Multiple sequence alignment - TraesCS5A01G478600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G478600 chr5A 100.000 3833 0 0 1 3833 651848813 651844981 0.000000e+00 7079
1 TraesCS5A01G478600 chr5A 86.653 989 132 0 1 989 653708445 653709433 0.000000e+00 1096
2 TraesCS5A01G478600 chr5A 92.169 498 38 1 3335 3832 390097363 390096867 0.000000e+00 702
3 TraesCS5A01G478600 chr5A 92.169 498 37 2 3336 3833 651828328 651827833 0.000000e+00 702
4 TraesCS5A01G478600 chr5A 91.617 501 42 0 3333 3833 160066717 160067217 0.000000e+00 693
5 TraesCS5A01G478600 chr5A 83.186 113 19 0 450 562 536293952 536293840 1.880000e-18 104
6 TraesCS5A01G478600 chr5D 91.650 1006 84 0 1 1006 525477739 525476734 0.000000e+00 1393
7 TraesCS5A01G478600 chr5D 87.563 989 123 0 1 989 526562919 526563907 0.000000e+00 1146
8 TraesCS5A01G478600 chr5D 80.317 1072 200 8 1185 2247 525475064 525473995 0.000000e+00 800
9 TraesCS5A01G478600 chr5D 84.685 111 15 2 452 561 29583626 29583735 4.050000e-20 110
10 TraesCS5A01G478600 chr5B 90.954 1006 85 1 1 1006 659818715 659817716 0.000000e+00 1349
11 TraesCS5A01G478600 chr5B 86.177 1143 143 9 1318 2456 659816459 659815328 0.000000e+00 1221
12 TraesCS5A01G478600 chr5B 86.957 989 129 0 1 989 662026372 662027360 0.000000e+00 1112
13 TraesCS5A01G478600 chr5B 86.872 358 36 8 2786 3137 659814023 659813671 1.290000e-104 390
14 TraesCS5A01G478600 chr6B 90.297 1010 93 3 1 1006 699061868 699060860 0.000000e+00 1317
15 TraesCS5A01G478600 chr3A 92.369 498 38 0 3333 3830 369000615 369001112 0.000000e+00 710
16 TraesCS5A01G478600 chr2A 92.016 501 39 1 3333 3833 196785229 196784730 0.000000e+00 702
17 TraesCS5A01G478600 chr2A 75.254 590 118 13 443 1006 764786799 764786212 4.910000e-64 255
18 TraesCS5A01G478600 chr7A 91.816 501 41 0 3333 3833 209761949 209762449 0.000000e+00 699
19 TraesCS5A01G478600 chr7A 92.000 500 36 4 3333 3830 332738198 332738695 0.000000e+00 699
20 TraesCS5A01G478600 chr1A 91.816 501 41 0 3333 3833 280959927 280960427 0.000000e+00 699
21 TraesCS5A01G478600 chr3D 91.833 502 38 3 3333 3833 493260711 493260212 0.000000e+00 697
22 TraesCS5A01G478600 chr4A 74.165 1018 211 26 3 991 726293991 726294985 3.620000e-100 375
23 TraesCS5A01G478600 chr7D 73.410 1038 214 37 3 1006 11665579 11666588 7.940000e-87 331
24 TraesCS5A01G478600 chr2D 76.334 431 93 8 582 1006 639165277 639164850 4.980000e-54 222


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G478600 chr5A 651844981 651848813 3832 True 7079.000000 7079 100.0000 1 3833 1 chr5A.!!$R4 3832
1 TraesCS5A01G478600 chr5A 653708445 653709433 988 False 1096.000000 1096 86.6530 1 989 1 chr5A.!!$F2 988
2 TraesCS5A01G478600 chr5A 160066717 160067217 500 False 693.000000 693 91.6170 3333 3833 1 chr5A.!!$F1 500
3 TraesCS5A01G478600 chr5D 526562919 526563907 988 False 1146.000000 1146 87.5630 1 989 1 chr5D.!!$F2 988
4 TraesCS5A01G478600 chr5D 525473995 525477739 3744 True 1096.500000 1393 85.9835 1 2247 2 chr5D.!!$R1 2246
5 TraesCS5A01G478600 chr5B 662026372 662027360 988 False 1112.000000 1112 86.9570 1 989 1 chr5B.!!$F1 988
6 TraesCS5A01G478600 chr5B 659813671 659818715 5044 True 986.666667 1349 88.0010 1 3137 3 chr5B.!!$R1 3136
7 TraesCS5A01G478600 chr6B 699060860 699061868 1008 True 1317.000000 1317 90.2970 1 1006 1 chr6B.!!$R1 1005
8 TraesCS5A01G478600 chr2A 764786212 764786799 587 True 255.000000 255 75.2540 443 1006 1 chr2A.!!$R2 563
9 TraesCS5A01G478600 chr7A 209761949 209762449 500 False 699.000000 699 91.8160 3333 3833 1 chr7A.!!$F1 500
10 TraesCS5A01G478600 chr1A 280959927 280960427 500 False 699.000000 699 91.8160 3333 3833 1 chr1A.!!$F1 500
11 TraesCS5A01G478600 chr4A 726293991 726294985 994 False 375.000000 375 74.1650 3 991 1 chr4A.!!$F1 988
12 TraesCS5A01G478600 chr7D 11665579 11666588 1009 False 331.000000 331 73.4100 3 1006 1 chr7D.!!$F1 1003

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
358 359 0.037975 GCAAGTGGAACCCTGCAATG 60.038 55.0 0.00 0.0 43.51 2.82 F
1148 2626 0.035439 ACTGTTGCCGTAATCAGGGG 60.035 55.0 0.00 0.0 32.92 4.79 F
2073 3631 0.035458 GCCGGCCTATATTGAGTGCT 59.965 55.0 18.11 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1220 2752 0.035630 GAGGAGTGTCTGGCAGCATT 60.036 55.0 10.34 8.1 0.00 3.56 R
2556 4892 0.106894 CGGCAGGAATCCCTAGGAAC 59.893 60.0 11.48 0.0 42.02 3.62 R
3244 5783 0.041839 CAGAACAAGCAGCGACACAC 60.042 55.0 0.00 0.0 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 7.147976 TGTAGTCGATGATTTATGGACATCAG 58.852 38.462 0.00 0.00 44.29 2.90
73 74 5.472137 GGATATTATTAGCCGTGCTTTTCCA 59.528 40.000 3.71 0.00 40.44 3.53
145 146 5.584649 TGTAGCATTAGCATGTTCTGGTTAC 59.415 40.000 0.00 0.00 45.49 2.50
256 257 1.541588 GGTGCTTGCCCTAAAGAGTTG 59.458 52.381 0.00 0.00 0.00 3.16
358 359 0.037975 GCAAGTGGAACCCTGCAATG 60.038 55.000 0.00 0.00 43.51 2.82
359 360 0.604578 CAAGTGGAACCCTGCAATGG 59.395 55.000 0.41 0.41 37.80 3.16
364 365 0.899717 GGAACCCTGCAATGGAGCAA 60.900 55.000 8.86 0.00 45.13 3.91
371 378 0.685131 TGCAATGGAGCAATGGGAGG 60.685 55.000 0.00 0.00 42.46 4.30
372 379 2.024590 GCAATGGAGCAATGGGAGGC 62.025 60.000 0.00 0.00 0.00 4.70
436 449 3.652057 TCCCAAGGGATGAAAGATGTC 57.348 47.619 3.04 0.00 39.76 3.06
520 533 1.898863 ATCCAGAGGGCCACACTATT 58.101 50.000 6.18 0.00 0.00 1.73
564 577 4.798574 CAATGGGTAGCTGAAAGTTTGAC 58.201 43.478 0.00 0.00 35.30 3.18
571 584 1.264288 GCTGAAAGTTTGACCGGTGAG 59.736 52.381 14.63 0.00 35.30 3.51
591 628 5.869888 GTGAGACTGAGTATGGTTACTTTGG 59.130 44.000 0.00 0.00 38.81 3.28
628 665 5.529289 AGAGGTATGATCCAACCTGTAGAA 58.471 41.667 18.22 0.00 46.22 2.10
631 668 4.809426 GGTATGATCCAACCTGTAGAAACG 59.191 45.833 6.37 0.00 32.72 3.60
633 670 4.188247 TGATCCAACCTGTAGAAACGAG 57.812 45.455 0.00 0.00 0.00 4.18
662 699 2.423577 GGGAGGTGTTGTCATGTACAC 58.576 52.381 15.39 15.39 42.97 2.90
670 707 5.472137 GGTGTTGTCATGTACACTAAACCAT 59.528 40.000 19.87 0.00 43.19 3.55
693 730 5.815233 ATGGTACTGGATCTTATCAGGTG 57.185 43.478 0.00 0.00 35.47 4.00
740 777 7.809331 TCATCATTGCTGTGAACTATTTTGAAC 59.191 33.333 0.00 0.00 0.00 3.18
744 781 6.214191 TGCTGTGAACTATTTTGAACCAAA 57.786 33.333 0.00 0.00 0.00 3.28
745 782 6.039616 TGCTGTGAACTATTTTGAACCAAAC 58.960 36.000 0.00 0.00 32.79 2.93
752 789 5.623169 ACTATTTTGAACCAAACCTACGGA 58.377 37.500 0.00 0.00 32.79 4.69
801 838 1.269051 CCAGTTCGGAGGTGCAAAAAC 60.269 52.381 0.00 0.00 36.56 2.43
821 858 1.062587 CTGCAAAGATACCGGAAAGCG 59.937 52.381 9.46 0.00 0.00 4.68
834 871 0.721718 GAAAGCGTCAGAATGTCCCG 59.278 55.000 0.00 0.00 37.40 5.14
976 1016 7.653647 ACCTCACTAGAATCGATGAACTATTC 58.346 38.462 0.00 0.00 32.91 1.75
991 1031 7.825331 TGAACTATTCCGACTGAGATATCTT 57.175 36.000 6.70 0.00 0.00 2.40
1015 2004 5.771153 TGATTGAATGCAAGAGAACACAA 57.229 34.783 0.00 0.00 37.45 3.33
1044 2033 3.858638 AGTACAAAGGGGAAGATGGGAAT 59.141 43.478 0.00 0.00 0.00 3.01
1048 2037 4.166919 ACAAAGGGGAAGATGGGAATAGAG 59.833 45.833 0.00 0.00 0.00 2.43
1055 2044 4.410555 GGAAGATGGGAATAGAGAACCTGT 59.589 45.833 0.00 0.00 0.00 4.00
1089 2567 6.127619 ACGAATTTTTCCTCCCTTTGATGATC 60.128 38.462 0.00 0.00 0.00 2.92
1090 2568 6.127647 CGAATTTTTCCTCCCTTTGATGATCA 60.128 38.462 0.00 0.00 0.00 2.92
1091 2569 7.557875 AATTTTTCCTCCCTTTGATGATCAA 57.442 32.000 3.29 3.29 34.03 2.57
1099 2577 8.060689 TCCTCCCTTTGATGATCAAATTGATTA 58.939 33.333 19.72 6.41 44.37 1.75
1100 2578 8.358148 CCTCCCTTTGATGATCAAATTGATTAG 58.642 37.037 19.72 7.32 44.37 1.73
1131 2609 4.973168 TGTTTCTCCTGTGATGCTAAACT 58.027 39.130 0.00 0.00 0.00 2.66
1137 2615 2.095059 CCTGTGATGCTAAACTGTTGCC 60.095 50.000 0.00 0.00 0.00 4.52
1147 2625 1.821216 AACTGTTGCCGTAATCAGGG 58.179 50.000 0.00 0.00 32.92 4.45
1148 2626 0.035439 ACTGTTGCCGTAATCAGGGG 60.035 55.000 0.00 0.00 32.92 4.79
1149 2627 0.251916 CTGTTGCCGTAATCAGGGGA 59.748 55.000 0.00 0.00 0.00 4.81
1158 2636 4.695928 GCCGTAATCAGGGGATTTTCTATC 59.304 45.833 0.00 0.00 40.87 2.08
1159 2637 5.744887 GCCGTAATCAGGGGATTTTCTATCA 60.745 44.000 0.00 0.00 40.87 2.15
1162 2640 7.256190 CCGTAATCAGGGGATTTTCTATCACTA 60.256 40.741 0.00 0.00 40.87 2.74
1163 2641 8.314751 CGTAATCAGGGGATTTTCTATCACTAT 58.685 37.037 0.00 0.00 40.87 2.12
1164 2642 9.660180 GTAATCAGGGGATTTTCTATCACTATC 57.340 37.037 0.00 0.00 40.87 2.08
1166 2644 9.621239 AATCAGGGGATTTTCTATCACTATCTA 57.379 33.333 0.00 0.00 40.87 1.98
1205 2683 1.374758 CTCCTGTGTTGCCTCGGAC 60.375 63.158 0.00 0.00 0.00 4.79
1207 2685 1.227823 CCTGTGTTGCCTCGGACAA 60.228 57.895 0.00 0.00 0.00 3.18
1212 2744 3.249189 TTGCCTCGGACAAGCCCT 61.249 61.111 0.00 0.00 0.00 5.19
1220 2752 2.431683 GACAAGCCCTGACCAGCA 59.568 61.111 0.00 0.00 0.00 4.41
1224 2756 1.980772 AAGCCCTGACCAGCAATGC 60.981 57.895 0.00 0.00 0.00 3.56
1241 2773 1.079266 GCTGCCAGACACTCCTCTG 60.079 63.158 0.00 0.00 37.94 3.35
1244 2776 1.375268 GCCAGACACTCCTCTGTGC 60.375 63.158 0.00 0.00 41.30 4.57
1245 2777 2.052779 CCAGACACTCCTCTGTGCA 58.947 57.895 0.00 0.00 41.30 4.57
1276 2808 3.744559 GGCGCACCTTGAAAGTCA 58.255 55.556 10.83 0.00 0.00 3.41
1278 2810 0.884704 GGCGCACCTTGAAAGTCAGA 60.885 55.000 10.83 0.00 0.00 3.27
1303 2856 0.605319 CACCTTCAAAGCCGCCTACA 60.605 55.000 0.00 0.00 0.00 2.74
1307 2860 0.596082 TTCAAAGCCGCCTACAAAGC 59.404 50.000 0.00 0.00 0.00 3.51
1330 2883 1.126488 TGATGATCTCCTCTGGTGGC 58.874 55.000 0.00 0.00 0.00 5.01
1332 2885 1.698532 GATGATCTCCTCTGGTGGCAT 59.301 52.381 0.00 0.00 0.00 4.40
1356 2909 4.036804 GCACAATGCAACGCCGGA 62.037 61.111 5.05 0.00 44.26 5.14
1449 3002 0.747644 TCGGCACCTTCGTCGGTATA 60.748 55.000 0.00 0.00 34.94 1.47
1516 3069 4.102367 AGCATCTCTTCCCTAATCTCCAAC 59.898 45.833 0.00 0.00 0.00 3.77
1519 3072 3.115390 CTCTTCCCTAATCTCCAACCCA 58.885 50.000 0.00 0.00 0.00 4.51
1529 3082 1.795170 CTCCAACCCAAAGCCACGTG 61.795 60.000 9.08 9.08 0.00 4.49
1531 3084 1.358759 CAACCCAAAGCCACGTGTC 59.641 57.895 15.65 0.10 0.00 3.67
1534 3087 3.276091 CCAAAGCCACGTGTCGCA 61.276 61.111 15.65 0.00 0.00 5.10
1535 3088 2.712539 CAAAGCCACGTGTCGCAA 59.287 55.556 15.65 0.00 0.00 4.85
1541 3094 4.374702 CACGTGTCGCAAGCAGGC 62.375 66.667 7.58 0.00 34.31 4.85
1542 3095 4.609018 ACGTGTCGCAAGCAGGCT 62.609 61.111 0.00 0.00 34.31 4.58
1605 3158 4.233123 TGAAAGCTTCATTGCTCTTGTG 57.767 40.909 0.00 0.00 43.24 3.33
1618 3171 2.229784 GCTCTTGTGGAGAAACAATGGG 59.770 50.000 0.00 0.00 44.45 4.00
1619 3172 2.229784 CTCTTGTGGAGAAACAATGGGC 59.770 50.000 0.00 0.00 44.45 5.36
1625 3178 1.541588 GGAGAAACAATGGGCAGTCAC 59.458 52.381 0.00 0.00 0.00 3.67
1659 3212 2.512515 GTCGGGTCATGCTGCCTC 60.513 66.667 0.00 0.00 0.00 4.70
1701 3254 0.038159 CTCTCTTCGTCGCCAACCTT 60.038 55.000 0.00 0.00 0.00 3.50
1733 3286 3.131396 GAGCTGTTCTCGGAAAAGTTGA 58.869 45.455 0.00 0.00 31.20 3.18
1788 3341 3.079578 CACTGAACATGTTGCCTCTGAT 58.920 45.455 17.58 0.00 0.00 2.90
1793 3346 3.708403 ACATGTTGCCTCTGATGAGAA 57.292 42.857 0.00 0.00 42.73 2.87
1858 3411 8.205092 CACATATTGTGGTGCTTAAGCATGATC 61.205 40.741 31.46 18.73 45.48 2.92
1879 3432 1.280421 ACTGGAGAGTGAAAGGCATCC 59.720 52.381 0.00 0.00 0.00 3.51
1880 3433 1.280133 CTGGAGAGTGAAAGGCATCCA 59.720 52.381 0.00 0.00 35.60 3.41
1912 3465 8.508875 TCGTTCTTATCCTAATGTTTGGTTTTC 58.491 33.333 0.00 0.00 0.00 2.29
1916 3469 9.010029 TCTTATCCTAATGTTTGGTTTTCTGTC 57.990 33.333 0.00 0.00 0.00 3.51
1968 3526 0.107993 AGTGGATGATGCAGGTGTCG 60.108 55.000 0.00 0.00 0.00 4.35
2003 3561 1.464023 CGCATACTTGAAACACCAGCG 60.464 52.381 0.00 0.00 36.62 5.18
2041 3599 4.649674 CACTCCATAGTAGGTTCAGGCTTA 59.350 45.833 0.00 0.00 33.48 3.09
2073 3631 0.035458 GCCGGCCTATATTGAGTGCT 59.965 55.000 18.11 0.00 0.00 4.40
2074 3632 1.800805 CCGGCCTATATTGAGTGCTG 58.199 55.000 0.00 0.00 0.00 4.41
2076 3634 2.224281 CCGGCCTATATTGAGTGCTGAA 60.224 50.000 0.00 0.00 0.00 3.02
2092 3650 5.307456 AGTGCTGAACCATCTATCATCTCAT 59.693 40.000 0.00 0.00 0.00 2.90
2101 3659 9.593565 AACCATCTATCATCTCATACAGTCTTA 57.406 33.333 0.00 0.00 0.00 2.10
2109 3667 6.818644 TCATCTCATACAGTCTTAAACCAAGC 59.181 38.462 0.00 0.00 33.94 4.01
2130 3688 3.486708 GCGACCGTTTCATCATATTTGCA 60.487 43.478 0.00 0.00 0.00 4.08
2139 3697 3.441222 TCATCATATTTGCATCCGATGGC 59.559 43.478 10.41 3.60 32.88 4.40
2148 3706 2.446848 ATCCGATGGCCTGTGGGAG 61.447 63.158 15.35 0.00 33.58 4.30
2197 3756 6.247165 CGAGATTTTCACAAAAATGAGCGTAG 59.753 38.462 1.13 0.00 43.48 3.51
2217 3776 2.143925 GTGTAAGCCTCCACACTTGTC 58.856 52.381 3.06 0.00 41.46 3.18
2223 3783 3.944087 AGCCTCCACACTTGTCTATTTC 58.056 45.455 0.00 0.00 0.00 2.17
2234 3794 7.064371 CACACTTGTCTATTTCCTCTCATTCAG 59.936 40.741 0.00 0.00 0.00 3.02
2255 3815 9.956720 ATTCAGCTTGTTTATGTAATAATGCTC 57.043 29.630 0.00 0.00 38.83 4.26
2257 3817 7.775093 TCAGCTTGTTTATGTAATAATGCTCCT 59.225 33.333 0.00 0.00 38.83 3.69
2268 3828 0.883833 AATGCTCCTTGGCTTTCACG 59.116 50.000 0.00 0.00 0.00 4.35
2287 3847 3.935203 CACGTGTTGCCTAAGATGATCTT 59.065 43.478 12.86 12.86 40.35 2.40
2288 3848 4.393062 CACGTGTTGCCTAAGATGATCTTT 59.607 41.667 13.54 0.00 37.89 2.52
2289 3849 5.003804 ACGTGTTGCCTAAGATGATCTTTT 58.996 37.500 13.54 0.00 37.89 2.27
2297 3857 8.225603 TGCCTAAGATGATCTTTTAATCAACC 57.774 34.615 13.54 0.00 39.04 3.77
2304 3864 9.374838 AGATGATCTTTTAATCAACCAATTTGC 57.625 29.630 0.00 0.00 39.04 3.68
2314 3874 6.757897 ATCAACCAATTTGCGAAATCTCTA 57.242 33.333 0.00 0.00 34.88 2.43
2322 3882 4.350368 TTGCGAAATCTCTATGGCCATA 57.650 40.909 24.02 24.02 0.00 2.74
2337 3897 4.214310 TGGCCATACCATTTACCATCAAG 58.786 43.478 0.00 0.00 46.36 3.02
2339 3899 5.103898 TGGCCATACCATTTACCATCAAGTA 60.104 40.000 0.00 0.00 46.36 2.24
2340 3900 5.240844 GGCCATACCATTTACCATCAAGTAC 59.759 44.000 0.00 0.00 38.86 2.73
2341 3901 5.825679 GCCATACCATTTACCATCAAGTACA 59.174 40.000 0.00 0.00 0.00 2.90
2368 3928 9.120538 TCTATTAAATCTGTATGCCTTCAAACC 57.879 33.333 0.00 0.00 0.00 3.27
2370 3930 7.775053 TTAAATCTGTATGCCTTCAAACCTT 57.225 32.000 0.00 0.00 0.00 3.50
2373 3933 6.670695 ATCTGTATGCCTTCAAACCTTTTT 57.329 33.333 0.00 0.00 0.00 1.94
2375 3935 7.775053 TCTGTATGCCTTCAAACCTTTTTAT 57.225 32.000 0.00 0.00 0.00 1.40
2376 3936 7.601856 TCTGTATGCCTTCAAACCTTTTTATG 58.398 34.615 0.00 0.00 0.00 1.90
2377 3937 6.162777 TGTATGCCTTCAAACCTTTTTATGC 58.837 36.000 0.00 0.00 0.00 3.14
2378 3938 4.679373 TGCCTTCAAACCTTTTTATGCA 57.321 36.364 0.00 0.00 0.00 3.96
2379 3939 5.028549 TGCCTTCAAACCTTTTTATGCAA 57.971 34.783 0.00 0.00 0.00 4.08
2380 3940 5.431765 TGCCTTCAAACCTTTTTATGCAAA 58.568 33.333 0.00 0.00 0.00 3.68
2381 3941 5.295540 TGCCTTCAAACCTTTTTATGCAAAC 59.704 36.000 0.00 0.00 0.00 2.93
2382 3942 5.277779 GCCTTCAAACCTTTTTATGCAAACC 60.278 40.000 0.00 0.00 0.00 3.27
2383 3943 6.054941 CCTTCAAACCTTTTTATGCAAACCT 58.945 36.000 0.00 0.00 0.00 3.50
2397 3957 8.500753 TTATGCAAACCTATTGTTACAGTAGG 57.499 34.615 25.79 25.79 45.47 3.18
2401 3961 6.093633 GCAAACCTATTGTTACAGTAGGGAAG 59.906 42.308 29.05 20.64 44.66 3.46
2406 3966 7.664318 ACCTATTGTTACAGTAGGGAAGTTTTG 59.336 37.037 29.05 8.85 44.66 2.44
2422 3983 7.125755 GGAAGTTTTGCTTTGCATTAGAAAAC 58.874 34.615 17.49 17.49 38.76 2.43
2424 3985 8.940768 AAGTTTTGCTTTGCATTAGAAAACTA 57.059 26.923 22.14 5.69 40.98 2.24
2425 3986 8.579682 AGTTTTGCTTTGCATTAGAAAACTAG 57.420 30.769 21.44 0.00 40.45 2.57
2429 3990 5.106157 TGCTTTGCATTAGAAAACTAGGAGC 60.106 40.000 0.00 0.00 31.71 4.70
2430 3991 5.545658 TTTGCATTAGAAAACTAGGAGCG 57.454 39.130 0.00 0.00 0.00 5.03
2432 3993 2.936498 GCATTAGAAAACTAGGAGCGCA 59.064 45.455 11.47 0.00 0.00 6.09
2433 3994 3.561725 GCATTAGAAAACTAGGAGCGCAT 59.438 43.478 11.47 0.00 0.00 4.73
2437 3998 0.618458 AAAACTAGGAGCGCATGGGA 59.382 50.000 14.90 0.00 0.00 4.37
2441 4002 1.212935 ACTAGGAGCGCATGGGAAATT 59.787 47.619 14.90 0.00 0.00 1.82
2443 4004 0.323725 AGGAGCGCATGGGAAATTGT 60.324 50.000 14.90 0.00 0.00 2.71
2445 4006 1.748493 GGAGCGCATGGGAAATTGTTA 59.252 47.619 14.90 0.00 0.00 2.41
2456 4017 9.087424 GCATGGGAAATTGTTATTAACTCTTTC 57.913 33.333 17.19 17.19 34.58 2.62
2457 4018 9.586435 CATGGGAAATTGTTATTAACTCTTTCC 57.414 33.333 25.80 25.80 43.76 3.13
2471 4805 8.848474 TTAACTCTTTCCTAACTTCATCCAAG 57.152 34.615 0.00 0.00 38.21 3.61
2490 4824 5.998454 CAAGCCATGGAAGTAGTTATCTG 57.002 43.478 18.40 0.00 0.00 2.90
2491 4825 4.078639 AGCCATGGAAGTAGTTATCTGC 57.921 45.455 18.40 0.00 0.00 4.26
2492 4826 3.455910 AGCCATGGAAGTAGTTATCTGCA 59.544 43.478 18.40 0.00 0.00 4.41
2498 4834 5.252547 TGGAAGTAGTTATCTGCATGCAAA 58.747 37.500 22.88 9.58 0.00 3.68
2499 4835 5.709631 TGGAAGTAGTTATCTGCATGCAAAA 59.290 36.000 22.88 13.33 0.00 2.44
2511 4847 2.609350 CATGCAAAATGTGTACTGGGC 58.391 47.619 0.00 0.00 0.00 5.36
2512 4848 1.993956 TGCAAAATGTGTACTGGGCT 58.006 45.000 0.00 0.00 0.00 5.19
2513 4849 3.147553 TGCAAAATGTGTACTGGGCTA 57.852 42.857 0.00 0.00 0.00 3.93
2514 4850 3.696045 TGCAAAATGTGTACTGGGCTAT 58.304 40.909 0.00 0.00 0.00 2.97
2516 4852 4.082300 TGCAAAATGTGTACTGGGCTATTG 60.082 41.667 0.00 0.00 0.00 1.90
2517 4853 4.082245 GCAAAATGTGTACTGGGCTATTGT 60.082 41.667 0.00 0.00 0.00 2.71
2518 4854 5.124776 GCAAAATGTGTACTGGGCTATTGTA 59.875 40.000 0.00 0.00 0.00 2.41
2519 4855 6.677920 GCAAAATGTGTACTGGGCTATTGTAG 60.678 42.308 0.00 0.00 0.00 2.74
2521 4857 3.446968 TGTGTACTGGGCTATTGTAGGT 58.553 45.455 0.00 0.00 0.00 3.08
2522 4858 4.612401 TGTGTACTGGGCTATTGTAGGTA 58.388 43.478 0.00 0.00 0.00 3.08
2523 4859 4.403432 TGTGTACTGGGCTATTGTAGGTAC 59.597 45.833 0.00 0.00 0.00 3.34
2524 4860 4.403432 GTGTACTGGGCTATTGTAGGTACA 59.597 45.833 0.00 0.00 36.68 2.90
2536 4872 5.971895 TTGTAGGTACAAAGAACGAACAC 57.028 39.130 0.00 0.00 42.66 3.32
2537 4873 4.043750 TGTAGGTACAAAGAACGAACACG 58.956 43.478 0.00 0.00 32.40 4.49
2538 4874 2.476821 AGGTACAAAGAACGAACACGG 58.523 47.619 0.00 0.00 0.00 4.94
2539 4875 1.528161 GGTACAAAGAACGAACACGGG 59.472 52.381 0.00 0.00 0.00 5.28
2551 4887 3.383761 CGAACACGGGTTTGTTACTAGT 58.616 45.455 3.63 0.00 39.88 2.57
2552 4888 3.803778 CGAACACGGGTTTGTTACTAGTT 59.196 43.478 3.63 0.00 39.88 2.24
2553 4889 4.981674 CGAACACGGGTTTGTTACTAGTTA 59.018 41.667 3.63 0.00 39.88 2.24
2554 4890 5.117592 CGAACACGGGTTTGTTACTAGTTAG 59.882 44.000 3.63 0.00 39.88 2.34
2555 4891 5.789643 ACACGGGTTTGTTACTAGTTAGA 57.210 39.130 0.00 0.00 0.00 2.10
2556 4892 5.776744 ACACGGGTTTGTTACTAGTTAGAG 58.223 41.667 0.00 0.00 0.00 2.43
2559 4911 6.364435 CACGGGTTTGTTACTAGTTAGAGTTC 59.636 42.308 0.00 0.00 0.00 3.01
2563 4915 8.249638 GGGTTTGTTACTAGTTAGAGTTCCTAG 58.750 40.741 0.00 0.00 35.41 3.02
2564 4916 8.249638 GGTTTGTTACTAGTTAGAGTTCCTAGG 58.750 40.741 0.82 0.82 33.93 3.02
2596 4950 5.007626 GCCGTATGCATTTCTGTTCTTGATA 59.992 40.000 3.54 0.00 40.77 2.15
2597 4951 6.458206 GCCGTATGCATTTCTGTTCTTGATAA 60.458 38.462 3.54 0.00 40.77 1.75
2610 4964 9.288576 TCTGTTCTTGATAATCTTGATTTGTGT 57.711 29.630 0.95 0.00 0.00 3.72
2620 5068 9.903682 ATAATCTTGATTTGTGTAATGCTATGC 57.096 29.630 0.95 0.00 0.00 3.14
2623 5071 4.907579 TGATTTGTGTAATGCTATGCGTG 58.092 39.130 0.00 0.00 0.00 5.34
2626 5074 4.598406 TTGTGTAATGCTATGCGTGAAG 57.402 40.909 0.00 0.00 0.00 3.02
2638 5086 2.240230 CGTGAAGCCGCCAAGTAAA 58.760 52.632 0.00 0.00 0.00 2.01
2639 5087 0.165944 CGTGAAGCCGCCAAGTAAAG 59.834 55.000 0.00 0.00 0.00 1.85
2640 5088 1.235724 GTGAAGCCGCCAAGTAAAGT 58.764 50.000 0.00 0.00 0.00 2.66
2641 5089 1.607148 GTGAAGCCGCCAAGTAAAGTT 59.393 47.619 0.00 0.00 0.00 2.66
2643 5091 3.439129 GTGAAGCCGCCAAGTAAAGTTAT 59.561 43.478 0.00 0.00 0.00 1.89
2644 5092 3.438781 TGAAGCCGCCAAGTAAAGTTATG 59.561 43.478 0.00 0.00 0.00 1.90
2645 5093 3.343941 AGCCGCCAAGTAAAGTTATGA 57.656 42.857 0.00 0.00 0.00 2.15
2654 5102 6.537660 GCCAAGTAAAGTTATGAAGATACGGT 59.462 38.462 0.00 0.00 0.00 4.83
2655 5103 7.065443 GCCAAGTAAAGTTATGAAGATACGGTT 59.935 37.037 0.00 0.00 0.00 4.44
2666 5114 7.630242 ATGAAGATACGGTTGACAATTTGAT 57.370 32.000 2.79 0.00 0.00 2.57
2673 5121 6.024552 ACGGTTGACAATTTGATATGCTTT 57.975 33.333 2.79 0.00 0.00 3.51
2674 5122 6.454795 ACGGTTGACAATTTGATATGCTTTT 58.545 32.000 2.79 0.00 0.00 2.27
2693 5141 3.569194 TTTTGACCAAGCTGTAGTCCA 57.431 42.857 8.17 0.00 0.00 4.02
2703 5172 5.178061 CAAGCTGTAGTCCATGTAATGTGA 58.822 41.667 0.00 0.00 44.81 3.58
2725 5194 7.871973 TGTGAACCATAAATTTGATTCACTTGG 59.128 33.333 23.92 12.61 43.95 3.61
2726 5195 7.872483 GTGAACCATAAATTTGATTCACTTGGT 59.128 33.333 20.21 10.60 41.61 3.67
2735 5204 4.835284 TGATTCACTTGGTATACCTGCA 57.165 40.909 22.41 4.05 36.82 4.41
2757 5226 6.756074 TGCAAGGATAGTTTTTGTGTTTTCTG 59.244 34.615 0.00 0.00 0.00 3.02
2758 5227 6.978080 GCAAGGATAGTTTTTGTGTTTTCTGA 59.022 34.615 0.00 0.00 0.00 3.27
2759 5228 7.168135 GCAAGGATAGTTTTTGTGTTTTCTGAG 59.832 37.037 0.00 0.00 0.00 3.35
2760 5229 8.405531 CAAGGATAGTTTTTGTGTTTTCTGAGA 58.594 33.333 0.00 0.00 0.00 3.27
2762 5231 7.993183 AGGATAGTTTTTGTGTTTTCTGAGAGA 59.007 33.333 0.00 0.00 0.00 3.10
2763 5232 8.621286 GGATAGTTTTTGTGTTTTCTGAGAGAA 58.379 33.333 0.00 0.00 31.28 2.87
2800 5338 0.112995 TGACTGGCATGCCTTTTCCT 59.887 50.000 35.53 12.54 36.94 3.36
2803 5341 2.037641 GACTGGCATGCCTTTTCCTTTT 59.962 45.455 35.53 10.30 36.94 2.27
2805 5343 3.645687 ACTGGCATGCCTTTTCCTTTTTA 59.354 39.130 35.53 11.38 36.94 1.52
2807 5345 5.221904 ACTGGCATGCCTTTTCCTTTTTATT 60.222 36.000 35.53 3.82 36.94 1.40
2819 5357 6.678568 TTCCTTTTTATTCAGGGAATTGCA 57.321 33.333 0.00 0.00 33.95 4.08
2848 5386 4.626042 CTTATAGAAGCAGCTGTACAGGG 58.374 47.826 23.95 1.01 0.00 4.45
2854 5392 3.775654 AGCTGTACAGGGAGCGGC 61.776 66.667 23.95 8.87 40.34 6.53
2883 5421 4.599047 ACGTAAGATGCGTTACTCAGATC 58.401 43.478 0.00 0.00 39.79 2.75
2887 5425 4.991153 AGATGCGTTACTCAGATCTCAA 57.009 40.909 0.00 0.00 0.00 3.02
2921 5459 1.802636 CGTTCGCAGGCATTTCCAT 59.197 52.632 0.00 0.00 37.29 3.41
2954 5492 4.992951 ACCGTGGTTGTCTTGTTTATAGAC 59.007 41.667 0.00 0.00 41.86 2.59
2968 5506 5.606749 TGTTTATAGACCATGGCCTATCAGT 59.393 40.000 22.44 4.13 0.00 3.41
2971 5509 1.765314 AGACCATGGCCTATCAGTGAC 59.235 52.381 13.04 0.00 0.00 3.67
2979 5517 3.713248 TGGCCTATCAGTGACAGATCATT 59.287 43.478 3.32 0.00 37.14 2.57
2990 5528 6.204301 CAGTGACAGATCATTCACAAGAAAGT 59.796 38.462 22.06 3.98 43.94 2.66
2992 5530 5.702670 TGACAGATCATTCACAAGAAAGTCC 59.297 40.000 0.00 0.00 37.29 3.85
2995 5533 3.485463 TCATTCACAAGAAAGTCCGGT 57.515 42.857 0.00 0.00 37.29 5.28
3005 5543 2.375509 AGAAAGTCCGGTCCTTTCCATT 59.624 45.455 29.25 17.67 45.72 3.16
3021 5559 1.208535 CCATTAGTGTACCTTCGGGCA 59.791 52.381 0.00 0.00 39.10 5.36
3046 5584 2.402640 GATCTAGCCAGGTCGTAACG 57.597 55.000 0.00 0.00 0.00 3.18
3064 5602 2.634600 ACGTTGGTTTTACTGTGCTCA 58.365 42.857 0.00 0.00 0.00 4.26
3071 5609 0.753867 TTTACTGTGCTCACCCGTCA 59.246 50.000 0.00 0.00 0.00 4.35
3077 5615 1.346395 TGTGCTCACCCGTCAAACTAT 59.654 47.619 0.00 0.00 0.00 2.12
3078 5616 1.732259 GTGCTCACCCGTCAAACTATG 59.268 52.381 0.00 0.00 0.00 2.23
3079 5617 1.346395 TGCTCACCCGTCAAACTATGT 59.654 47.619 0.00 0.00 0.00 2.29
3080 5618 1.732259 GCTCACCCGTCAAACTATGTG 59.268 52.381 0.00 0.00 0.00 3.21
3081 5619 2.870435 GCTCACCCGTCAAACTATGTGT 60.870 50.000 0.00 0.00 0.00 3.72
3082 5620 2.736721 CTCACCCGTCAAACTATGTGTG 59.263 50.000 0.00 0.00 0.00 3.82
3083 5621 2.365941 TCACCCGTCAAACTATGTGTGA 59.634 45.455 0.00 0.00 0.00 3.58
3085 5623 3.125146 CACCCGTCAAACTATGTGTGATG 59.875 47.826 3.73 3.73 36.76 3.07
3086 5624 3.007506 ACCCGTCAAACTATGTGTGATGA 59.992 43.478 10.66 0.00 38.64 2.92
3087 5625 4.191544 CCCGTCAAACTATGTGTGATGAT 58.808 43.478 10.66 0.00 38.64 2.45
3088 5626 4.635765 CCCGTCAAACTATGTGTGATGATT 59.364 41.667 10.66 0.00 38.64 2.57
3089 5627 5.815222 CCCGTCAAACTATGTGTGATGATTA 59.185 40.000 10.66 0.00 38.64 1.75
3090 5628 6.238103 CCCGTCAAACTATGTGTGATGATTAC 60.238 42.308 10.66 0.00 38.64 1.89
3091 5629 6.535150 CCGTCAAACTATGTGTGATGATTACT 59.465 38.462 10.66 0.00 38.64 2.24
3092 5630 7.394099 CGTCAAACTATGTGTGATGATTACTG 58.606 38.462 4.54 0.00 38.64 2.74
3093 5631 7.275560 CGTCAAACTATGTGTGATGATTACTGA 59.724 37.037 4.54 0.00 38.64 3.41
3094 5632 9.102757 GTCAAACTATGTGTGATGATTACTGAT 57.897 33.333 0.00 0.00 32.03 2.90
3099 5638 8.260114 ACTATGTGTGATGATTACTGATTCACA 58.740 33.333 0.24 0.24 43.07 3.58
3132 5671 2.862530 GCTGTGCTCGTCTGTCAAACTA 60.863 50.000 0.00 0.00 0.00 2.24
3137 5676 4.559251 GTGCTCGTCTGTCAAACTATGTAG 59.441 45.833 0.00 0.00 0.00 2.74
3138 5677 4.106197 GCTCGTCTGTCAAACTATGTAGG 58.894 47.826 0.00 0.00 0.00 3.18
3139 5678 4.142447 GCTCGTCTGTCAAACTATGTAGGA 60.142 45.833 0.00 0.00 0.00 2.94
3140 5679 5.450688 GCTCGTCTGTCAAACTATGTAGGAT 60.451 44.000 0.00 0.00 0.00 3.24
3141 5680 5.891451 TCGTCTGTCAAACTATGTAGGATG 58.109 41.667 0.00 0.00 0.00 3.51
3142 5681 5.650703 TCGTCTGTCAAACTATGTAGGATGA 59.349 40.000 0.00 0.00 0.00 2.92
3143 5682 6.321435 TCGTCTGTCAAACTATGTAGGATGAT 59.679 38.462 1.97 0.00 0.00 2.45
3144 5683 6.419116 CGTCTGTCAAACTATGTAGGATGATG 59.581 42.308 1.97 0.00 0.00 3.07
3145 5684 7.268586 GTCTGTCAAACTATGTAGGATGATGT 58.731 38.462 1.97 0.00 0.00 3.06
3146 5685 7.436673 GTCTGTCAAACTATGTAGGATGATGTC 59.563 40.741 1.97 0.00 0.00 3.06
3147 5686 7.343057 TCTGTCAAACTATGTAGGATGATGTCT 59.657 37.037 1.97 0.00 0.00 3.41
3148 5687 8.533569 TGTCAAACTATGTAGGATGATGTCTA 57.466 34.615 1.97 0.00 0.00 2.59
3149 5688 8.977412 TGTCAAACTATGTAGGATGATGTCTAA 58.023 33.333 1.97 0.00 0.00 2.10
3150 5689 9.988815 GTCAAACTATGTAGGATGATGTCTAAT 57.011 33.333 1.97 0.00 0.00 1.73
3152 5691 9.429359 CAAACTATGTAGGATGATGTCTAATCC 57.571 37.037 0.00 0.00 42.39 3.01
3153 5692 7.726033 ACTATGTAGGATGATGTCTAATCCC 57.274 40.000 0.00 0.00 42.97 3.85
3154 5693 7.248976 ACTATGTAGGATGATGTCTAATCCCA 58.751 38.462 0.00 0.00 42.97 4.37
3155 5694 6.617782 ATGTAGGATGATGTCTAATCCCAG 57.382 41.667 0.00 0.00 42.97 4.45
3156 5695 4.284490 TGTAGGATGATGTCTAATCCCAGC 59.716 45.833 0.00 0.00 42.97 4.85
3157 5696 2.641815 AGGATGATGTCTAATCCCAGCC 59.358 50.000 0.00 0.00 42.97 4.85
3158 5697 2.641815 GGATGATGTCTAATCCCAGCCT 59.358 50.000 0.00 0.00 37.04 4.58
3159 5698 3.073650 GGATGATGTCTAATCCCAGCCTT 59.926 47.826 0.00 0.00 37.04 4.35
3160 5699 3.565764 TGATGTCTAATCCCAGCCTTG 57.434 47.619 0.00 0.00 0.00 3.61
3161 5700 3.114606 TGATGTCTAATCCCAGCCTTGA 58.885 45.455 0.00 0.00 0.00 3.02
3162 5701 3.523157 TGATGTCTAATCCCAGCCTTGAA 59.477 43.478 0.00 0.00 0.00 2.69
3163 5702 4.018506 TGATGTCTAATCCCAGCCTTGAAA 60.019 41.667 0.00 0.00 0.00 2.69
3164 5703 4.380843 TGTCTAATCCCAGCCTTGAAAA 57.619 40.909 0.00 0.00 0.00 2.29
3165 5704 4.079253 TGTCTAATCCCAGCCTTGAAAAC 58.921 43.478 0.00 0.00 0.00 2.43
3166 5705 3.444034 GTCTAATCCCAGCCTTGAAAACC 59.556 47.826 0.00 0.00 0.00 3.27
3167 5706 2.702270 AATCCCAGCCTTGAAAACCT 57.298 45.000 0.00 0.00 0.00 3.50
3168 5707 2.222227 ATCCCAGCCTTGAAAACCTC 57.778 50.000 0.00 0.00 0.00 3.85
3169 5708 1.149101 TCCCAGCCTTGAAAACCTCT 58.851 50.000 0.00 0.00 0.00 3.69
3170 5709 1.499007 TCCCAGCCTTGAAAACCTCTT 59.501 47.619 0.00 0.00 0.00 2.85
3171 5710 2.091333 TCCCAGCCTTGAAAACCTCTTT 60.091 45.455 0.00 0.00 0.00 2.52
3172 5711 2.297315 CCCAGCCTTGAAAACCTCTTTC 59.703 50.000 0.00 0.00 0.00 2.62
3173 5712 3.225940 CCAGCCTTGAAAACCTCTTTCT 58.774 45.455 0.00 0.00 0.00 2.52
3174 5713 3.254411 CCAGCCTTGAAAACCTCTTTCTC 59.746 47.826 0.00 0.00 0.00 2.87
3175 5714 3.254411 CAGCCTTGAAAACCTCTTTCTCC 59.746 47.826 0.00 0.00 0.00 3.71
3176 5715 2.226674 GCCTTGAAAACCTCTTTCTCCG 59.773 50.000 0.00 0.00 0.00 4.63
3177 5716 3.740115 CCTTGAAAACCTCTTTCTCCGA 58.260 45.455 0.00 0.00 0.00 4.55
3178 5717 4.134563 CCTTGAAAACCTCTTTCTCCGAA 58.865 43.478 0.00 0.00 0.00 4.30
3179 5718 4.214332 CCTTGAAAACCTCTTTCTCCGAAG 59.786 45.833 0.00 0.00 0.00 3.79
3180 5719 4.682778 TGAAAACCTCTTTCTCCGAAGA 57.317 40.909 0.00 0.00 34.63 2.87
3181 5720 5.031066 TGAAAACCTCTTTCTCCGAAGAA 57.969 39.130 0.00 0.00 39.78 2.52
3182 5721 5.621193 TGAAAACCTCTTTCTCCGAAGAAT 58.379 37.500 0.00 0.00 41.12 2.40
3183 5722 5.470098 TGAAAACCTCTTTCTCCGAAGAATG 59.530 40.000 0.00 0.00 41.12 2.67
3184 5723 4.625607 AACCTCTTTCTCCGAAGAATGT 57.374 40.909 0.00 0.00 41.12 2.71
3185 5724 3.931578 ACCTCTTTCTCCGAAGAATGTG 58.068 45.455 0.00 0.00 41.12 3.21
3186 5725 3.265791 CCTCTTTCTCCGAAGAATGTGG 58.734 50.000 4.42 4.42 41.12 4.17
3187 5726 2.675348 CTCTTTCTCCGAAGAATGTGGC 59.325 50.000 0.00 0.00 41.12 5.01
3188 5727 2.303022 TCTTTCTCCGAAGAATGTGGCT 59.697 45.455 0.00 0.00 41.12 4.75
3189 5728 2.859165 TTCTCCGAAGAATGTGGCTT 57.141 45.000 0.00 0.00 36.59 4.35
3190 5729 2.859165 TCTCCGAAGAATGTGGCTTT 57.141 45.000 0.00 0.00 0.00 3.51
3191 5730 3.973206 TCTCCGAAGAATGTGGCTTTA 57.027 42.857 0.00 0.00 0.00 1.85
3192 5731 4.280436 TCTCCGAAGAATGTGGCTTTAA 57.720 40.909 0.00 0.00 0.00 1.52
3193 5732 4.000988 TCTCCGAAGAATGTGGCTTTAAC 58.999 43.478 0.00 0.00 0.00 2.01
3194 5733 3.745799 TCCGAAGAATGTGGCTTTAACA 58.254 40.909 0.00 0.00 0.00 2.41
3195 5734 3.500680 TCCGAAGAATGTGGCTTTAACAC 59.499 43.478 0.00 0.00 39.26 3.32
3220 5759 3.338818 TTTTTCTTCTGCAGAACGCTG 57.661 42.857 25.16 15.32 41.56 5.18
3221 5760 1.229428 TTTCTTCTGCAGAACGCTGG 58.771 50.000 25.16 14.95 41.56 4.85
3222 5761 0.603707 TTCTTCTGCAGAACGCTGGG 60.604 55.000 25.16 14.23 42.53 4.45
3223 5762 2.669569 TTCTGCAGAACGCTGGGC 60.670 61.111 25.16 0.00 42.53 5.36
3224 5763 3.182590 TTCTGCAGAACGCTGGGCT 62.183 57.895 25.16 0.00 42.53 5.19
3225 5764 1.826340 TTCTGCAGAACGCTGGGCTA 61.826 55.000 25.16 0.00 42.53 3.93
3226 5765 1.153289 CTGCAGAACGCTGGGCTAT 60.153 57.895 8.42 0.00 42.53 2.97
3227 5766 1.434622 CTGCAGAACGCTGGGCTATG 61.435 60.000 8.42 0.00 42.53 2.23
3228 5767 1.450312 GCAGAACGCTGGGCTATGT 60.450 57.895 0.00 0.00 42.53 2.29
3229 5768 1.432270 GCAGAACGCTGGGCTATGTC 61.432 60.000 0.00 0.00 42.53 3.06
3230 5769 1.141881 AGAACGCTGGGCTATGTCG 59.858 57.895 0.00 0.00 0.00 4.35
3231 5770 1.153628 GAACGCTGGGCTATGTCGT 60.154 57.895 0.00 0.00 34.63 4.34
3232 5771 0.739813 GAACGCTGGGCTATGTCGTT 60.740 55.000 5.65 5.65 44.59 3.85
3233 5772 1.019278 AACGCTGGGCTATGTCGTTG 61.019 55.000 5.27 0.00 41.09 4.10
3234 5773 2.173669 CGCTGGGCTATGTCGTTGG 61.174 63.158 0.00 0.00 0.00 3.77
3235 5774 1.078426 GCTGGGCTATGTCGTTGGT 60.078 57.895 0.00 0.00 0.00 3.67
3236 5775 0.177141 GCTGGGCTATGTCGTTGGTA 59.823 55.000 0.00 0.00 0.00 3.25
3237 5776 1.935933 CTGGGCTATGTCGTTGGTAC 58.064 55.000 0.00 0.00 0.00 3.34
3238 5777 1.480954 CTGGGCTATGTCGTTGGTACT 59.519 52.381 0.00 0.00 0.00 2.73
3239 5778 1.206132 TGGGCTATGTCGTTGGTACTG 59.794 52.381 0.00 0.00 0.00 2.74
3240 5779 1.287425 GGCTATGTCGTTGGTACTGC 58.713 55.000 0.00 0.00 0.00 4.40
3241 5780 0.921347 GCTATGTCGTTGGTACTGCG 59.079 55.000 0.00 0.00 0.00 5.18
3242 5781 1.468565 GCTATGTCGTTGGTACTGCGA 60.469 52.381 0.00 0.00 33.74 5.10
3243 5782 2.798499 GCTATGTCGTTGGTACTGCGAT 60.798 50.000 9.33 0.24 37.48 4.58
3244 5783 1.640428 ATGTCGTTGGTACTGCGATG 58.360 50.000 9.33 0.00 37.48 3.84
3245 5784 0.315886 TGTCGTTGGTACTGCGATGT 59.684 50.000 9.33 0.00 37.48 3.06
3246 5785 0.713883 GTCGTTGGTACTGCGATGTG 59.286 55.000 9.33 0.00 37.48 3.21
3247 5786 0.315886 TCGTTGGTACTGCGATGTGT 59.684 50.000 0.00 0.00 31.70 3.72
3248 5787 0.438445 CGTTGGTACTGCGATGTGTG 59.562 55.000 0.00 0.00 0.00 3.82
3249 5788 1.508632 GTTGGTACTGCGATGTGTGT 58.491 50.000 0.00 0.00 0.00 3.72
3250 5789 1.459592 GTTGGTACTGCGATGTGTGTC 59.540 52.381 0.00 0.00 0.00 3.67
3251 5790 0.388006 TGGTACTGCGATGTGTGTCG 60.388 55.000 0.00 0.00 44.14 4.35
3257 5796 3.554232 CGATGTGTGTCGCTGCTT 58.446 55.556 0.00 0.00 34.56 3.91
3258 5797 1.131218 CGATGTGTGTCGCTGCTTG 59.869 57.895 0.00 0.00 34.56 4.01
3259 5798 1.560004 CGATGTGTGTCGCTGCTTGT 61.560 55.000 0.00 0.00 34.56 3.16
3260 5799 0.588252 GATGTGTGTCGCTGCTTGTT 59.412 50.000 0.00 0.00 0.00 2.83
3261 5800 0.588252 ATGTGTGTCGCTGCTTGTTC 59.412 50.000 0.00 0.00 0.00 3.18
3262 5801 0.461870 TGTGTGTCGCTGCTTGTTCT 60.462 50.000 0.00 0.00 0.00 3.01
3263 5802 0.041839 GTGTGTCGCTGCTTGTTCTG 60.042 55.000 0.00 0.00 0.00 3.02
3264 5803 0.179086 TGTGTCGCTGCTTGTTCTGA 60.179 50.000 0.00 0.00 0.00 3.27
3265 5804 0.937304 GTGTCGCTGCTTGTTCTGAA 59.063 50.000 0.00 0.00 0.00 3.02
3266 5805 0.937304 TGTCGCTGCTTGTTCTGAAC 59.063 50.000 13.49 13.49 0.00 3.18
3267 5806 1.221414 GTCGCTGCTTGTTCTGAACT 58.779 50.000 20.18 0.00 0.00 3.01
3268 5807 2.223947 TGTCGCTGCTTGTTCTGAACTA 60.224 45.455 20.18 12.58 0.00 2.24
3269 5808 2.410053 GTCGCTGCTTGTTCTGAACTAG 59.590 50.000 22.16 22.16 37.32 2.57
3270 5809 2.035961 TCGCTGCTTGTTCTGAACTAGT 59.964 45.455 25.24 0.00 36.75 2.57
3271 5810 3.254903 TCGCTGCTTGTTCTGAACTAGTA 59.745 43.478 25.24 21.67 36.75 1.82
3272 5811 3.365220 CGCTGCTTGTTCTGAACTAGTAC 59.635 47.826 25.24 16.91 36.75 2.73
3273 5812 4.561105 GCTGCTTGTTCTGAACTAGTACT 58.439 43.478 25.24 0.00 36.75 2.73
3274 5813 4.991687 GCTGCTTGTTCTGAACTAGTACTT 59.008 41.667 25.24 0.00 36.75 2.24
3275 5814 5.107298 GCTGCTTGTTCTGAACTAGTACTTG 60.107 44.000 25.24 14.72 36.75 3.16
3276 5815 4.750098 TGCTTGTTCTGAACTAGTACTTGC 59.250 41.667 25.24 15.39 36.75 4.01
3277 5816 4.143305 GCTTGTTCTGAACTAGTACTTGCG 60.143 45.833 25.24 6.56 36.75 4.85
3278 5817 4.579454 TGTTCTGAACTAGTACTTGCGT 57.421 40.909 20.18 0.00 0.00 5.24
3279 5818 4.295870 TGTTCTGAACTAGTACTTGCGTG 58.704 43.478 20.18 0.00 0.00 5.34
3280 5819 3.570926 TCTGAACTAGTACTTGCGTGG 57.429 47.619 0.00 0.00 0.00 4.94
3281 5820 3.151554 TCTGAACTAGTACTTGCGTGGA 58.848 45.455 0.00 0.00 0.00 4.02
3282 5821 3.762288 TCTGAACTAGTACTTGCGTGGAT 59.238 43.478 0.00 0.00 0.00 3.41
3283 5822 4.945543 TCTGAACTAGTACTTGCGTGGATA 59.054 41.667 0.00 0.00 0.00 2.59
3284 5823 4.990257 TGAACTAGTACTTGCGTGGATAC 58.010 43.478 0.00 0.00 0.00 2.24
3312 5851 5.597813 ACACGACTTGTTCTTGATCATTC 57.402 39.130 0.00 0.00 33.09 2.67
3313 5852 5.300752 ACACGACTTGTTCTTGATCATTCT 58.699 37.500 0.00 0.00 33.09 2.40
3314 5853 5.760253 ACACGACTTGTTCTTGATCATTCTT 59.240 36.000 0.00 0.00 33.09 2.52
3315 5854 6.929049 ACACGACTTGTTCTTGATCATTCTTA 59.071 34.615 0.00 0.00 33.09 2.10
3316 5855 7.095607 ACACGACTTGTTCTTGATCATTCTTAC 60.096 37.037 0.00 0.00 33.09 2.34
3317 5856 6.089551 ACGACTTGTTCTTGATCATTCTTACG 59.910 38.462 0.00 0.00 0.00 3.18
3318 5857 6.089551 CGACTTGTTCTTGATCATTCTTACGT 59.910 38.462 0.00 0.00 0.00 3.57
3319 5858 7.121974 ACTTGTTCTTGATCATTCTTACGTG 57.878 36.000 0.00 0.00 0.00 4.49
3320 5859 6.706270 ACTTGTTCTTGATCATTCTTACGTGT 59.294 34.615 0.00 0.00 0.00 4.49
3321 5860 6.466308 TGTTCTTGATCATTCTTACGTGTG 57.534 37.500 0.00 0.00 0.00 3.82
3322 5861 5.989168 TGTTCTTGATCATTCTTACGTGTGT 59.011 36.000 0.00 0.00 0.00 3.72
3323 5862 7.149307 TGTTCTTGATCATTCTTACGTGTGTA 58.851 34.615 0.00 0.00 0.00 2.90
3324 5863 7.654116 TGTTCTTGATCATTCTTACGTGTGTAA 59.346 33.333 0.00 0.00 38.22 2.41
3325 5864 8.656849 GTTCTTGATCATTCTTACGTGTGTAAT 58.343 33.333 0.00 0.00 39.72 1.89
3326 5865 8.407457 TCTTGATCATTCTTACGTGTGTAATC 57.593 34.615 0.00 0.00 39.72 1.75
3327 5866 7.491372 TCTTGATCATTCTTACGTGTGTAATCC 59.509 37.037 0.00 0.00 39.72 3.01
3328 5867 6.635755 TGATCATTCTTACGTGTGTAATCCA 58.364 36.000 0.00 0.00 39.72 3.41
3329 5868 6.756542 TGATCATTCTTACGTGTGTAATCCAG 59.243 38.462 0.00 0.00 39.72 3.86
3330 5869 6.032956 TCATTCTTACGTGTGTAATCCAGT 57.967 37.500 0.00 0.00 39.72 4.00
3331 5870 6.460781 TCATTCTTACGTGTGTAATCCAGTT 58.539 36.000 0.00 0.00 39.72 3.16
3373 5912 4.506979 GGACAGCTAGTACAGGCTATCCTA 60.507 50.000 22.06 0.00 45.54 2.94
3399 5938 2.281484 TGGTCTTCGCCTGCCAAC 60.281 61.111 0.00 0.00 0.00 3.77
3442 5981 2.300967 GGCTCCATGGTGACCTCCA 61.301 63.158 17.98 0.00 42.01 3.86
3458 5997 1.757118 CTCCATCTTGCCGTCCTTCTA 59.243 52.381 0.00 0.00 0.00 2.10
3484 6023 2.027653 TGGTCTCGTTGCACCAATATGA 60.028 45.455 0.00 0.00 39.85 2.15
3486 6025 3.627577 GGTCTCGTTGCACCAATATGAAT 59.372 43.478 0.00 0.00 32.33 2.57
3488 6027 5.470098 GGTCTCGTTGCACCAATATGAATAT 59.530 40.000 0.00 0.00 32.33 1.28
3505 6044 5.195185 TGAATATCTTTGCTTGATGCCTCA 58.805 37.500 0.00 0.00 42.00 3.86
3517 6056 2.126071 GCCTCAGTACTTCGCGCA 60.126 61.111 8.75 0.00 0.00 6.09
3540 6079 1.379044 CTTGCCCCCTTAGCACCAG 60.379 63.158 0.00 0.00 40.69 4.00
3542 6081 1.431195 TTGCCCCCTTAGCACCAGAA 61.431 55.000 0.00 0.00 40.69 3.02
3639 6178 1.620323 GGTTTGCCTTGCCTTGATCTT 59.380 47.619 0.00 0.00 0.00 2.40
3692 6231 0.832135 TCCTGAGGAGGTCTTGCGTT 60.832 55.000 0.00 0.00 40.76 4.84
3744 6283 1.464997 GGTCTTGAATGCCTTGTCGAC 59.535 52.381 9.11 9.11 0.00 4.20
3771 6310 2.579201 CCGTACAGACCTGCCAGG 59.421 66.667 9.83 9.83 42.49 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 7.653311 TGTCCATAAATCATCGACTACAATGAG 59.347 37.037 0.00 0.00 35.49 2.90
41 42 3.313526 CGGCTAATAATATCCCATGCTGC 59.686 47.826 0.00 0.00 0.00 5.25
73 74 6.650427 ATTCTGCTGCAACAATCATCATAT 57.350 33.333 3.02 0.00 0.00 1.78
145 146 7.810282 CCCATCTTAAATATGTACTCTGACTCG 59.190 40.741 0.00 0.00 0.00 4.18
256 257 7.671302 TGATAATCCTATCTGCAACTACTTCC 58.329 38.462 0.00 0.00 35.79 3.46
358 359 2.666596 CTACCGCCTCCCATTGCTCC 62.667 65.000 0.00 0.00 0.00 4.70
359 360 1.227674 CTACCGCCTCCCATTGCTC 60.228 63.158 0.00 0.00 0.00 4.26
364 365 1.209747 GAACTTTCTACCGCCTCCCAT 59.790 52.381 0.00 0.00 0.00 4.00
415 428 3.117360 GGACATCTTTCATCCCTTGGGAT 60.117 47.826 15.08 15.08 0.00 3.85
436 449 9.232473 GGAAGCCTATTGTAAATAAGGATTAGG 57.768 37.037 0.00 0.00 37.83 2.69
520 533 4.018506 TGCTTCACCAAATCATCCTTCCTA 60.019 41.667 0.00 0.00 0.00 2.94
564 577 1.475403 ACCATACTCAGTCTCACCGG 58.525 55.000 0.00 0.00 0.00 5.28
571 584 5.790593 TCACCAAAGTAACCATACTCAGTC 58.209 41.667 0.00 0.00 41.57 3.51
591 628 2.829741 ACCTCTTCTGACAAGCTCAC 57.170 50.000 0.00 0.00 0.00 3.51
628 665 1.051812 CCTCCCCATCATAGCTCGTT 58.948 55.000 0.00 0.00 0.00 3.85
631 668 1.428869 ACACCTCCCCATCATAGCTC 58.571 55.000 0.00 0.00 0.00 4.09
633 670 1.212935 ACAACACCTCCCCATCATAGC 59.787 52.381 0.00 0.00 0.00 2.97
670 707 5.246203 GCACCTGATAAGATCCAGTACCATA 59.754 44.000 0.00 0.00 0.00 2.74
752 789 1.616865 TCGACGAACCTTGTCAGGAAT 59.383 47.619 0.00 0.00 44.19 3.01
801 838 1.062587 CGCTTTCCGGTATCTTTGCAG 59.937 52.381 0.00 0.00 0.00 4.41
821 858 1.201647 TCGAACTCGGGACATTCTGAC 59.798 52.381 0.00 0.00 40.29 3.51
834 871 5.435557 CACAAAACAGAAGTGATCGAACTC 58.564 41.667 0.00 0.00 35.33 3.01
976 1016 9.085250 CATTCAATCATAAGATATCTCAGTCGG 57.915 37.037 5.51 0.00 33.08 4.79
991 1031 7.451501 TTGTGTTCTCTTGCATTCAATCATA 57.548 32.000 0.00 0.00 0.00 2.15
1015 2004 7.062957 CCATCTTCCCCTTTGTACTCATATTT 58.937 38.462 0.00 0.00 0.00 1.40
1044 2033 2.005370 ACCCGTCAACAGGTTCTCTA 57.995 50.000 0.00 0.00 29.94 2.43
1048 2037 0.314935 TCGTACCCGTCAACAGGTTC 59.685 55.000 0.00 0.00 37.59 3.62
1055 2044 3.742385 AGGAAAAATTCGTACCCGTCAA 58.258 40.909 0.00 0.00 35.01 3.18
1099 2577 6.611613 TCACAGGAGAAACATAGATTGACT 57.388 37.500 0.00 0.00 0.00 3.41
1100 2578 6.238320 GCATCACAGGAGAAACATAGATTGAC 60.238 42.308 0.00 0.00 0.00 3.18
1110 2588 4.757149 ACAGTTTAGCATCACAGGAGAAAC 59.243 41.667 0.00 0.00 0.00 2.78
1116 2594 2.095059 GGCAACAGTTTAGCATCACAGG 60.095 50.000 0.00 0.00 0.00 4.00
1117 2595 2.413239 CGGCAACAGTTTAGCATCACAG 60.413 50.000 0.00 0.00 0.00 3.66
1131 2609 0.916086 ATCCCCTGATTACGGCAACA 59.084 50.000 0.00 0.00 0.00 3.33
1137 2615 6.525629 AGTGATAGAAAATCCCCTGATTACG 58.474 40.000 0.00 0.00 40.34 3.18
1147 2625 8.467598 TGCCGTATAGATAGTGATAGAAAATCC 58.532 37.037 0.00 0.00 0.00 3.01
1148 2626 9.509855 CTGCCGTATAGATAGTGATAGAAAATC 57.490 37.037 0.00 0.00 0.00 2.17
1149 2627 9.244292 TCTGCCGTATAGATAGTGATAGAAAAT 57.756 33.333 0.00 0.00 0.00 1.82
1158 2636 4.580868 TCTCCTCTGCCGTATAGATAGTG 58.419 47.826 0.00 0.00 0.00 2.74
1159 2637 4.532916 TCTCTCCTCTGCCGTATAGATAGT 59.467 45.833 0.00 0.00 0.00 2.12
1162 2640 4.523083 GATCTCTCCTCTGCCGTATAGAT 58.477 47.826 0.00 0.00 0.00 1.98
1163 2641 3.307833 GGATCTCTCCTCTGCCGTATAGA 60.308 52.174 0.00 0.00 38.65 1.98
1164 2642 3.013921 GGATCTCTCCTCTGCCGTATAG 58.986 54.545 0.00 0.00 38.65 1.31
1166 2644 1.917872 GGATCTCTCCTCTGCCGTAT 58.082 55.000 0.00 0.00 38.65 3.06
1168 2646 4.268720 GGATCTCTCCTCTGCCGT 57.731 61.111 0.00 0.00 38.65 5.68
1193 2671 2.281484 GGCTTGTCCGAGGCAACA 60.281 61.111 3.36 0.00 41.49 3.33
1205 2683 1.888018 CATTGCTGGTCAGGGCTTG 59.112 57.895 0.00 0.00 0.00 4.01
1207 2685 2.362120 GCATTGCTGGTCAGGGCT 60.362 61.111 0.16 0.00 0.00 5.19
1220 2752 0.035630 GAGGAGTGTCTGGCAGCATT 60.036 55.000 10.34 8.10 0.00 3.56
1233 2765 2.673523 GCCCATGCACAGAGGAGT 59.326 61.111 0.00 0.00 37.47 3.85
1274 2806 2.553028 GCTTTGAAGGTGGTCCATCTGA 60.553 50.000 5.09 0.00 33.17 3.27
1276 2808 1.272147 GGCTTTGAAGGTGGTCCATCT 60.272 52.381 0.00 0.00 33.17 2.90
1278 2810 0.609131 CGGCTTTGAAGGTGGTCCAT 60.609 55.000 0.00 0.00 35.89 3.41
1290 2822 1.212751 GGCTTTGTAGGCGGCTTTG 59.787 57.895 19.76 4.43 37.19 2.77
1303 2856 1.139853 GAGGAGATCATCACGGGCTTT 59.860 52.381 0.00 0.00 0.00 3.51
1307 2860 0.678395 CCAGAGGAGATCATCACGGG 59.322 60.000 0.00 0.00 0.00 5.28
1311 2864 1.126488 GCCACCAGAGGAGATCATCA 58.874 55.000 0.00 0.00 0.00 3.07
1356 2909 1.350071 CATAGGCCATGGAGAGCTCT 58.650 55.000 18.28 18.28 0.00 4.09
1449 3002 0.965363 GGCCACCGTGACCATCAAAT 60.965 55.000 0.00 0.00 0.00 2.32
1516 3069 4.025401 GCGACACGTGGCTTTGGG 62.025 66.667 21.24 4.09 0.00 4.12
1519 3072 3.022287 CTTGCGACACGTGGCTTT 58.978 55.556 21.24 0.00 35.25 3.51
1529 3082 2.666190 TCACAGCCTGCTTGCGAC 60.666 61.111 0.00 0.00 36.02 5.19
1531 3084 2.962827 CTGTCACAGCCTGCTTGCG 61.963 63.158 0.00 0.00 36.02 4.85
1541 3094 2.483106 CTGATGGTTTCAGCTGTCACAG 59.517 50.000 14.67 0.00 45.16 3.66
1542 3095 2.497138 CTGATGGTTTCAGCTGTCACA 58.503 47.619 14.67 9.39 45.16 3.58
1565 3118 0.994247 ATCTGTGTCCAGGAATGCCA 59.006 50.000 0.00 0.00 39.31 4.92
1596 3149 2.886523 CCATTGTTTCTCCACAAGAGCA 59.113 45.455 0.00 0.00 42.90 4.26
1605 3158 1.541588 GTGACTGCCCATTGTTTCTCC 59.458 52.381 0.00 0.00 0.00 3.71
1618 3171 1.912371 GCAAGGTTAGGCGTGACTGC 61.912 60.000 1.16 1.03 0.00 4.40
1619 3172 1.298859 GGCAAGGTTAGGCGTGACTG 61.299 60.000 1.16 0.00 0.00 3.51
1765 3318 1.421268 AGAGGCAACATGTTCAGTGGA 59.579 47.619 8.48 0.00 41.41 4.02
1788 3341 0.251354 GCTCCTGCCTGACATTCTCA 59.749 55.000 0.00 0.00 0.00 3.27
1793 3346 1.624479 CCTGAGCTCCTGCCTGACAT 61.624 60.000 12.15 0.00 40.80 3.06
1859 3412 1.280421 GGATGCCTTTCACTCTCCAGT 59.720 52.381 0.00 0.00 0.00 4.00
1879 3432 6.106673 ACATTAGGATAAGAACGACCTGTTG 58.893 40.000 0.00 0.00 42.09 3.33
1880 3433 6.295719 ACATTAGGATAAGAACGACCTGTT 57.704 37.500 0.00 0.00 45.61 3.16
1968 3526 4.683832 AGTATGCGTCACCTATTGTTCTC 58.316 43.478 0.00 0.00 0.00 2.87
2003 3561 2.158579 TGGAGTGGTTCCCTGTTAAACC 60.159 50.000 0.00 0.00 46.19 3.27
2019 3577 3.406512 AGCCTGAACCTACTATGGAGT 57.593 47.619 0.00 0.00 39.92 3.85
2041 3599 2.677228 CCGGCTGAATGGTTCCCT 59.323 61.111 0.00 0.00 0.00 4.20
2073 3631 7.727634 AGACTGTATGAGATGATAGATGGTTCA 59.272 37.037 0.00 0.00 0.00 3.18
2074 3632 8.121305 AGACTGTATGAGATGATAGATGGTTC 57.879 38.462 0.00 0.00 0.00 3.62
2076 3634 9.593565 TTAAGACTGTATGAGATGATAGATGGT 57.406 33.333 0.00 0.00 0.00 3.55
2092 3650 3.656559 GGTCGCTTGGTTTAAGACTGTA 58.343 45.455 0.00 0.00 38.76 2.74
2101 3659 1.265905 GATGAAACGGTCGCTTGGTTT 59.734 47.619 0.00 0.00 36.65 3.27
2109 3667 4.271590 TGCAAATATGATGAAACGGTCG 57.728 40.909 0.00 0.00 0.00 4.79
2130 3688 2.366837 TCCCACAGGCCATCGGAT 60.367 61.111 5.01 0.00 0.00 4.18
2139 3697 4.020218 TCATTACTCAAGAACTCCCACAGG 60.020 45.833 0.00 0.00 0.00 4.00
2148 3706 4.579869 TGGCTTCCTCATTACTCAAGAAC 58.420 43.478 0.00 0.00 0.00 3.01
2197 3756 2.143925 GACAAGTGTGGAGGCTTACAC 58.856 52.381 21.33 21.33 45.68 2.90
2217 3776 6.998968 AACAAGCTGAATGAGAGGAAATAG 57.001 37.500 0.00 0.00 0.00 1.73
2223 3783 7.615582 TTACATAAACAAGCTGAATGAGAGG 57.384 36.000 0.00 0.00 0.00 3.69
2234 3794 7.649306 CCAAGGAGCATTATTACATAAACAAGC 59.351 37.037 0.00 0.00 0.00 4.01
2251 3811 1.148273 ACGTGAAAGCCAAGGAGCA 59.852 52.632 0.00 0.00 34.23 4.26
2255 3815 0.594796 GCAACACGTGAAAGCCAAGG 60.595 55.000 25.01 1.53 0.00 3.61
2257 3817 1.435515 GGCAACACGTGAAAGCCAA 59.564 52.632 30.80 0.00 44.59 4.52
2268 3828 8.677300 TGATTAAAAGATCATCTTAGGCAACAC 58.323 33.333 0.00 0.00 35.27 3.32
2287 3847 8.087750 AGAGATTTCGCAAATTGGTTGATTAAA 58.912 29.630 0.00 0.00 39.87 1.52
2288 3848 7.601856 AGAGATTTCGCAAATTGGTTGATTAA 58.398 30.769 0.00 0.00 39.87 1.40
2289 3849 7.156876 AGAGATTTCGCAAATTGGTTGATTA 57.843 32.000 0.00 0.00 39.87 1.75
2297 3857 4.202040 TGGCCATAGAGATTTCGCAAATTG 60.202 41.667 0.00 0.00 0.00 2.32
2304 3864 4.271696 TGGTATGGCCATAGAGATTTCG 57.728 45.455 26.09 0.00 43.61 3.46
2339 3899 9.851686 TTGAAGGCATACAGATTTAATAGATGT 57.148 29.630 0.00 0.00 0.00 3.06
2348 3908 6.670695 AAAGGTTTGAAGGCATACAGATTT 57.329 33.333 0.00 0.00 0.00 2.17
2354 3914 6.162777 TGCATAAAAAGGTTTGAAGGCATAC 58.837 36.000 0.00 0.00 0.00 2.39
2358 3918 5.277779 GGTTTGCATAAAAAGGTTTGAAGGC 60.278 40.000 0.00 0.00 0.00 4.35
2359 3919 6.054941 AGGTTTGCATAAAAAGGTTTGAAGG 58.945 36.000 0.00 0.00 0.00 3.46
2360 3920 8.831715 ATAGGTTTGCATAAAAAGGTTTGAAG 57.168 30.769 0.00 0.00 0.00 3.02
2362 3922 8.207545 ACAATAGGTTTGCATAAAAAGGTTTGA 58.792 29.630 0.00 0.00 0.00 2.69
2368 3928 9.691362 ACTGTAACAATAGGTTTGCATAAAAAG 57.309 29.630 0.00 0.00 40.96 2.27
2373 3933 7.051623 CCCTACTGTAACAATAGGTTTGCATA 58.948 38.462 5.73 0.00 40.96 3.14
2375 3935 5.013287 TCCCTACTGTAACAATAGGTTTGCA 59.987 40.000 5.73 0.00 40.96 4.08
2376 3936 5.493809 TCCCTACTGTAACAATAGGTTTGC 58.506 41.667 5.73 0.00 40.96 3.68
2377 3937 7.166167 ACTTCCCTACTGTAACAATAGGTTTG 58.834 38.462 5.73 0.00 40.96 2.93
2378 3938 7.325725 ACTTCCCTACTGTAACAATAGGTTT 57.674 36.000 5.73 0.00 40.96 3.27
2379 3939 6.947376 ACTTCCCTACTGTAACAATAGGTT 57.053 37.500 5.73 0.00 43.62 3.50
2380 3940 6.947376 AACTTCCCTACTGTAACAATAGGT 57.053 37.500 5.73 0.00 34.72 3.08
2381 3941 7.361799 GCAAAACTTCCCTACTGTAACAATAGG 60.362 40.741 0.00 0.00 36.07 2.57
2382 3942 7.390718 AGCAAAACTTCCCTACTGTAACAATAG 59.609 37.037 0.00 0.00 0.00 1.73
2383 3943 7.228590 AGCAAAACTTCCCTACTGTAACAATA 58.771 34.615 0.00 0.00 0.00 1.90
2397 3957 6.843069 TTTCTAATGCAAAGCAAAACTTCC 57.157 33.333 0.00 0.00 43.62 3.46
2401 3961 7.651704 TCCTAGTTTTCTAATGCAAAGCAAAAC 59.348 33.333 19.05 19.05 43.62 2.43
2406 3966 5.335935 GCTCCTAGTTTTCTAATGCAAAGC 58.664 41.667 0.00 0.00 31.45 3.51
2422 3983 1.605710 CAATTTCCCATGCGCTCCTAG 59.394 52.381 9.73 0.00 0.00 3.02
2424 3985 0.323725 ACAATTTCCCATGCGCTCCT 60.324 50.000 9.73 0.00 0.00 3.69
2425 3986 0.532115 AACAATTTCCCATGCGCTCC 59.468 50.000 9.73 0.00 0.00 4.70
2429 3990 6.795399 AGAGTTAATAACAATTTCCCATGCG 58.205 36.000 5.89 0.00 0.00 4.73
2430 3991 9.087424 GAAAGAGTTAATAACAATTTCCCATGC 57.913 33.333 15.95 0.00 34.61 4.06
2445 4006 9.454859 CTTGGATGAAGTTAGGAAAGAGTTAAT 57.545 33.333 0.00 0.00 0.00 1.40
2468 4802 4.274459 GCAGATAACTACTTCCATGGCTTG 59.726 45.833 6.96 1.69 0.00 4.01
2469 4803 4.080356 TGCAGATAACTACTTCCATGGCTT 60.080 41.667 6.96 0.00 0.00 4.35
2471 4805 3.808728 TGCAGATAACTACTTCCATGGC 58.191 45.455 6.96 0.00 0.00 4.40
2477 4811 7.219535 CACATTTTGCATGCAGATAACTACTTC 59.780 37.037 21.50 0.00 0.00 3.01
2484 4818 6.324042 CAGTACACATTTTGCATGCAGATAA 58.676 36.000 21.50 16.14 0.00 1.75
2486 4820 4.381185 CCAGTACACATTTTGCATGCAGAT 60.381 41.667 21.50 15.80 0.00 2.90
2490 4824 2.609350 CCCAGTACACATTTTGCATGC 58.391 47.619 11.82 11.82 0.00 4.06
2491 4825 2.231964 AGCCCAGTACACATTTTGCATG 59.768 45.455 0.00 0.00 0.00 4.06
2492 4826 2.528564 AGCCCAGTACACATTTTGCAT 58.471 42.857 0.00 0.00 0.00 3.96
2498 4834 4.473559 ACCTACAATAGCCCAGTACACATT 59.526 41.667 0.00 0.00 0.00 2.71
2499 4835 4.037927 ACCTACAATAGCCCAGTACACAT 58.962 43.478 0.00 0.00 0.00 3.21
2511 4847 7.410087 CGTGTTCGTTCTTTGTACCTACAATAG 60.410 40.741 0.00 1.41 44.72 1.73
2512 4848 6.363088 CGTGTTCGTTCTTTGTACCTACAATA 59.637 38.462 0.00 0.00 44.72 1.90
2513 4849 5.176223 CGTGTTCGTTCTTTGTACCTACAAT 59.824 40.000 0.00 0.00 44.72 2.71
2514 4850 4.503734 CGTGTTCGTTCTTTGTACCTACAA 59.496 41.667 0.00 0.00 43.80 2.41
2516 4852 3.426525 CCGTGTTCGTTCTTTGTACCTAC 59.573 47.826 0.00 0.00 35.01 3.18
2517 4853 3.552684 CCCGTGTTCGTTCTTTGTACCTA 60.553 47.826 0.00 0.00 35.01 3.08
2518 4854 2.476821 CCGTGTTCGTTCTTTGTACCT 58.523 47.619 0.00 0.00 35.01 3.08
2519 4855 1.528161 CCCGTGTTCGTTCTTTGTACC 59.472 52.381 0.00 0.00 35.01 3.34
2521 4857 2.600470 ACCCGTGTTCGTTCTTTGTA 57.400 45.000 0.00 0.00 35.01 2.41
2522 4858 1.741528 AACCCGTGTTCGTTCTTTGT 58.258 45.000 0.00 0.00 35.01 2.83
2523 4859 2.159490 ACAAACCCGTGTTCGTTCTTTG 60.159 45.455 0.00 0.00 32.15 2.77
2524 4860 2.086094 ACAAACCCGTGTTCGTTCTTT 58.914 42.857 0.00 0.00 32.15 2.52
2526 4862 1.741528 AACAAACCCGTGTTCGTTCT 58.258 45.000 0.00 0.00 37.10 3.01
2527 4863 2.609002 AGTAACAAACCCGTGTTCGTTC 59.391 45.455 0.00 0.00 40.85 3.95
2528 4864 2.631267 AGTAACAAACCCGTGTTCGTT 58.369 42.857 0.00 0.00 40.85 3.85
2530 4866 3.383761 ACTAGTAACAAACCCGTGTTCG 58.616 45.455 0.00 0.00 40.85 3.95
2532 4868 6.160576 TCTAACTAGTAACAAACCCGTGTT 57.839 37.500 0.00 0.00 43.95 3.32
2533 4869 5.302823 ACTCTAACTAGTAACAAACCCGTGT 59.697 40.000 0.00 0.00 0.00 4.49
2534 4870 5.776744 ACTCTAACTAGTAACAAACCCGTG 58.223 41.667 0.00 0.00 0.00 4.94
2536 4872 5.866092 GGAACTCTAACTAGTAACAAACCCG 59.134 44.000 0.00 0.00 0.00 5.28
2537 4873 7.002250 AGGAACTCTAACTAGTAACAAACCC 57.998 40.000 0.00 0.00 0.00 4.11
2538 4874 8.249638 CCTAGGAACTCTAACTAGTAACAAACC 58.750 40.741 1.05 0.00 41.75 3.27
2539 4875 8.249638 CCCTAGGAACTCTAACTAGTAACAAAC 58.750 40.741 11.48 0.00 41.75 2.93
2544 4880 8.003629 GGAATCCCTAGGAACTCTAACTAGTAA 58.996 40.741 11.48 0.00 41.75 2.24
2548 4884 6.374588 CAGGAATCCCTAGGAACTCTAACTA 58.625 44.000 11.48 0.00 42.02 2.24
2549 4885 5.212745 CAGGAATCCCTAGGAACTCTAACT 58.787 45.833 11.48 0.00 42.02 2.24
2550 4886 4.202274 GCAGGAATCCCTAGGAACTCTAAC 60.202 50.000 11.48 0.00 42.02 2.34
2551 4887 3.967987 GCAGGAATCCCTAGGAACTCTAA 59.032 47.826 11.48 0.00 42.02 2.10
2552 4888 3.577919 GCAGGAATCCCTAGGAACTCTA 58.422 50.000 11.48 0.00 42.02 2.43
2553 4889 2.403561 GCAGGAATCCCTAGGAACTCT 58.596 52.381 11.48 0.00 42.02 3.24
2554 4890 1.418264 GGCAGGAATCCCTAGGAACTC 59.582 57.143 11.48 2.80 42.02 3.01
2555 4891 1.512735 GGCAGGAATCCCTAGGAACT 58.487 55.000 11.48 0.00 42.02 3.01
2556 4892 0.106894 CGGCAGGAATCCCTAGGAAC 59.893 60.000 11.48 0.00 42.02 3.62
2559 4911 1.276421 CATACGGCAGGAATCCCTAGG 59.724 57.143 0.06 0.06 42.02 3.02
2563 4915 4.065110 GCATACGGCAGGAATCCC 57.935 61.111 0.00 0.00 43.97 3.85
2596 4950 6.914215 CGCATAGCATTACACAAATCAAGATT 59.086 34.615 0.00 0.00 0.00 2.40
2597 4951 6.038603 ACGCATAGCATTACACAAATCAAGAT 59.961 34.615 0.00 0.00 0.00 2.40
2609 4963 1.070577 CGGCTTCACGCATAGCATTAC 60.071 52.381 5.74 0.00 41.67 1.89
2610 4964 1.217001 CGGCTTCACGCATAGCATTA 58.783 50.000 5.74 0.00 41.67 1.90
2611 4965 2.016961 CGGCTTCACGCATAGCATT 58.983 52.632 5.74 0.00 41.67 3.56
2620 5068 0.165944 CTTTACTTGGCGGCTTCACG 59.834 55.000 11.43 0.00 0.00 4.35
2623 5071 3.687698 TCATAACTTTACTTGGCGGCTTC 59.312 43.478 11.43 0.00 0.00 3.86
2626 5074 3.687698 TCTTCATAACTTTACTTGGCGGC 59.312 43.478 0.00 0.00 0.00 6.53
2628 5076 6.292168 CCGTATCTTCATAACTTTACTTGGCG 60.292 42.308 0.00 0.00 0.00 5.69
2638 5086 8.450964 CAAATTGTCAACCGTATCTTCATAACT 58.549 33.333 0.00 0.00 0.00 2.24
2639 5087 8.447833 TCAAATTGTCAACCGTATCTTCATAAC 58.552 33.333 0.00 0.00 0.00 1.89
2640 5088 8.554835 TCAAATTGTCAACCGTATCTTCATAA 57.445 30.769 0.00 0.00 0.00 1.90
2641 5089 8.731275 ATCAAATTGTCAACCGTATCTTCATA 57.269 30.769 0.00 0.00 0.00 2.15
2643 5091 8.611757 CATATCAAATTGTCAACCGTATCTTCA 58.388 33.333 0.00 0.00 0.00 3.02
2644 5092 7.587757 GCATATCAAATTGTCAACCGTATCTTC 59.412 37.037 0.00 0.00 0.00 2.87
2645 5093 7.283127 AGCATATCAAATTGTCAACCGTATCTT 59.717 33.333 0.00 0.00 0.00 2.40
2673 5121 3.569194 TGGACTACAGCTTGGTCAAAA 57.431 42.857 12.10 0.00 0.00 2.44
2674 5122 3.181445 ACATGGACTACAGCTTGGTCAAA 60.181 43.478 12.10 3.57 0.00 2.69
2676 5124 1.977854 ACATGGACTACAGCTTGGTCA 59.022 47.619 12.10 2.83 0.00 4.02
2677 5125 2.770164 ACATGGACTACAGCTTGGTC 57.230 50.000 0.00 0.00 0.00 4.02
2679 5127 4.333649 CACATTACATGGACTACAGCTTGG 59.666 45.833 0.00 0.00 33.60 3.61
2680 5128 5.178061 TCACATTACATGGACTACAGCTTG 58.822 41.667 0.00 0.00 33.60 4.01
2681 5129 5.420725 TCACATTACATGGACTACAGCTT 57.579 39.130 0.00 0.00 33.60 3.74
2683 5131 4.332819 GGTTCACATTACATGGACTACAGC 59.667 45.833 0.00 0.00 33.60 4.40
2684 5132 5.487433 TGGTTCACATTACATGGACTACAG 58.513 41.667 0.00 0.00 33.60 2.74
2686 5134 8.500753 TTTATGGTTCACATTACATGGACTAC 57.499 34.615 0.00 0.00 41.03 2.73
2687 5135 9.693739 AATTTATGGTTCACATTACATGGACTA 57.306 29.630 0.00 0.00 41.03 2.59
2689 5137 9.086336 CAAATTTATGGTTCACATTACATGGAC 57.914 33.333 0.00 0.00 41.03 4.02
2690 5138 9.029368 TCAAATTTATGGTTCACATTACATGGA 57.971 29.630 0.00 0.00 41.03 3.41
2691 5139 9.820725 ATCAAATTTATGGTTCACATTACATGG 57.179 29.630 0.00 0.00 41.03 3.66
2725 5194 7.120726 ACACAAAAACTATCCTTGCAGGTATAC 59.879 37.037 0.00 0.00 36.53 1.47
2726 5195 7.172342 ACACAAAAACTATCCTTGCAGGTATA 58.828 34.615 0.00 0.00 36.53 1.47
2730 5199 4.853924 ACACAAAAACTATCCTTGCAGG 57.146 40.909 0.00 0.00 36.46 4.85
2735 5204 8.519799 TCTCAGAAAACACAAAAACTATCCTT 57.480 30.769 0.00 0.00 0.00 3.36
2767 5236 9.740239 GGCATGCCAGTCATAATAAATATATTG 57.260 33.333 32.08 0.00 33.36 1.90
2768 5237 9.705103 AGGCATGCCAGTCATAATAAATATATT 57.295 29.630 37.18 7.74 38.92 1.28
2770 5239 9.532494 AAAGGCATGCCAGTCATAATAAATATA 57.468 29.630 37.18 0.00 38.92 0.86
2771 5240 8.426569 AAAGGCATGCCAGTCATAATAAATAT 57.573 30.769 37.18 8.89 38.92 1.28
2774 5243 6.406849 GGAAAAGGCATGCCAGTCATAATAAA 60.407 38.462 37.18 0.00 38.92 1.40
2800 5338 7.160726 CCTTCTTGCAATTCCCTGAATAAAAA 58.839 34.615 0.00 0.00 31.46 1.94
2803 5341 4.160252 GCCTTCTTGCAATTCCCTGAATAA 59.840 41.667 0.00 0.00 31.46 1.40
2805 5343 2.498885 GCCTTCTTGCAATTCCCTGAAT 59.501 45.455 0.00 0.00 33.25 2.57
2807 5345 1.076024 AGCCTTCTTGCAATTCCCTGA 59.924 47.619 0.00 0.00 0.00 3.86
2854 5392 1.013755 CGCATCTTACGTTTCCGCG 60.014 57.895 0.00 0.00 37.70 6.46
2864 5402 6.318900 TCTTGAGATCTGAGTAACGCATCTTA 59.681 38.462 0.00 0.00 0.00 2.10
2865 5403 4.991153 TGAGATCTGAGTAACGCATCTT 57.009 40.909 0.00 0.00 0.00 2.40
2868 5406 4.991153 TCTTGAGATCTGAGTAACGCAT 57.009 40.909 0.00 0.00 0.00 4.73
2870 5408 4.987832 TCTTCTTGAGATCTGAGTAACGC 58.012 43.478 0.00 0.00 0.00 4.84
2883 5421 1.068434 GCCCCTCTCGATCTTCTTGAG 59.932 57.143 0.00 0.00 36.79 3.02
2887 5425 0.684805 AACGCCCCTCTCGATCTTCT 60.685 55.000 0.00 0.00 0.00 2.85
2900 5438 3.683587 GAAATGCCTGCGAACGCCC 62.684 63.158 16.27 5.82 41.09 6.13
2921 5459 5.607939 AGACAACCACGGTTATATCATCA 57.392 39.130 0.05 0.00 36.46 3.07
2954 5492 1.764723 TCTGTCACTGATAGGCCATGG 59.235 52.381 7.63 7.63 0.00 3.66
2968 5506 5.702670 GGACTTTCTTGTGAATGATCTGTCA 59.297 40.000 0.00 0.00 39.04 3.58
2971 5509 4.093998 CCGGACTTTCTTGTGAATGATCTG 59.906 45.833 0.00 0.00 33.29 2.90
2979 5517 1.420430 AGGACCGGACTTTCTTGTGA 58.580 50.000 9.46 0.00 0.00 3.58
2990 5528 2.262637 ACACTAATGGAAAGGACCGGA 58.737 47.619 9.46 0.00 0.00 5.14
2992 5530 3.197116 AGGTACACTAATGGAAAGGACCG 59.803 47.826 0.00 0.00 0.00 4.79
2995 5533 5.080969 CGAAGGTACACTAATGGAAAGGA 57.919 43.478 0.00 0.00 0.00 3.36
3036 5574 3.803778 CAGTAAAACCAACGTTACGACCT 59.196 43.478 13.03 0.00 35.73 3.85
3039 5577 3.001127 GCACAGTAAAACCAACGTTACGA 59.999 43.478 13.03 0.00 35.73 3.43
3046 5584 2.034179 GGGTGAGCACAGTAAAACCAAC 59.966 50.000 2.75 0.00 0.00 3.77
3064 5602 3.007506 TCATCACACATAGTTTGACGGGT 59.992 43.478 0.00 0.00 0.00 5.28
3071 5609 9.671279 TGAATCAGTAATCATCACACATAGTTT 57.329 29.630 0.00 0.00 0.00 2.66
3079 5617 7.984422 AAGTTGTGAATCAGTAATCATCACA 57.016 32.000 3.01 3.01 46.12 3.58
3080 5618 8.506437 TCAAAGTTGTGAATCAGTAATCATCAC 58.494 33.333 0.00 0.00 40.53 3.06
3081 5619 8.620116 TCAAAGTTGTGAATCAGTAATCATCA 57.380 30.769 0.00 0.00 0.00 3.07
3082 5620 9.499585 CATCAAAGTTGTGAATCAGTAATCATC 57.500 33.333 0.00 0.00 0.00 2.92
3083 5621 7.972277 GCATCAAAGTTGTGAATCAGTAATCAT 59.028 33.333 0.00 0.00 0.00 2.45
3085 5623 7.484007 CAGCATCAAAGTTGTGAATCAGTAATC 59.516 37.037 0.00 0.00 0.00 1.75
3086 5624 7.310664 CAGCATCAAAGTTGTGAATCAGTAAT 58.689 34.615 0.00 0.00 0.00 1.89
3087 5625 6.671190 CAGCATCAAAGTTGTGAATCAGTAA 58.329 36.000 0.00 0.00 0.00 2.24
3088 5626 5.335113 GCAGCATCAAAGTTGTGAATCAGTA 60.335 40.000 0.00 0.00 0.00 2.74
3089 5627 4.558095 GCAGCATCAAAGTTGTGAATCAGT 60.558 41.667 0.00 0.00 0.00 3.41
3090 5628 3.918591 GCAGCATCAAAGTTGTGAATCAG 59.081 43.478 0.00 0.00 0.00 2.90
3091 5629 3.570975 AGCAGCATCAAAGTTGTGAATCA 59.429 39.130 0.00 0.00 0.00 2.57
3092 5630 3.918591 CAGCAGCATCAAAGTTGTGAATC 59.081 43.478 0.00 0.00 0.00 2.52
3093 5631 3.319972 ACAGCAGCATCAAAGTTGTGAAT 59.680 39.130 0.00 0.00 0.00 2.57
3094 5632 2.689471 ACAGCAGCATCAAAGTTGTGAA 59.311 40.909 0.00 0.00 0.00 3.18
3099 5638 1.268899 GAGCACAGCAGCATCAAAGTT 59.731 47.619 0.00 0.00 36.85 2.66
3132 5671 5.046014 GCTGGGATTAGACATCATCCTACAT 60.046 44.000 0.00 0.00 39.30 2.29
3137 5676 2.641815 AGGCTGGGATTAGACATCATCC 59.358 50.000 0.00 0.00 38.68 3.51
3138 5677 4.070716 CAAGGCTGGGATTAGACATCATC 58.929 47.826 0.00 0.00 0.00 2.92
3139 5678 3.718434 TCAAGGCTGGGATTAGACATCAT 59.282 43.478 0.00 0.00 0.00 2.45
3140 5679 3.114606 TCAAGGCTGGGATTAGACATCA 58.885 45.455 0.00 0.00 0.00 3.07
3141 5680 3.845781 TCAAGGCTGGGATTAGACATC 57.154 47.619 0.00 0.00 0.00 3.06
3142 5681 4.591321 TTTCAAGGCTGGGATTAGACAT 57.409 40.909 0.00 0.00 0.00 3.06
3143 5682 4.079253 GTTTTCAAGGCTGGGATTAGACA 58.921 43.478 0.00 0.00 0.00 3.41
3144 5683 3.444034 GGTTTTCAAGGCTGGGATTAGAC 59.556 47.826 0.00 0.00 0.00 2.59
3145 5684 3.333680 AGGTTTTCAAGGCTGGGATTAGA 59.666 43.478 0.00 0.00 0.00 2.10
3146 5685 3.696548 GAGGTTTTCAAGGCTGGGATTAG 59.303 47.826 0.00 0.00 0.00 1.73
3147 5686 3.333680 AGAGGTTTTCAAGGCTGGGATTA 59.666 43.478 0.00 0.00 0.00 1.75
3148 5687 2.110721 AGAGGTTTTCAAGGCTGGGATT 59.889 45.455 0.00 0.00 0.00 3.01
3149 5688 1.713078 AGAGGTTTTCAAGGCTGGGAT 59.287 47.619 0.00 0.00 0.00 3.85
3150 5689 1.149101 AGAGGTTTTCAAGGCTGGGA 58.851 50.000 0.00 0.00 0.00 4.37
3151 5690 2.001076 AAGAGGTTTTCAAGGCTGGG 57.999 50.000 0.00 0.00 0.00 4.45
3152 5691 3.225940 AGAAAGAGGTTTTCAAGGCTGG 58.774 45.455 0.00 0.00 0.00 4.85
3153 5692 3.254411 GGAGAAAGAGGTTTTCAAGGCTG 59.746 47.826 0.00 0.00 0.00 4.85
3154 5693 3.491342 GGAGAAAGAGGTTTTCAAGGCT 58.509 45.455 2.88 0.00 0.00 4.58
3155 5694 2.226674 CGGAGAAAGAGGTTTTCAAGGC 59.773 50.000 2.88 0.00 0.00 4.35
3156 5695 3.740115 TCGGAGAAAGAGGTTTTCAAGG 58.260 45.455 2.88 0.00 0.00 3.61
3157 5696 5.057149 TCTTCGGAGAAAGAGGTTTTCAAG 58.943 41.667 0.00 0.00 45.90 3.02
3158 5697 5.031066 TCTTCGGAGAAAGAGGTTTTCAA 57.969 39.130 0.00 0.00 45.90 2.69
3159 5698 4.682778 TCTTCGGAGAAAGAGGTTTTCA 57.317 40.909 0.00 0.00 45.90 2.69
3160 5699 5.470437 ACATTCTTCGGAGAAAGAGGTTTTC 59.530 40.000 15.39 0.00 44.61 2.29
3161 5700 5.239525 CACATTCTTCGGAGAAAGAGGTTTT 59.760 40.000 15.39 0.00 44.61 2.43
3162 5701 4.757149 CACATTCTTCGGAGAAAGAGGTTT 59.243 41.667 15.39 0.00 44.61 3.27
3163 5702 4.319177 CACATTCTTCGGAGAAAGAGGTT 58.681 43.478 15.39 0.00 44.61 3.50
3164 5703 3.307059 CCACATTCTTCGGAGAAAGAGGT 60.307 47.826 15.39 6.64 44.61 3.85
3165 5704 3.265791 CCACATTCTTCGGAGAAAGAGG 58.734 50.000 15.39 12.66 44.61 3.69
3166 5705 2.675348 GCCACATTCTTCGGAGAAAGAG 59.325 50.000 15.39 7.37 44.61 2.85
3167 5706 2.303022 AGCCACATTCTTCGGAGAAAGA 59.697 45.455 15.39 0.00 44.61 2.52
3168 5707 2.704572 AGCCACATTCTTCGGAGAAAG 58.295 47.619 10.91 8.87 44.61 2.62
3169 5708 2.859165 AGCCACATTCTTCGGAGAAA 57.141 45.000 10.91 0.00 44.61 2.52
3170 5709 2.859165 AAGCCACATTCTTCGGAGAA 57.141 45.000 9.01 9.01 45.90 2.87
3171 5710 2.859165 AAAGCCACATTCTTCGGAGA 57.141 45.000 0.00 0.00 0.00 3.71
3172 5711 3.751175 TGTTAAAGCCACATTCTTCGGAG 59.249 43.478 0.00 0.00 0.00 4.63
3173 5712 3.500680 GTGTTAAAGCCACATTCTTCGGA 59.499 43.478 0.00 0.00 33.00 4.55
3174 5713 3.252215 TGTGTTAAAGCCACATTCTTCGG 59.748 43.478 0.00 0.00 37.88 4.30
3175 5714 4.481930 TGTGTTAAAGCCACATTCTTCG 57.518 40.909 0.00 0.00 37.88 3.79
3200 5739 2.033299 CCAGCGTTCTGCAGAAGAAAAA 59.967 45.455 29.13 4.17 46.51 1.94
3201 5740 1.603802 CCAGCGTTCTGCAGAAGAAAA 59.396 47.619 29.13 5.00 46.51 2.29
3202 5741 1.229428 CCAGCGTTCTGCAGAAGAAA 58.771 50.000 29.13 5.44 46.51 2.52
3210 5749 1.432270 GACATAGCCCAGCGTTCTGC 61.432 60.000 0.00 0.00 46.98 4.26
3211 5750 1.148157 CGACATAGCCCAGCGTTCTG 61.148 60.000 0.00 0.00 40.02 3.02
3212 5751 1.141881 CGACATAGCCCAGCGTTCT 59.858 57.895 0.00 0.00 0.00 3.01
3213 5752 0.739813 AACGACATAGCCCAGCGTTC 60.740 55.000 0.00 0.00 40.68 3.95
3214 5753 1.019278 CAACGACATAGCCCAGCGTT 61.019 55.000 0.00 0.00 44.80 4.84
3215 5754 1.447838 CAACGACATAGCCCAGCGT 60.448 57.895 0.00 0.00 36.68 5.07
3216 5755 2.173669 CCAACGACATAGCCCAGCG 61.174 63.158 0.00 0.00 0.00 5.18
3217 5756 0.177141 TACCAACGACATAGCCCAGC 59.823 55.000 0.00 0.00 0.00 4.85
3218 5757 1.480954 AGTACCAACGACATAGCCCAG 59.519 52.381 0.00 0.00 0.00 4.45
3219 5758 1.206132 CAGTACCAACGACATAGCCCA 59.794 52.381 0.00 0.00 0.00 5.36
3220 5759 1.935933 CAGTACCAACGACATAGCCC 58.064 55.000 0.00 0.00 0.00 5.19
3221 5760 1.287425 GCAGTACCAACGACATAGCC 58.713 55.000 0.00 0.00 0.00 3.93
3222 5761 0.921347 CGCAGTACCAACGACATAGC 59.079 55.000 0.00 0.00 0.00 2.97
3223 5762 2.554806 TCGCAGTACCAACGACATAG 57.445 50.000 0.00 0.00 0.00 2.23
3224 5763 2.164827 ACATCGCAGTACCAACGACATA 59.835 45.455 4.81 0.00 38.85 2.29
3225 5764 1.067142 ACATCGCAGTACCAACGACAT 60.067 47.619 4.81 0.00 38.85 3.06
3226 5765 0.315886 ACATCGCAGTACCAACGACA 59.684 50.000 4.81 0.00 38.85 4.35
3227 5766 0.713883 CACATCGCAGTACCAACGAC 59.286 55.000 4.81 0.00 38.85 4.34
3228 5767 0.315886 ACACATCGCAGTACCAACGA 59.684 50.000 5.14 5.14 40.53 3.85
3229 5768 0.438445 CACACATCGCAGTACCAACG 59.562 55.000 0.00 0.00 0.00 4.10
3230 5769 1.459592 GACACACATCGCAGTACCAAC 59.540 52.381 0.00 0.00 0.00 3.77
3231 5770 1.790755 GACACACATCGCAGTACCAA 58.209 50.000 0.00 0.00 0.00 3.67
3232 5771 0.388006 CGACACACATCGCAGTACCA 60.388 55.000 0.00 0.00 34.90 3.25
3233 5772 2.359792 CGACACACATCGCAGTACC 58.640 57.895 0.00 0.00 34.90 3.34
3240 5779 1.131218 CAAGCAGCGACACACATCG 59.869 57.895 0.00 0.00 45.09 3.84
3241 5780 0.588252 AACAAGCAGCGACACACATC 59.412 50.000 0.00 0.00 0.00 3.06
3242 5781 0.588252 GAACAAGCAGCGACACACAT 59.412 50.000 0.00 0.00 0.00 3.21
3243 5782 0.461870 AGAACAAGCAGCGACACACA 60.462 50.000 0.00 0.00 0.00 3.72
3244 5783 0.041839 CAGAACAAGCAGCGACACAC 60.042 55.000 0.00 0.00 0.00 3.82
3245 5784 0.179086 TCAGAACAAGCAGCGACACA 60.179 50.000 0.00 0.00 0.00 3.72
3246 5785 0.937304 TTCAGAACAAGCAGCGACAC 59.063 50.000 0.00 0.00 0.00 3.67
3247 5786 0.937304 GTTCAGAACAAGCAGCGACA 59.063 50.000 8.54 0.00 0.00 4.35
3248 5787 1.221414 AGTTCAGAACAAGCAGCGAC 58.779 50.000 15.85 0.00 0.00 5.19
3249 5788 2.035961 ACTAGTTCAGAACAAGCAGCGA 59.964 45.455 15.85 0.00 0.00 4.93
3250 5789 2.408050 ACTAGTTCAGAACAAGCAGCG 58.592 47.619 15.85 0.00 0.00 5.18
3251 5790 4.561105 AGTACTAGTTCAGAACAAGCAGC 58.439 43.478 15.85 1.58 0.00 5.25
3252 5791 5.107298 GCAAGTACTAGTTCAGAACAAGCAG 60.107 44.000 15.85 8.88 0.00 4.24
3253 5792 4.750098 GCAAGTACTAGTTCAGAACAAGCA 59.250 41.667 15.85 0.00 0.00 3.91
3254 5793 4.143305 CGCAAGTACTAGTTCAGAACAAGC 60.143 45.833 15.85 0.32 0.00 4.01
3255 5794 5.502214 CGCAAGTACTAGTTCAGAACAAG 57.498 43.478 15.85 0.00 0.00 3.16
3290 5829 5.300752 AGAATGATCAAGAACAAGTCGTGT 58.699 37.500 0.00 0.00 44.64 4.49
3291 5830 5.852738 AGAATGATCAAGAACAAGTCGTG 57.147 39.130 0.00 0.00 37.10 4.35
3292 5831 6.089551 CGTAAGAATGATCAAGAACAAGTCGT 59.910 38.462 0.00 0.00 43.02 4.34
3293 5832 6.089551 ACGTAAGAATGATCAAGAACAAGTCG 59.910 38.462 0.00 0.16 43.62 4.18
3294 5833 7.095607 ACACGTAAGAATGATCAAGAACAAGTC 60.096 37.037 0.00 0.00 43.62 3.01
3295 5834 6.706270 ACACGTAAGAATGATCAAGAACAAGT 59.294 34.615 0.00 0.00 43.62 3.16
3296 5835 7.011773 CACACGTAAGAATGATCAAGAACAAG 58.988 38.462 0.00 0.00 43.62 3.16
3297 5836 6.481976 ACACACGTAAGAATGATCAAGAACAA 59.518 34.615 0.00 0.00 43.62 2.83
3298 5837 5.989168 ACACACGTAAGAATGATCAAGAACA 59.011 36.000 0.00 0.00 43.62 3.18
3299 5838 6.467723 ACACACGTAAGAATGATCAAGAAC 57.532 37.500 0.00 0.00 43.62 3.01
3300 5839 8.771920 ATTACACACGTAAGAATGATCAAGAA 57.228 30.769 0.00 0.00 40.85 2.52
3301 5840 7.491372 GGATTACACACGTAAGAATGATCAAGA 59.509 37.037 0.00 0.00 40.85 3.02
3302 5841 7.277760 TGGATTACACACGTAAGAATGATCAAG 59.722 37.037 0.00 0.00 40.85 3.02
3303 5842 7.100409 TGGATTACACACGTAAGAATGATCAA 58.900 34.615 0.00 0.00 40.85 2.57
3304 5843 6.635755 TGGATTACACACGTAAGAATGATCA 58.364 36.000 0.00 0.00 40.85 2.92
3305 5844 6.757010 ACTGGATTACACACGTAAGAATGATC 59.243 38.462 0.00 0.00 40.85 2.92
3306 5845 6.640518 ACTGGATTACACACGTAAGAATGAT 58.359 36.000 0.00 0.00 40.85 2.45
3307 5846 6.032956 ACTGGATTACACACGTAAGAATGA 57.967 37.500 0.00 0.00 40.85 2.57
3308 5847 6.721571 AACTGGATTACACACGTAAGAATG 57.278 37.500 0.00 0.00 40.85 2.67
3309 5848 7.062605 CGTTAACTGGATTACACACGTAAGAAT 59.937 37.037 3.71 0.00 40.85 2.40
3310 5849 6.363088 CGTTAACTGGATTACACACGTAAGAA 59.637 38.462 3.71 0.00 40.85 2.52
3311 5850 5.858049 CGTTAACTGGATTACACACGTAAGA 59.142 40.000 3.71 0.00 40.85 2.10
3312 5851 5.061311 CCGTTAACTGGATTACACACGTAAG 59.939 44.000 9.94 0.00 40.85 2.34
3313 5852 4.922692 CCGTTAACTGGATTACACACGTAA 59.077 41.667 9.94 0.00 41.73 3.18
3314 5853 4.484236 CCGTTAACTGGATTACACACGTA 58.516 43.478 9.94 0.00 0.00 3.57
3315 5854 3.319755 CCGTTAACTGGATTACACACGT 58.680 45.455 9.94 0.00 0.00 4.49
3316 5855 2.093152 GCCGTTAACTGGATTACACACG 59.907 50.000 17.17 0.00 0.00 4.49
3317 5856 2.417586 GGCCGTTAACTGGATTACACAC 59.582 50.000 17.17 1.22 0.00 3.82
3318 5857 2.038689 TGGCCGTTAACTGGATTACACA 59.961 45.455 17.17 5.87 0.00 3.72
3319 5858 2.702261 TGGCCGTTAACTGGATTACAC 58.298 47.619 17.17 2.33 0.00 2.90
3320 5859 3.420300 TTGGCCGTTAACTGGATTACA 57.580 42.857 17.17 8.94 0.00 2.41
3321 5860 4.495184 CGAATTGGCCGTTAACTGGATTAC 60.495 45.833 17.17 7.09 0.00 1.89
3322 5861 3.623960 CGAATTGGCCGTTAACTGGATTA 59.376 43.478 17.17 4.75 0.00 1.75
3323 5862 2.422127 CGAATTGGCCGTTAACTGGATT 59.578 45.455 17.17 9.76 0.00 3.01
3324 5863 2.014128 CGAATTGGCCGTTAACTGGAT 58.986 47.619 17.17 3.15 0.00 3.41
3325 5864 1.002201 TCGAATTGGCCGTTAACTGGA 59.998 47.619 17.17 1.22 0.00 3.86
3326 5865 1.444836 TCGAATTGGCCGTTAACTGG 58.555 50.000 3.71 7.95 0.00 4.00
3327 5866 3.488489 CTTTCGAATTGGCCGTTAACTG 58.512 45.455 0.00 0.00 0.00 3.16
3328 5867 2.486592 CCTTTCGAATTGGCCGTTAACT 59.513 45.455 0.00 0.00 0.00 2.24
3329 5868 2.414957 CCCTTTCGAATTGGCCGTTAAC 60.415 50.000 0.00 0.00 0.00 2.01
3330 5869 1.813786 CCCTTTCGAATTGGCCGTTAA 59.186 47.619 0.00 0.00 0.00 2.01
3331 5870 1.455248 CCCTTTCGAATTGGCCGTTA 58.545 50.000 0.00 0.00 0.00 3.18
3373 5912 1.029681 GGCGAAGACCACCTTTTGTT 58.970 50.000 0.00 0.00 34.68 2.83
3399 5938 2.887568 GCGTCATCACCAGAGCCG 60.888 66.667 0.00 0.00 0.00 5.52
3442 5981 2.741145 AGACTAGAAGGACGGCAAGAT 58.259 47.619 0.00 0.00 0.00 2.40
3458 5997 0.249911 GGTGCAACGAGACCAAGACT 60.250 55.000 0.00 0.00 38.12 3.24
3517 6056 2.124151 CTAAGGGGGCAAGCGCAT 60.124 61.111 11.47 0.00 41.24 4.73
3540 6079 1.335051 GCAGCGTCCTTGTTTCCTTTC 60.335 52.381 0.00 0.00 0.00 2.62
3542 6081 1.507141 CGCAGCGTCCTTGTTTCCTT 61.507 55.000 6.65 0.00 0.00 3.36
3744 6283 0.527817 GTCTGTACGGCCCATCTTCG 60.528 60.000 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.