Multiple sequence alignment - TraesCS5A01G486800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G486800 chr5A 100.000 3434 0 0 1 3434 657393567 657397000 0.000000e+00 6342.0
1 TraesCS5A01G486800 chr5A 81.170 547 97 5 207 749 653950497 653951041 5.260000e-118 435.0
2 TraesCS5A01G486800 chr5A 82.581 155 19 7 10 157 419331664 419331817 2.780000e-26 130.0
3 TraesCS5A01G486800 chr5D 93.682 1662 89 7 882 2541 529256577 529258224 0.000000e+00 2473.0
4 TraesCS5A01G486800 chr5D 83.849 582 40 23 2642 3209 529258368 529258909 3.960000e-139 505.0
5 TraesCS5A01G486800 chr5B 93.076 1661 100 8 886 2541 667838326 667839976 0.000000e+00 2416.0
6 TraesCS5A01G486800 chr5B 92.500 440 32 1 1909 2347 704279822 704279383 2.250000e-176 628.0
7 TraesCS5A01G486800 chr5B 83.701 589 44 29 2640 3204 667840083 667840643 3.060000e-140 508.0
8 TraesCS5A01G486800 chr4B 91.591 440 36 1 1909 2347 175550415 175549976 1.050000e-169 606.0
9 TraesCS5A01G486800 chr4B 90.703 441 27 2 1908 2347 564199368 564198941 2.970000e-160 575.0
10 TraesCS5A01G486800 chr4B 83.333 594 88 9 207 794 135206379 135206967 3.900000e-149 538.0
11 TraesCS5A01G486800 chr4B 79.895 572 105 5 224 794 489433065 489433627 8.870000e-111 411.0
12 TraesCS5A01G486800 chr4B 81.988 161 25 2 1 157 655577383 655577543 2.150000e-27 134.0
13 TraesCS5A01G486800 chr3D 84.505 626 79 12 218 836 305660653 305660039 1.360000e-168 603.0
14 TraesCS5A01G486800 chr3D 84.337 581 86 4 219 798 281911244 281911820 6.430000e-157 564.0
15 TraesCS5A01G486800 chr1A 92.363 419 32 0 1920 2338 483640259 483640677 6.340000e-167 597.0
16 TraesCS5A01G486800 chr2A 85.154 586 77 5 219 794 306178767 306178182 2.950000e-165 592.0
17 TraesCS5A01G486800 chr1B 92.500 400 27 2 1909 2307 169942895 169942498 1.380000e-158 569.0
18 TraesCS5A01G486800 chr1B 83.074 579 96 2 217 794 335969172 335968595 3.040000e-145 525.0
19 TraesCS5A01G486800 chr1B 80.789 583 103 5 214 794 339691882 339692457 6.760000e-122 448.0
20 TraesCS5A01G486800 chr1B 91.558 154 12 1 2195 2347 169942491 169942338 9.660000e-51 211.0
21 TraesCS5A01G486800 chr6B 81.646 632 91 19 217 839 551771199 551770584 5.120000e-138 501.0
22 TraesCS5A01G486800 chr6B 76.009 446 94 11 1020 1458 56007532 56007093 5.770000e-53 219.0
23 TraesCS5A01G486800 chr6B 91.176 68 6 0 1867 1934 720705119 720705186 3.650000e-15 93.5
24 TraesCS5A01G486800 chr1D 80.944 593 102 7 206 794 234522760 234522175 3.120000e-125 459.0
25 TraesCS5A01G486800 chrUn 82.621 351 60 1 1545 1894 215036079 215036429 3.330000e-80 309.0
26 TraesCS5A01G486800 chrUn 76.957 447 88 12 1020 1458 103930990 103930551 1.230000e-59 241.0
27 TraesCS5A01G486800 chr7A 83.654 312 50 1 1545 1855 730910881 730910570 3.350000e-75 292.0
28 TraesCS5A01G486800 chr6A 77.108 415 84 8 1031 1438 31364740 31364330 2.670000e-56 230.0
29 TraesCS5A01G486800 chr6A 82.022 89 14 1 2556 2642 21946163 21946075 1.320000e-09 75.0
30 TraesCS5A01G486800 chr2B 85.915 142 16 2 20 157 152467959 152467818 7.680000e-32 148.0
31 TraesCS5A01G486800 chr7D 84.314 153 20 3 9 157 574703208 574703056 2.760000e-31 147.0
32 TraesCS5A01G486800 chr7D 85.211 142 16 3 20 157 97627054 97626914 1.280000e-29 141.0
33 TraesCS5A01G486800 chr7B 84.416 154 18 6 9 157 52659909 52659757 2.760000e-31 147.0
34 TraesCS5A01G486800 chr7B 84.416 154 18 6 9 157 52681291 52681139 2.760000e-31 147.0
35 TraesCS5A01G486800 chr7B 83.007 153 22 3 9 157 625152260 625152108 5.980000e-28 135.0
36 TraesCS5A01G486800 chr4D 83.019 159 21 6 3 157 43675711 43675555 4.620000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G486800 chr5A 657393567 657397000 3433 False 6342 6342 100.0000 1 3434 1 chr5A.!!$F3 3433
1 TraesCS5A01G486800 chr5A 653950497 653951041 544 False 435 435 81.1700 207 749 1 chr5A.!!$F2 542
2 TraesCS5A01G486800 chr5D 529256577 529258909 2332 False 1489 2473 88.7655 882 3209 2 chr5D.!!$F1 2327
3 TraesCS5A01G486800 chr5B 667838326 667840643 2317 False 1462 2416 88.3885 886 3204 2 chr5B.!!$F1 2318
4 TraesCS5A01G486800 chr4B 135206379 135206967 588 False 538 538 83.3330 207 794 1 chr4B.!!$F1 587
5 TraesCS5A01G486800 chr4B 489433065 489433627 562 False 411 411 79.8950 224 794 1 chr4B.!!$F2 570
6 TraesCS5A01G486800 chr3D 305660039 305660653 614 True 603 603 84.5050 218 836 1 chr3D.!!$R1 618
7 TraesCS5A01G486800 chr3D 281911244 281911820 576 False 564 564 84.3370 219 798 1 chr3D.!!$F1 579
8 TraesCS5A01G486800 chr2A 306178182 306178767 585 True 592 592 85.1540 219 794 1 chr2A.!!$R1 575
9 TraesCS5A01G486800 chr1B 335968595 335969172 577 True 525 525 83.0740 217 794 1 chr1B.!!$R1 577
10 TraesCS5A01G486800 chr1B 339691882 339692457 575 False 448 448 80.7890 214 794 1 chr1B.!!$F1 580
11 TraesCS5A01G486800 chr1B 169942338 169942895 557 True 390 569 92.0290 1909 2347 2 chr1B.!!$R2 438
12 TraesCS5A01G486800 chr6B 551770584 551771199 615 True 501 501 81.6460 217 839 1 chr6B.!!$R2 622
13 TraesCS5A01G486800 chr1D 234522175 234522760 585 True 459 459 80.9440 206 794 1 chr1D.!!$R1 588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
35 36 0.036577 CTGCTTCTGACCACCCTGAG 60.037 60.0 0.00 0.0 0.00 3.35 F
109 110 0.107456 ATTCATGCCGCTGTAGAGGG 59.893 55.0 3.84 0.0 35.40 4.30 F
158 159 0.108615 CGGATGCGACCTCTCACTTT 60.109 55.0 0.00 0.0 0.00 2.66 F
842 876 0.326595 TTGGAGATGCCCTAACGCAA 59.673 50.0 0.00 0.0 43.24 4.85 F
843 877 0.392461 TGGAGATGCCCTAACGCAAC 60.392 55.0 0.00 0.0 43.24 4.17 F
1695 1731 0.616891 AAGCGTCCTCCGGGTTAATT 59.383 50.0 0.00 0.0 36.94 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1449 1485 0.105453 TGATGAGGAGAGGGTAGGCC 60.105 60.000 0.00 0.00 0.0 5.19 R
1543 1579 0.179059 TCCGACTCTGCAAGCAAACA 60.179 50.000 0.00 0.00 0.0 2.83 R
1549 1585 1.447489 CCAGCTCCGACTCTGCAAG 60.447 63.158 0.00 0.00 0.0 4.01 R
1695 1731 1.545614 GCGCGTCGAAAGTGTTGAGA 61.546 55.000 8.43 0.00 0.0 3.27 R
1896 1932 2.202743 GACATGCACGCGAGGCTA 60.203 61.111 15.93 7.56 0.0 3.93 R
3278 3517 0.106149 AAAACCCTGAAGAGCGTCGT 59.894 50.000 0.00 0.00 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.314331 CAGACCACTCCCACGCCT 61.314 66.667 0.00 0.00 0.00 5.52
18 19 3.314331 AGACCACTCCCACGCCTG 61.314 66.667 0.00 0.00 0.00 4.85
21 22 4.335647 CCACTCCCACGCCTGCTT 62.336 66.667 0.00 0.00 0.00 3.91
22 23 2.743928 CACTCCCACGCCTGCTTC 60.744 66.667 0.00 0.00 0.00 3.86
23 24 2.925170 ACTCCCACGCCTGCTTCT 60.925 61.111 0.00 0.00 0.00 2.85
24 25 2.435586 CTCCCACGCCTGCTTCTG 60.436 66.667 0.00 0.00 0.00 3.02
25 26 2.922503 TCCCACGCCTGCTTCTGA 60.923 61.111 0.00 0.00 0.00 3.27
26 27 2.743928 CCCACGCCTGCTTCTGAC 60.744 66.667 0.00 0.00 0.00 3.51
27 28 2.743928 CCACGCCTGCTTCTGACC 60.744 66.667 0.00 0.00 0.00 4.02
28 29 2.031012 CACGCCTGCTTCTGACCA 59.969 61.111 0.00 0.00 0.00 4.02
29 30 2.031163 ACGCCTGCTTCTGACCAC 59.969 61.111 0.00 0.00 0.00 4.16
30 31 2.743928 CGCCTGCTTCTGACCACC 60.744 66.667 0.00 0.00 0.00 4.61
31 32 2.360475 GCCTGCTTCTGACCACCC 60.360 66.667 0.00 0.00 0.00 4.61
32 33 2.900106 GCCTGCTTCTGACCACCCT 61.900 63.158 0.00 0.00 0.00 4.34
33 34 1.002868 CCTGCTTCTGACCACCCTG 60.003 63.158 0.00 0.00 0.00 4.45
34 35 1.483595 CCTGCTTCTGACCACCCTGA 61.484 60.000 0.00 0.00 0.00 3.86
35 36 0.036577 CTGCTTCTGACCACCCTGAG 60.037 60.000 0.00 0.00 0.00 3.35
36 37 1.376553 GCTTCTGACCACCCTGAGC 60.377 63.158 0.00 0.00 0.00 4.26
37 38 1.298014 CTTCTGACCACCCTGAGCC 59.702 63.158 0.00 0.00 0.00 4.70
38 39 1.461268 TTCTGACCACCCTGAGCCA 60.461 57.895 0.00 0.00 0.00 4.75
39 40 1.768684 TTCTGACCACCCTGAGCCAC 61.769 60.000 0.00 0.00 0.00 5.01
40 41 3.249189 TGACCACCCTGAGCCACC 61.249 66.667 0.00 0.00 0.00 4.61
41 42 4.035102 GACCACCCTGAGCCACCC 62.035 72.222 0.00 0.00 0.00 4.61
42 43 4.918360 ACCACCCTGAGCCACCCA 62.918 66.667 0.00 0.00 0.00 4.51
43 44 3.579302 CCACCCTGAGCCACCCAA 61.579 66.667 0.00 0.00 0.00 4.12
44 45 2.520458 CACCCTGAGCCACCCAAA 59.480 61.111 0.00 0.00 0.00 3.28
45 46 1.903404 CACCCTGAGCCACCCAAAC 60.903 63.158 0.00 0.00 0.00 2.93
46 47 2.283173 CCCTGAGCCACCCAAACC 60.283 66.667 0.00 0.00 0.00 3.27
47 48 2.283173 CCTGAGCCACCCAAACCC 60.283 66.667 0.00 0.00 0.00 4.11
48 49 2.283173 CTGAGCCACCCAAACCCC 60.283 66.667 0.00 0.00 0.00 4.95
49 50 2.780924 TGAGCCACCCAAACCCCT 60.781 61.111 0.00 0.00 0.00 4.79
50 51 2.035783 GAGCCACCCAAACCCCTC 59.964 66.667 0.00 0.00 0.00 4.30
51 52 3.585525 GAGCCACCCAAACCCCTCC 62.586 68.421 0.00 0.00 0.00 4.30
52 53 4.696805 GCCACCCAAACCCCTCCC 62.697 72.222 0.00 0.00 0.00 4.30
53 54 2.863988 CCACCCAAACCCCTCCCT 60.864 66.667 0.00 0.00 0.00 4.20
54 55 2.763902 CACCCAAACCCCTCCCTC 59.236 66.667 0.00 0.00 0.00 4.30
55 56 2.933834 ACCCAAACCCCTCCCTCG 60.934 66.667 0.00 0.00 0.00 4.63
56 57 4.426313 CCCAAACCCCTCCCTCGC 62.426 72.222 0.00 0.00 0.00 5.03
57 58 4.426313 CCAAACCCCTCCCTCGCC 62.426 72.222 0.00 0.00 0.00 5.54
58 59 4.426313 CAAACCCCTCCCTCGCCC 62.426 72.222 0.00 0.00 0.00 6.13
92 93 3.058160 GACGCAGCTGCCCACATT 61.058 61.111 32.07 10.03 37.91 2.71
93 94 3.044059 GACGCAGCTGCCCACATTC 62.044 63.158 32.07 14.82 37.91 2.67
94 95 3.057548 CGCAGCTGCCCACATTCA 61.058 61.111 32.07 0.00 37.91 2.57
95 96 2.412323 CGCAGCTGCCCACATTCAT 61.412 57.895 32.07 0.00 37.91 2.57
96 97 1.141019 GCAGCTGCCCACATTCATG 59.859 57.895 28.76 0.00 34.31 3.07
97 98 1.141019 CAGCTGCCCACATTCATGC 59.859 57.895 0.00 0.00 0.00 4.06
98 99 2.056223 AGCTGCCCACATTCATGCC 61.056 57.895 0.00 0.00 0.00 4.40
99 100 2.802792 CTGCCCACATTCATGCCG 59.197 61.111 0.00 0.00 0.00 5.69
100 101 3.420214 CTGCCCACATTCATGCCGC 62.420 63.158 0.00 0.00 0.00 6.53
101 102 3.142838 GCCCACATTCATGCCGCT 61.143 61.111 0.00 0.00 0.00 5.52
102 103 2.802792 CCCACATTCATGCCGCTG 59.197 61.111 0.00 0.00 0.00 5.18
103 104 2.048023 CCCACATTCATGCCGCTGT 61.048 57.895 0.00 0.00 0.00 4.40
104 105 0.747644 CCCACATTCATGCCGCTGTA 60.748 55.000 0.00 0.00 0.00 2.74
105 106 0.659427 CCACATTCATGCCGCTGTAG 59.341 55.000 0.00 0.00 0.00 2.74
106 107 1.655484 CACATTCATGCCGCTGTAGA 58.345 50.000 0.00 0.00 0.00 2.59
107 108 1.596260 CACATTCATGCCGCTGTAGAG 59.404 52.381 0.00 0.00 0.00 2.43
108 109 1.224075 CATTCATGCCGCTGTAGAGG 58.776 55.000 0.00 0.00 38.10 3.69
109 110 0.107456 ATTCATGCCGCTGTAGAGGG 59.893 55.000 3.84 0.00 35.40 4.30
116 117 3.775654 GCTGTAGAGGGCGCCACT 61.776 66.667 30.85 27.00 0.00 4.00
117 118 2.496817 CTGTAGAGGGCGCCACTC 59.503 66.667 30.85 28.97 35.20 3.51
118 119 3.075005 TGTAGAGGGCGCCACTCC 61.075 66.667 29.89 20.01 35.58 3.85
119 120 3.075005 GTAGAGGGCGCCACTCCA 61.075 66.667 29.89 20.24 35.58 3.86
120 121 3.075005 TAGAGGGCGCCACTCCAC 61.075 66.667 29.89 14.29 35.58 4.02
121 122 3.897681 TAGAGGGCGCCACTCCACA 62.898 63.158 29.89 18.45 35.58 4.17
122 123 4.101448 GAGGGCGCCACTCCACAT 62.101 66.667 30.85 2.30 0.00 3.21
123 124 3.628646 GAGGGCGCCACTCCACATT 62.629 63.158 30.85 0.81 0.00 2.71
124 125 3.443045 GGGCGCCACTCCACATTG 61.443 66.667 30.85 0.00 0.00 2.82
125 126 2.359850 GGCGCCACTCCACATTGA 60.360 61.111 24.80 0.00 0.00 2.57
126 127 1.971167 GGCGCCACTCCACATTGAA 60.971 57.895 24.80 0.00 0.00 2.69
127 128 1.503542 GCGCCACTCCACATTGAAG 59.496 57.895 0.00 0.00 0.00 3.02
128 129 0.955428 GCGCCACTCCACATTGAAGA 60.955 55.000 0.00 0.00 0.00 2.87
129 130 1.742761 CGCCACTCCACATTGAAGAT 58.257 50.000 0.00 0.00 0.00 2.40
130 131 1.399440 CGCCACTCCACATTGAAGATG 59.601 52.381 0.00 0.00 0.00 2.90
131 132 1.747355 GCCACTCCACATTGAAGATGG 59.253 52.381 0.00 0.00 34.58 3.51
132 133 1.747355 CCACTCCACATTGAAGATGGC 59.253 52.381 0.00 0.00 33.20 4.40
133 134 2.619849 CCACTCCACATTGAAGATGGCT 60.620 50.000 0.00 0.00 33.20 4.75
134 135 2.681848 CACTCCACATTGAAGATGGCTC 59.318 50.000 0.00 0.00 33.20 4.70
135 136 2.306805 ACTCCACATTGAAGATGGCTCA 59.693 45.455 0.00 0.00 33.20 4.26
136 137 2.943690 CTCCACATTGAAGATGGCTCAG 59.056 50.000 0.00 0.00 33.20 3.35
137 138 2.022195 CCACATTGAAGATGGCTCAGG 58.978 52.381 0.00 0.00 0.00 3.86
138 139 2.022195 CACATTGAAGATGGCTCAGGG 58.978 52.381 0.00 0.00 0.00 4.45
139 140 1.030457 CATTGAAGATGGCTCAGGGC 58.970 55.000 0.00 0.00 40.90 5.19
140 141 0.465097 ATTGAAGATGGCTCAGGGCG 60.465 55.000 0.00 0.00 42.94 6.13
141 142 2.203126 GAAGATGGCTCAGGGCGG 60.203 66.667 0.00 0.00 42.94 6.13
142 143 2.688666 AAGATGGCTCAGGGCGGA 60.689 61.111 0.00 0.00 42.94 5.54
143 144 2.049627 GAAGATGGCTCAGGGCGGAT 62.050 60.000 0.00 0.00 42.94 4.18
144 145 2.281345 GATGGCTCAGGGCGGATG 60.281 66.667 0.00 0.00 42.94 3.51
145 146 4.575973 ATGGCTCAGGGCGGATGC 62.576 66.667 0.00 0.00 42.94 3.91
149 150 4.899239 CTCAGGGCGGATGCGACC 62.899 72.222 26.18 26.18 44.10 4.79
151 152 4.899239 CAGGGCGGATGCGACCTC 62.899 72.222 33.49 14.28 44.10 3.85
153 154 4.593864 GGGCGGATGCGACCTCTC 62.594 72.222 26.21 0.00 44.10 3.20
154 155 3.838271 GGCGGATGCGACCTCTCA 61.838 66.667 12.10 0.00 44.10 3.27
155 156 2.583593 GCGGATGCGACCTCTCAC 60.584 66.667 12.10 0.00 0.00 3.51
156 157 3.069980 GCGGATGCGACCTCTCACT 62.070 63.158 12.10 0.00 0.00 3.41
157 158 1.513158 CGGATGCGACCTCTCACTT 59.487 57.895 0.00 0.00 0.00 3.16
158 159 0.108615 CGGATGCGACCTCTCACTTT 60.109 55.000 0.00 0.00 0.00 2.66
159 160 1.363744 GGATGCGACCTCTCACTTTG 58.636 55.000 0.00 0.00 0.00 2.77
160 161 1.066858 GGATGCGACCTCTCACTTTGA 60.067 52.381 0.00 0.00 0.00 2.69
161 162 2.612972 GGATGCGACCTCTCACTTTGAA 60.613 50.000 0.00 0.00 0.00 2.69
162 163 2.154854 TGCGACCTCTCACTTTGAAG 57.845 50.000 0.00 0.00 0.00 3.02
163 164 1.412710 TGCGACCTCTCACTTTGAAGT 59.587 47.619 0.00 0.00 40.60 3.01
164 165 2.158957 TGCGACCTCTCACTTTGAAGTT 60.159 45.455 0.00 0.00 37.08 2.66
165 166 2.221981 GCGACCTCTCACTTTGAAGTTG 59.778 50.000 0.00 0.00 37.08 3.16
166 167 2.221981 CGACCTCTCACTTTGAAGTTGC 59.778 50.000 0.00 0.00 37.08 4.17
167 168 2.213499 ACCTCTCACTTTGAAGTTGCG 58.787 47.619 0.00 0.00 37.08 4.85
168 169 1.069636 CCTCTCACTTTGAAGTTGCGC 60.070 52.381 0.00 0.00 37.08 6.09
169 170 0.944386 TCTCACTTTGAAGTTGCGCC 59.056 50.000 4.18 0.00 37.08 6.53
170 171 0.947244 CTCACTTTGAAGTTGCGCCT 59.053 50.000 4.18 0.00 37.08 5.52
171 172 0.944386 TCACTTTGAAGTTGCGCCTC 59.056 50.000 4.18 0.00 37.08 4.70
172 173 0.384725 CACTTTGAAGTTGCGCCTCG 60.385 55.000 4.18 0.00 37.08 4.63
173 174 1.207593 CTTTGAAGTTGCGCCTCGG 59.792 57.895 4.18 0.00 0.00 4.63
174 175 1.507141 CTTTGAAGTTGCGCCTCGGT 61.507 55.000 4.18 0.00 0.00 4.69
175 176 1.503818 TTTGAAGTTGCGCCTCGGTC 61.504 55.000 4.18 2.11 0.00 4.79
176 177 3.479269 GAAGTTGCGCCTCGGTCG 61.479 66.667 4.18 0.00 0.00 4.79
177 178 3.909258 GAAGTTGCGCCTCGGTCGA 62.909 63.158 4.18 0.00 0.00 4.20
178 179 3.916392 AAGTTGCGCCTCGGTCGAG 62.916 63.158 4.18 12.87 41.63 4.04
186 187 2.182030 CTCGGTCGAGGAAGCCAC 59.818 66.667 12.09 0.00 38.51 5.01
187 188 3.358076 CTCGGTCGAGGAAGCCACC 62.358 68.421 12.09 0.00 38.51 4.61
188 189 3.382832 CGGTCGAGGAAGCCACCT 61.383 66.667 0.00 0.00 43.64 4.00
189 190 2.266055 GGTCGAGGAAGCCACCTG 59.734 66.667 3.95 0.00 40.73 4.00
190 191 2.584391 GGTCGAGGAAGCCACCTGT 61.584 63.158 3.95 0.00 40.73 4.00
191 192 1.374758 GTCGAGGAAGCCACCTGTG 60.375 63.158 3.95 0.00 40.73 3.66
192 193 1.533033 TCGAGGAAGCCACCTGTGA 60.533 57.895 3.95 0.08 40.73 3.58
193 194 1.374758 CGAGGAAGCCACCTGTGAC 60.375 63.158 3.95 0.00 40.73 3.67
194 195 1.374758 GAGGAAGCCACCTGTGACG 60.375 63.158 3.95 0.00 40.73 4.35
195 196 3.050275 GGAAGCCACCTGTGACGC 61.050 66.667 0.00 0.00 0.00 5.19
196 197 3.414700 GAAGCCACCTGTGACGCG 61.415 66.667 3.53 3.53 0.00 6.01
197 198 4.235762 AAGCCACCTGTGACGCGT 62.236 61.111 13.85 13.85 0.00 6.01
198 199 4.664677 AGCCACCTGTGACGCGTC 62.665 66.667 31.66 31.66 0.00 5.19
199 200 4.664677 GCCACCTGTGACGCGTCT 62.665 66.667 36.27 16.27 0.00 4.18
200 201 2.430921 CCACCTGTGACGCGTCTC 60.431 66.667 36.27 32.54 0.00 3.36
201 202 2.430921 CACCTGTGACGCGTCTCC 60.431 66.667 36.27 26.75 0.00 3.71
202 203 4.039357 ACCTGTGACGCGTCTCCG 62.039 66.667 36.27 28.17 37.07 4.63
203 204 4.778415 CCTGTGACGCGTCTCCGG 62.778 72.222 36.27 32.16 33.68 5.14
204 205 4.039357 CTGTGACGCGTCTCCGGT 62.039 66.667 36.27 0.90 33.68 5.28
211 212 2.683859 CGCGTCTCCGGTGTCTACA 61.684 63.158 0.00 0.00 33.68 2.74
212 213 1.136984 GCGTCTCCGGTGTCTACAG 59.863 63.158 0.00 0.00 33.68 2.74
323 325 4.271816 CTCCTACGCGCCGCTGAT 62.272 66.667 5.73 0.00 0.00 2.90
406 409 1.024046 CATGTTCACCGGCGATGGAA 61.024 55.000 9.30 6.08 0.00 3.53
472 478 0.550914 GGCCTTATGTCCCATGTGGA 59.449 55.000 0.00 0.00 42.41 4.02
551 566 2.021457 TCTTATCGTCGGTGCTCATGA 58.979 47.619 0.00 0.00 0.00 3.07
555 570 0.601057 TCGTCGGTGCTCATGAAGAA 59.399 50.000 0.00 0.00 0.00 2.52
664 698 0.808755 ATGGAAATCCGCCGTGTTTC 59.191 50.000 3.67 3.67 39.43 2.78
776 810 2.366301 TTGGATGGCGGCCTCCTA 60.366 61.111 28.72 21.16 32.47 2.94
802 836 2.678580 TCCACGGACAGATGCGGA 60.679 61.111 0.00 0.00 45.25 5.54
804 838 1.375396 CCACGGACAGATGCGGAAA 60.375 57.895 0.00 0.00 45.25 3.13
818 852 2.226912 TGCGGAAAGAAATTTACGGGTG 59.773 45.455 7.39 0.00 0.00 4.61
819 853 2.858839 CGGAAAGAAATTTACGGGTGC 58.141 47.619 0.00 0.00 0.00 5.01
820 854 2.726681 CGGAAAGAAATTTACGGGTGCG 60.727 50.000 0.00 0.00 0.00 5.34
836 870 2.499205 CGCGTTGGAGATGCCCTA 59.501 61.111 0.00 0.00 36.93 3.53
839 873 1.429148 GCGTTGGAGATGCCCTAACG 61.429 60.000 0.00 0.00 40.37 3.18
840 874 1.429148 CGTTGGAGATGCCCTAACGC 61.429 60.000 0.00 0.00 35.60 4.84
841 875 0.392461 GTTGGAGATGCCCTAACGCA 60.392 55.000 0.00 0.00 44.35 5.24
842 876 0.326595 TTGGAGATGCCCTAACGCAA 59.673 50.000 0.00 0.00 43.24 4.85
843 877 0.392461 TGGAGATGCCCTAACGCAAC 60.392 55.000 0.00 0.00 43.24 4.17
844 878 0.392461 GGAGATGCCCTAACGCAACA 60.392 55.000 0.00 0.00 43.24 3.33
845 879 1.448985 GAGATGCCCTAACGCAACAA 58.551 50.000 0.00 0.00 43.24 2.83
846 880 1.810151 GAGATGCCCTAACGCAACAAA 59.190 47.619 0.00 0.00 43.24 2.83
847 881 2.227865 GAGATGCCCTAACGCAACAAAA 59.772 45.455 0.00 0.00 43.24 2.44
848 882 2.625790 AGATGCCCTAACGCAACAAAAA 59.374 40.909 0.00 0.00 43.24 1.94
873 907 9.869757 AAAAATTCCAGGTACATGTAAAATAGC 57.130 29.630 7.25 0.00 0.00 2.97
874 908 8.588290 AAATTCCAGGTACATGTAAAATAGCA 57.412 30.769 7.25 0.00 0.00 3.49
875 909 8.588290 AATTCCAGGTACATGTAAAATAGCAA 57.412 30.769 7.25 0.00 0.00 3.91
876 910 8.588290 ATTCCAGGTACATGTAAAATAGCAAA 57.412 30.769 7.25 0.00 0.00 3.68
877 911 8.410673 TTCCAGGTACATGTAAAATAGCAAAA 57.589 30.769 7.25 0.00 0.00 2.44
878 912 7.822658 TCCAGGTACATGTAAAATAGCAAAAC 58.177 34.615 7.25 0.00 0.00 2.43
879 913 7.033185 CCAGGTACATGTAAAATAGCAAAACC 58.967 38.462 7.25 2.41 0.00 3.27
880 914 7.033185 CAGGTACATGTAAAATAGCAAAACCC 58.967 38.462 7.25 0.00 0.00 4.11
881 915 6.951778 AGGTACATGTAAAATAGCAAAACCCT 59.048 34.615 7.25 2.16 0.00 4.34
882 916 7.453439 AGGTACATGTAAAATAGCAAAACCCTT 59.547 33.333 7.25 0.00 0.00 3.95
883 917 7.544217 GGTACATGTAAAATAGCAAAACCCTTG 59.456 37.037 7.25 0.00 0.00 3.61
884 918 7.296628 ACATGTAAAATAGCAAAACCCTTGA 57.703 32.000 0.00 0.00 0.00 3.02
897 931 7.779798 AGCAAAACCCTTGATATATAAGAGCAA 59.220 33.333 1.73 0.00 0.00 3.91
912 946 3.173965 AGAGCAAGTACCACACTACCAT 58.826 45.455 0.00 0.00 36.04 3.55
927 961 0.896940 ACCATTGCCACCTGAGCTTG 60.897 55.000 0.00 0.00 0.00 4.01
928 962 1.214589 CATTGCCACCTGAGCTTGC 59.785 57.895 0.00 0.00 0.00 4.01
929 963 1.076192 ATTGCCACCTGAGCTTGCT 59.924 52.632 0.00 0.00 0.00 3.91
941 976 1.592081 GAGCTTGCTAATGCTGAGTCG 59.408 52.381 0.00 0.00 39.91 4.18
971 1007 0.620556 AAGAACCATGCTCCCGTGAT 59.379 50.000 0.00 0.00 0.00 3.06
978 1014 2.027837 CCATGCTCCCGTGATATCATCA 60.028 50.000 9.02 1.63 36.84 3.07
1158 1194 3.494254 ACCCACTTCAACGCCCCA 61.494 61.111 0.00 0.00 0.00 4.96
1161 1197 1.966451 CCACTTCAACGCCCCAGAC 60.966 63.158 0.00 0.00 0.00 3.51
1167 1203 4.096003 AACGCCCCAGACCCATCG 62.096 66.667 0.00 0.00 0.00 3.84
1267 1303 1.737735 CACATCCTCGCGCTCAACA 60.738 57.895 5.56 0.00 0.00 3.33
1331 1367 1.340795 GGAAGAGTACTCCAGGGACGA 60.341 57.143 19.38 0.00 0.00 4.20
1375 1411 3.905454 ACCTGCTGTCCATGGTGA 58.095 55.556 12.58 0.00 0.00 4.02
1449 1485 2.049156 TGCCTCTCGTGCTTCGTG 60.049 61.111 2.39 0.82 40.80 4.35
1527 1563 8.571336 CATAATTCCCATGTTTATCTCTTGGAC 58.429 37.037 0.00 0.00 33.67 4.02
1532 1568 4.512944 CCATGTTTATCTCTTGGACCGATG 59.487 45.833 0.00 0.00 33.67 3.84
1543 1579 1.265454 GGACCGATGGACTGACCCTT 61.265 60.000 0.00 0.00 38.00 3.95
1549 1585 1.541588 GATGGACTGACCCTTGTTTGC 59.458 52.381 0.00 0.00 38.00 3.68
1695 1731 0.616891 AAGCGTCCTCCGGGTTAATT 59.383 50.000 0.00 0.00 36.94 1.40
1707 1743 4.758165 TCCGGGTTAATTCTCAACACTTTC 59.242 41.667 0.00 0.00 0.00 2.62
1794 1830 2.266055 CCGCTCCACCTGTTCTCC 59.734 66.667 0.00 0.00 0.00 3.71
1896 1932 1.080705 GCTGTACGTGAGCTTCGGT 60.081 57.895 12.75 3.95 33.37 4.69
2304 2461 4.175489 ATCCGTCGGCTCGTCACG 62.175 66.667 6.34 0.00 0.00 4.35
2313 2470 3.744719 CTCGTCACGGGGAGCGAA 61.745 66.667 0.00 0.00 31.83 4.70
2354 2511 2.262915 CGGCGAGCTGAAGAAGGT 59.737 61.111 0.00 0.00 40.07 3.50
2412 2569 1.038681 TCGCCATCGGTAAGCTGGTA 61.039 55.000 0.00 0.00 38.36 3.25
2415 2572 1.538419 GCCATCGGTAAGCTGGTAGAC 60.538 57.143 0.00 0.00 38.36 2.59
2435 2598 1.028330 CACATGCTGGCACTGTAGGG 61.028 60.000 0.00 0.00 0.00 3.53
2436 2599 1.452651 CATGCTGGCACTGTAGGGG 60.453 63.158 0.00 0.00 0.00 4.79
2437 2600 1.616327 ATGCTGGCACTGTAGGGGA 60.616 57.895 0.00 0.00 0.00 4.81
2438 2601 1.207488 ATGCTGGCACTGTAGGGGAA 61.207 55.000 0.00 0.00 0.00 3.97
2490 2653 2.872245 TGCCTCTCGTGCTATTTTATGC 59.128 45.455 0.00 0.00 0.00 3.14
2492 2655 2.808543 CCTCTCGTGCTATTTTATGCCC 59.191 50.000 0.00 0.00 0.00 5.36
2504 2667 6.531594 GCTATTTTATGCCCTTTTTCACTGTC 59.468 38.462 0.00 0.00 0.00 3.51
2522 2685 2.093921 TGTCTTCAACGGTGTCAGTTCA 60.094 45.455 0.00 0.46 0.00 3.18
2541 2704 9.155975 TCAGTTCAGAATCTCTGTTAATTAAGC 57.844 33.333 0.00 0.00 44.58 3.09
2544 2707 7.525688 TCAGAATCTCTGTTAATTAAGCACG 57.474 36.000 0.00 0.00 44.58 5.34
2545 2708 7.097192 TCAGAATCTCTGTTAATTAAGCACGT 58.903 34.615 0.00 0.00 44.58 4.49
2546 2709 8.248253 TCAGAATCTCTGTTAATTAAGCACGTA 58.752 33.333 0.00 0.00 44.58 3.57
2547 2710 8.321716 CAGAATCTCTGTTAATTAAGCACGTAC 58.678 37.037 0.00 0.00 39.58 3.67
2548 2711 8.251721 AGAATCTCTGTTAATTAAGCACGTACT 58.748 33.333 0.00 0.00 0.00 2.73
2549 2712 9.512435 GAATCTCTGTTAATTAAGCACGTACTA 57.488 33.333 0.00 0.00 0.00 1.82
2550 2713 8.853469 ATCTCTGTTAATTAAGCACGTACTAC 57.147 34.615 0.00 0.00 0.00 2.73
2553 2716 7.475015 TCTGTTAATTAAGCACGTACTACGAT 58.525 34.615 15.49 1.76 46.05 3.73
2555 2718 9.390795 CTGTTAATTAAGCACGTACTACGATAT 57.609 33.333 15.49 1.76 46.05 1.63
2560 2723 9.604626 AATTAAGCACGTACTACGATATACTTC 57.395 33.333 15.49 0.00 46.05 3.01
2561 2724 5.604010 AGCACGTACTACGATATACTTCC 57.396 43.478 15.49 0.00 46.05 3.46
2562 2725 5.303971 AGCACGTACTACGATATACTTCCT 58.696 41.667 15.49 0.00 46.05 3.36
2563 2726 5.407995 AGCACGTACTACGATATACTTCCTC 59.592 44.000 15.49 0.00 46.05 3.71
2564 2727 5.390356 GCACGTACTACGATATACTTCCTCC 60.390 48.000 15.49 0.00 46.05 4.30
2565 2728 4.926238 ACGTACTACGATATACTTCCTCCG 59.074 45.833 15.49 0.00 46.05 4.63
2566 2729 4.926238 CGTACTACGATATACTTCCTCCGT 59.074 45.833 2.17 0.00 46.05 4.69
2568 2731 4.322567 ACTACGATATACTTCCTCCGTCC 58.677 47.826 0.00 0.00 0.00 4.79
2569 2732 2.512705 ACGATATACTTCCTCCGTCCC 58.487 52.381 0.00 0.00 0.00 4.46
2570 2733 1.467734 CGATATACTTCCTCCGTCCCG 59.532 57.143 0.00 0.00 0.00 5.14
2573 2736 2.442236 ATACTTCCTCCGTCCCGTAA 57.558 50.000 0.00 0.00 0.00 3.18
2574 2737 2.442236 TACTTCCTCCGTCCCGTAAT 57.558 50.000 0.00 0.00 0.00 1.89
2575 2738 0.822164 ACTTCCTCCGTCCCGTAATG 59.178 55.000 0.00 0.00 0.00 1.90
2576 2739 0.822164 CTTCCTCCGTCCCGTAATGT 59.178 55.000 0.00 0.00 0.00 2.71
2578 2741 1.683943 TCCTCCGTCCCGTAATGTAG 58.316 55.000 0.00 0.00 0.00 2.74
2579 2742 0.672342 CCTCCGTCCCGTAATGTAGG 59.328 60.000 0.00 0.00 0.00 3.18
2580 2743 1.683943 CTCCGTCCCGTAATGTAGGA 58.316 55.000 0.00 0.00 0.00 2.94
2581 2744 1.336125 CTCCGTCCCGTAATGTAGGAC 59.664 57.143 0.00 0.00 45.49 3.85
2582 2745 1.064463 TCCGTCCCGTAATGTAGGACT 60.064 52.381 6.83 0.00 46.53 3.85
2584 2747 2.167075 CCGTCCCGTAATGTAGGACTTT 59.833 50.000 6.83 0.00 46.53 2.66
2585 2748 3.368739 CCGTCCCGTAATGTAGGACTTTT 60.369 47.826 6.83 0.00 46.53 2.27
2636 2845 5.884792 CGTCTTATATTATAGGACGGGGAGT 59.115 44.000 27.66 0.00 43.69 3.85
2637 2846 7.050377 CGTCTTATATTATAGGACGGGGAGTA 58.950 42.308 27.66 0.00 43.69 2.59
2638 2847 7.011857 CGTCTTATATTATAGGACGGGGAGTAC 59.988 44.444 27.66 4.04 43.69 2.73
2671 2880 5.250313 AGTCAGTCTTCCCTTTGATTCTCAT 59.750 40.000 0.00 0.00 0.00 2.90
2681 2890 7.829725 TCCCTTTGATTCTCATGTGTAAATTG 58.170 34.615 0.00 0.00 0.00 2.32
2820 3031 4.855388 GTGCTGTTGTCATGATGATTCAAC 59.145 41.667 17.20 17.20 38.82 3.18
2866 3081 3.066369 ACTCGTGATACATGCTGTACG 57.934 47.619 0.00 0.00 35.42 3.67
2867 3082 2.681344 ACTCGTGATACATGCTGTACGA 59.319 45.455 12.97 12.97 36.78 3.43
2868 3083 3.128068 ACTCGTGATACATGCTGTACGAA 59.872 43.478 14.06 2.99 38.07 3.85
2869 3084 3.691498 TCGTGATACATGCTGTACGAAG 58.309 45.455 11.72 0.00 36.37 3.79
2870 3085 3.375922 TCGTGATACATGCTGTACGAAGA 59.624 43.478 11.72 1.80 36.37 2.87
2871 3086 3.482472 CGTGATACATGCTGTACGAAGAC 59.518 47.826 7.19 0.00 35.42 3.01
2872 3087 4.673441 GTGATACATGCTGTACGAAGACT 58.327 43.478 0.00 0.00 35.42 3.24
2873 3088 4.735822 GTGATACATGCTGTACGAAGACTC 59.264 45.833 0.00 0.00 35.42 3.36
2885 3100 3.071786 CGAAGACTCGTGATACATGCT 57.928 47.619 0.00 0.00 40.33 3.79
2886 3101 2.786027 CGAAGACTCGTGATACATGCTG 59.214 50.000 0.00 0.00 40.33 4.41
2887 3102 3.732169 CGAAGACTCGTGATACATGCTGT 60.732 47.826 0.00 0.00 40.33 4.40
2888 3103 4.495844 CGAAGACTCGTGATACATGCTGTA 60.496 45.833 0.00 0.00 40.33 2.74
2889 3104 4.294416 AGACTCGTGATACATGCTGTAC 57.706 45.455 0.00 0.00 35.42 2.90
2923 3138 7.435192 CGTGATACATGTGCTAAGACTTCATAA 59.565 37.037 9.11 0.00 0.00 1.90
2952 3170 2.253603 GCAGTCGATTCAAACATTGGC 58.746 47.619 0.00 0.00 0.00 4.52
2970 3188 5.843673 TTGGCTATTTCTGTGTTTTGTGA 57.156 34.783 0.00 0.00 0.00 3.58
2973 3191 4.622740 GGCTATTTCTGTGTTTTGTGATGC 59.377 41.667 0.00 0.00 0.00 3.91
3052 3283 1.331756 CTTAATGCTAGTTGGCAGCCG 59.668 52.381 7.03 0.00 45.75 5.52
3053 3284 0.251916 TAATGCTAGTTGGCAGCCGT 59.748 50.000 7.03 0.00 45.75 5.68
3061 3292 1.202405 AGTTGGCAGCCGTTTCAAAAG 60.202 47.619 7.03 0.00 0.00 2.27
3077 3308 3.801594 TCAAAAGTTTGGCGATTTTGAGC 59.198 39.130 10.72 0.00 44.01 4.26
3086 3317 1.006832 CGATTTTGAGCAGTACCGGG 58.993 55.000 6.32 0.00 0.00 5.73
3204 3443 5.132897 TGAAGTTTGCGAATATTTGCCTT 57.867 34.783 22.32 17.86 36.74 4.35
3209 3448 3.149436 TGCGAATATTTGCCTTTCTGC 57.851 42.857 22.32 3.36 36.74 4.26
3210 3449 2.754552 TGCGAATATTTGCCTTTCTGCT 59.245 40.909 22.32 0.00 36.74 4.24
3211 3450 3.181497 TGCGAATATTTGCCTTTCTGCTC 60.181 43.478 22.32 0.00 36.74 4.26
3212 3451 3.611517 CGAATATTTGCCTTTCTGCTCG 58.388 45.455 0.00 0.00 0.00 5.03
3213 3452 3.546815 CGAATATTTGCCTTTCTGCTCGG 60.547 47.826 0.00 0.00 0.00 4.63
3214 3453 1.750193 TATTTGCCTTTCTGCTCGGG 58.250 50.000 0.00 0.00 0.00 5.14
3215 3454 0.251341 ATTTGCCTTTCTGCTCGGGT 60.251 50.000 0.00 0.00 0.00 5.28
3216 3455 0.889186 TTTGCCTTTCTGCTCGGGTC 60.889 55.000 0.00 0.00 0.00 4.46
3217 3456 2.050836 TTGCCTTTCTGCTCGGGTCA 62.051 55.000 0.00 0.00 0.00 4.02
3218 3457 2.035442 GCCTTTCTGCTCGGGTCAC 61.035 63.158 0.00 0.00 0.00 3.67
3219 3458 1.371183 CCTTTCTGCTCGGGTCACA 59.629 57.895 0.00 0.00 0.00 3.58
3220 3459 0.250295 CCTTTCTGCTCGGGTCACAA 60.250 55.000 0.00 0.00 0.00 3.33
3221 3460 0.868406 CTTTCTGCTCGGGTCACAAC 59.132 55.000 0.00 0.00 0.00 3.32
3222 3461 0.468226 TTTCTGCTCGGGTCACAACT 59.532 50.000 0.00 0.00 0.00 3.16
3223 3462 1.334160 TTCTGCTCGGGTCACAACTA 58.666 50.000 0.00 0.00 0.00 2.24
3224 3463 0.888619 TCTGCTCGGGTCACAACTAG 59.111 55.000 0.00 0.00 0.00 2.57
3225 3464 0.603569 CTGCTCGGGTCACAACTAGT 59.396 55.000 0.00 0.00 0.00 2.57
3226 3465 0.601558 TGCTCGGGTCACAACTAGTC 59.398 55.000 0.00 0.00 0.00 2.59
3227 3466 0.601558 GCTCGGGTCACAACTAGTCA 59.398 55.000 0.00 0.00 0.00 3.41
3228 3467 1.204941 GCTCGGGTCACAACTAGTCAT 59.795 52.381 0.00 0.00 0.00 3.06
3229 3468 2.426024 GCTCGGGTCACAACTAGTCATA 59.574 50.000 0.00 0.00 0.00 2.15
3230 3469 3.734293 GCTCGGGTCACAACTAGTCATAC 60.734 52.174 0.00 0.00 0.00 2.39
3231 3470 2.756760 TCGGGTCACAACTAGTCATACC 59.243 50.000 0.00 2.00 0.00 2.73
3232 3471 2.758979 CGGGTCACAACTAGTCATACCT 59.241 50.000 13.31 0.00 0.00 3.08
3233 3472 3.194968 CGGGTCACAACTAGTCATACCTT 59.805 47.826 13.31 0.00 0.00 3.50
3234 3473 4.322499 CGGGTCACAACTAGTCATACCTTT 60.322 45.833 13.31 0.00 0.00 3.11
3235 3474 5.176592 GGGTCACAACTAGTCATACCTTTC 58.823 45.833 13.31 0.00 0.00 2.62
3236 3475 5.176592 GGTCACAACTAGTCATACCTTTCC 58.823 45.833 0.00 0.00 0.00 3.13
3237 3476 5.279809 GGTCACAACTAGTCATACCTTTCCA 60.280 44.000 0.00 0.00 0.00 3.53
3238 3477 6.407202 GTCACAACTAGTCATACCTTTCCAT 58.593 40.000 0.00 0.00 0.00 3.41
3239 3478 6.313905 GTCACAACTAGTCATACCTTTCCATG 59.686 42.308 0.00 0.00 0.00 3.66
3240 3479 6.212589 TCACAACTAGTCATACCTTTCCATGA 59.787 38.462 0.00 0.00 0.00 3.07
3241 3480 6.878923 CACAACTAGTCATACCTTTCCATGAA 59.121 38.462 0.00 0.00 33.15 2.57
3242 3481 7.390440 CACAACTAGTCATACCTTTCCATGAAA 59.610 37.037 0.00 0.00 33.15 2.69
3243 3482 7.942341 ACAACTAGTCATACCTTTCCATGAAAA 59.058 33.333 0.00 0.00 33.15 2.29
3244 3483 8.792633 CAACTAGTCATACCTTTCCATGAAAAA 58.207 33.333 0.00 0.00 33.15 1.94
3270 3509 9.454859 AACATGGGTTAATTTTTGAAAACTTGA 57.545 25.926 3.85 0.00 34.87 3.02
3271 3510 9.108284 ACATGGGTTAATTTTTGAAAACTTGAG 57.892 29.630 3.85 0.00 0.00 3.02
3272 3511 8.558700 CATGGGTTAATTTTTGAAAACTTGAGG 58.441 33.333 3.85 0.00 0.00 3.86
3273 3512 7.051000 TGGGTTAATTTTTGAAAACTTGAGGG 58.949 34.615 3.85 0.00 0.00 4.30
3274 3513 7.051623 GGGTTAATTTTTGAAAACTTGAGGGT 58.948 34.615 3.85 0.00 0.00 4.34
3275 3514 8.205512 GGGTTAATTTTTGAAAACTTGAGGGTA 58.794 33.333 3.85 0.00 0.00 3.69
3276 3515 9.602568 GGTTAATTTTTGAAAACTTGAGGGTAA 57.397 29.630 3.85 0.00 0.00 2.85
3279 3518 8.942338 AATTTTTGAAAACTTGAGGGTAAGAC 57.058 30.769 0.00 0.00 0.00 3.01
3280 3519 5.744666 TTTGAAAACTTGAGGGTAAGACG 57.255 39.130 0.00 0.00 0.00 4.18
3281 3520 4.675976 TGAAAACTTGAGGGTAAGACGA 57.324 40.909 0.00 0.00 0.00 4.20
3282 3521 4.374399 TGAAAACTTGAGGGTAAGACGAC 58.626 43.478 0.00 0.00 0.00 4.34
3283 3522 2.719426 AACTTGAGGGTAAGACGACG 57.281 50.000 0.00 0.00 0.00 5.12
3284 3523 0.243095 ACTTGAGGGTAAGACGACGC 59.757 55.000 0.00 0.00 0.00 5.19
3285 3524 0.526662 CTTGAGGGTAAGACGACGCT 59.473 55.000 0.00 0.00 44.59 5.07
3287 3526 4.738829 AGGGTAAGACGACGCTCT 57.261 55.556 0.00 0.00 38.11 4.09
3288 3527 2.958513 AGGGTAAGACGACGCTCTT 58.041 52.632 14.22 14.22 38.11 2.85
3289 3528 0.810016 AGGGTAAGACGACGCTCTTC 59.190 55.000 13.49 7.83 38.11 2.87
3290 3529 0.524862 GGGTAAGACGACGCTCTTCA 59.475 55.000 13.49 2.57 32.54 3.02
3291 3530 1.467713 GGGTAAGACGACGCTCTTCAG 60.468 57.143 13.49 0.00 32.54 3.02
3292 3531 1.467713 GGTAAGACGACGCTCTTCAGG 60.468 57.143 13.49 0.00 32.54 3.86
3293 3532 0.809385 TAAGACGACGCTCTTCAGGG 59.191 55.000 13.49 0.00 38.57 4.45
3295 3534 1.179814 AGACGACGCTCTTCAGGGTT 61.180 55.000 0.00 0.00 45.55 4.11
3296 3535 0.319641 GACGACGCTCTTCAGGGTTT 60.320 55.000 0.00 0.00 45.55 3.27
3297 3536 0.106149 ACGACGCTCTTCAGGGTTTT 59.894 50.000 0.00 0.00 45.55 2.43
3298 3537 1.226746 CGACGCTCTTCAGGGTTTTT 58.773 50.000 0.00 0.00 45.55 1.94
3325 3564 9.712305 TTTTGTTCAAAGAATTTTTGTGGTAGA 57.288 25.926 10.72 0.00 35.03 2.59
3326 3565 9.883142 TTTGTTCAAAGAATTTTTGTGGTAGAT 57.117 25.926 10.72 0.00 35.03 1.98
3327 3566 9.883142 TTGTTCAAAGAATTTTTGTGGTAGATT 57.117 25.926 10.72 0.00 35.03 2.40
3328 3567 9.883142 TGTTCAAAGAATTTTTGTGGTAGATTT 57.117 25.926 10.72 0.00 35.03 2.17
3337 3576 9.942850 AATTTTTGTGGTAGATTTAAGGATTGG 57.057 29.630 0.00 0.00 0.00 3.16
3338 3577 8.713708 TTTTTGTGGTAGATTTAAGGATTGGA 57.286 30.769 0.00 0.00 0.00 3.53
3339 3578 8.713708 TTTTGTGGTAGATTTAAGGATTGGAA 57.286 30.769 0.00 0.00 0.00 3.53
3340 3579 8.893563 TTTGTGGTAGATTTAAGGATTGGAAT 57.106 30.769 0.00 0.00 0.00 3.01
3341 3580 8.519799 TTGTGGTAGATTTAAGGATTGGAATC 57.480 34.615 0.00 0.00 34.33 2.52
3357 3596 8.552083 GATTGGAATCCTTGTTAATTTTTGCT 57.448 30.769 0.00 0.00 0.00 3.91
3358 3597 9.651913 GATTGGAATCCTTGTTAATTTTTGCTA 57.348 29.630 0.00 0.00 0.00 3.49
3359 3598 8.825667 TTGGAATCCTTGTTAATTTTTGCTAC 57.174 30.769 0.00 0.00 0.00 3.58
3360 3599 7.087639 TGGAATCCTTGTTAATTTTTGCTACG 58.912 34.615 0.00 0.00 0.00 3.51
3361 3600 7.088272 GGAATCCTTGTTAATTTTTGCTACGT 58.912 34.615 0.00 0.00 0.00 3.57
3362 3601 7.272731 GGAATCCTTGTTAATTTTTGCTACGTC 59.727 37.037 0.00 0.00 0.00 4.34
3363 3602 5.681880 TCCTTGTTAATTTTTGCTACGTCG 58.318 37.500 0.00 0.00 0.00 5.12
3364 3603 4.849383 CCTTGTTAATTTTTGCTACGTCGG 59.151 41.667 0.00 0.00 0.00 4.79
3365 3604 5.421212 TTGTTAATTTTTGCTACGTCGGT 57.579 34.783 0.00 0.00 0.00 4.69
3366 3605 5.421212 TGTTAATTTTTGCTACGTCGGTT 57.579 34.783 0.00 0.00 0.00 4.44
3367 3606 5.206299 TGTTAATTTTTGCTACGTCGGTTG 58.794 37.500 0.00 0.00 0.00 3.77
3368 3607 3.974871 AATTTTTGCTACGTCGGTTGT 57.025 38.095 0.00 0.00 0.00 3.32
3369 3608 3.974871 ATTTTTGCTACGTCGGTTGTT 57.025 38.095 0.00 0.00 0.00 2.83
3370 3609 3.761311 TTTTTGCTACGTCGGTTGTTT 57.239 38.095 0.00 0.00 0.00 2.83
3371 3610 2.741122 TTTGCTACGTCGGTTGTTTG 57.259 45.000 0.00 0.00 0.00 2.93
3372 3611 1.937278 TTGCTACGTCGGTTGTTTGA 58.063 45.000 0.00 0.00 0.00 2.69
3373 3612 2.157834 TGCTACGTCGGTTGTTTGAT 57.842 45.000 0.00 0.00 0.00 2.57
3374 3613 2.485903 TGCTACGTCGGTTGTTTGATT 58.514 42.857 0.00 0.00 0.00 2.57
3375 3614 2.477375 TGCTACGTCGGTTGTTTGATTC 59.523 45.455 0.00 0.00 0.00 2.52
3376 3615 2.471749 GCTACGTCGGTTGTTTGATTCG 60.472 50.000 0.00 0.00 0.00 3.34
3377 3616 1.574134 ACGTCGGTTGTTTGATTCGT 58.426 45.000 0.00 0.00 0.00 3.85
3378 3617 2.741612 ACGTCGGTTGTTTGATTCGTA 58.258 42.857 0.00 0.00 0.00 3.43
3379 3618 3.319755 ACGTCGGTTGTTTGATTCGTAT 58.680 40.909 0.00 0.00 0.00 3.06
3380 3619 3.122278 ACGTCGGTTGTTTGATTCGTATG 59.878 43.478 0.00 0.00 0.00 2.39
3381 3620 3.365520 CGTCGGTTGTTTGATTCGTATGA 59.634 43.478 0.00 0.00 0.00 2.15
3382 3621 4.634991 GTCGGTTGTTTGATTCGTATGAC 58.365 43.478 0.00 0.00 0.00 3.06
3383 3622 3.680937 TCGGTTGTTTGATTCGTATGACC 59.319 43.478 0.00 0.00 0.00 4.02
3384 3623 3.482923 CGGTTGTTTGATTCGTATGACCG 60.483 47.826 0.00 0.00 41.01 4.79
3385 3624 3.680937 GGTTGTTTGATTCGTATGACCGA 59.319 43.478 0.00 0.00 34.52 4.69
3396 3635 6.829229 TTCGTATGACCGAATCCTACATAT 57.171 37.500 0.00 0.00 41.54 1.78
3397 3636 6.829229 TCGTATGACCGAATCCTACATATT 57.171 37.500 0.00 0.00 33.15 1.28
3398 3637 7.223260 TCGTATGACCGAATCCTACATATTT 57.777 36.000 0.00 0.00 33.15 1.40
3399 3638 7.663827 TCGTATGACCGAATCCTACATATTTT 58.336 34.615 0.00 0.00 33.15 1.82
3400 3639 8.145767 TCGTATGACCGAATCCTACATATTTTT 58.854 33.333 0.00 0.00 33.15 1.94
3430 3669 5.904362 AAGATCCCTTTGCACTACATTTC 57.096 39.130 0.00 0.00 0.00 2.17
3431 3670 4.922206 AGATCCCTTTGCACTACATTTCA 58.078 39.130 0.00 0.00 0.00 2.69
3432 3671 5.513233 AGATCCCTTTGCACTACATTTCAT 58.487 37.500 0.00 0.00 0.00 2.57
3433 3672 5.954150 AGATCCCTTTGCACTACATTTCATT 59.046 36.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.314331 AGGCGTGGGAGTGGTCTG 61.314 66.667 0.00 0.00 0.00 3.51
1 2 3.314331 CAGGCGTGGGAGTGGTCT 61.314 66.667 0.00 0.00 0.00 3.85
4 5 4.335647 AAGCAGGCGTGGGAGTGG 62.336 66.667 8.72 0.00 0.00 4.00
5 6 2.743928 GAAGCAGGCGTGGGAGTG 60.744 66.667 8.72 0.00 0.00 3.51
6 7 2.925170 AGAAGCAGGCGTGGGAGT 60.925 61.111 8.72 0.00 0.00 3.85
7 8 2.435586 CAGAAGCAGGCGTGGGAG 60.436 66.667 8.72 0.00 0.00 4.30
8 9 2.922503 TCAGAAGCAGGCGTGGGA 60.923 61.111 8.72 0.00 0.00 4.37
9 10 2.743928 GTCAGAAGCAGGCGTGGG 60.744 66.667 8.72 0.00 0.00 4.61
10 11 2.743928 GGTCAGAAGCAGGCGTGG 60.744 66.667 8.72 0.00 0.00 4.94
11 12 2.031012 TGGTCAGAAGCAGGCGTG 59.969 61.111 1.01 1.01 0.00 5.34
12 13 2.031163 GTGGTCAGAAGCAGGCGT 59.969 61.111 0.00 0.00 32.53 5.68
13 14 2.743928 GGTGGTCAGAAGCAGGCG 60.744 66.667 0.00 0.00 32.53 5.52
14 15 2.360475 GGGTGGTCAGAAGCAGGC 60.360 66.667 0.00 0.00 32.53 4.85
15 16 1.002868 CAGGGTGGTCAGAAGCAGG 60.003 63.158 0.00 0.00 32.53 4.85
16 17 0.036577 CTCAGGGTGGTCAGAAGCAG 60.037 60.000 0.00 0.00 32.53 4.24
17 18 2.061220 CTCAGGGTGGTCAGAAGCA 58.939 57.895 0.00 0.00 0.00 3.91
18 19 1.376553 GCTCAGGGTGGTCAGAAGC 60.377 63.158 0.00 0.00 0.00 3.86
19 20 1.298014 GGCTCAGGGTGGTCAGAAG 59.702 63.158 0.00 0.00 0.00 2.85
20 21 1.461268 TGGCTCAGGGTGGTCAGAA 60.461 57.895 0.00 0.00 0.00 3.02
21 22 2.204034 TGGCTCAGGGTGGTCAGA 59.796 61.111 0.00 0.00 0.00 3.27
22 23 2.348998 GTGGCTCAGGGTGGTCAG 59.651 66.667 0.00 0.00 0.00 3.51
23 24 3.249189 GGTGGCTCAGGGTGGTCA 61.249 66.667 0.00 0.00 0.00 4.02
24 25 4.035102 GGGTGGCTCAGGGTGGTC 62.035 72.222 0.00 0.00 0.00 4.02
25 26 4.918360 TGGGTGGCTCAGGGTGGT 62.918 66.667 0.00 0.00 0.00 4.16
26 27 3.145473 TTTGGGTGGCTCAGGGTGG 62.145 63.158 0.00 0.00 0.00 4.61
27 28 1.903404 GTTTGGGTGGCTCAGGGTG 60.903 63.158 0.00 0.00 0.00 4.61
28 29 2.520968 GTTTGGGTGGCTCAGGGT 59.479 61.111 0.00 0.00 0.00 4.34
29 30 2.283173 GGTTTGGGTGGCTCAGGG 60.283 66.667 0.00 0.00 0.00 4.45
30 31 2.283173 GGGTTTGGGTGGCTCAGG 60.283 66.667 0.00 0.00 0.00 3.86
31 32 2.283173 GGGGTTTGGGTGGCTCAG 60.283 66.667 0.00 0.00 0.00 3.35
32 33 2.780924 AGGGGTTTGGGTGGCTCA 60.781 61.111 0.00 0.00 0.00 4.26
33 34 2.035783 GAGGGGTTTGGGTGGCTC 59.964 66.667 0.00 0.00 0.00 4.70
34 35 3.590574 GGAGGGGTTTGGGTGGCT 61.591 66.667 0.00 0.00 0.00 4.75
35 36 4.696805 GGGAGGGGTTTGGGTGGC 62.697 72.222 0.00 0.00 0.00 5.01
36 37 2.863988 AGGGAGGGGTTTGGGTGG 60.864 66.667 0.00 0.00 0.00 4.61
37 38 2.763902 GAGGGAGGGGTTTGGGTG 59.236 66.667 0.00 0.00 0.00 4.61
38 39 2.933834 CGAGGGAGGGGTTTGGGT 60.934 66.667 0.00 0.00 0.00 4.51
39 40 4.426313 GCGAGGGAGGGGTTTGGG 62.426 72.222 0.00 0.00 0.00 4.12
40 41 4.426313 GGCGAGGGAGGGGTTTGG 62.426 72.222 0.00 0.00 0.00 3.28
41 42 4.426313 GGGCGAGGGAGGGGTTTG 62.426 72.222 0.00 0.00 0.00 2.93
75 76 3.044059 GAATGTGGGCAGCTGCGTC 62.044 63.158 31.19 24.81 43.26 5.19
76 77 3.058160 GAATGTGGGCAGCTGCGT 61.058 61.111 31.19 12.45 43.26 5.24
77 78 2.412323 ATGAATGTGGGCAGCTGCG 61.412 57.895 31.19 0.00 43.26 5.18
78 79 1.141019 CATGAATGTGGGCAGCTGC 59.859 57.895 30.88 30.88 41.14 5.25
79 80 1.141019 GCATGAATGTGGGCAGCTG 59.859 57.895 10.11 10.11 0.00 4.24
80 81 2.056223 GGCATGAATGTGGGCAGCT 61.056 57.895 0.00 0.00 0.00 4.24
81 82 2.497770 GGCATGAATGTGGGCAGC 59.502 61.111 0.00 0.00 0.00 5.25
82 83 2.802792 CGGCATGAATGTGGGCAG 59.197 61.111 0.00 0.00 0.00 4.85
83 84 3.451004 GCGGCATGAATGTGGGCA 61.451 61.111 0.00 0.00 0.00 5.36
84 85 3.142838 AGCGGCATGAATGTGGGC 61.143 61.111 1.45 0.00 0.00 5.36
85 86 0.747644 TACAGCGGCATGAATGTGGG 60.748 55.000 1.45 0.00 0.00 4.61
86 87 0.659427 CTACAGCGGCATGAATGTGG 59.341 55.000 1.45 0.00 0.00 4.17
87 88 1.596260 CTCTACAGCGGCATGAATGTG 59.404 52.381 1.45 0.00 0.00 3.21
88 89 1.473965 CCTCTACAGCGGCATGAATGT 60.474 52.381 1.45 0.00 0.00 2.71
89 90 1.224075 CCTCTACAGCGGCATGAATG 58.776 55.000 1.45 0.00 0.00 2.67
90 91 0.107456 CCCTCTACAGCGGCATGAAT 59.893 55.000 1.45 0.00 0.00 2.57
91 92 1.522092 CCCTCTACAGCGGCATGAA 59.478 57.895 1.45 0.00 0.00 2.57
92 93 3.094062 GCCCTCTACAGCGGCATGA 62.094 63.158 1.45 0.00 42.52 3.07
93 94 2.590007 GCCCTCTACAGCGGCATG 60.590 66.667 1.45 0.01 42.52 4.06
99 100 3.724914 GAGTGGCGCCCTCTACAGC 62.725 68.421 27.75 12.69 0.00 4.40
100 101 2.496817 GAGTGGCGCCCTCTACAG 59.503 66.667 27.75 0.00 0.00 2.74
101 102 3.075005 GGAGTGGCGCCCTCTACA 61.075 66.667 31.11 10.86 29.11 2.74
102 103 3.075005 TGGAGTGGCGCCCTCTAC 61.075 66.667 31.11 26.04 0.00 2.59
103 104 3.075005 GTGGAGTGGCGCCCTCTA 61.075 66.667 31.11 26.56 0.00 2.43
105 106 3.628646 AATGTGGAGTGGCGCCCTC 62.629 63.158 27.35 27.35 0.00 4.30
106 107 3.650950 AATGTGGAGTGGCGCCCT 61.651 61.111 26.77 20.80 0.00 5.19
107 108 3.443045 CAATGTGGAGTGGCGCCC 61.443 66.667 26.77 15.80 0.00 6.13
108 109 1.926511 CTTCAATGTGGAGTGGCGCC 61.927 60.000 22.73 22.73 0.00 6.53
109 110 0.955428 TCTTCAATGTGGAGTGGCGC 60.955 55.000 0.00 0.00 0.00 6.53
110 111 1.399440 CATCTTCAATGTGGAGTGGCG 59.601 52.381 0.00 0.00 0.00 5.69
111 112 1.747355 CCATCTTCAATGTGGAGTGGC 59.253 52.381 0.00 0.00 34.94 5.01
112 113 1.747355 GCCATCTTCAATGTGGAGTGG 59.253 52.381 0.00 0.00 34.94 4.00
113 114 2.681848 GAGCCATCTTCAATGTGGAGTG 59.318 50.000 0.00 0.00 34.94 3.51
114 115 2.306805 TGAGCCATCTTCAATGTGGAGT 59.693 45.455 0.00 0.00 34.94 3.85
115 116 2.943690 CTGAGCCATCTTCAATGTGGAG 59.056 50.000 0.00 0.00 34.94 3.86
116 117 2.356432 CCTGAGCCATCTTCAATGTGGA 60.356 50.000 0.00 0.00 34.94 4.02
117 118 2.022195 CCTGAGCCATCTTCAATGTGG 58.978 52.381 0.00 0.00 36.09 4.17
118 119 2.022195 CCCTGAGCCATCTTCAATGTG 58.978 52.381 0.00 0.00 0.00 3.21
119 120 1.684248 GCCCTGAGCCATCTTCAATGT 60.684 52.381 0.00 0.00 34.35 2.71
120 121 1.030457 GCCCTGAGCCATCTTCAATG 58.970 55.000 0.00 0.00 34.35 2.82
121 122 0.465097 CGCCCTGAGCCATCTTCAAT 60.465 55.000 0.00 0.00 38.78 2.57
122 123 1.078214 CGCCCTGAGCCATCTTCAA 60.078 57.895 0.00 0.00 38.78 2.69
123 124 2.586245 CGCCCTGAGCCATCTTCA 59.414 61.111 0.00 0.00 38.78 3.02
124 125 2.049627 ATCCGCCCTGAGCCATCTTC 62.050 60.000 0.00 0.00 38.78 2.87
125 126 2.074948 ATCCGCCCTGAGCCATCTT 61.075 57.895 0.00 0.00 38.78 2.40
126 127 2.447379 ATCCGCCCTGAGCCATCT 60.447 61.111 0.00 0.00 38.78 2.90
127 128 2.281345 CATCCGCCCTGAGCCATC 60.281 66.667 0.00 0.00 38.78 3.51
128 129 4.575973 GCATCCGCCCTGAGCCAT 62.576 66.667 0.00 0.00 38.78 4.40
132 133 4.899239 GGTCGCATCCGCCCTGAG 62.899 72.222 0.00 0.00 33.11 3.35
134 135 4.899239 GAGGTCGCATCCGCCCTG 62.899 72.222 0.00 0.00 30.69 4.45
136 137 4.593864 GAGAGGTCGCATCCGCCC 62.594 72.222 0.00 0.00 33.15 6.13
137 138 3.838271 TGAGAGGTCGCATCCGCC 61.838 66.667 0.00 0.00 33.11 6.13
138 139 2.564553 AAGTGAGAGGTCGCATCCGC 62.565 60.000 0.00 0.00 35.46 5.54
139 140 0.108615 AAAGTGAGAGGTCGCATCCG 60.109 55.000 0.00 0.00 35.46 4.18
140 141 1.066858 TCAAAGTGAGAGGTCGCATCC 60.067 52.381 0.00 0.00 35.46 3.51
141 142 2.370281 TCAAAGTGAGAGGTCGCATC 57.630 50.000 0.00 0.00 35.46 3.91
142 143 2.037772 ACTTCAAAGTGAGAGGTCGCAT 59.962 45.455 0.00 0.00 37.98 4.73
143 144 1.412710 ACTTCAAAGTGAGAGGTCGCA 59.587 47.619 0.00 0.00 37.98 5.10
144 145 2.156343 ACTTCAAAGTGAGAGGTCGC 57.844 50.000 0.00 0.00 37.98 5.19
145 146 2.221981 GCAACTTCAAAGTGAGAGGTCG 59.778 50.000 0.00 0.00 39.66 4.79
146 147 2.221981 CGCAACTTCAAAGTGAGAGGTC 59.778 50.000 0.00 0.00 39.66 3.85
147 148 2.213499 CGCAACTTCAAAGTGAGAGGT 58.787 47.619 0.00 0.00 39.66 3.85
148 149 1.069636 GCGCAACTTCAAAGTGAGAGG 60.070 52.381 0.30 0.00 39.66 3.69
149 150 1.069636 GGCGCAACTTCAAAGTGAGAG 60.070 52.381 10.83 0.00 39.66 3.20
150 151 0.944386 GGCGCAACTTCAAAGTGAGA 59.056 50.000 10.83 0.00 39.66 3.27
151 152 0.947244 AGGCGCAACTTCAAAGTGAG 59.053 50.000 10.83 0.00 39.66 3.51
152 153 0.944386 GAGGCGCAACTTCAAAGTGA 59.056 50.000 10.83 0.00 39.66 3.41
153 154 0.384725 CGAGGCGCAACTTCAAAGTG 60.385 55.000 10.83 0.00 39.66 3.16
154 155 1.507141 CCGAGGCGCAACTTCAAAGT 61.507 55.000 10.83 0.00 42.04 2.66
155 156 1.207593 CCGAGGCGCAACTTCAAAG 59.792 57.895 10.83 0.00 0.00 2.77
156 157 1.503818 GACCGAGGCGCAACTTCAAA 61.504 55.000 10.83 0.00 0.00 2.69
157 158 1.959226 GACCGAGGCGCAACTTCAA 60.959 57.895 10.83 0.00 0.00 2.69
158 159 2.357034 GACCGAGGCGCAACTTCA 60.357 61.111 10.83 0.00 0.00 3.02
159 160 3.479269 CGACCGAGGCGCAACTTC 61.479 66.667 10.83 0.00 0.00 3.01
160 161 3.916392 CTCGACCGAGGCGCAACTT 62.916 63.158 10.83 0.00 38.51 2.66
161 162 4.421479 CTCGACCGAGGCGCAACT 62.421 66.667 10.83 0.00 38.51 3.16
169 170 2.182030 GTGGCTTCCTCGACCGAG 59.818 66.667 12.09 12.09 41.63 4.63
170 171 3.379445 GGTGGCTTCCTCGACCGA 61.379 66.667 0.00 0.00 0.00 4.69
171 172 3.382832 AGGTGGCTTCCTCGACCG 61.383 66.667 0.00 0.00 31.32 4.79
172 173 2.266055 CAGGTGGCTTCCTCGACC 59.734 66.667 0.00 0.00 35.37 4.79
173 174 1.374758 CACAGGTGGCTTCCTCGAC 60.375 63.158 0.00 0.00 35.37 4.20
174 175 1.533033 TCACAGGTGGCTTCCTCGA 60.533 57.895 0.00 0.00 35.37 4.04
175 176 1.374758 GTCACAGGTGGCTTCCTCG 60.375 63.158 0.00 0.00 35.37 4.63
176 177 1.374758 CGTCACAGGTGGCTTCCTC 60.375 63.158 2.26 0.00 35.37 3.71
177 178 2.743718 CGTCACAGGTGGCTTCCT 59.256 61.111 2.26 0.00 38.51 3.36
178 179 3.050275 GCGTCACAGGTGGCTTCC 61.050 66.667 2.26 0.00 31.96 3.46
179 180 3.414700 CGCGTCACAGGTGGCTTC 61.415 66.667 0.00 0.00 31.96 3.86
180 181 4.235762 ACGCGTCACAGGTGGCTT 62.236 61.111 5.58 0.00 31.96 4.35
181 182 4.664677 GACGCGTCACAGGTGGCT 62.665 66.667 33.09 0.00 31.96 4.75
182 183 4.664677 AGACGCGTCACAGGTGGC 62.665 66.667 37.85 11.37 0.00 5.01
183 184 2.430921 GAGACGCGTCACAGGTGG 60.431 66.667 37.85 0.00 0.00 4.61
184 185 2.430921 GGAGACGCGTCACAGGTG 60.431 66.667 37.85 0.00 0.00 4.00
196 197 0.109226 GCACTGTAGACACCGGAGAC 60.109 60.000 9.46 0.00 0.00 3.36
197 198 1.248785 GGCACTGTAGACACCGGAGA 61.249 60.000 9.46 0.00 0.00 3.71
198 199 1.215647 GGCACTGTAGACACCGGAG 59.784 63.158 9.46 1.26 0.00 4.63
199 200 2.632544 CGGCACTGTAGACACCGGA 61.633 63.158 9.46 0.00 40.18 5.14
200 201 2.126071 CGGCACTGTAGACACCGG 60.126 66.667 0.00 0.00 40.18 5.28
202 203 1.080025 GGACGGCACTGTAGACACC 60.080 63.158 0.00 0.00 0.00 4.16
203 204 1.443872 CGGACGGCACTGTAGACAC 60.444 63.158 0.00 0.00 0.00 3.67
204 205 2.959372 CGGACGGCACTGTAGACA 59.041 61.111 0.00 0.00 0.00 3.41
285 286 1.303799 CGCAGCTGGCATTGTTCTCT 61.304 55.000 17.12 0.00 45.17 3.10
323 325 2.908015 GGGCCGCCTGATAGTTCA 59.092 61.111 9.86 0.00 0.00 3.18
384 387 0.460109 CATCGCCGGTGAACATGAGA 60.460 55.000 23.72 0.00 0.00 3.27
392 395 0.672401 GACTTTTCCATCGCCGGTGA 60.672 55.000 22.04 22.04 0.00 4.02
406 409 0.605589 CAGGAGGAGTCTGCGACTTT 59.394 55.000 11.54 5.02 43.53 2.66
424 430 2.063979 CCGTGGCCTACTCATCCCA 61.064 63.158 3.32 0.00 0.00 4.37
425 431 2.808206 CCCGTGGCCTACTCATCCC 61.808 68.421 3.32 0.00 0.00 3.85
472 478 2.408565 AGAACATGGATATGGACCGGT 58.591 47.619 6.92 6.92 38.66 5.28
482 488 3.068873 GCGAGGAAGAGTAGAACATGGAT 59.931 47.826 0.00 0.00 0.00 3.41
551 566 2.172293 GTCATCCTCCATCTGCCTTCTT 59.828 50.000 0.00 0.00 0.00 2.52
555 570 1.420514 CATGTCATCCTCCATCTGCCT 59.579 52.381 0.00 0.00 0.00 4.75
598 613 3.570540 GACCCTAAACCTATCCTACGGT 58.429 50.000 0.00 0.00 34.27 4.83
648 682 2.933906 TCATAGAAACACGGCGGATTTC 59.066 45.455 22.77 22.77 33.40 2.17
697 731 4.484236 GGATGAAATTCATGCAAACACGA 58.516 39.130 20.18 0.00 43.55 4.35
800 834 2.858839 CGCACCCGTAAATTTCTTTCC 58.141 47.619 0.00 0.00 0.00 3.13
802 836 1.400500 CGCGCACCCGTAAATTTCTTT 60.400 47.619 8.75 0.00 36.67 2.52
804 838 0.952010 ACGCGCACCCGTAAATTTCT 60.952 50.000 5.73 0.00 40.08 2.52
818 852 3.733344 TAGGGCATCTCCAACGCGC 62.733 63.158 5.73 0.00 38.75 6.86
819 853 1.153449 TTAGGGCATCTCCAACGCG 60.153 57.895 3.53 3.53 36.21 6.01
820 854 1.429148 CGTTAGGGCATCTCCAACGC 61.429 60.000 0.00 0.00 35.92 4.84
847 881 9.869757 GCTATTTTACATGTACCTGGAATTTTT 57.130 29.630 4.68 0.00 0.00 1.94
848 882 9.030452 TGCTATTTTACATGTACCTGGAATTTT 57.970 29.630 4.68 0.00 0.00 1.82
849 883 8.588290 TGCTATTTTACATGTACCTGGAATTT 57.412 30.769 4.68 0.00 0.00 1.82
850 884 8.588290 TTGCTATTTTACATGTACCTGGAATT 57.412 30.769 4.68 0.00 0.00 2.17
851 885 8.588290 TTTGCTATTTTACATGTACCTGGAAT 57.412 30.769 4.68 4.38 0.00 3.01
852 886 8.301002 GTTTTGCTATTTTACATGTACCTGGAA 58.699 33.333 4.68 0.00 0.00 3.53
853 887 7.094118 GGTTTTGCTATTTTACATGTACCTGGA 60.094 37.037 4.68 0.00 0.00 3.86
854 888 7.033185 GGTTTTGCTATTTTACATGTACCTGG 58.967 38.462 4.68 0.00 0.00 4.45
855 889 7.033185 GGGTTTTGCTATTTTACATGTACCTG 58.967 38.462 4.68 0.00 0.00 4.00
856 890 6.951778 AGGGTTTTGCTATTTTACATGTACCT 59.048 34.615 4.68 1.08 0.00 3.08
857 891 7.165460 AGGGTTTTGCTATTTTACATGTACC 57.835 36.000 4.68 1.08 0.00 3.34
858 892 8.301002 TCAAGGGTTTTGCTATTTTACATGTAC 58.699 33.333 4.68 0.00 0.00 2.90
859 893 8.410673 TCAAGGGTTTTGCTATTTTACATGTA 57.589 30.769 0.08 0.08 0.00 2.29
860 894 7.296628 TCAAGGGTTTTGCTATTTTACATGT 57.703 32.000 2.69 2.69 0.00 3.21
869 903 9.454859 GCTCTTATATATCAAGGGTTTTGCTAT 57.545 33.333 0.00 0.00 0.00 2.97
870 904 8.436778 TGCTCTTATATATCAAGGGTTTTGCTA 58.563 33.333 0.00 0.00 0.00 3.49
871 905 7.290061 TGCTCTTATATATCAAGGGTTTTGCT 58.710 34.615 0.00 0.00 0.00 3.91
872 906 7.510549 TGCTCTTATATATCAAGGGTTTTGC 57.489 36.000 0.00 0.00 0.00 3.68
873 907 9.125026 ACTTGCTCTTATATATCAAGGGTTTTG 57.875 33.333 12.98 0.00 38.64 2.44
875 909 9.780186 GTACTTGCTCTTATATATCAAGGGTTT 57.220 33.333 12.98 0.00 38.64 3.27
876 910 8.376270 GGTACTTGCTCTTATATATCAAGGGTT 58.624 37.037 12.98 0.00 38.64 4.11
877 911 7.512746 TGGTACTTGCTCTTATATATCAAGGGT 59.487 37.037 12.98 1.07 38.64 4.34
878 912 7.819900 GTGGTACTTGCTCTTATATATCAAGGG 59.180 40.741 12.98 6.71 38.64 3.95
879 913 8.367911 TGTGGTACTTGCTCTTATATATCAAGG 58.632 37.037 12.98 3.13 38.64 3.61
880 914 9.197694 GTGTGGTACTTGCTCTTATATATCAAG 57.802 37.037 8.73 8.73 39.79 3.02
881 915 8.924303 AGTGTGGTACTTGCTCTTATATATCAA 58.076 33.333 0.00 0.00 35.67 2.57
882 916 8.478775 AGTGTGGTACTTGCTCTTATATATCA 57.521 34.615 0.00 0.00 35.67 2.15
883 917 9.843334 GTAGTGTGGTACTTGCTCTTATATATC 57.157 37.037 0.00 0.00 40.89 1.63
884 918 8.804204 GGTAGTGTGGTACTTGCTCTTATATAT 58.196 37.037 0.00 0.00 40.89 0.86
897 931 1.982226 TGGCAATGGTAGTGTGGTACT 59.018 47.619 0.00 0.00 43.56 2.73
912 946 0.110295 TTAGCAAGCTCAGGTGGCAA 59.890 50.000 5.89 0.00 0.00 4.52
927 961 0.371645 GTGCACGACTCAGCATTAGC 59.628 55.000 0.00 0.00 43.44 3.09
928 962 1.002366 GGTGCACGACTCAGCATTAG 58.998 55.000 11.45 0.00 43.44 1.73
929 963 0.391130 GGGTGCACGACTCAGCATTA 60.391 55.000 11.45 0.00 43.44 1.90
954 990 2.224281 TGATATCACGGGAGCATGGTTC 60.224 50.000 0.00 0.00 0.00 3.62
971 1007 0.671796 CGGCCACTACGGTGATGATA 59.328 55.000 2.24 0.00 45.61 2.15
1071 1107 2.143122 CGGAACATCGGGTTGATATGG 58.857 52.381 0.00 0.00 40.63 2.74
1176 1212 2.493501 GGGACGAAGCGGTACTCC 59.506 66.667 0.00 0.00 0.00 3.85
1309 1345 2.753247 GTCCCTGGAGTACTCTTCCAT 58.247 52.381 21.88 0.00 32.54 3.41
1375 1411 2.032681 GAGCTTCGTGGCCACCTT 59.967 61.111 29.95 10.92 0.00 3.50
1449 1485 0.105453 TGATGAGGAGAGGGTAGGCC 60.105 60.000 0.00 0.00 0.00 5.19
1512 1548 3.772572 TCCATCGGTCCAAGAGATAAACA 59.227 43.478 0.00 0.00 0.00 2.83
1527 1563 0.324943 AACAAGGGTCAGTCCATCGG 59.675 55.000 0.00 0.00 38.11 4.18
1532 1568 1.338020 CAAGCAAACAAGGGTCAGTCC 59.662 52.381 0.00 0.00 0.00 3.85
1543 1579 0.179059 TCCGACTCTGCAAGCAAACA 60.179 50.000 0.00 0.00 0.00 2.83
1549 1585 1.447489 CCAGCTCCGACTCTGCAAG 60.447 63.158 0.00 0.00 0.00 4.01
1695 1731 1.545614 GCGCGTCGAAAGTGTTGAGA 61.546 55.000 8.43 0.00 0.00 3.27
1869 1905 3.667282 ACGTACAGCACCGACGCT 61.667 61.111 0.00 0.00 45.21 5.07
1896 1932 2.202743 GACATGCACGCGAGGCTA 60.203 61.111 15.93 7.56 0.00 3.93
1965 2001 2.660064 CCGGACCACCCAGAGGAAG 61.660 68.421 0.00 0.00 36.73 3.46
2019 2055 4.349503 TCCTCGAACCCGTCCGGA 62.350 66.667 0.00 0.00 37.50 5.14
2160 2196 2.361610 CAAAGCATCGGCACCCCT 60.362 61.111 0.00 0.00 44.61 4.79
2354 2511 4.680237 CGGTGCACTCCTTCGCCA 62.680 66.667 17.98 0.00 33.28 5.69
2490 2653 3.243068 CCGTTGAAGACAGTGAAAAAGGG 60.243 47.826 0.00 0.00 0.00 3.95
2492 2655 4.142687 ACACCGTTGAAGACAGTGAAAAAG 60.143 41.667 0.00 0.00 0.00 2.27
2504 2667 2.821546 TCTGAACTGACACCGTTGAAG 58.178 47.619 0.00 0.00 0.00 3.02
2522 2685 8.251721 AGTACGTGCTTAATTAACAGAGATTCT 58.748 33.333 0.00 0.00 0.00 2.40
2541 2704 5.164012 CGGAGGAAGTATATCGTAGTACGTG 60.164 48.000 21.38 0.00 43.14 4.49
2544 2707 5.350091 GGACGGAGGAAGTATATCGTAGTAC 59.650 48.000 0.00 0.00 0.00 2.73
2545 2708 5.482908 GGACGGAGGAAGTATATCGTAGTA 58.517 45.833 0.00 0.00 0.00 1.82
2546 2709 4.322567 GGACGGAGGAAGTATATCGTAGT 58.677 47.826 0.00 0.00 0.00 2.73
2547 2710 3.688673 GGGACGGAGGAAGTATATCGTAG 59.311 52.174 0.00 0.00 0.00 3.51
2548 2711 3.679389 GGGACGGAGGAAGTATATCGTA 58.321 50.000 0.00 0.00 0.00 3.43
2549 2712 2.512705 GGGACGGAGGAAGTATATCGT 58.487 52.381 0.00 0.00 0.00 3.73
2607 2816 7.874528 CCCCGTCCTATAATATAAGACGTTTTT 59.125 37.037 22.33 0.00 46.62 1.94
2611 2820 5.819991 TCCCCGTCCTATAATATAAGACGT 58.180 41.667 22.33 0.00 46.62 4.34
2613 2822 8.052141 AGTACTCCCCGTCCTATAATATAAGAC 58.948 40.741 0.00 0.12 0.00 3.01
2623 2832 8.397172 ACTTATAAATAGTACTCCCCGTCCTAT 58.603 37.037 0.00 0.00 0.00 2.57
2624 2833 7.759607 ACTTATAAATAGTACTCCCCGTCCTA 58.240 38.462 0.00 0.00 0.00 2.94
2626 2835 6.491403 TGACTTATAAATAGTACTCCCCGTCC 59.509 42.308 0.00 0.00 0.00 4.79
2627 2836 7.230309 ACTGACTTATAAATAGTACTCCCCGTC 59.770 40.741 0.00 0.00 0.00 4.79
2628 2837 7.065504 ACTGACTTATAAATAGTACTCCCCGT 58.934 38.462 0.00 0.00 0.00 5.28
2634 2843 9.939424 AGGGAAGACTGACTTATAAATAGTACT 57.061 33.333 0.00 0.00 39.13 2.73
2637 2846 9.892130 CAAAGGGAAGACTGACTTATAAATAGT 57.108 33.333 0.00 0.00 39.13 2.12
2664 2873 6.839124 TCCTTGCAATTTACACATGAGAAT 57.161 33.333 0.00 0.00 0.00 2.40
2681 2890 4.447389 ACACAAATGCGTAAATTTCCTTGC 59.553 37.500 0.00 0.00 0.00 4.01
2878 3093 3.400505 CGAGTCTTCGTACAGCATGTA 57.599 47.619 0.00 0.00 44.99 2.29
2879 3094 2.264109 CGAGTCTTCGTACAGCATGT 57.736 50.000 0.00 0.00 45.52 3.21
2923 3138 4.471904 TTGAATCGACTGCCATCTAGTT 57.528 40.909 0.00 0.00 0.00 2.24
2952 3170 5.771469 TGGCATCACAAAACACAGAAATAG 58.229 37.500 0.00 0.00 0.00 1.73
2973 3191 1.679680 GGAAGTGTGGATCATGCATGG 59.320 52.381 25.97 8.24 0.00 3.66
3016 3234 6.929587 GCATTAAGCATCATGAATAGCTTG 57.070 37.500 28.84 20.12 45.91 4.01
3052 3283 6.100792 TCAAAATCGCCAAACTTTTGAAAC 57.899 33.333 3.17 0.00 42.65 2.78
3053 3284 5.220567 GCTCAAAATCGCCAAACTTTTGAAA 60.221 36.000 3.17 0.00 44.04 2.69
3061 3292 2.422276 ACTGCTCAAAATCGCCAAAC 57.578 45.000 0.00 0.00 0.00 2.93
3086 3317 8.499162 CCAGTCTGAAATTTTGATACCGATATC 58.501 37.037 0.00 0.00 38.18 1.63
3175 3414 9.971744 GCAAATATTCGCAAACTTCAAATTTAT 57.028 25.926 0.00 0.00 0.00 1.40
3176 3415 8.439286 GGCAAATATTCGCAAACTTCAAATTTA 58.561 29.630 0.00 0.00 0.00 1.40
3191 3430 3.546815 CCGAGCAGAAAGGCAAATATTCG 60.547 47.826 0.00 0.00 35.83 3.34
3204 3443 1.272490 CTAGTTGTGACCCGAGCAGAA 59.728 52.381 0.00 0.00 0.00 3.02
3209 3448 3.181489 GGTATGACTAGTTGTGACCCGAG 60.181 52.174 0.00 0.00 0.00 4.63
3210 3449 2.756760 GGTATGACTAGTTGTGACCCGA 59.243 50.000 0.00 0.00 0.00 5.14
3211 3450 2.758979 AGGTATGACTAGTTGTGACCCG 59.241 50.000 0.00 0.00 0.00 5.28
3212 3451 4.820894 AAGGTATGACTAGTTGTGACCC 57.179 45.455 0.00 0.00 0.00 4.46
3213 3452 5.176592 GGAAAGGTATGACTAGTTGTGACC 58.823 45.833 0.00 3.03 0.00 4.02
3214 3453 5.790593 TGGAAAGGTATGACTAGTTGTGAC 58.209 41.667 0.00 0.00 0.00 3.67
3215 3454 6.212589 TCATGGAAAGGTATGACTAGTTGTGA 59.787 38.462 0.00 0.00 0.00 3.58
3216 3455 6.406370 TCATGGAAAGGTATGACTAGTTGTG 58.594 40.000 0.00 0.00 0.00 3.33
3217 3456 6.620877 TCATGGAAAGGTATGACTAGTTGT 57.379 37.500 0.00 0.00 0.00 3.32
3218 3457 7.921786 TTTCATGGAAAGGTATGACTAGTTG 57.078 36.000 0.00 0.00 33.36 3.16
3219 3458 8.934023 TTTTTCATGGAAAGGTATGACTAGTT 57.066 30.769 0.00 0.00 33.36 2.24
3244 3483 9.454859 TCAAGTTTTCAAAAATTAACCCATGTT 57.545 25.926 0.00 0.00 38.52 2.71
3245 3484 9.108284 CTCAAGTTTTCAAAAATTAACCCATGT 57.892 29.630 0.00 0.00 0.00 3.21
3246 3485 8.558700 CCTCAAGTTTTCAAAAATTAACCCATG 58.441 33.333 0.00 0.00 0.00 3.66
3247 3486 7.719193 CCCTCAAGTTTTCAAAAATTAACCCAT 59.281 33.333 0.00 0.00 0.00 4.00
3248 3487 7.051000 CCCTCAAGTTTTCAAAAATTAACCCA 58.949 34.615 0.00 0.00 0.00 4.51
3249 3488 7.051623 ACCCTCAAGTTTTCAAAAATTAACCC 58.948 34.615 0.00 0.00 0.00 4.11
3250 3489 9.602568 TTACCCTCAAGTTTTCAAAAATTAACC 57.397 29.630 0.00 0.00 0.00 2.85
3254 3493 7.704899 CGTCTTACCCTCAAGTTTTCAAAAATT 59.295 33.333 0.00 0.00 0.00 1.82
3255 3494 7.067737 TCGTCTTACCCTCAAGTTTTCAAAAAT 59.932 33.333 0.00 0.00 0.00 1.82
3256 3495 6.374894 TCGTCTTACCCTCAAGTTTTCAAAAA 59.625 34.615 0.00 0.00 0.00 1.94
3257 3496 5.881443 TCGTCTTACCCTCAAGTTTTCAAAA 59.119 36.000 0.00 0.00 0.00 2.44
3258 3497 5.295045 GTCGTCTTACCCTCAAGTTTTCAAA 59.705 40.000 0.00 0.00 0.00 2.69
3259 3498 4.812626 GTCGTCTTACCCTCAAGTTTTCAA 59.187 41.667 0.00 0.00 0.00 2.69
3260 3499 4.374399 GTCGTCTTACCCTCAAGTTTTCA 58.626 43.478 0.00 0.00 0.00 2.69
3261 3500 3.427863 CGTCGTCTTACCCTCAAGTTTTC 59.572 47.826 0.00 0.00 0.00 2.29
3262 3501 3.387397 CGTCGTCTTACCCTCAAGTTTT 58.613 45.455 0.00 0.00 0.00 2.43
3263 3502 2.865276 GCGTCGTCTTACCCTCAAGTTT 60.865 50.000 0.00 0.00 0.00 2.66
3264 3503 1.336609 GCGTCGTCTTACCCTCAAGTT 60.337 52.381 0.00 0.00 0.00 2.66
3265 3504 0.243095 GCGTCGTCTTACCCTCAAGT 59.757 55.000 0.00 0.00 0.00 3.16
3266 3505 0.526662 AGCGTCGTCTTACCCTCAAG 59.473 55.000 0.00 0.00 0.00 3.02
3267 3506 0.524862 GAGCGTCGTCTTACCCTCAA 59.475 55.000 0.00 0.00 0.00 3.02
3268 3507 0.322277 AGAGCGTCGTCTTACCCTCA 60.322 55.000 0.00 0.00 28.55 3.86
3269 3508 0.810016 AAGAGCGTCGTCTTACCCTC 59.190 55.000 7.89 0.00 34.90 4.30
3270 3509 0.810016 GAAGAGCGTCGTCTTACCCT 59.190 55.000 9.18 0.00 36.89 4.34
3271 3510 0.524862 TGAAGAGCGTCGTCTTACCC 59.475 55.000 9.18 1.23 36.89 3.69
3272 3511 1.467713 CCTGAAGAGCGTCGTCTTACC 60.468 57.143 9.18 1.75 36.89 2.85
3273 3512 1.467713 CCCTGAAGAGCGTCGTCTTAC 60.468 57.143 9.18 5.62 36.89 2.34
3274 3513 0.809385 CCCTGAAGAGCGTCGTCTTA 59.191 55.000 9.18 1.18 36.89 2.10
3275 3514 1.179814 ACCCTGAAGAGCGTCGTCTT 61.180 55.000 9.02 9.02 39.59 3.01
3276 3515 1.179814 AACCCTGAAGAGCGTCGTCT 61.180 55.000 0.00 0.00 0.00 4.18
3277 3516 0.319641 AAACCCTGAAGAGCGTCGTC 60.320 55.000 0.00 0.00 0.00 4.20
3278 3517 0.106149 AAAACCCTGAAGAGCGTCGT 59.894 50.000 0.00 0.00 0.00 4.34
3279 3518 1.226746 AAAAACCCTGAAGAGCGTCG 58.773 50.000 0.00 0.00 0.00 5.12
3299 3538 9.712305 TCTACCACAAAAATTCTTTGAACAAAA 57.288 25.926 15.45 0.00 33.83 2.44
3300 3539 9.883142 ATCTACCACAAAAATTCTTTGAACAAA 57.117 25.926 15.45 0.17 33.83 2.83
3301 3540 9.883142 AATCTACCACAAAAATTCTTTGAACAA 57.117 25.926 15.45 0.00 33.83 2.83
3302 3541 9.883142 AAATCTACCACAAAAATTCTTTGAACA 57.117 25.926 15.45 0.00 33.83 3.18
3311 3550 9.942850 CCAATCCTTAAATCTACCACAAAAATT 57.057 29.630 0.00 0.00 0.00 1.82
3312 3551 9.320295 TCCAATCCTTAAATCTACCACAAAAAT 57.680 29.630 0.00 0.00 0.00 1.82
3313 3552 8.713708 TCCAATCCTTAAATCTACCACAAAAA 57.286 30.769 0.00 0.00 0.00 1.94
3314 3553 8.713708 TTCCAATCCTTAAATCTACCACAAAA 57.286 30.769 0.00 0.00 0.00 2.44
3315 3554 8.893563 ATTCCAATCCTTAAATCTACCACAAA 57.106 30.769 0.00 0.00 0.00 2.83
3316 3555 8.519799 GATTCCAATCCTTAAATCTACCACAA 57.480 34.615 0.00 0.00 0.00 3.33
3332 3571 8.552083 AGCAAAAATTAACAAGGATTCCAATC 57.448 30.769 5.29 0.00 34.66 2.67
3333 3572 9.435688 GTAGCAAAAATTAACAAGGATTCCAAT 57.564 29.630 5.29 0.00 0.00 3.16
3334 3573 7.596995 CGTAGCAAAAATTAACAAGGATTCCAA 59.403 33.333 5.29 0.00 0.00 3.53
3335 3574 7.087639 CGTAGCAAAAATTAACAAGGATTCCA 58.912 34.615 5.29 0.00 0.00 3.53
3336 3575 7.088272 ACGTAGCAAAAATTAACAAGGATTCC 58.912 34.615 0.00 0.00 0.00 3.01
3337 3576 7.007099 CGACGTAGCAAAAATTAACAAGGATTC 59.993 37.037 0.00 0.00 0.00 2.52
3338 3577 6.799925 CGACGTAGCAAAAATTAACAAGGATT 59.200 34.615 0.00 0.00 0.00 3.01
3339 3578 6.311723 CGACGTAGCAAAAATTAACAAGGAT 58.688 36.000 0.00 0.00 0.00 3.24
3340 3579 5.334260 CCGACGTAGCAAAAATTAACAAGGA 60.334 40.000 0.00 0.00 0.00 3.36
3341 3580 4.849383 CCGACGTAGCAAAAATTAACAAGG 59.151 41.667 0.00 0.00 0.00 3.61
3342 3581 5.445845 ACCGACGTAGCAAAAATTAACAAG 58.554 37.500 0.00 0.00 0.00 3.16
3343 3582 5.421212 ACCGACGTAGCAAAAATTAACAA 57.579 34.783 0.00 0.00 0.00 2.83
3344 3583 5.206299 CAACCGACGTAGCAAAAATTAACA 58.794 37.500 0.00 0.00 0.00 2.41
3345 3584 5.207033 ACAACCGACGTAGCAAAAATTAAC 58.793 37.500 0.00 0.00 0.00 2.01
3346 3585 5.421212 ACAACCGACGTAGCAAAAATTAA 57.579 34.783 0.00 0.00 0.00 1.40
3347 3586 5.421212 AACAACCGACGTAGCAAAAATTA 57.579 34.783 0.00 0.00 0.00 1.40
3348 3587 3.974871 ACAACCGACGTAGCAAAAATT 57.025 38.095 0.00 0.00 0.00 1.82
3349 3588 3.974871 AACAACCGACGTAGCAAAAAT 57.025 38.095 0.00 0.00 0.00 1.82
3350 3589 3.126514 TCAAACAACCGACGTAGCAAAAA 59.873 39.130 0.00 0.00 0.00 1.94
3351 3590 2.676839 TCAAACAACCGACGTAGCAAAA 59.323 40.909 0.00 0.00 0.00 2.44
3352 3591 2.277969 TCAAACAACCGACGTAGCAAA 58.722 42.857 0.00 0.00 0.00 3.68
3353 3592 1.937278 TCAAACAACCGACGTAGCAA 58.063 45.000 0.00 0.00 0.00 3.91
3354 3593 2.157834 ATCAAACAACCGACGTAGCA 57.842 45.000 0.00 0.00 0.00 3.49
3355 3594 2.471749 CGAATCAAACAACCGACGTAGC 60.472 50.000 0.00 0.00 0.00 3.58
3356 3595 2.727798 ACGAATCAAACAACCGACGTAG 59.272 45.455 0.00 0.00 0.00 3.51
3357 3596 2.741612 ACGAATCAAACAACCGACGTA 58.258 42.857 0.00 0.00 0.00 3.57
3358 3597 1.574134 ACGAATCAAACAACCGACGT 58.426 45.000 0.00 0.00 0.00 4.34
3359 3598 3.365520 TCATACGAATCAAACAACCGACG 59.634 43.478 0.00 0.00 0.00 5.12
3360 3599 4.435121 GGTCATACGAATCAAACAACCGAC 60.435 45.833 0.00 0.00 0.00 4.79
3361 3600 3.680937 GGTCATACGAATCAAACAACCGA 59.319 43.478 0.00 0.00 0.00 4.69
3362 3601 3.482923 CGGTCATACGAATCAAACAACCG 60.483 47.826 0.00 0.00 40.80 4.44
3363 3602 3.680937 TCGGTCATACGAATCAAACAACC 59.319 43.478 0.00 0.00 40.34 3.77
3364 3603 4.914312 TCGGTCATACGAATCAAACAAC 57.086 40.909 0.00 0.00 40.34 3.32
3374 3613 6.829229 AATATGTAGGATTCGGTCATACGA 57.171 37.500 0.00 0.00 44.85 3.43
3375 3614 7.884816 AAAATATGTAGGATTCGGTCATACG 57.115 36.000 8.32 0.00 44.85 3.06
3407 3646 5.774690 TGAAATGTAGTGCAAAGGGATCTTT 59.225 36.000 0.00 0.00 43.41 2.52
3408 3647 5.324409 TGAAATGTAGTGCAAAGGGATCTT 58.676 37.500 0.00 0.00 34.07 2.40
3409 3648 4.922206 TGAAATGTAGTGCAAAGGGATCT 58.078 39.130 0.00 0.00 0.00 2.75
3410 3649 5.841957 ATGAAATGTAGTGCAAAGGGATC 57.158 39.130 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.