.49 31.45 3.01
417 418 5.007724 GTCTCAAAACATGTTTCTTCGGTCT 59.992 40.000 23.47 3.23 31.45 3.85
418 419 5.205565 GTCTCAAAACATGTTTCTTCGGTC 58.794 41.667 23.47 8.29 31.45 4.79
419 420 4.260620 CGTCTCAAAACATGTTTCTTCGGT 60.261 41.667 23.47 4.72 31.45 4.69
420 421 4.211389 CGTCTCAAAACATGTTTCTTCGG 58.789 43.478 23.47 12.26 31.45 4.30
421 422 4.666176 CACGTCTCAAAACATGTTTCTTCG 59.334 41.667 23.47 21.90 31.45 3.79
422 423 4.437820 GCACGTCTCAAAACATGTTTCTTC 59.562 41.667 23.47 11.61 31.45 2.87
423 424 4.096382 AGCACGTCTCAAAACATGTTTCTT 59.904 37.500 23.47 6.99 31.45 2.52
424 425 3.627577 AGCACGTCTCAAAACATGTTTCT 59.372 39.130 23.47 10.39 31.45 2.52
425 426 3.952535 AGCACGTCTCAAAACATGTTTC 58.047 40.909 23.47 10.17 31.45 2.78
426 427 4.370364 AAGCACGTCTCAAAACATGTTT 57.630 36.364 18.13 18.13 0.00 2.83
427 428 4.370364 AAAGCACGTCTCAAAACATGTT 57.630 36.364 4.92 4.92 0.00 2.71
428 429 4.142491 TGAAAAGCACGTCTCAAAACATGT 60.142 37.500 0.00 0.00 0.00 3.21
429 430 4.350346 TGAAAAGCACGTCTCAAAACATG 58.650 39.130 0.00 0.00 0.00 3.21
430 431 4.630894 TGAAAAGCACGTCTCAAAACAT 57.369 36.364 0.00 0.00 0.00 2.71
431 432 4.630894 ATGAAAAGCACGTCTCAAAACA 57.369 36.364 0.00 0.00 0.00 2.83
432 433 5.034152 TGAATGAAAAGCACGTCTCAAAAC 58.966 37.500 0.00 0.00 0.00 2.43
433 434 5.242069 TGAATGAAAAGCACGTCTCAAAA 57.758 34.783 0.00 0.00 0.00 2.44
434 435 4.891627 TGAATGAAAAGCACGTCTCAAA 57.108 36.364 0.00 0.00 0.00 2.69
435 436 4.514816 TCATGAATGAAAAGCACGTCTCAA 59.485 37.500 0.00 0.00 33.08 3.02
436 437 4.064388 TCATGAATGAAAAGCACGTCTCA 58.936 39.130 0.00 0.00 33.08 3.27
437 438 4.668576 TCATGAATGAAAAGCACGTCTC 57.331 40.909 0.00 0.00 33.08 3.36
438 439 4.083110 CCTTCATGAATGAAAAGCACGTCT 60.083 41.667 8.96 0.00 45.26 4.18
439 440 4.083324 TCCTTCATGAATGAAAAGCACGTC 60.083 41.667 8.96 0.00 45.26 4.34
440 441 3.820467 TCCTTCATGAATGAAAAGCACGT 59.180 39.130 8.96 0.00 45.26 4.49
441 442 4.161333 GTCCTTCATGAATGAAAAGCACG 58.839 43.478 14.09 0.00 45.26 5.34
442 443 5.125100 TGTCCTTCATGAATGAAAAGCAC 57.875 39.130 14.09 3.65 45.26 4.40
443 444 5.477637 TGATGTCCTTCATGAATGAAAAGCA 59.522 36.000 14.09 11.68 45.26 3.91
444 445 5.957798 TGATGTCCTTCATGAATGAAAAGC 58.042 37.500 14.09 9.59 45.26 3.51
445 446 6.034591 GCTGATGTCCTTCATGAATGAAAAG 58.965 40.000 14.09 6.62 45.26 2.27
446 447 5.477637 TGCTGATGTCCTTCATGAATGAAAA 59.522 36.000 14.09 7.27 45.26 2.29
447 448 5.011586 TGCTGATGTCCTTCATGAATGAAA 58.988 37.500 14.09 10.12 45.26 2.69
448 449 4.591929 TGCTGATGTCCTTCATGAATGAA 58.408 39.130 14.09 5.65 43.94 2.57
449 450 4.224991 TGCTGATGTCCTTCATGAATGA 57.775 40.909 8.96 9.05 36.83 2.57
450 451 6.628919 TTATGCTGATGTCCTTCATGAATG 57.371 37.500 8.96 6.49 36.83 2.67
451 452 6.208797 CCATTATGCTGATGTCCTTCATGAAT 59.791 38.462 8.96 0.00 36.83 2.57
452 453 5.533528 CCATTATGCTGATGTCCTTCATGAA 59.466 40.000 8.12 8.12 36.83 2.57
453 454 5.067954 CCATTATGCTGATGTCCTTCATGA 58.932 41.667 0.00 0.00 36.83 3.07
454 455 5.067954 TCCATTATGCTGATGTCCTTCATG 58.932 41.667 0.00 0.00 36.83 3.07
455 456 5.072736 TCTCCATTATGCTGATGTCCTTCAT 59.927 40.000 0.00 0.00 39.77 2.57
456 457 4.409901 TCTCCATTATGCTGATGTCCTTCA 59.590 41.667 0.00 0.00 0.00 3.02
457 458 4.965814 TCTCCATTATGCTGATGTCCTTC 58.034 43.478 0.00 0.00 0.00 3.46
458 459 4.202440 CCTCTCCATTATGCTGATGTCCTT 60.202 45.833 0.00 0.00 0.00 3.36
459 460 3.327172 CCTCTCCATTATGCTGATGTCCT 59.673 47.826 0.00 0.00 0.00 3.85
460 461 3.558746 CCCTCTCCATTATGCTGATGTCC 60.559 52.174 0.00 0.00 0.00 4.02
461 462 3.072184 ACCCTCTCCATTATGCTGATGTC 59.928 47.826 0.00 0.00 0.00 3.06
462 463 3.051581 ACCCTCTCCATTATGCTGATGT 58.948 45.455 0.00 0.00 0.00 3.06
463 464 3.072038 TGACCCTCTCCATTATGCTGATG 59.928 47.826 0.00 0.00 0.00 3.07
464 465 3.321039 TGACCCTCTCCATTATGCTGAT 58.679 45.455 0.00 0.00 0.00 2.90
465 466 2.763039 TGACCCTCTCCATTATGCTGA 58.237 47.619 0.00 0.00 0.00 4.26
466 467 3.784511 ATGACCCTCTCCATTATGCTG 57.215 47.619 0.00 0.00 0.00 4.41
467 468 4.324099 GCATATGACCCTCTCCATTATGCT 60.324 45.833 6.97 0.00 36.03 3.79
468 469 3.944015 GCATATGACCCTCTCCATTATGC 59.056 47.826 6.97 0.00 0.00 3.14
469 470 5.432680 AGCATATGACCCTCTCCATTATG 57.567 43.478 6.97 0.00 0.00 1.90
470 471 5.805751 GCAAGCATATGACCCTCTCCATTAT 60.806 44.000 6.97 0.00 0.00 1.28
471 472 4.505566 GCAAGCATATGACCCTCTCCATTA 60.506 45.833 6.97 0.00 0.00 1.90
472 473 3.749954 GCAAGCATATGACCCTCTCCATT 60.750 47.826 6.97 0.00 0.00 3.16
473 474 2.224719 GCAAGCATATGACCCTCTCCAT 60.225 50.000 6.97 0.00 0.00 3.41
474 475 1.141657 GCAAGCATATGACCCTCTCCA 59.858 52.381 6.97 0.00 0.00 3.86
475 476 1.544314 GGCAAGCATATGACCCTCTCC 60.544 57.143 6.97 0.00 0.00 3.71
476 477 1.141657 TGGCAAGCATATGACCCTCTC 59.858 52.381 6.97 0.00 0.00 3.20
477 478 1.216064 TGGCAAGCATATGACCCTCT 58.784 50.000 6.97 0.00 0.00 3.69
478 479 2.057137 TTGGCAAGCATATGACCCTC 57.943 50.000 6.97 0.00 0.00 4.30
479 480 2.381911 CTTTGGCAAGCATATGACCCT 58.618 47.619 6.97 0.00 0.00 4.34
480 481 2.877043 CTTTGGCAAGCATATGACCC 57.123 50.000 6.97 0.84 0.00 4.46
490 491 2.786564 GAACTCGGCGCTTTGGCAAG 62.787 60.000 7.64 0.00 45.16 4.01
491 492 2.903547 GAACTCGGCGCTTTGGCAA 61.904 57.895 7.64 0.00 45.16 4.52
492 493 3.353836 GAACTCGGCGCTTTGGCA 61.354 61.111 7.64 0.00 45.16 4.92
493 494 3.028366 GAGAACTCGGCGCTTTGGC 62.028 63.158 7.64 0.00 40.44 4.52
494 495 0.951040 AAGAGAACTCGGCGCTTTGG 60.951 55.000 7.64 0.00 34.09 3.28
495 496 0.440371 GAAGAGAACTCGGCGCTTTG 59.560 55.000 7.64 0.00 34.09 2.77
496 497 0.670854 GGAAGAGAACTCGGCGCTTT 60.671 55.000 7.64 0.00 34.09 3.51
497 498 1.079750 GGAAGAGAACTCGGCGCTT 60.080 57.895 7.64 0.00 34.09 4.68
498 499 2.574399 GGAAGAGAACTCGGCGCT 59.426 61.111 7.64 0.00 34.09 5.92
499 500 2.509561 GGGAAGAGAACTCGGCGC 60.510 66.667 0.00 0.00 34.09 6.53
500 501 1.446272 GTGGGAAGAGAACTCGGCG 60.446 63.158 0.00 0.00 34.09 6.46
501 502 1.079057 GGTGGGAAGAGAACTCGGC 60.079 63.158 0.00 0.00 34.09 5.54
502 503 1.215647 CGGTGGGAAGAGAACTCGG 59.784 63.158 0.00 0.00 34.09 4.63
503 504 1.215647 CCGGTGGGAAGAGAACTCG 59.784 63.158 0.00 0.00 34.06 4.18
520 521 2.124736 TAGCAGAACATGGCGCCC 60.125 61.111 26.77 7.94 34.54 6.13
521 522 2.182842 CCTAGCAGAACATGGCGCC 61.183 63.158 22.73 22.73 34.54 6.53
522 523 1.026718 AACCTAGCAGAACATGGCGC 61.027 55.000 0.00 0.00 34.54 6.53
523 524 1.009829 GAACCTAGCAGAACATGGCG 58.990 55.000 0.00 0.00 34.54 5.69
524 525 2.409948 AGAACCTAGCAGAACATGGC 57.590 50.000 0.00 0.00 0.00 4.40
525 526 4.442192 GGAGTAGAACCTAGCAGAACATGG 60.442 50.000 0.00 0.00 0.00 3.66
526 527 4.404073 AGGAGTAGAACCTAGCAGAACATG 59.596 45.833 0.00 0.00 35.84 3.21
527 528 4.404073 CAGGAGTAGAACCTAGCAGAACAT 59.596 45.833 0.00 0.00 35.84 2.71
528 529 3.764434 CAGGAGTAGAACCTAGCAGAACA 59.236 47.826 0.00 0.00 35.84 3.18
529 530 4.017808 TCAGGAGTAGAACCTAGCAGAAC 58.982 47.826 0.00 0.00 35.84 3.01
530 531 4.317530 TCAGGAGTAGAACCTAGCAGAA 57.682 45.455 0.00 0.00 35.84 3.02
531 532 4.528076 ATCAGGAGTAGAACCTAGCAGA 57.472 45.455 0.00 0.00 35.84 4.26
532 533 8.465999 CATTATATCAGGAGTAGAACCTAGCAG 58.534 40.741 0.00 0.00 35.84 4.24
533 534 7.950684 ACATTATATCAGGAGTAGAACCTAGCA 59.049 37.037 0.00 0.00 35.84 3.49
534 535 8.247562 CACATTATATCAGGAGTAGAACCTAGC 58.752 40.741 0.00 0.00 35.84 3.42
535 536 9.303116 ACACATTATATCAGGAGTAGAACCTAG 57.697 37.037 0.00 0.00 35.84 3.02
537 538 9.830186 ATACACATTATATCAGGAGTAGAACCT 57.170 33.333 0.00 0.00 38.40 3.50
538 539 9.862371 CATACACATTATATCAGGAGTAGAACC 57.138 37.037 0.00 0.00 0.00 3.62
539 540 9.360093 GCATACACATTATATCAGGAGTAGAAC 57.640 37.037 0.00 0.00 0.00 3.01
540 541 8.531982 GGCATACACATTATATCAGGAGTAGAA 58.468 37.037 0.00 0.00 0.00 2.10
541 542 7.148069 CGGCATACACATTATATCAGGAGTAGA 60.148 40.741 0.00 0.00 0.00 2.59
542 543 6.975197 CGGCATACACATTATATCAGGAGTAG 59.025 42.308 0.00 0.00 0.00 2.57
543 544 6.661805 TCGGCATACACATTATATCAGGAGTA 59.338 38.462 0.00 0.00 0.00 2.59
544 545 5.480422 TCGGCATACACATTATATCAGGAGT 59.520 40.000 0.00 0.00 0.00 3.85
545 546 5.965922 TCGGCATACACATTATATCAGGAG 58.034 41.667 0.00 0.00 0.00 3.69
546 547 5.993748 TCGGCATACACATTATATCAGGA 57.006 39.130 0.00 0.00 0.00 3.86
547 548 6.340522 TCATCGGCATACACATTATATCAGG 58.659 40.000 0.00 0.00 0.00 3.86
548 549 7.832503 TTCATCGGCATACACATTATATCAG 57.167 36.000 0.00 0.00 0.00 2.90
552 553 9.883142 TCAATATTCATCGGCATACACATTATA 57.117 29.630 0.00 0.00 0.00 0.98
553 554 8.791327 TCAATATTCATCGGCATACACATTAT 57.209 30.769 0.00 0.00 0.00 1.28
554 555 8.614469 TTCAATATTCATCGGCATACACATTA 57.386 30.769 0.00 0.00 0.00 1.90
555 556 7.509141 TTCAATATTCATCGGCATACACATT 57.491 32.000 0.00 0.00 0.00 2.71
556 557 7.509141 TTTCAATATTCATCGGCATACACAT 57.491 32.000 0.00 0.00 0.00 3.21
557 558 6.934048 TTTCAATATTCATCGGCATACACA 57.066 33.333 0.00 0.00 0.00 3.72
579 580 2.823152 GCCCATCCTCCTCCAAGTTTTT 60.823 50.000 0.00 0.00 0.00 1.94
580 581 1.272704 GCCCATCCTCCTCCAAGTTTT 60.273 52.381 0.00 0.00 0.00 2.43
581 582 0.332972 GCCCATCCTCCTCCAAGTTT 59.667 55.000 0.00 0.00 0.00 2.66
582 583 0.846427 TGCCCATCCTCCTCCAAGTT 60.846 55.000 0.00 0.00 0.00 2.66
583 584 1.229951 TGCCCATCCTCCTCCAAGT 60.230 57.895 0.00 0.00 0.00 3.16
584 585 1.225704 GTGCCCATCCTCCTCCAAG 59.774 63.158 0.00 0.00 0.00 3.61
585 586 2.669133 CGTGCCCATCCTCCTCCAA 61.669 63.158 0.00 0.00 0.00 3.53
586 587 3.083349 CGTGCCCATCCTCCTCCA 61.083 66.667 0.00 0.00 0.00 3.86
587 588 2.764128 TCGTGCCCATCCTCCTCC 60.764 66.667 0.00 0.00 0.00 4.30
588 589 1.758514 TCTCGTGCCCATCCTCCTC 60.759 63.158 0.00 0.00 0.00 3.71
589 590 2.060980 GTCTCGTGCCCATCCTCCT 61.061 63.158 0.00 0.00 0.00 3.69
590 591 1.899437 TTGTCTCGTGCCCATCCTCC 61.899 60.000 0.00 0.00 0.00 4.30
591 592 0.036388 TTTGTCTCGTGCCCATCCTC 60.036 55.000 0.00 0.00 0.00 3.71
592 593 0.400213 TTTTGTCTCGTGCCCATCCT 59.600 50.000 0.00 0.00 0.00 3.24
593 594 1.243902 TTTTTGTCTCGTGCCCATCC 58.756 50.000 0.00 0.00 0.00 3.51
613 614 4.759183 GGACTGCATCTCTGTTCTCTTTTT 59.241 41.667 0.00 0.00 0.00 1.94
614 615 4.322567 GGACTGCATCTCTGTTCTCTTTT 58.677 43.478 0.00 0.00 0.00 2.27
615 616 3.616076 CGGACTGCATCTCTGTTCTCTTT 60.616 47.826 0.00 0.00 0.00 2.52
616 617 2.094286 CGGACTGCATCTCTGTTCTCTT 60.094 50.000 0.00 0.00 0.00 2.85
617 618 1.476085 CGGACTGCATCTCTGTTCTCT 59.524 52.381 0.00 0.00 0.00 3.10
618 619 1.919918 CGGACTGCATCTCTGTTCTC 58.080 55.000 0.00 0.00 0.00 2.87
619 620 0.108424 GCGGACTGCATCTCTGTTCT 60.108 55.000 0.00 0.00 45.45 3.01
620 621 2.378028 GCGGACTGCATCTCTGTTC 58.622 57.895 0.00 0.00 45.45 3.18
621 622 4.606071 GCGGACTGCATCTCTGTT 57.394 55.556 0.00 0.00 45.45 3.16
676 677 2.892425 GAAGGCGGCATCGAGGTG 60.892 66.667 13.08 0.00 39.00 4.00
678 679 2.279784 GAGAAGGCGGCATCGAGG 60.280 66.667 13.08 0.00 39.00 4.63
871 874 0.893270 TGTTAGCAACTGCCGGCAAT 60.893 50.000 32.09 20.27 43.38 3.56
881 884 1.136721 CGTACGCTGTGTGTTAGCAAC 60.137 52.381 0.52 0.00 41.18 4.17
882 885 1.133407 CGTACGCTGTGTGTTAGCAA 58.867 50.000 0.52 0.00 41.18 3.91
883 886 0.665068 CCGTACGCTGTGTGTTAGCA 60.665 55.000 10.49 0.00 41.18 3.49
884 887 0.665369 ACCGTACGCTGTGTGTTAGC 60.665 55.000 10.49 0.00 37.80 3.09
885 888 1.717645 GAACCGTACGCTGTGTGTTAG 59.282 52.381 10.49 0.00 0.00 2.34
886 889 1.602668 GGAACCGTACGCTGTGTGTTA 60.603 52.381 10.49 0.00 0.00 2.41
887 890 0.877213 GGAACCGTACGCTGTGTGTT 60.877 55.000 10.49 7.41 0.00 3.32
888 891 1.300388 GGAACCGTACGCTGTGTGT 60.300 57.895 10.49 0.00 0.00 3.72
889 892 2.025418 GGGAACCGTACGCTGTGTG 61.025 63.158 10.49 0.00 40.86 3.82
890 893 2.341176 GGGAACCGTACGCTGTGT 59.659 61.111 10.49 0.00 40.86 3.72
932 956 1.645704 TACACGGAGAGCAGAGCGTC 61.646 60.000 0.00 0.00 0.00 5.19
1652 1734 2.158449 CACAAGAACAGAGGAATGTCGC 59.842 50.000 0.00 0.00 31.50 5.19
1654 1736 2.158449 CGCACAAGAACAGAGGAATGTC 59.842 50.000 0.00 0.00 31.50 3.06
1676 1759 5.649395 TCCTGCTGGAATTCAATCAGTTAAG 59.351 40.000 10.32 7.43 39.87 1.85
1684 1767 4.581309 TCTTCTCCTGCTGGAATTCAAT 57.419 40.909 13.89 0.00 42.66 2.57
1791 1874 2.203788 AGGTTCCTCGGCACCAGA 60.204 61.111 7.51 0.00 35.25 3.86
1806 1889 4.828296 GCCATGGCCTCCACCAGG 62.828 72.222 27.24 0.00 44.71 4.45
1964 2049 2.432456 GTGCATGGTCGAGACGCA 60.432 61.111 0.00 1.23 0.00 5.24
2000 2085 4.436523 CGACGATTGTTGTCTTCAAAAACC 59.563 41.667 0.00 0.00 34.16 3.27
2061 2165 5.529800 CACACATGGATGCATCTTATCAGAA 59.470 40.000 25.28 3.09 30.76 3.02
2062 2166 5.061179 CACACATGGATGCATCTTATCAGA 58.939 41.667 25.28 2.76 0.00 3.27
2063 2167 4.820173 ACACACATGGATGCATCTTATCAG 59.180 41.667 25.28 15.37 0.00 2.90
2077 2196 3.059393 CGATTAGCTATGCACACACATGG 60.059 47.826 0.00 0.00 0.00 3.66
2078 2197 3.803778 TCGATTAGCTATGCACACACATG 59.196 43.478 0.00 0.00 0.00 3.21
2100 2219 7.450903 GTGATGCCTACACCTAATTAACCTAT 58.549 38.462 0.00 0.00 32.84 2.57
2182 2305 1.531149 ACAAAATCGAGCGGTGTTCAG 59.469 47.619 0.00 0.00 0.00 3.02
2183 2306 1.588674 ACAAAATCGAGCGGTGTTCA 58.411 45.000 0.00 0.00 0.00 3.18
2194 2317 4.261572 CCCATACATGCCCTTACAAAATCG 60.262 45.833 0.00 0.00 0.00 3.34
2206 2329 0.396435 TCCATCGTCCCATACATGCC 59.604 55.000 0.00 0.00 0.00 4.40
2295 2418 1.833787 TTGGTGGCTACGGGGAGAAC 61.834 60.000 0.00 0.00 0.00 3.01
2301 2424 1.376812 GGTTCTTGGTGGCTACGGG 60.377 63.158 0.00 0.00 0.00 5.28
2346 2469 4.700365 GTGCGCTGGTTTTCGGCC 62.700 66.667 9.73 0.00 44.74 6.13
2347 2470 4.700365 GGTGCGCTGGTTTTCGGC 62.700 66.667 9.73 0.00 44.14 5.54
2358 2481 2.254350 GAAAGAAACCGGGTGCGC 59.746 61.111 6.32 0.00 0.00 6.09
2365 2493 1.862602 CGCCCAAGGGAAAGAAACCG 61.863 60.000 9.92 0.00 37.50 4.44
2368 2496 1.906333 GCCGCCCAAGGGAAAGAAA 60.906 57.895 9.92 0.00 37.50 2.52
2410 2538 3.605634 TGAATACACATGGAACGAAGGG 58.394 45.455 0.00 0.00 0.00 3.95
2415 2543 6.252869 GTGTACTACTGAATACACATGGAACG 59.747 42.308 9.14 0.00 46.86 3.95
2465 2598 1.750399 CCCGAGCCAAAGTCATGGG 60.750 63.158 0.00 0.00 41.01 4.00
2487 2620 7.748691 AGATATAGAGGAAACTTACTCGACC 57.251 40.000 0.00 0.00 43.12 4.79
2507 2640 7.226720 GGATAACCAAAGCTTCGAATGAAGATA 59.773 37.037 0.00 0.00 43.86 1.98
2530 2663 2.919602 ACACTCCAATAGGTGTTGGGAT 59.080 45.455 5.74 0.00 46.89 3.85
2539 2672 5.896073 AATCCTAAGGACACTCCAATAGG 57.104 43.478 11.40 11.40 43.84 2.57
2540 2673 6.540189 CACAAATCCTAAGGACACTCCAATAG 59.460 42.308 0.00 0.00 39.61 1.73
2542 2675 5.256474 CACAAATCCTAAGGACACTCCAAT 58.744 41.667 0.00 0.00 39.61 3.16
2561 2694 2.324330 CGCGAATGTCCCTGCACAA 61.324 57.895 0.00 0.00 0.00 3.33
2571 2704 3.105203 CACAACAAAAAGACGCGAATGT 58.895 40.909 15.93 5.23 0.00 2.71
2579 2712 5.505159 GCCACTAGTACCACAACAAAAAGAC 60.505 44.000 0.00 0.00 0.00 3.01
2585 2718 1.270412 CGGCCACTAGTACCACAACAA 60.270 52.381 2.24 0.00 0.00 2.83
2591 2724 2.975536 GTGCGGCCACTAGTACCA 59.024 61.111 2.24 0.00 38.93 3.25
2611 2744 3.979347 AGCCACCTATCATCAAGGAAGAT 59.021 43.478 0.00 0.00 37.57 2.40
2621 2754 5.730207 AGATCCAATCATAGCCACCTATCAT 59.270 40.000 0.00 0.00 31.92 2.45
2655 2790 0.673644 CGACCACTGTCCCAACCATC 60.674 60.000 0.00 0.00 38.32 3.51
2703 2838 5.365619 CACTAACTACCCTCAACAACAACT 58.634 41.667 0.00 0.00 0.00 3.16
2745 2883 1.616865 CAACTCGGTCCCTAAGTGTCA 59.383 52.381 0.00 0.00 0.00 3.58
2748 2886 1.402456 CGTCAACTCGGTCCCTAAGTG 60.402 57.143 0.00 0.00 0.00 3.16
2749 2887 0.886563 CGTCAACTCGGTCCCTAAGT 59.113 55.000 0.00 0.00 0.00 2.24
2750 2888 0.886563 ACGTCAACTCGGTCCCTAAG 59.113 55.000 0.00 0.00 34.94 2.18
2753 2891 2.273912 GGACGTCAACTCGGTCCCT 61.274 63.158 18.91 0.00 34.94 4.20
2754 2892 2.260743 GGACGTCAACTCGGTCCC 59.739 66.667 18.91 0.00 34.94 4.46
2780 3610 0.096976 CTCGTCGATGCCGCAAAAAT 59.903 50.000 0.00 0.00 35.37 1.82
2794 3624 3.788672 AGGATGCCAAATCCTCGTC 57.211 52.632 0.88 0.00 44.86 4.20
2815 3645 1.063417 AGAAAGGCATTCATGGGGAGG 60.063 52.381 5.17 0.00 40.72 4.30
2829 3659 3.616956 TGACCTGATGCACTAGAAAGG 57.383 47.619 0.00 0.00 0.00 3.11
2832 3662 5.122239 CGAAAAATGACCTGATGCACTAGAA 59.878 40.000 0.00 0.00 0.00 2.10
2837 3667 3.236816 CACGAAAAATGACCTGATGCAC 58.763 45.455 0.00 0.00 0.00 4.57
2858 3688 2.004408 ATGGGGGAGGAGCATGAAGC 62.004 60.000 0.00 0.00 46.19 3.86
2859 3689 0.110104 GATGGGGGAGGAGCATGAAG 59.890 60.000 0.00 0.00 0.00 3.02
2862 3692 0.110104 GAAGATGGGGGAGGAGCATG 59.890 60.000 0.00 0.00 0.00 4.06
2863 3693 1.414061 CGAAGATGGGGGAGGAGCAT 61.414 60.000 0.00 0.00 0.00 3.79
2876 3707 0.613777 GAAGGGGACACCACGAAGAT 59.386 55.000 0.00 0.00 43.89 2.40
2879 3710 2.091102 GACGAAGGGGACACCACGAA 62.091 60.000 17.76 0.00 43.89 3.85
2904 3735 2.028130 ACAACTTTCGCCAATTCCACA 58.972 42.857 0.00 0.00 0.00 4.17
2910 3741 2.034558 CCTGAACACAACTTTCGCCAAT 59.965 45.455 0.00 0.00 0.00 3.16
2917 3748 2.024414 GCACCTCCTGAACACAACTTT 58.976 47.619 0.00 0.00 0.00 2.66
2929 3760 2.269940 ACCAATGTAGAAGCACCTCCT 58.730 47.619 0.00 0.00 0.00 3.69
2933 3764 4.035208 CGGATAAACCAATGTAGAAGCACC 59.965 45.833 0.00 0.00 38.90 5.01
2937 3768 4.634004 TGCACGGATAAACCAATGTAGAAG 59.366 41.667 0.00 0.00 38.90 2.85
2958 3789 4.199310 TCAGGAAGTTACCATGCTAATGC 58.801 43.478 0.00 0.00 40.20 3.56
2962 3793 4.199310 GCAATCAGGAAGTTACCATGCTA 58.801 43.478 0.00 0.00 0.00 3.49
2963 3794 3.019564 GCAATCAGGAAGTTACCATGCT 58.980 45.455 0.00 0.00 0.00 3.79
2964 3795 2.754552 TGCAATCAGGAAGTTACCATGC 59.245 45.455 0.00 0.00 0.00 4.06
2965 3796 4.627611 CTGCAATCAGGAAGTTACCATG 57.372 45.455 0.00 0.00 36.68 3.66
2984 3815 2.086869 CCAACCTTGCAGTGTATCCTG 58.913 52.381 0.00 0.00 35.49 3.86
2986 3817 0.811281 GCCAACCTTGCAGTGTATCC 59.189 55.000 0.00 0.00 0.00 2.59
2987 3818 1.740025 GAGCCAACCTTGCAGTGTATC 59.260 52.381 0.00 0.00 0.00 2.24
2988 3819 1.614317 GGAGCCAACCTTGCAGTGTAT 60.614 52.381 0.00 0.00 0.00 2.29
2990 3821 1.529244 GGAGCCAACCTTGCAGTGT 60.529 57.895 0.00 0.00 0.00 3.55
2991 3822 1.228367 AGGAGCCAACCTTGCAGTG 60.228 57.895 0.00 0.00 36.86 3.66
2993 3824 2.633509 GCAGGAGCCAACCTTGCAG 61.634 63.158 0.00 0.00 38.32 4.41
2994 3825 2.598394 GCAGGAGCCAACCTTGCA 60.598 61.111 0.00 0.00 38.32 4.08
2998 3829 1.304713 CCATTGCAGGAGCCAACCT 60.305 57.895 0.00 0.00 41.13 3.50
2999 3830 0.899717 TTCCATTGCAGGAGCCAACC 60.900 55.000 0.00 0.00 39.25 3.77
3008 5074 2.264813 CCGCTTGATTTTCCATTGCAG 58.735 47.619 0.00 0.00 0.00 4.41
3078 5146 2.279741 CTTTCCCATCGATCGCTGAAA 58.720 47.619 19.90 17.09 0.00 2.69
3081 5149 1.656652 AACTTTCCCATCGATCGCTG 58.343 50.000 11.09 11.54 0.00 5.18
3082 5150 3.536956 TTAACTTTCCCATCGATCGCT 57.463 42.857 11.09 0.00 0.00 4.93
3083 5151 4.813296 AATTAACTTTCCCATCGATCGC 57.187 40.909 11.09 0.00 0.00 4.58
3100 5168 9.545105 TCCCGTAGCTCGAAAAATAAATAATTA 57.455 29.630 7.07 0.00 42.86 1.40
3101 5169 8.441312 TCCCGTAGCTCGAAAAATAAATAATT 57.559 30.769 7.07 0.00 42.86 1.40
3102 5170 8.441312 TTCCCGTAGCTCGAAAAATAAATAAT 57.559 30.769 7.07 0.00 42.86 1.28
3103 5171 7.846644 TTCCCGTAGCTCGAAAAATAAATAA 57.153 32.000 7.07 0.00 42.86 1.40
3104 5172 7.550196 ACTTTCCCGTAGCTCGAAAAATAAATA 59.450 33.333 7.07 0.00 42.86 1.40
3105 5173 6.373495 ACTTTCCCGTAGCTCGAAAAATAAAT 59.627 34.615 7.07 0.00 42.86 1.40
3106 5174 5.702209 ACTTTCCCGTAGCTCGAAAAATAAA 59.298 36.000 7.07 0.00 42.86 1.40
3107 5175 5.240121 ACTTTCCCGTAGCTCGAAAAATAA 58.760 37.500 7.07 0.00 42.86 1.40
3108 5176 4.824289 ACTTTCCCGTAGCTCGAAAAATA 58.176 39.130 7.07 0.00 42.86 1.40
3109 5177 3.671716 ACTTTCCCGTAGCTCGAAAAAT 58.328 40.909 7.07 0.00 42.86 1.82
3110 5178 3.116079 ACTTTCCCGTAGCTCGAAAAA 57.884 42.857 7.07 6.28 42.86 1.94
3111 5179 2.825861 ACTTTCCCGTAGCTCGAAAA 57.174 45.000 7.07 6.55 42.86 2.29
3112 5180 2.825861 AACTTTCCCGTAGCTCGAAA 57.174 45.000 7.07 3.36 42.86 3.46
3113 5181 3.940209 TTAACTTTCCCGTAGCTCGAA 57.060 42.857 7.07 0.00 42.86 3.71
3114 5182 4.460948 AATTAACTTTCCCGTAGCTCGA 57.539 40.909 7.07 0.00 42.86 4.04
3118 5186 7.519488 GCCTGTATTAATTAACTTTCCCGTAGC 60.519 40.741 0.00 0.00 0.00 3.58
3120 5188 6.767423 GGCCTGTATTAATTAACTTTCCCGTA 59.233 38.462 0.00 0.00 0.00 4.02
3122 5190 5.009310 GGGCCTGTATTAATTAACTTTCCCG 59.991 44.000 0.84 0.00 0.00 5.14
3134 5202 6.921486 TCGTATAATCTGGGCCTGTATTAA 57.079 37.500 4.53 0.00 0.00 1.40
3138 5206 3.513912 CCATCGTATAATCTGGGCCTGTA 59.486 47.826 4.53 0.00 0.00 2.74
3156 5230 0.109723 TTGCTATAACCCGGCCCATC 59.890 55.000 0.00 0.00 0.00 3.51
3170 5244 0.321298 GAGTTGTTCGGGCCTTGCTA 60.321 55.000 0.84 0.00 0.00 3.49
3207 5281 3.637273 GCGTTCCCTCCTGGTGGT 61.637 66.667 13.43 0.00 34.77 4.16
3208 5282 2.690653 TTTGCGTTCCCTCCTGGTGG 62.691 60.000 7.84 7.84 34.77 4.61
3211 5285 2.727103 TTTTTGCGTTCCCTCCTGG 58.273 52.632 0.00 0.00 0.00 4.45
3235 5310 2.550606 TCTGCGCGTTGGATTAGTTTTT 59.449 40.909 8.43 0.00 0.00 1.94
3236 5311 2.095919 GTCTGCGCGTTGGATTAGTTTT 60.096 45.455 8.43 0.00 0.00 2.43
3237 5312 1.463444 GTCTGCGCGTTGGATTAGTTT 59.537 47.619 8.43 0.00 0.00 2.66
3238 5313 1.076332 GTCTGCGCGTTGGATTAGTT 58.924 50.000 8.43 0.00 0.00 2.24
3239 5314 1.076533 CGTCTGCGCGTTGGATTAGT 61.077 55.000 8.43 0.00 0.00 2.24
3266 5341 3.467226 GCATCGAACGGGGGAGGA 61.467 66.667 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.