Multiple sequence alignment - TraesCS5A01G492800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G492800 chr5A 100.000 2393 0 0 1 2393 662065159 662062767 0.000000e+00 4420.0
1 TraesCS5A01G492800 chr5A 82.663 646 95 8 3 634 571777133 571777775 7.470000e-155 556.0
2 TraesCS5A01G492800 chr5A 82.270 282 32 13 1000 1266 435475794 435476072 6.650000e-56 228.0
3 TraesCS5A01G492800 chr5A 78.388 273 46 10 997 1266 661666658 661666920 5.290000e-37 165.0
4 TraesCS5A01G492800 chr5A 82.143 112 9 7 764 866 435475555 435475664 4.240000e-13 86.1
5 TraesCS5A01G492800 chr4D 88.532 933 42 22 652 1525 481338291 481339217 0.000000e+00 1070.0
6 TraesCS5A01G492800 chr4D 82.969 640 90 11 10 633 116154680 116154044 5.780000e-156 560.0
7 TraesCS5A01G492800 chr4D 90.000 310 16 7 1638 1935 481339296 481339602 1.040000e-103 387.0
8 TraesCS5A01G492800 chr4D 93.701 127 8 0 1088 1214 477197525 477197399 8.730000e-45 191.0
9 TraesCS5A01G492800 chr4B 88.525 915 59 21 679 1554 609574738 609575645 0.000000e+00 1066.0
10 TraesCS5A01G492800 chr4B 83.619 641 86 12 10 634 545234933 545234296 3.430000e-163 584.0
11 TraesCS5A01G492800 chr4B 83.489 321 29 10 1638 1935 609575680 609575999 6.510000e-71 278.0
12 TraesCS5A01G492800 chr1A 93.991 466 15 1 1941 2393 473487430 473486965 0.000000e+00 693.0
13 TraesCS5A01G492800 chr1A 83.540 644 92 9 3 633 395430561 395429919 7.370000e-165 590.0
14 TraesCS5A01G492800 chr4A 97.059 408 12 0 1940 2347 566116574 566116167 0.000000e+00 688.0
15 TraesCS5A01G492800 chr4A 97.590 83 2 0 2311 2393 731448007 731447925 2.480000e-30 143.0
16 TraesCS5A01G492800 chr3A 92.827 474 18 3 1934 2393 726445381 726445852 0.000000e+00 673.0
17 TraesCS5A01G492800 chr3A 80.952 273 49 3 365 634 239961298 239961026 1.860000e-51 213.0
18 TraesCS5A01G492800 chr2A 96.069 407 16 0 1941 2347 755122813 755123219 0.000000e+00 664.0
19 TraesCS5A01G492800 chr2A 94.629 391 18 3 1943 2332 751633430 751633818 9.460000e-169 603.0
20 TraesCS5A01G492800 chr2A 92.857 84 5 1 2311 2393 694803057 694802974 1.160000e-23 121.0
21 TraesCS5A01G492800 chr7D 84.472 644 83 10 5 633 53630052 53629411 9.400000e-174 619.0
22 TraesCS5A01G492800 chr7D 86.438 553 62 7 5 545 5097547 5098098 5.700000e-166 593.0
23 TraesCS5A01G492800 chr7D 83.696 644 75 13 3 633 473110075 473110701 4.430000e-162 580.0
24 TraesCS5A01G492800 chr7D 82.326 645 100 5 3 634 552926852 552926209 4.500000e-152 547.0
25 TraesCS5A01G492800 chr7A 84.389 647 83 11 3 634 477841577 477842220 9.400000e-174 619.0
26 TraesCS5A01G492800 chr6A 95.141 391 19 0 1943 2333 555414050 555413660 3.380000e-173 617.0
27 TraesCS5A01G492800 chr6A 94.373 391 20 1 1943 2333 121919072 121918684 1.220000e-167 599.0
28 TraesCS5A01G492800 chr6A 94.286 385 22 0 1949 2333 16613192 16612808 7.370000e-165 590.0
29 TraesCS5A01G492800 chr6A 92.857 84 5 1 2311 2393 6913096 6913013 1.160000e-23 121.0
30 TraesCS5A01G492800 chr6A 91.765 85 5 2 2311 2393 41590919 41591003 1.500000e-22 117.0
31 TraesCS5A01G492800 chr7B 84.211 646 87 8 3 634 429278468 429279112 4.370000e-172 614.0
32 TraesCS5A01G492800 chr6D 86.038 573 65 5 3 561 350559235 350558664 3.400000e-168 601.0
33 TraesCS5A01G492800 chr6D 82.942 639 94 6 10 634 97810575 97811212 1.610000e-156 562.0
34 TraesCS5A01G492800 chr5D 83.696 644 86 8 3 631 468355135 468354496 7.370000e-165 590.0
35 TraesCS5A01G492800 chr5D 80.310 645 112 6 3 633 40888363 40889006 7.740000e-130 473.0
36 TraesCS5A01G492800 chr5D 85.145 276 29 8 1000 1266 333978934 333979206 3.030000e-69 272.0
37 TraesCS5A01G492800 chr3D 86.176 557 61 9 3 545 602281376 602280822 2.650000e-164 588.0
38 TraesCS5A01G492800 chr3D 83.515 643 85 10 6 632 41785260 41784623 4.430000e-162 580.0
39 TraesCS5A01G492800 chr3D 86.885 61 5 3 575 633 330905474 330905415 5.520000e-07 65.8
40 TraesCS5A01G492800 chr2B 83.489 642 93 4 6 634 385174261 385174902 9.530000e-164 586.0
41 TraesCS5A01G492800 chr2D 83.230 644 85 8 3 633 523732621 523731988 9.600000e-159 569.0
42 TraesCS5A01G492800 chrUn 80.576 417 64 15 1941 2349 108940594 108941001 2.990000e-79 305.0
43 TraesCS5A01G492800 chrUn 89.952 209 15 4 1000 1202 475903326 475903118 5.070000e-67 265.0
44 TraesCS5A01G492800 chr5B 85.870 276 27 9 1000 1266 390523929 390524201 1.400000e-72 283.0
45 TraesCS5A01G492800 chr5B 85.507 276 28 9 1000 1266 390403064 390403336 6.510000e-71 278.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G492800 chr5A 662062767 662065159 2392 True 4420.0 4420 100.000 1 2393 1 chr5A.!!$R1 2392
1 TraesCS5A01G492800 chr5A 571777133 571777775 642 False 556.0 556 82.663 3 634 1 chr5A.!!$F1 631
2 TraesCS5A01G492800 chr4D 481338291 481339602 1311 False 728.5 1070 89.266 652 1935 2 chr4D.!!$F1 1283
3 TraesCS5A01G492800 chr4D 116154044 116154680 636 True 560.0 560 82.969 10 633 1 chr4D.!!$R1 623
4 TraesCS5A01G492800 chr4B 609574738 609575999 1261 False 672.0 1066 86.007 679 1935 2 chr4B.!!$F1 1256
5 TraesCS5A01G492800 chr4B 545234296 545234933 637 True 584.0 584 83.619 10 634 1 chr4B.!!$R1 624
6 TraesCS5A01G492800 chr1A 395429919 395430561 642 True 590.0 590 83.540 3 633 1 chr1A.!!$R1 630
7 TraesCS5A01G492800 chr7D 53629411 53630052 641 True 619.0 619 84.472 5 633 1 chr7D.!!$R1 628
8 TraesCS5A01G492800 chr7D 5097547 5098098 551 False 593.0 593 86.438 5 545 1 chr7D.!!$F1 540
9 TraesCS5A01G492800 chr7D 473110075 473110701 626 False 580.0 580 83.696 3 633 1 chr7D.!!$F2 630
10 TraesCS5A01G492800 chr7D 552926209 552926852 643 True 547.0 547 82.326 3 634 1 chr7D.!!$R2 631
11 TraesCS5A01G492800 chr7A 477841577 477842220 643 False 619.0 619 84.389 3 634 1 chr7A.!!$F1 631
12 TraesCS5A01G492800 chr7B 429278468 429279112 644 False 614.0 614 84.211 3 634 1 chr7B.!!$F1 631
13 TraesCS5A01G492800 chr6D 350558664 350559235 571 True 601.0 601 86.038 3 561 1 chr6D.!!$R1 558
14 TraesCS5A01G492800 chr6D 97810575 97811212 637 False 562.0 562 82.942 10 634 1 chr6D.!!$F1 624
15 TraesCS5A01G492800 chr5D 468354496 468355135 639 True 590.0 590 83.696 3 631 1 chr5D.!!$R1 628
16 TraesCS5A01G492800 chr5D 40888363 40889006 643 False 473.0 473 80.310 3 633 1 chr5D.!!$F1 630
17 TraesCS5A01G492800 chr3D 602280822 602281376 554 True 588.0 588 86.176 3 545 1 chr3D.!!$R3 542
18 TraesCS5A01G492800 chr3D 41784623 41785260 637 True 580.0 580 83.515 6 632 1 chr3D.!!$R1 626
19 TraesCS5A01G492800 chr2B 385174261 385174902 641 False 586.0 586 83.489 6 634 1 chr2B.!!$F1 628
20 TraesCS5A01G492800 chr2D 523731988 523732621 633 True 569.0 569 83.230 3 633 1 chr2D.!!$R1 630

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
636 655 0.17668 CGGCTGTAGATGCTCTTGGT 59.823 55.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2079 2217 0.035056 CCAGGAGATGGCCGAAAACT 60.035 55.0 0.0 0.0 43.83 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 0.746659 AACAGAGCCACTTTGCAACC 59.253 50.000 0.00 0.00 0.00 3.77
63 64 1.271840 AAGCGGCTGGGAAGGATGTA 61.272 55.000 1.81 0.00 0.00 2.29
141 142 7.577426 GCAATGATGTGGGAATCAGAAACTTTA 60.577 37.037 0.00 0.00 39.84 1.85
180 181 6.670077 TGTTGTGTTATTCTGCGCAATATA 57.330 33.333 13.05 9.30 37.42 0.86
203 204 1.065199 TGTCAAGGATGAGGGTGATGC 60.065 52.381 0.00 0.00 35.88 3.91
238 242 3.258872 CCATGATTTCAAAGCACCTGGAA 59.741 43.478 2.32 0.00 30.46 3.53
347 351 2.094026 ACACGCAGCTACTCAATGATCA 60.094 45.455 0.00 0.00 0.00 2.92
351 355 3.183976 CGCAGCTACTCAATGATCATGTC 59.816 47.826 9.46 0.00 0.00 3.06
376 390 3.807209 GCACATGTGGACAACTAAGGAGT 60.807 47.826 26.55 0.00 37.59 3.85
545 563 7.638444 TGTGGATACCAAAGGAAAATATGAGA 58.362 34.615 0.00 0.00 34.18 3.27
546 564 8.112822 TGTGGATACCAAAGGAAAATATGAGAA 58.887 33.333 0.00 0.00 34.18 2.87
549 567 9.190317 GGATACCAAAGGAAAATATGAGAACTT 57.810 33.333 0.00 0.00 0.00 2.66
555 573 8.786898 CAAAGGAAAATATGAGAACTTGTCTGA 58.213 33.333 0.00 0.00 36.41 3.27
586 604 2.388232 GCATTTCCGGTCGCGTTCT 61.388 57.895 5.77 0.00 0.00 3.01
611 630 7.335627 TCGAACATATAAGGGTCAGATTTGTT 58.664 34.615 0.00 0.00 30.55 2.83
634 653 0.461548 TCCGGCTGTAGATGCTCTTG 59.538 55.000 0.00 0.00 0.00 3.02
635 654 0.531532 CCGGCTGTAGATGCTCTTGG 60.532 60.000 0.00 0.00 0.00 3.61
636 655 0.176680 CGGCTGTAGATGCTCTTGGT 59.823 55.000 0.00 0.00 0.00 3.67
637 656 1.409064 CGGCTGTAGATGCTCTTGGTA 59.591 52.381 0.00 0.00 0.00 3.25
638 657 2.799917 CGGCTGTAGATGCTCTTGGTAC 60.800 54.545 0.00 0.00 0.00 3.34
639 658 2.432510 GGCTGTAGATGCTCTTGGTACT 59.567 50.000 0.00 0.00 0.00 2.73
640 659 3.118592 GGCTGTAGATGCTCTTGGTACTT 60.119 47.826 0.00 0.00 0.00 2.24
641 660 4.099573 GGCTGTAGATGCTCTTGGTACTTA 59.900 45.833 0.00 0.00 0.00 2.24
642 661 5.285651 GCTGTAGATGCTCTTGGTACTTAG 58.714 45.833 0.00 0.00 0.00 2.18
643 662 5.737635 GCTGTAGATGCTCTTGGTACTTAGG 60.738 48.000 0.00 0.00 0.00 2.69
644 663 5.516044 TGTAGATGCTCTTGGTACTTAGGA 58.484 41.667 0.00 0.00 0.00 2.94
645 664 5.955959 TGTAGATGCTCTTGGTACTTAGGAA 59.044 40.000 0.00 0.00 0.00 3.36
646 665 5.346181 AGATGCTCTTGGTACTTAGGAAC 57.654 43.478 0.00 0.00 0.00 3.62
647 666 3.975168 TGCTCTTGGTACTTAGGAACC 57.025 47.619 0.00 0.00 36.24 3.62
648 667 2.232941 TGCTCTTGGTACTTAGGAACCG 59.767 50.000 0.00 0.00 38.70 4.44
649 668 2.494870 GCTCTTGGTACTTAGGAACCGA 59.505 50.000 0.00 0.00 38.70 4.69
650 669 3.429135 GCTCTTGGTACTTAGGAACCGAG 60.429 52.174 13.87 13.87 45.31 4.63
792 817 1.444553 CTCTTCCGTCGCCACAGAC 60.445 63.158 0.00 0.00 37.76 3.51
869 897 1.134530 GATCGCGAGGAACAGTGACG 61.135 60.000 16.66 0.00 0.00 4.35
870 898 1.863662 ATCGCGAGGAACAGTGACGT 61.864 55.000 16.66 0.00 0.00 4.34
873 901 1.004277 GCGAGGAACAGTGACGTCTG 61.004 60.000 17.92 10.22 40.80 3.51
874 902 0.387367 CGAGGAACAGTGACGTCTGG 60.387 60.000 17.92 8.52 39.48 3.86
875 903 0.959553 GAGGAACAGTGACGTCTGGA 59.040 55.000 17.92 0.00 39.48 3.86
930 958 6.741109 TGGCTACAGCATTCAATATCATTTG 58.259 36.000 3.24 0.00 44.36 2.32
932 960 5.632347 GCTACAGCATTCAATATCATTTGCC 59.368 40.000 0.00 0.00 41.59 4.52
933 961 4.952460 ACAGCATTCAATATCATTTGCCC 58.048 39.130 0.00 0.00 0.00 5.36
934 962 4.406326 ACAGCATTCAATATCATTTGCCCA 59.594 37.500 0.00 0.00 0.00 5.36
935 963 4.988540 CAGCATTCAATATCATTTGCCCAG 59.011 41.667 0.00 0.00 0.00 4.45
936 964 3.744426 GCATTCAATATCATTTGCCCAGC 59.256 43.478 0.00 0.00 0.00 4.85
937 965 3.713858 TTCAATATCATTTGCCCAGCG 57.286 42.857 0.00 0.00 0.00 5.18
939 967 0.675633 AATATCATTTGCCCAGCGCC 59.324 50.000 2.29 0.00 36.24 6.53
940 968 0.178981 ATATCATTTGCCCAGCGCCT 60.179 50.000 2.29 0.00 36.24 5.52
941 969 0.819259 TATCATTTGCCCAGCGCCTC 60.819 55.000 2.29 0.00 36.24 4.70
957 985 2.342354 CGCCTCAAATTTCATTCGCAAC 59.658 45.455 0.00 0.00 0.00 4.17
961 989 5.404946 CCTCAAATTTCATTCGCAACTCAT 58.595 37.500 0.00 0.00 0.00 2.90
962 990 5.865552 CCTCAAATTTCATTCGCAACTCATT 59.134 36.000 0.00 0.00 0.00 2.57
963 991 6.366877 CCTCAAATTTCATTCGCAACTCATTT 59.633 34.615 0.00 0.00 0.00 2.32
974 1002 3.004024 CAACTCATTTGCACAGTCACC 57.996 47.619 0.00 0.00 0.00 4.02
975 1003 1.229428 ACTCATTTGCACAGTCACCG 58.771 50.000 0.00 0.00 0.00 4.94
1022 1071 2.297701 GGAACAGCCAAACAGTGAGAA 58.702 47.619 0.00 0.00 36.34 2.87
1284 1336 1.078708 CAGGTATGTTTCCGCCGGT 60.079 57.895 1.63 0.00 0.00 5.28
1332 1384 3.003763 GGGAGGACGGAGGCAAGT 61.004 66.667 0.00 0.00 0.00 3.16
1333 1385 2.579738 GGAGGACGGAGGCAAGTC 59.420 66.667 0.00 0.00 36.70 3.01
1360 1415 1.676635 GTTGCTGCTGCTCCCATGA 60.677 57.895 17.00 0.00 40.48 3.07
1480 1556 5.221048 CCGTATTTTGGGCTCCTATTTCTTG 60.221 44.000 0.00 0.00 0.00 3.02
1495 1576 7.069455 TCCTATTTCTTGTGTATTCTCCGATCA 59.931 37.037 0.00 0.00 0.00 2.92
1544 1641 8.633075 AATTTTCTTCAAATATATGTGTGCCG 57.367 30.769 2.77 0.00 33.60 5.69
1547 1644 5.423886 TCTTCAAATATATGTGTGCCGTCA 58.576 37.500 2.77 0.00 0.00 4.35
1554 1651 9.541724 CAAATATATGTGTGCCGTCAAATATAC 57.458 33.333 0.00 0.00 34.97 1.47
1555 1652 9.502091 AAATATATGTGTGCCGTCAAATATACT 57.498 29.630 6.00 0.00 34.97 2.12
1557 1654 7.884816 ATATGTGTGCCGTCAAATATACTAC 57.115 36.000 0.00 0.00 29.50 2.73
1561 1658 5.686397 GTGTGCCGTCAAATATACTACTCTC 59.314 44.000 0.00 0.00 0.00 3.20
1562 1659 5.593095 TGTGCCGTCAAATATACTACTCTCT 59.407 40.000 0.00 0.00 0.00 3.10
1563 1660 6.096423 TGTGCCGTCAAATATACTACTCTCTT 59.904 38.462 0.00 0.00 0.00 2.85
1564 1661 6.637658 GTGCCGTCAAATATACTACTCTCTTC 59.362 42.308 0.00 0.00 0.00 2.87
1565 1662 5.852229 GCCGTCAAATATACTACTCTCTTCG 59.148 44.000 0.00 0.00 0.00 3.79
1566 1663 6.513066 GCCGTCAAATATACTACTCTCTTCGT 60.513 42.308 0.00 0.00 0.00 3.85
1567 1664 7.416022 CCGTCAAATATACTACTCTCTTCGTT 58.584 38.462 0.00 0.00 0.00 3.85
1568 1665 7.914346 CCGTCAAATATACTACTCTCTTCGTTT 59.086 37.037 0.00 0.00 0.00 3.60
1569 1666 8.945930 CGTCAAATATACTACTCTCTTCGTTTC 58.054 37.037 0.00 0.00 0.00 2.78
1570 1667 9.784680 GTCAAATATACTACTCTCTTCGTTTCA 57.215 33.333 0.00 0.00 0.00 2.69
1582 1679 9.685828 ACTCTCTTCGTTTCATAATATAAGAGC 57.314 33.333 0.00 0.00 38.75 4.09
1583 1680 9.906660 CTCTCTTCGTTTCATAATATAAGAGCT 57.093 33.333 0.00 0.00 38.75 4.09
1621 1718 8.535690 GGTACCATAATATAAGAGCTTGACAC 57.464 38.462 7.15 0.00 0.00 3.67
1622 1719 8.368668 GGTACCATAATATAAGAGCTTGACACT 58.631 37.037 7.15 0.00 0.00 3.55
1623 1720 9.197694 GTACCATAATATAAGAGCTTGACACTG 57.802 37.037 0.00 0.00 0.00 3.66
1624 1721 6.708054 ACCATAATATAAGAGCTTGACACTGC 59.292 38.462 0.00 0.00 0.00 4.40
1625 1722 6.707608 CCATAATATAAGAGCTTGACACTGCA 59.292 38.462 0.00 0.00 0.00 4.41
1626 1723 7.307632 CCATAATATAAGAGCTTGACACTGCAC 60.308 40.741 0.00 0.00 0.00 4.57
1627 1724 2.908688 TAAGAGCTTGACACTGCACA 57.091 45.000 0.00 0.00 0.00 4.57
1682 1797 3.380004 AGCGTCCTTTCATGTGTCAAAAA 59.620 39.130 0.00 0.00 0.00 1.94
1685 1800 5.569059 GCGTCCTTTCATGTGTCAAAAATAG 59.431 40.000 0.00 0.00 0.00 1.73
1731 1856 4.428845 CAAGGAATGCAGGTGCCT 57.571 55.556 0.00 0.00 41.18 4.75
1745 1870 4.384547 GCAGGTGCCTTTTAACGTTAATTG 59.615 41.667 20.72 15.36 34.31 2.32
1746 1871 5.764131 CAGGTGCCTTTTAACGTTAATTGA 58.236 37.500 20.72 9.68 0.00 2.57
1747 1872 6.210078 CAGGTGCCTTTTAACGTTAATTGAA 58.790 36.000 20.72 11.66 0.00 2.69
1748 1873 6.362283 CAGGTGCCTTTTAACGTTAATTGAAG 59.638 38.462 20.72 19.13 0.00 3.02
1829 1966 3.466836 TCTGTTGTAGGCTCAGTTTGTG 58.533 45.455 0.00 0.00 0.00 3.33
1992 2130 9.616156 TTTATAGCATTTTCGGAAACTATACCA 57.384 29.630 14.17 6.36 0.00 3.25
1993 2131 9.787435 TTATAGCATTTTCGGAAACTATACCAT 57.213 29.630 14.17 0.00 0.00 3.55
1994 2132 6.377327 AGCATTTTCGGAAACTATACCATG 57.623 37.500 1.96 3.97 0.00 3.66
1995 2133 6.119536 AGCATTTTCGGAAACTATACCATGA 58.880 36.000 1.96 0.00 0.00 3.07
1996 2134 6.772716 AGCATTTTCGGAAACTATACCATGAT 59.227 34.615 1.96 0.00 0.00 2.45
1997 2135 7.285401 AGCATTTTCGGAAACTATACCATGATT 59.715 33.333 1.96 0.00 0.00 2.57
1998 2136 7.920682 GCATTTTCGGAAACTATACCATGATTT 59.079 33.333 1.96 0.00 0.00 2.17
1999 2137 9.236691 CATTTTCGGAAACTATACCATGATTTG 57.763 33.333 1.96 0.00 0.00 2.32
2000 2138 8.568676 TTTTCGGAAACTATACCATGATTTGA 57.431 30.769 1.96 0.00 0.00 2.69
2001 2139 8.746052 TTTCGGAAACTATACCATGATTTGAT 57.254 30.769 0.00 0.00 0.00 2.57
2002 2140 8.746052 TTCGGAAACTATACCATGATTTGATT 57.254 30.769 0.00 0.00 0.00 2.57
2003 2141 9.839817 TTCGGAAACTATACCATGATTTGATTA 57.160 29.630 0.00 0.00 0.00 1.75
2004 2142 9.839817 TCGGAAACTATACCATGATTTGATTAA 57.160 29.630 0.00 0.00 0.00 1.40
2024 2162 8.455682 TGATTAAAAATCAAAAGTAGTAGCCCG 58.544 33.333 0.00 0.00 0.00 6.13
2025 2163 7.748691 TTAAAAATCAAAAGTAGTAGCCCGT 57.251 32.000 0.00 0.00 0.00 5.28
2026 2164 5.874895 AAAATCAAAAGTAGTAGCCCGTC 57.125 39.130 0.00 0.00 0.00 4.79
2027 2165 2.642139 TCAAAAGTAGTAGCCCGTCG 57.358 50.000 0.00 0.00 0.00 5.12
2028 2166 1.203052 TCAAAAGTAGTAGCCCGTCGG 59.797 52.381 3.60 3.60 0.00 4.79
2038 2176 4.227134 CCCGTCGGCCATCTCTGG 62.227 72.222 5.50 0.00 46.17 3.86
2039 2177 4.227134 CCGTCGGCCATCTCTGGG 62.227 72.222 2.24 0.00 43.36 4.45
2045 2183 2.203126 GCCATCTCTGGGCCGAAG 60.203 66.667 0.00 0.00 45.87 3.79
2046 2184 3.036429 GCCATCTCTGGGCCGAAGT 62.036 63.158 0.00 0.00 45.87 3.01
2047 2185 1.686325 GCCATCTCTGGGCCGAAGTA 61.686 60.000 0.00 0.00 45.87 2.24
2048 2186 0.390860 CCATCTCTGGGCCGAAGTAG 59.609 60.000 0.00 0.00 39.04 2.57
2049 2187 0.390860 CATCTCTGGGCCGAAGTAGG 59.609 60.000 0.00 0.00 0.00 3.18
2050 2188 0.261991 ATCTCTGGGCCGAAGTAGGA 59.738 55.000 0.00 0.00 0.00 2.94
2051 2189 0.683504 TCTCTGGGCCGAAGTAGGAC 60.684 60.000 0.00 0.00 39.05 3.85
2052 2190 0.684805 CTCTGGGCCGAAGTAGGACT 60.685 60.000 0.00 0.00 39.91 3.85
2053 2191 0.252103 TCTGGGCCGAAGTAGGACTT 60.252 55.000 0.00 0.00 41.95 3.01
2054 2192 0.613777 CTGGGCCGAAGTAGGACTTT 59.386 55.000 0.00 0.00 38.80 2.66
2055 2193 1.003233 CTGGGCCGAAGTAGGACTTTT 59.997 52.381 0.00 0.00 38.80 2.27
2056 2194 1.002773 TGGGCCGAAGTAGGACTTTTC 59.997 52.381 0.00 0.00 38.80 2.29
2057 2195 1.356938 GGCCGAAGTAGGACTTTTCG 58.643 55.000 10.01 10.01 38.80 3.46
2060 2198 1.356938 CGAAGTAGGACTTTTCGGCC 58.643 55.000 0.00 0.00 38.80 6.13
2061 2199 1.337447 CGAAGTAGGACTTTTCGGCCA 60.337 52.381 2.24 0.00 38.80 5.36
2062 2200 2.074576 GAAGTAGGACTTTTCGGCCAC 58.925 52.381 2.24 0.00 38.80 5.01
2063 2201 1.053424 AGTAGGACTTTTCGGCCACA 58.947 50.000 2.24 0.00 0.00 4.17
2064 2202 1.002087 AGTAGGACTTTTCGGCCACAG 59.998 52.381 2.24 0.00 0.00 3.66
2065 2203 0.321298 TAGGACTTTTCGGCCACAGC 60.321 55.000 2.24 0.00 38.76 4.40
2066 2204 1.600916 GGACTTTTCGGCCACAGCT 60.601 57.895 2.24 0.00 39.73 4.24
2067 2205 1.172812 GGACTTTTCGGCCACAGCTT 61.173 55.000 2.24 0.00 39.73 3.74
2068 2206 0.040067 GACTTTTCGGCCACAGCTTG 60.040 55.000 2.24 0.00 39.73 4.01
2076 2214 2.281761 CCACAGCTTGGCCGAAGT 60.282 61.111 14.04 2.44 39.07 3.01
2077 2215 1.003839 CCACAGCTTGGCCGAAGTA 60.004 57.895 14.04 0.00 39.07 2.24
2078 2216 1.021390 CCACAGCTTGGCCGAAGTAG 61.021 60.000 14.04 10.22 39.07 2.57
2079 2217 0.037326 CACAGCTTGGCCGAAGTAGA 60.037 55.000 14.04 0.00 33.73 2.59
2080 2218 0.247736 ACAGCTTGGCCGAAGTAGAG 59.752 55.000 14.04 6.64 33.73 2.43
2081 2219 0.247736 CAGCTTGGCCGAAGTAGAGT 59.752 55.000 14.04 0.00 33.73 3.24
2082 2220 0.977395 AGCTTGGCCGAAGTAGAGTT 59.023 50.000 14.04 0.00 33.73 3.01
2083 2221 1.348036 AGCTTGGCCGAAGTAGAGTTT 59.652 47.619 14.04 0.00 33.73 2.66
2084 2222 2.152016 GCTTGGCCGAAGTAGAGTTTT 58.848 47.619 14.04 0.00 33.73 2.43
2085 2223 2.159824 GCTTGGCCGAAGTAGAGTTTTC 59.840 50.000 14.04 0.00 33.73 2.29
2086 2224 2.074547 TGGCCGAAGTAGAGTTTTCG 57.925 50.000 0.00 0.04 44.17 3.46
2090 2228 2.074547 CGAAGTAGAGTTTTCGGCCA 57.925 50.000 2.24 0.00 41.69 5.36
2091 2229 2.618053 CGAAGTAGAGTTTTCGGCCAT 58.382 47.619 2.24 0.00 41.69 4.40
2092 2230 2.603560 CGAAGTAGAGTTTTCGGCCATC 59.396 50.000 2.24 0.00 41.69 3.51
2093 2231 3.676324 CGAAGTAGAGTTTTCGGCCATCT 60.676 47.826 2.24 0.00 41.69 2.90
2094 2232 3.528597 AGTAGAGTTTTCGGCCATCTC 57.471 47.619 2.24 2.55 0.00 2.75
2095 2233 2.168728 AGTAGAGTTTTCGGCCATCTCC 59.831 50.000 2.24 0.00 0.00 3.71
2096 2234 1.280457 AGAGTTTTCGGCCATCTCCT 58.720 50.000 2.24 0.00 0.00 3.69
2097 2235 1.065854 AGAGTTTTCGGCCATCTCCTG 60.066 52.381 2.24 0.00 0.00 3.86
2105 2243 3.956377 CCATCTCCTGGCCGTAGT 58.044 61.111 0.00 0.00 38.47 2.73
2106 2244 3.127099 CCATCTCCTGGCCGTAGTA 57.873 57.895 0.00 0.00 38.47 1.82
2107 2245 1.633774 CCATCTCCTGGCCGTAGTAT 58.366 55.000 0.00 0.00 38.47 2.12
2108 2246 1.273606 CCATCTCCTGGCCGTAGTATG 59.726 57.143 0.00 0.00 38.47 2.39
2109 2247 2.239400 CATCTCCTGGCCGTAGTATGA 58.761 52.381 0.00 0.00 0.00 2.15
2110 2248 1.688772 TCTCCTGGCCGTAGTATGAC 58.311 55.000 0.00 0.00 0.00 3.06
2111 2249 1.214673 TCTCCTGGCCGTAGTATGACT 59.785 52.381 0.00 0.00 0.00 3.41
2112 2250 2.032620 CTCCTGGCCGTAGTATGACTT 58.967 52.381 0.00 0.00 0.00 3.01
2113 2251 2.431057 CTCCTGGCCGTAGTATGACTTT 59.569 50.000 0.00 0.00 0.00 2.66
2114 2252 2.835764 TCCTGGCCGTAGTATGACTTTT 59.164 45.455 0.00 0.00 0.00 2.27
2115 2253 3.118884 TCCTGGCCGTAGTATGACTTTTC 60.119 47.826 0.00 0.00 0.00 2.29
2116 2254 2.858344 CTGGCCGTAGTATGACTTTTCG 59.142 50.000 0.00 0.00 0.00 3.46
2117 2255 2.199236 GGCCGTAGTATGACTTTTCGG 58.801 52.381 0.00 10.84 38.11 4.30
2118 2256 1.591619 GCCGTAGTATGACTTTTCGGC 59.408 52.381 18.80 18.80 45.66 5.54
2119 2257 2.199236 CCGTAGTATGACTTTTCGGCC 58.801 52.381 0.00 0.00 32.61 6.13
2120 2258 2.417651 CCGTAGTATGACTTTTCGGCCA 60.418 50.000 2.24 0.00 32.61 5.36
2121 2259 2.601763 CGTAGTATGACTTTTCGGCCAC 59.398 50.000 2.24 0.00 0.00 5.01
2122 2260 2.851263 AGTATGACTTTTCGGCCACA 57.149 45.000 2.24 0.00 0.00 4.17
2123 2261 2.423577 AGTATGACTTTTCGGCCACAC 58.576 47.619 2.24 0.00 0.00 3.82
2124 2262 2.147958 GTATGACTTTTCGGCCACACA 58.852 47.619 2.24 0.00 0.00 3.72
2125 2263 1.909700 ATGACTTTTCGGCCACACAT 58.090 45.000 2.24 0.00 0.00 3.21
2126 2264 2.552599 TGACTTTTCGGCCACACATA 57.447 45.000 2.24 0.00 0.00 2.29
2127 2265 2.422597 TGACTTTTCGGCCACACATAG 58.577 47.619 2.24 0.00 0.00 2.23
2128 2266 1.737793 GACTTTTCGGCCACACATAGG 59.262 52.381 2.24 0.00 0.00 2.57
2134 2272 3.813596 GCCACACATAGGCCGAAG 58.186 61.111 0.00 0.00 46.50 3.79
2135 2273 1.078426 GCCACACATAGGCCGAAGT 60.078 57.895 0.00 0.00 46.50 3.01
2136 2274 0.177141 GCCACACATAGGCCGAAGTA 59.823 55.000 0.00 0.00 46.50 2.24
2137 2275 1.806623 GCCACACATAGGCCGAAGTAG 60.807 57.143 0.00 0.00 46.50 2.57
2138 2276 1.754803 CCACACATAGGCCGAAGTAGA 59.245 52.381 0.00 0.00 0.00 2.59
2139 2277 2.167693 CCACACATAGGCCGAAGTAGAA 59.832 50.000 0.00 0.00 0.00 2.10
2140 2278 3.187700 CACACATAGGCCGAAGTAGAAC 58.812 50.000 0.00 0.00 0.00 3.01
2141 2279 3.097614 ACACATAGGCCGAAGTAGAACT 58.902 45.455 0.00 0.00 0.00 3.01
2142 2280 3.514309 ACACATAGGCCGAAGTAGAACTT 59.486 43.478 0.00 0.00 41.95 2.66
2143 2281 4.020485 ACACATAGGCCGAAGTAGAACTTT 60.020 41.667 0.00 0.00 38.80 2.66
2144 2282 4.935808 CACATAGGCCGAAGTAGAACTTTT 59.064 41.667 0.00 0.00 38.80 2.27
2145 2283 5.411669 CACATAGGCCGAAGTAGAACTTTTT 59.588 40.000 0.00 0.00 38.80 1.94
2146 2284 5.411669 ACATAGGCCGAAGTAGAACTTTTTG 59.588 40.000 0.00 0.00 38.80 2.44
2147 2285 3.146847 AGGCCGAAGTAGAACTTTTTGG 58.853 45.455 0.00 0.00 38.80 3.28
2148 2286 2.882761 GGCCGAAGTAGAACTTTTTGGT 59.117 45.455 0.00 0.00 38.80 3.67
2149 2287 3.058432 GGCCGAAGTAGAACTTTTTGGTC 60.058 47.826 0.00 0.00 38.80 4.02
2150 2288 3.562557 GCCGAAGTAGAACTTTTTGGTCA 59.437 43.478 0.00 0.00 38.80 4.02
2151 2289 4.035909 GCCGAAGTAGAACTTTTTGGTCAA 59.964 41.667 0.00 0.00 38.80 3.18
2152 2290 5.748592 CCGAAGTAGAACTTTTTGGTCAAG 58.251 41.667 0.00 0.00 38.80 3.02
2153 2291 5.296035 CCGAAGTAGAACTTTTTGGTCAAGT 59.704 40.000 0.00 0.00 38.80 3.16
2154 2292 6.183360 CCGAAGTAGAACTTTTTGGTCAAGTT 60.183 38.462 0.00 0.00 45.28 2.66
2155 2293 7.248437 CGAAGTAGAACTTTTTGGTCAAGTTT 58.752 34.615 0.00 0.00 43.16 2.66
2156 2294 7.753580 CGAAGTAGAACTTTTTGGTCAAGTTTT 59.246 33.333 0.00 0.00 43.16 2.43
2157 2295 8.757164 AAGTAGAACTTTTTGGTCAAGTTTTG 57.243 30.769 0.00 0.00 43.16 2.44
2158 2296 7.320399 AGTAGAACTTTTTGGTCAAGTTTTGG 58.680 34.615 0.00 0.00 43.16 3.28
2159 2297 4.935205 AGAACTTTTTGGTCAAGTTTTGGC 59.065 37.500 0.00 0.00 43.16 4.52
2165 2303 2.812358 GGTCAAGTTTTGGCCGAAAT 57.188 45.000 21.20 3.47 46.80 2.17
2166 2304 3.926821 GGTCAAGTTTTGGCCGAAATA 57.073 42.857 21.20 5.21 46.80 1.40
2167 2305 3.833442 GGTCAAGTTTTGGCCGAAATAG 58.167 45.455 21.20 13.55 46.80 1.73
2168 2306 3.504520 GGTCAAGTTTTGGCCGAAATAGA 59.495 43.478 21.20 15.45 46.80 1.98
2169 2307 4.473199 GTCAAGTTTTGGCCGAAATAGAC 58.527 43.478 21.20 21.59 0.00 2.59
2170 2308 4.215613 GTCAAGTTTTGGCCGAAATAGACT 59.784 41.667 25.47 16.74 0.00 3.24
2171 2309 4.825085 TCAAGTTTTGGCCGAAATAGACTT 59.175 37.500 21.20 16.54 0.00 3.01
2172 2310 5.300792 TCAAGTTTTGGCCGAAATAGACTTT 59.699 36.000 21.20 6.88 0.00 2.66
2173 2311 5.784578 AGTTTTGGCCGAAATAGACTTTT 57.215 34.783 21.20 0.00 0.00 2.27
2174 2312 6.156748 AGTTTTGGCCGAAATAGACTTTTT 57.843 33.333 21.20 0.00 0.00 1.94
2175 2313 5.983118 AGTTTTGGCCGAAATAGACTTTTTG 59.017 36.000 21.20 0.00 0.00 2.44
2176 2314 4.513198 TTGGCCGAAATAGACTTTTTGG 57.487 40.909 0.00 10.04 41.37 3.28
2177 2315 3.492337 TGGCCGAAATAGACTTTTTGGT 58.508 40.909 0.00 0.00 40.78 3.67
2178 2316 3.504520 TGGCCGAAATAGACTTTTTGGTC 59.495 43.478 0.00 11.26 42.68 4.02
2179 2317 3.504520 GGCCGAAATAGACTTTTTGGTCA 59.495 43.478 12.47 0.00 42.16 4.02
2180 2318 4.022676 GGCCGAAATAGACTTTTTGGTCAA 60.023 41.667 12.47 0.00 42.16 3.18
2181 2319 5.154222 GCCGAAATAGACTTTTTGGTCAAG 58.846 41.667 13.50 0.00 40.78 3.02
2182 2320 5.278315 GCCGAAATAGACTTTTTGGTCAAGT 60.278 40.000 13.50 0.00 40.78 3.16
2183 2321 6.142817 CCGAAATAGACTTTTTGGTCAAGTG 58.857 40.000 0.00 0.00 38.57 3.16
2184 2322 6.238648 CCGAAATAGACTTTTTGGTCAAGTGT 60.239 38.462 0.00 0.00 38.57 3.55
2185 2323 7.041644 CCGAAATAGACTTTTTGGTCAAGTGTA 60.042 37.037 0.00 0.00 38.57 2.90
2186 2324 8.009974 CGAAATAGACTTTTTGGTCAAGTGTAG 58.990 37.037 0.00 0.00 34.49 2.74
2187 2325 7.745620 AATAGACTTTTTGGTCAAGTGTAGG 57.254 36.000 0.00 0.00 34.49 3.18
2188 2326 3.883489 AGACTTTTTGGTCAAGTGTAGGC 59.117 43.478 0.00 0.00 38.57 3.93
2189 2327 2.956333 ACTTTTTGGTCAAGTGTAGGCC 59.044 45.455 0.00 0.00 33.04 5.19
2190 2328 1.600023 TTTTGGTCAAGTGTAGGCCG 58.400 50.000 0.00 0.00 0.00 6.13
2191 2329 0.759959 TTTGGTCAAGTGTAGGCCGA 59.240 50.000 0.00 0.00 0.00 5.54
2192 2330 0.759959 TTGGTCAAGTGTAGGCCGAA 59.240 50.000 0.00 0.00 0.00 4.30
2193 2331 0.759959 TGGTCAAGTGTAGGCCGAAA 59.240 50.000 0.00 0.00 0.00 3.46
2194 2332 1.141254 TGGTCAAGTGTAGGCCGAAAA 59.859 47.619 0.00 0.00 0.00 2.29
2195 2333 1.804748 GGTCAAGTGTAGGCCGAAAAG 59.195 52.381 0.00 0.00 0.00 2.27
2196 2334 2.490991 GTCAAGTGTAGGCCGAAAAGT 58.509 47.619 0.00 0.00 0.00 2.66
2197 2335 3.555586 GGTCAAGTGTAGGCCGAAAAGTA 60.556 47.826 0.00 0.00 0.00 2.24
2198 2336 3.431233 GTCAAGTGTAGGCCGAAAAGTAC 59.569 47.826 0.00 0.00 0.00 2.73
2199 2337 3.322828 TCAAGTGTAGGCCGAAAAGTACT 59.677 43.478 0.00 0.00 0.00 2.73
2200 2338 4.062991 CAAGTGTAGGCCGAAAAGTACTT 58.937 43.478 1.12 1.12 0.00 2.24
2201 2339 4.347360 AGTGTAGGCCGAAAAGTACTTT 57.653 40.909 15.22 15.22 0.00 2.66
2202 2340 4.711399 AGTGTAGGCCGAAAAGTACTTTT 58.289 39.130 29.12 29.12 44.59 2.27
2203 2341 5.128205 AGTGTAGGCCGAAAAGTACTTTTT 58.872 37.500 29.26 17.98 42.26 1.94
2220 2358 3.410631 TTTTTGTCTCATGTAGGCCGA 57.589 42.857 0.00 0.00 0.00 5.54
2221 2359 3.410631 TTTTGTCTCATGTAGGCCGAA 57.589 42.857 0.00 0.00 0.00 4.30
2222 2360 2.672961 TTGTCTCATGTAGGCCGAAG 57.327 50.000 0.00 0.00 0.00 3.79
2223 2361 1.557099 TGTCTCATGTAGGCCGAAGT 58.443 50.000 0.00 0.00 0.00 3.01
2224 2362 1.899814 TGTCTCATGTAGGCCGAAGTT 59.100 47.619 0.00 0.00 0.00 2.66
2225 2363 2.271800 GTCTCATGTAGGCCGAAGTTG 58.728 52.381 0.00 0.00 0.00 3.16
2226 2364 1.009829 CTCATGTAGGCCGAAGTTGC 58.990 55.000 0.00 0.00 0.00 4.17
2227 2365 0.323302 TCATGTAGGCCGAAGTTGCA 59.677 50.000 0.00 0.00 0.00 4.08
2228 2366 1.065491 TCATGTAGGCCGAAGTTGCAT 60.065 47.619 0.00 0.00 0.00 3.96
2229 2367 1.064505 CATGTAGGCCGAAGTTGCATG 59.935 52.381 5.78 5.78 0.00 4.06
2230 2368 0.676466 TGTAGGCCGAAGTTGCATGG 60.676 55.000 0.00 0.00 0.00 3.66
2231 2369 1.748879 TAGGCCGAAGTTGCATGGC 60.749 57.895 0.00 6.03 46.82 4.40
2232 2370 2.196997 TAGGCCGAAGTTGCATGGCT 62.197 55.000 0.00 6.37 46.72 4.75
2233 2371 2.486966 GCCGAAGTTGCATGGCTC 59.513 61.111 0.00 0.00 44.16 4.70
2234 2372 2.334946 GCCGAAGTTGCATGGCTCA 61.335 57.895 0.00 0.00 44.16 4.26
2235 2373 1.660560 GCCGAAGTTGCATGGCTCAT 61.661 55.000 0.00 0.00 44.16 2.90
2236 2374 1.667236 CCGAAGTTGCATGGCTCATA 58.333 50.000 0.00 0.00 0.00 2.15
2237 2375 1.331756 CCGAAGTTGCATGGCTCATAC 59.668 52.381 0.00 0.00 0.00 2.39
2238 2376 2.009051 CGAAGTTGCATGGCTCATACA 58.991 47.619 0.00 0.00 0.00 2.29
2239 2377 2.419673 CGAAGTTGCATGGCTCATACAA 59.580 45.455 0.00 0.00 0.00 2.41
2240 2378 3.065786 CGAAGTTGCATGGCTCATACAAT 59.934 43.478 0.00 0.00 31.09 2.71
2241 2379 4.273235 CGAAGTTGCATGGCTCATACAATA 59.727 41.667 0.00 0.00 31.09 1.90
2242 2380 5.505173 AAGTTGCATGGCTCATACAATAC 57.495 39.130 0.00 0.00 31.09 1.89
2243 2381 4.525996 AGTTGCATGGCTCATACAATACA 58.474 39.130 0.00 0.00 31.09 2.29
2244 2382 4.336433 AGTTGCATGGCTCATACAATACAC 59.664 41.667 0.00 0.00 31.09 2.90
2245 2383 4.155063 TGCATGGCTCATACAATACACT 57.845 40.909 0.00 0.00 0.00 3.55
2246 2384 3.878699 TGCATGGCTCATACAATACACTG 59.121 43.478 0.00 0.00 0.00 3.66
2247 2385 4.129380 GCATGGCTCATACAATACACTGA 58.871 43.478 0.00 0.00 0.00 3.41
2248 2386 4.576053 GCATGGCTCATACAATACACTGAA 59.424 41.667 0.00 0.00 0.00 3.02
2249 2387 5.066375 GCATGGCTCATACAATACACTGAAA 59.934 40.000 0.00 0.00 0.00 2.69
2250 2388 6.238842 GCATGGCTCATACAATACACTGAAAT 60.239 38.462 0.00 0.00 0.00 2.17
2251 2389 6.682423 TGGCTCATACAATACACTGAAATG 57.318 37.500 0.00 0.00 0.00 2.32
2252 2390 6.179756 TGGCTCATACAATACACTGAAATGT 58.820 36.000 0.00 0.00 36.56 2.71
2253 2391 7.334858 TGGCTCATACAATACACTGAAATGTA 58.665 34.615 0.00 0.00 39.35 2.29
2254 2392 7.992608 TGGCTCATACAATACACTGAAATGTAT 59.007 33.333 0.00 0.00 45.69 2.29
2263 2401 5.296813 ACACTGAAATGTATTTTCTCGCC 57.703 39.130 0.42 0.00 43.50 5.54
2264 2402 4.759693 ACACTGAAATGTATTTTCTCGCCA 59.240 37.500 0.42 0.00 43.50 5.69
2265 2403 5.088739 CACTGAAATGTATTTTCTCGCCAC 58.911 41.667 0.42 0.00 43.50 5.01
2266 2404 4.156008 ACTGAAATGTATTTTCTCGCCACC 59.844 41.667 0.42 0.00 43.50 4.61
2267 2405 3.442273 TGAAATGTATTTTCTCGCCACCC 59.558 43.478 0.42 0.00 43.50 4.61
2268 2406 1.663695 ATGTATTTTCTCGCCACCCG 58.336 50.000 0.00 0.00 38.61 5.28
2269 2407 0.322322 TGTATTTTCTCGCCACCCGT 59.678 50.000 0.00 0.00 38.35 5.28
2270 2408 1.270947 TGTATTTTCTCGCCACCCGTT 60.271 47.619 0.00 0.00 38.35 4.44
2271 2409 1.808343 GTATTTTCTCGCCACCCGTTT 59.192 47.619 0.00 0.00 38.35 3.60
2272 2410 0.879090 ATTTTCTCGCCACCCGTTTC 59.121 50.000 0.00 0.00 38.35 2.78
2273 2411 1.167781 TTTTCTCGCCACCCGTTTCC 61.168 55.000 0.00 0.00 38.35 3.13
2274 2412 2.047213 TTTCTCGCCACCCGTTTCCT 62.047 55.000 0.00 0.00 38.35 3.36
2275 2413 2.725203 TTCTCGCCACCCGTTTCCTG 62.725 60.000 0.00 0.00 38.35 3.86
2278 2416 4.966787 GCCACCCGTTTCCTGCCA 62.967 66.667 0.00 0.00 0.00 4.92
2279 2417 2.203422 CCACCCGTTTCCTGCCAA 60.203 61.111 0.00 0.00 0.00 4.52
2280 2418 2.561037 CCACCCGTTTCCTGCCAAC 61.561 63.158 0.00 0.00 0.00 3.77
2281 2419 2.203437 ACCCGTTTCCTGCCAACC 60.203 61.111 0.00 0.00 0.00 3.77
2282 2420 2.989253 CCCGTTTCCTGCCAACCC 60.989 66.667 0.00 0.00 0.00 4.11
2283 2421 2.989253 CCGTTTCCTGCCAACCCC 60.989 66.667 0.00 0.00 0.00 4.95
2284 2422 2.115266 CGTTTCCTGCCAACCCCT 59.885 61.111 0.00 0.00 0.00 4.79
2285 2423 1.530655 CGTTTCCTGCCAACCCCTT 60.531 57.895 0.00 0.00 0.00 3.95
2286 2424 1.524008 CGTTTCCTGCCAACCCCTTC 61.524 60.000 0.00 0.00 0.00 3.46
2287 2425 1.155155 TTTCCTGCCAACCCCTTCC 59.845 57.895 0.00 0.00 0.00 3.46
2288 2426 2.380571 TTTCCTGCCAACCCCTTCCC 62.381 60.000 0.00 0.00 0.00 3.97
2289 2427 4.740822 CCTGCCAACCCCTTCCCG 62.741 72.222 0.00 0.00 0.00 5.14
2293 2431 4.060667 CCAACCCCTTCCCGCCAT 62.061 66.667 0.00 0.00 0.00 4.40
2294 2432 2.685534 CCAACCCCTTCCCGCCATA 61.686 63.158 0.00 0.00 0.00 2.74
2295 2433 1.536676 CAACCCCTTCCCGCCATAT 59.463 57.895 0.00 0.00 0.00 1.78
2296 2434 0.823356 CAACCCCTTCCCGCCATATG 60.823 60.000 0.00 0.00 0.00 1.78
2297 2435 1.286305 AACCCCTTCCCGCCATATGT 61.286 55.000 1.24 0.00 0.00 2.29
2298 2436 1.286305 ACCCCTTCCCGCCATATGTT 61.286 55.000 1.24 0.00 0.00 2.71
2299 2437 0.537371 CCCCTTCCCGCCATATGTTC 60.537 60.000 1.24 0.00 0.00 3.18
2300 2438 0.537371 CCCTTCCCGCCATATGTTCC 60.537 60.000 1.24 0.00 0.00 3.62
2301 2439 0.537371 CCTTCCCGCCATATGTTCCC 60.537 60.000 1.24 0.00 0.00 3.97
2302 2440 0.884704 CTTCCCGCCATATGTTCCCG 60.885 60.000 1.24 0.00 0.00 5.14
2303 2441 2.951475 TTCCCGCCATATGTTCCCGC 62.951 60.000 1.24 0.00 0.00 6.13
2304 2442 2.978010 CCGCCATATGTTCCCGCC 60.978 66.667 1.24 0.00 0.00 6.13
2305 2443 2.203139 CGCCATATGTTCCCGCCA 60.203 61.111 1.24 0.00 0.00 5.69
2306 2444 2.542907 CGCCATATGTTCCCGCCAC 61.543 63.158 1.24 0.00 0.00 5.01
2307 2445 2.193536 GCCATATGTTCCCGCCACC 61.194 63.158 1.24 0.00 0.00 4.61
2308 2446 1.528309 CCATATGTTCCCGCCACCC 60.528 63.158 1.24 0.00 0.00 4.61
2309 2447 1.891919 CATATGTTCCCGCCACCCG 60.892 63.158 0.00 0.00 0.00 5.28
2310 2448 2.372074 ATATGTTCCCGCCACCCGT 61.372 57.895 0.00 0.00 34.38 5.28
2311 2449 1.917336 ATATGTTCCCGCCACCCGTT 61.917 55.000 0.00 0.00 34.38 4.44
2312 2450 2.127027 TATGTTCCCGCCACCCGTTT 62.127 55.000 0.00 0.00 34.38 3.60
2313 2451 3.359523 GTTCCCGCCACCCGTTTC 61.360 66.667 0.00 0.00 34.38 2.78
2314 2452 4.646877 TTCCCGCCACCCGTTTCC 62.647 66.667 0.00 0.00 34.38 3.13
2320 2458 4.958897 CCACCCGTTTCCCGCCAA 62.959 66.667 0.00 0.00 34.38 4.52
2321 2459 2.675075 CACCCGTTTCCCGCCAAT 60.675 61.111 0.00 0.00 34.38 3.16
2322 2460 2.360726 ACCCGTTTCCCGCCAATC 60.361 61.111 0.00 0.00 34.38 2.67
2323 2461 3.138128 CCCGTTTCCCGCCAATCC 61.138 66.667 0.00 0.00 34.38 3.01
2324 2462 3.138128 CCGTTTCCCGCCAATCCC 61.138 66.667 0.00 0.00 34.38 3.85
2325 2463 2.045340 CGTTTCCCGCCAATCCCT 60.045 61.111 0.00 0.00 0.00 4.20
2326 2464 1.677633 CGTTTCCCGCCAATCCCTT 60.678 57.895 0.00 0.00 0.00 3.95
2327 2465 1.654023 CGTTTCCCGCCAATCCCTTC 61.654 60.000 0.00 0.00 0.00 3.46
2328 2466 1.000145 TTTCCCGCCAATCCCTTCC 60.000 57.895 0.00 0.00 0.00 3.46
2329 2467 2.508407 TTTCCCGCCAATCCCTTCCC 62.508 60.000 0.00 0.00 0.00 3.97
2330 2468 4.875713 CCCGCCAATCCCTTCCCG 62.876 72.222 0.00 0.00 0.00 5.14
2333 2471 4.129148 GCCAATCCCTTCCCGCCT 62.129 66.667 0.00 0.00 0.00 5.52
2334 2472 2.683475 CCAATCCCTTCCCGCCTT 59.317 61.111 0.00 0.00 0.00 4.35
2335 2473 1.919771 CCAATCCCTTCCCGCCTTA 59.080 57.895 0.00 0.00 0.00 2.69
2336 2474 0.478507 CCAATCCCTTCCCGCCTTAT 59.521 55.000 0.00 0.00 0.00 1.73
2337 2475 1.133482 CCAATCCCTTCCCGCCTTATT 60.133 52.381 0.00 0.00 0.00 1.40
2338 2476 2.666317 CAATCCCTTCCCGCCTTATTT 58.334 47.619 0.00 0.00 0.00 1.40
2339 2477 3.031013 CAATCCCTTCCCGCCTTATTTT 58.969 45.455 0.00 0.00 0.00 1.82
2340 2478 2.430248 TCCCTTCCCGCCTTATTTTC 57.570 50.000 0.00 0.00 0.00 2.29
2341 2479 1.064240 TCCCTTCCCGCCTTATTTTCC 60.064 52.381 0.00 0.00 0.00 3.13
2342 2480 1.399714 CCTTCCCGCCTTATTTTCCC 58.600 55.000 0.00 0.00 0.00 3.97
2343 2481 1.021968 CTTCCCGCCTTATTTTCCCG 58.978 55.000 0.00 0.00 0.00 5.14
2344 2482 1.033202 TTCCCGCCTTATTTTCCCGC 61.033 55.000 0.00 0.00 0.00 6.13
2345 2483 2.486663 CCCGCCTTATTTTCCCGCC 61.487 63.158 0.00 0.00 0.00 6.13
2346 2484 1.751162 CCGCCTTATTTTCCCGCCA 60.751 57.895 0.00 0.00 0.00 5.69
2347 2485 1.106944 CCGCCTTATTTTCCCGCCAT 61.107 55.000 0.00 0.00 0.00 4.40
2348 2486 1.600023 CGCCTTATTTTCCCGCCATA 58.400 50.000 0.00 0.00 0.00 2.74
2349 2487 1.265905 CGCCTTATTTTCCCGCCATAC 59.734 52.381 0.00 0.00 0.00 2.39
2350 2488 1.611977 GCCTTATTTTCCCGCCATACC 59.388 52.381 0.00 0.00 0.00 2.73
2351 2489 1.877443 CCTTATTTTCCCGCCATACCG 59.123 52.381 0.00 0.00 0.00 4.02
2352 2490 1.265905 CTTATTTTCCCGCCATACCGC 59.734 52.381 0.00 0.00 0.00 5.68
2353 2491 0.180642 TATTTTCCCGCCATACCGCA 59.819 50.000 0.00 0.00 0.00 5.69
2354 2492 1.101049 ATTTTCCCGCCATACCGCAG 61.101 55.000 0.00 0.00 0.00 5.18
2355 2493 2.472414 TTTTCCCGCCATACCGCAGT 62.472 55.000 0.00 0.00 0.00 4.40
2356 2494 2.472414 TTTCCCGCCATACCGCAGTT 62.472 55.000 0.00 0.00 0.00 3.16
2357 2495 1.615165 TTCCCGCCATACCGCAGTTA 61.615 55.000 0.00 0.00 0.00 2.24
2358 2496 1.153329 CCCGCCATACCGCAGTTAA 60.153 57.895 0.00 0.00 0.00 2.01
2359 2497 0.534203 CCCGCCATACCGCAGTTAAT 60.534 55.000 0.00 0.00 0.00 1.40
2360 2498 0.865769 CCGCCATACCGCAGTTAATC 59.134 55.000 0.00 0.00 0.00 1.75
2361 2499 1.540363 CCGCCATACCGCAGTTAATCT 60.540 52.381 0.00 0.00 0.00 2.40
2362 2500 2.210116 CGCCATACCGCAGTTAATCTT 58.790 47.619 0.00 0.00 0.00 2.40
2363 2501 2.612212 CGCCATACCGCAGTTAATCTTT 59.388 45.455 0.00 0.00 0.00 2.52
2364 2502 3.303132 CGCCATACCGCAGTTAATCTTTC 60.303 47.826 0.00 0.00 0.00 2.62
2365 2503 3.003378 GCCATACCGCAGTTAATCTTTCC 59.997 47.826 0.00 0.00 0.00 3.13
2366 2504 3.564225 CCATACCGCAGTTAATCTTTCCC 59.436 47.826 0.00 0.00 0.00 3.97
2367 2505 1.734163 ACCGCAGTTAATCTTTCCCG 58.266 50.000 0.00 0.00 0.00 5.14
2368 2506 0.377203 CCGCAGTTAATCTTTCCCGC 59.623 55.000 0.00 0.00 0.00 6.13
2369 2507 0.377203 CGCAGTTAATCTTTCCCGCC 59.623 55.000 0.00 0.00 0.00 6.13
2370 2508 1.459450 GCAGTTAATCTTTCCCGCCA 58.541 50.000 0.00 0.00 0.00 5.69
2371 2509 2.024414 GCAGTTAATCTTTCCCGCCAT 58.976 47.619 0.00 0.00 0.00 4.40
2372 2510 2.427095 GCAGTTAATCTTTCCCGCCATT 59.573 45.455 0.00 0.00 0.00 3.16
2373 2511 3.119137 GCAGTTAATCTTTCCCGCCATTT 60.119 43.478 0.00 0.00 0.00 2.32
2374 2512 4.620567 GCAGTTAATCTTTCCCGCCATTTT 60.621 41.667 0.00 0.00 0.00 1.82
2375 2513 5.102313 CAGTTAATCTTTCCCGCCATTTTC 58.898 41.667 0.00 0.00 0.00 2.29
2376 2514 5.016831 AGTTAATCTTTCCCGCCATTTTCT 58.983 37.500 0.00 0.00 0.00 2.52
2377 2515 5.125578 AGTTAATCTTTCCCGCCATTTTCTC 59.874 40.000 0.00 0.00 0.00 2.87
2378 2516 1.834188 TCTTTCCCGCCATTTTCTCC 58.166 50.000 0.00 0.00 0.00 3.71
2379 2517 1.354368 TCTTTCCCGCCATTTTCTCCT 59.646 47.619 0.00 0.00 0.00 3.69
2380 2518 1.745653 CTTTCCCGCCATTTTCTCCTC 59.254 52.381 0.00 0.00 0.00 3.71
2381 2519 0.991920 TTCCCGCCATTTTCTCCTCT 59.008 50.000 0.00 0.00 0.00 3.69
2382 2520 0.253044 TCCCGCCATTTTCTCCTCTG 59.747 55.000 0.00 0.00 0.00 3.35
2383 2521 0.035056 CCCGCCATTTTCTCCTCTGT 60.035 55.000 0.00 0.00 0.00 3.41
2384 2522 1.209504 CCCGCCATTTTCTCCTCTGTA 59.790 52.381 0.00 0.00 0.00 2.74
2385 2523 2.158755 CCCGCCATTTTCTCCTCTGTAT 60.159 50.000 0.00 0.00 0.00 2.29
2386 2524 3.134458 CCGCCATTTTCTCCTCTGTATC 58.866 50.000 0.00 0.00 0.00 2.24
2387 2525 3.181461 CCGCCATTTTCTCCTCTGTATCT 60.181 47.826 0.00 0.00 0.00 1.98
2388 2526 4.039245 CCGCCATTTTCTCCTCTGTATCTA 59.961 45.833 0.00 0.00 0.00 1.98
2389 2527 5.279708 CCGCCATTTTCTCCTCTGTATCTAT 60.280 44.000 0.00 0.00 0.00 1.98
2390 2528 6.071334 CCGCCATTTTCTCCTCTGTATCTATA 60.071 42.308 0.00 0.00 0.00 1.31
2391 2529 7.378966 CGCCATTTTCTCCTCTGTATCTATAA 58.621 38.462 0.00 0.00 0.00 0.98
2392 2530 7.872993 CGCCATTTTCTCCTCTGTATCTATAAA 59.127 37.037 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.667481 CTGTTTATTGCCATGCGGTTTG 59.333 45.455 0.00 0.00 33.28 2.93
1 2 2.560542 TCTGTTTATTGCCATGCGGTTT 59.439 40.909 0.00 0.00 33.28 3.27
36 37 2.411701 CCAGCCGCTTCATGCATG 59.588 61.111 21.07 21.07 43.06 4.06
42 43 2.300967 ATCCTTCCCAGCCGCTTCA 61.301 57.895 0.00 0.00 0.00 3.02
52 53 1.052617 GCCCTCTCTACATCCTTCCC 58.947 60.000 0.00 0.00 0.00 3.97
63 64 0.610232 GCACACCAAATGCCCTCTCT 60.610 55.000 0.00 0.00 37.08 3.10
180 181 4.275810 CATCACCCTCATCCTTGACAATT 58.724 43.478 0.00 0.00 0.00 2.32
203 204 2.442236 ATCATGGGTTTGGGCTACAG 57.558 50.000 0.00 0.00 0.00 2.74
347 351 0.321346 TGTCCACATGTGCTCGACAT 59.679 50.000 24.02 0.00 46.98 3.06
351 355 2.078849 TAGTTGTCCACATGTGCTCG 57.921 50.000 20.81 7.28 0.00 5.03
376 390 4.916983 AAGTGCACAACTCAAGCATTAA 57.083 36.364 21.04 0.00 38.56 1.40
421 436 5.817816 AGTAAATGTTGGTACAGAGCATAGC 59.182 40.000 0.00 0.00 42.39 2.97
545 563 1.577328 CGGGCGCATTCAGACAAGTT 61.577 55.000 10.83 0.00 0.00 2.66
546 564 2.034879 CGGGCGCATTCAGACAAGT 61.035 57.895 10.83 0.00 0.00 3.16
572 590 2.906939 TTCGAGAACGCGACCGGAA 61.907 57.895 15.93 10.06 40.42 4.30
586 604 6.884832 ACAAATCTGACCCTTATATGTTCGA 58.115 36.000 0.00 0.00 0.00 3.71
611 630 1.681793 GAGCATCTACAGCCGGACTTA 59.318 52.381 5.05 0.00 0.00 2.24
634 653 3.087781 ACTCACTCGGTTCCTAAGTACC 58.912 50.000 0.00 0.00 0.00 3.34
635 654 6.765512 ACTATACTCACTCGGTTCCTAAGTAC 59.234 42.308 0.00 0.00 0.00 2.73
636 655 6.893583 ACTATACTCACTCGGTTCCTAAGTA 58.106 40.000 0.00 0.00 0.00 2.24
637 656 5.753716 ACTATACTCACTCGGTTCCTAAGT 58.246 41.667 0.00 0.00 0.00 2.24
638 657 7.982761 ATACTATACTCACTCGGTTCCTAAG 57.017 40.000 0.00 0.00 0.00 2.18
639 658 7.605691 GCTATACTATACTCACTCGGTTCCTAA 59.394 40.741 0.00 0.00 0.00 2.69
640 659 7.102346 GCTATACTATACTCACTCGGTTCCTA 58.898 42.308 0.00 0.00 0.00 2.94
641 660 5.939296 GCTATACTATACTCACTCGGTTCCT 59.061 44.000 0.00 0.00 0.00 3.36
642 661 5.163874 CGCTATACTATACTCACTCGGTTCC 60.164 48.000 0.00 0.00 0.00 3.62
643 662 5.636965 TCGCTATACTATACTCACTCGGTTC 59.363 44.000 0.00 0.00 0.00 3.62
644 663 5.545588 TCGCTATACTATACTCACTCGGTT 58.454 41.667 0.00 0.00 0.00 4.44
645 664 5.144692 TCGCTATACTATACTCACTCGGT 57.855 43.478 0.00 0.00 0.00 4.69
646 665 4.567558 CCTCGCTATACTATACTCACTCGG 59.432 50.000 0.00 0.00 0.00 4.63
647 666 4.567558 CCCTCGCTATACTATACTCACTCG 59.432 50.000 0.00 0.00 0.00 4.18
648 667 4.333372 GCCCTCGCTATACTATACTCACTC 59.667 50.000 0.00 0.00 0.00 3.51
649 668 4.019141 AGCCCTCGCTATACTATACTCACT 60.019 45.833 0.00 0.00 46.08 3.41
650 669 4.263435 AGCCCTCGCTATACTATACTCAC 58.737 47.826 0.00 0.00 46.08 3.51
672 691 7.013655 ACTCTAGTGTTTTAACCGACAGACTTA 59.986 37.037 0.00 0.00 0.00 2.24
748 773 2.435372 TGGCCAGACCATCCAAATAC 57.565 50.000 0.00 0.00 46.36 1.89
807 832 1.729131 GGGACGTTGCGCACATTTG 60.729 57.895 11.12 0.00 0.00 2.32
869 897 1.218316 CCTAACCGGTGCTCCAGAC 59.782 63.158 8.52 0.00 0.00 3.51
870 898 1.229082 ACCTAACCGGTGCTCCAGA 60.229 57.895 8.52 0.00 46.80 3.86
919 947 1.603678 GGCGCTGGGCAAATGATATTG 60.604 52.381 18.70 0.00 46.16 1.90
920 948 0.675633 GGCGCTGGGCAAATGATATT 59.324 50.000 18.70 0.00 46.16 1.28
930 958 1.153765 GAAATTTGAGGCGCTGGGC 60.154 57.895 7.64 8.35 42.51 5.36
932 960 2.533266 GAATGAAATTTGAGGCGCTGG 58.467 47.619 7.64 0.00 36.07 4.85
933 961 2.179589 CGAATGAAATTTGAGGCGCTG 58.820 47.619 7.64 0.00 40.26 5.18
934 962 1.468054 GCGAATGAAATTTGAGGCGCT 60.468 47.619 7.64 0.00 40.26 5.92
935 963 0.916581 GCGAATGAAATTTGAGGCGC 59.083 50.000 0.00 0.00 40.26 6.53
936 964 2.261037 TGCGAATGAAATTTGAGGCG 57.739 45.000 0.00 0.00 40.26 5.52
937 965 3.578688 AGTTGCGAATGAAATTTGAGGC 58.421 40.909 0.00 0.00 40.26 4.70
939 967 6.939551 AATGAGTTGCGAATGAAATTTGAG 57.060 33.333 0.00 0.00 40.26 3.02
940 968 7.107834 CAAATGAGTTGCGAATGAAATTTGA 57.892 32.000 0.00 0.00 40.26 2.69
957 985 0.518636 CCGGTGACTGTGCAAATGAG 59.481 55.000 0.00 0.00 0.00 2.90
961 989 0.813610 CAGACCGGTGACTGTGCAAA 60.814 55.000 14.63 0.00 30.91 3.68
962 990 1.227527 CAGACCGGTGACTGTGCAA 60.228 57.895 14.63 0.00 30.91 4.08
963 991 1.110518 TACAGACCGGTGACTGTGCA 61.111 55.000 29.72 14.64 45.07 4.57
966 994 0.959553 CAGTACAGACCGGTGACTGT 59.040 55.000 26.59 26.59 46.64 3.55
968 996 2.157738 GTACAGTACAGACCGGTGACT 58.842 52.381 14.63 7.06 0.00 3.41
969 997 1.200948 GGTACAGTACAGACCGGTGAC 59.799 57.143 14.63 4.40 0.00 3.67
970 998 1.074405 AGGTACAGTACAGACCGGTGA 59.926 52.381 14.63 0.00 38.35 4.02
971 999 1.201647 CAGGTACAGTACAGACCGGTG 59.798 57.143 14.63 0.00 38.35 4.94
972 1000 1.542492 CAGGTACAGTACAGACCGGT 58.458 55.000 6.92 6.92 38.35 5.28
974 1002 0.815734 CCCAGGTACAGTACAGACCG 59.184 60.000 12.89 0.00 38.35 4.79
975 1003 2.100989 CTCCCAGGTACAGTACAGACC 58.899 57.143 12.89 0.00 0.00 3.85
1010 1059 3.188048 GTGCTCATCCTTCTCACTGTTTG 59.812 47.826 0.00 0.00 0.00 2.93
1012 1061 2.611473 CGTGCTCATCCTTCTCACTGTT 60.611 50.000 0.00 0.00 0.00 3.16
1284 1336 0.457853 CGGAAGGCTCGACGAAATCA 60.458 55.000 0.00 0.00 0.00 2.57
1332 1384 2.281484 GCAGCAACCTTCCACGGA 60.281 61.111 0.00 0.00 0.00 4.69
1333 1385 2.281761 AGCAGCAACCTTCCACGG 60.282 61.111 0.00 0.00 0.00 4.94
1360 1415 1.205655 CGACAGGTCCACATCATCAGT 59.794 52.381 0.00 0.00 0.00 3.41
1480 1556 5.689514 CAGTCAGATTGATCGGAGAATACAC 59.310 44.000 0.00 0.00 43.58 2.90
1495 1576 6.525578 TCGGTAAGTACATTCAGTCAGATT 57.474 37.500 0.00 0.00 0.00 2.40
1544 1641 9.784680 TGAAACGAAGAGAGTAGTATATTTGAC 57.215 33.333 0.00 0.00 0.00 3.18
1556 1653 9.685828 GCTCTTATATTATGAAACGAAGAGAGT 57.314 33.333 11.81 0.00 40.44 3.24
1557 1654 9.906660 AGCTCTTATATTATGAAACGAAGAGAG 57.093 33.333 11.81 0.00 40.44 3.20
1588 1685 9.127277 GCTCTTATATTATGGTACCCACAAAAA 57.873 33.333 10.07 0.00 35.80 1.94
1589 1686 8.499406 AGCTCTTATATTATGGTACCCACAAAA 58.501 33.333 10.07 0.00 35.80 2.44
1590 1687 8.041143 AGCTCTTATATTATGGTACCCACAAA 57.959 34.615 10.07 0.00 35.80 2.83
1591 1688 7.626999 AGCTCTTATATTATGGTACCCACAA 57.373 36.000 10.07 0.62 35.80 3.33
1592 1689 7.291416 TCAAGCTCTTATATTATGGTACCCACA 59.709 37.037 10.07 0.00 35.80 4.17
1593 1690 7.603024 GTCAAGCTCTTATATTATGGTACCCAC 59.397 40.741 10.07 0.00 35.80 4.61
1594 1691 7.291416 TGTCAAGCTCTTATATTATGGTACCCA 59.709 37.037 10.07 0.00 38.19 4.51
1595 1692 7.603024 GTGTCAAGCTCTTATATTATGGTACCC 59.397 40.741 10.07 0.00 0.00 3.69
1596 1693 8.368668 AGTGTCAAGCTCTTATATTATGGTACC 58.631 37.037 4.43 4.43 0.00 3.34
1597 1694 9.197694 CAGTGTCAAGCTCTTATATTATGGTAC 57.802 37.037 0.00 0.00 0.00 3.34
1598 1695 7.872993 GCAGTGTCAAGCTCTTATATTATGGTA 59.127 37.037 0.00 0.00 0.00 3.25
1599 1696 6.708054 GCAGTGTCAAGCTCTTATATTATGGT 59.292 38.462 0.00 0.00 0.00 3.55
1600 1697 6.707608 TGCAGTGTCAAGCTCTTATATTATGG 59.292 38.462 0.00 0.00 0.00 2.74
1601 1698 7.225341 TGTGCAGTGTCAAGCTCTTATATTATG 59.775 37.037 0.00 0.00 0.00 1.90
1602 1699 7.275183 TGTGCAGTGTCAAGCTCTTATATTAT 58.725 34.615 0.00 0.00 0.00 1.28
1603 1700 6.639563 TGTGCAGTGTCAAGCTCTTATATTA 58.360 36.000 0.00 0.00 0.00 0.98
1604 1701 5.491070 TGTGCAGTGTCAAGCTCTTATATT 58.509 37.500 0.00 0.00 0.00 1.28
1605 1702 5.089970 TGTGCAGTGTCAAGCTCTTATAT 57.910 39.130 0.00 0.00 0.00 0.86
1606 1703 4.535526 TGTGCAGTGTCAAGCTCTTATA 57.464 40.909 0.00 0.00 0.00 0.98
1607 1704 3.407424 TGTGCAGTGTCAAGCTCTTAT 57.593 42.857 0.00 0.00 0.00 1.73
1608 1705 2.908688 TGTGCAGTGTCAAGCTCTTA 57.091 45.000 0.00 0.00 0.00 2.10
1609 1706 2.267174 ATGTGCAGTGTCAAGCTCTT 57.733 45.000 0.00 0.00 0.00 2.85
1610 1707 2.267174 AATGTGCAGTGTCAAGCTCT 57.733 45.000 0.00 0.00 0.00 4.09
1611 1708 3.070018 ACTAATGTGCAGTGTCAAGCTC 58.930 45.455 0.00 0.00 0.00 4.09
1612 1709 2.810274 CACTAATGTGCAGTGTCAAGCT 59.190 45.455 0.00 0.00 38.86 3.74
1613 1710 3.193157 CACTAATGTGCAGTGTCAAGC 57.807 47.619 0.00 0.00 38.86 4.01
1625 1722 4.575885 ACAGCCATTTCGTACACTAATGT 58.424 39.130 0.00 0.00 43.30 2.71
1626 1723 4.034048 GGACAGCCATTTCGTACACTAATG 59.966 45.833 0.00 0.00 0.00 1.90
1627 1724 4.189231 GGACAGCCATTTCGTACACTAAT 58.811 43.478 0.00 0.00 0.00 1.73
1643 1755 1.294780 CTGGACAGACAGGGACAGC 59.705 63.158 0.00 0.00 34.84 4.40
1645 1757 3.471620 GCTGGACAGACAGGGACA 58.528 61.111 3.00 0.00 38.90 4.02
1717 1842 2.671070 CGTTAAAAGGCACCTGCATTCC 60.671 50.000 0.00 0.00 44.88 3.01
1829 1966 3.569250 ACACAACACAGTTCAACAACC 57.431 42.857 0.00 0.00 32.22 3.77
1875 2012 4.640647 CCTCTAGTTTCAAGGCCATTTACC 59.359 45.833 5.01 0.00 0.00 2.85
1886 2023 4.164843 ACCAACTTGCCTCTAGTTTCAA 57.835 40.909 0.00 0.00 33.73 2.69
1966 2104 9.616156 TGGTATAGTTTCCGAAAATGCTATAAA 57.384 29.630 4.10 0.00 0.00 1.40
1967 2105 9.787435 ATGGTATAGTTTCCGAAAATGCTATAA 57.213 29.630 4.10 0.00 0.00 0.98
1968 2106 9.214957 CATGGTATAGTTTCCGAAAATGCTATA 57.785 33.333 4.10 5.22 0.00 1.31
1969 2107 7.936847 TCATGGTATAGTTTCCGAAAATGCTAT 59.063 33.333 4.10 6.05 0.00 2.97
1970 2108 7.276658 TCATGGTATAGTTTCCGAAAATGCTA 58.723 34.615 4.10 0.00 0.00 3.49
1971 2109 6.119536 TCATGGTATAGTTTCCGAAAATGCT 58.880 36.000 4.10 0.00 0.00 3.79
1972 2110 6.371809 TCATGGTATAGTTTCCGAAAATGC 57.628 37.500 4.10 0.00 0.00 3.56
1973 2111 9.236691 CAAATCATGGTATAGTTTCCGAAAATG 57.763 33.333 4.10 0.00 0.00 2.32
1974 2112 9.184523 TCAAATCATGGTATAGTTTCCGAAAAT 57.815 29.630 0.00 0.00 0.00 1.82
1975 2113 8.568676 TCAAATCATGGTATAGTTTCCGAAAA 57.431 30.769 0.00 0.00 0.00 2.29
1976 2114 8.746052 ATCAAATCATGGTATAGTTTCCGAAA 57.254 30.769 0.00 0.00 0.00 3.46
1977 2115 8.746052 AATCAAATCATGGTATAGTTTCCGAA 57.254 30.769 0.00 0.00 0.00 4.30
1978 2116 9.839817 TTAATCAAATCATGGTATAGTTTCCGA 57.160 29.630 0.00 0.00 0.00 4.55
1998 2136 8.455682 CGGGCTACTACTTTTGATTTTTAATCA 58.544 33.333 0.00 0.00 0.00 2.57
1999 2137 8.456471 ACGGGCTACTACTTTTGATTTTTAATC 58.544 33.333 0.00 0.00 0.00 1.75
2000 2138 8.344446 ACGGGCTACTACTTTTGATTTTTAAT 57.656 30.769 0.00 0.00 0.00 1.40
2001 2139 7.360269 CGACGGGCTACTACTTTTGATTTTTAA 60.360 37.037 0.00 0.00 0.00 1.52
2002 2140 6.091169 CGACGGGCTACTACTTTTGATTTTTA 59.909 38.462 0.00 0.00 0.00 1.52
2003 2141 5.106830 CGACGGGCTACTACTTTTGATTTTT 60.107 40.000 0.00 0.00 0.00 1.94
2004 2142 4.390909 CGACGGGCTACTACTTTTGATTTT 59.609 41.667 0.00 0.00 0.00 1.82
2005 2143 3.930848 CGACGGGCTACTACTTTTGATTT 59.069 43.478 0.00 0.00 0.00 2.17
2006 2144 3.518590 CGACGGGCTACTACTTTTGATT 58.481 45.455 0.00 0.00 0.00 2.57
2007 2145 2.159142 CCGACGGGCTACTACTTTTGAT 60.159 50.000 5.81 0.00 0.00 2.57
2008 2146 1.203052 CCGACGGGCTACTACTTTTGA 59.797 52.381 5.81 0.00 0.00 2.69
2009 2147 1.636988 CCGACGGGCTACTACTTTTG 58.363 55.000 5.81 0.00 0.00 2.44
2021 2159 4.227134 CCAGAGATGGCCGACGGG 62.227 72.222 17.22 0.00 0.00 5.28
2022 2160 4.227134 CCCAGAGATGGCCGACGG 62.227 72.222 10.29 10.29 0.00 4.79
2023 2161 4.899239 GCCCAGAGATGGCCGACG 62.899 72.222 0.00 0.00 43.33 5.12
2029 2167 0.390860 CTACTTCGGCCCAGAGATGG 59.609 60.000 0.00 0.00 0.00 3.51
2030 2168 0.390860 CCTACTTCGGCCCAGAGATG 59.609 60.000 0.00 0.00 0.00 2.90
2031 2169 0.261991 TCCTACTTCGGCCCAGAGAT 59.738 55.000 0.00 0.00 0.00 2.75
2032 2170 0.683504 GTCCTACTTCGGCCCAGAGA 60.684 60.000 0.00 0.00 0.00 3.10
2033 2171 0.684805 AGTCCTACTTCGGCCCAGAG 60.685 60.000 0.00 0.00 0.00 3.35
2034 2172 0.252103 AAGTCCTACTTCGGCCCAGA 60.252 55.000 0.00 0.00 31.77 3.86
2035 2173 0.613777 AAAGTCCTACTTCGGCCCAG 59.386 55.000 0.00 0.00 37.47 4.45
2036 2174 1.002773 GAAAAGTCCTACTTCGGCCCA 59.997 52.381 0.00 0.00 37.47 5.36
2037 2175 1.735386 GAAAAGTCCTACTTCGGCCC 58.265 55.000 0.00 0.00 37.47 5.80
2038 2176 1.356938 CGAAAAGTCCTACTTCGGCC 58.643 55.000 0.00 0.00 37.47 6.13
2041 2179 1.337447 TGGCCGAAAAGTCCTACTTCG 60.337 52.381 0.00 0.00 37.47 3.79
2042 2180 2.074576 GTGGCCGAAAAGTCCTACTTC 58.925 52.381 0.00 0.00 37.47 3.01
2043 2181 1.418637 TGTGGCCGAAAAGTCCTACTT 59.581 47.619 0.00 0.00 40.80 2.24
2044 2182 1.002087 CTGTGGCCGAAAAGTCCTACT 59.998 52.381 0.00 0.00 0.00 2.57
2045 2183 1.439679 CTGTGGCCGAAAAGTCCTAC 58.560 55.000 0.00 0.00 0.00 3.18
2046 2184 0.321298 GCTGTGGCCGAAAAGTCCTA 60.321 55.000 0.00 0.00 0.00 2.94
2047 2185 1.600916 GCTGTGGCCGAAAAGTCCT 60.601 57.895 0.00 0.00 0.00 3.85
2048 2186 1.172812 AAGCTGTGGCCGAAAAGTCC 61.173 55.000 0.00 0.00 39.73 3.85
2049 2187 0.040067 CAAGCTGTGGCCGAAAAGTC 60.040 55.000 0.00 0.00 39.73 3.01
2050 2188 1.455383 CCAAGCTGTGGCCGAAAAGT 61.455 55.000 0.00 0.00 41.72 2.66
2051 2189 1.286880 CCAAGCTGTGGCCGAAAAG 59.713 57.895 0.00 0.00 41.72 2.27
2052 2190 3.442441 CCAAGCTGTGGCCGAAAA 58.558 55.556 0.00 0.00 41.72 2.29
2060 2198 0.037326 TCTACTTCGGCCAAGCTGTG 60.037 55.000 2.24 0.00 35.17 3.66
2061 2199 0.247736 CTCTACTTCGGCCAAGCTGT 59.752 55.000 2.24 0.00 35.17 4.40
2062 2200 0.247736 ACTCTACTTCGGCCAAGCTG 59.752 55.000 2.24 2.93 35.17 4.24
2063 2201 0.977395 AACTCTACTTCGGCCAAGCT 59.023 50.000 2.24 0.22 35.17 3.74
2064 2202 1.809684 AAACTCTACTTCGGCCAAGC 58.190 50.000 2.24 0.00 35.17 4.01
2065 2203 2.412089 CGAAAACTCTACTTCGGCCAAG 59.588 50.000 2.24 8.48 40.52 3.61
2066 2204 2.409975 CGAAAACTCTACTTCGGCCAA 58.590 47.619 2.24 0.00 40.52 4.52
2067 2205 2.074547 CGAAAACTCTACTTCGGCCA 57.925 50.000 2.24 0.00 40.52 5.36
2071 2209 2.074547 TGGCCGAAAACTCTACTTCG 57.925 50.000 0.00 0.00 43.12 3.79
2072 2210 3.863041 AGATGGCCGAAAACTCTACTTC 58.137 45.455 0.00 0.00 0.00 3.01
2073 2211 3.369576 GGAGATGGCCGAAAACTCTACTT 60.370 47.826 0.00 0.00 0.00 2.24
2074 2212 2.168728 GGAGATGGCCGAAAACTCTACT 59.831 50.000 0.00 0.00 0.00 2.57
2075 2213 2.168728 AGGAGATGGCCGAAAACTCTAC 59.831 50.000 0.00 0.00 0.00 2.59
2076 2214 2.168521 CAGGAGATGGCCGAAAACTCTA 59.831 50.000 0.00 0.00 0.00 2.43
2077 2215 1.065854 CAGGAGATGGCCGAAAACTCT 60.066 52.381 0.00 0.00 0.00 3.24
2078 2216 1.373570 CAGGAGATGGCCGAAAACTC 58.626 55.000 0.00 2.12 0.00 3.01
2079 2217 0.035056 CCAGGAGATGGCCGAAAACT 60.035 55.000 0.00 0.00 43.83 2.66
2080 2218 2.482326 CCAGGAGATGGCCGAAAAC 58.518 57.895 0.00 0.00 43.83 2.43
2089 2227 2.029828 GTCATACTACGGCCAGGAGATG 60.030 54.545 12.95 11.32 33.99 2.90
2090 2228 2.158445 AGTCATACTACGGCCAGGAGAT 60.158 50.000 12.95 1.27 33.99 2.75
2091 2229 1.214673 AGTCATACTACGGCCAGGAGA 59.785 52.381 12.95 0.00 33.99 3.71
2092 2230 1.693627 AGTCATACTACGGCCAGGAG 58.306 55.000 2.24 4.18 36.66 3.69
2093 2231 2.154567 AAGTCATACTACGGCCAGGA 57.845 50.000 2.24 0.00 0.00 3.86
2094 2232 2.981859 AAAGTCATACTACGGCCAGG 57.018 50.000 2.24 0.00 0.00 4.45
2095 2233 2.858344 CGAAAAGTCATACTACGGCCAG 59.142 50.000 2.24 0.00 0.00 4.85
2096 2234 2.417651 CCGAAAAGTCATACTACGGCCA 60.418 50.000 2.24 0.00 34.72 5.36
2097 2235 2.199236 CCGAAAAGTCATACTACGGCC 58.801 52.381 0.00 0.00 34.72 6.13
2099 2237 2.199236 GGCCGAAAAGTCATACTACGG 58.801 52.381 0.00 0.00 40.09 4.02
2100 2238 2.601763 GTGGCCGAAAAGTCATACTACG 59.398 50.000 0.00 0.00 0.00 3.51
2101 2239 3.370061 GTGTGGCCGAAAAGTCATACTAC 59.630 47.826 0.00 0.00 0.00 2.73
2102 2240 3.007074 TGTGTGGCCGAAAAGTCATACTA 59.993 43.478 0.00 0.00 0.00 1.82
2103 2241 2.224426 TGTGTGGCCGAAAAGTCATACT 60.224 45.455 0.00 0.00 0.00 2.12
2104 2242 2.147958 TGTGTGGCCGAAAAGTCATAC 58.852 47.619 0.00 0.00 0.00 2.39
2105 2243 2.552599 TGTGTGGCCGAAAAGTCATA 57.447 45.000 0.00 0.00 0.00 2.15
2106 2244 1.909700 ATGTGTGGCCGAAAAGTCAT 58.090 45.000 0.00 0.00 0.00 3.06
2107 2245 2.422597 CTATGTGTGGCCGAAAAGTCA 58.577 47.619 0.00 0.00 0.00 3.41
2108 2246 1.737793 CCTATGTGTGGCCGAAAAGTC 59.262 52.381 0.00 0.00 0.00 3.01
2109 2247 1.821216 CCTATGTGTGGCCGAAAAGT 58.179 50.000 0.00 0.00 0.00 2.66
2110 2248 0.451783 GCCTATGTGTGGCCGAAAAG 59.548 55.000 0.00 0.00 44.32 2.27
2111 2249 2.562125 GCCTATGTGTGGCCGAAAA 58.438 52.632 0.00 0.00 44.32 2.29
2112 2250 4.312052 GCCTATGTGTGGCCGAAA 57.688 55.556 0.00 0.00 44.32 3.46
2118 2256 1.754803 TCTACTTCGGCCTATGTGTGG 59.245 52.381 0.00 0.00 0.00 4.17
2119 2257 3.119101 AGTTCTACTTCGGCCTATGTGTG 60.119 47.826 0.00 0.00 0.00 3.82
2120 2258 3.097614 AGTTCTACTTCGGCCTATGTGT 58.902 45.455 0.00 0.00 0.00 3.72
2121 2259 3.802948 AGTTCTACTTCGGCCTATGTG 57.197 47.619 0.00 0.00 0.00 3.21
2122 2260 4.820894 AAAGTTCTACTTCGGCCTATGT 57.179 40.909 0.00 0.26 37.47 2.29
2123 2261 5.163754 CCAAAAAGTTCTACTTCGGCCTATG 60.164 44.000 0.00 0.00 37.47 2.23
2124 2262 4.941873 CCAAAAAGTTCTACTTCGGCCTAT 59.058 41.667 0.00 0.00 37.47 2.57
2125 2263 4.202388 ACCAAAAAGTTCTACTTCGGCCTA 60.202 41.667 0.00 0.00 37.47 3.93
2126 2264 3.146847 CCAAAAAGTTCTACTTCGGCCT 58.853 45.455 0.00 0.00 37.47 5.19
2127 2265 2.882761 ACCAAAAAGTTCTACTTCGGCC 59.117 45.455 0.00 0.00 37.47 6.13
2128 2266 3.562557 TGACCAAAAAGTTCTACTTCGGC 59.437 43.478 0.00 0.00 37.47 5.54
2129 2267 5.296035 ACTTGACCAAAAAGTTCTACTTCGG 59.704 40.000 0.00 0.00 37.47 4.30
2130 2268 6.359480 ACTTGACCAAAAAGTTCTACTTCG 57.641 37.500 0.00 0.00 37.47 3.79
2131 2269 8.860128 CAAAACTTGACCAAAAAGTTCTACTTC 58.140 33.333 2.32 0.00 44.93 3.01
2132 2270 7.817478 CCAAAACTTGACCAAAAAGTTCTACTT 59.183 33.333 2.32 0.00 44.93 2.24
2133 2271 7.320399 CCAAAACTTGACCAAAAAGTTCTACT 58.680 34.615 2.32 0.00 44.93 2.57
2134 2272 6.035650 GCCAAAACTTGACCAAAAAGTTCTAC 59.964 38.462 2.32 0.00 44.93 2.59
2135 2273 6.103330 GCCAAAACTTGACCAAAAAGTTCTA 58.897 36.000 2.32 0.00 44.93 2.10
2136 2274 4.935205 GCCAAAACTTGACCAAAAAGTTCT 59.065 37.500 2.32 0.00 44.93 3.01
2137 2275 4.094294 GGCCAAAACTTGACCAAAAAGTTC 59.906 41.667 0.00 0.00 44.93 3.01
2139 2277 3.605634 GGCCAAAACTTGACCAAAAAGT 58.394 40.909 0.00 0.00 39.55 2.66
2140 2278 2.607180 CGGCCAAAACTTGACCAAAAAG 59.393 45.455 2.24 0.00 31.97 2.27
2141 2279 2.233922 TCGGCCAAAACTTGACCAAAAA 59.766 40.909 2.24 0.00 31.97 1.94
2142 2280 1.825474 TCGGCCAAAACTTGACCAAAA 59.175 42.857 2.24 0.00 31.97 2.44
2143 2281 1.475403 TCGGCCAAAACTTGACCAAA 58.525 45.000 2.24 0.00 31.97 3.28
2144 2282 1.475403 TTCGGCCAAAACTTGACCAA 58.525 45.000 2.24 0.00 31.97 3.67
2145 2283 1.475403 TTTCGGCCAAAACTTGACCA 58.525 45.000 2.24 0.00 31.97 4.02
2146 2284 2.812358 ATTTCGGCCAAAACTTGACC 57.188 45.000 2.24 0.00 0.00 4.02
2147 2285 4.215613 AGTCTATTTCGGCCAAAACTTGAC 59.784 41.667 2.24 6.73 0.00 3.18
2148 2286 4.394729 AGTCTATTTCGGCCAAAACTTGA 58.605 39.130 2.24 0.00 0.00 3.02
2149 2287 4.766404 AGTCTATTTCGGCCAAAACTTG 57.234 40.909 2.24 0.00 0.00 3.16
2150 2288 5.784578 AAAGTCTATTTCGGCCAAAACTT 57.215 34.783 2.24 6.92 0.00 2.66
2151 2289 5.784578 AAAAGTCTATTTCGGCCAAAACT 57.215 34.783 2.24 1.01 0.00 2.66
2152 2290 5.176774 CCAAAAAGTCTATTTCGGCCAAAAC 59.823 40.000 2.24 0.00 0.00 2.43
2153 2291 5.163395 ACCAAAAAGTCTATTTCGGCCAAAA 60.163 36.000 2.24 0.00 0.00 2.44
2154 2292 4.342665 ACCAAAAAGTCTATTTCGGCCAAA 59.657 37.500 2.24 2.92 0.00 3.28
2155 2293 3.892588 ACCAAAAAGTCTATTTCGGCCAA 59.107 39.130 2.24 0.00 0.00 4.52
2156 2294 3.492337 ACCAAAAAGTCTATTTCGGCCA 58.508 40.909 2.24 0.00 0.00 5.36
2157 2295 3.504520 TGACCAAAAAGTCTATTTCGGCC 59.495 43.478 0.00 0.00 37.66 6.13
2158 2296 4.759516 TGACCAAAAAGTCTATTTCGGC 57.240 40.909 0.00 0.00 37.66 5.54
2159 2297 6.142817 CACTTGACCAAAAAGTCTATTTCGG 58.857 40.000 0.00 0.00 35.70 4.30
2160 2298 6.725246 ACACTTGACCAAAAAGTCTATTTCG 58.275 36.000 0.00 0.00 35.70 3.46
2161 2299 8.290325 CCTACACTTGACCAAAAAGTCTATTTC 58.710 37.037 0.00 0.00 35.70 2.17
2162 2300 7.255486 GCCTACACTTGACCAAAAAGTCTATTT 60.255 37.037 0.00 0.00 35.70 1.40
2163 2301 6.206829 GCCTACACTTGACCAAAAAGTCTATT 59.793 38.462 0.00 0.00 35.70 1.73
2164 2302 5.705905 GCCTACACTTGACCAAAAAGTCTAT 59.294 40.000 0.00 0.00 35.70 1.98
2165 2303 5.061179 GCCTACACTTGACCAAAAAGTCTA 58.939 41.667 0.00 0.00 35.70 2.59
2166 2304 3.883489 GCCTACACTTGACCAAAAAGTCT 59.117 43.478 0.00 0.00 35.70 3.24
2167 2305 3.004419 GGCCTACACTTGACCAAAAAGTC 59.996 47.826 0.00 0.00 35.70 3.01
2168 2306 2.956333 GGCCTACACTTGACCAAAAAGT 59.044 45.455 0.00 0.00 38.40 2.66
2169 2307 2.031157 CGGCCTACACTTGACCAAAAAG 60.031 50.000 0.00 0.00 0.00 2.27
2170 2308 1.950909 CGGCCTACACTTGACCAAAAA 59.049 47.619 0.00 0.00 0.00 1.94
2171 2309 1.141254 TCGGCCTACACTTGACCAAAA 59.859 47.619 0.00 0.00 0.00 2.44
2172 2310 0.759959 TCGGCCTACACTTGACCAAA 59.240 50.000 0.00 0.00 0.00 3.28
2173 2311 0.759959 TTCGGCCTACACTTGACCAA 59.240 50.000 0.00 0.00 0.00 3.67
2174 2312 0.759959 TTTCGGCCTACACTTGACCA 59.240 50.000 0.00 0.00 0.00 4.02
2175 2313 1.804748 CTTTTCGGCCTACACTTGACC 59.195 52.381 0.00 0.00 0.00 4.02
2176 2314 2.490991 ACTTTTCGGCCTACACTTGAC 58.509 47.619 0.00 0.00 0.00 3.18
2177 2315 2.922740 ACTTTTCGGCCTACACTTGA 57.077 45.000 0.00 0.00 0.00 3.02
2178 2316 3.660865 AGTACTTTTCGGCCTACACTTG 58.339 45.455 0.00 0.00 0.00 3.16
2179 2317 4.347360 AAGTACTTTTCGGCCTACACTT 57.653 40.909 1.12 0.00 0.00 3.16
2180 2318 4.347360 AAAGTACTTTTCGGCCTACACT 57.653 40.909 15.22 0.00 0.00 3.55
2181 2319 5.428496 AAAAAGTACTTTTCGGCCTACAC 57.572 39.130 28.90 0.00 41.45 2.90
2200 2338 3.410631 TCGGCCTACATGAGACAAAAA 57.589 42.857 0.00 0.00 0.00 1.94
2201 2339 3.244422 ACTTCGGCCTACATGAGACAAAA 60.244 43.478 0.00 0.00 0.00 2.44
2202 2340 2.301870 ACTTCGGCCTACATGAGACAAA 59.698 45.455 0.00 0.00 0.00 2.83
2203 2341 1.899814 ACTTCGGCCTACATGAGACAA 59.100 47.619 0.00 0.00 0.00 3.18
2204 2342 1.557099 ACTTCGGCCTACATGAGACA 58.443 50.000 0.00 0.00 0.00 3.41
2205 2343 2.271800 CAACTTCGGCCTACATGAGAC 58.728 52.381 0.00 0.00 0.00 3.36
2206 2344 1.405526 GCAACTTCGGCCTACATGAGA 60.406 52.381 0.00 0.00 0.00 3.27
2207 2345 1.009829 GCAACTTCGGCCTACATGAG 58.990 55.000 0.00 0.00 0.00 2.90
2208 2346 0.323302 TGCAACTTCGGCCTACATGA 59.677 50.000 0.00 0.00 0.00 3.07
2209 2347 1.064505 CATGCAACTTCGGCCTACATG 59.935 52.381 0.00 0.00 0.00 3.21
2210 2348 1.382522 CATGCAACTTCGGCCTACAT 58.617 50.000 0.00 0.00 0.00 2.29
2211 2349 0.676466 CCATGCAACTTCGGCCTACA 60.676 55.000 0.00 0.00 0.00 2.74
2212 2350 1.993369 GCCATGCAACTTCGGCCTAC 61.993 60.000 0.00 0.00 38.67 3.18
2213 2351 1.748879 GCCATGCAACTTCGGCCTA 60.749 57.895 0.00 0.00 38.67 3.93
2214 2352 3.064324 GCCATGCAACTTCGGCCT 61.064 61.111 0.00 0.00 38.67 5.19
2215 2353 3.056313 GAGCCATGCAACTTCGGCC 62.056 63.158 9.89 0.00 46.08 6.13
2216 2354 1.660560 ATGAGCCATGCAACTTCGGC 61.661 55.000 0.00 0.00 45.23 5.54
2217 2355 1.331756 GTATGAGCCATGCAACTTCGG 59.668 52.381 0.00 0.00 0.00 4.30
2218 2356 2.009051 TGTATGAGCCATGCAACTTCG 58.991 47.619 0.00 0.00 33.87 3.79
2219 2357 4.644103 ATTGTATGAGCCATGCAACTTC 57.356 40.909 16.54 0.00 45.77 3.01
2220 2358 4.949238 TGTATTGTATGAGCCATGCAACTT 59.051 37.500 16.54 8.28 45.77 2.66
2221 2359 4.336433 GTGTATTGTATGAGCCATGCAACT 59.664 41.667 16.54 10.80 45.77 3.16
2222 2360 4.336433 AGTGTATTGTATGAGCCATGCAAC 59.664 41.667 16.54 9.55 45.77 4.17
2223 2361 4.336153 CAGTGTATTGTATGAGCCATGCAA 59.664 41.667 16.53 16.53 46.63 4.08
2224 2362 3.878699 CAGTGTATTGTATGAGCCATGCA 59.121 43.478 0.00 0.00 34.89 3.96
2225 2363 4.129380 TCAGTGTATTGTATGAGCCATGC 58.871 43.478 0.00 0.00 0.00 4.06
2226 2364 6.682423 TTTCAGTGTATTGTATGAGCCATG 57.318 37.500 0.00 0.00 0.00 3.66
2227 2365 6.830324 ACATTTCAGTGTATTGTATGAGCCAT 59.170 34.615 0.00 0.00 0.00 4.40
2228 2366 6.179756 ACATTTCAGTGTATTGTATGAGCCA 58.820 36.000 0.00 0.00 0.00 4.75
2229 2367 6.683974 ACATTTCAGTGTATTGTATGAGCC 57.316 37.500 0.00 0.00 0.00 4.70
2246 2384 3.486875 CGGGTGGCGAGAAAATACATTTC 60.487 47.826 0.00 0.00 46.45 2.17
2247 2385 2.422127 CGGGTGGCGAGAAAATACATTT 59.578 45.455 0.00 0.00 0.00 2.32
2248 2386 2.014128 CGGGTGGCGAGAAAATACATT 58.986 47.619 0.00 0.00 0.00 2.71
2249 2387 1.065709 ACGGGTGGCGAGAAAATACAT 60.066 47.619 0.00 0.00 0.00 2.29
2250 2388 0.322322 ACGGGTGGCGAGAAAATACA 59.678 50.000 0.00 0.00 0.00 2.29
2251 2389 1.445871 AACGGGTGGCGAGAAAATAC 58.554 50.000 0.00 0.00 0.00 1.89
2252 2390 2.078392 GAAACGGGTGGCGAGAAAATA 58.922 47.619 0.00 0.00 0.00 1.40
2253 2391 0.879090 GAAACGGGTGGCGAGAAAAT 59.121 50.000 0.00 0.00 0.00 1.82
2254 2392 1.167781 GGAAACGGGTGGCGAGAAAA 61.168 55.000 0.00 0.00 0.00 2.29
2255 2393 1.598685 GGAAACGGGTGGCGAGAAA 60.599 57.895 0.00 0.00 0.00 2.52
2256 2394 2.031465 GGAAACGGGTGGCGAGAA 59.969 61.111 0.00 0.00 0.00 2.87
2257 2395 2.920912 AGGAAACGGGTGGCGAGA 60.921 61.111 0.00 0.00 0.00 4.04
2258 2396 2.742372 CAGGAAACGGGTGGCGAG 60.742 66.667 0.00 0.00 0.00 5.03
2261 2399 4.966787 TGGCAGGAAACGGGTGGC 62.967 66.667 0.00 0.00 37.28 5.01
2262 2400 2.203422 TTGGCAGGAAACGGGTGG 60.203 61.111 0.00 0.00 0.00 4.61
2263 2401 2.561037 GGTTGGCAGGAAACGGGTG 61.561 63.158 0.00 0.00 0.00 4.61
2264 2402 2.203437 GGTTGGCAGGAAACGGGT 60.203 61.111 0.00 0.00 0.00 5.28
2265 2403 2.989253 GGGTTGGCAGGAAACGGG 60.989 66.667 0.00 0.00 0.00 5.28
2266 2404 2.989253 GGGGTTGGCAGGAAACGG 60.989 66.667 0.00 0.00 0.00 4.44
2267 2405 1.524008 GAAGGGGTTGGCAGGAAACG 61.524 60.000 0.00 0.00 0.00 3.60
2268 2406 1.185618 GGAAGGGGTTGGCAGGAAAC 61.186 60.000 0.00 0.00 0.00 2.78
2269 2407 1.155155 GGAAGGGGTTGGCAGGAAA 59.845 57.895 0.00 0.00 0.00 3.13
2270 2408 2.851045 GGAAGGGGTTGGCAGGAA 59.149 61.111 0.00 0.00 0.00 3.36
2271 2409 3.264845 GGGAAGGGGTTGGCAGGA 61.265 66.667 0.00 0.00 0.00 3.86
2272 2410 4.740822 CGGGAAGGGGTTGGCAGG 62.741 72.222 0.00 0.00 0.00 4.85
2276 2414 2.006805 ATATGGCGGGAAGGGGTTGG 62.007 60.000 0.00 0.00 0.00 3.77
2277 2415 0.823356 CATATGGCGGGAAGGGGTTG 60.823 60.000 0.00 0.00 0.00 3.77
2278 2416 1.286305 ACATATGGCGGGAAGGGGTT 61.286 55.000 7.80 0.00 0.00 4.11
2279 2417 1.286305 AACATATGGCGGGAAGGGGT 61.286 55.000 7.80 0.00 0.00 4.95
2280 2418 0.537371 GAACATATGGCGGGAAGGGG 60.537 60.000 7.80 0.00 0.00 4.79
2281 2419 0.537371 GGAACATATGGCGGGAAGGG 60.537 60.000 7.80 0.00 0.00 3.95
2282 2420 0.537371 GGGAACATATGGCGGGAAGG 60.537 60.000 7.80 0.00 0.00 3.46
2283 2421 0.884704 CGGGAACATATGGCGGGAAG 60.885 60.000 7.80 0.00 0.00 3.46
2284 2422 1.147376 CGGGAACATATGGCGGGAA 59.853 57.895 7.80 0.00 0.00 3.97
2285 2423 2.825982 CGGGAACATATGGCGGGA 59.174 61.111 7.80 0.00 0.00 5.14
2286 2424 2.978010 GCGGGAACATATGGCGGG 60.978 66.667 7.80 0.00 0.00 6.13
2287 2425 2.978010 GGCGGGAACATATGGCGG 60.978 66.667 7.80 0.00 0.00 6.13
2288 2426 2.203139 TGGCGGGAACATATGGCG 60.203 61.111 7.80 0.00 0.00 5.69
2289 2427 2.193536 GGTGGCGGGAACATATGGC 61.194 63.158 7.80 0.00 0.00 4.40
2290 2428 1.528309 GGGTGGCGGGAACATATGG 60.528 63.158 7.80 0.00 0.00 2.74
2291 2429 1.891919 CGGGTGGCGGGAACATATG 60.892 63.158 0.00 0.00 0.00 1.78
2292 2430 1.917336 AACGGGTGGCGGGAACATAT 61.917 55.000 0.00 0.00 0.00 1.78
2293 2431 2.127027 AAACGGGTGGCGGGAACATA 62.127 55.000 0.00 0.00 0.00 2.29
2294 2432 3.501040 AAACGGGTGGCGGGAACAT 62.501 57.895 0.00 0.00 0.00 2.71
2295 2433 4.192453 AAACGGGTGGCGGGAACA 62.192 61.111 0.00 0.00 0.00 3.18
2296 2434 3.359523 GAAACGGGTGGCGGGAAC 61.360 66.667 0.00 0.00 0.00 3.62
2297 2435 4.646877 GGAAACGGGTGGCGGGAA 62.647 66.667 0.00 0.00 0.00 3.97
2303 2441 4.958897 TTGGCGGGAAACGGGTGG 62.959 66.667 0.00 0.00 44.51 4.61
2304 2442 2.675075 ATTGGCGGGAAACGGGTG 60.675 61.111 0.00 0.00 44.51 4.61
2305 2443 2.360726 GATTGGCGGGAAACGGGT 60.361 61.111 0.00 0.00 44.51 5.28
2306 2444 3.138128 GGATTGGCGGGAAACGGG 61.138 66.667 0.00 0.00 44.51 5.28
2307 2445 3.138128 GGGATTGGCGGGAAACGG 61.138 66.667 0.00 0.00 44.51 4.44
2309 2447 1.320344 GGAAGGGATTGGCGGGAAAC 61.320 60.000 0.00 0.00 0.00 2.78
2310 2448 1.000145 GGAAGGGATTGGCGGGAAA 60.000 57.895 0.00 0.00 0.00 3.13
2311 2449 2.680965 GGAAGGGATTGGCGGGAA 59.319 61.111 0.00 0.00 0.00 3.97
2312 2450 3.416880 GGGAAGGGATTGGCGGGA 61.417 66.667 0.00 0.00 0.00 5.14
2313 2451 4.875713 CGGGAAGGGATTGGCGGG 62.876 72.222 0.00 0.00 0.00 6.13
2316 2454 2.279037 TAAGGCGGGAAGGGATTGGC 62.279 60.000 0.00 0.00 0.00 4.52
2317 2455 0.478507 ATAAGGCGGGAAGGGATTGG 59.521 55.000 0.00 0.00 0.00 3.16
2318 2456 2.364972 AATAAGGCGGGAAGGGATTG 57.635 50.000 0.00 0.00 0.00 2.67
2319 2457 3.296854 GAAAATAAGGCGGGAAGGGATT 58.703 45.455 0.00 0.00 0.00 3.01
2320 2458 2.424379 GGAAAATAAGGCGGGAAGGGAT 60.424 50.000 0.00 0.00 0.00 3.85
2321 2459 1.064240 GGAAAATAAGGCGGGAAGGGA 60.064 52.381 0.00 0.00 0.00 4.20
2322 2460 1.399714 GGAAAATAAGGCGGGAAGGG 58.600 55.000 0.00 0.00 0.00 3.95
2323 2461 1.399714 GGGAAAATAAGGCGGGAAGG 58.600 55.000 0.00 0.00 0.00 3.46
2324 2462 1.021968 CGGGAAAATAAGGCGGGAAG 58.978 55.000 0.00 0.00 0.00 3.46
2325 2463 1.033202 GCGGGAAAATAAGGCGGGAA 61.033 55.000 0.00 0.00 0.00 3.97
2326 2464 1.452470 GCGGGAAAATAAGGCGGGA 60.452 57.895 0.00 0.00 0.00 5.14
2327 2465 2.486663 GGCGGGAAAATAAGGCGGG 61.487 63.158 0.00 0.00 0.00 6.13
2328 2466 1.106944 ATGGCGGGAAAATAAGGCGG 61.107 55.000 0.00 0.00 0.00 6.13
2329 2467 1.265905 GTATGGCGGGAAAATAAGGCG 59.734 52.381 0.00 0.00 0.00 5.52
2330 2468 1.611977 GGTATGGCGGGAAAATAAGGC 59.388 52.381 0.00 0.00 0.00 4.35
2331 2469 1.877443 CGGTATGGCGGGAAAATAAGG 59.123 52.381 0.00 0.00 0.00 2.69
2332 2470 1.265905 GCGGTATGGCGGGAAAATAAG 59.734 52.381 0.00 0.00 0.00 1.73
2333 2471 1.310904 GCGGTATGGCGGGAAAATAA 58.689 50.000 0.00 0.00 0.00 1.40
2334 2472 0.180642 TGCGGTATGGCGGGAAAATA 59.819 50.000 0.00 0.00 35.06 1.40
2335 2473 1.077357 TGCGGTATGGCGGGAAAAT 60.077 52.632 0.00 0.00 35.06 1.82
2336 2474 1.747367 CTGCGGTATGGCGGGAAAA 60.747 57.895 0.00 0.00 35.63 2.29
2337 2475 2.124901 CTGCGGTATGGCGGGAAA 60.125 61.111 0.00 0.00 35.63 3.13
2338 2476 1.615165 TAACTGCGGTATGGCGGGAA 61.615 55.000 0.00 0.00 43.68 3.97
2339 2477 1.615165 TTAACTGCGGTATGGCGGGA 61.615 55.000 0.00 0.00 43.68 5.14
2340 2478 0.534203 ATTAACTGCGGTATGGCGGG 60.534 55.000 0.00 0.00 43.68 6.13
2341 2479 0.865769 GATTAACTGCGGTATGGCGG 59.134 55.000 0.00 0.00 44.93 6.13
2342 2480 1.865865 AGATTAACTGCGGTATGGCG 58.134 50.000 0.00 0.00 35.06 5.69
2343 2481 3.003378 GGAAAGATTAACTGCGGTATGGC 59.997 47.826 0.00 0.00 0.00 4.40
2344 2482 3.564225 GGGAAAGATTAACTGCGGTATGG 59.436 47.826 0.00 0.00 0.00 2.74
2345 2483 3.247648 CGGGAAAGATTAACTGCGGTATG 59.752 47.826 0.00 0.00 0.00 2.39
2346 2484 3.463944 CGGGAAAGATTAACTGCGGTAT 58.536 45.455 0.00 0.00 0.00 2.73
2347 2485 2.896168 CGGGAAAGATTAACTGCGGTA 58.104 47.619 0.00 0.00 0.00 4.02
2348 2486 1.734163 CGGGAAAGATTAACTGCGGT 58.266 50.000 0.00 0.00 0.00 5.68
2349 2487 0.377203 GCGGGAAAGATTAACTGCGG 59.623 55.000 0.00 0.00 0.00 5.69
2350 2488 0.377203 GGCGGGAAAGATTAACTGCG 59.623 55.000 0.00 0.00 36.11 5.18
2351 2489 1.459450 TGGCGGGAAAGATTAACTGC 58.541 50.000 0.00 0.00 34.56 4.40
2352 2490 4.718940 AAATGGCGGGAAAGATTAACTG 57.281 40.909 0.00 0.00 0.00 3.16
2353 2491 5.016831 AGAAAATGGCGGGAAAGATTAACT 58.983 37.500 0.00 0.00 0.00 2.24
2354 2492 5.324784 AGAAAATGGCGGGAAAGATTAAC 57.675 39.130 0.00 0.00 0.00 2.01
2355 2493 4.401202 GGAGAAAATGGCGGGAAAGATTAA 59.599 41.667 0.00 0.00 0.00 1.40
2356 2494 3.951680 GGAGAAAATGGCGGGAAAGATTA 59.048 43.478 0.00 0.00 0.00 1.75
2357 2495 2.760650 GGAGAAAATGGCGGGAAAGATT 59.239 45.455 0.00 0.00 0.00 2.40
2358 2496 2.024941 AGGAGAAAATGGCGGGAAAGAT 60.025 45.455 0.00 0.00 0.00 2.40
2359 2497 1.354368 AGGAGAAAATGGCGGGAAAGA 59.646 47.619 0.00 0.00 0.00 2.52
2360 2498 1.745653 GAGGAGAAAATGGCGGGAAAG 59.254 52.381 0.00 0.00 0.00 2.62
2361 2499 1.354368 AGAGGAGAAAATGGCGGGAAA 59.646 47.619 0.00 0.00 0.00 3.13
2362 2500 0.991920 AGAGGAGAAAATGGCGGGAA 59.008 50.000 0.00 0.00 0.00 3.97
2363 2501 0.253044 CAGAGGAGAAAATGGCGGGA 59.747 55.000 0.00 0.00 0.00 5.14
2364 2502 0.035056 ACAGAGGAGAAAATGGCGGG 60.035 55.000 0.00 0.00 0.00 6.13
2365 2503 2.691409 TACAGAGGAGAAAATGGCGG 57.309 50.000 0.00 0.00 0.00 6.13
2366 2504 4.065321 AGATACAGAGGAGAAAATGGCG 57.935 45.455 0.00 0.00 0.00 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.