Multiple sequence alignment - TraesCS5A01G485100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G485100 chr5A 100.000 4048 0 0 1 4048 656465727 656469774 0.000000e+00 7476.0
1 TraesCS5A01G485100 chr5A 86.089 496 52 11 3525 4006 656652392 656652884 6.000000e-143 518.0
2 TraesCS5A01G485100 chr5A 84.755 387 54 5 32 414 269283592 269283207 2.280000e-102 383.0
3 TraesCS5A01G485100 chr5A 79.919 493 81 11 29 519 677868276 677868752 2.990000e-91 346.0
4 TraesCS5A01G485100 chr5A 88.265 196 18 4 1140 1332 383883183 383882990 3.150000e-56 230.0
5 TraesCS5A01G485100 chr5A 93.023 43 2 1 1998 2039 535620132 535620174 1.210000e-05 62.1
6 TraesCS5A01G485100 chr5B 92.963 1961 80 31 2123 4048 665207930 665205993 0.000000e+00 2804.0
7 TraesCS5A01G485100 chr5B 90.218 1421 66 35 705 2123 665209228 665207879 0.000000e+00 1786.0
8 TraesCS5A01G485100 chr5B 93.023 43 2 1 1998 2039 508873584 508873626 1.210000e-05 62.1
9 TraesCS5A01G485100 chr5D 90.631 1964 89 32 2123 4048 528402857 528404763 0.000000e+00 2519.0
10 TraesCS5A01G485100 chr5D 90.623 1397 71 29 732 2123 528401567 528402908 0.000000e+00 1799.0
11 TraesCS5A01G485100 chr5D 82.892 491 74 8 32 519 472747571 472747088 2.230000e-117 433.0
12 TraesCS5A01G485100 chr5D 87.879 330 29 8 3728 4048 528555711 528556038 1.060000e-100 377.0
13 TraesCS5A01G485100 chr5D 82.759 261 16 6 1067 1327 28561541 28561772 5.300000e-49 206.0
14 TraesCS5A01G485100 chr5D 84.236 203 13 4 2727 2926 528417125 528417311 3.210000e-41 180.0
15 TraesCS5A01G485100 chr1B 83.503 491 71 10 34 519 388778946 388778461 2.220000e-122 449.0
16 TraesCS5A01G485100 chr1D 82.863 496 78 6 34 524 130295874 130295381 4.800000e-119 438.0
17 TraesCS5A01G485100 chr1D 94.000 50 3 0 2044 2093 420648996 420648947 4.340000e-10 76.8
18 TraesCS5A01G485100 chr7B 83.117 385 49 12 1 372 417787611 417787992 1.800000e-88 337.0
19 TraesCS5A01G485100 chr7B 93.168 161 11 0 1172 1332 501508512 501508672 1.880000e-58 237.0
20 TraesCS5A01G485100 chr7B 90.244 82 7 1 2007 2088 618503328 618503248 5.530000e-19 106.0
21 TraesCS5A01G485100 chr3D 79.074 497 93 11 32 523 118224639 118224149 8.390000e-87 331.0
22 TraesCS5A01G485100 chr3D 98.802 167 2 0 1165 1331 470731430 470731264 8.510000e-77 298.0
23 TraesCS5A01G485100 chr3D 81.923 260 18 14 1068 1327 542666103 542665873 4.130000e-45 193.0
24 TraesCS5A01G485100 chr6B 79.435 496 79 21 29 517 483624318 483624797 3.020000e-86 329.0
25 TraesCS5A01G485100 chr3B 97.283 184 2 3 1165 1346 625202701 625202519 3.930000e-80 309.0
26 TraesCS5A01G485100 chr3A 99.401 167 1 0 1165 1331 612987282 612987116 1.830000e-78 303.0
27 TraesCS5A01G485100 chr2D 78.846 468 81 16 65 524 86017575 86017118 2.360000e-77 300.0
28 TraesCS5A01G485100 chr7D 93.168 161 11 0 1172 1332 477072303 477072463 1.880000e-58 237.0
29 TraesCS5A01G485100 chr7A 93.168 161 11 0 1172 1332 518809678 518809518 1.880000e-58 237.0
30 TraesCS5A01G485100 chrUn 88.506 87 8 1 2001 2085 211065294 211065380 1.990000e-18 104.0
31 TraesCS5A01G485100 chrUn 86.207 87 10 1 2001 2085 263492204 263492290 4.310000e-15 93.5
32 TraesCS5A01G485100 chrUn 100.000 30 0 0 2010 2039 30028802 30028773 5.650000e-04 56.5
33 TraesCS5A01G485100 chr6D 87.342 79 8 1 2010 2088 309043934 309043858 5.570000e-14 89.8
34 TraesCS5A01G485100 chr2B 78.151 119 25 1 372 489 146771048 146771166 1.560000e-09 75.0
35 TraesCS5A01G485100 chr2A 100.000 30 0 0 2010 2039 25044312 25044283 5.650000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G485100 chr5A 656465727 656469774 4047 False 7476 7476 100.0000 1 4048 1 chr5A.!!$F2 4047
1 TraesCS5A01G485100 chr5B 665205993 665209228 3235 True 2295 2804 91.5905 705 4048 2 chr5B.!!$R1 3343
2 TraesCS5A01G485100 chr5D 528401567 528404763 3196 False 2159 2519 90.6270 732 4048 2 chr5D.!!$F4 3316

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 454 0.038166 AATGGACACCGCCTCATTGT 59.962 50.0 0.0 0.0 0.0 2.71 F
703 704 0.335019 GTTCCCTGGCCCCAAATAGT 59.665 55.0 0.0 0.0 0.0 2.12 F
1617 1626 0.659957 CGCAGAGAAATGGGCTAAGC 59.340 55.0 0.0 0.0 0.0 3.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1350 1358 0.591659 TAGATCGTGATCGCGGGAAG 59.408 55.0 26.94 0.14 42.48 3.46 R
1856 1866 0.597568 TCAAATTCAAGTGCCAGCGG 59.402 50.0 0.00 0.00 0.00 5.52 R
3493 3557 0.392461 TGCTGCTGTTCCGGTAATCC 60.392 55.0 0.00 0.00 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.761896 TTGTGTGGGATGGATGCAA 57.238 47.368 0.00 0.00 0.00 4.08
19 20 2.234896 TTGTGTGGGATGGATGCAAT 57.765 45.000 0.00 0.00 0.00 3.56
20 21 2.234896 TGTGTGGGATGGATGCAATT 57.765 45.000 0.00 0.00 0.00 2.32
21 22 2.538222 TGTGTGGGATGGATGCAATTT 58.462 42.857 0.00 0.00 0.00 1.82
22 23 2.905085 TGTGTGGGATGGATGCAATTTT 59.095 40.909 0.00 0.00 0.00 1.82
23 24 3.327172 TGTGTGGGATGGATGCAATTTTT 59.673 39.130 0.00 0.00 0.00 1.94
24 25 3.685756 GTGTGGGATGGATGCAATTTTTG 59.314 43.478 0.00 0.00 0.00 2.44
25 26 3.272581 GTGGGATGGATGCAATTTTTGG 58.727 45.455 0.00 0.00 0.00 3.28
26 27 2.911636 TGGGATGGATGCAATTTTTGGT 59.088 40.909 0.00 0.00 0.00 3.67
27 28 3.272581 GGGATGGATGCAATTTTTGGTG 58.727 45.455 0.00 0.00 0.00 4.17
28 29 3.307621 GGGATGGATGCAATTTTTGGTGT 60.308 43.478 0.00 0.00 0.00 4.16
29 30 3.934579 GGATGGATGCAATTTTTGGTGTC 59.065 43.478 0.00 0.00 0.00 3.67
30 31 3.399440 TGGATGCAATTTTTGGTGTCC 57.601 42.857 0.00 0.00 0.00 4.02
31 32 2.702478 TGGATGCAATTTTTGGTGTCCA 59.298 40.909 0.00 0.00 32.48 4.02
32 33 3.327172 TGGATGCAATTTTTGGTGTCCAT 59.673 39.130 0.00 0.00 31.53 3.41
33 34 3.934579 GGATGCAATTTTTGGTGTCCATC 59.065 43.478 0.00 0.00 31.53 3.51
34 35 4.322953 GGATGCAATTTTTGGTGTCCATCT 60.323 41.667 0.00 0.00 31.53 2.90
35 36 5.105392 GGATGCAATTTTTGGTGTCCATCTA 60.105 40.000 0.00 0.00 31.53 1.98
36 37 5.999205 TGCAATTTTTGGTGTCCATCTAT 57.001 34.783 0.00 0.00 31.53 1.98
37 38 6.357579 TGCAATTTTTGGTGTCCATCTATT 57.642 33.333 0.00 0.00 31.53 1.73
38 39 6.164876 TGCAATTTTTGGTGTCCATCTATTG 58.835 36.000 0.00 0.00 31.53 1.90
39 40 6.014755 TGCAATTTTTGGTGTCCATCTATTGA 60.015 34.615 14.99 0.00 31.98 2.57
40 41 7.043565 GCAATTTTTGGTGTCCATCTATTGAT 58.956 34.615 14.99 0.00 31.98 2.57
41 42 8.196771 GCAATTTTTGGTGTCCATCTATTGATA 58.803 33.333 14.99 0.00 31.98 2.15
42 43 9.740239 CAATTTTTGGTGTCCATCTATTGATAG 57.260 33.333 0.00 0.00 31.98 2.08
43 44 9.699410 AATTTTTGGTGTCCATCTATTGATAGA 57.301 29.630 3.37 3.37 43.00 1.98
44 45 9.699410 ATTTTTGGTGTCCATCTATTGATAGAA 57.301 29.630 4.92 0.00 42.20 2.10
45 46 8.506168 TTTTGGTGTCCATCTATTGATAGAAC 57.494 34.615 4.92 0.78 42.20 3.01
46 47 5.842907 TGGTGTCCATCTATTGATAGAACG 58.157 41.667 4.92 0.65 42.20 3.95
47 48 5.596772 TGGTGTCCATCTATTGATAGAACGA 59.403 40.000 4.92 1.71 42.20 3.85
48 49 6.097696 TGGTGTCCATCTATTGATAGAACGAA 59.902 38.462 4.92 0.00 42.20 3.85
49 50 6.984474 GGTGTCCATCTATTGATAGAACGAAA 59.016 38.462 4.92 0.00 42.20 3.46
50 51 7.657761 GGTGTCCATCTATTGATAGAACGAAAT 59.342 37.037 4.92 0.00 42.20 2.17
51 52 9.046296 GTGTCCATCTATTGATAGAACGAAATT 57.954 33.333 4.92 0.00 42.20 1.82
52 53 9.613428 TGTCCATCTATTGATAGAACGAAATTT 57.387 29.630 4.92 0.00 42.20 1.82
53 54 9.869844 GTCCATCTATTGATAGAACGAAATTTG 57.130 33.333 0.00 0.00 42.20 2.32
54 55 9.830975 TCCATCTATTGATAGAACGAAATTTGA 57.169 29.630 0.00 0.00 42.20 2.69
65 66 9.823647 ATAGAACGAAATTTGATAGATGTCTGT 57.176 29.630 0.00 0.00 0.00 3.41
66 67 7.968246 AGAACGAAATTTGATAGATGTCTGTG 58.032 34.615 0.00 0.00 0.00 3.66
67 68 6.111768 ACGAAATTTGATAGATGTCTGTGC 57.888 37.500 0.00 0.00 0.00 4.57
68 69 5.643348 ACGAAATTTGATAGATGTCTGTGCA 59.357 36.000 0.00 0.00 0.00 4.57
69 70 5.961843 CGAAATTTGATAGATGTCTGTGCAC 59.038 40.000 10.75 10.75 0.00 4.57
70 71 6.183360 CGAAATTTGATAGATGTCTGTGCACT 60.183 38.462 19.41 0.00 0.00 4.40
71 72 7.458409 AAATTTGATAGATGTCTGTGCACTT 57.542 32.000 19.41 0.00 0.00 3.16
72 73 5.868043 TTTGATAGATGTCTGTGCACTTG 57.132 39.130 19.41 11.07 0.00 3.16
73 74 4.541973 TGATAGATGTCTGTGCACTTGT 57.458 40.909 19.41 0.00 0.00 3.16
74 75 4.898320 TGATAGATGTCTGTGCACTTGTT 58.102 39.130 19.41 0.00 0.00 2.83
75 76 4.692155 TGATAGATGTCTGTGCACTTGTTG 59.308 41.667 19.41 3.43 0.00 3.33
89 90 5.808042 CACTTGTTGCTACAATAGATGCT 57.192 39.130 14.05 0.00 43.02 3.79
90 91 6.908870 CACTTGTTGCTACAATAGATGCTA 57.091 37.500 14.05 0.00 43.02 3.49
91 92 6.941802 CACTTGTTGCTACAATAGATGCTAG 58.058 40.000 14.05 2.13 43.02 3.42
92 93 6.758416 CACTTGTTGCTACAATAGATGCTAGA 59.242 38.462 14.05 0.00 43.02 2.43
93 94 6.983307 ACTTGTTGCTACAATAGATGCTAGAG 59.017 38.462 14.05 0.95 43.02 2.43
94 95 6.715347 TGTTGCTACAATAGATGCTAGAGA 57.285 37.500 0.00 0.00 0.00 3.10
95 96 7.295322 TGTTGCTACAATAGATGCTAGAGAT 57.705 36.000 0.00 0.00 0.00 2.75
96 97 7.150640 TGTTGCTACAATAGATGCTAGAGATG 58.849 38.462 0.00 0.00 0.00 2.90
97 98 5.718146 TGCTACAATAGATGCTAGAGATGC 58.282 41.667 0.00 0.00 0.00 3.91
98 99 4.797868 GCTACAATAGATGCTAGAGATGCG 59.202 45.833 0.00 0.00 0.00 4.73
99 100 5.392487 GCTACAATAGATGCTAGAGATGCGA 60.392 44.000 0.00 0.00 0.00 5.10
100 101 5.657826 ACAATAGATGCTAGAGATGCGAT 57.342 39.130 0.00 0.00 0.00 4.58
101 102 6.035368 ACAATAGATGCTAGAGATGCGATT 57.965 37.500 0.00 0.00 0.00 3.34
102 103 7.163001 ACAATAGATGCTAGAGATGCGATTA 57.837 36.000 0.00 0.00 0.00 1.75
103 104 7.257003 ACAATAGATGCTAGAGATGCGATTAG 58.743 38.462 0.00 0.00 0.00 1.73
104 105 7.121907 ACAATAGATGCTAGAGATGCGATTAGA 59.878 37.037 0.00 0.00 0.00 2.10
105 106 7.822161 ATAGATGCTAGAGATGCGATTAGAT 57.178 36.000 0.00 0.00 0.00 1.98
106 107 5.893687 AGATGCTAGAGATGCGATTAGATG 58.106 41.667 0.00 0.00 0.00 2.90
107 108 3.842820 TGCTAGAGATGCGATTAGATGC 58.157 45.455 0.00 0.00 0.00 3.91
108 109 3.256631 TGCTAGAGATGCGATTAGATGCA 59.743 43.478 0.00 0.00 46.51 3.96
109 110 4.240888 GCTAGAGATGCGATTAGATGCAA 58.759 43.478 0.00 0.00 45.45 4.08
110 111 4.687948 GCTAGAGATGCGATTAGATGCAAA 59.312 41.667 0.00 0.00 45.45 3.68
111 112 5.163972 GCTAGAGATGCGATTAGATGCAAAG 60.164 44.000 0.00 0.00 45.45 2.77
112 113 4.953667 AGAGATGCGATTAGATGCAAAGA 58.046 39.130 0.00 0.00 45.45 2.52
113 114 5.363101 AGAGATGCGATTAGATGCAAAGAA 58.637 37.500 0.00 0.00 45.45 2.52
114 115 5.466058 AGAGATGCGATTAGATGCAAAGAAG 59.534 40.000 0.00 0.00 45.45 2.85
115 116 3.680642 TGCGATTAGATGCAAAGAAGC 57.319 42.857 0.00 0.00 38.34 3.86
125 126 2.833794 TGCAAAGAAGCAACGTCTACT 58.166 42.857 0.00 0.00 42.46 2.57
126 127 3.202906 TGCAAAGAAGCAACGTCTACTT 58.797 40.909 0.00 0.00 42.46 2.24
127 128 3.247648 TGCAAAGAAGCAACGTCTACTTC 59.752 43.478 14.13 14.13 42.46 3.01
133 134 6.328641 AGAAGCAACGTCTACTTCTTTAGA 57.671 37.500 17.28 0.00 46.04 2.10
134 135 6.151004 AGAAGCAACGTCTACTTCTTTAGAC 58.849 40.000 17.28 0.93 46.04 2.59
135 136 5.708877 AGCAACGTCTACTTCTTTAGACT 57.291 39.130 8.30 0.00 44.05 3.24
136 137 5.701855 AGCAACGTCTACTTCTTTAGACTC 58.298 41.667 8.30 0.00 44.05 3.36
137 138 4.554200 GCAACGTCTACTTCTTTAGACTCG 59.446 45.833 8.30 0.23 44.05 4.18
138 139 5.616424 GCAACGTCTACTTCTTTAGACTCGA 60.616 44.000 8.30 0.00 44.05 4.04
139 140 6.369005 CAACGTCTACTTCTTTAGACTCGAA 58.631 40.000 8.30 0.00 44.05 3.71
140 141 6.168164 ACGTCTACTTCTTTAGACTCGAAG 57.832 41.667 8.30 0.00 44.05 3.79
141 142 5.931146 ACGTCTACTTCTTTAGACTCGAAGA 59.069 40.000 13.10 6.60 44.05 2.87
142 143 6.426328 ACGTCTACTTCTTTAGACTCGAAGAA 59.574 38.462 13.10 12.23 44.05 2.52
151 152 9.765795 TTCTTTAGACTCGAAGAAGAAAGAAAT 57.234 29.630 14.54 0.00 37.11 2.17
155 156 7.532682 AGACTCGAAGAAGAAAGAAATATGC 57.467 36.000 0.00 0.00 34.09 3.14
156 157 7.099764 AGACTCGAAGAAGAAAGAAATATGCA 58.900 34.615 0.00 0.00 34.09 3.96
157 158 7.604164 AGACTCGAAGAAGAAAGAAATATGCAA 59.396 33.333 0.00 0.00 34.09 4.08
158 159 7.746929 ACTCGAAGAAGAAAGAAATATGCAAG 58.253 34.615 0.00 0.00 34.09 4.01
159 160 7.604164 ACTCGAAGAAGAAAGAAATATGCAAGA 59.396 33.333 0.00 0.00 34.09 3.02
160 161 8.498054 TCGAAGAAGAAAGAAATATGCAAGAT 57.502 30.769 0.00 0.00 0.00 2.40
161 162 8.393366 TCGAAGAAGAAAGAAATATGCAAGATG 58.607 33.333 0.00 0.00 0.00 2.90
162 163 7.642978 CGAAGAAGAAAGAAATATGCAAGATGG 59.357 37.037 0.00 0.00 0.00 3.51
163 164 8.585471 AAGAAGAAAGAAATATGCAAGATGGA 57.415 30.769 0.00 0.00 0.00 3.41
164 165 8.223177 AGAAGAAAGAAATATGCAAGATGGAG 57.777 34.615 0.00 0.00 0.00 3.86
165 166 8.051535 AGAAGAAAGAAATATGCAAGATGGAGA 58.948 33.333 0.00 0.00 0.00 3.71
166 167 8.585471 AAGAAAGAAATATGCAAGATGGAGAA 57.415 30.769 0.00 0.00 0.00 2.87
167 168 8.763984 AGAAAGAAATATGCAAGATGGAGAAT 57.236 30.769 0.00 0.00 0.00 2.40
168 169 9.198475 AGAAAGAAATATGCAAGATGGAGAATT 57.802 29.630 0.00 0.00 0.00 2.17
169 170 9.460906 GAAAGAAATATGCAAGATGGAGAATTC 57.539 33.333 0.00 0.00 0.00 2.17
170 171 7.199541 AGAAATATGCAAGATGGAGAATTCG 57.800 36.000 0.00 0.00 0.00 3.34
171 172 6.769822 AGAAATATGCAAGATGGAGAATTCGT 59.230 34.615 0.00 0.00 0.00 3.85
172 173 7.933577 AGAAATATGCAAGATGGAGAATTCGTA 59.066 33.333 0.00 0.00 0.00 3.43
173 174 7.664082 AATATGCAAGATGGAGAATTCGTAG 57.336 36.000 0.00 0.00 0.00 3.51
174 175 4.736126 TGCAAGATGGAGAATTCGTAGA 57.264 40.909 0.00 0.00 0.00 2.59
175 176 5.282055 TGCAAGATGGAGAATTCGTAGAT 57.718 39.130 0.00 0.00 35.04 1.98
176 177 5.292765 TGCAAGATGGAGAATTCGTAGATC 58.707 41.667 0.00 1.35 35.04 2.75
177 178 5.163416 TGCAAGATGGAGAATTCGTAGATCA 60.163 40.000 0.00 0.00 35.04 2.92
178 179 5.755375 GCAAGATGGAGAATTCGTAGATCAA 59.245 40.000 0.00 0.00 35.04 2.57
179 180 6.292596 GCAAGATGGAGAATTCGTAGATCAAC 60.293 42.308 0.00 0.00 35.04 3.18
180 181 6.471233 AGATGGAGAATTCGTAGATCAACA 57.529 37.500 0.00 0.00 35.04 3.33
181 182 6.878317 AGATGGAGAATTCGTAGATCAACAA 58.122 36.000 0.00 0.00 35.04 2.83
182 183 6.758886 AGATGGAGAATTCGTAGATCAACAAC 59.241 38.462 0.00 0.00 35.04 3.32
183 184 4.862574 TGGAGAATTCGTAGATCAACAACG 59.137 41.667 0.00 0.00 35.04 4.10
184 185 5.100259 GGAGAATTCGTAGATCAACAACGA 58.900 41.667 0.00 8.07 43.31 3.85
191 192 6.627690 TCGTAGATCAACAACGAAAGAATC 57.372 37.500 9.29 0.00 42.18 2.52
192 193 6.153756 TCGTAGATCAACAACGAAAGAATCA 58.846 36.000 9.29 0.00 42.18 2.57
193 194 6.643360 TCGTAGATCAACAACGAAAGAATCAA 59.357 34.615 9.29 0.00 42.18 2.57
194 195 6.732392 CGTAGATCAACAACGAAAGAATCAAC 59.268 38.462 0.00 0.00 38.89 3.18
195 196 6.618287 AGATCAACAACGAAAGAATCAACA 57.382 33.333 0.00 0.00 0.00 3.33
196 197 7.026631 AGATCAACAACGAAAGAATCAACAA 57.973 32.000 0.00 0.00 0.00 2.83
197 198 7.134815 AGATCAACAACGAAAGAATCAACAAG 58.865 34.615 0.00 0.00 0.00 3.16
198 199 6.429791 TCAACAACGAAAGAATCAACAAGA 57.570 33.333 0.00 0.00 0.00 3.02
199 200 7.026631 TCAACAACGAAAGAATCAACAAGAT 57.973 32.000 0.00 0.00 39.09 2.40
200 201 8.148807 TCAACAACGAAAGAATCAACAAGATA 57.851 30.769 0.00 0.00 35.39 1.98
201 202 8.067784 TCAACAACGAAAGAATCAACAAGATAC 58.932 33.333 0.00 0.00 35.39 2.24
202 203 7.730364 ACAACGAAAGAATCAACAAGATACT 57.270 32.000 0.00 0.00 35.39 2.12
203 204 8.827177 ACAACGAAAGAATCAACAAGATACTA 57.173 30.769 0.00 0.00 35.39 1.82
204 205 9.268268 ACAACGAAAGAATCAACAAGATACTAA 57.732 29.630 0.00 0.00 35.39 2.24
207 208 9.099454 ACGAAAGAATCAACAAGATACTAATCC 57.901 33.333 0.00 0.00 35.39 3.01
208 209 9.098355 CGAAAGAATCAACAAGATACTAATCCA 57.902 33.333 0.00 0.00 35.39 3.41
211 212 9.965902 AAGAATCAACAAGATACTAATCCAACT 57.034 29.630 0.00 0.00 35.39 3.16
215 216 9.823647 ATCAACAAGATACTAATCCAACTACTG 57.176 33.333 0.00 0.00 34.43 2.74
231 232 5.499004 ACTACTGGAAGCAGTTATGGAAA 57.501 39.130 0.00 0.00 37.21 3.13
232 233 6.067217 ACTACTGGAAGCAGTTATGGAAAT 57.933 37.500 0.00 0.00 37.21 2.17
233 234 6.485171 ACTACTGGAAGCAGTTATGGAAATT 58.515 36.000 0.00 0.00 37.21 1.82
234 235 6.948309 ACTACTGGAAGCAGTTATGGAAATTT 59.052 34.615 0.00 0.00 37.21 1.82
235 236 6.029346 ACTGGAAGCAGTTATGGAAATTTG 57.971 37.500 0.00 0.00 37.60 2.32
236 237 5.774690 ACTGGAAGCAGTTATGGAAATTTGA 59.225 36.000 0.00 0.00 37.60 2.69
237 238 6.024552 TGGAAGCAGTTATGGAAATTTGAC 57.975 37.500 0.00 0.00 0.00 3.18
238 239 5.538053 TGGAAGCAGTTATGGAAATTTGACA 59.462 36.000 0.00 0.00 0.00 3.58
239 240 6.211184 TGGAAGCAGTTATGGAAATTTGACAT 59.789 34.615 0.00 2.81 0.00 3.06
240 241 6.753744 GGAAGCAGTTATGGAAATTTGACATC 59.246 38.462 0.00 0.00 0.00 3.06
241 242 7.363268 GGAAGCAGTTATGGAAATTTGACATCT 60.363 37.037 0.00 0.00 0.00 2.90
242 243 7.472334 AGCAGTTATGGAAATTTGACATCTT 57.528 32.000 0.00 0.00 0.00 2.40
243 244 7.899973 AGCAGTTATGGAAATTTGACATCTTT 58.100 30.769 0.00 0.00 0.00 2.52
244 245 8.370182 AGCAGTTATGGAAATTTGACATCTTTT 58.630 29.630 0.00 0.00 0.00 2.27
245 246 9.638239 GCAGTTATGGAAATTTGACATCTTTTA 57.362 29.630 0.00 0.00 0.00 1.52
262 263 9.665719 ACATCTTTTAAAATGTCTTTTTGTGGT 57.334 25.926 0.09 0.00 38.03 4.16
265 266 9.936759 TCTTTTAAAATGTCTTTTTGTGGTTCT 57.063 25.926 0.09 0.00 38.03 3.01
268 269 9.495572 TTTAAAATGTCTTTTTGTGGTTCTTGT 57.504 25.926 6.69 0.00 38.03 3.16
269 270 7.977789 AAAATGTCTTTTTGTGGTTCTTGTT 57.022 28.000 0.00 0.00 36.18 2.83
270 271 7.977789 AAATGTCTTTTTGTGGTTCTTGTTT 57.022 28.000 0.00 0.00 0.00 2.83
271 272 7.977789 AATGTCTTTTTGTGGTTCTTGTTTT 57.022 28.000 0.00 0.00 0.00 2.43
272 273 7.977789 ATGTCTTTTTGTGGTTCTTGTTTTT 57.022 28.000 0.00 0.00 0.00 1.94
273 274 7.414814 TGTCTTTTTGTGGTTCTTGTTTTTC 57.585 32.000 0.00 0.00 0.00 2.29
274 275 7.213678 TGTCTTTTTGTGGTTCTTGTTTTTCT 58.786 30.769 0.00 0.00 0.00 2.52
275 276 7.713073 TGTCTTTTTGTGGTTCTTGTTTTTCTT 59.287 29.630 0.00 0.00 0.00 2.52
276 277 8.556194 GTCTTTTTGTGGTTCTTGTTTTTCTTT 58.444 29.630 0.00 0.00 0.00 2.52
277 278 9.765795 TCTTTTTGTGGTTCTTGTTTTTCTTTA 57.234 25.926 0.00 0.00 0.00 1.85
279 280 9.549078 TTTTTGTGGTTCTTGTTTTTCTTTAGT 57.451 25.926 0.00 0.00 0.00 2.24
280 281 8.751302 TTTGTGGTTCTTGTTTTTCTTTAGTC 57.249 30.769 0.00 0.00 0.00 2.59
281 282 7.696992 TGTGGTTCTTGTTTTTCTTTAGTCT 57.303 32.000 0.00 0.00 0.00 3.24
282 283 8.117813 TGTGGTTCTTGTTTTTCTTTAGTCTT 57.882 30.769 0.00 0.00 0.00 3.01
283 284 9.233649 TGTGGTTCTTGTTTTTCTTTAGTCTTA 57.766 29.630 0.00 0.00 0.00 2.10
284 285 9.499585 GTGGTTCTTGTTTTTCTTTAGTCTTAC 57.500 33.333 0.00 0.00 0.00 2.34
285 286 9.457436 TGGTTCTTGTTTTTCTTTAGTCTTACT 57.543 29.630 0.00 0.00 0.00 2.24
332 333 9.849166 AATGTACTTTAATGTATCCAAAAACCG 57.151 29.630 4.68 0.00 0.00 4.44
333 334 8.393671 TGTACTTTAATGTATCCAAAAACCGT 57.606 30.769 4.68 0.00 0.00 4.83
334 335 8.848182 TGTACTTTAATGTATCCAAAAACCGTT 58.152 29.630 4.68 0.00 0.00 4.44
335 336 9.120422 GTACTTTAATGTATCCAAAAACCGTTG 57.880 33.333 4.68 0.00 0.00 4.10
336 337 7.942990 ACTTTAATGTATCCAAAAACCGTTGA 58.057 30.769 0.00 0.00 0.00 3.18
337 338 8.581578 ACTTTAATGTATCCAAAAACCGTTGAT 58.418 29.630 0.00 0.00 0.00 2.57
338 339 8.749841 TTTAATGTATCCAAAAACCGTTGATG 57.250 30.769 0.00 0.00 0.00 3.07
339 340 6.582677 AATGTATCCAAAAACCGTTGATGA 57.417 33.333 0.00 0.00 0.00 2.92
340 341 6.582677 ATGTATCCAAAAACCGTTGATGAA 57.417 33.333 0.00 0.00 0.00 2.57
341 342 6.007936 TGTATCCAAAAACCGTTGATGAAG 57.992 37.500 0.00 0.00 0.00 3.02
342 343 5.533154 TGTATCCAAAAACCGTTGATGAAGT 59.467 36.000 0.00 0.00 0.00 3.01
343 344 6.711194 TGTATCCAAAAACCGTTGATGAAGTA 59.289 34.615 0.00 0.00 0.00 2.24
344 345 6.642707 ATCCAAAAACCGTTGATGAAGTAA 57.357 33.333 0.00 0.00 0.00 2.24
345 346 6.642707 TCCAAAAACCGTTGATGAAGTAAT 57.357 33.333 0.00 0.00 0.00 1.89
346 347 7.747155 TCCAAAAACCGTTGATGAAGTAATA 57.253 32.000 0.00 0.00 0.00 0.98
347 348 8.343168 TCCAAAAACCGTTGATGAAGTAATAT 57.657 30.769 0.00 0.00 0.00 1.28
348 349 8.240682 TCCAAAAACCGTTGATGAAGTAATATG 58.759 33.333 0.00 0.00 0.00 1.78
349 350 8.240682 CCAAAAACCGTTGATGAAGTAATATGA 58.759 33.333 0.00 0.00 0.00 2.15
350 351 9.619316 CAAAAACCGTTGATGAAGTAATATGAA 57.381 29.630 0.00 0.00 0.00 2.57
353 354 9.787532 AAACCGTTGATGAAGTAATATGAAATG 57.212 29.630 0.00 0.00 0.00 2.32
354 355 8.731275 ACCGTTGATGAAGTAATATGAAATGA 57.269 30.769 0.00 0.00 0.00 2.57
355 356 8.830580 ACCGTTGATGAAGTAATATGAAATGAG 58.169 33.333 0.00 0.00 0.00 2.90
356 357 8.285394 CCGTTGATGAAGTAATATGAAATGAGG 58.715 37.037 0.00 0.00 0.00 3.86
357 358 7.800380 CGTTGATGAAGTAATATGAAATGAGGC 59.200 37.037 0.00 0.00 0.00 4.70
358 359 7.425577 TGATGAAGTAATATGAAATGAGGCG 57.574 36.000 0.00 0.00 0.00 5.52
359 360 7.216494 TGATGAAGTAATATGAAATGAGGCGA 58.784 34.615 0.00 0.00 0.00 5.54
360 361 7.714813 TGATGAAGTAATATGAAATGAGGCGAA 59.285 33.333 0.00 0.00 0.00 4.70
361 362 7.857734 TGAAGTAATATGAAATGAGGCGAAA 57.142 32.000 0.00 0.00 0.00 3.46
362 363 8.275015 TGAAGTAATATGAAATGAGGCGAAAA 57.725 30.769 0.00 0.00 0.00 2.29
363 364 8.735315 TGAAGTAATATGAAATGAGGCGAAAAA 58.265 29.630 0.00 0.00 0.00 1.94
382 383 4.928661 AAAATATATGCGGACGAGATGC 57.071 40.909 0.00 0.00 0.00 3.91
383 384 2.194800 ATATATGCGGACGAGATGCG 57.805 50.000 0.00 0.00 46.53 4.73
384 385 0.170339 TATATGCGGACGAGATGCGG 59.830 55.000 0.00 0.00 46.49 5.69
390 391 2.184322 GACGAGATGCGGCCAAGA 59.816 61.111 2.24 0.00 44.13 3.02
391 392 1.227380 GACGAGATGCGGCCAAGAT 60.227 57.895 2.24 0.00 44.13 2.40
392 393 1.493950 GACGAGATGCGGCCAAGATG 61.494 60.000 2.24 0.00 44.13 2.90
393 394 1.227350 CGAGATGCGGCCAAGATGA 60.227 57.895 2.24 0.00 36.03 2.92
394 395 1.220169 CGAGATGCGGCCAAGATGAG 61.220 60.000 2.24 0.00 36.03 2.90
395 396 0.883814 GAGATGCGGCCAAGATGAGG 60.884 60.000 2.24 0.00 0.00 3.86
434 435 2.720688 GACGCGTCGACAAATCTGA 58.279 52.632 25.19 0.00 0.00 3.27
435 436 1.057636 GACGCGTCGACAAATCTGAA 58.942 50.000 25.19 0.00 0.00 3.02
436 437 1.654105 GACGCGTCGACAAATCTGAAT 59.346 47.619 25.19 0.00 0.00 2.57
437 438 1.390123 ACGCGTCGACAAATCTGAATG 59.610 47.619 17.16 0.00 0.00 2.67
438 439 1.267038 CGCGTCGACAAATCTGAATGG 60.267 52.381 17.16 0.00 0.00 3.16
439 440 1.999735 GCGTCGACAAATCTGAATGGA 59.000 47.619 17.16 0.00 0.00 3.41
440 441 2.222819 GCGTCGACAAATCTGAATGGAC 60.223 50.000 17.16 0.00 0.00 4.02
441 442 2.993220 CGTCGACAAATCTGAATGGACA 59.007 45.455 17.16 0.00 0.00 4.02
442 443 3.181530 CGTCGACAAATCTGAATGGACAC 60.182 47.826 17.16 0.00 0.00 3.67
443 444 3.125316 GTCGACAAATCTGAATGGACACC 59.875 47.826 11.55 0.00 0.00 4.16
444 445 2.094258 CGACAAATCTGAATGGACACCG 59.906 50.000 0.00 0.00 0.00 4.94
445 446 1.812571 ACAAATCTGAATGGACACCGC 59.187 47.619 0.00 0.00 0.00 5.68
446 447 1.133025 CAAATCTGAATGGACACCGCC 59.867 52.381 0.00 0.00 0.00 6.13
447 448 0.620556 AATCTGAATGGACACCGCCT 59.379 50.000 0.00 0.00 0.00 5.52
448 449 0.179000 ATCTGAATGGACACCGCCTC 59.821 55.000 0.00 0.00 0.00 4.70
449 450 1.191489 TCTGAATGGACACCGCCTCA 61.191 55.000 0.00 0.00 0.00 3.86
450 451 0.107508 CTGAATGGACACCGCCTCAT 60.108 55.000 0.00 0.00 0.00 2.90
451 452 0.327924 TGAATGGACACCGCCTCATT 59.672 50.000 0.00 0.00 33.17 2.57
452 453 0.734889 GAATGGACACCGCCTCATTG 59.265 55.000 0.00 0.00 30.97 2.82
453 454 0.038166 AATGGACACCGCCTCATTGT 59.962 50.000 0.00 0.00 0.00 2.71
454 455 0.392998 ATGGACACCGCCTCATTGTC 60.393 55.000 0.00 0.00 39.18 3.18
455 456 1.003839 GGACACCGCCTCATTGTCA 60.004 57.895 3.57 0.00 41.27 3.58
456 457 0.392998 GGACACCGCCTCATTGTCAT 60.393 55.000 3.57 0.00 41.27 3.06
457 458 1.009829 GACACCGCCTCATTGTCATC 58.990 55.000 0.00 0.00 39.60 2.92
458 459 0.615331 ACACCGCCTCATTGTCATCT 59.385 50.000 0.00 0.00 0.00 2.90
459 460 1.293924 CACCGCCTCATTGTCATCTC 58.706 55.000 0.00 0.00 0.00 2.75
460 461 1.134580 CACCGCCTCATTGTCATCTCT 60.135 52.381 0.00 0.00 0.00 3.10
461 462 2.101415 CACCGCCTCATTGTCATCTCTA 59.899 50.000 0.00 0.00 0.00 2.43
462 463 2.766263 ACCGCCTCATTGTCATCTCTAA 59.234 45.455 0.00 0.00 0.00 2.10
463 464 3.197766 ACCGCCTCATTGTCATCTCTAAA 59.802 43.478 0.00 0.00 0.00 1.85
464 465 3.557595 CCGCCTCATTGTCATCTCTAAAC 59.442 47.826 0.00 0.00 0.00 2.01
465 466 4.183865 CGCCTCATTGTCATCTCTAAACA 58.816 43.478 0.00 0.00 0.00 2.83
466 467 4.269603 CGCCTCATTGTCATCTCTAAACAG 59.730 45.833 0.00 0.00 0.00 3.16
467 468 5.423015 GCCTCATTGTCATCTCTAAACAGA 58.577 41.667 0.00 0.00 0.00 3.41
468 469 5.293079 GCCTCATTGTCATCTCTAAACAGAC 59.707 44.000 0.00 0.00 0.00 3.51
469 470 6.401394 CCTCATTGTCATCTCTAAACAGACA 58.599 40.000 0.00 0.00 37.43 3.41
474 475 7.715265 TTGTCATCTCTAAACAGACAAAGTC 57.285 36.000 0.00 0.00 43.71 3.01
475 476 6.223852 TGTCATCTCTAAACAGACAAAGTCC 58.776 40.000 0.00 0.00 36.39 3.85
476 477 5.346281 GTCATCTCTAAACAGACAAAGTCCG 59.654 44.000 0.00 0.00 32.18 4.79
477 478 5.243060 TCATCTCTAAACAGACAAAGTCCGA 59.757 40.000 0.00 0.00 32.18 4.55
478 479 5.524971 TCTCTAAACAGACAAAGTCCGAA 57.475 39.130 0.00 0.00 32.18 4.30
479 480 5.287226 TCTCTAAACAGACAAAGTCCGAAC 58.713 41.667 0.00 0.00 32.18 3.95
480 481 5.013568 TCTAAACAGACAAAGTCCGAACA 57.986 39.130 0.00 0.00 32.18 3.18
481 482 5.421277 TCTAAACAGACAAAGTCCGAACAA 58.579 37.500 0.00 0.00 32.18 2.83
482 483 5.875910 TCTAAACAGACAAAGTCCGAACAAA 59.124 36.000 0.00 0.00 32.18 2.83
483 484 5.379732 AAACAGACAAAGTCCGAACAAAA 57.620 34.783 0.00 0.00 32.18 2.44
484 485 4.351131 ACAGACAAAGTCCGAACAAAAC 57.649 40.909 0.00 0.00 32.18 2.43
485 486 3.754323 ACAGACAAAGTCCGAACAAAACA 59.246 39.130 0.00 0.00 32.18 2.83
486 487 4.142687 ACAGACAAAGTCCGAACAAAACAG 60.143 41.667 0.00 0.00 32.18 3.16
487 488 4.094294 CAGACAAAGTCCGAACAAAACAGA 59.906 41.667 0.00 0.00 32.18 3.41
488 489 4.094442 AGACAAAGTCCGAACAAAACAGAC 59.906 41.667 0.00 0.00 32.18 3.51
489 490 3.181514 ACAAAGTCCGAACAAAACAGACG 60.182 43.478 0.00 0.00 32.70 4.18
490 491 2.304751 AGTCCGAACAAAACAGACGT 57.695 45.000 0.00 0.00 32.70 4.34
491 492 2.199236 AGTCCGAACAAAACAGACGTC 58.801 47.619 7.70 7.70 32.70 4.34
492 493 1.259770 GTCCGAACAAAACAGACGTCC 59.740 52.381 13.01 0.00 0.00 4.79
493 494 1.134759 TCCGAACAAAACAGACGTCCA 60.135 47.619 13.01 0.00 0.00 4.02
494 495 1.871039 CCGAACAAAACAGACGTCCAT 59.129 47.619 13.01 0.00 0.00 3.41
495 496 2.289547 CCGAACAAAACAGACGTCCATT 59.710 45.455 13.01 3.78 0.00 3.16
496 497 3.242936 CCGAACAAAACAGACGTCCATTT 60.243 43.478 13.01 10.32 0.00 2.32
497 498 4.347813 CGAACAAAACAGACGTCCATTTT 58.652 39.130 13.01 15.71 0.00 1.82
498 499 5.503498 CGAACAAAACAGACGTCCATTTTA 58.497 37.500 20.76 0.00 0.00 1.52
499 500 5.966503 CGAACAAAACAGACGTCCATTTTAA 59.033 36.000 20.76 0.00 0.00 1.52
500 501 6.140108 CGAACAAAACAGACGTCCATTTTAAG 59.860 38.462 20.76 14.59 0.00 1.85
501 502 6.445357 ACAAAACAGACGTCCATTTTAAGT 57.555 33.333 20.76 15.06 0.00 2.24
502 503 6.492254 ACAAAACAGACGTCCATTTTAAGTC 58.508 36.000 20.76 0.00 0.00 3.01
503 504 4.985044 AACAGACGTCCATTTTAAGTCG 57.015 40.909 13.01 0.00 36.97 4.18
504 505 3.986277 ACAGACGTCCATTTTAAGTCGT 58.014 40.909 13.01 0.00 36.97 4.34
505 506 3.739300 ACAGACGTCCATTTTAAGTCGTG 59.261 43.478 13.01 1.31 36.97 4.35
506 507 3.739300 CAGACGTCCATTTTAAGTCGTGT 59.261 43.478 13.01 0.00 36.97 4.49
507 508 3.739300 AGACGTCCATTTTAAGTCGTGTG 59.261 43.478 13.01 0.00 36.97 3.82
508 509 3.460103 ACGTCCATTTTAAGTCGTGTGT 58.540 40.909 0.00 0.00 0.00 3.72
509 510 3.872771 ACGTCCATTTTAAGTCGTGTGTT 59.127 39.130 0.00 0.00 0.00 3.32
510 511 4.208355 CGTCCATTTTAAGTCGTGTGTTG 58.792 43.478 0.00 0.00 0.00 3.33
511 512 4.533222 GTCCATTTTAAGTCGTGTGTTGG 58.467 43.478 0.00 0.00 0.00 3.77
512 513 4.273969 GTCCATTTTAAGTCGTGTGTTGGA 59.726 41.667 0.00 0.00 0.00 3.53
513 514 4.513692 TCCATTTTAAGTCGTGTGTTGGAG 59.486 41.667 0.00 0.00 0.00 3.86
514 515 4.274950 CCATTTTAAGTCGTGTGTTGGAGT 59.725 41.667 0.00 0.00 0.00 3.85
515 516 5.220970 CCATTTTAAGTCGTGTGTTGGAGTT 60.221 40.000 0.00 0.00 0.00 3.01
516 517 4.868450 TTTAAGTCGTGTGTTGGAGTTG 57.132 40.909 0.00 0.00 0.00 3.16
517 518 1.014352 AAGTCGTGTGTTGGAGTTGC 58.986 50.000 0.00 0.00 0.00 4.17
518 519 0.814010 AGTCGTGTGTTGGAGTTGCC 60.814 55.000 0.00 0.00 37.10 4.52
528 529 2.128771 TGGAGTTGCCATTAGAAGCC 57.871 50.000 0.00 0.00 43.33 4.35
529 530 1.340991 TGGAGTTGCCATTAGAAGCCC 60.341 52.381 0.00 0.00 43.33 5.19
530 531 1.393603 GAGTTGCCATTAGAAGCCCC 58.606 55.000 0.00 0.00 0.00 5.80
531 532 1.002857 AGTTGCCATTAGAAGCCCCT 58.997 50.000 0.00 0.00 0.00 4.79
532 533 1.359130 AGTTGCCATTAGAAGCCCCTT 59.641 47.619 0.00 0.00 0.00 3.95
533 534 2.179427 GTTGCCATTAGAAGCCCCTTT 58.821 47.619 0.00 0.00 0.00 3.11
534 535 2.143876 TGCCATTAGAAGCCCCTTTC 57.856 50.000 0.00 0.00 0.00 2.62
535 536 1.640670 TGCCATTAGAAGCCCCTTTCT 59.359 47.619 0.00 0.00 40.39 2.52
536 537 2.849943 TGCCATTAGAAGCCCCTTTCTA 59.150 45.455 0.00 0.00 38.35 2.10
538 539 4.264172 TGCCATTAGAAGCCCCTTTCTAAA 60.264 41.667 11.02 0.00 46.78 1.85
539 540 4.339530 GCCATTAGAAGCCCCTTTCTAAAG 59.660 45.833 11.02 7.67 46.78 1.85
540 541 5.755849 CCATTAGAAGCCCCTTTCTAAAGA 58.244 41.667 11.02 0.00 46.78 2.52
541 542 6.187682 CCATTAGAAGCCCCTTTCTAAAGAA 58.812 40.000 11.02 0.00 46.78 2.52
542 543 6.663523 CCATTAGAAGCCCCTTTCTAAAGAAA 59.336 38.462 11.02 5.13 46.78 2.52
543 544 7.363007 CCATTAGAAGCCCCTTTCTAAAGAAAC 60.363 40.741 11.02 0.00 46.78 2.78
544 545 4.072839 AGAAGCCCCTTTCTAAAGAAACG 58.927 43.478 4.01 0.00 38.94 3.60
545 546 3.503800 AGCCCCTTTCTAAAGAAACGT 57.496 42.857 4.01 0.00 38.94 3.99
546 547 3.409570 AGCCCCTTTCTAAAGAAACGTC 58.590 45.455 4.01 0.00 38.94 4.34
547 548 3.072622 AGCCCCTTTCTAAAGAAACGTCT 59.927 43.478 4.01 0.00 38.94 4.18
548 549 3.819337 GCCCCTTTCTAAAGAAACGTCTT 59.181 43.478 4.01 0.00 46.47 3.01
549 550 4.999311 GCCCCTTTCTAAAGAAACGTCTTA 59.001 41.667 4.01 0.00 43.59 2.10
550 551 5.106791 GCCCCTTTCTAAAGAAACGTCTTAC 60.107 44.000 4.01 0.00 43.59 2.34
551 552 5.993441 CCCCTTTCTAAAGAAACGTCTTACA 59.007 40.000 4.01 0.00 43.59 2.41
552 553 6.653740 CCCCTTTCTAAAGAAACGTCTTACAT 59.346 38.462 4.01 0.00 43.59 2.29
553 554 7.174426 CCCCTTTCTAAAGAAACGTCTTACATT 59.826 37.037 4.01 0.00 43.59 2.71
554 555 9.211485 CCCTTTCTAAAGAAACGTCTTACATTA 57.789 33.333 4.01 0.00 43.59 1.90
561 562 8.542497 AAAGAAACGTCTTACATTATAGCACA 57.458 30.769 0.00 0.00 43.59 4.57
562 563 7.757097 AGAAACGTCTTACATTATAGCACAG 57.243 36.000 0.00 0.00 0.00 3.66
563 564 7.544622 AGAAACGTCTTACATTATAGCACAGA 58.455 34.615 0.00 0.00 0.00 3.41
564 565 7.702772 AGAAACGTCTTACATTATAGCACAGAG 59.297 37.037 0.00 0.00 0.00 3.35
565 566 5.833082 ACGTCTTACATTATAGCACAGAGG 58.167 41.667 0.00 0.00 0.00 3.69
566 567 5.360144 ACGTCTTACATTATAGCACAGAGGT 59.640 40.000 0.00 0.00 0.00 3.85
567 568 6.544931 ACGTCTTACATTATAGCACAGAGGTA 59.455 38.462 0.00 0.00 34.18 3.08
568 569 7.078851 CGTCTTACATTATAGCACAGAGGTAG 58.921 42.308 0.00 0.00 32.98 3.18
569 570 7.255173 CGTCTTACATTATAGCACAGAGGTAGT 60.255 40.741 0.00 0.00 32.98 2.73
570 571 9.064706 GTCTTACATTATAGCACAGAGGTAGTA 57.935 37.037 0.00 0.00 32.98 1.82
571 572 9.286170 TCTTACATTATAGCACAGAGGTAGTAG 57.714 37.037 0.00 0.00 32.98 2.57
572 573 9.286170 CTTACATTATAGCACAGAGGTAGTAGA 57.714 37.037 0.00 0.00 32.98 2.59
573 574 9.809395 TTACATTATAGCACAGAGGTAGTAGAT 57.191 33.333 0.00 0.00 32.98 1.98
574 575 8.116651 ACATTATAGCACAGAGGTAGTAGATG 57.883 38.462 0.00 0.00 32.98 2.90
575 576 7.177568 ACATTATAGCACAGAGGTAGTAGATGG 59.822 40.741 0.00 0.00 32.98 3.51
576 577 3.390175 AGCACAGAGGTAGTAGATGGT 57.610 47.619 0.00 0.00 0.00 3.55
577 578 3.714144 AGCACAGAGGTAGTAGATGGTT 58.286 45.455 0.00 0.00 0.00 3.67
578 579 3.449018 AGCACAGAGGTAGTAGATGGTTG 59.551 47.826 0.00 0.00 0.00 3.77
579 580 3.786635 CACAGAGGTAGTAGATGGTTGC 58.213 50.000 0.00 0.00 0.00 4.17
580 581 3.195610 CACAGAGGTAGTAGATGGTTGCA 59.804 47.826 0.00 0.00 0.00 4.08
581 582 4.033709 ACAGAGGTAGTAGATGGTTGCAT 58.966 43.478 0.00 0.00 0.00 3.96
582 583 4.100189 ACAGAGGTAGTAGATGGTTGCATC 59.900 45.833 0.00 0.00 0.00 3.91
583 584 4.343526 CAGAGGTAGTAGATGGTTGCATCT 59.656 45.833 0.00 0.00 43.61 2.90
584 585 4.586841 AGAGGTAGTAGATGGTTGCATCTC 59.413 45.833 0.00 0.00 41.65 2.75
585 586 3.319405 AGGTAGTAGATGGTTGCATCTCG 59.681 47.826 0.00 0.00 41.65 4.04
586 587 3.068307 GGTAGTAGATGGTTGCATCTCGT 59.932 47.826 0.00 0.00 41.65 4.18
587 588 3.444703 AGTAGATGGTTGCATCTCGTC 57.555 47.619 0.00 0.00 41.65 4.20
588 589 2.760650 AGTAGATGGTTGCATCTCGTCA 59.239 45.455 0.00 0.00 41.65 4.35
589 590 2.768253 AGATGGTTGCATCTCGTCAA 57.232 45.000 0.00 0.00 37.35 3.18
590 591 2.350522 AGATGGTTGCATCTCGTCAAC 58.649 47.619 0.00 0.00 37.35 3.18
591 592 2.076100 GATGGTTGCATCTCGTCAACA 58.924 47.619 7.31 0.00 43.06 3.33
592 593 1.225855 TGGTTGCATCTCGTCAACAC 58.774 50.000 7.31 0.00 43.06 3.32
593 594 1.225855 GGTTGCATCTCGTCAACACA 58.774 50.000 7.31 0.00 43.06 3.72
594 595 1.806542 GGTTGCATCTCGTCAACACAT 59.193 47.619 7.31 0.00 43.06 3.21
595 596 2.226437 GGTTGCATCTCGTCAACACATT 59.774 45.455 7.31 0.00 43.06 2.71
596 597 3.304659 GGTTGCATCTCGTCAACACATTT 60.305 43.478 7.31 0.00 43.06 2.32
597 598 4.290155 GTTGCATCTCGTCAACACATTTT 58.710 39.130 0.00 0.00 41.46 1.82
598 599 4.566545 TGCATCTCGTCAACACATTTTT 57.433 36.364 0.00 0.00 0.00 1.94
622 623 7.906611 TTGACATTTCAACATACTGAAAACG 57.093 32.000 3.13 1.40 45.75 3.60
623 624 6.434596 TGACATTTCAACATACTGAAAACGG 58.565 36.000 3.13 0.29 45.75 4.44
624 625 6.038825 TGACATTTCAACATACTGAAAACGGT 59.961 34.615 3.13 2.99 45.75 4.83
625 626 6.205784 ACATTTCAACATACTGAAAACGGTG 58.794 36.000 3.13 0.71 45.75 4.94
626 627 3.889196 TCAACATACTGAAAACGGTGC 57.111 42.857 0.00 0.00 0.00 5.01
627 628 2.550606 TCAACATACTGAAAACGGTGCC 59.449 45.455 0.00 0.00 0.00 5.01
628 629 2.552315 CAACATACTGAAAACGGTGCCT 59.448 45.455 0.00 0.00 0.00 4.75
629 630 2.151202 ACATACTGAAAACGGTGCCTG 58.849 47.619 0.00 0.00 0.00 4.85
630 631 2.224426 ACATACTGAAAACGGTGCCTGA 60.224 45.455 0.00 0.00 0.00 3.86
631 632 2.623878 TACTGAAAACGGTGCCTGAA 57.376 45.000 0.00 0.00 0.00 3.02
632 633 1.981256 ACTGAAAACGGTGCCTGAAT 58.019 45.000 0.00 0.00 0.00 2.57
633 634 3.134574 ACTGAAAACGGTGCCTGAATA 57.865 42.857 0.00 0.00 0.00 1.75
634 635 3.686016 ACTGAAAACGGTGCCTGAATAT 58.314 40.909 0.00 0.00 0.00 1.28
635 636 4.079253 ACTGAAAACGGTGCCTGAATATT 58.921 39.130 0.00 0.00 0.00 1.28
636 637 4.522789 ACTGAAAACGGTGCCTGAATATTT 59.477 37.500 0.00 0.00 0.00 1.40
637 638 4.804108 TGAAAACGGTGCCTGAATATTTG 58.196 39.130 0.00 0.00 0.00 2.32
638 639 4.279671 TGAAAACGGTGCCTGAATATTTGT 59.720 37.500 0.00 0.00 0.00 2.83
639 640 3.848272 AACGGTGCCTGAATATTTGTG 57.152 42.857 0.00 0.00 0.00 3.33
640 641 2.790433 ACGGTGCCTGAATATTTGTGT 58.210 42.857 0.00 0.00 0.00 3.72
641 642 3.153919 ACGGTGCCTGAATATTTGTGTT 58.846 40.909 0.00 0.00 0.00 3.32
642 643 3.572255 ACGGTGCCTGAATATTTGTGTTT 59.428 39.130 0.00 0.00 0.00 2.83
643 644 4.038642 ACGGTGCCTGAATATTTGTGTTTT 59.961 37.500 0.00 0.00 0.00 2.43
644 645 5.241949 ACGGTGCCTGAATATTTGTGTTTTA 59.758 36.000 0.00 0.00 0.00 1.52
645 646 6.071616 ACGGTGCCTGAATATTTGTGTTTTAT 60.072 34.615 0.00 0.00 0.00 1.40
646 647 7.121463 ACGGTGCCTGAATATTTGTGTTTTATA 59.879 33.333 0.00 0.00 0.00 0.98
647 648 8.134895 CGGTGCCTGAATATTTGTGTTTTATAT 58.865 33.333 0.00 0.00 0.00 0.86
685 686 8.672214 AAAAACACTTGTTATTAACGTTTCGT 57.328 26.923 5.91 0.00 38.49 3.85
686 687 8.672214 AAAACACTTGTTATTAACGTTTCGTT 57.328 26.923 5.91 11.93 44.19 3.85
687 688 7.881516 AACACTTGTTATTAACGTTTCGTTC 57.118 32.000 5.91 0.00 41.91 3.95
688 689 6.906678 AACACTTGTTATTAACGTTTCGTTCC 59.093 34.615 5.91 0.00 41.91 3.62
689 690 7.939670 AACACTTGTTATTAACGTTTCGTTCCC 60.940 37.037 5.91 0.00 41.91 3.97
694 695 2.281276 ACGTTTCGTTCCCTGGCC 60.281 61.111 0.00 0.00 36.35 5.36
695 696 3.053896 CGTTTCGTTCCCTGGCCC 61.054 66.667 0.00 0.00 0.00 5.80
696 697 2.675423 GTTTCGTTCCCTGGCCCC 60.675 66.667 0.00 0.00 0.00 5.80
697 698 3.179339 TTTCGTTCCCTGGCCCCA 61.179 61.111 0.00 0.00 0.00 4.96
698 699 2.769120 TTTCGTTCCCTGGCCCCAA 61.769 57.895 0.00 0.00 0.00 4.12
699 700 2.299727 TTTCGTTCCCTGGCCCCAAA 62.300 55.000 0.00 0.00 0.00 3.28
700 701 2.037208 CGTTCCCTGGCCCCAAAT 59.963 61.111 0.00 0.00 0.00 2.32
701 702 1.208844 TCGTTCCCTGGCCCCAAATA 61.209 55.000 0.00 0.00 0.00 1.40
702 703 0.751643 CGTTCCCTGGCCCCAAATAG 60.752 60.000 0.00 0.00 0.00 1.73
703 704 0.335019 GTTCCCTGGCCCCAAATAGT 59.665 55.000 0.00 0.00 0.00 2.12
709 710 4.672650 TCCCTGGCCCCAAATAGTAATAAT 59.327 41.667 0.00 0.00 0.00 1.28
770 771 8.126700 CGTTGATGATAATTGTAAACTAACCCC 58.873 37.037 0.00 0.00 0.00 4.95
791 792 5.453198 CCCCCATCAATAATTAACCAGCAAC 60.453 44.000 0.00 0.00 0.00 4.17
1001 1007 3.908081 TACGCGCGATTCCCTCCC 61.908 66.667 39.36 0.00 0.00 4.30
1022 1030 4.610714 GCGATCCCCTCCGCCTTC 62.611 72.222 0.00 0.00 45.06 3.46
1052 1060 3.984749 GCCTCGCTCGATCCCCTC 61.985 72.222 0.00 0.00 0.00 4.30
1053 1061 3.299190 CCTCGCTCGATCCCCTCC 61.299 72.222 0.00 0.00 0.00 4.30
1054 1062 3.299190 CTCGCTCGATCCCCTCCC 61.299 72.222 0.00 0.00 0.00 4.30
1055 1063 4.916314 TCGCTCGATCCCCTCCCC 62.916 72.222 0.00 0.00 0.00 4.81
1067 1075 1.694525 CCTCCCCTCCCTTCCCTTC 60.695 68.421 0.00 0.00 0.00 3.46
1072 1080 2.066999 CCTCCCTTCCCTTCCTCCG 61.067 68.421 0.00 0.00 0.00 4.63
1074 1082 1.305887 TCCCTTCCCTTCCTCCGTC 60.306 63.158 0.00 0.00 0.00 4.79
1346 1354 2.444895 GTCATCTCTCCGCCCCCT 60.445 66.667 0.00 0.00 0.00 4.79
1347 1355 2.123251 TCATCTCTCCGCCCCCTC 60.123 66.667 0.00 0.00 0.00 4.30
1349 1357 4.565850 ATCTCTCCGCCCCCTCCC 62.566 72.222 0.00 0.00 0.00 4.30
1376 1384 2.729467 CGCGATCACGATCTAGGGATTC 60.729 54.545 0.00 0.00 42.66 2.52
1378 1386 2.820197 CGATCACGATCTAGGGATTCCA 59.180 50.000 4.80 0.00 42.66 3.53
1475 1483 9.561270 GTTCCAAATTAAGCTAATCTCTTTGAC 57.439 33.333 0.00 0.00 0.00 3.18
1485 1493 5.982516 GCTAATCTCTTTGACGATGATGTCT 59.017 40.000 0.00 0.00 39.64 3.41
1536 1544 1.951602 AGTACCCACGGTTGCTTTTTC 59.048 47.619 0.00 0.00 37.09 2.29
1553 1561 2.049077 TTCGCATCATTGTGTTGTGC 57.951 45.000 0.00 0.00 34.86 4.57
1598 1607 0.684479 GGAGGCCCTTGGAATTGGTC 60.684 60.000 0.00 0.00 0.00 4.02
1610 1619 2.098117 GGAATTGGTCGCAGAGAAATGG 59.902 50.000 0.00 0.00 36.95 3.16
1613 1622 1.078143 GGTCGCAGAGAAATGGGCT 60.078 57.895 0.00 0.00 36.95 5.19
1617 1626 0.659957 CGCAGAGAAATGGGCTAAGC 59.340 55.000 0.00 0.00 0.00 3.09
1657 1666 7.095060 GCAGTGTCAACTTTAAATCAGATCTGA 60.095 37.037 27.03 27.03 38.15 3.27
1672 1681 4.677378 CAGATCTGACTTTTATAGCGTCCG 59.323 45.833 18.34 0.00 0.00 4.79
1769 1779 7.913789 ACTATGGGAATTGTCTACAGTTTGTA 58.086 34.615 0.00 0.00 0.00 2.41
1770 1780 8.380099 ACTATGGGAATTGTCTACAGTTTGTAA 58.620 33.333 0.00 0.00 31.67 2.41
1776 1786 6.780706 ATTGTCTACAGTTTGTAAGTTCCG 57.219 37.500 0.00 0.00 31.67 4.30
1781 1791 3.275999 ACAGTTTGTAAGTTCCGTGCTT 58.724 40.909 0.00 0.00 0.00 3.91
1799 1809 5.332656 CGTGCTTCTTTCTCAGTAGTTTCAC 60.333 44.000 0.00 0.00 0.00 3.18
1800 1810 5.755861 GTGCTTCTTTCTCAGTAGTTTCACT 59.244 40.000 0.00 0.00 0.00 3.41
1856 1866 5.391312 AGTTATGCAGGACATTTGGTTTC 57.609 39.130 0.00 0.00 40.38 2.78
1886 1896 3.569701 ACTTGAATTTGAATGGCTGACGT 59.430 39.130 0.00 0.00 0.00 4.34
1913 1923 0.456995 GGAGCGTCTGAGCACTGTAC 60.457 60.000 0.00 0.00 40.15 2.90
1924 1934 7.038659 GTCTGAGCACTGTACTCTCATAATTT 58.961 38.462 9.32 0.00 36.41 1.82
1932 1942 9.987272 CACTGTACTCTCATAATTTATGGATCA 57.013 33.333 14.80 9.84 36.81 2.92
1940 1950 9.857656 TCTCATAATTTATGGATCAGAGCTTTT 57.142 29.630 14.80 0.00 36.81 2.27
1947 1957 7.707624 TTATGGATCAGAGCTTTTGATGTTT 57.292 32.000 16.59 6.17 35.50 2.83
1955 1965 6.148976 TCAGAGCTTTTGATGTTTCATCTCTG 59.851 38.462 10.40 12.12 39.93 3.35
1962 1972 4.259356 TGATGTTTCATCTCTGGAAGCAG 58.741 43.478 10.40 0.00 38.56 4.24
2005 2015 8.986991 AGAGGTTCTTGATCAATCTATTACACT 58.013 33.333 8.96 0.00 0.00 3.55
2085 2095 9.352191 TCTCATATTTAGGAACAGAGGTAGTAC 57.648 37.037 0.00 0.00 0.00 2.73
2086 2096 9.132923 CTCATATTTAGGAACAGAGGTAGTACA 57.867 37.037 2.06 0.00 0.00 2.90
2087 2097 9.656323 TCATATTTAGGAACAGAGGTAGTACAT 57.344 33.333 2.06 0.00 0.00 2.29
2088 2098 9.915629 CATATTTAGGAACAGAGGTAGTACATC 57.084 37.037 6.86 6.86 0.00 3.06
2089 2099 9.884814 ATATTTAGGAACAGAGGTAGTACATCT 57.115 33.333 11.62 11.62 40.21 2.90
2090 2100 8.611051 ATTTAGGAACAGAGGTAGTACATCTT 57.389 34.615 14.61 1.81 37.10 2.40
2091 2101 9.710818 ATTTAGGAACAGAGGTAGTACATCTTA 57.289 33.333 14.61 2.37 37.10 2.10
2092 2102 9.537852 TTTAGGAACAGAGGTAGTACATCTTAA 57.462 33.333 14.61 8.07 37.10 1.85
2093 2103 9.537852 TTAGGAACAGAGGTAGTACATCTTAAA 57.462 33.333 14.61 1.63 37.10 1.52
2094 2104 8.431910 AGGAACAGAGGTAGTACATCTTAAAA 57.568 34.615 14.61 0.00 37.10 1.52
2095 2105 9.047947 AGGAACAGAGGTAGTACATCTTAAAAT 57.952 33.333 14.61 0.41 37.10 1.82
2130 2140 8.622948 ACTTTTATGTTTAAGGAGAACAGAGG 57.377 34.615 0.00 0.00 40.04 3.69
2131 2141 8.218488 ACTTTTATGTTTAAGGAGAACAGAGGT 58.782 33.333 0.00 0.00 40.04 3.85
2132 2142 9.720769 CTTTTATGTTTAAGGAGAACAGAGGTA 57.279 33.333 0.00 0.00 40.04 3.08
2133 2143 9.720769 TTTTATGTTTAAGGAGAACAGAGGTAG 57.279 33.333 0.00 0.00 40.04 3.18
2134 2144 6.936968 ATGTTTAAGGAGAACAGAGGTAGT 57.063 37.500 0.00 0.00 40.04 2.73
2135 2145 9.537852 TTATGTTTAAGGAGAACAGAGGTAGTA 57.462 33.333 0.00 0.00 40.04 1.82
2194 2204 7.806180 AGGAGCTGTTTAATTCTACCATGTAT 58.194 34.615 0.00 0.00 0.00 2.29
2227 2237 2.100584 CTCCAGCATAGTCAGACCTCAC 59.899 54.545 0.00 0.00 0.00 3.51
2259 2269 1.098869 TTGCACGGACTTTTTCTGCA 58.901 45.000 0.00 0.00 36.08 4.41
2316 2335 5.482006 CATGTCCATGTCTCTGACAAGTTA 58.518 41.667 4.46 0.00 45.96 2.24
2363 2386 7.214467 TGTTCCATTTCTTTGAGGTATTGTC 57.786 36.000 0.00 0.00 0.00 3.18
2609 2632 2.592102 ACCATGCTGACTCCAACATT 57.408 45.000 0.00 0.00 27.30 2.71
2615 2638 3.076621 TGCTGACTCCAACATTGTCATC 58.923 45.455 0.00 0.00 39.55 2.92
2663 2686 1.507140 ACCACCTGAGGTCAGTTCAA 58.493 50.000 0.00 0.00 42.27 2.69
2870 2893 3.317149 CCATCAATGTTGCCGATTCATCT 59.683 43.478 0.00 0.00 0.00 2.90
2878 2901 0.099436 GCCGATTCATCTGGCAACAC 59.901 55.000 14.14 0.00 46.17 3.32
2879 2902 1.452110 CCGATTCATCTGGCAACACA 58.548 50.000 0.00 0.00 46.17 3.72
2961 2984 1.227556 ACATGGATCTTACGGCGCC 60.228 57.895 19.07 19.07 0.00 6.53
2990 3013 2.042162 TCTAGGTGTTAGTTCGGTCCCT 59.958 50.000 0.00 0.00 0.00 4.20
3140 3164 6.209589 TCAGACTTACTACAGTTTCAGAGCAT 59.790 38.462 0.00 0.00 0.00 3.79
3156 3180 7.707624 TCAGAGCATTATCATGTTTCCTTTT 57.292 32.000 0.00 0.00 32.28 2.27
3162 3186 8.903820 AGCATTATCATGTTTCCTTTTAGGTAC 58.096 33.333 0.00 0.00 32.88 3.34
3187 3211 5.070001 TGTTTGTCCTCCTAAGACATTTGG 58.930 41.667 0.00 0.00 43.46 3.28
3219 3243 1.750399 CGGAGCAGGAACAATGGGG 60.750 63.158 0.00 0.00 0.00 4.96
3220 3244 1.380380 GGAGCAGGAACAATGGGGG 60.380 63.158 0.00 0.00 0.00 5.40
3221 3245 1.384191 GAGCAGGAACAATGGGGGT 59.616 57.895 0.00 0.00 0.00 4.95
3225 3249 2.443255 AGCAGGAACAATGGGGGTATAG 59.557 50.000 0.00 0.00 0.00 1.31
3230 3254 6.157994 GCAGGAACAATGGGGGTATAGATATA 59.842 42.308 0.00 0.00 0.00 0.86
3266 3291 7.531857 TTTGTTATATGTGGATTGTGGTGTT 57.468 32.000 0.00 0.00 0.00 3.32
3278 3303 5.882557 GGATTGTGGTGTTATCTGAACATCT 59.117 40.000 2.67 0.00 32.68 2.90
3303 3328 4.469657 TGTCCTACAAAAGGCATCTTGTT 58.530 39.130 0.00 0.00 46.10 2.83
3352 3377 4.629200 CAGCTCATCTGTTCCTCTTTGTAC 59.371 45.833 0.00 0.00 38.02 2.90
3409 3471 3.124297 GCTTGATCTACACTGTTCTGCAC 59.876 47.826 0.00 0.00 0.00 4.57
3411 3473 4.607293 TGATCTACACTGTTCTGCACTT 57.393 40.909 0.00 0.00 0.00 3.16
3434 3496 4.515944 TGGATTGGTCGTTTTCGTGTAATT 59.484 37.500 0.00 0.00 44.46 1.40
3452 3514 1.408969 TTTGGGCCTCCAGTTTGTTC 58.591 50.000 4.53 0.00 45.04 3.18
3455 3517 1.515521 GGGCCTCCAGTTTGTTCGTG 61.516 60.000 0.84 0.00 0.00 4.35
3462 3524 4.992319 CCTCCAGTTTGTTCGTGTAATGTA 59.008 41.667 0.00 0.00 0.00 2.29
3493 3557 3.007940 TCAGTTCCAAGATATATGCCCCG 59.992 47.826 0.00 0.00 0.00 5.73
3514 3578 1.130561 GATTACCGGAACAGCAGCAAC 59.869 52.381 9.46 0.00 0.00 4.17
3581 3645 3.487544 GCTATCCGAACATCTTGCAAACC 60.488 47.826 0.00 0.00 0.00 3.27
3682 3748 6.176183 AGCTACACTGTTCTGCATTCTAATT 58.824 36.000 0.00 0.00 0.00 1.40
3702 3768 2.503331 TGCATGGGTTTCTGTAGTGTG 58.497 47.619 0.00 0.00 0.00 3.82
3708 3774 2.561569 GGTTTCTGTAGTGTGCAGTGT 58.438 47.619 0.00 0.00 35.60 3.55
3814 3880 3.925379 TGCATTGTCAGTACAGTACAGG 58.075 45.455 13.37 4.93 36.83 4.00
3815 3881 2.673368 GCATTGTCAGTACAGTACAGGC 59.327 50.000 13.37 7.12 36.83 4.85
3858 3929 6.432107 TCGTGCTTGTATTTCAACCTTAAAC 58.568 36.000 0.00 0.00 32.18 2.01
3860 3931 5.924254 GTGCTTGTATTTCAACCTTAAACCC 59.076 40.000 0.00 0.00 32.18 4.11
3888 3959 4.594920 TGAACTTTCAGTCCCTTCATCTCT 59.405 41.667 0.00 0.00 32.50 3.10
3917 3988 1.097232 CCATCTTTTCATGCTCGGCA 58.903 50.000 1.01 1.01 44.86 5.69
3928 3999 1.599240 GCTCGGCAGATCCATTCCC 60.599 63.158 0.00 0.00 34.01 3.97
3943 4014 3.192922 CCCCGACGTTTCATCGCC 61.193 66.667 0.00 0.00 38.27 5.54
3982 4053 3.504863 CAAAAGATTGTTCAGATGCCCG 58.495 45.455 0.00 0.00 0.00 6.13
4011 4082 2.836372 AGACATCAGCCATCAGACTGAA 59.164 45.455 9.70 0.00 45.49 3.02
4024 4097 2.945008 CAGACTGAAGACCACTGCAAAA 59.055 45.455 0.00 0.00 30.37 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.234896 ATTGCATCCATCCCACACAA 57.765 45.000 0.00 0.00 0.00 3.33
1 2 2.234896 AATTGCATCCATCCCACACA 57.765 45.000 0.00 0.00 0.00 3.72
2 3 3.615224 AAAATTGCATCCATCCCACAC 57.385 42.857 0.00 0.00 0.00 3.82
3 4 3.307550 CCAAAAATTGCATCCATCCCACA 60.308 43.478 0.00 0.00 0.00 4.17
4 5 3.272581 CCAAAAATTGCATCCATCCCAC 58.727 45.455 0.00 0.00 0.00 4.61
5 6 2.911636 ACCAAAAATTGCATCCATCCCA 59.088 40.909 0.00 0.00 0.00 4.37
6 7 3.272581 CACCAAAAATTGCATCCATCCC 58.727 45.455 0.00 0.00 0.00 3.85
7 8 3.934579 GACACCAAAAATTGCATCCATCC 59.065 43.478 0.00 0.00 0.00 3.51
8 9 3.934579 GGACACCAAAAATTGCATCCATC 59.065 43.478 0.00 0.00 0.00 3.51
9 10 3.327172 TGGACACCAAAAATTGCATCCAT 59.673 39.130 0.00 0.00 32.74 3.41
10 11 2.702478 TGGACACCAAAAATTGCATCCA 59.298 40.909 0.00 0.00 34.24 3.41
11 12 3.399440 TGGACACCAAAAATTGCATCC 57.601 42.857 0.00 0.00 0.00 3.51
12 13 4.824289 AGATGGACACCAAAAATTGCATC 58.176 39.130 0.00 0.00 36.95 3.91
13 14 4.895668 AGATGGACACCAAAAATTGCAT 57.104 36.364 0.00 0.00 36.95 3.96
14 15 5.999205 ATAGATGGACACCAAAAATTGCA 57.001 34.783 0.00 0.00 36.95 4.08
15 16 6.397272 TCAATAGATGGACACCAAAAATTGC 58.603 36.000 0.00 0.00 36.95 3.56
16 17 9.740239 CTATCAATAGATGGACACCAAAAATTG 57.260 33.333 0.00 0.00 36.95 2.32
17 18 9.699410 TCTATCAATAGATGGACACCAAAAATT 57.301 29.630 0.00 0.00 36.90 1.82
18 19 9.699410 TTCTATCAATAGATGGACACCAAAAAT 57.301 29.630 0.72 0.00 40.87 1.82
19 20 8.956426 GTTCTATCAATAGATGGACACCAAAAA 58.044 33.333 0.72 0.00 40.87 1.94
20 21 7.279981 CGTTCTATCAATAGATGGACACCAAAA 59.720 37.037 0.72 0.00 40.87 2.44
21 22 6.761242 CGTTCTATCAATAGATGGACACCAAA 59.239 38.462 0.72 0.00 40.87 3.28
22 23 6.097696 TCGTTCTATCAATAGATGGACACCAA 59.902 38.462 0.72 0.00 40.87 3.67
23 24 5.596772 TCGTTCTATCAATAGATGGACACCA 59.403 40.000 0.72 0.00 40.87 4.17
24 25 6.085555 TCGTTCTATCAATAGATGGACACC 57.914 41.667 0.72 0.00 40.87 4.16
25 26 8.594881 ATTTCGTTCTATCAATAGATGGACAC 57.405 34.615 0.72 0.00 40.87 3.67
26 27 9.613428 AAATTTCGTTCTATCAATAGATGGACA 57.387 29.630 0.72 0.00 40.87 4.02
27 28 9.869844 CAAATTTCGTTCTATCAATAGATGGAC 57.130 33.333 0.72 0.00 40.87 4.02
28 29 9.830975 TCAAATTTCGTTCTATCAATAGATGGA 57.169 29.630 0.72 0.00 39.63 3.41
39 40 9.823647 ACAGACATCTATCAAATTTCGTTCTAT 57.176 29.630 0.00 0.00 0.00 1.98
40 41 9.087424 CACAGACATCTATCAAATTTCGTTCTA 57.913 33.333 0.00 0.00 0.00 2.10
41 42 7.413438 GCACAGACATCTATCAAATTTCGTTCT 60.413 37.037 0.00 0.00 0.00 3.01
42 43 6.684555 GCACAGACATCTATCAAATTTCGTTC 59.315 38.462 0.00 0.00 0.00 3.95
43 44 6.149308 TGCACAGACATCTATCAAATTTCGTT 59.851 34.615 0.00 0.00 0.00 3.85
44 45 5.643348 TGCACAGACATCTATCAAATTTCGT 59.357 36.000 0.00 0.00 0.00 3.85
45 46 5.961843 GTGCACAGACATCTATCAAATTTCG 59.038 40.000 13.17 0.00 0.00 3.46
46 47 7.081526 AGTGCACAGACATCTATCAAATTTC 57.918 36.000 21.04 0.00 0.00 2.17
47 48 7.040201 ACAAGTGCACAGACATCTATCAAATTT 60.040 33.333 21.04 0.00 0.00 1.82
48 49 6.432162 ACAAGTGCACAGACATCTATCAAATT 59.568 34.615 21.04 0.00 0.00 1.82
49 50 5.942236 ACAAGTGCACAGACATCTATCAAAT 59.058 36.000 21.04 0.00 0.00 2.32
50 51 5.308014 ACAAGTGCACAGACATCTATCAAA 58.692 37.500 21.04 0.00 0.00 2.69
51 52 4.898320 ACAAGTGCACAGACATCTATCAA 58.102 39.130 21.04 0.00 0.00 2.57
52 53 4.541973 ACAAGTGCACAGACATCTATCA 57.458 40.909 21.04 0.00 0.00 2.15
53 54 5.213913 CAACAAGTGCACAGACATCTATC 57.786 43.478 21.04 0.00 0.00 2.08
71 72 6.715347 TCTCTAGCATCTATTGTAGCAACA 57.285 37.500 0.00 0.00 0.00 3.33
72 73 6.090628 GCATCTCTAGCATCTATTGTAGCAAC 59.909 42.308 0.00 0.00 0.00 4.17
73 74 6.162079 GCATCTCTAGCATCTATTGTAGCAA 58.838 40.000 0.00 0.00 0.00 3.91
74 75 5.620879 CGCATCTCTAGCATCTATTGTAGCA 60.621 44.000 0.00 0.00 0.00 3.49
75 76 4.797868 CGCATCTCTAGCATCTATTGTAGC 59.202 45.833 0.00 0.00 0.00 3.58
76 77 6.188400 TCGCATCTCTAGCATCTATTGTAG 57.812 41.667 0.00 0.00 0.00 2.74
77 78 6.765915 ATCGCATCTCTAGCATCTATTGTA 57.234 37.500 0.00 0.00 0.00 2.41
78 79 5.657826 ATCGCATCTCTAGCATCTATTGT 57.342 39.130 0.00 0.00 0.00 2.71
79 80 7.479150 TCTAATCGCATCTCTAGCATCTATTG 58.521 38.462 0.00 0.00 0.00 1.90
80 81 7.637631 TCTAATCGCATCTCTAGCATCTATT 57.362 36.000 0.00 0.00 0.00 1.73
81 82 7.650890 CATCTAATCGCATCTCTAGCATCTAT 58.349 38.462 0.00 0.00 0.00 1.98
82 83 6.459435 GCATCTAATCGCATCTCTAGCATCTA 60.459 42.308 0.00 0.00 0.00 1.98
83 84 5.679382 GCATCTAATCGCATCTCTAGCATCT 60.679 44.000 0.00 0.00 0.00 2.90
84 85 4.503734 GCATCTAATCGCATCTCTAGCATC 59.496 45.833 0.00 0.00 0.00 3.91
85 86 4.081807 TGCATCTAATCGCATCTCTAGCAT 60.082 41.667 0.00 0.00 31.95 3.79
86 87 3.256631 TGCATCTAATCGCATCTCTAGCA 59.743 43.478 0.00 0.00 31.95 3.49
87 88 3.842820 TGCATCTAATCGCATCTCTAGC 58.157 45.455 0.00 0.00 31.95 3.42
88 89 6.155136 TCTTTGCATCTAATCGCATCTCTAG 58.845 40.000 0.00 0.00 38.10 2.43
89 90 6.089249 TCTTTGCATCTAATCGCATCTCTA 57.911 37.500 0.00 0.00 38.10 2.43
90 91 4.953667 TCTTTGCATCTAATCGCATCTCT 58.046 39.130 0.00 0.00 38.10 3.10
91 92 5.663795 TTCTTTGCATCTAATCGCATCTC 57.336 39.130 0.00 0.00 38.10 2.75
92 93 4.024218 GCTTCTTTGCATCTAATCGCATCT 60.024 41.667 0.00 0.00 38.10 2.90
93 94 4.217497 GCTTCTTTGCATCTAATCGCATC 58.783 43.478 0.00 0.00 38.10 3.91
94 95 3.628942 TGCTTCTTTGCATCTAATCGCAT 59.371 39.130 0.00 0.00 38.10 4.73
95 96 3.009026 TGCTTCTTTGCATCTAATCGCA 58.991 40.909 0.00 0.00 38.12 5.10
96 97 3.680642 TGCTTCTTTGCATCTAATCGC 57.319 42.857 0.00 0.00 38.12 4.58
97 98 4.024438 CGTTGCTTCTTTGCATCTAATCG 58.976 43.478 0.00 0.00 42.96 3.34
98 99 4.974591 ACGTTGCTTCTTTGCATCTAATC 58.025 39.130 0.00 0.00 42.96 1.75
99 100 4.697352 AGACGTTGCTTCTTTGCATCTAAT 59.303 37.500 0.00 0.00 42.96 1.73
100 101 4.065088 AGACGTTGCTTCTTTGCATCTAA 58.935 39.130 0.00 0.00 42.96 2.10
101 102 3.664107 AGACGTTGCTTCTTTGCATCTA 58.336 40.909 0.00 0.00 42.96 1.98
102 103 2.498167 AGACGTTGCTTCTTTGCATCT 58.502 42.857 0.00 0.00 42.96 2.90
103 104 2.977405 AGACGTTGCTTCTTTGCATC 57.023 45.000 0.00 0.00 42.96 3.91
104 105 3.403038 AGTAGACGTTGCTTCTTTGCAT 58.597 40.909 0.00 0.00 42.96 3.96
105 106 2.833794 AGTAGACGTTGCTTCTTTGCA 58.166 42.857 0.00 0.00 41.65 4.08
106 107 3.800163 GAAGTAGACGTTGCTTCTTTGC 58.200 45.455 15.71 0.00 42.99 3.68
111 112 6.378757 GTCTAAAGAAGTAGACGTTGCTTC 57.621 41.667 15.41 15.41 45.62 3.86
125 126 9.765795 ATTTCTTTCTTCTTCGAGTCTAAAGAA 57.234 29.630 15.07 15.07 38.81 2.52
129 130 9.088512 GCATATTTCTTTCTTCTTCGAGTCTAA 57.911 33.333 0.00 0.00 0.00 2.10
130 131 8.251026 TGCATATTTCTTTCTTCTTCGAGTCTA 58.749 33.333 0.00 0.00 0.00 2.59
131 132 7.099764 TGCATATTTCTTTCTTCTTCGAGTCT 58.900 34.615 0.00 0.00 0.00 3.24
132 133 7.295952 TGCATATTTCTTTCTTCTTCGAGTC 57.704 36.000 0.00 0.00 0.00 3.36
133 134 7.604164 TCTTGCATATTTCTTTCTTCTTCGAGT 59.396 33.333 0.00 0.00 0.00 4.18
134 135 7.968246 TCTTGCATATTTCTTTCTTCTTCGAG 58.032 34.615 0.00 0.00 0.00 4.04
135 136 7.905604 TCTTGCATATTTCTTTCTTCTTCGA 57.094 32.000 0.00 0.00 0.00 3.71
136 137 7.642978 CCATCTTGCATATTTCTTTCTTCTTCG 59.357 37.037 0.00 0.00 0.00 3.79
137 138 8.680903 TCCATCTTGCATATTTCTTTCTTCTTC 58.319 33.333 0.00 0.00 0.00 2.87
138 139 8.585471 TCCATCTTGCATATTTCTTTCTTCTT 57.415 30.769 0.00 0.00 0.00 2.52
139 140 8.051535 TCTCCATCTTGCATATTTCTTTCTTCT 58.948 33.333 0.00 0.00 0.00 2.85
140 141 8.218338 TCTCCATCTTGCATATTTCTTTCTTC 57.782 34.615 0.00 0.00 0.00 2.87
141 142 8.585471 TTCTCCATCTTGCATATTTCTTTCTT 57.415 30.769 0.00 0.00 0.00 2.52
142 143 8.763984 ATTCTCCATCTTGCATATTTCTTTCT 57.236 30.769 0.00 0.00 0.00 2.52
143 144 9.460906 GAATTCTCCATCTTGCATATTTCTTTC 57.539 33.333 0.00 0.00 0.00 2.62
144 145 8.133627 CGAATTCTCCATCTTGCATATTTCTTT 58.866 33.333 3.52 0.00 0.00 2.52
145 146 7.284034 ACGAATTCTCCATCTTGCATATTTCTT 59.716 33.333 3.52 0.00 0.00 2.52
146 147 6.769822 ACGAATTCTCCATCTTGCATATTTCT 59.230 34.615 3.52 0.00 0.00 2.52
147 148 6.963796 ACGAATTCTCCATCTTGCATATTTC 58.036 36.000 3.52 0.00 0.00 2.17
148 149 6.949352 ACGAATTCTCCATCTTGCATATTT 57.051 33.333 3.52 0.00 0.00 1.40
149 150 7.445121 TCTACGAATTCTCCATCTTGCATATT 58.555 34.615 3.52 0.00 0.00 1.28
150 151 6.997655 TCTACGAATTCTCCATCTTGCATAT 58.002 36.000 3.52 0.00 0.00 1.78
151 152 6.405278 TCTACGAATTCTCCATCTTGCATA 57.595 37.500 3.52 0.00 0.00 3.14
152 153 5.282055 TCTACGAATTCTCCATCTTGCAT 57.718 39.130 3.52 0.00 0.00 3.96
153 154 4.736126 TCTACGAATTCTCCATCTTGCA 57.264 40.909 3.52 0.00 0.00 4.08
154 155 5.292765 TGATCTACGAATTCTCCATCTTGC 58.707 41.667 3.52 0.00 0.00 4.01
155 156 6.758416 TGTTGATCTACGAATTCTCCATCTTG 59.242 38.462 3.52 0.00 0.00 3.02
156 157 6.878317 TGTTGATCTACGAATTCTCCATCTT 58.122 36.000 3.52 0.00 0.00 2.40
157 158 6.471233 TGTTGATCTACGAATTCTCCATCT 57.529 37.500 3.52 0.00 0.00 2.90
158 159 6.291849 CGTTGTTGATCTACGAATTCTCCATC 60.292 42.308 3.52 0.99 45.09 3.51
159 160 5.520288 CGTTGTTGATCTACGAATTCTCCAT 59.480 40.000 3.52 0.00 45.09 3.41
160 161 4.862574 CGTTGTTGATCTACGAATTCTCCA 59.137 41.667 3.52 0.00 45.09 3.86
161 162 5.100259 TCGTTGTTGATCTACGAATTCTCC 58.900 41.667 3.52 0.00 46.88 3.71
169 170 6.389622 TGATTCTTTCGTTGTTGATCTACG 57.610 37.500 2.86 3.85 44.05 3.51
170 171 7.572759 TGTTGATTCTTTCGTTGTTGATCTAC 58.427 34.615 0.00 0.00 0.00 2.59
171 172 7.722795 TGTTGATTCTTTCGTTGTTGATCTA 57.277 32.000 0.00 0.00 0.00 1.98
172 173 6.618287 TGTTGATTCTTTCGTTGTTGATCT 57.382 33.333 0.00 0.00 0.00 2.75
173 174 7.132213 TCTTGTTGATTCTTTCGTTGTTGATC 58.868 34.615 0.00 0.00 0.00 2.92
174 175 7.026631 TCTTGTTGATTCTTTCGTTGTTGAT 57.973 32.000 0.00 0.00 0.00 2.57
175 176 6.429791 TCTTGTTGATTCTTTCGTTGTTGA 57.570 33.333 0.00 0.00 0.00 3.18
176 177 8.070171 AGTATCTTGTTGATTCTTTCGTTGTTG 58.930 33.333 0.00 0.00 36.65 3.33
177 178 8.154649 AGTATCTTGTTGATTCTTTCGTTGTT 57.845 30.769 0.00 0.00 36.65 2.83
178 179 7.730364 AGTATCTTGTTGATTCTTTCGTTGT 57.270 32.000 0.00 0.00 36.65 3.32
181 182 9.099454 GGATTAGTATCTTGTTGATTCTTTCGT 57.901 33.333 0.00 0.00 35.06 3.85
182 183 9.098355 TGGATTAGTATCTTGTTGATTCTTTCG 57.902 33.333 0.00 0.00 35.06 3.46
185 186 9.965902 AGTTGGATTAGTATCTTGTTGATTCTT 57.034 29.630 0.00 0.00 35.06 2.52
189 190 9.823647 CAGTAGTTGGATTAGTATCTTGTTGAT 57.176 33.333 0.00 0.00 39.11 2.57
213 214 6.095377 GTCAAATTTCCATAACTGCTTCCAG 58.905 40.000 0.00 0.00 44.80 3.86
214 215 5.538053 TGTCAAATTTCCATAACTGCTTCCA 59.462 36.000 0.00 0.00 0.00 3.53
215 216 6.024552 TGTCAAATTTCCATAACTGCTTCC 57.975 37.500 0.00 0.00 0.00 3.46
216 217 7.542025 AGATGTCAAATTTCCATAACTGCTTC 58.458 34.615 0.00 0.00 0.00 3.86
217 218 7.472334 AGATGTCAAATTTCCATAACTGCTT 57.528 32.000 0.00 0.00 0.00 3.91
218 219 7.472334 AAGATGTCAAATTTCCATAACTGCT 57.528 32.000 0.00 0.00 0.00 4.24
219 220 8.538409 AAAAGATGTCAAATTTCCATAACTGC 57.462 30.769 0.00 0.00 0.00 4.40
236 237 9.665719 ACCACAAAAAGACATTTTAAAAGATGT 57.334 25.926 6.79 6.82 39.20 3.06
239 240 9.936759 AGAACCACAAAAAGACATTTTAAAAGA 57.063 25.926 6.79 0.00 39.20 2.52
242 243 9.495572 ACAAGAACCACAAAAAGACATTTTAAA 57.504 25.926 0.00 0.00 39.20 1.52
243 244 9.495572 AACAAGAACCACAAAAAGACATTTTAA 57.504 25.926 0.00 0.00 39.20 1.52
244 245 9.495572 AAACAAGAACCACAAAAAGACATTTTA 57.504 25.926 0.00 0.00 39.20 1.52
245 246 7.977789 AACAAGAACCACAAAAAGACATTTT 57.022 28.000 0.00 0.00 41.93 1.82
246 247 7.977789 AAACAAGAACCACAAAAAGACATTT 57.022 28.000 0.00 0.00 0.00 2.32
247 248 7.977789 AAAACAAGAACCACAAAAAGACATT 57.022 28.000 0.00 0.00 0.00 2.71
248 249 7.877612 AGAAAAACAAGAACCACAAAAAGACAT 59.122 29.630 0.00 0.00 0.00 3.06
249 250 7.213678 AGAAAAACAAGAACCACAAAAAGACA 58.786 30.769 0.00 0.00 0.00 3.41
250 251 7.652300 AGAAAAACAAGAACCACAAAAAGAC 57.348 32.000 0.00 0.00 0.00 3.01
251 252 8.669946 AAAGAAAAACAAGAACCACAAAAAGA 57.330 26.923 0.00 0.00 0.00 2.52
253 254 9.549078 ACTAAAGAAAAACAAGAACCACAAAAA 57.451 25.926 0.00 0.00 0.00 1.94
254 255 9.198837 GACTAAAGAAAAACAAGAACCACAAAA 57.801 29.630 0.00 0.00 0.00 2.44
255 256 8.581578 AGACTAAAGAAAAACAAGAACCACAAA 58.418 29.630 0.00 0.00 0.00 2.83
256 257 8.117813 AGACTAAAGAAAAACAAGAACCACAA 57.882 30.769 0.00 0.00 0.00 3.33
257 258 7.696992 AGACTAAAGAAAAACAAGAACCACA 57.303 32.000 0.00 0.00 0.00 4.17
258 259 9.499585 GTAAGACTAAAGAAAAACAAGAACCAC 57.500 33.333 0.00 0.00 0.00 4.16
259 260 9.457436 AGTAAGACTAAAGAAAAACAAGAACCA 57.543 29.630 0.00 0.00 0.00 3.67
319 320 6.009115 ACTTCATCAACGGTTTTTGGATAC 57.991 37.500 0.00 0.00 0.00 2.24
320 321 7.747155 TTACTTCATCAACGGTTTTTGGATA 57.253 32.000 0.00 0.00 0.00 2.59
321 322 6.642707 TTACTTCATCAACGGTTTTTGGAT 57.357 33.333 0.00 0.00 0.00 3.41
322 323 6.642707 ATTACTTCATCAACGGTTTTTGGA 57.357 33.333 0.00 0.00 0.00 3.53
323 324 8.240682 TCATATTACTTCATCAACGGTTTTTGG 58.759 33.333 0.00 0.00 0.00 3.28
324 325 9.619316 TTCATATTACTTCATCAACGGTTTTTG 57.381 29.630 0.00 0.00 0.00 2.44
327 328 9.787532 CATTTCATATTACTTCATCAACGGTTT 57.212 29.630 0.00 0.00 0.00 3.27
328 329 9.173021 TCATTTCATATTACTTCATCAACGGTT 57.827 29.630 0.00 0.00 0.00 4.44
329 330 8.731275 TCATTTCATATTACTTCATCAACGGT 57.269 30.769 0.00 0.00 0.00 4.83
330 331 8.285394 CCTCATTTCATATTACTTCATCAACGG 58.715 37.037 0.00 0.00 0.00 4.44
331 332 7.800380 GCCTCATTTCATATTACTTCATCAACG 59.200 37.037 0.00 0.00 0.00 4.10
332 333 7.800380 CGCCTCATTTCATATTACTTCATCAAC 59.200 37.037 0.00 0.00 0.00 3.18
333 334 7.714813 TCGCCTCATTTCATATTACTTCATCAA 59.285 33.333 0.00 0.00 0.00 2.57
334 335 7.216494 TCGCCTCATTTCATATTACTTCATCA 58.784 34.615 0.00 0.00 0.00 3.07
335 336 7.658179 TCGCCTCATTTCATATTACTTCATC 57.342 36.000 0.00 0.00 0.00 2.92
336 337 8.450578 TTTCGCCTCATTTCATATTACTTCAT 57.549 30.769 0.00 0.00 0.00 2.57
337 338 7.857734 TTTCGCCTCATTTCATATTACTTCA 57.142 32.000 0.00 0.00 0.00 3.02
360 361 4.143115 CGCATCTCGTCCGCATATATTTTT 60.143 41.667 0.00 0.00 0.00 1.94
361 362 3.367932 CGCATCTCGTCCGCATATATTTT 59.632 43.478 0.00 0.00 0.00 1.82
362 363 2.923655 CGCATCTCGTCCGCATATATTT 59.076 45.455 0.00 0.00 0.00 1.40
363 364 2.530177 CGCATCTCGTCCGCATATATT 58.470 47.619 0.00 0.00 0.00 1.28
364 365 1.202302 CCGCATCTCGTCCGCATATAT 60.202 52.381 0.00 0.00 36.19 0.86
365 366 0.170339 CCGCATCTCGTCCGCATATA 59.830 55.000 0.00 0.00 36.19 0.86
366 367 1.080501 CCGCATCTCGTCCGCATAT 60.081 57.895 0.00 0.00 36.19 1.78
367 368 2.335011 CCGCATCTCGTCCGCATA 59.665 61.111 0.00 0.00 36.19 3.14
371 372 4.812476 TTGGCCGCATCTCGTCCG 62.812 66.667 0.00 0.00 39.46 4.79
372 373 2.650813 ATCTTGGCCGCATCTCGTCC 62.651 60.000 0.00 0.00 36.61 4.79
373 374 1.227380 ATCTTGGCCGCATCTCGTC 60.227 57.895 0.00 0.00 36.19 4.20
374 375 1.522355 CATCTTGGCCGCATCTCGT 60.522 57.895 0.00 0.00 36.19 4.18
375 376 1.220169 CTCATCTTGGCCGCATCTCG 61.220 60.000 0.00 0.00 38.08 4.04
376 377 0.883814 CCTCATCTTGGCCGCATCTC 60.884 60.000 0.00 0.00 0.00 2.75
377 378 1.147824 CCTCATCTTGGCCGCATCT 59.852 57.895 0.00 0.00 0.00 2.90
378 379 2.550101 GCCTCATCTTGGCCGCATC 61.550 63.158 0.00 0.00 44.32 3.91
379 380 2.517875 GCCTCATCTTGGCCGCAT 60.518 61.111 0.00 0.00 44.32 4.73
416 417 1.057636 TTCAGATTTGTCGACGCGTC 58.942 50.000 28.96 28.96 0.00 5.19
417 418 1.390123 CATTCAGATTTGTCGACGCGT 59.610 47.619 13.85 13.85 0.00 6.01
418 419 1.267038 CCATTCAGATTTGTCGACGCG 60.267 52.381 11.62 3.53 0.00 6.01
419 420 1.999735 TCCATTCAGATTTGTCGACGC 59.000 47.619 11.62 0.15 0.00 5.19
420 421 2.993220 TGTCCATTCAGATTTGTCGACG 59.007 45.455 11.62 0.00 0.00 5.12
421 422 3.125316 GGTGTCCATTCAGATTTGTCGAC 59.875 47.826 9.11 9.11 0.00 4.20
422 423 3.334691 GGTGTCCATTCAGATTTGTCGA 58.665 45.455 0.00 0.00 0.00 4.20
423 424 2.094258 CGGTGTCCATTCAGATTTGTCG 59.906 50.000 0.00 0.00 0.00 4.35
424 425 2.159517 GCGGTGTCCATTCAGATTTGTC 60.160 50.000 0.00 0.00 0.00 3.18
425 426 1.812571 GCGGTGTCCATTCAGATTTGT 59.187 47.619 0.00 0.00 0.00 2.83
426 427 1.133025 GGCGGTGTCCATTCAGATTTG 59.867 52.381 0.00 0.00 0.00 2.32
427 428 1.004745 AGGCGGTGTCCATTCAGATTT 59.995 47.619 0.00 0.00 0.00 2.17
428 429 0.620556 AGGCGGTGTCCATTCAGATT 59.379 50.000 0.00 0.00 0.00 2.40
429 430 0.179000 GAGGCGGTGTCCATTCAGAT 59.821 55.000 0.00 0.00 0.00 2.90
430 431 1.191489 TGAGGCGGTGTCCATTCAGA 61.191 55.000 0.00 0.00 0.00 3.27
431 432 0.107508 ATGAGGCGGTGTCCATTCAG 60.108 55.000 0.00 0.00 0.00 3.02
432 433 0.327924 AATGAGGCGGTGTCCATTCA 59.672 50.000 0.00 0.00 0.00 2.57
433 434 0.734889 CAATGAGGCGGTGTCCATTC 59.265 55.000 0.00 0.00 0.00 2.67
434 435 0.038166 ACAATGAGGCGGTGTCCATT 59.962 50.000 0.00 0.00 0.00 3.16
435 436 0.392998 GACAATGAGGCGGTGTCCAT 60.393 55.000 0.00 0.00 36.48 3.41
436 437 1.003839 GACAATGAGGCGGTGTCCA 60.004 57.895 0.00 0.00 36.48 4.02
437 438 0.392998 ATGACAATGAGGCGGTGTCC 60.393 55.000 9.36 0.00 40.79 4.02
438 439 1.009829 GATGACAATGAGGCGGTGTC 58.990 55.000 6.11 6.11 41.66 3.67
439 440 0.615331 AGATGACAATGAGGCGGTGT 59.385 50.000 0.00 0.00 0.00 4.16
440 441 1.134580 AGAGATGACAATGAGGCGGTG 60.135 52.381 0.00 0.00 0.00 4.94
441 442 1.198713 AGAGATGACAATGAGGCGGT 58.801 50.000 0.00 0.00 0.00 5.68
442 443 3.459232 TTAGAGATGACAATGAGGCGG 57.541 47.619 0.00 0.00 0.00 6.13
443 444 4.183865 TGTTTAGAGATGACAATGAGGCG 58.816 43.478 0.00 0.00 0.00 5.52
444 445 5.293079 GTCTGTTTAGAGATGACAATGAGGC 59.707 44.000 0.00 0.00 32.48 4.70
445 446 6.401394 TGTCTGTTTAGAGATGACAATGAGG 58.599 40.000 0.00 0.00 35.15 3.86
446 447 7.895975 TTGTCTGTTTAGAGATGACAATGAG 57.104 36.000 0.00 0.00 41.02 2.90
447 448 7.933577 ACTTTGTCTGTTTAGAGATGACAATGA 59.066 33.333 19.42 3.83 43.91 2.57
448 449 8.092521 ACTTTGTCTGTTTAGAGATGACAATG 57.907 34.615 14.22 14.22 43.91 2.82
449 450 7.389053 GGACTTTGTCTGTTTAGAGATGACAAT 59.611 37.037 7.52 0.00 43.91 2.71
450 451 6.706270 GGACTTTGTCTGTTTAGAGATGACAA 59.294 38.462 0.00 0.00 43.17 3.18
451 452 6.223852 GGACTTTGTCTGTTTAGAGATGACA 58.776 40.000 0.00 0.00 36.10 3.58
452 453 5.346281 CGGACTTTGTCTGTTTAGAGATGAC 59.654 44.000 0.00 0.00 34.54 3.06
453 454 5.243060 TCGGACTTTGTCTGTTTAGAGATGA 59.757 40.000 6.45 0.00 39.68 2.92
454 455 5.470368 TCGGACTTTGTCTGTTTAGAGATG 58.530 41.667 6.45 0.00 39.68 2.90
455 456 5.723672 TCGGACTTTGTCTGTTTAGAGAT 57.276 39.130 6.45 0.00 39.68 2.75
456 457 5.163488 TGTTCGGACTTTGTCTGTTTAGAGA 60.163 40.000 0.00 0.00 39.68 3.10
457 458 5.047847 TGTTCGGACTTTGTCTGTTTAGAG 58.952 41.667 0.00 0.00 39.68 2.43
458 459 5.013568 TGTTCGGACTTTGTCTGTTTAGA 57.986 39.130 0.00 0.00 39.68 2.10
459 460 5.728351 TTGTTCGGACTTTGTCTGTTTAG 57.272 39.130 0.00 0.00 39.68 1.85
460 461 6.072618 TGTTTTGTTCGGACTTTGTCTGTTTA 60.073 34.615 0.00 0.00 39.68 2.01
461 462 5.158494 GTTTTGTTCGGACTTTGTCTGTTT 58.842 37.500 0.00 0.00 39.68 2.83
462 463 4.216687 TGTTTTGTTCGGACTTTGTCTGTT 59.783 37.500 0.00 0.00 39.68 3.16
463 464 3.754323 TGTTTTGTTCGGACTTTGTCTGT 59.246 39.130 0.00 0.00 39.68 3.41
464 465 4.094294 TCTGTTTTGTTCGGACTTTGTCTG 59.906 41.667 0.00 0.43 40.02 3.51
465 466 4.094442 GTCTGTTTTGTTCGGACTTTGTCT 59.906 41.667 0.00 0.00 37.96 3.41
466 467 4.340263 GTCTGTTTTGTTCGGACTTTGTC 58.660 43.478 0.00 0.00 37.96 3.18
467 468 3.181514 CGTCTGTTTTGTTCGGACTTTGT 60.182 43.478 0.00 0.00 38.57 2.83
468 469 3.181514 ACGTCTGTTTTGTTCGGACTTTG 60.182 43.478 0.00 0.00 38.57 2.77
469 470 3.004862 ACGTCTGTTTTGTTCGGACTTT 58.995 40.909 0.00 0.00 38.57 2.66
470 471 2.606272 GACGTCTGTTTTGTTCGGACTT 59.394 45.455 8.70 0.00 38.57 3.01
471 472 2.199236 GACGTCTGTTTTGTTCGGACT 58.801 47.619 8.70 0.00 38.57 3.85
472 473 1.259770 GGACGTCTGTTTTGTTCGGAC 59.740 52.381 16.46 0.00 37.70 4.79
473 474 1.134759 TGGACGTCTGTTTTGTTCGGA 60.135 47.619 16.46 0.00 0.00 4.55
474 475 1.292061 TGGACGTCTGTTTTGTTCGG 58.708 50.000 16.46 0.00 0.00 4.30
475 476 3.602390 AATGGACGTCTGTTTTGTTCG 57.398 42.857 16.46 0.00 0.00 3.95
476 477 6.970613 ACTTAAAATGGACGTCTGTTTTGTTC 59.029 34.615 26.67 8.18 0.00 3.18
477 478 6.859017 ACTTAAAATGGACGTCTGTTTTGTT 58.141 32.000 26.67 15.53 0.00 2.83
478 479 6.445357 ACTTAAAATGGACGTCTGTTTTGT 57.555 33.333 26.67 19.27 0.00 2.83
479 480 5.619607 CGACTTAAAATGGACGTCTGTTTTG 59.380 40.000 26.67 18.85 0.00 2.44
480 481 5.295045 ACGACTTAAAATGGACGTCTGTTTT 59.705 36.000 24.10 24.10 0.00 2.43
481 482 4.812626 ACGACTTAAAATGGACGTCTGTTT 59.187 37.500 16.46 13.33 0.00 2.83
482 483 4.210537 CACGACTTAAAATGGACGTCTGTT 59.789 41.667 16.46 7.79 31.82 3.16
483 484 3.739300 CACGACTTAAAATGGACGTCTGT 59.261 43.478 16.46 1.11 31.82 3.41
484 485 3.739300 ACACGACTTAAAATGGACGTCTG 59.261 43.478 16.46 3.29 31.82 3.51
485 486 3.739300 CACACGACTTAAAATGGACGTCT 59.261 43.478 16.46 0.00 31.82 4.18
486 487 3.492011 ACACACGACTTAAAATGGACGTC 59.508 43.478 7.13 7.13 31.82 4.34
487 488 3.460103 ACACACGACTTAAAATGGACGT 58.540 40.909 0.00 0.00 34.40 4.34
488 489 4.208355 CAACACACGACTTAAAATGGACG 58.792 43.478 0.00 0.00 0.00 4.79
489 490 4.273969 TCCAACACACGACTTAAAATGGAC 59.726 41.667 0.00 0.00 29.93 4.02
490 491 4.452825 TCCAACACACGACTTAAAATGGA 58.547 39.130 0.00 0.00 32.33 3.41
491 492 4.274950 ACTCCAACACACGACTTAAAATGG 59.725 41.667 0.00 0.00 0.00 3.16
492 493 5.418310 ACTCCAACACACGACTTAAAATG 57.582 39.130 0.00 0.00 0.00 2.32
493 494 5.732247 GCAACTCCAACACACGACTTAAAAT 60.732 40.000 0.00 0.00 0.00 1.82
494 495 4.437659 GCAACTCCAACACACGACTTAAAA 60.438 41.667 0.00 0.00 0.00 1.52
495 496 3.064271 GCAACTCCAACACACGACTTAAA 59.936 43.478 0.00 0.00 0.00 1.52
496 497 2.610374 GCAACTCCAACACACGACTTAA 59.390 45.455 0.00 0.00 0.00 1.85
497 498 2.206750 GCAACTCCAACACACGACTTA 58.793 47.619 0.00 0.00 0.00 2.24
498 499 1.014352 GCAACTCCAACACACGACTT 58.986 50.000 0.00 0.00 0.00 3.01
499 500 0.814010 GGCAACTCCAACACACGACT 60.814 55.000 0.00 0.00 34.01 4.18
500 501 1.092921 TGGCAACTCCAACACACGAC 61.093 55.000 0.00 0.00 43.21 4.34
501 502 1.222113 TGGCAACTCCAACACACGA 59.778 52.632 0.00 0.00 43.21 4.35
502 503 3.820590 TGGCAACTCCAACACACG 58.179 55.556 0.00 0.00 43.21 4.49
510 511 1.393603 GGGCTTCTAATGGCAACTCC 58.606 55.000 0.00 0.00 37.61 3.85
511 512 1.064389 AGGGGCTTCTAATGGCAACTC 60.064 52.381 0.00 0.00 37.61 3.01
512 513 1.002857 AGGGGCTTCTAATGGCAACT 58.997 50.000 0.00 0.00 37.61 3.16
513 514 1.852633 AAGGGGCTTCTAATGGCAAC 58.147 50.000 0.00 0.00 0.00 4.17
514 515 2.042979 AGAAAGGGGCTTCTAATGGCAA 59.957 45.455 0.00 0.00 33.81 4.52
515 516 1.640670 AGAAAGGGGCTTCTAATGGCA 59.359 47.619 0.00 0.00 33.81 4.92
516 517 2.443958 AGAAAGGGGCTTCTAATGGC 57.556 50.000 0.00 0.00 33.81 4.40
517 518 5.755849 TCTTTAGAAAGGGGCTTCTAATGG 58.244 41.667 14.87 9.37 43.82 3.16
518 519 7.539436 GTTTCTTTAGAAAGGGGCTTCTAATG 58.461 38.462 5.21 9.81 43.82 1.90
519 520 6.374613 CGTTTCTTTAGAAAGGGGCTTCTAAT 59.625 38.462 14.16 0.00 43.82 1.73
520 521 5.704053 CGTTTCTTTAGAAAGGGGCTTCTAA 59.296 40.000 14.16 3.97 43.82 2.10
521 522 5.243207 CGTTTCTTTAGAAAGGGGCTTCTA 58.757 41.667 14.16 0.00 43.82 2.10
522 523 4.072839 CGTTTCTTTAGAAAGGGGCTTCT 58.927 43.478 14.16 0.00 43.82 2.85
523 524 4.421033 CGTTTCTTTAGAAAGGGGCTTC 57.579 45.455 14.16 0.00 43.82 3.86
535 536 9.642327 TGTGCTATAATGTAAGACGTTTCTTTA 57.358 29.630 0.00 0.00 39.17 1.85
536 537 8.542497 TGTGCTATAATGTAAGACGTTTCTTT 57.458 30.769 0.00 0.00 39.17 2.52
537 538 8.033038 TCTGTGCTATAATGTAAGACGTTTCTT 58.967 33.333 0.00 0.00 44.70 2.52
538 539 7.544622 TCTGTGCTATAATGTAAGACGTTTCT 58.455 34.615 0.00 0.00 0.00 2.52
539 540 7.043325 CCTCTGTGCTATAATGTAAGACGTTTC 60.043 40.741 0.00 0.00 0.00 2.78
540 541 6.757010 CCTCTGTGCTATAATGTAAGACGTTT 59.243 38.462 0.00 0.00 0.00 3.60
541 542 6.127423 ACCTCTGTGCTATAATGTAAGACGTT 60.127 38.462 0.00 0.00 0.00 3.99
542 543 5.360144 ACCTCTGTGCTATAATGTAAGACGT 59.640 40.000 0.00 0.00 0.00 4.34
543 544 5.833082 ACCTCTGTGCTATAATGTAAGACG 58.167 41.667 0.00 0.00 0.00 4.18
544 545 7.942990 ACTACCTCTGTGCTATAATGTAAGAC 58.057 38.462 0.00 0.00 0.00 3.01
545 546 9.286170 CTACTACCTCTGTGCTATAATGTAAGA 57.714 37.037 0.00 0.00 0.00 2.10
546 547 9.286170 TCTACTACCTCTGTGCTATAATGTAAG 57.714 37.037 0.00 0.00 0.00 2.34
547 548 9.809395 ATCTACTACCTCTGTGCTATAATGTAA 57.191 33.333 0.00 0.00 0.00 2.41
548 549 9.232473 CATCTACTACCTCTGTGCTATAATGTA 57.768 37.037 0.00 0.00 0.00 2.29
549 550 7.177568 CCATCTACTACCTCTGTGCTATAATGT 59.822 40.741 0.00 0.00 0.00 2.71
550 551 7.177568 ACCATCTACTACCTCTGTGCTATAATG 59.822 40.741 0.00 0.00 0.00 1.90
551 552 7.242359 ACCATCTACTACCTCTGTGCTATAAT 58.758 38.462 0.00 0.00 0.00 1.28
552 553 6.611785 ACCATCTACTACCTCTGTGCTATAA 58.388 40.000 0.00 0.00 0.00 0.98
553 554 6.202202 ACCATCTACTACCTCTGTGCTATA 57.798 41.667 0.00 0.00 0.00 1.31
554 555 5.068215 ACCATCTACTACCTCTGTGCTAT 57.932 43.478 0.00 0.00 0.00 2.97
555 556 4.521536 ACCATCTACTACCTCTGTGCTA 57.478 45.455 0.00 0.00 0.00 3.49
556 557 3.390175 ACCATCTACTACCTCTGTGCT 57.610 47.619 0.00 0.00 0.00 4.40
557 558 3.786635 CAACCATCTACTACCTCTGTGC 58.213 50.000 0.00 0.00 0.00 4.57
558 559 3.195610 TGCAACCATCTACTACCTCTGTG 59.804 47.826 0.00 0.00 0.00 3.66
559 560 3.441101 TGCAACCATCTACTACCTCTGT 58.559 45.455 0.00 0.00 0.00 3.41
560 561 4.626042 GATGCAACCATCTACTACCTCTG 58.374 47.826 0.00 0.00 43.62 3.35
561 562 4.946478 GATGCAACCATCTACTACCTCT 57.054 45.455 0.00 0.00 43.62 3.69
571 572 2.076100 TGTTGACGAGATGCAACCATC 58.924 47.619 0.00 0.00 46.61 3.51
572 573 1.806542 GTGTTGACGAGATGCAACCAT 59.193 47.619 0.00 0.00 42.72 3.55
573 574 1.225855 GTGTTGACGAGATGCAACCA 58.774 50.000 0.00 0.00 42.72 3.67
574 575 1.225855 TGTGTTGACGAGATGCAACC 58.774 50.000 0.00 0.00 42.72 3.77
575 576 3.542712 AATGTGTTGACGAGATGCAAC 57.457 42.857 0.00 0.00 43.45 4.17
576 577 4.566545 AAAATGTGTTGACGAGATGCAA 57.433 36.364 0.00 0.00 0.00 4.08
577 578 4.566545 AAAAATGTGTTGACGAGATGCA 57.433 36.364 0.00 0.00 0.00 3.96
596 597 8.802856 CGTTTTCAGTATGTTGAAATGTCAAAA 58.197 29.630 0.00 0.00 45.29 2.44
597 598 7.433719 CCGTTTTCAGTATGTTGAAATGTCAAA 59.566 33.333 0.00 0.00 45.29 2.69
598 599 6.915300 CCGTTTTCAGTATGTTGAAATGTCAA 59.085 34.615 0.00 0.00 44.12 3.18
599 600 6.038825 ACCGTTTTCAGTATGTTGAAATGTCA 59.961 34.615 7.12 0.00 44.12 3.58
600 601 6.359617 CACCGTTTTCAGTATGTTGAAATGTC 59.640 38.462 7.12 2.74 44.12 3.06
601 602 6.205784 CACCGTTTTCAGTATGTTGAAATGT 58.794 36.000 7.12 4.06 44.12 2.71
602 603 5.116983 GCACCGTTTTCAGTATGTTGAAATG 59.883 40.000 7.12 4.82 44.12 2.32
603 604 5.219633 GCACCGTTTTCAGTATGTTGAAAT 58.780 37.500 7.12 0.00 44.12 2.17
604 605 4.498345 GGCACCGTTTTCAGTATGTTGAAA 60.498 41.667 3.22 3.22 43.32 2.69
605 606 3.003897 GGCACCGTTTTCAGTATGTTGAA 59.996 43.478 0.00 0.00 37.40 2.69
606 607 2.550606 GGCACCGTTTTCAGTATGTTGA 59.449 45.455 0.00 0.00 37.40 3.18
607 608 2.552315 AGGCACCGTTTTCAGTATGTTG 59.448 45.455 0.00 0.00 37.40 3.33
608 609 2.552315 CAGGCACCGTTTTCAGTATGTT 59.448 45.455 0.00 0.00 37.40 2.71
609 610 2.151202 CAGGCACCGTTTTCAGTATGT 58.849 47.619 0.00 0.00 37.40 2.29
610 611 2.422597 TCAGGCACCGTTTTCAGTATG 58.577 47.619 0.00 0.00 37.54 2.39
611 612 2.851263 TCAGGCACCGTTTTCAGTAT 57.149 45.000 0.00 0.00 0.00 2.12
612 613 2.623878 TTCAGGCACCGTTTTCAGTA 57.376 45.000 0.00 0.00 0.00 2.74
613 614 1.981256 ATTCAGGCACCGTTTTCAGT 58.019 45.000 0.00 0.00 0.00 3.41
614 615 4.701956 AATATTCAGGCACCGTTTTCAG 57.298 40.909 0.00 0.00 0.00 3.02
615 616 4.279671 ACAAATATTCAGGCACCGTTTTCA 59.720 37.500 0.00 0.00 0.00 2.69
616 617 4.621034 CACAAATATTCAGGCACCGTTTTC 59.379 41.667 0.00 0.00 0.00 2.29
617 618 4.038642 ACACAAATATTCAGGCACCGTTTT 59.961 37.500 0.00 0.00 0.00 2.43
618 619 3.572255 ACACAAATATTCAGGCACCGTTT 59.428 39.130 0.00 0.00 0.00 3.60
619 620 3.153919 ACACAAATATTCAGGCACCGTT 58.846 40.909 0.00 0.00 0.00 4.44
620 621 2.790433 ACACAAATATTCAGGCACCGT 58.210 42.857 0.00 0.00 0.00 4.83
621 622 3.848272 AACACAAATATTCAGGCACCG 57.152 42.857 0.00 0.00 0.00 4.94
659 660 9.766277 ACGAAACGTTAATAACAAGTGTTTTTA 57.234 25.926 0.00 2.80 36.35 1.52
660 661 8.672214 ACGAAACGTTAATAACAAGTGTTTTT 57.328 26.923 0.00 3.76 36.35 1.94
677 678 2.281276 GGCCAGGGAACGAAACGT 60.281 61.111 0.00 0.00 43.97 3.99
678 679 3.053896 GGGCCAGGGAACGAAACG 61.054 66.667 4.39 0.00 0.00 3.60
679 680 2.675423 GGGGCCAGGGAACGAAAC 60.675 66.667 4.39 0.00 0.00 2.78
680 681 2.299727 TTTGGGGCCAGGGAACGAAA 62.300 55.000 4.39 0.00 0.00 3.46
681 682 2.087857 ATTTGGGGCCAGGGAACGAA 62.088 55.000 4.39 0.00 0.00 3.85
682 683 1.208844 TATTTGGGGCCAGGGAACGA 61.209 55.000 4.39 0.00 0.00 3.85
683 684 0.751643 CTATTTGGGGCCAGGGAACG 60.752 60.000 4.39 0.00 0.00 3.95
684 685 0.335019 ACTATTTGGGGCCAGGGAAC 59.665 55.000 4.39 0.00 0.00 3.62
685 686 1.988539 TACTATTTGGGGCCAGGGAA 58.011 50.000 4.39 0.00 0.00 3.97
686 687 1.988539 TTACTATTTGGGGCCAGGGA 58.011 50.000 4.39 0.00 0.00 4.20
687 688 4.463050 TTATTACTATTTGGGGCCAGGG 57.537 45.455 4.39 0.00 0.00 4.45
688 689 8.485578 TTTTATTATTACTATTTGGGGCCAGG 57.514 34.615 4.39 0.00 0.00 4.45
721 722 7.807680 ACGTTTTGTTTCTAGAAGATGGAATC 58.192 34.615 5.12 0.00 46.04 2.52
724 725 6.764085 TCAACGTTTTGTTTCTAGAAGATGGA 59.236 34.615 5.12 0.00 39.29 3.41
756 757 8.903059 AATTATTGATGGGGGTTAGTTTACAA 57.097 30.769 0.00 0.00 0.00 2.41
767 768 4.222336 TGCTGGTTAATTATTGATGGGGG 58.778 43.478 0.00 0.00 0.00 5.40
770 771 5.128499 TGGGTTGCTGGTTAATTATTGATGG 59.872 40.000 0.00 0.00 0.00 3.51
784 785 1.482748 AAGGCCAAATGGGTTGCTGG 61.483 55.000 5.01 0.00 39.65 4.85
819 820 1.227556 GTGGGTATACAGCGGCCAG 60.228 63.158 2.24 0.00 0.00 4.85
820 821 2.737881 GGTGGGTATACAGCGGCCA 61.738 63.158 2.24 0.00 0.00 5.36
821 822 2.110420 GGTGGGTATACAGCGGCC 59.890 66.667 5.01 0.00 0.00 6.13
822 823 1.523032 GTGGTGGGTATACAGCGGC 60.523 63.158 5.01 0.00 41.54 6.53
1041 1049 2.203714 GGAGGGGAGGGGATCGAG 60.204 72.222 0.00 0.00 0.00 4.04
1042 1050 3.846254 GGGAGGGGAGGGGATCGA 61.846 72.222 0.00 0.00 0.00 3.59
1046 1054 3.707189 GGAAGGGAGGGGAGGGGA 61.707 72.222 0.00 0.00 0.00 4.81
1047 1055 4.845307 GGGAAGGGAGGGGAGGGG 62.845 77.778 0.00 0.00 0.00 4.79
1048 1056 3.289454 AAGGGAAGGGAGGGGAGGG 62.289 68.421 0.00 0.00 0.00 4.30
1049 1057 1.694525 GAAGGGAAGGGAGGGGAGG 60.695 68.421 0.00 0.00 0.00 4.30
1050 1058 1.694525 GGAAGGGAAGGGAGGGGAG 60.695 68.421 0.00 0.00 0.00 4.30
1051 1059 2.191846 AGGAAGGGAAGGGAGGGGA 61.192 63.158 0.00 0.00 0.00 4.81
1052 1060 1.694525 GAGGAAGGGAAGGGAGGGG 60.695 68.421 0.00 0.00 0.00 4.79
1053 1061 1.694525 GGAGGAAGGGAAGGGAGGG 60.695 68.421 0.00 0.00 0.00 4.30
1054 1062 2.066999 CGGAGGAAGGGAAGGGAGG 61.067 68.421 0.00 0.00 0.00 4.30
1055 1063 1.306226 ACGGAGGAAGGGAAGGGAG 60.306 63.158 0.00 0.00 0.00 4.30
1067 1075 0.752376 GGTAGGTGAGGAGACGGAGG 60.752 65.000 0.00 0.00 0.00 4.30
1072 1080 1.096416 CAGTCGGTAGGTGAGGAGAC 58.904 60.000 0.00 0.00 0.00 3.36
1074 1082 1.950909 GATCAGTCGGTAGGTGAGGAG 59.049 57.143 0.00 0.00 0.00 3.69
1346 1354 3.467226 GTGATCGCGGGAAGGGGA 61.467 66.667 6.13 0.00 0.00 4.81
1347 1355 4.891727 CGTGATCGCGGGAAGGGG 62.892 72.222 20.77 0.00 0.00 4.79
1349 1357 1.661821 GATCGTGATCGCGGGAAGG 60.662 63.158 26.94 0.00 36.96 3.46
1350 1358 0.591659 TAGATCGTGATCGCGGGAAG 59.408 55.000 26.94 0.14 42.48 3.46
1354 1362 1.210413 CCCTAGATCGTGATCGCGG 59.790 63.158 26.94 11.38 42.48 6.46
1475 1483 2.413112 ACGTGCAAAAGAGACATCATCG 59.587 45.455 0.00 0.00 0.00 3.84
1598 1607 0.659957 GCTTAGCCCATTTCTCTGCG 59.340 55.000 0.00 0.00 0.00 5.18
1610 1619 1.079127 TTGCAGACTCGGCTTAGCC 60.079 57.895 14.22 14.22 46.75 3.93
1613 1622 1.596934 CCCTTGCAGACTCGGCTTA 59.403 57.895 2.74 0.00 0.00 3.09
1678 1687 7.561356 AGTTTCCTTTTTCTTCTTGATTGAGGA 59.439 33.333 0.00 0.00 0.00 3.71
1680 1689 9.028185 CAAGTTTCCTTTTTCTTCTTGATTGAG 57.972 33.333 0.00 0.00 34.62 3.02
1681 1690 7.492344 GCAAGTTTCCTTTTTCTTCTTGATTGA 59.508 33.333 0.00 0.00 34.62 2.57
1682 1691 7.278424 TGCAAGTTTCCTTTTTCTTCTTGATTG 59.722 33.333 0.00 0.00 34.62 2.67
1685 1694 6.279513 TGCAAGTTTCCTTTTTCTTCTTGA 57.720 33.333 0.00 0.00 34.62 3.02
1686 1695 6.966435 TTGCAAGTTTCCTTTTTCTTCTTG 57.034 33.333 0.00 0.00 35.43 3.02
1692 1701 6.313658 AGTCACAATTGCAAGTTTCCTTTTTC 59.686 34.615 4.94 0.00 0.00 2.29
1749 1759 7.308408 GGAACTTACAAACTGTAGACAATTCCC 60.308 40.741 0.00 0.00 33.92 3.97
1750 1760 7.570691 CGGAACTTACAAACTGTAGACAATTCC 60.571 40.741 0.00 0.00 33.92 3.01
1751 1761 7.042254 ACGGAACTTACAAACTGTAGACAATTC 60.042 37.037 0.00 0.00 33.92 2.17
1752 1762 6.764560 ACGGAACTTACAAACTGTAGACAATT 59.235 34.615 0.00 0.00 33.92 2.32
1753 1763 6.202188 CACGGAACTTACAAACTGTAGACAAT 59.798 38.462 0.00 0.00 33.92 2.71
1754 1764 5.521010 CACGGAACTTACAAACTGTAGACAA 59.479 40.000 0.00 0.00 33.92 3.18
1755 1765 5.045215 CACGGAACTTACAAACTGTAGACA 58.955 41.667 0.00 0.00 33.92 3.41
1756 1766 4.084693 GCACGGAACTTACAAACTGTAGAC 60.085 45.833 0.00 0.00 33.92 2.59
1757 1767 4.053295 GCACGGAACTTACAAACTGTAGA 58.947 43.478 0.00 0.00 33.92 2.59
1769 1779 3.134458 CTGAGAAAGAAGCACGGAACTT 58.866 45.455 0.00 0.00 0.00 2.66
1770 1780 2.103263 ACTGAGAAAGAAGCACGGAACT 59.897 45.455 0.00 0.00 0.00 3.01
1776 1786 5.980025 GTGAAACTACTGAGAAAGAAGCAC 58.020 41.667 0.00 0.00 0.00 4.40
1825 1835 6.780457 ATGTCCTGCATAACTAAAATTGCT 57.220 33.333 0.00 0.00 35.74 3.91
1856 1866 0.597568 TCAAATTCAAGTGCCAGCGG 59.402 50.000 0.00 0.00 0.00 5.52
1886 1896 1.135139 GCTCAGACGCTCCATGAACTA 59.865 52.381 0.00 0.00 0.00 2.24
1893 1903 0.893727 TACAGTGCTCAGACGCTCCA 60.894 55.000 0.00 0.00 0.00 3.86
1913 1923 9.504708 AAAGCTCTGATCCATAAATTATGAGAG 57.495 33.333 17.89 17.89 38.45 3.20
1924 1934 6.885918 TGAAACATCAAAAGCTCTGATCCATA 59.114 34.615 8.03 0.00 30.99 2.74
1932 1942 5.415077 CCAGAGATGAAACATCAAAAGCTCT 59.585 40.000 13.06 0.00 0.00 4.09
1940 1950 4.259356 CTGCTTCCAGAGATGAAACATCA 58.741 43.478 13.06 0.00 41.77 3.07
1947 1957 1.630126 GGCCCTGCTTCCAGAGATGA 61.630 60.000 0.00 0.00 41.77 2.92
1955 1965 1.106285 CATAAACAGGCCCTGCTTCC 58.894 55.000 11.63 0.00 34.37 3.46
1962 1972 3.200165 ACCTCTTCTACATAAACAGGCCC 59.800 47.826 0.00 0.00 0.00 5.80
2024 2034 7.704472 CAGTTCAAACTAAACTGCCAAAACATA 59.296 33.333 3.34 0.00 44.94 2.29
2035 2045 5.099575 CGTTTTGGCAGTTCAAACTAAACT 58.900 37.500 9.95 0.00 37.08 2.66
2036 2046 4.860352 ACGTTTTGGCAGTTCAAACTAAAC 59.140 37.500 9.95 8.13 37.08 2.01
2037 2047 5.061920 ACGTTTTGGCAGTTCAAACTAAA 57.938 34.783 9.95 0.00 37.08 1.85
2038 2048 4.396790 AGACGTTTTGGCAGTTCAAACTAA 59.603 37.500 9.95 0.00 37.08 2.24
2039 2049 3.942748 AGACGTTTTGGCAGTTCAAACTA 59.057 39.130 9.95 0.00 37.08 2.24
2040 2050 2.752903 AGACGTTTTGGCAGTTCAAACT 59.247 40.909 9.95 0.00 40.60 2.66
2041 2051 3.105937 GAGACGTTTTGGCAGTTCAAAC 58.894 45.455 0.00 3.06 36.49 2.93
2104 2114 9.067986 CCTCTGTTCTCCTTAAACATAAAAGTT 57.932 33.333 0.00 0.00 36.14 2.66
2105 2115 8.218488 ACCTCTGTTCTCCTTAAACATAAAAGT 58.782 33.333 0.00 0.00 36.14 2.66
2106 2116 8.622948 ACCTCTGTTCTCCTTAAACATAAAAG 57.377 34.615 0.00 0.00 36.14 2.27
2107 2117 9.720769 CTACCTCTGTTCTCCTTAAACATAAAA 57.279 33.333 0.00 0.00 36.14 1.52
2108 2118 8.877195 ACTACCTCTGTTCTCCTTAAACATAAA 58.123 33.333 0.00 0.00 36.14 1.40
2109 2119 8.431910 ACTACCTCTGTTCTCCTTAAACATAA 57.568 34.615 0.00 0.00 36.14 1.90
2110 2120 8.964772 GTACTACCTCTGTTCTCCTTAAACATA 58.035 37.037 0.00 0.00 36.14 2.29
2111 2121 6.936968 ACTACCTCTGTTCTCCTTAAACAT 57.063 37.500 0.00 0.00 36.14 2.71
2112 2122 6.779049 TGTACTACCTCTGTTCTCCTTAAACA 59.221 38.462 0.00 0.00 35.44 2.83
2113 2123 7.224522 TGTACTACCTCTGTTCTCCTTAAAC 57.775 40.000 0.00 0.00 0.00 2.01
2114 2124 7.894364 AGATGTACTACCTCTGTTCTCCTTAAA 59.106 37.037 0.00 0.00 0.00 1.52
2115 2125 7.411808 AGATGTACTACCTCTGTTCTCCTTAA 58.588 38.462 0.00 0.00 0.00 1.85
2116 2126 6.971340 AGATGTACTACCTCTGTTCTCCTTA 58.029 40.000 0.00 0.00 0.00 2.69
2117 2127 5.833340 AGATGTACTACCTCTGTTCTCCTT 58.167 41.667 0.00 0.00 0.00 3.36
2118 2128 5.459982 AGATGTACTACCTCTGTTCTCCT 57.540 43.478 0.00 0.00 0.00 3.69
2119 2129 7.642082 TTAAGATGTACTACCTCTGTTCTCC 57.358 40.000 0.00 0.00 0.00 3.71
2120 2130 9.575783 CTTTTAAGATGTACTACCTCTGTTCTC 57.424 37.037 0.00 0.00 0.00 2.87
2121 2131 9.310449 TCTTTTAAGATGTACTACCTCTGTTCT 57.690 33.333 0.00 0.00 0.00 3.01
2122 2132 9.575783 CTCTTTTAAGATGTACTACCTCTGTTC 57.424 37.037 0.00 0.00 33.93 3.18
2123 2133 9.091220 ACTCTTTTAAGATGTACTACCTCTGTT 57.909 33.333 0.00 0.00 33.93 3.16
2124 2134 8.653036 ACTCTTTTAAGATGTACTACCTCTGT 57.347 34.615 0.00 0.00 33.93 3.41
2126 2136 9.978336 AGTACTCTTTTAAGATGTACTACCTCT 57.022 33.333 20.65 7.54 42.00 3.69
2184 2194 6.483640 GGAGCTTTAACCTGAATACATGGTAG 59.516 42.308 0.00 0.00 33.17 3.18
2187 2197 5.192927 TGGAGCTTTAACCTGAATACATGG 58.807 41.667 0.00 0.00 0.00 3.66
2194 2204 2.949177 TGCTGGAGCTTTAACCTGAA 57.051 45.000 0.00 0.00 42.66 3.02
2298 2316 6.808008 AAACATAACTTGTCAGAGACATGG 57.192 37.500 14.80 8.00 42.40 3.66
2316 2335 8.891671 ACATGAAAATTCACTTGCTAAAACAT 57.108 26.923 0.00 0.00 40.49 2.71
2363 2386 8.576442 ACCAACAGAACTAAAATGGTAATTCAG 58.424 33.333 0.00 0.00 39.29 3.02
2555 2578 6.150976 CACTAAGCCACCTATTGATGTTTTCA 59.849 38.462 0.00 0.00 0.00 2.69
2576 2599 1.136305 GCATGGTTACGGAGCTCACTA 59.864 52.381 17.19 3.03 0.00 2.74
2609 2632 4.405548 TGTTTCCAACCATCATGATGACA 58.594 39.130 32.71 23.61 41.20 3.58
2615 2638 4.082300 TCGGATTTGTTTCCAACCATCATG 60.082 41.667 0.00 0.00 35.34 3.07
2663 2686 0.918310 ATGCCTGCCCTTCTTCCTCT 60.918 55.000 0.00 0.00 0.00 3.69
2870 2893 1.480137 CACCCTTTCTTTGTGTTGCCA 59.520 47.619 0.00 0.00 0.00 4.92
2878 2901 3.253432 GGTAGAACAGCACCCTTTCTTTG 59.747 47.826 0.00 0.00 31.93 2.77
2879 2902 3.138468 AGGTAGAACAGCACCCTTTCTTT 59.862 43.478 0.00 0.00 35.25 2.52
2983 3006 2.271944 AAAGGAGTCAAAAGGGACCG 57.728 50.000 0.00 0.00 38.59 4.79
2990 3013 2.745968 ACAGGCCAAAAGGAGTCAAAA 58.254 42.857 5.01 0.00 0.00 2.44
3156 3180 6.154021 GTCTTAGGAGGACAAACATGTACCTA 59.846 42.308 0.00 1.90 34.23 3.08
3162 3186 6.349611 CCAAATGTCTTAGGAGGACAAACATG 60.350 42.308 0.72 0.00 45.09 3.21
3253 3278 4.979335 TGTTCAGATAACACCACAATCCA 58.021 39.130 0.00 0.00 0.00 3.41
3298 3323 7.275341 TCAGTTTGCAAGAACAATGTTAACAAG 59.725 33.333 13.23 10.85 31.94 3.16
3300 3325 6.625362 TCAGTTTGCAAGAACAATGTTAACA 58.375 32.000 11.41 11.41 31.94 2.41
3303 3328 5.592282 TCCTCAGTTTGCAAGAACAATGTTA 59.408 36.000 0.00 0.00 31.94 2.41
3352 3377 1.021390 AAGCAGGATCAGCGAAACCG 61.021 55.000 0.00 0.00 37.01 4.44
3409 3471 2.289547 ACACGAAAACGACCAATCCAAG 59.710 45.455 0.00 0.00 0.00 3.61
3411 3473 1.956297 ACACGAAAACGACCAATCCA 58.044 45.000 0.00 0.00 0.00 3.41
3434 3496 0.821711 CGAACAAACTGGAGGCCCAA 60.822 55.000 0.00 0.00 42.98 4.12
3452 3514 6.662414 ACTGAAATCCACATACATTACACG 57.338 37.500 0.00 0.00 0.00 4.49
3455 3517 7.624360 TGGAACTGAAATCCACATACATTAC 57.376 36.000 0.00 0.00 41.98 1.89
3462 3524 9.293404 CATATATCTTGGAACTGAAATCCACAT 57.707 33.333 0.00 0.00 46.37 3.21
3493 3557 0.392461 TGCTGCTGTTCCGGTAATCC 60.392 55.000 0.00 0.00 0.00 3.01
3581 3645 2.183811 CAGGTGAGCTGCTCCTCG 59.816 66.667 25.61 8.86 38.41 4.63
3682 3748 2.503331 CACACTACAGAAACCCATGCA 58.497 47.619 0.00 0.00 0.00 3.96
3702 3768 4.319046 CCAGATGCATTATACGAACACTGC 60.319 45.833 0.00 0.00 0.00 4.40
3708 3774 5.611796 GCAATCCAGATGCATTATACGAA 57.388 39.130 0.00 0.00 43.29 3.85
3815 3881 2.045926 CTTTCCGTGGCCTCTGGG 60.046 66.667 3.32 0.00 0.00 4.45
3847 3918 3.962063 GTTCAAAGGGGGTTTAAGGTTGA 59.038 43.478 0.00 0.00 0.00 3.18
3917 3988 0.909623 AAACGTCGGGGAATGGATCT 59.090 50.000 0.00 0.00 0.00 2.75
3928 3999 0.515564 AAAAGGCGATGAAACGTCGG 59.484 50.000 13.73 0.00 42.88 4.79
3951 4022 2.699954 ACAATCTTTTGCCGATCTCGT 58.300 42.857 0.00 0.00 36.22 4.18
3953 4024 4.393062 TCTGAACAATCTTTTGCCGATCTC 59.607 41.667 0.00 0.00 36.22 2.75
3955 4026 4.685169 TCTGAACAATCTTTTGCCGATC 57.315 40.909 0.00 0.00 36.22 3.69
3956 4027 4.676196 GCATCTGAACAATCTTTTGCCGAT 60.676 41.667 0.00 0.00 36.22 4.18
3958 4029 2.919229 GCATCTGAACAATCTTTTGCCG 59.081 45.455 0.00 0.00 36.22 5.69
3959 4030 3.256558 GGCATCTGAACAATCTTTTGCC 58.743 45.455 0.00 0.00 37.24 4.52
4011 4082 4.081752 TGTGTTCAAATTTTGCAGTGGTCT 60.082 37.500 4.19 0.00 0.00 3.85
4024 4097 5.788450 TCCCGCAAATAATTGTGTTCAAAT 58.212 33.333 3.53 0.00 43.90 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.