Multiple sequence alignment - TraesCS5A01G488100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G488100 chr5A 100.000 5538 0 0 1 5538 657978268 657983805 0.000000e+00 10227.0
1 TraesCS5A01G488100 chr5A 95.745 188 7 1 1 187 571840692 571840505 9.020000e-78 302.0
2 TraesCS5A01G488100 chr5A 95.745 188 7 1 1 187 571901089 571900902 9.020000e-78 302.0
3 TraesCS5A01G488100 chr5A 83.117 154 15 4 5307 5451 675480441 675480290 4.500000e-26 130.0
4 TraesCS5A01G488100 chr5B 90.864 3043 168 33 186 3201 669287465 669290424 0.000000e+00 3978.0
5 TraesCS5A01G488100 chr5B 94.216 1850 77 7 3197 5029 669290463 669292299 0.000000e+00 2796.0
6 TraesCS5A01G488100 chr5B 81.727 799 123 14 3358 4138 657170980 657170187 0.000000e+00 645.0
7 TraesCS5A01G488100 chr5D 94.888 1917 62 9 3197 5097 530063530 530065426 0.000000e+00 2964.0
8 TraesCS5A01G488100 chr5D 94.077 1587 59 19 1630 3201 530061925 530063491 0.000000e+00 2377.0
9 TraesCS5A01G488100 chr5D 87.258 1444 111 33 180 1582 530060516 530061927 0.000000e+00 1580.0
10 TraesCS5A01G488100 chr5D 93.103 203 8 6 1 201 513614974 513614776 5.430000e-75 292.0
11 TraesCS5A01G488100 chr1D 96.277 188 5 2 1 187 344168130 344168316 1.940000e-79 307.0
12 TraesCS5A01G488100 chr6D 96.721 183 5 1 1 182 413344784 413344966 2.510000e-78 303.0
13 TraesCS5A01G488100 chr6D 82.812 128 16 4 5340 5462 462634040 462634166 5.870000e-20 110.0
14 TraesCS5A01G488100 chr1A 96.721 183 5 1 1 182 419343535 419343717 2.510000e-78 303.0
15 TraesCS5A01G488100 chr3D 91.743 218 10 8 1 211 178394682 178394466 4.190000e-76 296.0
16 TraesCS5A01G488100 chr7D 92.718 206 9 5 1 203 146619487 146619689 5.430000e-75 292.0
17 TraesCS5A01G488100 chr7D 83.766 154 16 4 5307 5452 163200904 163201056 2.690000e-28 137.0
18 TraesCS5A01G488100 chr4A 92.574 202 11 4 1 201 313554922 313555120 2.520000e-73 287.0
19 TraesCS5A01G488100 chr4A 81.618 136 11 11 5315 5438 669779447 669779314 3.530000e-17 100.0
20 TraesCS5A01G488100 chr2A 84.211 152 17 4 5307 5451 565219940 565220091 2.080000e-29 141.0
21 TraesCS5A01G488100 chr2D 84.397 141 16 4 5310 5444 423374422 423374282 3.480000e-27 134.0
22 TraesCS5A01G488100 chr2D 81.507 146 14 8 5318 5452 11476478 11476335 2.110000e-19 108.0
23 TraesCS5A01G488100 chr2B 84.821 112 3 8 5328 5427 17501527 17501636 3.530000e-17 100.0
24 TraesCS5A01G488100 chr2B 78.912 147 20 8 5331 5468 571524175 571524031 7.640000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G488100 chr5A 657978268 657983805 5537 False 10227 10227 100.000000 1 5538 1 chr5A.!!$F1 5537
1 TraesCS5A01G488100 chr5B 669287465 669292299 4834 False 3387 3978 92.540000 186 5029 2 chr5B.!!$F1 4843
2 TraesCS5A01G488100 chr5B 657170187 657170980 793 True 645 645 81.727000 3358 4138 1 chr5B.!!$R1 780
3 TraesCS5A01G488100 chr5D 530060516 530065426 4910 False 2307 2964 92.074333 180 5097 3 chr5D.!!$F1 4917

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 391 0.031449 CGGGCACAAACGAACCAAAT 59.969 50.0 0.00 0.0 0.00 2.32 F
414 416 0.242017 CTGCCTAGCACAACTTTGGC 59.758 55.0 0.00 0.0 43.23 4.52 F
1596 1646 0.319555 ACGCGTTTGCTCTTGCTCTA 60.320 50.0 5.58 0.0 40.48 2.43 F
2364 2429 0.730265 TTTGACGCGTGAATATGGGC 59.270 50.0 20.70 0.0 0.00 5.36 F
3340 3463 0.250901 TTGCCAGGAAAGCAGGAGTC 60.251 55.0 0.00 0.0 42.17 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1724 1775 1.271856 TCTTGGACCATGGCGACTAA 58.728 50.000 13.04 7.19 0.0 2.24 R
2205 2270 2.940410 ACACGGCCTGGTAAATTTATCG 59.060 45.455 0.00 0.00 0.0 2.92 R
2644 2709 0.391661 CAACTGAGACATGTCCCCCG 60.392 60.000 22.21 12.84 0.0 5.73 R
3693 3816 0.387622 CAACTTGCTCACCCATTGCG 60.388 55.000 0.00 0.00 0.0 4.85 R
5103 5237 0.744414 TCACTAATCTGCAAGCCCGC 60.744 55.000 0.00 0.00 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.763172 ATCTTTGATTAACGAGCTAGTCAAG 57.237 36.000 0.00 0.00 31.56 3.02
25 26 6.688578 TCTTTGATTAACGAGCTAGTCAAGT 58.311 36.000 0.00 0.00 31.56 3.16
26 27 7.823665 TCTTTGATTAACGAGCTAGTCAAGTA 58.176 34.615 0.00 0.00 31.56 2.24
27 28 7.968956 TCTTTGATTAACGAGCTAGTCAAGTAG 59.031 37.037 0.00 0.00 31.56 2.57
28 29 6.997239 TGATTAACGAGCTAGTCAAGTAGA 57.003 37.500 0.00 0.00 0.00 2.59
29 30 7.017498 TGATTAACGAGCTAGTCAAGTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
30 31 5.814764 TTAACGAGCTAGTCAAGTAGAGG 57.185 43.478 0.00 0.00 0.00 3.69
31 32 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
32 33 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
33 34 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
34 35 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
35 36 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
36 37 4.798882 AGCTAGTCAAGTAGAGGCATACT 58.201 43.478 0.00 0.00 37.61 2.12
37 38 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
38 39 6.001460 AGCTAGTCAAGTAGAGGCATACTAG 58.999 44.000 0.00 0.00 38.50 2.57
39 40 5.766174 GCTAGTCAAGTAGAGGCATACTAGT 59.234 44.000 0.00 0.00 38.02 2.57
40 41 6.293735 GCTAGTCAAGTAGAGGCATACTAGTG 60.294 46.154 5.39 0.00 38.02 2.74
41 42 5.756918 AGTCAAGTAGAGGCATACTAGTGA 58.243 41.667 5.39 2.59 34.90 3.41
42 43 5.591067 AGTCAAGTAGAGGCATACTAGTGAC 59.409 44.000 17.97 17.97 40.57 3.67
43 44 5.357314 GTCAAGTAGAGGCATACTAGTGACA 59.643 44.000 19.41 0.00 40.28 3.58
44 45 5.357314 TCAAGTAGAGGCATACTAGTGACAC 59.643 44.000 5.39 0.00 34.90 3.67
45 46 5.118729 AGTAGAGGCATACTAGTGACACT 57.881 43.478 13.68 13.68 34.21 3.55
46 47 5.127491 AGTAGAGGCATACTAGTGACACTC 58.873 45.833 12.39 8.31 34.21 3.51
47 48 4.243793 AGAGGCATACTAGTGACACTCT 57.756 45.455 12.39 10.40 0.00 3.24
48 49 3.951037 AGAGGCATACTAGTGACACTCTG 59.049 47.826 12.39 9.04 33.23 3.35
49 50 3.697045 GAGGCATACTAGTGACACTCTGT 59.303 47.826 12.39 14.35 0.00 3.41
50 51 4.090090 AGGCATACTAGTGACACTCTGTT 58.910 43.478 12.39 0.00 0.00 3.16
51 52 4.528596 AGGCATACTAGTGACACTCTGTTT 59.471 41.667 12.39 5.23 0.00 2.83
52 53 4.627467 GGCATACTAGTGACACTCTGTTTG 59.373 45.833 12.39 16.63 0.00 2.93
53 54 5.230942 GCATACTAGTGACACTCTGTTTGT 58.769 41.667 12.39 5.61 0.00 2.83
54 55 5.346281 GCATACTAGTGACACTCTGTTTGTC 59.654 44.000 12.39 9.81 43.22 3.18
55 56 6.682746 CATACTAGTGACACTCTGTTTGTCT 58.317 40.000 12.39 0.00 43.30 3.41
56 57 7.575155 GCATACTAGTGACACTCTGTTTGTCTA 60.575 40.741 12.39 0.00 43.30 2.59
57 58 6.902771 ACTAGTGACACTCTGTTTGTCTAT 57.097 37.500 12.39 0.00 43.30 1.98
58 59 6.682746 ACTAGTGACACTCTGTTTGTCTATG 58.317 40.000 12.39 0.00 43.30 2.23
59 60 5.537300 AGTGACACTCTGTTTGTCTATGT 57.463 39.130 1.07 0.00 43.30 2.29
60 61 6.650427 AGTGACACTCTGTTTGTCTATGTA 57.350 37.500 1.07 0.00 43.30 2.29
61 62 7.233389 AGTGACACTCTGTTTGTCTATGTAT 57.767 36.000 1.07 0.00 43.30 2.29
62 63 7.671302 AGTGACACTCTGTTTGTCTATGTATT 58.329 34.615 1.07 0.00 43.30 1.89
63 64 7.815068 AGTGACACTCTGTTTGTCTATGTATTC 59.185 37.037 1.07 0.00 43.30 1.75
64 65 7.598869 GTGACACTCTGTTTGTCTATGTATTCA 59.401 37.037 0.00 0.00 43.30 2.57
65 66 7.598869 TGACACTCTGTTTGTCTATGTATTCAC 59.401 37.037 11.01 0.00 43.30 3.18
66 67 7.441836 ACACTCTGTTTGTCTATGTATTCACA 58.558 34.615 0.00 0.00 39.52 3.58
67 68 7.385205 ACACTCTGTTTGTCTATGTATTCACAC 59.615 37.037 0.00 0.00 37.54 3.82
68 69 7.384932 CACTCTGTTTGTCTATGTATTCACACA 59.615 37.037 0.00 0.00 37.54 3.72
69 70 8.097038 ACTCTGTTTGTCTATGTATTCACACAT 58.903 33.333 0.00 0.00 41.88 3.21
70 71 8.255394 TCTGTTTGTCTATGTATTCACACATG 57.745 34.615 0.00 0.00 39.46 3.21
71 72 7.877612 TCTGTTTGTCTATGTATTCACACATGT 59.122 33.333 0.00 0.00 39.46 3.21
72 73 9.150348 CTGTTTGTCTATGTATTCACACATGTA 57.850 33.333 0.00 0.00 39.46 2.29
73 74 8.931775 TGTTTGTCTATGTATTCACACATGTAC 58.068 33.333 0.00 0.00 39.46 2.90
74 75 9.151471 GTTTGTCTATGTATTCACACATGTACT 57.849 33.333 0.00 0.00 39.46 2.73
83 84 8.705134 TGTATTCACACATGTACTAAGTTTTCG 58.295 33.333 0.00 0.00 0.00 3.46
84 85 6.533819 TTCACACATGTACTAAGTTTTCGG 57.466 37.500 0.00 0.00 0.00 4.30
85 86 5.603596 TCACACATGTACTAAGTTTTCGGT 58.396 37.500 0.00 0.00 0.00 4.69
86 87 6.747125 TCACACATGTACTAAGTTTTCGGTA 58.253 36.000 0.00 0.00 0.00 4.02
87 88 7.208777 TCACACATGTACTAAGTTTTCGGTAA 58.791 34.615 0.00 0.00 0.00 2.85
88 89 7.710044 TCACACATGTACTAAGTTTTCGGTAAA 59.290 33.333 0.00 0.00 0.00 2.01
89 90 8.500773 CACACATGTACTAAGTTTTCGGTAAAT 58.499 33.333 0.00 0.00 0.00 1.40
90 91 9.709495 ACACATGTACTAAGTTTTCGGTAAATA 57.291 29.630 0.00 0.00 0.00 1.40
91 92 9.962759 CACATGTACTAAGTTTTCGGTAAATAC 57.037 33.333 0.00 0.00 0.00 1.89
92 93 9.709495 ACATGTACTAAGTTTTCGGTAAATACA 57.291 29.630 0.00 0.00 0.00 2.29
101 102 8.851541 AGTTTTCGGTAAATACAATTCTACCA 57.148 30.769 0.00 0.00 34.62 3.25
102 103 9.457436 AGTTTTCGGTAAATACAATTCTACCAT 57.543 29.630 0.00 0.00 34.62 3.55
103 104 9.498307 GTTTTCGGTAAATACAATTCTACCATG 57.502 33.333 0.00 0.00 34.62 3.66
104 105 9.451002 TTTTCGGTAAATACAATTCTACCATGA 57.549 29.630 0.00 0.00 34.62 3.07
105 106 9.621629 TTTCGGTAAATACAATTCTACCATGAT 57.378 29.630 0.00 0.00 34.62 2.45
237 239 6.098017 GGGATATAATAAACTCGGACGAAGG 58.902 44.000 0.00 0.00 0.00 3.46
244 246 1.915141 ACTCGGACGAAGGGAGTAAA 58.085 50.000 0.00 0.00 39.14 2.01
245 247 1.817447 ACTCGGACGAAGGGAGTAAAG 59.183 52.381 0.00 0.00 39.14 1.85
260 262 5.182001 GGGAGTAAAGAGTAGTAACACACGA 59.818 44.000 0.00 0.00 0.00 4.35
318 320 4.722700 AATGGCGAGGCAAGGCGT 62.723 61.111 2.86 0.00 36.92 5.68
345 347 1.080839 CGACACAAATTTGGGCCGG 60.081 57.895 19.93 6.43 34.06 6.13
375 377 2.052779 CTATCTGATCTGGCGGGCA 58.947 57.895 3.57 3.57 0.00 5.36
377 379 1.048160 TATCTGATCTGGCGGGCACA 61.048 55.000 0.00 0.00 0.00 4.57
389 391 0.031449 CGGGCACAAACGAACCAAAT 59.969 50.000 0.00 0.00 0.00 2.32
408 410 1.508632 TTTCGACTGCCTAGCACAAC 58.491 50.000 0.00 0.00 33.79 3.32
414 416 0.242017 CTGCCTAGCACAACTTTGGC 59.758 55.000 0.00 0.00 43.23 4.52
457 459 1.340991 GCTGGCCACAATAGGGAGAAA 60.341 52.381 0.00 0.00 0.00 2.52
465 467 4.506625 CCACAATAGGGAGAAAGTTGGACA 60.507 45.833 0.00 0.00 0.00 4.02
468 470 0.396811 AGGGAGAAAGTTGGACACGG 59.603 55.000 0.00 0.00 0.00 4.94
505 507 1.323271 GCTCTCCCGTGTGAGATGGA 61.323 60.000 0.95 0.00 40.47 3.41
531 533 4.898002 GCACTGTGCGAGAGATGA 57.102 55.556 17.93 0.00 31.71 2.92
534 536 1.800586 GCACTGTGCGAGAGATGAAAA 59.199 47.619 17.93 0.00 31.71 2.29
538 540 1.798223 TGTGCGAGAGATGAAAAACGG 59.202 47.619 0.00 0.00 0.00 4.44
586 588 2.661537 CCGCAAGAGCACGTGTCA 60.662 61.111 18.38 0.00 42.27 3.58
587 589 2.546321 CGCAAGAGCACGTGTCAC 59.454 61.111 18.38 8.25 42.27 3.67
607 609 6.553100 TGTCACCTTTGGATTGGTTTATTTCT 59.447 34.615 0.00 0.00 33.75 2.52
726 735 7.683437 AACAGTGATTAAAGGCTACTTTACC 57.317 36.000 0.00 0.00 46.01 2.85
816 848 7.313951 AGCATGCATTCTAAACTCTAAAGTC 57.686 36.000 21.98 0.00 33.48 3.01
862 896 0.860457 AAAGAGAGGGGGTTGCCTTT 59.140 50.000 0.00 0.00 0.00 3.11
878 912 1.515521 CTTTCTCACGTGCCCCAACC 61.516 60.000 11.67 0.00 0.00 3.77
1439 1478 4.912485 TTTGGTTCGCGGCGTCCA 62.912 61.111 27.07 27.07 32.94 4.02
1509 1548 2.588877 CGCCGATGATTCCGCCTT 60.589 61.111 0.00 0.00 0.00 4.35
1539 1589 2.030213 GTGATCTTTGATCTGTCGCTGC 59.970 50.000 8.71 0.00 0.00 5.25
1594 1644 1.439365 CACGCGTTTGCTCTTGCTC 60.439 57.895 10.22 0.00 40.48 4.26
1595 1645 1.595382 ACGCGTTTGCTCTTGCTCT 60.595 52.632 5.58 0.00 40.48 4.09
1596 1646 0.319555 ACGCGTTTGCTCTTGCTCTA 60.320 50.000 5.58 0.00 40.48 2.43
1598 1648 1.394917 CGCGTTTGCTCTTGCTCTAAT 59.605 47.619 0.00 0.00 40.48 1.73
1602 1652 1.656652 TTGCTCTTGCTCTAATCGCC 58.343 50.000 0.00 0.00 40.48 5.54
1642 1693 1.427819 CCTGTGCGAATTTACGGCC 59.572 57.895 0.00 0.00 0.00 6.13
1768 1819 1.207329 GGTAGGAATTGGCGTGTCTCT 59.793 52.381 0.00 0.00 0.00 3.10
1789 1840 8.031277 GTCTCTTTCATTCATTTATTGCCAGTT 58.969 33.333 0.00 0.00 0.00 3.16
1845 1896 1.906574 ACTTAGGGGCGAAGTTCATGA 59.093 47.619 3.32 0.00 33.25 3.07
1972 2026 7.093509 TGGTAACTAGTGTGCTTTGATGAGATA 60.094 37.037 0.00 0.00 37.61 1.98
2170 2235 0.748367 TACAAACCTGTGCGTTGCCA 60.748 50.000 0.00 0.00 36.96 4.92
2205 2270 1.327764 GGATCGATGTTTGGTTCGCTC 59.672 52.381 0.54 0.00 35.39 5.03
2222 2287 2.223377 CGCTCGATAAATTTACCAGGCC 59.777 50.000 0.00 0.00 0.00 5.19
2313 2378 9.793252 GTCATCATATTCTTATGCTGTGTTTTT 57.207 29.630 0.00 0.00 34.82 1.94
2364 2429 0.730265 TTTGACGCGTGAATATGGGC 59.270 50.000 20.70 0.00 0.00 5.36
2382 2447 5.298989 TGGGCGACTGTATATTATTTGGT 57.701 39.130 0.00 0.00 0.00 3.67
2470 2535 1.065418 AGTGGAATCCGTTGGGTCATC 60.065 52.381 0.00 0.00 33.83 2.92
2548 2613 2.879002 TTTGGATCTAGCTGCTCTCG 57.121 50.000 4.91 0.00 0.00 4.04
2606 2671 7.398829 TGTGGCCTGTTATCTTTTAACTATCA 58.601 34.615 3.32 0.00 0.00 2.15
2640 2705 3.793797 AAACGGTGCTAAGCAACTTTT 57.206 38.095 0.00 0.00 45.07 2.27
2644 2709 2.095415 CGGTGCTAAGCAACTTTTACCC 60.095 50.000 0.00 0.00 45.07 3.69
2718 2783 9.426837 ACACCAACTCATTTTGATCAAAATATG 57.573 29.630 34.62 30.05 46.01 1.78
2774 2839 6.304356 TCAAATGTTCTGTTCACATCAGAC 57.696 37.500 0.00 0.00 40.90 3.51
2821 2886 2.749621 GGTAGTTCAGATTTGGCAGGTG 59.250 50.000 0.00 0.00 0.00 4.00
2926 2991 9.135189 TGCTGCATTTAAGGATTAATAAGTCAT 57.865 29.630 0.00 0.00 40.76 3.06
2976 3041 8.989131 AGTCCTAAGAGCTTATTTATGGTTGTA 58.011 33.333 0.00 0.00 0.00 2.41
3033 3098 4.966805 TCGTCCTAGGGTTATCCAAGATTT 59.033 41.667 9.46 0.00 38.24 2.17
3084 3149 2.168313 TGTCTTTATGCCGAGAGATGCA 59.832 45.455 0.00 0.00 42.52 3.96
3139 3204 0.610174 TCCTGCTGACTTGGCACTAG 59.390 55.000 0.00 0.00 35.71 2.57
3159 3224 6.099269 CACTAGGCCACCCTTCTAATAAGTTA 59.901 42.308 5.01 0.00 42.87 2.24
3333 3456 0.529378 CTCCATGTTGCCAGGAAAGC 59.471 55.000 0.00 0.00 0.00 3.51
3340 3463 0.250901 TTGCCAGGAAAGCAGGAGTC 60.251 55.000 0.00 0.00 42.17 3.36
3349 3472 3.844090 GCAGGAGTCCGGAGAGGC 61.844 72.222 14.12 0.29 40.77 4.70
3619 3742 2.952978 GGATCTGAGGACTGTGTACGAT 59.047 50.000 0.00 0.00 0.00 3.73
3693 3816 4.793028 GCTTTCAAAAACTGTGGGCTAGAC 60.793 45.833 0.00 0.00 0.00 2.59
3873 3996 7.519032 TTACTACAATGTTTTTCTTCCCAGG 57.481 36.000 0.00 0.00 0.00 4.45
3921 4044 5.356470 AGAGCATAAAAAGGATGAAGCTGTC 59.644 40.000 0.00 0.00 0.00 3.51
4088 4215 7.544804 ACATATGCCTGTCATTACTATCTCA 57.455 36.000 1.58 0.00 36.63 3.27
4142 4269 3.141767 AGTAAGAAGTCAAAGGGGTGC 57.858 47.619 0.00 0.00 0.00 5.01
4199 4331 4.339748 TGCTTGTCACTACTCTCTCAGAT 58.660 43.478 0.00 0.00 0.00 2.90
4200 4332 4.157472 TGCTTGTCACTACTCTCTCAGATG 59.843 45.833 0.00 0.00 0.00 2.90
4201 4333 4.157656 GCTTGTCACTACTCTCTCAGATGT 59.842 45.833 0.00 0.00 0.00 3.06
4202 4334 5.336372 GCTTGTCACTACTCTCTCAGATGTT 60.336 44.000 0.00 0.00 0.00 2.71
4203 4335 6.127869 GCTTGTCACTACTCTCTCAGATGTTA 60.128 42.308 0.00 0.00 0.00 2.41
4204 4336 6.745159 TGTCACTACTCTCTCAGATGTTAC 57.255 41.667 0.00 0.00 0.00 2.50
4205 4337 6.238648 TGTCACTACTCTCTCAGATGTTACA 58.761 40.000 0.00 0.00 0.00 2.41
4343 4477 7.315247 TGTCAGCATGTACACATTAATTACC 57.685 36.000 0.00 0.00 37.40 2.85
4415 4549 6.146347 GCACTAGTCTACTTTGAAAGTCAAGG 59.854 42.308 14.64 4.20 41.77 3.61
4438 4572 7.678947 GGAATAATCCATGTCCACTCTATTG 57.321 40.000 0.00 0.00 45.79 1.90
4634 4768 7.141363 CAGTGGAAGAGGAATTAACAGTTTTG 58.859 38.462 0.00 0.00 0.00 2.44
4635 4769 6.833933 AGTGGAAGAGGAATTAACAGTTTTGT 59.166 34.615 0.00 0.00 39.87 2.83
4638 4772 7.123547 TGGAAGAGGAATTAACAGTTTTGTTGT 59.876 33.333 3.33 0.00 46.63 3.32
4679 4813 3.202829 ACTTGAGAAAGCGGGTTTACA 57.797 42.857 4.99 6.55 0.00 2.41
4700 4834 4.940046 ACATGATAAGAGTTTGCAGTGGAG 59.060 41.667 0.00 0.00 0.00 3.86
4757 4891 2.615447 CTCCAGCGGTCGTATAAGTACA 59.385 50.000 0.00 0.00 0.00 2.90
4769 4903 8.628280 GGTCGTATAAGTACAAGATTCTTACCT 58.372 37.037 0.00 0.00 0.00 3.08
4783 4917 5.391312 TTCTTACCTTAGTTACCGGTGAC 57.609 43.478 21.25 21.25 32.36 3.67
4808 4942 1.153549 CCTAAGCAGGTCTCACCGC 60.154 63.158 0.00 2.49 44.90 5.68
4824 4958 1.206578 CGCCACCACGACATTTGAC 59.793 57.895 0.00 0.00 34.06 3.18
4886 5020 0.531657 TTGCTGTAATGTGCATGGCC 59.468 50.000 0.00 0.00 39.07 5.36
4891 5025 1.973515 TGTAATGTGCATGGCCCAAAA 59.026 42.857 0.00 0.00 0.00 2.44
4901 5035 0.251341 TGGCCCAAAAGAGAGAAGGC 60.251 55.000 0.00 0.00 39.73 4.35
4924 5058 3.861846 AGTGATATATGGAGAGTGGGCA 58.138 45.455 0.00 0.00 0.00 5.36
4925 5059 4.433255 AGTGATATATGGAGAGTGGGCAT 58.567 43.478 0.00 0.00 0.00 4.40
4966 5100 8.776376 AAATGCATTTAGGTATTCTTTTGGTG 57.224 30.769 22.95 0.00 0.00 4.17
4968 5102 8.588290 ATGCATTTAGGTATTCTTTTGGTGTA 57.412 30.769 0.00 0.00 0.00 2.90
4973 5107 9.628500 ATTTAGGTATTCTTTTGGTGTATCCTC 57.372 33.333 0.00 0.00 37.07 3.71
4994 5128 7.394016 TCCTCAAACTTAAATCTGCAGATGTA 58.606 34.615 29.34 24.82 34.49 2.29
4995 5129 7.882791 TCCTCAAACTTAAATCTGCAGATGTAA 59.117 33.333 29.35 29.35 34.17 2.41
5040 5174 2.231235 ACAGATTTTTGGGGAATGTCGC 59.769 45.455 0.00 0.00 0.00 5.19
5097 5231 4.141620 GGTTCTCATCTAGGGCATTCTTCA 60.142 45.833 0.00 0.00 0.00 3.02
5098 5232 4.952071 TCTCATCTAGGGCATTCTTCAG 57.048 45.455 0.00 0.00 0.00 3.02
5099 5233 4.293494 TCTCATCTAGGGCATTCTTCAGT 58.707 43.478 0.00 0.00 0.00 3.41
5100 5234 5.458595 TCTCATCTAGGGCATTCTTCAGTA 58.541 41.667 0.00 0.00 0.00 2.74
5101 5235 5.303078 TCTCATCTAGGGCATTCTTCAGTAC 59.697 44.000 0.00 0.00 0.00 2.73
5102 5236 5.211973 TCATCTAGGGCATTCTTCAGTACT 58.788 41.667 0.00 0.00 0.00 2.73
5103 5237 5.069648 TCATCTAGGGCATTCTTCAGTACTG 59.930 44.000 17.17 17.17 0.00 2.74
5104 5238 2.409948 AGGGCATTCTTCAGTACTGC 57.590 50.000 18.45 5.21 0.00 4.40
5105 5239 1.009829 GGGCATTCTTCAGTACTGCG 58.990 55.000 18.45 11.34 33.69 5.18
5106 5240 1.009829 GGCATTCTTCAGTACTGCGG 58.990 55.000 18.45 12.47 33.69 5.69
5107 5241 1.009829 GCATTCTTCAGTACTGCGGG 58.990 55.000 18.45 10.09 0.00 6.13
5108 5242 1.009829 CATTCTTCAGTACTGCGGGC 58.990 55.000 18.45 0.00 0.00 6.13
5109 5243 0.905357 ATTCTTCAGTACTGCGGGCT 59.095 50.000 18.45 0.00 0.00 5.19
5110 5244 0.685097 TTCTTCAGTACTGCGGGCTT 59.315 50.000 18.45 0.00 0.00 4.35
5111 5245 0.037326 TCTTCAGTACTGCGGGCTTG 60.037 55.000 18.45 3.19 0.00 4.01
5112 5246 1.639298 CTTCAGTACTGCGGGCTTGC 61.639 60.000 18.45 0.00 0.00 4.01
5113 5247 2.358615 CAGTACTGCGGGCTTGCA 60.359 61.111 10.54 4.97 43.95 4.08
5119 5253 4.223800 TGCGGGCTTGCAGATTAG 57.776 55.556 0.87 0.00 40.62 1.73
5120 5254 1.299648 TGCGGGCTTGCAGATTAGT 59.700 52.632 0.87 0.00 40.62 2.24
5121 5255 1.026182 TGCGGGCTTGCAGATTAGTG 61.026 55.000 0.87 0.00 40.62 2.74
5122 5256 0.744414 GCGGGCTTGCAGATTAGTGA 60.744 55.000 0.00 0.00 34.15 3.41
5123 5257 1.959042 CGGGCTTGCAGATTAGTGAT 58.041 50.000 0.00 0.00 0.00 3.06
5124 5258 2.806745 GCGGGCTTGCAGATTAGTGATA 60.807 50.000 0.00 0.00 34.15 2.15
5125 5259 3.062763 CGGGCTTGCAGATTAGTGATAG 58.937 50.000 0.00 0.00 0.00 2.08
5126 5260 3.243873 CGGGCTTGCAGATTAGTGATAGA 60.244 47.826 0.00 0.00 0.00 1.98
5127 5261 4.314121 GGGCTTGCAGATTAGTGATAGAG 58.686 47.826 0.00 0.00 0.00 2.43
5128 5262 4.314121 GGCTTGCAGATTAGTGATAGAGG 58.686 47.826 0.00 0.00 0.00 3.69
5129 5263 4.202305 GGCTTGCAGATTAGTGATAGAGGT 60.202 45.833 0.00 0.00 0.00 3.85
5130 5264 4.749099 GCTTGCAGATTAGTGATAGAGGTG 59.251 45.833 0.00 0.00 0.00 4.00
5131 5265 5.683509 GCTTGCAGATTAGTGATAGAGGTGT 60.684 44.000 0.00 0.00 0.00 4.16
5132 5266 5.268118 TGCAGATTAGTGATAGAGGTGTG 57.732 43.478 0.00 0.00 0.00 3.82
5133 5267 4.711846 TGCAGATTAGTGATAGAGGTGTGT 59.288 41.667 0.00 0.00 0.00 3.72
5134 5268 5.187772 TGCAGATTAGTGATAGAGGTGTGTT 59.812 40.000 0.00 0.00 0.00 3.32
5135 5269 6.109359 GCAGATTAGTGATAGAGGTGTGTTT 58.891 40.000 0.00 0.00 0.00 2.83
5136 5270 7.093509 TGCAGATTAGTGATAGAGGTGTGTTTA 60.094 37.037 0.00 0.00 0.00 2.01
5137 5271 7.928706 GCAGATTAGTGATAGAGGTGTGTTTAT 59.071 37.037 0.00 0.00 0.00 1.40
5138 5272 9.823647 CAGATTAGTGATAGAGGTGTGTTTATT 57.176 33.333 0.00 0.00 0.00 1.40
5141 5275 9.614792 ATTAGTGATAGAGGTGTGTTTATTTCC 57.385 33.333 0.00 0.00 0.00 3.13
5142 5276 7.259088 AGTGATAGAGGTGTGTTTATTTCCT 57.741 36.000 0.00 0.00 0.00 3.36
5143 5277 7.331791 AGTGATAGAGGTGTGTTTATTTCCTC 58.668 38.462 0.00 0.00 43.29 3.71
5148 5282 4.911390 AGGTGTGTTTATTTCCTCTCTGG 58.089 43.478 0.00 0.00 37.10 3.86
5149 5283 4.351111 AGGTGTGTTTATTTCCTCTCTGGT 59.649 41.667 0.00 0.00 37.07 4.00
5150 5284 4.455877 GGTGTGTTTATTTCCTCTCTGGTG 59.544 45.833 0.00 0.00 37.07 4.17
5151 5285 5.305585 GTGTGTTTATTTCCTCTCTGGTGA 58.694 41.667 0.00 0.00 37.07 4.02
5152 5286 5.940470 GTGTGTTTATTTCCTCTCTGGTGAT 59.060 40.000 0.00 0.00 37.07 3.06
5153 5287 6.431234 GTGTGTTTATTTCCTCTCTGGTGATT 59.569 38.462 0.00 0.00 37.07 2.57
5154 5288 6.430925 TGTGTTTATTTCCTCTCTGGTGATTG 59.569 38.462 0.00 0.00 37.07 2.67
5155 5289 6.655003 GTGTTTATTTCCTCTCTGGTGATTGA 59.345 38.462 0.00 0.00 37.07 2.57
5156 5290 7.337942 GTGTTTATTTCCTCTCTGGTGATTGAT 59.662 37.037 0.00 0.00 37.07 2.57
5157 5291 7.337689 TGTTTATTTCCTCTCTGGTGATTGATG 59.662 37.037 0.00 0.00 37.07 3.07
5158 5292 5.705397 ATTTCCTCTCTGGTGATTGATGA 57.295 39.130 0.00 0.00 37.07 2.92
5159 5293 5.503634 TTTCCTCTCTGGTGATTGATGAA 57.496 39.130 0.00 0.00 37.07 2.57
5160 5294 4.478206 TCCTCTCTGGTGATTGATGAAC 57.522 45.455 0.00 0.00 37.07 3.18
5161 5295 3.840078 TCCTCTCTGGTGATTGATGAACA 59.160 43.478 0.00 0.00 37.07 3.18
5162 5296 4.081254 TCCTCTCTGGTGATTGATGAACAG 60.081 45.833 0.00 0.00 37.07 3.16
5163 5297 4.081254 CCTCTCTGGTGATTGATGAACAGA 60.081 45.833 0.00 0.00 34.23 3.41
5164 5298 5.485620 CTCTCTGGTGATTGATGAACAGAA 58.514 41.667 0.10 0.00 34.90 3.02
5165 5299 5.868454 TCTCTGGTGATTGATGAACAGAAA 58.132 37.500 0.10 0.00 34.90 2.52
5166 5300 5.702670 TCTCTGGTGATTGATGAACAGAAAC 59.297 40.000 0.10 0.00 34.90 2.78
5167 5301 5.375773 TCTGGTGATTGATGAACAGAAACA 58.624 37.500 0.00 0.00 32.60 2.83
5168 5302 5.471116 TCTGGTGATTGATGAACAGAAACAG 59.529 40.000 0.00 0.00 32.60 3.16
5169 5303 5.132502 TGGTGATTGATGAACAGAAACAGT 58.867 37.500 0.00 0.00 0.00 3.55
5170 5304 5.239306 TGGTGATTGATGAACAGAAACAGTC 59.761 40.000 0.00 0.00 0.00 3.51
5171 5305 5.239306 GGTGATTGATGAACAGAAACAGTCA 59.761 40.000 0.00 0.00 0.00 3.41
5172 5306 6.369005 GTGATTGATGAACAGAAACAGTCAG 58.631 40.000 0.00 0.00 30.50 3.51
5173 5307 6.203530 GTGATTGATGAACAGAAACAGTCAGA 59.796 38.462 0.00 0.00 30.50 3.27
5174 5308 6.938596 TGATTGATGAACAGAAACAGTCAGAT 59.061 34.615 0.00 0.00 0.00 2.90
5175 5309 8.096414 TGATTGATGAACAGAAACAGTCAGATA 58.904 33.333 0.00 0.00 0.00 1.98
5176 5310 8.853077 ATTGATGAACAGAAACAGTCAGATAA 57.147 30.769 0.00 0.00 0.00 1.75
5177 5311 7.658179 TGATGAACAGAAACAGTCAGATAAC 57.342 36.000 0.00 0.00 0.00 1.89
5178 5312 7.445121 TGATGAACAGAAACAGTCAGATAACT 58.555 34.615 0.00 0.00 0.00 2.24
5179 5313 8.585018 TGATGAACAGAAACAGTCAGATAACTA 58.415 33.333 0.00 0.00 0.00 2.24
5180 5314 8.994429 ATGAACAGAAACAGTCAGATAACTAG 57.006 34.615 0.00 0.00 0.00 2.57
5181 5315 6.868864 TGAACAGAAACAGTCAGATAACTAGC 59.131 38.462 0.00 0.00 0.00 3.42
5182 5316 6.346477 ACAGAAACAGTCAGATAACTAGCA 57.654 37.500 0.00 0.00 0.00 3.49
5183 5317 6.393990 ACAGAAACAGTCAGATAACTAGCAG 58.606 40.000 0.00 0.00 0.00 4.24
5184 5318 5.290643 CAGAAACAGTCAGATAACTAGCAGC 59.709 44.000 0.00 0.00 0.00 5.25
5185 5319 3.810310 ACAGTCAGATAACTAGCAGCC 57.190 47.619 0.00 0.00 0.00 4.85
5186 5320 3.370104 ACAGTCAGATAACTAGCAGCCT 58.630 45.455 0.00 0.00 0.00 4.58
5187 5321 4.537751 ACAGTCAGATAACTAGCAGCCTA 58.462 43.478 0.00 0.00 0.00 3.93
5188 5322 4.956700 ACAGTCAGATAACTAGCAGCCTAA 59.043 41.667 0.00 0.00 0.00 2.69
5189 5323 5.422331 ACAGTCAGATAACTAGCAGCCTAAA 59.578 40.000 0.00 0.00 0.00 1.85
5190 5324 5.751028 CAGTCAGATAACTAGCAGCCTAAAC 59.249 44.000 0.00 0.00 0.00 2.01
5191 5325 5.422331 AGTCAGATAACTAGCAGCCTAAACA 59.578 40.000 0.00 0.00 0.00 2.83
5192 5326 6.070767 AGTCAGATAACTAGCAGCCTAAACAA 60.071 38.462 0.00 0.00 0.00 2.83
5193 5327 6.763610 GTCAGATAACTAGCAGCCTAAACAAT 59.236 38.462 0.00 0.00 0.00 2.71
5194 5328 7.281100 GTCAGATAACTAGCAGCCTAAACAATT 59.719 37.037 0.00 0.00 0.00 2.32
5195 5329 7.829211 TCAGATAACTAGCAGCCTAAACAATTT 59.171 33.333 0.00 0.00 0.00 1.82
5196 5330 8.462016 CAGATAACTAGCAGCCTAAACAATTTT 58.538 33.333 0.00 0.00 0.00 1.82
5197 5331 9.025041 AGATAACTAGCAGCCTAAACAATTTTT 57.975 29.630 0.00 0.00 0.00 1.94
5218 5352 7.915293 TTTTTCCTTGTTCCTTTTCTTTTCC 57.085 32.000 0.00 0.00 0.00 3.13
5219 5353 6.867519 TTTCCTTGTTCCTTTTCTTTTCCT 57.132 33.333 0.00 0.00 0.00 3.36
5220 5354 6.867519 TTCCTTGTTCCTTTTCTTTTCCTT 57.132 33.333 0.00 0.00 0.00 3.36
5221 5355 6.220726 TCCTTGTTCCTTTTCTTTTCCTTG 57.779 37.500 0.00 0.00 0.00 3.61
5222 5356 5.128663 TCCTTGTTCCTTTTCTTTTCCTTGG 59.871 40.000 0.00 0.00 0.00 3.61
5223 5357 5.104941 CCTTGTTCCTTTTCTTTTCCTTGGT 60.105 40.000 0.00 0.00 0.00 3.67
5224 5358 6.367374 TTGTTCCTTTTCTTTTCCTTGGTT 57.633 33.333 0.00 0.00 0.00 3.67
5225 5359 6.367374 TGTTCCTTTTCTTTTCCTTGGTTT 57.633 33.333 0.00 0.00 0.00 3.27
5226 5360 6.774673 TGTTCCTTTTCTTTTCCTTGGTTTT 58.225 32.000 0.00 0.00 0.00 2.43
5227 5361 7.908453 TGTTCCTTTTCTTTTCCTTGGTTTTA 58.092 30.769 0.00 0.00 0.00 1.52
5228 5362 8.544622 TGTTCCTTTTCTTTTCCTTGGTTTTAT 58.455 29.630 0.00 0.00 0.00 1.40
5229 5363 9.391006 GTTCCTTTTCTTTTCCTTGGTTTTATT 57.609 29.630 0.00 0.00 0.00 1.40
5230 5364 9.967451 TTCCTTTTCTTTTCCTTGGTTTTATTT 57.033 25.926 0.00 0.00 0.00 1.40
5231 5365 9.967451 TCCTTTTCTTTTCCTTGGTTTTATTTT 57.033 25.926 0.00 0.00 0.00 1.82
5235 5369 8.426881 TTCTTTTCCTTGGTTTTATTTTTCCG 57.573 30.769 0.00 0.00 0.00 4.30
5236 5370 6.480651 TCTTTTCCTTGGTTTTATTTTTCCGC 59.519 34.615 0.00 0.00 0.00 5.54
5237 5371 5.538849 TTCCTTGGTTTTATTTTTCCGCT 57.461 34.783 0.00 0.00 0.00 5.52
5238 5372 5.128992 TCCTTGGTTTTATTTTTCCGCTC 57.871 39.130 0.00 0.00 0.00 5.03
5239 5373 4.830600 TCCTTGGTTTTATTTTTCCGCTCT 59.169 37.500 0.00 0.00 0.00 4.09
5240 5374 5.303333 TCCTTGGTTTTATTTTTCCGCTCTT 59.697 36.000 0.00 0.00 0.00 2.85
5241 5375 5.989168 CCTTGGTTTTATTTTTCCGCTCTTT 59.011 36.000 0.00 0.00 0.00 2.52
5242 5376 6.481976 CCTTGGTTTTATTTTTCCGCTCTTTT 59.518 34.615 0.00 0.00 0.00 2.27
5243 5377 7.011950 CCTTGGTTTTATTTTTCCGCTCTTTTT 59.988 33.333 0.00 0.00 0.00 1.94
5262 5396 4.591998 TTTTTCCGCTTGTTTTGCTTTC 57.408 36.364 0.00 0.00 0.00 2.62
5263 5397 2.949451 TTCCGCTTGTTTTGCTTTCA 57.051 40.000 0.00 0.00 0.00 2.69
5264 5398 3.451141 TTCCGCTTGTTTTGCTTTCAT 57.549 38.095 0.00 0.00 0.00 2.57
5265 5399 3.451141 TCCGCTTGTTTTGCTTTCATT 57.549 38.095 0.00 0.00 0.00 2.57
5266 5400 3.791245 TCCGCTTGTTTTGCTTTCATTT 58.209 36.364 0.00 0.00 0.00 2.32
5267 5401 3.801594 TCCGCTTGTTTTGCTTTCATTTC 59.198 39.130 0.00 0.00 0.00 2.17
5268 5402 3.059665 CCGCTTGTTTTGCTTTCATTTCC 60.060 43.478 0.00 0.00 0.00 3.13
5269 5403 3.803778 CGCTTGTTTTGCTTTCATTTCCT 59.196 39.130 0.00 0.00 0.00 3.36
5270 5404 4.981674 CGCTTGTTTTGCTTTCATTTCCTA 59.018 37.500 0.00 0.00 0.00 2.94
5271 5405 5.117592 CGCTTGTTTTGCTTTCATTTCCTAG 59.882 40.000 0.00 0.00 0.00 3.02
5272 5406 5.406477 GCTTGTTTTGCTTTCATTTCCTAGG 59.594 40.000 0.82 0.82 0.00 3.02
5273 5407 6.478512 TTGTTTTGCTTTCATTTCCTAGGT 57.521 33.333 9.08 0.00 0.00 3.08
5274 5408 5.841810 TGTTTTGCTTTCATTTCCTAGGTG 58.158 37.500 9.08 0.00 0.00 4.00
5275 5409 5.596361 TGTTTTGCTTTCATTTCCTAGGTGA 59.404 36.000 9.08 2.18 0.00 4.02
5276 5410 5.964958 TTTGCTTTCATTTCCTAGGTGAG 57.035 39.130 9.08 0.00 0.00 3.51
5277 5411 4.908601 TGCTTTCATTTCCTAGGTGAGA 57.091 40.909 9.08 0.00 0.00 3.27
5278 5412 5.241403 TGCTTTCATTTCCTAGGTGAGAA 57.759 39.130 9.08 6.64 0.00 2.87
5279 5413 5.630121 TGCTTTCATTTCCTAGGTGAGAAA 58.370 37.500 9.08 13.29 36.48 2.52
5280 5414 6.068010 TGCTTTCATTTCCTAGGTGAGAAAA 58.932 36.000 9.08 1.58 35.72 2.29
5281 5415 6.721208 TGCTTTCATTTCCTAGGTGAGAAAAT 59.279 34.615 9.08 4.12 35.72 1.82
5282 5416 7.888021 TGCTTTCATTTCCTAGGTGAGAAAATA 59.112 33.333 9.08 5.06 35.72 1.40
5283 5417 8.907885 GCTTTCATTTCCTAGGTGAGAAAATAT 58.092 33.333 9.08 0.00 35.72 1.28
5285 5419 9.753674 TTTCATTTCCTAGGTGAGAAAATATGT 57.246 29.630 9.08 0.00 35.72 2.29
5286 5420 8.737168 TCATTTCCTAGGTGAGAAAATATGTG 57.263 34.615 9.08 0.00 35.72 3.21
5287 5421 8.548025 TCATTTCCTAGGTGAGAAAATATGTGA 58.452 33.333 9.08 0.00 35.72 3.58
5288 5422 9.177608 CATTTCCTAGGTGAGAAAATATGTGAA 57.822 33.333 9.08 0.00 35.72 3.18
5289 5423 8.561738 TTTCCTAGGTGAGAAAATATGTGAAC 57.438 34.615 9.08 0.00 0.00 3.18
5290 5424 7.252612 TCCTAGGTGAGAAAATATGTGAACA 57.747 36.000 9.08 0.00 0.00 3.18
5291 5425 7.103641 TCCTAGGTGAGAAAATATGTGAACAC 58.896 38.462 9.08 0.00 0.00 3.32
5292 5426 6.316390 CCTAGGTGAGAAAATATGTGAACACC 59.684 42.308 0.00 0.00 44.36 4.16
5294 5428 6.575162 GGTGAGAAAATATGTGAACACCTT 57.425 37.500 0.00 0.00 41.89 3.50
5295 5429 6.981722 GGTGAGAAAATATGTGAACACCTTT 58.018 36.000 0.00 0.00 41.89 3.11
5296 5430 7.433680 GGTGAGAAAATATGTGAACACCTTTT 58.566 34.615 0.00 6.21 41.89 2.27
5297 5431 7.926018 GGTGAGAAAATATGTGAACACCTTTTT 59.074 33.333 0.00 6.05 41.89 1.94
5298 5432 8.968242 GTGAGAAAATATGTGAACACCTTTTTC 58.032 33.333 18.27 18.27 35.28 2.29
5299 5433 8.690884 TGAGAAAATATGTGAACACCTTTTTCA 58.309 29.630 22.76 15.55 36.27 2.69
5300 5434 9.528018 GAGAAAATATGTGAACACCTTTTTCAA 57.472 29.630 22.76 1.99 36.27 2.69
5301 5435 9.883142 AGAAAATATGTGAACACCTTTTTCAAA 57.117 25.926 22.76 1.54 36.27 2.69
5304 5438 7.692908 ATATGTGAACACCTTTTTCAAAACG 57.307 32.000 2.46 0.00 34.78 3.60
5305 5439 4.238514 TGTGAACACCTTTTTCAAAACGG 58.761 39.130 3.84 3.84 34.78 4.44
5306 5440 3.615056 GTGAACACCTTTTTCAAAACGGG 59.385 43.478 10.03 5.16 34.78 5.28
5307 5441 3.510360 TGAACACCTTTTTCAAAACGGGA 59.490 39.130 10.03 0.00 29.89 5.14
5308 5442 3.513680 ACACCTTTTTCAAAACGGGAC 57.486 42.857 10.03 0.00 0.00 4.46
5309 5443 3.093814 ACACCTTTTTCAAAACGGGACT 58.906 40.909 10.03 0.00 0.00 3.85
5310 5444 3.512329 ACACCTTTTTCAAAACGGGACTT 59.488 39.130 10.03 0.00 0.00 3.01
5311 5445 4.705991 ACACCTTTTTCAAAACGGGACTTA 59.294 37.500 10.03 0.00 0.00 2.24
5312 5446 5.185442 ACACCTTTTTCAAAACGGGACTTAA 59.815 36.000 10.03 0.00 0.00 1.85
5313 5447 5.517411 CACCTTTTTCAAAACGGGACTTAAC 59.483 40.000 10.03 0.00 0.00 2.01
5314 5448 5.045215 CCTTTTTCAAAACGGGACTTAACC 58.955 41.667 0.00 0.00 0.00 2.85
5315 5449 5.394333 CCTTTTTCAAAACGGGACTTAACCA 60.394 40.000 0.00 0.00 0.00 3.67
5316 5450 5.656213 TTTTCAAAACGGGACTTAACCAA 57.344 34.783 0.00 0.00 0.00 3.67
5317 5451 4.904253 TTCAAAACGGGACTTAACCAAG 57.096 40.909 0.00 0.00 37.81 3.61
5330 5464 4.631813 ACTTAACCAAGTCTCAATCGATGC 59.368 41.667 0.00 0.00 41.25 3.91
5331 5465 3.340814 AACCAAGTCTCAATCGATGCT 57.659 42.857 0.00 0.00 0.00 3.79
5332 5466 4.471904 AACCAAGTCTCAATCGATGCTA 57.528 40.909 0.00 0.00 0.00 3.49
5333 5467 4.679373 ACCAAGTCTCAATCGATGCTAT 57.321 40.909 0.00 0.00 0.00 2.97
5334 5468 5.791336 ACCAAGTCTCAATCGATGCTATA 57.209 39.130 0.00 0.00 0.00 1.31
5335 5469 6.352016 ACCAAGTCTCAATCGATGCTATAT 57.648 37.500 0.00 0.00 0.00 0.86
5336 5470 6.763355 ACCAAGTCTCAATCGATGCTATATT 58.237 36.000 0.00 0.00 0.00 1.28
5337 5471 6.870965 ACCAAGTCTCAATCGATGCTATATTC 59.129 38.462 0.00 0.00 0.00 1.75
5338 5472 6.034363 CCAAGTCTCAATCGATGCTATATTCG 59.966 42.308 0.00 0.00 36.72 3.34
5339 5473 6.260870 AGTCTCAATCGATGCTATATTCGT 57.739 37.500 0.00 0.00 36.74 3.85
5340 5474 7.379098 AGTCTCAATCGATGCTATATTCGTA 57.621 36.000 0.00 0.00 36.74 3.43
5341 5475 7.468441 AGTCTCAATCGATGCTATATTCGTAG 58.532 38.462 0.00 0.00 36.74 3.51
5342 5476 7.334671 AGTCTCAATCGATGCTATATTCGTAGA 59.665 37.037 0.00 0.00 36.74 2.59
5343 5477 7.963465 GTCTCAATCGATGCTATATTCGTAGAA 59.037 37.037 0.00 0.00 45.90 2.10
5344 5478 8.678199 TCTCAATCGATGCTATATTCGTAGAAT 58.322 33.333 0.00 0.79 45.90 2.40
5345 5479 9.295214 CTCAATCGATGCTATATTCGTAGAATT 57.705 33.333 0.00 0.00 45.90 2.17
5346 5480 9.639601 TCAATCGATGCTATATTCGTAGAATTT 57.360 29.630 0.00 0.00 45.90 1.82
5350 5484 9.058424 TCGATGCTATATTCGTAGAATTTTACG 57.942 33.333 19.46 19.46 45.90 3.18
5351 5485 8.847567 CGATGCTATATTCGTAGAATTTTACGT 58.152 33.333 23.09 11.30 45.90 3.57
5354 5488 9.518906 TGCTATATTCGTAGAATTTTACGTTGA 57.481 29.630 23.09 13.56 45.90 3.18
5355 5489 9.990888 GCTATATTCGTAGAATTTTACGTTGAG 57.009 33.333 23.09 16.08 45.90 3.02
5359 5493 7.515957 TTCGTAGAATTTTACGTTGAGATCC 57.484 36.000 23.09 0.00 45.90 3.36
5360 5494 5.740569 TCGTAGAATTTTACGTTGAGATCCG 59.259 40.000 23.09 0.05 44.95 4.18
5361 5495 5.514204 CGTAGAATTTTACGTTGAGATCCGT 59.486 40.000 17.79 0.55 41.01 4.69
5362 5496 5.779806 AGAATTTTACGTTGAGATCCGTG 57.220 39.130 0.00 0.00 37.91 4.94
5363 5497 4.092968 AGAATTTTACGTTGAGATCCGTGC 59.907 41.667 0.00 0.00 37.91 5.34
5364 5498 2.442212 TTTACGTTGAGATCCGTGCA 57.558 45.000 0.00 0.00 37.91 4.57
5365 5499 2.442212 TTACGTTGAGATCCGTGCAA 57.558 45.000 0.00 0.00 37.91 4.08
5366 5500 2.442212 TACGTTGAGATCCGTGCAAA 57.558 45.000 0.00 0.00 37.91 3.68
5367 5501 1.588674 ACGTTGAGATCCGTGCAAAA 58.411 45.000 0.00 0.00 35.69 2.44
5368 5502 2.151202 ACGTTGAGATCCGTGCAAAAT 58.849 42.857 0.00 0.00 35.69 1.82
5369 5503 2.552315 ACGTTGAGATCCGTGCAAAATT 59.448 40.909 0.00 0.00 35.69 1.82
5370 5504 3.004315 ACGTTGAGATCCGTGCAAAATTT 59.996 39.130 0.00 0.00 35.69 1.82
5371 5505 3.980775 CGTTGAGATCCGTGCAAAATTTT 59.019 39.130 0.00 0.00 0.00 1.82
5372 5506 4.088496 CGTTGAGATCCGTGCAAAATTTTC 59.912 41.667 0.00 0.00 0.00 2.29
5373 5507 5.222631 GTTGAGATCCGTGCAAAATTTTCT 58.777 37.500 0.00 0.00 0.00 2.52
5374 5508 5.452078 TGAGATCCGTGCAAAATTTTCTT 57.548 34.783 0.00 0.00 0.00 2.52
5375 5509 5.841810 TGAGATCCGTGCAAAATTTTCTTT 58.158 33.333 0.00 0.00 0.00 2.52
5376 5510 6.279882 TGAGATCCGTGCAAAATTTTCTTTT 58.720 32.000 0.00 0.00 0.00 2.27
5377 5511 6.420604 TGAGATCCGTGCAAAATTTTCTTTTC 59.579 34.615 0.00 0.00 0.00 2.29
5378 5512 6.515832 AGATCCGTGCAAAATTTTCTTTTCT 58.484 32.000 0.00 0.00 0.00 2.52
5379 5513 6.986231 AGATCCGTGCAAAATTTTCTTTTCTT 59.014 30.769 0.00 0.00 0.00 2.52
5380 5514 6.976636 TCCGTGCAAAATTTTCTTTTCTTT 57.023 29.167 0.00 0.00 0.00 2.52
5381 5515 7.371126 TCCGTGCAAAATTTTCTTTTCTTTT 57.629 28.000 0.00 0.00 0.00 2.27
5382 5516 7.811653 TCCGTGCAAAATTTTCTTTTCTTTTT 58.188 26.923 0.00 0.00 0.00 1.94
5383 5517 7.960195 TCCGTGCAAAATTTTCTTTTCTTTTTC 59.040 29.630 0.00 0.00 0.00 2.29
5384 5518 7.962373 CCGTGCAAAATTTTCTTTTCTTTTTCT 59.038 29.630 0.00 0.00 0.00 2.52
5385 5519 9.328721 CGTGCAAAATTTTCTTTTCTTTTTCTT 57.671 25.926 0.00 0.00 0.00 2.52
5435 5569 5.470047 ACTTGGTTAAGTCTCAATCGACT 57.530 39.130 0.00 0.00 43.53 4.18
5436 5570 6.585695 ACTTGGTTAAGTCTCAATCGACTA 57.414 37.500 0.00 0.00 43.53 2.59
5437 5571 6.989659 ACTTGGTTAAGTCTCAATCGACTAA 58.010 36.000 0.00 0.00 43.53 2.24
5438 5572 7.091443 ACTTGGTTAAGTCTCAATCGACTAAG 58.909 38.462 0.00 0.00 43.53 2.18
5439 5573 6.829229 TGGTTAAGTCTCAATCGACTAAGA 57.171 37.500 0.00 0.00 43.14 2.10
5440 5574 6.618811 TGGTTAAGTCTCAATCGACTAAGAC 58.381 40.000 12.61 12.61 43.14 3.01
5441 5575 6.035217 GGTTAAGTCTCAATCGACTAAGACC 58.965 44.000 15.50 0.00 43.14 3.85
5442 5576 6.127675 GGTTAAGTCTCAATCGACTAAGACCT 60.128 42.308 15.50 8.52 43.14 3.85
5443 5577 7.066766 GGTTAAGTCTCAATCGACTAAGACCTA 59.933 40.741 15.50 7.75 43.14 3.08
5444 5578 8.457261 GTTAAGTCTCAATCGACTAAGACCTAA 58.543 37.037 15.50 11.93 43.14 2.69
5445 5579 6.687081 AGTCTCAATCGACTAAGACCTAAG 57.313 41.667 15.50 0.00 42.19 2.18
5446 5580 5.066764 AGTCTCAATCGACTAAGACCTAAGC 59.933 44.000 15.50 0.00 42.19 3.09
5447 5581 4.948004 TCTCAATCGACTAAGACCTAAGCA 59.052 41.667 0.00 0.00 0.00 3.91
5448 5582 4.995124 TCAATCGACTAAGACCTAAGCAC 58.005 43.478 0.00 0.00 0.00 4.40
5449 5583 4.461431 TCAATCGACTAAGACCTAAGCACA 59.539 41.667 0.00 0.00 0.00 4.57
5450 5584 3.844577 TCGACTAAGACCTAAGCACAC 57.155 47.619 0.00 0.00 0.00 3.82
5451 5585 2.490903 TCGACTAAGACCTAAGCACACC 59.509 50.000 0.00 0.00 0.00 4.16
5452 5586 2.492484 CGACTAAGACCTAAGCACACCT 59.508 50.000 0.00 0.00 0.00 4.00
5453 5587 3.693085 CGACTAAGACCTAAGCACACCTA 59.307 47.826 0.00 0.00 0.00 3.08
5454 5588 4.338682 CGACTAAGACCTAAGCACACCTAT 59.661 45.833 0.00 0.00 0.00 2.57
5455 5589 5.163540 CGACTAAGACCTAAGCACACCTATT 60.164 44.000 0.00 0.00 0.00 1.73
5456 5590 6.622427 ACTAAGACCTAAGCACACCTATTT 57.378 37.500 0.00 0.00 0.00 1.40
5457 5591 6.641474 ACTAAGACCTAAGCACACCTATTTC 58.359 40.000 0.00 0.00 0.00 2.17
5458 5592 5.499004 AAGACCTAAGCACACCTATTTCA 57.501 39.130 0.00 0.00 0.00 2.69
5459 5593 5.499004 AGACCTAAGCACACCTATTTCAA 57.501 39.130 0.00 0.00 0.00 2.69
5460 5594 5.876357 AGACCTAAGCACACCTATTTCAAA 58.124 37.500 0.00 0.00 0.00 2.69
5461 5595 6.303839 AGACCTAAGCACACCTATTTCAAAA 58.696 36.000 0.00 0.00 0.00 2.44
5462 5596 6.948309 AGACCTAAGCACACCTATTTCAAAAT 59.052 34.615 0.00 0.00 0.00 1.82
5463 5597 7.121315 AGACCTAAGCACACCTATTTCAAAATC 59.879 37.037 0.00 0.00 0.00 2.17
5464 5598 6.719370 ACCTAAGCACACCTATTTCAAAATCA 59.281 34.615 0.00 0.00 0.00 2.57
5465 5599 7.029563 CCTAAGCACACCTATTTCAAAATCAC 58.970 38.462 0.00 0.00 0.00 3.06
5466 5600 6.403866 AAGCACACCTATTTCAAAATCACA 57.596 33.333 0.00 0.00 0.00 3.58
5467 5601 6.594788 AGCACACCTATTTCAAAATCACAT 57.405 33.333 0.00 0.00 0.00 3.21
5468 5602 6.392354 AGCACACCTATTTCAAAATCACATG 58.608 36.000 0.00 0.00 0.00 3.21
5469 5603 6.209192 AGCACACCTATTTCAAAATCACATGA 59.791 34.615 0.00 0.00 0.00 3.07
5470 5604 6.529125 GCACACCTATTTCAAAATCACATGAG 59.471 38.462 0.00 0.00 0.00 2.90
5471 5605 7.596494 CACACCTATTTCAAAATCACATGAGT 58.404 34.615 0.00 0.00 0.00 3.41
5472 5606 8.729756 CACACCTATTTCAAAATCACATGAGTA 58.270 33.333 0.00 0.00 0.00 2.59
5473 5607 9.466497 ACACCTATTTCAAAATCACATGAGTAT 57.534 29.630 0.00 0.00 0.00 2.12
5501 5635 9.921637 TTTTCTAACATATGGAAACAACCATTC 57.078 29.630 7.80 0.00 47.00 2.67
5502 5636 8.877864 TTCTAACATATGGAAACAACCATTCT 57.122 30.769 7.80 0.00 47.00 2.40
5503 5637 8.877864 TCTAACATATGGAAACAACCATTCTT 57.122 30.769 7.80 0.00 47.00 2.52
5504 5638 9.967451 TCTAACATATGGAAACAACCATTCTTA 57.033 29.630 7.80 0.39 47.00 2.10
5513 5647 9.541143 TGGAAACAACCATTCTTATTTCTTTTC 57.459 29.630 0.00 0.00 37.44 2.29
5514 5648 9.541143 GGAAACAACCATTCTTATTTCTTTTCA 57.459 29.630 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.324178 ACTTGACTAGCTCGTTAATCAAAGAT 58.676 34.615 0.00 0.00 0.00 2.40
1 2 6.688578 ACTTGACTAGCTCGTTAATCAAAGA 58.311 36.000 0.00 0.00 0.00 2.52
2 3 6.952935 ACTTGACTAGCTCGTTAATCAAAG 57.047 37.500 0.00 0.00 0.00 2.77
3 4 7.823665 TCTACTTGACTAGCTCGTTAATCAAA 58.176 34.615 0.00 0.00 0.00 2.69
4 5 7.387119 TCTACTTGACTAGCTCGTTAATCAA 57.613 36.000 0.00 0.00 0.00 2.57
5 6 6.038382 CCTCTACTTGACTAGCTCGTTAATCA 59.962 42.308 0.00 0.00 0.00 2.57
6 7 6.432107 CCTCTACTTGACTAGCTCGTTAATC 58.568 44.000 0.00 0.00 0.00 1.75
7 8 5.221087 GCCTCTACTTGACTAGCTCGTTAAT 60.221 44.000 0.00 0.00 0.00 1.40
8 9 4.096081 GCCTCTACTTGACTAGCTCGTTAA 59.904 45.833 0.00 0.00 0.00 2.01
9 10 3.626670 GCCTCTACTTGACTAGCTCGTTA 59.373 47.826 0.00 0.00 0.00 3.18
10 11 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
11 12 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
12 13 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
13 14 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
14 15 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
15 16 5.766174 ACTAGTATGCCTCTACTTGACTAGC 59.234 44.000 0.00 0.00 38.86 3.42
16 17 6.993308 TCACTAGTATGCCTCTACTTGACTAG 59.007 42.308 0.00 0.00 40.35 2.57
17 18 6.766944 GTCACTAGTATGCCTCTACTTGACTA 59.233 42.308 0.00 0.00 36.95 2.59
18 19 5.591067 GTCACTAGTATGCCTCTACTTGACT 59.409 44.000 0.00 0.00 36.95 3.41
19 20 5.357314 TGTCACTAGTATGCCTCTACTTGAC 59.643 44.000 0.00 11.98 38.64 3.18
20 21 5.357314 GTGTCACTAGTATGCCTCTACTTGA 59.643 44.000 0.00 0.18 33.96 3.02
21 22 5.358442 AGTGTCACTAGTATGCCTCTACTTG 59.642 44.000 2.87 0.00 33.96 3.16
22 23 5.511363 AGTGTCACTAGTATGCCTCTACTT 58.489 41.667 2.87 0.00 33.96 2.24
23 24 5.104277 AGAGTGTCACTAGTATGCCTCTACT 60.104 44.000 5.21 0.00 36.04 2.57
24 25 5.008217 CAGAGTGTCACTAGTATGCCTCTAC 59.992 48.000 5.21 0.00 0.00 2.59
25 26 5.126779 CAGAGTGTCACTAGTATGCCTCTA 58.873 45.833 5.21 0.00 0.00 2.43
26 27 3.951037 CAGAGTGTCACTAGTATGCCTCT 59.049 47.826 5.21 1.89 0.00 3.69
27 28 3.697045 ACAGAGTGTCACTAGTATGCCTC 59.303 47.826 5.21 0.00 0.00 4.70
28 29 3.702792 ACAGAGTGTCACTAGTATGCCT 58.297 45.455 5.21 0.00 0.00 4.75
29 30 4.457834 AACAGAGTGTCACTAGTATGCC 57.542 45.455 5.21 0.00 0.00 4.40
30 31 5.230942 ACAAACAGAGTGTCACTAGTATGC 58.769 41.667 5.21 0.00 0.00 3.14
31 32 6.682746 AGACAAACAGAGTGTCACTAGTATG 58.317 40.000 5.21 5.56 46.44 2.39
32 33 6.902771 AGACAAACAGAGTGTCACTAGTAT 57.097 37.500 5.21 0.00 46.44 2.12
33 34 7.447545 ACATAGACAAACAGAGTGTCACTAGTA 59.552 37.037 5.21 0.00 46.44 1.82
34 35 6.265649 ACATAGACAAACAGAGTGTCACTAGT 59.734 38.462 5.21 5.11 46.44 2.57
35 36 6.682746 ACATAGACAAACAGAGTGTCACTAG 58.317 40.000 5.21 4.44 46.44 2.57
36 37 6.650427 ACATAGACAAACAGAGTGTCACTA 57.350 37.500 5.21 0.00 46.44 2.74
37 38 5.537300 ACATAGACAAACAGAGTGTCACT 57.463 39.130 4.81 4.81 46.44 3.41
38 39 7.598869 TGAATACATAGACAAACAGAGTGTCAC 59.401 37.037 7.26 0.00 46.44 3.67
39 40 7.598869 GTGAATACATAGACAAACAGAGTGTCA 59.401 37.037 7.26 0.00 46.44 3.58
40 41 7.598869 TGTGAATACATAGACAAACAGAGTGTC 59.401 37.037 0.00 0.00 44.75 3.67
41 42 7.385205 GTGTGAATACATAGACAAACAGAGTGT 59.615 37.037 0.00 0.00 39.39 3.55
42 43 7.384932 TGTGTGAATACATAGACAAACAGAGTG 59.615 37.037 0.00 0.00 39.39 3.51
43 44 7.441836 TGTGTGAATACATAGACAAACAGAGT 58.558 34.615 0.00 0.00 39.39 3.24
44 45 7.889589 TGTGTGAATACATAGACAAACAGAG 57.110 36.000 0.00 0.00 39.39 3.35
45 46 7.877612 ACATGTGTGAATACATAGACAAACAGA 59.122 33.333 0.00 0.00 39.17 3.41
46 47 8.032952 ACATGTGTGAATACATAGACAAACAG 57.967 34.615 0.00 0.00 39.17 3.16
47 48 7.977789 ACATGTGTGAATACATAGACAAACA 57.022 32.000 0.00 0.00 39.17 2.83
48 49 9.151471 AGTACATGTGTGAATACATAGACAAAC 57.849 33.333 9.11 0.00 39.17 2.93
57 58 8.705134 CGAAAACTTAGTACATGTGTGAATACA 58.295 33.333 9.11 0.00 34.63 2.29
58 59 8.166706 CCGAAAACTTAGTACATGTGTGAATAC 58.833 37.037 9.11 0.00 0.00 1.89
59 60 7.874016 ACCGAAAACTTAGTACATGTGTGAATA 59.126 33.333 9.11 0.00 0.00 1.75
60 61 6.708949 ACCGAAAACTTAGTACATGTGTGAAT 59.291 34.615 9.11 0.00 0.00 2.57
61 62 6.050432 ACCGAAAACTTAGTACATGTGTGAA 58.950 36.000 9.11 0.00 0.00 3.18
62 63 5.603596 ACCGAAAACTTAGTACATGTGTGA 58.396 37.500 9.11 0.00 0.00 3.58
63 64 5.917541 ACCGAAAACTTAGTACATGTGTG 57.082 39.130 9.11 0.00 0.00 3.82
64 65 8.611654 ATTTACCGAAAACTTAGTACATGTGT 57.388 30.769 9.11 0.00 0.00 3.72
65 66 9.962759 GTATTTACCGAAAACTTAGTACATGTG 57.037 33.333 9.11 0.00 0.00 3.21
66 67 9.709495 TGTATTTACCGAAAACTTAGTACATGT 57.291 29.630 2.69 2.69 0.00 3.21
75 76 9.287373 TGGTAGAATTGTATTTACCGAAAACTT 57.713 29.630 0.00 0.00 38.69 2.66
76 77 8.851541 TGGTAGAATTGTATTTACCGAAAACT 57.148 30.769 0.00 0.00 38.69 2.66
77 78 9.498307 CATGGTAGAATTGTATTTACCGAAAAC 57.502 33.333 0.00 0.00 38.69 2.43
78 79 9.451002 TCATGGTAGAATTGTATTTACCGAAAA 57.549 29.630 0.00 0.00 38.69 2.29
79 80 9.621629 ATCATGGTAGAATTGTATTTACCGAAA 57.378 29.630 0.00 0.00 38.69 3.46
162 163 8.057623 CCATCTATATTGAAGGAAATATGCCCT 58.942 37.037 2.70 0.00 35.05 5.19
163 164 7.201857 GCCATCTATATTGAAGGAAATATGCCC 60.202 40.741 11.84 0.00 35.05 5.36
164 165 7.559170 AGCCATCTATATTGAAGGAAATATGCC 59.441 37.037 11.84 0.00 35.05 4.40
165 166 8.517062 AGCCATCTATATTGAAGGAAATATGC 57.483 34.615 11.84 0.00 35.05 3.14
219 221 4.019174 ACTCCCTTCGTCCGAGTTTATTA 58.981 43.478 0.00 0.00 33.01 0.98
237 239 6.246420 TCGTGTGTTACTACTCTTTACTCC 57.754 41.667 0.00 0.00 0.00 3.85
244 246 4.785511 AATGCTCGTGTGTTACTACTCT 57.214 40.909 0.00 0.00 0.00 3.24
245 247 5.004535 GCTAAATGCTCGTGTGTTACTACTC 59.995 44.000 0.00 0.00 38.95 2.59
322 324 1.519751 CCCAAATTTGTGTCGGCGGA 61.520 55.000 16.73 0.00 0.00 5.54
345 347 3.323403 AGATCAGATAGCTGTTAGGTGGC 59.677 47.826 8.04 0.00 42.84 5.01
389 391 1.070134 AGTTGTGCTAGGCAGTCGAAA 59.930 47.619 0.00 0.00 40.08 3.46
414 416 2.180204 CCATTGGTAAGCGGCCGAG 61.180 63.158 33.48 0.00 0.00 4.63
445 447 3.684788 CGTGTCCAACTTTCTCCCTATTG 59.315 47.826 0.00 0.00 0.00 1.90
446 448 3.307480 CCGTGTCCAACTTTCTCCCTATT 60.307 47.826 0.00 0.00 0.00 1.73
474 476 3.071206 GAGAGCTCCTCCACCGCA 61.071 66.667 10.93 0.00 35.87 5.69
531 533 4.432980 TTCCTTTCTCTCCTCCGTTTTT 57.567 40.909 0.00 0.00 0.00 1.94
534 536 3.240302 TCTTTCCTTTCTCTCCTCCGTT 58.760 45.455 0.00 0.00 0.00 4.44
538 540 6.382859 ACCTTATCTCTTTCCTTTCTCTCCTC 59.617 42.308 0.00 0.00 0.00 3.71
586 588 6.294508 CGACAGAAATAAACCAATCCAAAGGT 60.295 38.462 0.00 0.00 40.61 3.50
587 589 6.092748 CGACAGAAATAAACCAATCCAAAGG 58.907 40.000 0.00 0.00 0.00 3.11
750 782 3.259876 AGAGTAAAGTAACCACGATGGCA 59.740 43.478 0.00 0.00 42.67 4.92
797 829 6.963805 GCATGTGACTTTAGAGTTTAGAATGC 59.036 38.462 0.00 0.00 35.88 3.56
816 848 2.173519 AGATGGGAAACTTGGCATGTG 58.826 47.619 6.80 0.00 0.00 3.21
862 896 4.308458 CGGTTGGGGCACGTGAGA 62.308 66.667 22.23 0.00 0.00 3.27
878 912 1.532868 CTGCTCTCAAGGGTTTGTTCG 59.467 52.381 0.00 0.00 35.73 3.95
909 943 1.533033 CCTGGGGTTGGGTTGGTTC 60.533 63.158 0.00 0.00 0.00 3.62
910 944 2.612251 CCTGGGGTTGGGTTGGTT 59.388 61.111 0.00 0.00 0.00 3.67
1322 1361 2.862448 CGTCGTCGTCGTCGTTCC 60.862 66.667 12.51 1.41 41.73 3.62
1324 1363 2.127980 GTCGTCGTCGTCGTCGTT 60.128 61.111 18.44 0.00 45.27 3.85
1325 1364 4.400776 CGTCGTCGTCGTCGTCGT 62.401 66.667 18.87 0.00 45.27 4.34
1326 1365 4.108437 TCGTCGTCGTCGTCGTCG 62.108 66.667 20.39 20.39 45.27 5.12
1327 1366 1.665544 TAGTCGTCGTCGTCGTCGTC 61.666 60.000 18.44 14.10 45.27 4.20
1328 1367 1.729484 TAGTCGTCGTCGTCGTCGT 60.729 57.895 18.44 5.97 45.27 4.34
1329 1368 1.294798 GTAGTCGTCGTCGTCGTCG 60.295 63.158 14.18 14.18 46.06 5.12
1343 1382 2.757099 CCTGCGGGTACGGGTAGT 60.757 66.667 2.29 0.00 41.36 2.73
1439 1478 2.034066 CCGGTGCACCAAGGACAT 59.966 61.111 34.16 0.00 40.89 3.06
1509 1548 1.741401 CAAAGATCACCGAGCGCCA 60.741 57.895 2.29 0.00 0.00 5.69
1539 1589 3.261897 AGACCCACTCTAATCACCACAAG 59.738 47.826 0.00 0.00 0.00 3.16
1594 1644 1.429463 GCAGGTAATCCGGCGATTAG 58.571 55.000 9.30 0.00 44.00 1.73
1595 1645 3.599412 GCAGGTAATCCGGCGATTA 57.401 52.632 9.30 8.05 44.00 1.75
1596 1646 4.456806 GCAGGTAATCCGGCGATT 57.543 55.556 9.30 9.10 44.00 3.34
1602 1652 2.386661 AACACAGAGCAGGTAATCCG 57.613 50.000 0.00 0.00 39.05 4.18
1642 1693 3.017323 CGCAGGCAAATCCTAGCG 58.983 61.111 11.21 11.21 45.52 4.26
1724 1775 1.271856 TCTTGGACCATGGCGACTAA 58.728 50.000 13.04 7.19 0.00 2.24
1768 1819 6.878389 GGGAAACTGGCAATAAATGAATGAAA 59.122 34.615 0.00 0.00 0.00 2.69
1845 1896 4.080356 TGTCCAGCTTAGTCATAAAGGCAT 60.080 41.667 0.00 0.00 0.00 4.40
1972 2026 5.307716 AGGGGTGACATCAATTCAACATTTT 59.692 36.000 0.00 0.00 31.78 1.82
2170 2235 4.515028 TCGATCCCGGTACATATCCTAT 57.485 45.455 0.00 0.00 36.24 2.57
2205 2270 2.940410 ACACGGCCTGGTAAATTTATCG 59.060 45.455 0.00 0.00 0.00 2.92
2222 2287 6.638873 TGAAACAAAAGTATGGCATAAACACG 59.361 34.615 9.14 1.14 0.00 4.49
2364 2429 8.009974 GCTTAAGCACCAAATAATATACAGTCG 58.990 37.037 22.59 0.00 41.59 4.18
2422 2487 7.613022 ACATCATTCCATCTTTTACACAGATGT 59.387 33.333 8.68 0.00 44.33 3.06
2423 2488 7.993101 ACATCATTCCATCTTTTACACAGATG 58.007 34.615 3.35 3.35 45.09 2.90
2424 2489 7.830697 TGACATCATTCCATCTTTTACACAGAT 59.169 33.333 0.00 0.00 0.00 2.90
2425 2490 7.167535 TGACATCATTCCATCTTTTACACAGA 58.832 34.615 0.00 0.00 0.00 3.41
2443 2508 2.615240 CCAACGGATTCCACTGACATCA 60.615 50.000 3.09 0.00 0.00 3.07
2470 2535 1.811266 CCGTGTGGAATCAGCTCGG 60.811 63.158 0.00 3.38 37.49 4.63
2548 2613 3.243724 CCCCTATATATAGCTGGCCTCC 58.756 54.545 13.49 0.00 0.00 4.30
2606 2671 6.207691 AGCACCGTTTATCTAAAATGCATT 57.792 33.333 5.99 5.99 35.21 3.56
2640 2705 1.382146 GAGACATGTCCCCCGGGTA 60.382 63.158 21.85 3.73 36.47 3.69
2644 2709 0.391661 CAACTGAGACATGTCCCCCG 60.392 60.000 22.21 12.84 0.00 5.73
2718 2783 5.453567 AATCAAGTTTAGAAGGCCACAAC 57.546 39.130 5.01 0.00 0.00 3.32
2721 2786 5.966742 AGAAATCAAGTTTAGAAGGCCAC 57.033 39.130 5.01 0.00 0.00 5.01
2774 2839 3.557595 GGCATTCAAGAACCACGATCTAG 59.442 47.826 0.00 0.00 0.00 2.43
3101 3166 5.597806 CAGGACTAGGATATTTAACACGCA 58.402 41.667 0.00 0.00 0.00 5.24
3102 3167 4.448060 GCAGGACTAGGATATTTAACACGC 59.552 45.833 0.00 0.00 0.00 5.34
3104 3169 6.702282 GTCAGCAGGACTAGGATATTTAACAC 59.298 42.308 0.00 0.00 43.46 3.32
3105 3170 6.817184 GTCAGCAGGACTAGGATATTTAACA 58.183 40.000 0.00 0.00 43.46 2.41
3139 3204 5.997843 TCTTAACTTATTAGAAGGGTGGCC 58.002 41.667 0.00 0.00 0.00 5.36
3159 3224 7.572910 GCGGCAAATTTTGTTGGAATTATTCTT 60.573 33.333 10.65 0.00 0.00 2.52
3333 3456 0.395862 TTAGCCTCTCCGGACTCCTG 60.396 60.000 0.00 0.00 33.16 3.86
3340 3463 4.402056 TCTTACAATTTAGCCTCTCCGG 57.598 45.455 0.00 0.00 0.00 5.14
3619 3742 3.811083 TCCTTGCCTTCTTTACGTGAAA 58.189 40.909 0.00 0.00 0.00 2.69
3693 3816 0.387622 CAACTTGCTCACCCATTGCG 60.388 55.000 0.00 0.00 0.00 4.85
3873 3996 1.471684 CTGGTCAAGCTTGCCAATCTC 59.528 52.381 29.82 13.69 35.19 2.75
3921 4044 5.332707 TCACTCTTTTCATCACTCGTATCG 58.667 41.667 0.00 0.00 0.00 2.92
4088 4215 5.276270 GCATTGTGCGAAATGATAACATCT 58.724 37.500 13.69 0.00 39.46 2.90
4142 4269 7.175641 AGAGAGTAAAATGATTTTCACCACAGG 59.824 37.037 6.40 0.00 34.19 4.00
4199 4331 6.825284 CAAGCATTGTGACAAATTGTAACA 57.175 33.333 12.07 12.07 39.87 2.41
4232 4364 2.224548 CCGAGACCCCTTTGACTTCTTT 60.225 50.000 0.00 0.00 0.00 2.52
4343 4477 6.680810 TCTCCAACAACAAAGAAATGCATAG 58.319 36.000 0.00 0.00 0.00 2.23
4415 4549 8.153550 AGACAATAGAGTGGACATGGATTATTC 58.846 37.037 0.00 0.00 0.00 1.75
4432 4566 8.594550 GGTAGCTAAATGGGAATAGACAATAGA 58.405 37.037 0.00 0.00 0.00 1.98
4433 4567 7.545965 CGGTAGCTAAATGGGAATAGACAATAG 59.454 40.741 0.00 0.00 0.00 1.73
4434 4568 7.233962 TCGGTAGCTAAATGGGAATAGACAATA 59.766 37.037 0.00 0.00 0.00 1.90
4435 4569 6.042781 TCGGTAGCTAAATGGGAATAGACAAT 59.957 38.462 0.00 0.00 0.00 2.71
4436 4570 5.364446 TCGGTAGCTAAATGGGAATAGACAA 59.636 40.000 0.00 0.00 0.00 3.18
4437 4571 4.897076 TCGGTAGCTAAATGGGAATAGACA 59.103 41.667 0.00 0.00 0.00 3.41
4438 4572 5.464030 TCGGTAGCTAAATGGGAATAGAC 57.536 43.478 0.00 0.00 0.00 2.59
4520 4654 4.101741 ACTCTTCTACTTCTTGCACCTGTT 59.898 41.667 0.00 0.00 0.00 3.16
4679 4813 5.171339 ACTCCACTGCAAACTCTTATCAT 57.829 39.130 0.00 0.00 0.00 2.45
4700 4834 2.036089 GGGTCCGGATATCAGTCTTGAC 59.964 54.545 7.81 3.59 35.83 3.18
4757 4891 6.438425 TCACCGGTAACTAAGGTAAGAATCTT 59.562 38.462 6.87 0.00 36.34 2.40
4783 4917 3.682292 GACCTGCTTAGGGTGCCCG 62.682 68.421 0.98 0.00 41.95 6.13
4789 4923 1.517832 CGGTGAGACCTGCTTAGGG 59.482 63.158 0.00 0.00 35.66 3.53
4801 4935 3.589654 ATGTCGTGGTGGCGGTGAG 62.590 63.158 0.00 0.00 0.00 3.51
4808 4942 1.785768 TACGTCAAATGTCGTGGTGG 58.214 50.000 14.31 0.00 39.80 4.61
4815 4949 6.195868 TGAACACATGTTTACGTCAAATGTC 58.804 36.000 0.00 0.00 38.56 3.06
4824 4958 5.072823 CGAACTCATGAACACATGTTTACG 58.927 41.667 0.00 8.33 41.24 3.18
4870 5004 1.184431 TTGGGCCATGCACATTACAG 58.816 50.000 7.26 0.00 43.39 2.74
4886 5020 3.480470 TCACTTGCCTTCTCTCTTTTGG 58.520 45.455 0.00 0.00 0.00 3.28
4891 5025 6.080682 TCCATATATCACTTGCCTTCTCTCT 58.919 40.000 0.00 0.00 0.00 3.10
4901 5035 4.040829 TGCCCACTCTCCATATATCACTTG 59.959 45.833 0.00 0.00 0.00 3.16
4924 5058 4.349048 TGCATTTCTGGACAGGCTCTATAT 59.651 41.667 0.00 0.00 0.00 0.86
4925 5059 3.711190 TGCATTTCTGGACAGGCTCTATA 59.289 43.478 0.00 0.00 0.00 1.31
4966 5100 7.849804 TCTGCAGATTTAAGTTTGAGGATAC 57.150 36.000 13.74 0.00 0.00 2.24
4968 5102 6.888632 ACATCTGCAGATTTAAGTTTGAGGAT 59.111 34.615 26.70 0.00 31.21 3.24
4995 5129 9.787435 TGTAATTATAAGACCAACAGAACAACT 57.213 29.630 0.00 0.00 0.00 3.16
5040 5174 7.430441 TCATGATCCAAAATCAAGCATGTATG 58.570 34.615 0.00 0.00 34.75 2.39
5071 5205 5.158141 AGAATGCCCTAGATGAGAACCATA 58.842 41.667 0.00 0.00 35.17 2.74
5072 5206 3.979347 AGAATGCCCTAGATGAGAACCAT 59.021 43.478 0.00 0.00 38.43 3.55
5073 5207 3.387962 AGAATGCCCTAGATGAGAACCA 58.612 45.455 0.00 0.00 0.00 3.67
5074 5208 4.141620 TGAAGAATGCCCTAGATGAGAACC 60.142 45.833 0.00 0.00 0.00 3.62
5075 5209 5.028549 TGAAGAATGCCCTAGATGAGAAC 57.971 43.478 0.00 0.00 0.00 3.01
5102 5236 1.026182 CACTAATCTGCAAGCCCGCA 61.026 55.000 0.00 0.00 40.32 5.69
5103 5237 0.744414 TCACTAATCTGCAAGCCCGC 60.744 55.000 0.00 0.00 0.00 6.13
5104 5238 1.959042 ATCACTAATCTGCAAGCCCG 58.041 50.000 0.00 0.00 0.00 6.13
5105 5239 4.314121 CTCTATCACTAATCTGCAAGCCC 58.686 47.826 0.00 0.00 0.00 5.19
5106 5240 4.202305 ACCTCTATCACTAATCTGCAAGCC 60.202 45.833 0.00 0.00 0.00 4.35
5107 5241 4.749099 CACCTCTATCACTAATCTGCAAGC 59.251 45.833 0.00 0.00 0.00 4.01
5108 5242 5.752472 CACACCTCTATCACTAATCTGCAAG 59.248 44.000 0.00 0.00 0.00 4.01
5109 5243 5.187772 ACACACCTCTATCACTAATCTGCAA 59.812 40.000 0.00 0.00 0.00 4.08
5110 5244 4.711846 ACACACCTCTATCACTAATCTGCA 59.288 41.667 0.00 0.00 0.00 4.41
5111 5245 5.269505 ACACACCTCTATCACTAATCTGC 57.730 43.478 0.00 0.00 0.00 4.26
5112 5246 9.823647 AATAAACACACCTCTATCACTAATCTG 57.176 33.333 0.00 0.00 0.00 2.90
5115 5249 9.614792 GGAAATAAACACACCTCTATCACTAAT 57.385 33.333 0.00 0.00 0.00 1.73
5116 5250 8.822805 AGGAAATAAACACACCTCTATCACTAA 58.177 33.333 0.00 0.00 0.00 2.24
5117 5251 8.375493 AGGAAATAAACACACCTCTATCACTA 57.625 34.615 0.00 0.00 0.00 2.74
5118 5252 7.259088 AGGAAATAAACACACCTCTATCACT 57.741 36.000 0.00 0.00 0.00 3.41
5119 5253 7.541122 GAGGAAATAAACACACCTCTATCAC 57.459 40.000 0.00 0.00 42.41 3.06
5125 5259 4.938226 CCAGAGAGGAAATAAACACACCTC 59.062 45.833 0.00 0.00 44.97 3.85
5126 5260 4.351111 ACCAGAGAGGAAATAAACACACCT 59.649 41.667 0.00 0.00 41.22 4.00
5127 5261 4.455877 CACCAGAGAGGAAATAAACACACC 59.544 45.833 0.00 0.00 41.22 4.16
5128 5262 5.305585 TCACCAGAGAGGAAATAAACACAC 58.694 41.667 0.00 0.00 41.22 3.82
5129 5263 5.560722 TCACCAGAGAGGAAATAAACACA 57.439 39.130 0.00 0.00 41.22 3.72
5130 5264 6.655003 TCAATCACCAGAGAGGAAATAAACAC 59.345 38.462 0.00 0.00 41.22 3.32
5131 5265 6.778821 TCAATCACCAGAGAGGAAATAAACA 58.221 36.000 0.00 0.00 41.22 2.83
5132 5266 7.554118 TCATCAATCACCAGAGAGGAAATAAAC 59.446 37.037 0.00 0.00 41.22 2.01
5133 5267 7.632861 TCATCAATCACCAGAGAGGAAATAAA 58.367 34.615 0.00 0.00 41.22 1.40
5134 5268 7.199167 TCATCAATCACCAGAGAGGAAATAA 57.801 36.000 0.00 0.00 41.22 1.40
5135 5269 6.813293 TCATCAATCACCAGAGAGGAAATA 57.187 37.500 0.00 0.00 41.22 1.40
5136 5270 5.705397 TCATCAATCACCAGAGAGGAAAT 57.295 39.130 0.00 0.00 41.22 2.17
5137 5271 5.221904 TGTTCATCAATCACCAGAGAGGAAA 60.222 40.000 0.00 0.00 41.22 3.13
5138 5272 4.286808 TGTTCATCAATCACCAGAGAGGAA 59.713 41.667 0.00 0.00 41.22 3.36
5139 5273 3.840078 TGTTCATCAATCACCAGAGAGGA 59.160 43.478 0.00 0.00 41.22 3.71
5140 5274 4.081254 TCTGTTCATCAATCACCAGAGAGG 60.081 45.833 0.00 0.00 45.67 3.69
5141 5275 5.082251 TCTGTTCATCAATCACCAGAGAG 57.918 43.478 0.00 0.00 0.00 3.20
5142 5276 5.488262 TTCTGTTCATCAATCACCAGAGA 57.512 39.130 0.00 0.00 31.28 3.10
5143 5277 5.471116 TGTTTCTGTTCATCAATCACCAGAG 59.529 40.000 0.00 0.00 31.28 3.35
5144 5278 5.375773 TGTTTCTGTTCATCAATCACCAGA 58.624 37.500 0.00 0.00 0.00 3.86
5145 5279 5.240183 ACTGTTTCTGTTCATCAATCACCAG 59.760 40.000 0.00 0.00 0.00 4.00
5146 5280 5.132502 ACTGTTTCTGTTCATCAATCACCA 58.867 37.500 0.00 0.00 0.00 4.17
5147 5281 5.239306 TGACTGTTTCTGTTCATCAATCACC 59.761 40.000 0.00 0.00 0.00 4.02
5148 5282 6.203530 TCTGACTGTTTCTGTTCATCAATCAC 59.796 38.462 0.00 0.00 0.00 3.06
5149 5283 6.290605 TCTGACTGTTTCTGTTCATCAATCA 58.709 36.000 0.00 0.00 0.00 2.57
5150 5284 6.791887 TCTGACTGTTTCTGTTCATCAATC 57.208 37.500 0.00 0.00 0.00 2.67
5151 5285 8.725148 GTTATCTGACTGTTTCTGTTCATCAAT 58.275 33.333 0.00 0.00 0.00 2.57
5152 5286 7.933577 AGTTATCTGACTGTTTCTGTTCATCAA 59.066 33.333 0.00 0.00 0.00 2.57
5153 5287 7.445121 AGTTATCTGACTGTTTCTGTTCATCA 58.555 34.615 0.00 0.00 0.00 3.07
5154 5288 7.897575 AGTTATCTGACTGTTTCTGTTCATC 57.102 36.000 0.00 0.00 0.00 2.92
5155 5289 7.547370 GCTAGTTATCTGACTGTTTCTGTTCAT 59.453 37.037 0.00 0.00 0.00 2.57
5156 5290 6.868864 GCTAGTTATCTGACTGTTTCTGTTCA 59.131 38.462 0.00 0.00 0.00 3.18
5157 5291 6.868864 TGCTAGTTATCTGACTGTTTCTGTTC 59.131 38.462 0.00 0.00 0.00 3.18
5158 5292 6.759272 TGCTAGTTATCTGACTGTTTCTGTT 58.241 36.000 0.00 0.00 0.00 3.16
5159 5293 6.346477 TGCTAGTTATCTGACTGTTTCTGT 57.654 37.500 0.00 0.00 0.00 3.41
5160 5294 5.290643 GCTGCTAGTTATCTGACTGTTTCTG 59.709 44.000 0.00 0.00 0.00 3.02
5161 5295 5.415221 GCTGCTAGTTATCTGACTGTTTCT 58.585 41.667 0.00 0.00 0.00 2.52
5162 5296 4.568760 GGCTGCTAGTTATCTGACTGTTTC 59.431 45.833 0.00 0.00 0.00 2.78
5163 5297 4.223923 AGGCTGCTAGTTATCTGACTGTTT 59.776 41.667 0.00 0.00 0.00 2.83
5164 5298 3.772025 AGGCTGCTAGTTATCTGACTGTT 59.228 43.478 0.00 0.00 0.00 3.16
5165 5299 3.370104 AGGCTGCTAGTTATCTGACTGT 58.630 45.455 0.00 0.00 0.00 3.55
5166 5300 5.521906 TTAGGCTGCTAGTTATCTGACTG 57.478 43.478 0.00 0.00 0.00 3.51
5167 5301 5.422331 TGTTTAGGCTGCTAGTTATCTGACT 59.578 40.000 0.00 0.00 0.00 3.41
5168 5302 5.661458 TGTTTAGGCTGCTAGTTATCTGAC 58.339 41.667 0.00 0.00 0.00 3.51
5169 5303 5.932619 TGTTTAGGCTGCTAGTTATCTGA 57.067 39.130 0.00 0.00 0.00 3.27
5170 5304 7.559590 AATTGTTTAGGCTGCTAGTTATCTG 57.440 36.000 0.00 0.00 0.00 2.90
5171 5305 8.581253 AAAATTGTTTAGGCTGCTAGTTATCT 57.419 30.769 0.00 0.00 0.00 1.98
5194 5328 7.685481 AGGAAAAGAAAAGGAACAAGGAAAAA 58.315 30.769 0.00 0.00 0.00 1.94
5195 5329 7.252612 AGGAAAAGAAAAGGAACAAGGAAAA 57.747 32.000 0.00 0.00 0.00 2.29
5196 5330 6.867519 AGGAAAAGAAAAGGAACAAGGAAA 57.132 33.333 0.00 0.00 0.00 3.13
5197 5331 6.351796 CCAAGGAAAAGAAAAGGAACAAGGAA 60.352 38.462 0.00 0.00 0.00 3.36
5198 5332 5.128663 CCAAGGAAAAGAAAAGGAACAAGGA 59.871 40.000 0.00 0.00 0.00 3.36
5199 5333 5.104941 ACCAAGGAAAAGAAAAGGAACAAGG 60.105 40.000 0.00 0.00 0.00 3.61
5200 5334 5.977635 ACCAAGGAAAAGAAAAGGAACAAG 58.022 37.500 0.00 0.00 0.00 3.16
5201 5335 6.367374 AACCAAGGAAAAGAAAAGGAACAA 57.633 33.333 0.00 0.00 0.00 2.83
5202 5336 6.367374 AAACCAAGGAAAAGAAAAGGAACA 57.633 33.333 0.00 0.00 0.00 3.18
5203 5337 8.958119 ATAAAACCAAGGAAAAGAAAAGGAAC 57.042 30.769 0.00 0.00 0.00 3.62
5204 5338 9.967451 AAATAAAACCAAGGAAAAGAAAAGGAA 57.033 25.926 0.00 0.00 0.00 3.36
5205 5339 9.967451 AAAATAAAACCAAGGAAAAGAAAAGGA 57.033 25.926 0.00 0.00 0.00 3.36
5209 5343 8.884726 CGGAAAAATAAAACCAAGGAAAAGAAA 58.115 29.630 0.00 0.00 0.00 2.52
5210 5344 7.011576 GCGGAAAAATAAAACCAAGGAAAAGAA 59.988 33.333 0.00 0.00 0.00 2.52
5211 5345 6.480651 GCGGAAAAATAAAACCAAGGAAAAGA 59.519 34.615 0.00 0.00 0.00 2.52
5212 5346 6.481976 AGCGGAAAAATAAAACCAAGGAAAAG 59.518 34.615 0.00 0.00 0.00 2.27
5213 5347 6.350103 AGCGGAAAAATAAAACCAAGGAAAA 58.650 32.000 0.00 0.00 0.00 2.29
5214 5348 5.919755 AGCGGAAAAATAAAACCAAGGAAA 58.080 33.333 0.00 0.00 0.00 3.13
5215 5349 5.303333 AGAGCGGAAAAATAAAACCAAGGAA 59.697 36.000 0.00 0.00 0.00 3.36
5216 5350 4.830600 AGAGCGGAAAAATAAAACCAAGGA 59.169 37.500 0.00 0.00 0.00 3.36
5217 5351 5.134202 AGAGCGGAAAAATAAAACCAAGG 57.866 39.130 0.00 0.00 0.00 3.61
5218 5352 7.477144 AAAAGAGCGGAAAAATAAAACCAAG 57.523 32.000 0.00 0.00 0.00 3.61
5219 5353 7.851387 AAAAAGAGCGGAAAAATAAAACCAA 57.149 28.000 0.00 0.00 0.00 3.67
5241 5375 3.997021 TGAAAGCAAAACAAGCGGAAAAA 59.003 34.783 0.00 0.00 37.01 1.94
5242 5376 3.589988 TGAAAGCAAAACAAGCGGAAAA 58.410 36.364 0.00 0.00 37.01 2.29
5243 5377 3.238108 TGAAAGCAAAACAAGCGGAAA 57.762 38.095 0.00 0.00 37.01 3.13
5244 5378 2.949451 TGAAAGCAAAACAAGCGGAA 57.051 40.000 0.00 0.00 37.01 4.30
5245 5379 3.451141 AATGAAAGCAAAACAAGCGGA 57.549 38.095 0.00 0.00 37.01 5.54
5246 5380 3.059665 GGAAATGAAAGCAAAACAAGCGG 60.060 43.478 0.00 0.00 37.01 5.52
5247 5381 3.803778 AGGAAATGAAAGCAAAACAAGCG 59.196 39.130 0.00 0.00 37.01 4.68
5248 5382 5.406477 CCTAGGAAATGAAAGCAAAACAAGC 59.594 40.000 1.05 0.00 0.00 4.01
5249 5383 6.421801 CACCTAGGAAATGAAAGCAAAACAAG 59.578 38.462 17.98 0.00 0.00 3.16
5250 5384 6.097554 TCACCTAGGAAATGAAAGCAAAACAA 59.902 34.615 17.98 0.00 0.00 2.83
5251 5385 5.596361 TCACCTAGGAAATGAAAGCAAAACA 59.404 36.000 17.98 0.00 0.00 2.83
5252 5386 6.016276 TCTCACCTAGGAAATGAAAGCAAAAC 60.016 38.462 17.98 0.00 0.00 2.43
5253 5387 6.068010 TCTCACCTAGGAAATGAAAGCAAAA 58.932 36.000 17.98 0.00 0.00 2.44
5254 5388 5.630121 TCTCACCTAGGAAATGAAAGCAAA 58.370 37.500 17.98 0.00 0.00 3.68
5255 5389 5.241403 TCTCACCTAGGAAATGAAAGCAA 57.759 39.130 17.98 0.00 0.00 3.91
5256 5390 4.908601 TCTCACCTAGGAAATGAAAGCA 57.091 40.909 17.98 0.00 0.00 3.91
5257 5391 6.575162 TTTTCTCACCTAGGAAATGAAAGC 57.425 37.500 17.98 0.00 32.54 3.51
5259 5393 9.753674 ACATATTTTCTCACCTAGGAAATGAAA 57.246 29.630 17.98 15.85 42.43 2.69
5260 5394 9.177608 CACATATTTTCTCACCTAGGAAATGAA 57.822 33.333 17.98 10.96 42.43 2.57
5261 5395 8.548025 TCACATATTTTCTCACCTAGGAAATGA 58.452 33.333 17.98 8.16 42.43 2.57
5262 5396 8.737168 TCACATATTTTCTCACCTAGGAAATG 57.263 34.615 17.98 3.25 42.43 2.32
5263 5397 9.178758 GTTCACATATTTTCTCACCTAGGAAAT 57.821 33.333 17.98 12.74 44.30 2.17
5264 5398 8.160765 TGTTCACATATTTTCTCACCTAGGAAA 58.839 33.333 17.98 5.33 37.09 3.13
5265 5399 7.606456 GTGTTCACATATTTTCTCACCTAGGAA 59.394 37.037 17.98 1.72 0.00 3.36
5266 5400 7.103641 GTGTTCACATATTTTCTCACCTAGGA 58.896 38.462 17.98 0.00 0.00 2.94
5267 5401 6.316390 GGTGTTCACATATTTTCTCACCTAGG 59.684 42.308 7.41 7.41 40.30 3.02
5268 5402 7.308782 GGTGTTCACATATTTTCTCACCTAG 57.691 40.000 5.32 0.00 40.30 3.02
5270 5404 5.880901 AGGTGTTCACATATTTTCTCACCT 58.119 37.500 7.56 7.56 46.04 4.00
5271 5405 6.575162 AAGGTGTTCACATATTTTCTCACC 57.425 37.500 5.32 0.00 42.72 4.02
5272 5406 8.871686 AAAAAGGTGTTCACATATTTTCTCAC 57.128 30.769 5.32 0.00 30.91 3.51
5273 5407 8.690884 TGAAAAAGGTGTTCACATATTTTCTCA 58.309 29.630 23.35 17.94 36.55 3.27
5274 5408 9.528018 TTGAAAAAGGTGTTCACATATTTTCTC 57.472 29.630 23.35 16.72 36.55 2.87
5275 5409 9.883142 TTTGAAAAAGGTGTTCACATATTTTCT 57.117 25.926 23.35 12.39 36.55 2.52
5278 5412 8.599774 CGTTTTGAAAAAGGTGTTCACATATTT 58.400 29.630 5.32 2.87 34.78 1.40
5279 5413 7.223777 CCGTTTTGAAAAAGGTGTTCACATATT 59.776 33.333 13.42 0.00 34.78 1.28
5280 5414 6.699642 CCGTTTTGAAAAAGGTGTTCACATAT 59.300 34.615 13.42 0.00 34.78 1.78
5281 5415 6.037098 CCGTTTTGAAAAAGGTGTTCACATA 58.963 36.000 13.42 0.00 34.78 2.29
5282 5416 4.867608 CCGTTTTGAAAAAGGTGTTCACAT 59.132 37.500 13.42 0.00 34.78 3.21
5283 5417 4.238514 CCGTTTTGAAAAAGGTGTTCACA 58.761 39.130 13.42 0.00 34.78 3.58
5284 5418 3.615056 CCCGTTTTGAAAAAGGTGTTCAC 59.385 43.478 18.73 0.00 34.78 3.18
5285 5419 3.510360 TCCCGTTTTGAAAAAGGTGTTCA 59.490 39.130 18.73 0.00 33.28 3.18
5286 5420 3.861113 GTCCCGTTTTGAAAAAGGTGTTC 59.139 43.478 18.73 5.31 33.28 3.18
5287 5421 3.512329 AGTCCCGTTTTGAAAAAGGTGTT 59.488 39.130 18.73 3.76 33.28 3.32
5288 5422 3.093814 AGTCCCGTTTTGAAAAAGGTGT 58.906 40.909 18.73 3.12 33.28 4.16
5289 5423 3.793797 AGTCCCGTTTTGAAAAAGGTG 57.206 42.857 18.73 11.62 33.28 4.00
5290 5424 5.394443 GGTTAAGTCCCGTTTTGAAAAAGGT 60.394 40.000 18.73 5.53 33.28 3.50
5291 5425 5.045215 GGTTAAGTCCCGTTTTGAAAAAGG 58.955 41.667 14.48 14.48 34.51 3.11
5292 5426 5.652518 TGGTTAAGTCCCGTTTTGAAAAAG 58.347 37.500 0.00 0.00 0.00 2.27
5293 5427 5.656213 TGGTTAAGTCCCGTTTTGAAAAA 57.344 34.783 0.00 0.00 0.00 1.94
5294 5428 5.185442 ACTTGGTTAAGTCCCGTTTTGAAAA 59.815 36.000 0.00 0.00 43.53 2.29
5295 5429 4.705991 ACTTGGTTAAGTCCCGTTTTGAAA 59.294 37.500 0.00 0.00 43.53 2.69
5296 5430 4.271661 ACTTGGTTAAGTCCCGTTTTGAA 58.728 39.130 0.00 0.00 43.53 2.69
5297 5431 3.888583 ACTTGGTTAAGTCCCGTTTTGA 58.111 40.909 0.00 0.00 43.53 2.69
5308 5442 4.872691 AGCATCGATTGAGACTTGGTTAAG 59.127 41.667 0.00 0.00 39.86 1.85
5309 5443 4.832248 AGCATCGATTGAGACTTGGTTAA 58.168 39.130 0.00 0.00 0.00 2.01
5310 5444 4.471904 AGCATCGATTGAGACTTGGTTA 57.528 40.909 0.00 0.00 0.00 2.85
5311 5445 3.340814 AGCATCGATTGAGACTTGGTT 57.659 42.857 0.00 0.00 0.00 3.67
5312 5446 4.679373 ATAGCATCGATTGAGACTTGGT 57.321 40.909 0.00 0.00 0.00 3.67
5313 5447 6.034363 CGAATATAGCATCGATTGAGACTTGG 59.966 42.308 0.00 0.00 41.43 3.61
5314 5448 6.584184 ACGAATATAGCATCGATTGAGACTTG 59.416 38.462 11.05 0.00 41.43 3.16
5315 5449 6.682746 ACGAATATAGCATCGATTGAGACTT 58.317 36.000 11.05 0.00 41.43 3.01
5316 5450 6.260870 ACGAATATAGCATCGATTGAGACT 57.739 37.500 11.05 0.00 41.43 3.24
5317 5451 7.465173 TCTACGAATATAGCATCGATTGAGAC 58.535 38.462 11.05 0.00 41.43 3.36
5318 5452 7.611213 TCTACGAATATAGCATCGATTGAGA 57.389 36.000 11.05 6.32 41.43 3.27
5319 5453 8.848948 ATTCTACGAATATAGCATCGATTGAG 57.151 34.615 11.05 0.00 41.43 3.02
5320 5454 9.639601 AAATTCTACGAATATAGCATCGATTGA 57.360 29.630 11.05 0.00 41.43 2.57
5324 5458 9.058424 CGTAAAATTCTACGAATATAGCATCGA 57.942 33.333 5.38 0.00 46.00 3.59
5325 5459 8.847567 ACGTAAAATTCTACGAATATAGCATCG 58.152 33.333 17.76 4.40 46.00 3.84
5328 5462 9.518906 TCAACGTAAAATTCTACGAATATAGCA 57.481 29.630 17.76 0.00 46.00 3.49
5329 5463 9.990888 CTCAACGTAAAATTCTACGAATATAGC 57.009 33.333 17.76 0.00 46.00 2.97
5333 5467 9.241317 GGATCTCAACGTAAAATTCTACGAATA 57.759 33.333 17.76 2.01 46.00 1.75
5334 5468 7.043590 CGGATCTCAACGTAAAATTCTACGAAT 60.044 37.037 17.76 3.77 46.00 3.34
5335 5469 6.252015 CGGATCTCAACGTAAAATTCTACGAA 59.748 38.462 17.76 2.68 46.00 3.85
5336 5470 5.740569 CGGATCTCAACGTAAAATTCTACGA 59.259 40.000 17.76 0.00 46.00 3.43
5338 5472 6.693342 CACGGATCTCAACGTAAAATTCTAC 58.307 40.000 0.00 0.00 42.04 2.59
5339 5473 5.290158 GCACGGATCTCAACGTAAAATTCTA 59.710 40.000 0.00 0.00 42.04 2.10
5340 5474 4.092968 GCACGGATCTCAACGTAAAATTCT 59.907 41.667 0.00 0.00 42.04 2.40
5341 5475 4.142988 TGCACGGATCTCAACGTAAAATTC 60.143 41.667 0.00 0.00 42.04 2.17
5342 5476 3.749088 TGCACGGATCTCAACGTAAAATT 59.251 39.130 0.00 0.00 42.04 1.82
5343 5477 3.331150 TGCACGGATCTCAACGTAAAAT 58.669 40.909 0.00 0.00 42.04 1.82
5344 5478 2.756829 TGCACGGATCTCAACGTAAAA 58.243 42.857 0.00 0.00 42.04 1.52
5345 5479 2.442212 TGCACGGATCTCAACGTAAA 57.558 45.000 0.00 0.00 42.04 2.01
5346 5480 2.442212 TTGCACGGATCTCAACGTAA 57.558 45.000 0.00 0.00 42.04 3.18
5347 5481 2.442212 TTTGCACGGATCTCAACGTA 57.558 45.000 0.00 0.00 42.04 3.57
5348 5482 1.588674 TTTTGCACGGATCTCAACGT 58.411 45.000 0.00 0.00 45.25 3.99
5349 5483 2.900122 ATTTTGCACGGATCTCAACG 57.100 45.000 0.00 0.00 0.00 4.10
5350 5484 5.222631 AGAAAATTTTGCACGGATCTCAAC 58.777 37.500 8.47 0.00 0.00 3.18
5351 5485 5.452078 AGAAAATTTTGCACGGATCTCAA 57.548 34.783 8.47 0.00 0.00 3.02
5352 5486 5.452078 AAGAAAATTTTGCACGGATCTCA 57.548 34.783 8.47 0.00 0.00 3.27
5353 5487 6.642540 AGAAAAGAAAATTTTGCACGGATCTC 59.357 34.615 8.47 0.00 0.00 2.75
5354 5488 6.515832 AGAAAAGAAAATTTTGCACGGATCT 58.484 32.000 8.47 0.52 0.00 2.75
5355 5489 6.769608 AGAAAAGAAAATTTTGCACGGATC 57.230 33.333 8.47 0.00 0.00 3.36
5356 5490 7.552458 AAAGAAAAGAAAATTTTGCACGGAT 57.448 28.000 8.47 0.00 0.00 4.18
5357 5491 6.976636 AAAGAAAAGAAAATTTTGCACGGA 57.023 29.167 8.47 0.00 0.00 4.69
5358 5492 7.962373 AGAAAAAGAAAAGAAAATTTTGCACGG 59.038 29.630 8.47 0.00 0.00 4.94
5359 5493 8.879260 AGAAAAAGAAAAGAAAATTTTGCACG 57.121 26.923 8.47 0.00 0.00 5.34
5423 5557 5.163642 TGCTTAGGTCTTAGTCGATTGAGAC 60.164 44.000 20.35 20.35 41.23 3.36
5424 5558 4.948004 TGCTTAGGTCTTAGTCGATTGAGA 59.052 41.667 0.00 0.00 0.00 3.27
5425 5559 5.038033 GTGCTTAGGTCTTAGTCGATTGAG 58.962 45.833 0.00 0.00 0.00 3.02
5426 5560 4.461431 TGTGCTTAGGTCTTAGTCGATTGA 59.539 41.667 0.00 0.00 0.00 2.57
5427 5561 4.563184 GTGTGCTTAGGTCTTAGTCGATTG 59.437 45.833 0.00 0.00 0.00 2.67
5428 5562 4.381718 GGTGTGCTTAGGTCTTAGTCGATT 60.382 45.833 0.00 0.00 0.00 3.34
5429 5563 3.130693 GGTGTGCTTAGGTCTTAGTCGAT 59.869 47.826 0.00 0.00 0.00 3.59
5430 5564 2.490903 GGTGTGCTTAGGTCTTAGTCGA 59.509 50.000 0.00 0.00 0.00 4.20
5431 5565 2.492484 AGGTGTGCTTAGGTCTTAGTCG 59.508 50.000 0.00 0.00 0.00 4.18
5432 5566 5.855740 ATAGGTGTGCTTAGGTCTTAGTC 57.144 43.478 0.00 0.00 0.00 2.59
5433 5567 6.212791 TGAAATAGGTGTGCTTAGGTCTTAGT 59.787 38.462 0.00 0.00 0.00 2.24
5434 5568 6.640518 TGAAATAGGTGTGCTTAGGTCTTAG 58.359 40.000 0.00 0.00 0.00 2.18
5435 5569 6.614694 TGAAATAGGTGTGCTTAGGTCTTA 57.385 37.500 0.00 0.00 0.00 2.10
5436 5570 5.499004 TGAAATAGGTGTGCTTAGGTCTT 57.501 39.130 0.00 0.00 0.00 3.01
5437 5571 5.499004 TTGAAATAGGTGTGCTTAGGTCT 57.501 39.130 0.00 0.00 0.00 3.85
5438 5572 6.569179 TTTTGAAATAGGTGTGCTTAGGTC 57.431 37.500 0.00 0.00 0.00 3.85
5439 5573 6.719370 TGATTTTGAAATAGGTGTGCTTAGGT 59.281 34.615 0.00 0.00 0.00 3.08
5440 5574 7.029563 GTGATTTTGAAATAGGTGTGCTTAGG 58.970 38.462 0.00 0.00 0.00 2.69
5441 5575 7.592938 TGTGATTTTGAAATAGGTGTGCTTAG 58.407 34.615 0.00 0.00 0.00 2.18
5442 5576 7.517614 TGTGATTTTGAAATAGGTGTGCTTA 57.482 32.000 0.00 0.00 0.00 3.09
5443 5577 6.403866 TGTGATTTTGAAATAGGTGTGCTT 57.596 33.333 0.00 0.00 0.00 3.91
5444 5578 6.209192 TCATGTGATTTTGAAATAGGTGTGCT 59.791 34.615 0.00 0.00 0.00 4.40
5445 5579 6.389091 TCATGTGATTTTGAAATAGGTGTGC 58.611 36.000 0.00 0.00 0.00 4.57
5446 5580 7.596494 ACTCATGTGATTTTGAAATAGGTGTG 58.404 34.615 0.94 0.00 0.00 3.82
5447 5581 7.765695 ACTCATGTGATTTTGAAATAGGTGT 57.234 32.000 0.94 0.00 0.00 4.16
5475 5609 9.921637 GAATGGTTGTTTCCATATGTTAGAAAA 57.078 29.630 1.24 0.00 46.14 2.29
5476 5610 9.308000 AGAATGGTTGTTTCCATATGTTAGAAA 57.692 29.630 1.24 2.03 46.14 2.52
5477 5611 8.877864 AGAATGGTTGTTTCCATATGTTAGAA 57.122 30.769 1.24 0.00 46.14 2.10
5478 5612 8.877864 AAGAATGGTTGTTTCCATATGTTAGA 57.122 30.769 1.24 0.00 46.14 2.10
5487 5621 9.541143 GAAAAGAAATAAGAATGGTTGTTTCCA 57.459 29.630 6.12 0.00 37.93 3.53
5488 5622 9.541143 TGAAAAGAAATAAGAATGGTTGTTTCC 57.459 29.630 6.12 0.00 37.93 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.