Multiple sequence alignment - TraesCS5A01G478300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G478300 chr5A 100.000 1898 0 0 1 1898 651757950 651759847 0.000000e+00 3506
1 TraesCS5A01G478300 chr5A 100.000 327 0 0 2172 2498 651760121 651760447 2.750000e-169 604
2 TraesCS5A01G478300 chr5A 83.750 560 53 14 965 1498 651734258 651734805 1.730000e-136 496
3 TraesCS5A01G478300 chr5A 82.430 535 55 17 1001 1499 651579340 651578809 4.940000e-117 431
4 TraesCS5A01G478300 chr5A 81.366 161 16 5 665 825 651748632 651748778 4.360000e-23 119
5 TraesCS5A01G478300 chr5B 89.027 1367 114 18 419 1771 659703851 659705195 0.000000e+00 1661
6 TraesCS5A01G478300 chr5B 87.253 1365 120 13 417 1759 659638103 659639435 0.000000e+00 1507
7 TraesCS5A01G478300 chr5B 83.743 529 56 6 997 1498 659743610 659744135 8.090000e-130 473
8 TraesCS5A01G478300 chr5B 81.536 612 70 15 918 1498 659739457 659740056 4.870000e-127 464
9 TraesCS5A01G478300 chr5B 84.840 376 45 7 1133 1499 659471580 659471208 3.930000e-98 368
10 TraesCS5A01G478300 chr5B 92.105 114 8 1 654 767 659743167 659743279 2.570000e-35 159
11 TraesCS5A01G478300 chr5D 82.095 888 97 23 997 1838 525325699 525326570 0.000000e+00 702
12 TraesCS5A01G478300 chr5D 82.594 609 67 18 914 1498 525321787 525322380 3.710000e-138 501
13 TraesCS5A01G478300 chr5D 80.907 529 64 20 997 1499 525086440 525085923 1.400000e-102 383
14 TraesCS5A01G478300 chr5D 95.238 105 5 0 656 760 525378156 525378260 1.540000e-37 167
15 TraesCS5A01G478300 chr5D 94.937 79 4 0 669 747 525325328 525325406 9.380000e-25 124
16 TraesCS5A01G478300 chr5D 90.217 92 9 0 669 760 23863153 23863244 1.210000e-23 121
17 TraesCS5A01G478300 chr2D 92.040 201 12 3 227 423 557094733 557094533 1.890000e-71 279
18 TraesCS5A01G478300 chr2D 91.960 199 12 3 227 421 579479841 579480039 2.450000e-70 276
19 TraesCS5A01G478300 chr2D 91.176 204 14 4 227 426 36803024 36803227 8.800000e-70 274
20 TraesCS5A01G478300 chrUn 92.386 197 11 4 227 419 162253097 162253293 6.800000e-71 278
21 TraesCS5A01G478300 chr2A 87.023 262 15 4 177 419 123415001 123415262 6.800000e-71 278
22 TraesCS5A01G478300 chr2A 90.419 167 13 2 259 422 77695135 77695301 1.500000e-52 217
23 TraesCS5A01G478300 chr4A 91.960 199 12 4 227 421 94497977 94497779 2.450000e-70 276
24 TraesCS5A01G478300 chr4D 90.385 208 16 4 227 430 504259418 504259625 1.140000e-68 270
25 TraesCS5A01G478300 chr4D 86.508 252 24 7 175 422 488714496 488714741 4.100000e-68 268
26 TraesCS5A01G478300 chr4D 90.361 166 13 2 259 421 36536055 36535890 5.410000e-52 215
27 TraesCS5A01G478300 chr4D 89.157 166 15 3 259 421 415104103 415104268 1.170000e-48 204
28 TraesCS5A01G478300 chr4D 87.952 166 15 4 259 421 433702143 433702306 9.120000e-45 191
29 TraesCS5A01G478300 chr4D 91.045 134 9 3 259 389 322861180 322861313 7.100000e-41 178
30 TraesCS5A01G478300 chr1A 84.942 259 29 6 177 427 539732119 539732375 1.150000e-63 254
31 TraesCS5A01G478300 chr6A 84.756 164 22 2 259 419 10315273 10315110 7.150000e-36 161
32 TraesCS5A01G478300 chr7A 80.000 180 7 14 173 323 80749855 80749676 3.400000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G478300 chr5A 651757950 651760447 2497 False 2055.000000 3506 100.000000 1 2498 2 chr5A.!!$F3 2497
1 TraesCS5A01G478300 chr5A 651734258 651734805 547 False 496.000000 496 83.750000 965 1498 1 chr5A.!!$F1 533
2 TraesCS5A01G478300 chr5A 651578809 651579340 531 True 431.000000 431 82.430000 1001 1499 1 chr5A.!!$R1 498
3 TraesCS5A01G478300 chr5B 659703851 659705195 1344 False 1661.000000 1661 89.027000 419 1771 1 chr5B.!!$F2 1352
4 TraesCS5A01G478300 chr5B 659638103 659639435 1332 False 1507.000000 1507 87.253000 417 1759 1 chr5B.!!$F1 1342
5 TraesCS5A01G478300 chr5B 659739457 659744135 4678 False 365.333333 473 85.794667 654 1498 3 chr5B.!!$F3 844
6 TraesCS5A01G478300 chr5D 525321787 525326570 4783 False 442.333333 702 86.542000 669 1838 3 chr5D.!!$F3 1169
7 TraesCS5A01G478300 chr5D 525085923 525086440 517 True 383.000000 383 80.907000 997 1499 1 chr5D.!!$R1 502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
115 116 0.035317 AGAAGCTGCGTCATTGGACA 59.965 50.0 17.46 0.0 44.54 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1873 5918 0.47008 TCAAAATGGACCGGCCCAAA 60.47 50.0 15.61 0.0 40.04 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.701073 TTCCGTCAGAAGAGAACGTC 57.299 50.000 0.00 0.00 0.00 4.34
25 26 0.516001 TCCGTCAGAAGAGAACGTCG 59.484 55.000 0.00 0.00 0.00 5.12
27 28 0.516001 CGTCAGAAGAGAACGTCGGA 59.484 55.000 0.00 0.00 0.00 4.55
28 29 1.725292 CGTCAGAAGAGAACGTCGGAC 60.725 57.143 0.00 0.00 42.30 4.79
29 30 1.266175 GTCAGAAGAGAACGTCGGACA 59.734 52.381 9.10 0.00 43.87 4.02
30 31 2.095161 GTCAGAAGAGAACGTCGGACAT 60.095 50.000 9.10 0.00 43.87 3.06
31 32 3.126514 GTCAGAAGAGAACGTCGGACATA 59.873 47.826 9.10 0.00 43.87 2.29
32 33 3.126514 TCAGAAGAGAACGTCGGACATAC 59.873 47.826 9.10 0.00 0.00 2.39
33 34 2.422832 AGAAGAGAACGTCGGACATACC 59.577 50.000 9.10 0.00 0.00 2.73
34 35 1.830279 AGAGAACGTCGGACATACCA 58.170 50.000 9.10 0.00 38.90 3.25
35 36 1.471684 AGAGAACGTCGGACATACCAC 59.528 52.381 9.10 0.00 38.90 4.16
36 37 0.529378 AGAACGTCGGACATACCACC 59.471 55.000 9.10 0.00 38.90 4.61
37 38 0.529378 GAACGTCGGACATACCACCT 59.471 55.000 9.10 0.00 38.90 4.00
38 39 1.745087 GAACGTCGGACATACCACCTA 59.255 52.381 9.10 0.00 38.90 3.08
39 40 1.838112 ACGTCGGACATACCACCTAA 58.162 50.000 9.10 0.00 38.90 2.69
42 43 2.105766 GTCGGACATACCACCTAACCT 58.894 52.381 2.62 0.00 38.90 3.50
43 44 2.498885 GTCGGACATACCACCTAACCTT 59.501 50.000 2.62 0.00 38.90 3.50
44 45 2.498481 TCGGACATACCACCTAACCTTG 59.502 50.000 0.00 0.00 38.90 3.61
47 48 4.659115 GGACATACCACCTAACCTTGTTT 58.341 43.478 0.00 0.00 38.79 2.83
49 50 5.514310 GGACATACCACCTAACCTTGTTTCT 60.514 44.000 0.00 0.00 38.79 2.52
50 51 5.557866 ACATACCACCTAACCTTGTTTCTC 58.442 41.667 0.00 0.00 0.00 2.87
51 52 5.309806 ACATACCACCTAACCTTGTTTCTCT 59.690 40.000 0.00 0.00 0.00 3.10
53 54 3.458487 ACCACCTAACCTTGTTTCTCTGT 59.542 43.478 0.00 0.00 0.00 3.41
55 56 5.131475 ACCACCTAACCTTGTTTCTCTGTAA 59.869 40.000 0.00 0.00 0.00 2.41
56 57 6.059484 CCACCTAACCTTGTTTCTCTGTAAA 58.941 40.000 0.00 0.00 0.00 2.01
74 75 2.992847 AAAAAGGTACCCCCTCCAAG 57.007 50.000 8.74 0.00 45.47 3.61
77 78 0.195096 AAGGTACCCCCTCCAAGTCA 59.805 55.000 8.74 0.00 45.47 3.41
79 80 1.069775 GGTACCCCCTCCAAGTCAAA 58.930 55.000 0.00 0.00 0.00 2.69
80 81 1.639108 GGTACCCCCTCCAAGTCAAAT 59.361 52.381 0.00 0.00 0.00 2.32
81 82 2.042569 GGTACCCCCTCCAAGTCAAATT 59.957 50.000 0.00 0.00 0.00 1.82
82 83 3.267551 GGTACCCCCTCCAAGTCAAATTA 59.732 47.826 0.00 0.00 0.00 1.40
84 85 4.692523 ACCCCCTCCAAGTCAAATTAAT 57.307 40.909 0.00 0.00 0.00 1.40
87 88 4.777366 CCCCCTCCAAGTCAAATTAATTGT 59.223 41.667 0.39 0.00 40.11 2.71
88 89 5.105351 CCCCCTCCAAGTCAAATTAATTGTC 60.105 44.000 0.39 0.00 40.11 3.18
89 90 5.480073 CCCCTCCAAGTCAAATTAATTGTCA 59.520 40.000 0.39 0.00 40.11 3.58
90 91 6.350445 CCCCTCCAAGTCAAATTAATTGTCAG 60.350 42.308 0.39 0.00 40.11 3.51
93 94 7.255590 CCTCCAAGTCAAATTAATTGTCAGTGT 60.256 37.037 0.39 0.00 40.11 3.55
95 96 9.295825 TCCAAGTCAAATTAATTGTCAGTGTAT 57.704 29.630 0.39 0.00 40.11 2.29
104 105 7.539712 TTAATTGTCAGTGTATAGAAGCTGC 57.460 36.000 0.00 0.00 0.00 5.25
106 107 2.492088 TGTCAGTGTATAGAAGCTGCGT 59.508 45.455 0.00 0.00 0.00 5.24
107 108 3.109619 GTCAGTGTATAGAAGCTGCGTC 58.890 50.000 7.52 7.52 0.00 5.19
108 109 2.752903 TCAGTGTATAGAAGCTGCGTCA 59.247 45.455 17.46 4.53 0.00 4.35
109 110 3.381590 TCAGTGTATAGAAGCTGCGTCAT 59.618 43.478 17.46 10.90 0.00 3.06
110 111 4.115516 CAGTGTATAGAAGCTGCGTCATT 58.884 43.478 17.46 6.89 0.00 2.57
112 113 3.246226 GTGTATAGAAGCTGCGTCATTGG 59.754 47.826 17.46 0.00 0.00 3.16
113 114 2.988010 ATAGAAGCTGCGTCATTGGA 57.012 45.000 17.46 0.00 0.00 3.53
115 116 0.035317 AGAAGCTGCGTCATTGGACA 59.965 50.000 17.46 0.00 44.54 4.02
116 117 1.089920 GAAGCTGCGTCATTGGACAT 58.910 50.000 10.72 0.00 44.54 3.06
117 118 1.470098 GAAGCTGCGTCATTGGACATT 59.530 47.619 10.72 0.00 44.54 2.71
118 119 0.806868 AGCTGCGTCATTGGACATTG 59.193 50.000 0.00 0.00 44.54 2.82
122 123 2.741517 CTGCGTCATTGGACATTGTGTA 59.258 45.455 0.00 0.00 44.54 2.90
124 125 4.508662 TGCGTCATTGGACATTGTGTATA 58.491 39.130 0.00 0.00 44.54 1.47
126 127 4.570772 GCGTCATTGGACATTGTGTATAGT 59.429 41.667 0.00 0.00 44.54 2.12
127 128 5.502382 GCGTCATTGGACATTGTGTATAGTG 60.502 44.000 0.00 0.00 44.54 2.74
129 130 5.880332 GTCATTGGACATTGTGTATAGTGGT 59.120 40.000 0.00 0.00 43.73 4.16
130 131 6.374333 GTCATTGGACATTGTGTATAGTGGTT 59.626 38.462 0.00 0.00 43.73 3.67
133 134 3.063452 GGACATTGTGTATAGTGGTTGCG 59.937 47.826 0.00 0.00 0.00 4.85
134 135 3.930229 GACATTGTGTATAGTGGTTGCGA 59.070 43.478 0.00 0.00 0.00 5.10
135 136 3.682858 ACATTGTGTATAGTGGTTGCGAC 59.317 43.478 0.00 0.00 0.00 5.19
136 137 1.985334 TGTGTATAGTGGTTGCGACG 58.015 50.000 0.00 0.00 0.00 5.12
137 138 1.540707 TGTGTATAGTGGTTGCGACGA 59.459 47.619 0.00 0.00 0.00 4.20
138 139 2.164827 TGTGTATAGTGGTTGCGACGAT 59.835 45.455 0.00 0.00 0.00 3.73
140 141 4.142425 TGTGTATAGTGGTTGCGACGATTA 60.142 41.667 0.00 0.00 0.00 1.75
142 143 5.461078 GTGTATAGTGGTTGCGACGATTAAT 59.539 40.000 0.00 0.00 0.00 1.40
143 144 6.019318 GTGTATAGTGGTTGCGACGATTAATT 60.019 38.462 0.00 0.00 0.00 1.40
145 146 7.705752 TGTATAGTGGTTGCGACGATTAATTAA 59.294 33.333 0.00 0.00 0.00 1.40
146 147 5.212589 AGTGGTTGCGACGATTAATTAAC 57.787 39.130 0.00 0.00 0.00 2.01
147 148 4.691685 AGTGGTTGCGACGATTAATTAACA 59.308 37.500 0.00 0.00 0.00 2.41
149 150 6.025280 GTGGTTGCGACGATTAATTAACAAT 58.975 36.000 0.00 0.00 0.00 2.71
150 151 6.193959 GTGGTTGCGACGATTAATTAACAATC 59.806 38.462 0.00 0.74 0.00 2.67
159 160 7.932120 CGATTAATTAACAATCGGAGAGAGT 57.068 36.000 19.25 0.00 46.88 3.24
161 162 9.627395 CGATTAATTAACAATCGGAGAGAGTAT 57.373 33.333 19.25 0.00 46.88 2.12
166 167 9.667107 AATTAACAATCGGAGAGAGTATCAAAA 57.333 29.630 0.00 0.00 43.63 2.44
167 168 9.838339 ATTAACAATCGGAGAGAGTATCAAAAT 57.162 29.630 0.00 0.00 43.63 1.82
168 169 9.667107 TTAACAATCGGAGAGAGTATCAAAATT 57.333 29.630 0.00 0.00 43.63 1.82
169 170 8.567285 AACAATCGGAGAGAGTATCAAAATTT 57.433 30.769 0.00 0.00 43.63 1.82
170 171 8.567285 ACAATCGGAGAGAGTATCAAAATTTT 57.433 30.769 0.00 0.00 43.63 1.82
171 172 9.014297 ACAATCGGAGAGAGTATCAAAATTTTT 57.986 29.630 0.00 0.00 43.63 1.94
173 174 9.454859 AATCGGAGAGAGTATCAAAATTTTTCT 57.545 29.630 0.00 1.12 43.63 2.52
175 176 9.284968 TCGGAGAGAGTATCAAAATTTTTCTTT 57.715 29.630 0.00 0.00 37.82 2.52
192 193 5.693769 TTCTTTAGACTAATCACAGGGGG 57.306 43.478 0.00 0.00 0.00 5.40
213 214 6.190587 GGGGGAGTAACTTAGAGTAGTAACA 58.809 44.000 0.00 0.00 0.00 2.41
214 215 6.838090 GGGGGAGTAACTTAGAGTAGTAACAT 59.162 42.308 0.00 0.00 0.00 2.71
215 216 7.201893 GGGGGAGTAACTTAGAGTAGTAACATG 60.202 44.444 0.00 0.00 0.00 3.21
216 217 7.201835 GGGAGTAACTTAGAGTAGTAACATGC 58.798 42.308 0.00 0.00 0.00 4.06
217 218 7.147949 GGGAGTAACTTAGAGTAGTAACATGCA 60.148 40.741 0.00 0.00 0.00 3.96
218 219 8.414778 GGAGTAACTTAGAGTAGTAACATGCAT 58.585 37.037 0.00 0.00 0.00 3.96
246 247 8.975410 GTTACTAGTAACATATGTGTGTGTCA 57.025 34.615 31.74 0.00 43.55 3.58
247 248 9.582431 GTTACTAGTAACATATGTGTGTGTCAT 57.418 33.333 31.74 0.00 43.55 3.06
248 249 9.581099 TTACTAGTAACATATGTGTGTGTCATG 57.419 33.333 9.63 0.00 38.92 3.07
249 250 5.801350 AGTAACATATGTGTGTGTCATGC 57.199 39.130 9.63 0.00 38.92 4.06
250 251 5.244755 AGTAACATATGTGTGTGTCATGCA 58.755 37.500 9.63 0.00 38.92 3.96
251 252 5.882000 AGTAACATATGTGTGTGTCATGCAT 59.118 36.000 9.63 0.00 38.92 3.96
252 253 4.888038 ACATATGTGTGTGTCATGCATC 57.112 40.909 7.78 0.00 37.14 3.91
253 254 4.263435 ACATATGTGTGTGTCATGCATCA 58.737 39.130 7.78 0.00 37.14 3.07
255 256 2.259266 TGTGTGTGTCATGCATCACT 57.741 45.000 16.78 0.00 36.51 3.41
256 257 2.574450 TGTGTGTGTCATGCATCACTT 58.426 42.857 16.78 0.00 36.51 3.16
257 258 2.950975 TGTGTGTGTCATGCATCACTTT 59.049 40.909 16.78 0.00 36.51 2.66
258 259 4.133078 TGTGTGTGTCATGCATCACTTTA 58.867 39.130 16.78 3.91 36.51 1.85
259 260 4.761227 TGTGTGTGTCATGCATCACTTTAT 59.239 37.500 16.78 0.00 36.51 1.40
260 261 5.241285 TGTGTGTGTCATGCATCACTTTATT 59.759 36.000 16.78 0.00 36.51 1.40
261 262 6.151691 GTGTGTGTCATGCATCACTTTATTT 58.848 36.000 16.78 0.00 35.82 1.40
262 263 7.040823 TGTGTGTGTCATGCATCACTTTATTTA 60.041 33.333 16.78 0.00 36.51 1.40
263 264 7.970061 GTGTGTGTCATGCATCACTTTATTTAT 59.030 33.333 16.78 0.00 35.82 1.40
264 265 8.522003 TGTGTGTCATGCATCACTTTATTTATT 58.478 29.630 16.78 0.00 35.82 1.40
267 268 9.669353 GTGTCATGCATCACTTTATTTATTAGG 57.331 33.333 1.37 0.00 0.00 2.69
299 300 9.107177 GACTCATCTTTTCTTGATATGTGTGAT 57.893 33.333 0.00 0.00 0.00 3.06
300 301 8.890718 ACTCATCTTTTCTTGATATGTGTGATG 58.109 33.333 0.00 0.00 0.00 3.07
301 302 8.797350 TCATCTTTTCTTGATATGTGTGATGT 57.203 30.769 0.00 0.00 32.21 3.06
302 303 9.234827 TCATCTTTTCTTGATATGTGTGATGTT 57.765 29.630 0.00 0.00 32.21 2.71
305 306 9.500785 TCTTTTCTTGATATGTGTGATGTTACA 57.499 29.630 0.00 0.00 0.00 2.41
306 307 9.764870 CTTTTCTTGATATGTGTGATGTTACAG 57.235 33.333 0.00 0.00 0.00 2.74
307 308 8.846943 TTTCTTGATATGTGTGATGTTACAGT 57.153 30.769 0.00 0.00 0.00 3.55
308 309 9.936759 TTTCTTGATATGTGTGATGTTACAGTA 57.063 29.630 0.00 0.00 0.00 2.74
309 310 9.936759 TTCTTGATATGTGTGATGTTACAGTAA 57.063 29.630 0.00 0.00 0.00 2.24
311 312 9.371136 CTTGATATGTGTGATGTTACAGTAACT 57.629 33.333 21.56 9.41 39.38 2.24
315 316 6.340962 TGTGTGATGTTACAGTAACTAGCT 57.659 37.500 21.56 6.57 39.38 3.32
316 317 7.457024 TGTGTGATGTTACAGTAACTAGCTA 57.543 36.000 21.56 4.25 39.38 3.32
317 318 8.063200 TGTGTGATGTTACAGTAACTAGCTAT 57.937 34.615 21.56 8.59 39.38 2.97
319 320 7.974501 GTGTGATGTTACAGTAACTAGCTATGT 59.025 37.037 21.56 0.00 39.38 2.29
320 321 8.528643 TGTGATGTTACAGTAACTAGCTATGTT 58.471 33.333 21.56 7.75 39.38 2.71
370 371 7.886629 ACATGCCACATTATCTATTTTGTCT 57.113 32.000 0.00 0.00 0.00 3.41
371 372 8.978874 ACATGCCACATTATCTATTTTGTCTA 57.021 30.769 0.00 0.00 0.00 2.59
372 373 9.407380 ACATGCCACATTATCTATTTTGTCTAA 57.593 29.630 0.00 0.00 0.00 2.10
392 393 9.337396 TGTCTAAATAAATGTGATGATACCACC 57.663 33.333 0.00 0.00 33.80 4.61
393 394 9.561069 GTCTAAATAAATGTGATGATACCACCT 57.439 33.333 0.00 0.00 33.80 4.00
397 398 7.928307 ATAAATGTGATGATACCACCTATGC 57.072 36.000 0.00 0.00 33.80 3.14
398 399 5.573380 AATGTGATGATACCACCTATGCT 57.427 39.130 0.00 0.00 33.80 3.79
399 400 6.686484 AATGTGATGATACCACCTATGCTA 57.314 37.500 0.00 0.00 33.80 3.49
400 401 5.468540 TGTGATGATACCACCTATGCTAC 57.531 43.478 0.00 0.00 33.80 3.58
401 402 5.147767 TGTGATGATACCACCTATGCTACT 58.852 41.667 0.00 0.00 33.80 2.57
402 403 5.602561 TGTGATGATACCACCTATGCTACTT 59.397 40.000 0.00 0.00 33.80 2.24
403 404 6.159988 GTGATGATACCACCTATGCTACTTC 58.840 44.000 0.00 0.00 0.00 3.01
404 405 5.246203 TGATGATACCACCTATGCTACTTCC 59.754 44.000 0.00 0.00 0.00 3.46
405 406 4.552674 TGATACCACCTATGCTACTTCCA 58.447 43.478 0.00 0.00 0.00 3.53
406 407 4.344102 TGATACCACCTATGCTACTTCCAC 59.656 45.833 0.00 0.00 0.00 4.02
407 408 2.834113 ACCACCTATGCTACTTCCACT 58.166 47.619 0.00 0.00 0.00 4.00
408 409 3.990369 ACCACCTATGCTACTTCCACTA 58.010 45.455 0.00 0.00 0.00 2.74
409 410 4.557705 ACCACCTATGCTACTTCCACTAT 58.442 43.478 0.00 0.00 0.00 2.12
410 411 4.345257 ACCACCTATGCTACTTCCACTATG 59.655 45.833 0.00 0.00 0.00 2.23
411 412 4.262635 CCACCTATGCTACTTCCACTATGG 60.263 50.000 0.00 0.00 39.43 2.74
412 413 3.904339 ACCTATGCTACTTCCACTATGGG 59.096 47.826 0.00 0.00 38.32 4.00
413 414 3.904339 CCTATGCTACTTCCACTATGGGT 59.096 47.826 0.00 0.00 38.32 4.51
414 415 5.084519 CCTATGCTACTTCCACTATGGGTA 58.915 45.833 0.00 0.00 38.32 3.69
415 416 5.186021 CCTATGCTACTTCCACTATGGGTAG 59.814 48.000 6.83 6.83 38.32 3.18
416 417 3.990369 TGCTACTTCCACTATGGGTAGT 58.010 45.455 10.90 9.54 41.84 2.73
418 419 4.216708 GCTACTTCCACTATGGGTAGTCT 58.783 47.826 10.90 0.00 39.12 3.24
419 420 4.650131 GCTACTTCCACTATGGGTAGTCTT 59.350 45.833 10.90 0.00 39.12 3.01
420 421 5.832060 GCTACTTCCACTATGGGTAGTCTTA 59.168 44.000 10.90 0.00 39.12 2.10
421 422 6.016108 GCTACTTCCACTATGGGTAGTCTTAG 60.016 46.154 10.90 4.97 39.12 2.18
422 423 6.088541 ACTTCCACTATGGGTAGTCTTAGA 57.911 41.667 0.00 0.00 39.12 2.10
423 424 6.500336 ACTTCCACTATGGGTAGTCTTAGAA 58.500 40.000 0.00 0.00 39.12 2.10
426 427 6.738635 TCCACTATGGGTAGTCTTAGAAGAA 58.261 40.000 0.00 0.00 39.12 2.52
428 429 6.608002 CCACTATGGGTAGTCTTAGAAGAACT 59.392 42.308 0.00 0.00 39.12 3.01
449 450 8.393366 AGAACTAAACGTACCAAACTCTTTTTC 58.607 33.333 0.00 0.00 0.00 2.29
450 451 6.708676 ACTAAACGTACCAAACTCTTTTTCG 58.291 36.000 0.00 0.00 0.00 3.46
586 588 5.359756 TGAATGATCCTGTACGATCCAAAG 58.640 41.667 7.91 0.00 38.32 2.77
592 594 3.637229 TCCTGTACGATCCAAAGATCCTC 59.363 47.826 0.00 0.00 45.32 3.71
623 625 1.405272 AACGTTCCAGACCCTTCCGT 61.405 55.000 0.00 0.00 0.00 4.69
630 632 0.393077 CAGACCCTTCCGTTGTCACT 59.607 55.000 0.00 0.00 0.00 3.41
647 649 4.717629 TCTCACGCGCCGTCCAAG 62.718 66.667 5.73 1.22 38.32 3.61
698 4513 2.203139 TTGTGGCGTGACAGGTGG 60.203 61.111 0.00 0.00 0.00 4.61
761 4577 2.159057 ACGTACGACCACAAATATCCCC 60.159 50.000 24.41 0.00 0.00 4.81
767 4583 3.742954 CGACCACAAATATCCCCATCGAA 60.743 47.826 0.00 0.00 0.00 3.71
809 4654 3.155470 GAATGTCGCGGTGGCATCG 62.155 63.158 17.35 17.35 39.92 3.84
885 4769 1.003355 CCACCTACTGCCCACACAG 60.003 63.158 0.00 0.00 43.59 3.66
896 4780 5.032846 ACTGCCCACACAGCCTATATATAT 58.967 41.667 0.00 0.00 41.60 0.86
897 4781 6.202331 ACTGCCCACACAGCCTATATATATA 58.798 40.000 2.49 2.49 41.60 0.86
898 4782 6.672218 ACTGCCCACACAGCCTATATATATAA 59.328 38.462 4.06 0.00 41.60 0.98
899 4783 6.884832 TGCCCACACAGCCTATATATATAAC 58.115 40.000 4.06 0.21 0.00 1.89
900 4784 6.672218 TGCCCACACAGCCTATATATATAACT 59.328 38.462 4.06 2.33 0.00 2.24
901 4785 6.986817 GCCCACACAGCCTATATATATAACTG 59.013 42.308 20.72 20.72 32.69 3.16
902 4786 6.986817 CCCACACAGCCTATATATATAACTGC 59.013 42.308 21.56 15.74 30.99 4.40
903 4787 6.697455 CCACACAGCCTATATATATAACTGCG 59.303 42.308 21.56 17.64 30.99 5.18
904 4788 6.697455 CACACAGCCTATATATATAACTGCGG 59.303 42.308 21.56 18.08 30.99 5.69
905 4789 5.692204 CACAGCCTATATATATAACTGCGGC 59.308 44.000 21.56 19.30 30.99 6.53
906 4790 5.221461 ACAGCCTATATATATAACTGCGGCC 60.221 44.000 21.56 0.00 35.71 6.13
907 4791 4.022242 AGCCTATATATATAACTGCGGCCG 60.022 45.833 24.05 24.05 35.71 6.13
908 4792 4.235360 CCTATATATATAACTGCGGCCGC 58.765 47.826 42.35 42.35 42.35 6.53
911 4809 0.245539 TATATAACTGCGGCCGCCTC 59.754 55.000 44.42 21.08 41.09 4.70
948 4898 3.236816 CAACACAAACGAGCATCAATCC 58.763 45.455 0.00 0.00 33.17 3.01
980 4930 2.775890 CGGCTCCAGCAGATCATTTAT 58.224 47.619 0.03 0.00 44.36 1.40
1019 4978 4.440829 GGGGGCGGGAATGAAGCA 62.441 66.667 0.00 0.00 0.00 3.91
1441 5460 4.328041 CTCTGTCGGAGCAGGAGA 57.672 61.111 0.00 0.00 37.12 3.71
1523 5548 7.875554 GGGTCTTTAGAATCAGATAGGTTCATC 59.124 40.741 0.00 0.00 0.00 2.92
1544 5577 2.287427 CGTTCGACCTTGTACAGAGTGT 60.287 50.000 4.72 0.00 0.00 3.55
1582 5617 4.320202 GCGTTTCTGTTCTTGCTGGATAAA 60.320 41.667 0.00 0.00 0.00 1.40
1605 5640 0.811281 GCTTTGGATCGGTCCCTTTG 59.189 55.000 13.41 0.86 44.41 2.77
1641 5678 4.847198 TGGAGATTTACATGCACAGATGT 58.153 39.130 0.00 0.00 39.87 3.06
1685 5724 6.470557 AATCAAGGCAAATTCATTTGTTCG 57.529 33.333 12.71 1.97 46.63 3.95
1713 5752 4.400845 CAATTGACAGATTCTTGCACTCG 58.599 43.478 0.00 0.00 0.00 4.18
1745 5784 6.591448 TGTTCTATGACTATGCTGTTGTTCAG 59.409 38.462 0.00 0.00 46.12 3.02
1759 5798 6.012658 TGTTGTTCAGCTCCATTGTTTATC 57.987 37.500 0.00 0.00 0.00 1.75
1764 5803 8.523915 TGTTCAGCTCCATTGTTTATCATAAT 57.476 30.769 0.00 0.00 0.00 1.28
1766 5805 9.807649 GTTCAGCTCCATTGTTTATCATAATTT 57.192 29.630 0.00 0.00 0.00 1.82
1775 5820 8.961092 CATTGTTTATCATAATTTCAAGCCTCG 58.039 33.333 0.00 0.00 0.00 4.63
1787 5832 3.135994 TCAAGCCTCGGTTTGTAACTTC 58.864 45.455 11.49 0.00 37.54 3.01
1792 5837 3.751698 GCCTCGGTTTGTAACTTCAGATT 59.248 43.478 0.00 0.00 0.00 2.40
1799 5844 6.018262 CGGTTTGTAACTTCAGATTGTCTCAA 60.018 38.462 0.00 0.00 0.00 3.02
1810 5855 6.758254 TCAGATTGTCTCAACATTGACAGTA 58.242 36.000 0.00 0.00 42.98 2.74
1811 5856 6.646653 TCAGATTGTCTCAACATTGACAGTAC 59.353 38.462 0.00 0.00 42.98 2.73
1812 5857 6.424812 CAGATTGTCTCAACATTGACAGTACA 59.575 38.462 0.00 0.00 42.98 2.90
1821 5866 4.569943 ACATTGACAGTACACAGATGTCC 58.430 43.478 9.07 0.00 42.11 4.02
1834 5879 6.049149 ACACAGATGTCCGGAGTATTAATTG 58.951 40.000 3.06 0.00 31.55 2.32
1838 5883 6.591834 CAGATGTCCGGAGTATTAATTGGATC 59.408 42.308 3.06 0.00 0.00 3.36
1839 5884 5.880164 TGTCCGGAGTATTAATTGGATCA 57.120 39.130 3.06 0.00 0.00 2.92
1840 5885 5.607477 TGTCCGGAGTATTAATTGGATCAC 58.393 41.667 3.06 0.00 0.00 3.06
1841 5886 5.129650 TGTCCGGAGTATTAATTGGATCACA 59.870 40.000 3.06 0.00 0.00 3.58
1842 5887 6.053005 GTCCGGAGTATTAATTGGATCACAA 58.947 40.000 3.06 0.00 44.54 3.33
1855 5900 5.692115 TGGATCACAATAGCTAAAGGTCA 57.308 39.130 0.00 0.00 0.00 4.02
1856 5901 5.674525 TGGATCACAATAGCTAAAGGTCAG 58.325 41.667 0.00 0.00 0.00 3.51
1857 5902 5.189736 TGGATCACAATAGCTAAAGGTCAGT 59.810 40.000 0.00 0.00 0.00 3.41
1858 5903 5.755861 GGATCACAATAGCTAAAGGTCAGTC 59.244 44.000 0.00 0.00 0.00 3.51
1859 5904 5.738619 TCACAATAGCTAAAGGTCAGTCA 57.261 39.130 0.00 0.00 0.00 3.41
1860 5905 6.109156 TCACAATAGCTAAAGGTCAGTCAA 57.891 37.500 0.00 0.00 0.00 3.18
1861 5906 5.932303 TCACAATAGCTAAAGGTCAGTCAAC 59.068 40.000 0.00 0.00 0.00 3.18
1862 5907 5.934625 CACAATAGCTAAAGGTCAGTCAACT 59.065 40.000 0.00 0.00 0.00 3.16
1863 5908 5.934625 ACAATAGCTAAAGGTCAGTCAACTG 59.065 40.000 0.00 3.69 45.08 3.16
1877 5922 6.774354 CAGTCAACTGATTTTTGGATTTGG 57.226 37.500 4.05 0.00 46.59 3.28
1878 5923 5.697633 CAGTCAACTGATTTTTGGATTTGGG 59.302 40.000 4.05 0.00 46.59 4.12
1879 5924 4.452114 GTCAACTGATTTTTGGATTTGGGC 59.548 41.667 0.00 0.00 0.00 5.36
1880 5925 3.701205 ACTGATTTTTGGATTTGGGCC 57.299 42.857 0.00 0.00 0.00 5.80
1881 5926 2.028203 ACTGATTTTTGGATTTGGGCCG 60.028 45.455 0.00 0.00 0.00 6.13
1882 5927 1.277557 TGATTTTTGGATTTGGGCCGG 59.722 47.619 0.00 0.00 0.00 6.13
1883 5928 1.277842 GATTTTTGGATTTGGGCCGGT 59.722 47.619 1.90 0.00 0.00 5.28
1884 5929 0.682292 TTTTTGGATTTGGGCCGGTC 59.318 50.000 1.90 0.00 0.00 4.79
1885 5930 1.188871 TTTTGGATTTGGGCCGGTCC 61.189 55.000 21.35 21.35 0.00 4.46
1886 5931 2.373338 TTTGGATTTGGGCCGGTCCA 62.373 55.000 27.82 27.82 38.90 4.02
1887 5932 2.161713 TTGGATTTGGGCCGGTCCAT 62.162 55.000 32.19 16.51 40.22 3.41
1888 5933 1.381191 GGATTTGGGCCGGTCCATT 60.381 57.895 32.19 20.45 36.58 3.16
1889 5934 0.975556 GGATTTGGGCCGGTCCATTT 60.976 55.000 32.19 20.02 36.58 2.32
1890 5935 0.901827 GATTTGGGCCGGTCCATTTT 59.098 50.000 32.19 17.09 36.58 1.82
1891 5936 0.612744 ATTTGGGCCGGTCCATTTTG 59.387 50.000 32.19 0.00 36.58 2.44
1892 5937 0.470080 TTTGGGCCGGTCCATTTTGA 60.470 50.000 32.19 11.30 36.58 2.69
1893 5938 0.897863 TTGGGCCGGTCCATTTTGAG 60.898 55.000 32.19 0.00 36.58 3.02
1894 5939 1.001393 GGGCCGGTCCATTTTGAGA 60.001 57.895 23.50 0.00 36.21 3.27
1895 5940 0.610785 GGGCCGGTCCATTTTGAGAA 60.611 55.000 23.50 0.00 36.21 2.87
1896 5941 0.811281 GGCCGGTCCATTTTGAGAAG 59.189 55.000 1.90 0.00 34.01 2.85
1897 5942 1.613255 GGCCGGTCCATTTTGAGAAGA 60.613 52.381 1.90 0.00 34.01 2.87
2190 6235 1.369625 AAACGGATCATCAACGAGGC 58.630 50.000 0.00 0.00 0.00 4.70
2191 6236 0.249120 AACGGATCATCAACGAGGCA 59.751 50.000 0.00 0.00 0.00 4.75
2192 6237 0.249120 ACGGATCATCAACGAGGCAA 59.751 50.000 0.00 0.00 0.00 4.52
2193 6238 0.933097 CGGATCATCAACGAGGCAAG 59.067 55.000 0.00 0.00 0.00 4.01
2194 6239 1.471501 CGGATCATCAACGAGGCAAGA 60.472 52.381 0.00 0.00 0.00 3.02
2195 6240 2.208431 GGATCATCAACGAGGCAAGAG 58.792 52.381 0.00 0.00 0.00 2.85
2196 6241 2.208431 GATCATCAACGAGGCAAGAGG 58.792 52.381 0.00 0.00 0.00 3.69
2197 6242 0.250234 TCATCAACGAGGCAAGAGGG 59.750 55.000 0.00 0.00 0.00 4.30
2198 6243 0.250234 CATCAACGAGGCAAGAGGGA 59.750 55.000 0.00 0.00 0.00 4.20
2199 6244 1.134280 CATCAACGAGGCAAGAGGGAT 60.134 52.381 0.00 0.00 0.00 3.85
2200 6245 0.250234 TCAACGAGGCAAGAGGGATG 59.750 55.000 0.00 0.00 0.00 3.51
2201 6246 0.745845 CAACGAGGCAAGAGGGATGG 60.746 60.000 0.00 0.00 0.00 3.51
2202 6247 1.201429 AACGAGGCAAGAGGGATGGT 61.201 55.000 0.00 0.00 0.00 3.55
2203 6248 1.144936 CGAGGCAAGAGGGATGGTC 59.855 63.158 0.00 0.00 0.00 4.02
2204 6249 1.144936 GAGGCAAGAGGGATGGTCG 59.855 63.158 0.00 0.00 0.00 4.79
2205 6250 2.190578 GGCAAGAGGGATGGTCGG 59.809 66.667 0.00 0.00 0.00 4.79
2206 6251 2.190578 GCAAGAGGGATGGTCGGG 59.809 66.667 0.00 0.00 0.00 5.14
2207 6252 2.911143 CAAGAGGGATGGTCGGGG 59.089 66.667 0.00 0.00 0.00 5.73
2208 6253 2.366972 AAGAGGGATGGTCGGGGG 60.367 66.667 0.00 0.00 0.00 5.40
2211 6256 3.768833 GAGGGATGGTCGGGGGCTA 62.769 68.421 0.00 0.00 0.00 3.93
2212 6257 3.242291 GGGATGGTCGGGGGCTAG 61.242 72.222 0.00 0.00 0.00 3.42
2213 6258 3.242291 GGATGGTCGGGGGCTAGG 61.242 72.222 0.00 0.00 0.00 3.02
2214 6259 3.242291 GATGGTCGGGGGCTAGGG 61.242 72.222 0.00 0.00 0.00 3.53
2226 6271 4.087892 CTAGGGCAGCACAGCGGT 62.088 66.667 0.00 0.00 34.64 5.68
2249 6294 4.299796 GCAGTTGGGGGAGGGCAA 62.300 66.667 0.00 0.00 0.00 4.52
2250 6295 2.772924 CAGTTGGGGGAGGGCAAT 59.227 61.111 0.00 0.00 0.00 3.56
2251 6296 2.006748 CAGTTGGGGGAGGGCAATA 58.993 57.895 0.00 0.00 0.00 1.90
2252 6297 0.395724 CAGTTGGGGGAGGGCAATAC 60.396 60.000 0.00 0.00 0.00 1.89
2253 6298 0.849094 AGTTGGGGGAGGGCAATACA 60.849 55.000 0.00 0.00 0.00 2.29
2254 6299 0.395724 GTTGGGGGAGGGCAATACAG 60.396 60.000 0.00 0.00 0.00 2.74
2255 6300 2.195956 GGGGGAGGGCAATACAGC 59.804 66.667 0.00 0.00 0.00 4.40
2256 6301 2.689691 GGGGGAGGGCAATACAGCA 61.690 63.158 0.00 0.00 35.83 4.41
2257 6302 1.306296 GGGGAGGGCAATACAGCAA 59.694 57.895 0.00 0.00 35.83 3.91
2258 6303 0.753111 GGGGAGGGCAATACAGCAAG 60.753 60.000 0.00 0.00 35.83 4.01
2259 6304 0.753111 GGGAGGGCAATACAGCAAGG 60.753 60.000 0.00 0.00 35.83 3.61
2260 6305 1.387295 GGAGGGCAATACAGCAAGGC 61.387 60.000 0.00 0.00 35.83 4.35
2261 6306 0.394899 GAGGGCAATACAGCAAGGCT 60.395 55.000 0.00 0.00 40.77 4.58
2306 6351 4.593864 GCGGAAGGAGGCGGCTAG 62.594 72.222 13.24 0.42 0.00 3.42
2307 6352 3.917760 CGGAAGGAGGCGGCTAGG 61.918 72.222 13.24 0.00 0.00 3.02
2332 6377 2.742372 CGGTGGGGCAGTTCGAAG 60.742 66.667 0.00 0.00 0.00 3.79
2333 6378 2.359975 GGTGGGGCAGTTCGAAGG 60.360 66.667 0.00 0.00 0.00 3.46
2334 6379 2.747686 GTGGGGCAGTTCGAAGGA 59.252 61.111 0.00 0.00 0.00 3.36
2335 6380 1.072505 GTGGGGCAGTTCGAAGGAA 59.927 57.895 0.00 0.00 0.00 3.36
2336 6381 0.955919 GTGGGGCAGTTCGAAGGAAG 60.956 60.000 0.00 0.00 31.49 3.46
2337 6382 1.125093 TGGGGCAGTTCGAAGGAAGA 61.125 55.000 0.00 0.00 31.49 2.87
2338 6383 0.036306 GGGGCAGTTCGAAGGAAGAA 59.964 55.000 0.00 0.00 31.49 2.52
2339 6384 1.443802 GGGCAGTTCGAAGGAAGAAG 58.556 55.000 0.00 0.00 31.49 2.85
2340 6385 1.002087 GGGCAGTTCGAAGGAAGAAGA 59.998 52.381 0.00 0.00 31.49 2.87
2341 6386 2.550208 GGGCAGTTCGAAGGAAGAAGAA 60.550 50.000 0.00 0.00 31.49 2.52
2342 6387 3.139077 GGCAGTTCGAAGGAAGAAGAAA 58.861 45.455 0.00 0.00 31.49 2.52
2343 6388 3.564225 GGCAGTTCGAAGGAAGAAGAAAA 59.436 43.478 0.00 0.00 31.49 2.29
2344 6389 4.036380 GGCAGTTCGAAGGAAGAAGAAAAA 59.964 41.667 0.00 0.00 31.49 1.94
2345 6390 5.278512 GGCAGTTCGAAGGAAGAAGAAAAAT 60.279 40.000 0.00 0.00 31.49 1.82
2346 6391 5.626955 GCAGTTCGAAGGAAGAAGAAAAATG 59.373 40.000 0.00 0.00 31.49 2.32
2347 6392 6.145535 CAGTTCGAAGGAAGAAGAAAAATGG 58.854 40.000 0.00 0.00 31.49 3.16
2348 6393 4.766404 TCGAAGGAAGAAGAAAAATGGC 57.234 40.909 0.00 0.00 0.00 4.40
2349 6394 3.506067 TCGAAGGAAGAAGAAAAATGGCC 59.494 43.478 0.00 0.00 0.00 5.36
2350 6395 3.255642 CGAAGGAAGAAGAAAAATGGCCA 59.744 43.478 8.56 8.56 0.00 5.36
2351 6396 4.616835 CGAAGGAAGAAGAAAAATGGCCAG 60.617 45.833 13.05 0.00 0.00 4.85
2352 6397 2.564504 AGGAAGAAGAAAAATGGCCAGC 59.435 45.455 13.05 0.00 0.00 4.85
2353 6398 2.599659 GAAGAAGAAAAATGGCCAGCG 58.400 47.619 13.05 0.00 0.00 5.18
2354 6399 0.890683 AGAAGAAAAATGGCCAGCGG 59.109 50.000 13.05 0.00 0.00 5.52
2355 6400 0.108662 GAAGAAAAATGGCCAGCGGG 60.109 55.000 13.05 0.00 37.18 6.13
2356 6401 0.541764 AAGAAAAATGGCCAGCGGGA 60.542 50.000 13.05 0.00 35.59 5.14
2357 6402 0.967380 AGAAAAATGGCCAGCGGGAG 60.967 55.000 13.05 0.00 35.59 4.30
2358 6403 1.948721 GAAAAATGGCCAGCGGGAGG 61.949 60.000 13.05 0.00 35.59 4.30
2359 6404 2.439553 AAAAATGGCCAGCGGGAGGA 62.440 55.000 13.05 0.00 35.59 3.71
2360 6405 2.439553 AAAATGGCCAGCGGGAGGAA 62.440 55.000 13.05 0.00 35.59 3.36
2361 6406 2.439553 AAATGGCCAGCGGGAGGAAA 62.440 55.000 13.05 0.00 35.59 3.13
2362 6407 2.439553 AATGGCCAGCGGGAGGAAAA 62.440 55.000 13.05 0.00 35.59 2.29
2363 6408 2.282887 GGCCAGCGGGAGGAAAAA 60.283 61.111 7.23 0.00 35.59 1.94
2364 6409 2.343426 GGCCAGCGGGAGGAAAAAG 61.343 63.158 7.23 0.00 35.59 2.27
2365 6410 1.303317 GCCAGCGGGAGGAAAAAGA 60.303 57.895 7.23 0.00 35.59 2.52
2366 6411 0.893727 GCCAGCGGGAGGAAAAAGAA 60.894 55.000 7.23 0.00 35.59 2.52
2367 6412 1.616159 CCAGCGGGAGGAAAAAGAAA 58.384 50.000 0.00 0.00 35.59 2.52
2368 6413 1.541588 CCAGCGGGAGGAAAAAGAAAG 59.458 52.381 0.00 0.00 35.59 2.62
2369 6414 2.504367 CAGCGGGAGGAAAAAGAAAGA 58.496 47.619 0.00 0.00 0.00 2.52
2370 6415 2.485814 CAGCGGGAGGAAAAAGAAAGAG 59.514 50.000 0.00 0.00 0.00 2.85
2371 6416 2.372172 AGCGGGAGGAAAAAGAAAGAGA 59.628 45.455 0.00 0.00 0.00 3.10
2372 6417 3.009584 AGCGGGAGGAAAAAGAAAGAGAT 59.990 43.478 0.00 0.00 0.00 2.75
2373 6418 3.375610 GCGGGAGGAAAAAGAAAGAGATC 59.624 47.826 0.00 0.00 0.00 2.75
2374 6419 3.942115 CGGGAGGAAAAAGAAAGAGATCC 59.058 47.826 0.00 0.00 0.00 3.36
2375 6420 4.565652 CGGGAGGAAAAAGAAAGAGATCCA 60.566 45.833 0.00 0.00 0.00 3.41
2376 6421 4.946772 GGGAGGAAAAAGAAAGAGATCCAG 59.053 45.833 0.00 0.00 0.00 3.86
2377 6422 5.515710 GGGAGGAAAAAGAAAGAGATCCAGT 60.516 44.000 0.00 0.00 0.00 4.00
2378 6423 6.296489 GGGAGGAAAAAGAAAGAGATCCAGTA 60.296 42.308 0.00 0.00 0.00 2.74
2379 6424 6.821160 GGAGGAAAAAGAAAGAGATCCAGTAG 59.179 42.308 0.00 0.00 0.00 2.57
2380 6425 7.323052 AGGAAAAAGAAAGAGATCCAGTAGT 57.677 36.000 0.00 0.00 0.00 2.73
2381 6426 7.750655 AGGAAAAAGAAAGAGATCCAGTAGTT 58.249 34.615 0.00 0.00 0.00 2.24
2382 6427 7.663493 AGGAAAAAGAAAGAGATCCAGTAGTTG 59.337 37.037 0.00 0.00 0.00 3.16
2383 6428 7.661847 GGAAAAAGAAAGAGATCCAGTAGTTGA 59.338 37.037 0.00 0.00 0.00 3.18
2384 6429 9.225436 GAAAAAGAAAGAGATCCAGTAGTTGAT 57.775 33.333 0.00 0.00 0.00 2.57
2385 6430 9.579932 AAAAAGAAAGAGATCCAGTAGTTGATT 57.420 29.630 0.00 0.00 0.00 2.57
2386 6431 9.579932 AAAAGAAAGAGATCCAGTAGTTGATTT 57.420 29.630 0.00 0.00 0.00 2.17
2387 6432 8.785329 AAGAAAGAGATCCAGTAGTTGATTTC 57.215 34.615 0.00 0.00 0.00 2.17
2388 6433 7.911651 AGAAAGAGATCCAGTAGTTGATTTCA 58.088 34.615 5.33 0.00 0.00 2.69
2389 6434 8.547173 AGAAAGAGATCCAGTAGTTGATTTCAT 58.453 33.333 5.33 0.00 0.00 2.57
2390 6435 9.823647 GAAAGAGATCCAGTAGTTGATTTCATA 57.176 33.333 5.33 0.00 0.00 2.15
2392 6437 9.995003 AAGAGATCCAGTAGTTGATTTCATATC 57.005 33.333 5.33 0.00 0.00 1.63
2393 6438 9.378504 AGAGATCCAGTAGTTGATTTCATATCT 57.621 33.333 5.33 0.00 0.00 1.98
2394 6439 9.421806 GAGATCCAGTAGTTGATTTCATATCTG 57.578 37.037 0.00 0.00 0.00 2.90
2395 6440 9.152327 AGATCCAGTAGTTGATTTCATATCTGA 57.848 33.333 0.00 0.00 0.00 3.27
2396 6441 9.202273 GATCCAGTAGTTGATTTCATATCTGAC 57.798 37.037 0.00 0.00 0.00 3.51
2397 6442 8.078060 TCCAGTAGTTGATTTCATATCTGACA 57.922 34.615 0.00 0.00 0.00 3.58
2398 6443 8.200120 TCCAGTAGTTGATTTCATATCTGACAG 58.800 37.037 0.00 0.00 0.00 3.51
2399 6444 7.042187 CCAGTAGTTGATTTCATATCTGACAGC 60.042 40.741 0.00 0.00 0.00 4.40
2400 6445 7.710044 CAGTAGTTGATTTCATATCTGACAGCT 59.290 37.037 0.00 0.00 0.00 4.24
2401 6446 6.922247 AGTTGATTTCATATCTGACAGCTG 57.078 37.500 13.48 13.48 0.00 4.24
2402 6447 5.821470 AGTTGATTTCATATCTGACAGCTGG 59.179 40.000 19.93 0.00 0.00 4.85
2403 6448 5.619132 TGATTTCATATCTGACAGCTGGA 57.381 39.130 19.93 6.11 0.00 3.86
2404 6449 5.993055 TGATTTCATATCTGACAGCTGGAA 58.007 37.500 19.93 6.18 0.00 3.53
2405 6450 6.417258 TGATTTCATATCTGACAGCTGGAAA 58.583 36.000 19.93 14.73 0.00 3.13
2406 6451 6.885918 TGATTTCATATCTGACAGCTGGAAAA 59.114 34.615 19.93 3.89 0.00 2.29
2407 6452 7.394077 TGATTTCATATCTGACAGCTGGAAAAA 59.606 33.333 19.93 5.75 0.00 1.94
2408 6453 6.500684 TTCATATCTGACAGCTGGAAAAAC 57.499 37.500 19.93 2.78 0.00 2.43
2409 6454 4.943705 TCATATCTGACAGCTGGAAAAACC 59.056 41.667 19.93 0.00 39.54 3.27
2410 6455 1.593196 TCTGACAGCTGGAAAAACCG 58.407 50.000 19.93 0.00 42.61 4.44
2411 6456 1.140052 TCTGACAGCTGGAAAAACCGA 59.860 47.619 19.93 0.00 42.61 4.69
2412 6457 1.264288 CTGACAGCTGGAAAAACCGAC 59.736 52.381 19.93 0.00 42.61 4.79
2413 6458 1.134220 TGACAGCTGGAAAAACCGACT 60.134 47.619 19.93 0.00 42.61 4.18
2414 6459 1.264288 GACAGCTGGAAAAACCGACTG 59.736 52.381 19.93 0.00 44.54 3.51
2415 6460 1.134220 ACAGCTGGAAAAACCGACTGA 60.134 47.619 19.93 0.00 42.87 3.41
2416 6461 1.264288 CAGCTGGAAAAACCGACTGAC 59.736 52.381 5.57 0.00 42.87 3.51
2417 6462 0.591659 GCTGGAAAAACCGACTGACC 59.408 55.000 0.00 0.00 42.61 4.02
2418 6463 1.235724 CTGGAAAAACCGACTGACCC 58.764 55.000 0.00 0.00 42.61 4.46
2419 6464 0.547075 TGGAAAAACCGACTGACCCA 59.453 50.000 0.00 0.00 42.61 4.51
2420 6465 1.064611 TGGAAAAACCGACTGACCCAA 60.065 47.619 0.00 0.00 42.61 4.12
2421 6466 2.235891 GGAAAAACCGACTGACCCAAT 58.764 47.619 0.00 0.00 0.00 3.16
2422 6467 2.626266 GGAAAAACCGACTGACCCAATT 59.374 45.455 0.00 0.00 0.00 2.32
2423 6468 3.069016 GGAAAAACCGACTGACCCAATTT 59.931 43.478 0.00 0.00 0.00 1.82
2424 6469 4.295870 GAAAAACCGACTGACCCAATTTC 58.704 43.478 0.00 0.00 0.00 2.17
2425 6470 2.951229 AACCGACTGACCCAATTTCT 57.049 45.000 0.00 0.00 0.00 2.52
2426 6471 2.951229 ACCGACTGACCCAATTTCTT 57.049 45.000 0.00 0.00 0.00 2.52
2427 6472 4.360951 AACCGACTGACCCAATTTCTTA 57.639 40.909 0.00 0.00 0.00 2.10
2428 6473 4.360951 ACCGACTGACCCAATTTCTTAA 57.639 40.909 0.00 0.00 0.00 1.85
2429 6474 4.721132 ACCGACTGACCCAATTTCTTAAA 58.279 39.130 0.00 0.00 0.00 1.52
2430 6475 5.134661 ACCGACTGACCCAATTTCTTAAAA 58.865 37.500 0.00 0.00 0.00 1.52
2431 6476 5.595133 ACCGACTGACCCAATTTCTTAAAAA 59.405 36.000 0.00 0.00 0.00 1.94
2455 6500 6.727824 AATACAAGCGAATGACATATAGCC 57.272 37.500 6.21 0.00 0.00 3.93
2456 6501 4.071961 ACAAGCGAATGACATATAGCCA 57.928 40.909 6.21 0.00 0.00 4.75
2457 6502 4.645535 ACAAGCGAATGACATATAGCCAT 58.354 39.130 6.21 0.00 0.00 4.40
2458 6503 5.065914 ACAAGCGAATGACATATAGCCATT 58.934 37.500 6.21 0.00 33.66 3.16
2459 6504 5.180117 ACAAGCGAATGACATATAGCCATTC 59.820 40.000 0.00 0.00 41.43 2.67
2460 6505 4.256920 AGCGAATGACATATAGCCATTCC 58.743 43.478 13.99 9.60 41.67 3.01
2461 6506 3.375299 GCGAATGACATATAGCCATTCCC 59.625 47.826 13.99 6.34 41.67 3.97
2462 6507 4.836825 CGAATGACATATAGCCATTCCCT 58.163 43.478 13.99 0.00 41.67 4.20
2463 6508 5.626809 GCGAATGACATATAGCCATTCCCTA 60.627 44.000 13.99 0.00 41.67 3.53
2464 6509 6.406370 CGAATGACATATAGCCATTCCCTAA 58.594 40.000 13.99 0.00 41.67 2.69
2465 6510 7.050377 CGAATGACATATAGCCATTCCCTAAT 58.950 38.462 13.99 0.00 41.67 1.73
2466 6511 7.554118 CGAATGACATATAGCCATTCCCTAATT 59.446 37.037 13.99 0.00 41.67 1.40
2467 6512 8.585471 AATGACATATAGCCATTCCCTAATTG 57.415 34.615 0.00 0.00 0.00 2.32
2468 6513 6.484288 TGACATATAGCCATTCCCTAATTGG 58.516 40.000 0.00 0.00 0.00 3.16
2469 6514 6.274436 TGACATATAGCCATTCCCTAATTGGA 59.726 38.462 0.00 0.00 38.35 3.53
2470 6515 7.036644 TGACATATAGCCATTCCCTAATTGGAT 60.037 37.037 0.00 0.00 38.35 3.41
2471 6516 7.712537 ACATATAGCCATTCCCTAATTGGATT 58.287 34.615 0.00 0.00 38.35 3.01
2472 6517 7.616935 ACATATAGCCATTCCCTAATTGGATTG 59.383 37.037 0.00 0.00 38.35 2.67
2473 6518 4.541250 AGCCATTCCCTAATTGGATTGA 57.459 40.909 7.82 0.00 37.78 2.57
2474 6519 4.477249 AGCCATTCCCTAATTGGATTGAG 58.523 43.478 7.82 1.94 37.78 3.02
2475 6520 4.168675 AGCCATTCCCTAATTGGATTGAGA 59.831 41.667 7.82 0.00 37.78 3.27
2476 6521 4.279420 GCCATTCCCTAATTGGATTGAGAC 59.721 45.833 7.82 0.00 37.78 3.36
2477 6522 5.699143 CCATTCCCTAATTGGATTGAGACT 58.301 41.667 7.82 0.00 37.78 3.24
2478 6523 5.767168 CCATTCCCTAATTGGATTGAGACTC 59.233 44.000 7.82 0.00 37.78 3.36
2479 6524 4.672587 TCCCTAATTGGATTGAGACTCG 57.327 45.455 0.00 0.00 38.35 4.18
2480 6525 3.388024 TCCCTAATTGGATTGAGACTCGG 59.612 47.826 0.00 0.00 38.35 4.63
2481 6526 3.388024 CCCTAATTGGATTGAGACTCGGA 59.612 47.826 0.00 0.00 38.35 4.55
2482 6527 4.040952 CCCTAATTGGATTGAGACTCGGAT 59.959 45.833 0.00 0.00 38.35 4.18
2483 6528 4.993584 CCTAATTGGATTGAGACTCGGATG 59.006 45.833 0.00 0.00 38.35 3.51
2484 6529 2.315925 TTGGATTGAGACTCGGATGC 57.684 50.000 0.00 1.01 0.00 3.91
2485 6530 1.489481 TGGATTGAGACTCGGATGCT 58.511 50.000 10.17 0.00 0.00 3.79
2486 6531 2.666317 TGGATTGAGACTCGGATGCTA 58.334 47.619 10.17 0.00 0.00 3.49
2487 6532 2.625314 TGGATTGAGACTCGGATGCTAG 59.375 50.000 10.17 0.00 0.00 3.42
2488 6533 2.887783 GGATTGAGACTCGGATGCTAGA 59.112 50.000 0.00 0.00 0.00 2.43
2489 6534 3.319405 GGATTGAGACTCGGATGCTAGAA 59.681 47.826 0.00 0.00 0.00 2.10
2490 6535 3.784701 TTGAGACTCGGATGCTAGAAC 57.215 47.619 0.00 0.00 0.00 3.01
2491 6536 3.006112 TGAGACTCGGATGCTAGAACT 57.994 47.619 0.00 0.00 0.00 3.01
2492 6537 4.152284 TGAGACTCGGATGCTAGAACTA 57.848 45.455 0.00 0.00 0.00 2.24
2493 6538 3.878103 TGAGACTCGGATGCTAGAACTAC 59.122 47.826 0.00 0.00 0.00 2.73
2494 6539 3.878103 GAGACTCGGATGCTAGAACTACA 59.122 47.826 0.00 0.00 0.00 2.74
2495 6540 4.270834 AGACTCGGATGCTAGAACTACAA 58.729 43.478 0.00 0.00 0.00 2.41
2496 6541 4.096682 AGACTCGGATGCTAGAACTACAAC 59.903 45.833 0.00 0.00 0.00 3.32
2497 6542 3.130693 ACTCGGATGCTAGAACTACAACC 59.869 47.826 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.069432 CGACGTTCTCTTCTGACGGAA 60.069 52.381 0.00 0.00 0.00 4.30
6 7 0.516001 CGACGTTCTCTTCTGACGGA 59.484 55.000 0.00 0.00 0.00 4.69
7 8 0.454620 CCGACGTTCTCTTCTGACGG 60.455 60.000 0.00 0.00 0.00 4.79
8 9 0.516001 TCCGACGTTCTCTTCTGACG 59.484 55.000 0.00 0.00 0.00 4.35
9 10 1.266175 TGTCCGACGTTCTCTTCTGAC 59.734 52.381 0.00 0.00 30.84 3.51
10 11 1.601166 TGTCCGACGTTCTCTTCTGA 58.399 50.000 0.00 0.00 0.00 3.27
13 14 2.163010 TGGTATGTCCGACGTTCTCTTC 59.837 50.000 0.00 0.00 39.52 2.87
14 15 2.094854 GTGGTATGTCCGACGTTCTCTT 60.095 50.000 0.00 0.00 39.52 2.85
17 18 0.529378 GGTGGTATGTCCGACGTTCT 59.471 55.000 0.00 0.00 39.52 3.01
18 19 0.529378 AGGTGGTATGTCCGACGTTC 59.471 55.000 0.00 0.00 39.52 3.95
19 20 1.838112 TAGGTGGTATGTCCGACGTT 58.162 50.000 0.00 0.00 39.52 3.99
21 22 1.202336 GGTTAGGTGGTATGTCCGACG 60.202 57.143 0.00 0.00 39.52 5.12
22 23 2.105766 AGGTTAGGTGGTATGTCCGAC 58.894 52.381 0.00 0.00 39.52 4.79
23 24 2.498481 CAAGGTTAGGTGGTATGTCCGA 59.502 50.000 0.00 0.00 39.52 4.55
24 25 2.235402 ACAAGGTTAGGTGGTATGTCCG 59.765 50.000 0.00 0.00 39.52 4.79
25 26 3.994931 ACAAGGTTAGGTGGTATGTCC 57.005 47.619 0.00 0.00 0.00 4.02
27 28 5.309806 AGAGAAACAAGGTTAGGTGGTATGT 59.690 40.000 0.00 0.00 0.00 2.29
28 29 5.643777 CAGAGAAACAAGGTTAGGTGGTATG 59.356 44.000 0.00 0.00 0.00 2.39
29 30 5.309806 ACAGAGAAACAAGGTTAGGTGGTAT 59.690 40.000 0.00 0.00 0.00 2.73
30 31 4.657039 ACAGAGAAACAAGGTTAGGTGGTA 59.343 41.667 0.00 0.00 0.00 3.25
31 32 3.458487 ACAGAGAAACAAGGTTAGGTGGT 59.542 43.478 0.00 0.00 0.00 4.16
32 33 4.086706 ACAGAGAAACAAGGTTAGGTGG 57.913 45.455 0.00 0.00 0.00 4.61
33 34 7.562454 TTTTACAGAGAAACAAGGTTAGGTG 57.438 36.000 0.00 0.00 0.00 4.00
60 61 8.985417 CAATTAATTTGACTTGGAGGGGGTACC 61.985 44.444 2.17 2.17 43.16 3.34
61 62 3.451402 AATTTGACTTGGAGGGGGTAC 57.549 47.619 0.00 0.00 0.00 3.34
62 63 5.806955 ATTAATTTGACTTGGAGGGGGTA 57.193 39.130 0.00 0.00 0.00 3.69
65 66 5.480073 TGACAATTAATTTGACTTGGAGGGG 59.520 40.000 0.00 0.00 38.76 4.79
66 67 6.209391 ACTGACAATTAATTTGACTTGGAGGG 59.791 38.462 0.00 0.00 38.76 4.30
67 68 7.086376 CACTGACAATTAATTTGACTTGGAGG 58.914 38.462 0.00 0.00 38.76 4.30
69 70 7.581213 ACACTGACAATTAATTTGACTTGGA 57.419 32.000 0.00 0.00 38.76 3.53
79 80 7.042456 CGCAGCTTCTATACACTGACAATTAAT 60.042 37.037 0.00 0.00 31.67 1.40
80 81 6.255670 CGCAGCTTCTATACACTGACAATTAA 59.744 38.462 0.00 0.00 31.67 1.40
81 82 5.748630 CGCAGCTTCTATACACTGACAATTA 59.251 40.000 0.00 0.00 31.67 1.40
82 83 4.568359 CGCAGCTTCTATACACTGACAATT 59.432 41.667 0.00 0.00 31.67 2.32
84 85 3.056821 ACGCAGCTTCTATACACTGACAA 60.057 43.478 0.00 0.00 31.67 3.18
87 88 2.752903 TGACGCAGCTTCTATACACTGA 59.247 45.455 0.00 0.00 31.67 3.41
88 89 3.150848 TGACGCAGCTTCTATACACTG 57.849 47.619 0.00 0.00 0.00 3.66
89 90 4.115516 CAATGACGCAGCTTCTATACACT 58.884 43.478 0.00 0.00 0.00 3.55
90 91 3.246226 CCAATGACGCAGCTTCTATACAC 59.754 47.826 0.00 0.00 0.00 2.90
93 94 3.132111 TGTCCAATGACGCAGCTTCTATA 59.868 43.478 0.00 0.00 44.86 1.31
95 96 1.275010 TGTCCAATGACGCAGCTTCTA 59.725 47.619 0.00 0.00 44.86 2.10
96 97 0.035317 TGTCCAATGACGCAGCTTCT 59.965 50.000 0.00 0.00 44.86 2.85
98 99 1.200716 CAATGTCCAATGACGCAGCTT 59.799 47.619 0.00 0.00 44.86 3.74
99 100 0.806868 CAATGTCCAATGACGCAGCT 59.193 50.000 0.00 0.00 44.86 4.24
100 101 0.523072 ACAATGTCCAATGACGCAGC 59.477 50.000 0.00 0.00 44.86 5.25
101 102 1.536766 ACACAATGTCCAATGACGCAG 59.463 47.619 0.00 0.00 44.86 5.18
102 103 1.603456 ACACAATGTCCAATGACGCA 58.397 45.000 0.00 0.00 44.86 5.24
104 105 5.006649 CCACTATACACAATGTCCAATGACG 59.993 44.000 0.00 0.00 44.86 4.35
106 107 6.061022 ACCACTATACACAATGTCCAATGA 57.939 37.500 0.00 0.00 0.00 2.57
107 108 6.554419 CAACCACTATACACAATGTCCAATG 58.446 40.000 0.00 0.00 0.00 2.82
108 109 5.125417 GCAACCACTATACACAATGTCCAAT 59.875 40.000 0.00 0.00 0.00 3.16
109 110 4.457603 GCAACCACTATACACAATGTCCAA 59.542 41.667 0.00 0.00 0.00 3.53
110 111 4.006989 GCAACCACTATACACAATGTCCA 58.993 43.478 0.00 0.00 0.00 4.02
112 113 3.930229 TCGCAACCACTATACACAATGTC 59.070 43.478 0.00 0.00 0.00 3.06
113 114 3.682858 GTCGCAACCACTATACACAATGT 59.317 43.478 0.00 0.00 0.00 2.71
115 116 2.927477 CGTCGCAACCACTATACACAAT 59.073 45.455 0.00 0.00 0.00 2.71
116 117 2.030096 TCGTCGCAACCACTATACACAA 60.030 45.455 0.00 0.00 0.00 3.33
117 118 1.540707 TCGTCGCAACCACTATACACA 59.459 47.619 0.00 0.00 0.00 3.72
118 119 2.267188 TCGTCGCAACCACTATACAC 57.733 50.000 0.00 0.00 0.00 2.90
122 123 6.535865 TGTTAATTAATCGTCGCAACCACTAT 59.464 34.615 0.31 0.00 0.00 2.12
124 125 4.691685 TGTTAATTAATCGTCGCAACCACT 59.308 37.500 0.31 0.00 0.00 4.00
126 127 5.608676 TTGTTAATTAATCGTCGCAACCA 57.391 34.783 0.31 0.00 0.00 3.67
127 128 6.712301 GATTGTTAATTAATCGTCGCAACC 57.288 37.500 0.31 0.00 0.00 3.77
140 141 9.667107 TTTTGATACTCTCTCCGATTGTTAATT 57.333 29.630 0.00 0.00 0.00 1.40
142 143 9.667107 AATTTTGATACTCTCTCCGATTGTTAA 57.333 29.630 0.00 0.00 0.00 2.01
143 144 9.667107 AAATTTTGATACTCTCTCCGATTGTTA 57.333 29.630 0.00 0.00 0.00 2.41
145 146 8.567285 AAAATTTTGATACTCTCTCCGATTGT 57.433 30.769 1.75 0.00 0.00 2.71
146 147 9.495754 GAAAAATTTTGATACTCTCTCCGATTG 57.504 33.333 3.73 0.00 0.00 2.67
147 148 9.454859 AGAAAAATTTTGATACTCTCTCCGATT 57.545 29.630 3.73 0.00 0.00 3.34
149 150 8.848474 AAGAAAAATTTTGATACTCTCTCCGA 57.152 30.769 3.73 0.00 0.00 4.55
166 167 7.615757 CCCCCTGTGATTAGTCTAAAGAAAAAT 59.384 37.037 0.00 0.00 0.00 1.82
167 168 6.946009 CCCCCTGTGATTAGTCTAAAGAAAAA 59.054 38.462 0.00 0.00 0.00 1.94
168 169 6.481643 CCCCCTGTGATTAGTCTAAAGAAAA 58.518 40.000 0.00 0.00 0.00 2.29
169 170 6.062258 CCCCCTGTGATTAGTCTAAAGAAA 57.938 41.667 0.00 0.00 0.00 2.52
170 171 5.693769 CCCCCTGTGATTAGTCTAAAGAA 57.306 43.478 0.00 0.00 0.00 2.52
189 190 6.190587 TGTTACTACTCTAAGTTACTCCCCC 58.809 44.000 0.00 0.00 31.82 5.40
190 191 7.683945 GCATGTTACTACTCTAAGTTACTCCCC 60.684 44.444 0.00 0.00 31.82 4.81
192 193 7.769220 TGCATGTTACTACTCTAAGTTACTCC 58.231 38.462 0.00 0.00 31.82 3.85
222 223 9.581099 CATGACACACACATATGTTACTAGTAA 57.419 33.333 11.38 11.38 36.72 2.24
223 224 7.704899 GCATGACACACACATATGTTACTAGTA 59.295 37.037 5.37 0.00 36.72 1.82
224 225 6.535150 GCATGACACACACATATGTTACTAGT 59.465 38.462 5.37 0.00 36.72 2.57
225 226 6.534793 TGCATGACACACACATATGTTACTAG 59.465 38.462 5.37 0.00 36.72 2.57
226 227 6.402222 TGCATGACACACACATATGTTACTA 58.598 36.000 5.37 0.00 36.72 1.82
227 228 5.244755 TGCATGACACACACATATGTTACT 58.755 37.500 5.37 0.00 36.72 2.24
228 229 5.544136 TGCATGACACACACATATGTTAC 57.456 39.130 5.37 0.00 36.72 2.50
229 230 5.879223 TGATGCATGACACACACATATGTTA 59.121 36.000 2.46 0.00 36.72 2.41
230 231 4.701171 TGATGCATGACACACACATATGTT 59.299 37.500 2.46 0.00 36.72 2.71
231 232 4.095334 GTGATGCATGACACACACATATGT 59.905 41.667 11.72 1.41 40.80 2.29
232 233 4.334481 AGTGATGCATGACACACACATATG 59.666 41.667 18.76 0.00 39.72 1.78
234 235 3.941573 AGTGATGCATGACACACACATA 58.058 40.909 18.76 0.00 39.72 2.29
235 236 2.786777 AGTGATGCATGACACACACAT 58.213 42.857 18.76 0.00 39.72 3.21
236 237 2.259266 AGTGATGCATGACACACACA 57.741 45.000 18.76 0.00 39.72 3.72
237 238 3.631145 AAAGTGATGCATGACACACAC 57.369 42.857 18.76 11.91 39.18 3.82
238 239 5.963176 AATAAAGTGATGCATGACACACA 57.037 34.783 18.76 0.00 39.18 3.72
239 240 8.915871 AATAAATAAAGTGATGCATGACACAC 57.084 30.769 18.76 12.97 39.18 3.82
241 242 9.669353 CCTAATAAATAAAGTGATGCATGACAC 57.331 33.333 18.76 14.04 37.30 3.67
272 273 8.316946 TCACACATATCAAGAAAAGATGAGTCT 58.683 33.333 0.00 0.00 35.82 3.24
273 274 8.484641 TCACACATATCAAGAAAAGATGAGTC 57.515 34.615 0.00 0.00 0.00 3.36
274 275 8.890718 CATCACACATATCAAGAAAAGATGAGT 58.109 33.333 0.00 0.00 32.98 3.41
276 277 8.797350 ACATCACACATATCAAGAAAAGATGA 57.203 30.769 0.00 0.00 34.73 2.92
279 280 9.500785 TGTAACATCACACATATCAAGAAAAGA 57.499 29.630 0.00 0.00 0.00 2.52
283 284 9.936759 TTACTGTAACATCACACATATCAAGAA 57.063 29.630 0.00 0.00 0.00 2.52
284 285 9.366216 GTTACTGTAACATCACACATATCAAGA 57.634 33.333 22.30 0.00 38.52 3.02
285 286 9.371136 AGTTACTGTAACATCACACATATCAAG 57.629 33.333 27.12 0.00 41.07 3.02
288 289 8.969267 GCTAGTTACTGTAACATCACACATATC 58.031 37.037 27.12 5.73 41.07 1.63
289 290 8.696374 AGCTAGTTACTGTAACATCACACATAT 58.304 33.333 27.12 9.43 41.07 1.78
291 292 6.936279 AGCTAGTTACTGTAACATCACACAT 58.064 36.000 27.12 10.64 41.07 3.21
292 293 6.340962 AGCTAGTTACTGTAACATCACACA 57.659 37.500 27.12 7.11 41.07 3.72
293 294 7.974501 ACATAGCTAGTTACTGTAACATCACAC 59.025 37.037 27.12 13.16 41.07 3.82
295 296 8.928270 AACATAGCTAGTTACTGTAACATCAC 57.072 34.615 27.12 15.70 41.07 3.06
344 345 9.407380 AGACAAAATAGATAATGTGGCATGTAA 57.593 29.630 0.00 0.00 0.00 2.41
345 346 8.978874 AGACAAAATAGATAATGTGGCATGTA 57.021 30.769 0.00 0.00 0.00 2.29
346 347 7.886629 AGACAAAATAGATAATGTGGCATGT 57.113 32.000 0.00 0.00 0.00 3.21
366 367 9.337396 GGTGGTATCATCACATTTATTTAGACA 57.663 33.333 0.00 0.00 36.90 3.41
367 368 9.561069 AGGTGGTATCATCACATTTATTTAGAC 57.439 33.333 0.00 0.00 36.90 2.59
371 372 8.796475 GCATAGGTGGTATCATCACATTTATTT 58.204 33.333 0.00 0.00 36.90 1.40
372 373 8.166061 AGCATAGGTGGTATCATCACATTTATT 58.834 33.333 0.00 0.00 36.90 1.40
373 374 7.693132 AGCATAGGTGGTATCATCACATTTAT 58.307 34.615 0.00 0.00 36.90 1.40
374 375 7.078249 AGCATAGGTGGTATCATCACATTTA 57.922 36.000 0.00 0.00 36.90 1.40
375 376 5.945310 AGCATAGGTGGTATCATCACATTT 58.055 37.500 0.00 0.00 36.90 2.32
376 377 5.573380 AGCATAGGTGGTATCATCACATT 57.427 39.130 0.00 0.00 36.90 2.71
377 378 5.782331 AGTAGCATAGGTGGTATCATCACAT 59.218 40.000 0.00 0.00 40.15 3.21
378 379 5.147767 AGTAGCATAGGTGGTATCATCACA 58.852 41.667 0.00 0.00 40.15 3.58
380 381 5.246203 GGAAGTAGCATAGGTGGTATCATCA 59.754 44.000 0.00 0.00 40.15 3.07
382 383 5.012148 GTGGAAGTAGCATAGGTGGTATCAT 59.988 44.000 0.00 0.00 40.15 2.45
383 384 4.344102 GTGGAAGTAGCATAGGTGGTATCA 59.656 45.833 0.00 0.00 40.15 2.15
384 385 4.589374 AGTGGAAGTAGCATAGGTGGTATC 59.411 45.833 0.00 0.00 40.15 2.24
385 386 4.557705 AGTGGAAGTAGCATAGGTGGTAT 58.442 43.478 0.00 0.00 40.15 2.73
386 387 3.990369 AGTGGAAGTAGCATAGGTGGTA 58.010 45.455 0.00 0.00 37.28 3.25
388 389 4.262635 CCATAGTGGAAGTAGCATAGGTGG 60.263 50.000 0.00 0.00 40.96 4.61
389 390 4.262635 CCCATAGTGGAAGTAGCATAGGTG 60.263 50.000 0.00 0.00 40.96 4.00
390 391 3.904339 CCCATAGTGGAAGTAGCATAGGT 59.096 47.826 0.00 0.00 40.96 3.08
391 392 3.904339 ACCCATAGTGGAAGTAGCATAGG 59.096 47.826 0.00 0.00 40.96 2.57
392 393 5.775701 ACTACCCATAGTGGAAGTAGCATAG 59.224 44.000 10.45 0.00 40.96 2.23
393 394 5.712752 ACTACCCATAGTGGAAGTAGCATA 58.287 41.667 10.45 0.00 40.96 3.14
394 395 4.557705 ACTACCCATAGTGGAAGTAGCAT 58.442 43.478 10.45 0.00 40.96 3.79
395 396 3.958798 GACTACCCATAGTGGAAGTAGCA 59.041 47.826 10.45 0.00 41.98 3.49
396 397 4.216708 AGACTACCCATAGTGGAAGTAGC 58.783 47.826 10.45 5.94 41.98 3.58
397 398 7.288560 TCTAAGACTACCCATAGTGGAAGTAG 58.711 42.308 9.47 9.47 41.98 2.57
398 399 7.217028 TCTAAGACTACCCATAGTGGAAGTA 57.783 40.000 0.00 0.00 41.98 2.24
399 400 6.088541 TCTAAGACTACCCATAGTGGAAGT 57.911 41.667 0.00 0.98 41.98 3.01
400 401 6.834451 TCTTCTAAGACTACCCATAGTGGAAG 59.166 42.308 0.00 0.00 41.98 3.46
401 402 6.738635 TCTTCTAAGACTACCCATAGTGGAA 58.261 40.000 0.00 0.00 41.98 3.53
402 403 6.337185 TCTTCTAAGACTACCCATAGTGGA 57.663 41.667 0.00 0.00 41.98 4.02
403 404 6.608002 AGTTCTTCTAAGACTACCCATAGTGG 59.392 42.308 0.00 0.00 41.98 4.00
404 405 7.648039 AGTTCTTCTAAGACTACCCATAGTG 57.352 40.000 0.00 0.00 41.98 2.74
405 406 9.765295 TTTAGTTCTTCTAAGACTACCCATAGT 57.235 33.333 0.00 0.00 39.42 2.12
407 408 8.680903 CGTTTAGTTCTTCTAAGACTACCCATA 58.319 37.037 0.00 0.00 39.42 2.74
408 409 7.178097 ACGTTTAGTTCTTCTAAGACTACCCAT 59.822 37.037 0.00 0.00 39.42 4.00
409 410 6.491403 ACGTTTAGTTCTTCTAAGACTACCCA 59.509 38.462 0.00 0.00 39.42 4.51
410 411 6.918626 ACGTTTAGTTCTTCTAAGACTACCC 58.081 40.000 0.00 0.00 39.42 3.69
411 412 7.965655 GGTACGTTTAGTTCTTCTAAGACTACC 59.034 40.741 0.00 0.00 39.42 3.18
412 413 8.507249 TGGTACGTTTAGTTCTTCTAAGACTAC 58.493 37.037 0.00 0.00 39.42 2.73
413 414 8.621532 TGGTACGTTTAGTTCTTCTAAGACTA 57.378 34.615 0.00 0.00 39.42 2.59
414 415 7.516198 TGGTACGTTTAGTTCTTCTAAGACT 57.484 36.000 0.00 0.00 39.42 3.24
415 416 8.483218 GTTTGGTACGTTTAGTTCTTCTAAGAC 58.517 37.037 0.00 0.00 39.42 3.01
416 417 8.416329 AGTTTGGTACGTTTAGTTCTTCTAAGA 58.584 33.333 0.00 0.00 39.42 2.10
418 419 8.416329 AGAGTTTGGTACGTTTAGTTCTTCTAA 58.584 33.333 0.00 0.00 36.91 2.10
419 420 7.945134 AGAGTTTGGTACGTTTAGTTCTTCTA 58.055 34.615 0.00 0.00 0.00 2.10
420 421 6.814043 AGAGTTTGGTACGTTTAGTTCTTCT 58.186 36.000 0.00 0.00 0.00 2.85
421 422 7.474398 AAGAGTTTGGTACGTTTAGTTCTTC 57.526 36.000 0.00 0.00 0.00 2.87
422 423 7.854557 AAAGAGTTTGGTACGTTTAGTTCTT 57.145 32.000 0.00 0.00 0.00 2.52
423 424 7.854557 AAAAGAGTTTGGTACGTTTAGTTCT 57.145 32.000 0.00 0.00 0.00 3.01
426 427 6.313658 ACGAAAAAGAGTTTGGTACGTTTAGT 59.686 34.615 0.00 0.00 0.00 2.24
428 429 6.660887 ACGAAAAAGAGTTTGGTACGTTTA 57.339 33.333 0.00 0.00 0.00 2.01
449 450 5.059221 GGTACATTTTGAATTCGCAGAAACG 59.941 40.000 0.04 0.00 45.90 3.60
450 451 5.918011 TGGTACATTTTGAATTCGCAGAAAC 59.082 36.000 0.04 0.00 45.90 2.78
468 469 5.695816 GGTGTTCGTATACAAGTTTGGTACA 59.304 40.000 3.32 0.00 0.00 2.90
498 499 1.320507 TCACACCACGTACTACTGCA 58.679 50.000 0.00 0.00 0.00 4.41
528 530 3.976942 CCACACGTACACACAACTAGTAC 59.023 47.826 0.00 0.00 35.85 2.73
531 533 1.790623 GCCACACGTACACACAACTAG 59.209 52.381 0.00 0.00 0.00 2.57
533 535 1.149361 CGCCACACGTACACACAACT 61.149 55.000 0.00 0.00 36.87 3.16
535 537 3.707440 CGCCACACGTACACACAA 58.293 55.556 0.00 0.00 36.87 3.33
586 588 6.385649 AACGTTCTAGAATCTGAGAGGATC 57.614 41.667 8.75 0.00 0.00 3.36
592 594 5.336744 GTCTGGAACGTTCTAGAATCTGAG 58.663 45.833 36.35 14.68 44.71 3.35
623 625 2.355837 GGCGCGTGAGAGTGACAA 60.356 61.111 8.43 0.00 0.00 3.18
630 632 4.717629 CTTGGACGGCGCGTGAGA 62.718 66.667 6.90 0.00 41.37 3.27
647 649 2.125350 CCTCTGCTTGGCTCGGAC 60.125 66.667 0.00 0.00 0.00 4.79
767 4583 1.141881 GTGACGCATGGGATCGAGT 59.858 57.895 17.76 0.00 0.00 4.18
794 4639 4.794439 CTCGATGCCACCGCGACA 62.794 66.667 8.23 0.00 38.08 4.35
809 4654 1.826385 CTTGTGTGGACCAATCCCTC 58.174 55.000 0.00 0.00 45.59 4.30
812 4657 0.598065 GTGCTTGTGTGGACCAATCC 59.402 55.000 0.00 0.00 46.48 3.01
885 4769 4.235360 CGGCCGCAGTTATATATATAGGC 58.765 47.826 14.67 16.38 41.14 3.93
904 4788 4.785453 CTGTGGGAAGGAGGCGGC 62.785 72.222 0.00 0.00 0.00 6.53
905 4789 3.003173 TCTGTGGGAAGGAGGCGG 61.003 66.667 0.00 0.00 0.00 6.13
906 4790 2.266055 GTCTGTGGGAAGGAGGCG 59.734 66.667 0.00 0.00 0.00 5.52
907 4791 1.779061 TTGGTCTGTGGGAAGGAGGC 61.779 60.000 0.00 0.00 0.00 4.70
908 4792 0.036875 GTTGGTCTGTGGGAAGGAGG 59.963 60.000 0.00 0.00 0.00 4.30
911 4809 1.318576 GTTGTTGGTCTGTGGGAAGG 58.681 55.000 0.00 0.00 0.00 3.46
948 4898 2.409870 GGAGCCGCCTGTGGATTTG 61.410 63.158 0.00 0.00 0.00 2.32
980 4930 1.209261 TGGATGGATTTGCTGCTCGTA 59.791 47.619 0.00 0.00 0.00 3.43
1019 4978 4.824515 CCTCCTCCTCCCTCGCGT 62.825 72.222 5.77 0.00 0.00 6.01
1062 5024 2.783935 GACGTCGAGGAGTCCGTC 59.216 66.667 12.85 10.11 42.22 4.79
1188 5174 3.332493 GAGCGCCTGGAACGTCGTA 62.332 63.158 2.29 0.00 0.00 3.43
1384 5382 2.188994 GCTGAGCGCCATCTCCTT 59.811 61.111 2.29 0.00 32.22 3.36
1523 5548 2.287427 ACACTCTGTACAAGGTCGAACG 60.287 50.000 0.00 0.00 0.00 3.95
1544 5577 7.209471 ACAGAAACGCTAATCACCAAAAATA 57.791 32.000 0.00 0.00 0.00 1.40
1582 5617 3.788672 GGACCGATCCAAAGCAGAT 57.211 52.632 0.00 0.00 45.47 2.90
1605 5640 6.592607 TGTAAATCTCCAGTCAATCGGTTAAC 59.407 38.462 0.00 0.00 0.00 2.01
1685 5724 6.091123 GCAAGAATCTGTCAATTGCATTTC 57.909 37.500 0.00 8.48 44.32 2.17
1713 5752 6.540189 ACAGCATAGTCATAGAACAACAATCC 59.460 38.462 0.00 0.00 0.00 3.01
1745 5784 8.758715 GCTTGAAATTATGATAAACAATGGAGC 58.241 33.333 0.00 0.00 0.00 4.70
1747 5786 8.980596 AGGCTTGAAATTATGATAAACAATGGA 58.019 29.630 0.00 0.00 0.00 3.41
1759 5798 5.059404 ACAAACCGAGGCTTGAAATTATG 57.941 39.130 11.74 0.00 0.00 1.90
1764 5803 3.547746 AGTTACAAACCGAGGCTTGAAA 58.452 40.909 11.74 0.00 0.00 2.69
1766 5805 2.922740 AGTTACAAACCGAGGCTTGA 57.077 45.000 11.74 0.00 0.00 3.02
1775 5820 6.861065 TGAGACAATCTGAAGTTACAAACC 57.139 37.500 0.00 0.00 0.00 3.27
1787 5832 5.936686 ACTGTCAATGTTGAGACAATCTG 57.063 39.130 0.00 0.00 43.48 2.90
1792 5837 5.017294 TGTGTACTGTCAATGTTGAGACA 57.983 39.130 0.00 0.00 42.06 3.41
1799 5844 4.569943 GGACATCTGTGTACTGTCAATGT 58.430 43.478 12.60 7.54 40.80 2.71
1810 5855 5.871396 ATTAATACTCCGGACATCTGTGT 57.129 39.130 0.00 0.00 42.49 3.72
1811 5856 5.466728 CCAATTAATACTCCGGACATCTGTG 59.533 44.000 0.00 0.00 0.00 3.66
1812 5857 5.365605 TCCAATTAATACTCCGGACATCTGT 59.634 40.000 0.00 0.00 0.00 3.41
1821 5866 7.604164 AGCTATTGTGATCCAATTAATACTCCG 59.396 37.037 12.69 0.00 41.01 4.63
1834 5879 5.675538 ACTGACCTTTAGCTATTGTGATCC 58.324 41.667 0.00 0.00 0.00 3.36
1838 5883 5.934625 AGTTGACTGACCTTTAGCTATTGTG 59.065 40.000 0.00 0.00 0.00 3.33
1839 5884 5.934625 CAGTTGACTGACCTTTAGCTATTGT 59.065 40.000 5.19 0.00 46.59 2.71
1840 5885 6.414408 CAGTTGACTGACCTTTAGCTATTG 57.586 41.667 5.19 0.00 46.59 1.90
1854 5899 5.697633 CCCAAATCCAAAAATCAGTTGACTG 59.302 40.000 4.77 4.77 45.08 3.51
1855 5900 5.742838 GCCCAAATCCAAAAATCAGTTGACT 60.743 40.000 0.00 0.00 0.00 3.41
1856 5901 4.452114 GCCCAAATCCAAAAATCAGTTGAC 59.548 41.667 0.00 0.00 0.00 3.18
1857 5902 4.504689 GGCCCAAATCCAAAAATCAGTTGA 60.505 41.667 0.00 0.00 0.00 3.18
1858 5903 3.752747 GGCCCAAATCCAAAAATCAGTTG 59.247 43.478 0.00 0.00 0.00 3.16
1859 5904 3.556843 CGGCCCAAATCCAAAAATCAGTT 60.557 43.478 0.00 0.00 0.00 3.16
1860 5905 2.028203 CGGCCCAAATCCAAAAATCAGT 60.028 45.455 0.00 0.00 0.00 3.41
1861 5906 2.620242 CGGCCCAAATCCAAAAATCAG 58.380 47.619 0.00 0.00 0.00 2.90
1862 5907 1.277557 CCGGCCCAAATCCAAAAATCA 59.722 47.619 0.00 0.00 0.00 2.57
1863 5908 1.277842 ACCGGCCCAAATCCAAAAATC 59.722 47.619 0.00 0.00 0.00 2.17
1864 5909 1.277842 GACCGGCCCAAATCCAAAAAT 59.722 47.619 0.00 0.00 0.00 1.82
1865 5910 0.682292 GACCGGCCCAAATCCAAAAA 59.318 50.000 0.00 0.00 0.00 1.94
1866 5911 1.188871 GGACCGGCCCAAATCCAAAA 61.189 55.000 0.00 0.00 0.00 2.44
1867 5912 1.608046 GGACCGGCCCAAATCCAAA 60.608 57.895 0.00 0.00 0.00 3.28
1868 5913 2.036572 GGACCGGCCCAAATCCAA 59.963 61.111 0.00 0.00 0.00 3.53
1869 5914 2.161713 AATGGACCGGCCCAAATCCA 62.162 55.000 15.61 13.09 45.12 3.41
1870 5915 0.975556 AAATGGACCGGCCCAAATCC 60.976 55.000 15.61 6.58 40.04 3.01
1871 5916 0.901827 AAAATGGACCGGCCCAAATC 59.098 50.000 15.61 0.00 40.04 2.17
1872 5917 0.612744 CAAAATGGACCGGCCCAAAT 59.387 50.000 15.61 2.51 40.04 2.32
1873 5918 0.470080 TCAAAATGGACCGGCCCAAA 60.470 50.000 15.61 0.00 40.04 3.28
1874 5919 0.897863 CTCAAAATGGACCGGCCCAA 60.898 55.000 15.61 0.00 40.04 4.12
1875 5920 1.304052 CTCAAAATGGACCGGCCCA 60.304 57.895 13.59 13.59 41.05 5.36
1876 5921 0.610785 TTCTCAAAATGGACCGGCCC 60.611 55.000 0.00 0.00 34.97 5.80
1877 5922 0.811281 CTTCTCAAAATGGACCGGCC 59.189 55.000 0.00 4.32 37.10 6.13
1878 5923 1.821216 TCTTCTCAAAATGGACCGGC 58.179 50.000 0.00 0.00 0.00 6.13
2171 6216 1.338674 TGCCTCGTTGATGATCCGTTT 60.339 47.619 0.00 0.00 0.00 3.60
2172 6217 0.249120 TGCCTCGTTGATGATCCGTT 59.751 50.000 0.00 0.00 0.00 4.44
2173 6218 0.249120 TTGCCTCGTTGATGATCCGT 59.751 50.000 0.00 0.00 0.00 4.69
2174 6219 0.933097 CTTGCCTCGTTGATGATCCG 59.067 55.000 0.00 0.00 0.00 4.18
2175 6220 2.208431 CTCTTGCCTCGTTGATGATCC 58.792 52.381 0.00 0.00 0.00 3.36
2176 6221 2.208431 CCTCTTGCCTCGTTGATGATC 58.792 52.381 0.00 0.00 0.00 2.92
2177 6222 1.134280 CCCTCTTGCCTCGTTGATGAT 60.134 52.381 0.00 0.00 0.00 2.45
2178 6223 0.250234 CCCTCTTGCCTCGTTGATGA 59.750 55.000 0.00 0.00 0.00 2.92
2179 6224 0.250234 TCCCTCTTGCCTCGTTGATG 59.750 55.000 0.00 0.00 0.00 3.07
2180 6225 1.134280 CATCCCTCTTGCCTCGTTGAT 60.134 52.381 0.00 0.00 0.00 2.57
2181 6226 0.250234 CATCCCTCTTGCCTCGTTGA 59.750 55.000 0.00 0.00 0.00 3.18
2182 6227 0.745845 CCATCCCTCTTGCCTCGTTG 60.746 60.000 0.00 0.00 0.00 4.10
2183 6228 1.201429 ACCATCCCTCTTGCCTCGTT 61.201 55.000 0.00 0.00 0.00 3.85
2184 6229 1.613630 ACCATCCCTCTTGCCTCGT 60.614 57.895 0.00 0.00 0.00 4.18
2185 6230 1.144936 GACCATCCCTCTTGCCTCG 59.855 63.158 0.00 0.00 0.00 4.63
2186 6231 1.144936 CGACCATCCCTCTTGCCTC 59.855 63.158 0.00 0.00 0.00 4.70
2187 6232 2.370445 CCGACCATCCCTCTTGCCT 61.370 63.158 0.00 0.00 0.00 4.75
2188 6233 2.190578 CCGACCATCCCTCTTGCC 59.809 66.667 0.00 0.00 0.00 4.52
2189 6234 2.190578 CCCGACCATCCCTCTTGC 59.809 66.667 0.00 0.00 0.00 4.01
2190 6235 2.746375 CCCCCGACCATCCCTCTTG 61.746 68.421 0.00 0.00 0.00 3.02
2191 6236 2.366972 CCCCCGACCATCCCTCTT 60.367 66.667 0.00 0.00 0.00 2.85
2193 6238 3.768833 TAGCCCCCGACCATCCCTC 62.769 68.421 0.00 0.00 0.00 4.30
2194 6239 3.774336 TAGCCCCCGACCATCCCT 61.774 66.667 0.00 0.00 0.00 4.20
2195 6240 3.242291 CTAGCCCCCGACCATCCC 61.242 72.222 0.00 0.00 0.00 3.85
2196 6241 3.242291 CCTAGCCCCCGACCATCC 61.242 72.222 0.00 0.00 0.00 3.51
2197 6242 3.242291 CCCTAGCCCCCGACCATC 61.242 72.222 0.00 0.00 0.00 3.51
2209 6254 4.087892 ACCGCTGTGCTGCCCTAG 62.088 66.667 0.00 0.00 0.00 3.02
2210 6255 4.393155 CACCGCTGTGCTGCCCTA 62.393 66.667 0.00 0.00 35.31 3.53
2232 6277 2.223464 TATTGCCCTCCCCCAACTGC 62.223 60.000 0.00 0.00 0.00 4.40
2233 6278 0.395724 GTATTGCCCTCCCCCAACTG 60.396 60.000 0.00 0.00 0.00 3.16
2234 6279 0.849094 TGTATTGCCCTCCCCCAACT 60.849 55.000 0.00 0.00 0.00 3.16
2235 6280 0.395724 CTGTATTGCCCTCCCCCAAC 60.396 60.000 0.00 0.00 0.00 3.77
2236 6281 2.006748 CTGTATTGCCCTCCCCCAA 58.993 57.895 0.00 0.00 0.00 4.12
2237 6282 2.689691 GCTGTATTGCCCTCCCCCA 61.690 63.158 0.00 0.00 0.00 4.96
2238 6283 2.195956 GCTGTATTGCCCTCCCCC 59.804 66.667 0.00 0.00 0.00 5.40
2239 6284 0.753111 CTTGCTGTATTGCCCTCCCC 60.753 60.000 0.00 0.00 0.00 4.81
2240 6285 0.753111 CCTTGCTGTATTGCCCTCCC 60.753 60.000 0.00 0.00 0.00 4.30
2241 6286 1.387295 GCCTTGCTGTATTGCCCTCC 61.387 60.000 0.00 0.00 0.00 4.30
2242 6287 0.394899 AGCCTTGCTGTATTGCCCTC 60.395 55.000 0.00 0.00 37.57 4.30
2243 6288 1.693640 AGCCTTGCTGTATTGCCCT 59.306 52.632 0.00 0.00 37.57 5.19
2244 6289 4.344237 AGCCTTGCTGTATTGCCC 57.656 55.556 0.00 0.00 37.57 5.36
2255 6300 3.726517 CGTTCCCGTGCAGCCTTG 61.727 66.667 0.00 0.00 0.00 3.61
2289 6334 4.593864 CTAGCCGCCTCCTTCCGC 62.594 72.222 0.00 0.00 0.00 5.54
2290 6335 3.917760 CCTAGCCGCCTCCTTCCG 61.918 72.222 0.00 0.00 0.00 4.30
2291 6336 4.243008 GCCTAGCCGCCTCCTTCC 62.243 72.222 0.00 0.00 0.00 3.46
2292 6337 4.243008 GGCCTAGCCGCCTCCTTC 62.243 72.222 0.00 0.00 46.10 3.46
2315 6360 2.742372 CTTCGAACTGCCCCACCG 60.742 66.667 0.00 0.00 0.00 4.94
2316 6361 2.359975 CCTTCGAACTGCCCCACC 60.360 66.667 0.00 0.00 0.00 4.61
2317 6362 0.955919 CTTCCTTCGAACTGCCCCAC 60.956 60.000 0.00 0.00 0.00 4.61
2318 6363 1.125093 TCTTCCTTCGAACTGCCCCA 61.125 55.000 0.00 0.00 0.00 4.96
2319 6364 0.036306 TTCTTCCTTCGAACTGCCCC 59.964 55.000 0.00 0.00 0.00 5.80
2320 6365 1.002087 TCTTCTTCCTTCGAACTGCCC 59.998 52.381 0.00 0.00 0.00 5.36
2321 6366 2.457366 TCTTCTTCCTTCGAACTGCC 57.543 50.000 0.00 0.00 0.00 4.85
2322 6367 4.813296 TTTTCTTCTTCCTTCGAACTGC 57.187 40.909 0.00 0.00 0.00 4.40
2323 6368 6.145535 CCATTTTTCTTCTTCCTTCGAACTG 58.854 40.000 0.00 0.00 0.00 3.16
2324 6369 5.278512 GCCATTTTTCTTCTTCCTTCGAACT 60.279 40.000 0.00 0.00 0.00 3.01
2325 6370 4.917998 GCCATTTTTCTTCTTCCTTCGAAC 59.082 41.667 0.00 0.00 0.00 3.95
2326 6371 4.022329 GGCCATTTTTCTTCTTCCTTCGAA 60.022 41.667 0.00 0.00 0.00 3.71
2327 6372 3.506067 GGCCATTTTTCTTCTTCCTTCGA 59.494 43.478 0.00 0.00 0.00 3.71
2328 6373 3.255642 TGGCCATTTTTCTTCTTCCTTCG 59.744 43.478 0.00 0.00 0.00 3.79
2329 6374 4.814147 CTGGCCATTTTTCTTCTTCCTTC 58.186 43.478 5.51 0.00 0.00 3.46
2330 6375 3.007290 GCTGGCCATTTTTCTTCTTCCTT 59.993 43.478 5.51 0.00 0.00 3.36
2331 6376 2.564504 GCTGGCCATTTTTCTTCTTCCT 59.435 45.455 5.51 0.00 0.00 3.36
2332 6377 2.672195 CGCTGGCCATTTTTCTTCTTCC 60.672 50.000 5.51 0.00 0.00 3.46
2333 6378 2.599659 CGCTGGCCATTTTTCTTCTTC 58.400 47.619 5.51 0.00 0.00 2.87
2334 6379 1.273327 CCGCTGGCCATTTTTCTTCTT 59.727 47.619 5.51 0.00 0.00 2.52
2335 6380 0.890683 CCGCTGGCCATTTTTCTTCT 59.109 50.000 5.51 0.00 0.00 2.85
2336 6381 0.108662 CCCGCTGGCCATTTTTCTTC 60.109 55.000 5.51 0.00 0.00 2.87
2337 6382 0.541764 TCCCGCTGGCCATTTTTCTT 60.542 50.000 5.51 0.00 0.00 2.52
2338 6383 0.967380 CTCCCGCTGGCCATTTTTCT 60.967 55.000 5.51 0.00 0.00 2.52
2339 6384 1.512694 CTCCCGCTGGCCATTTTTC 59.487 57.895 5.51 0.00 0.00 2.29
2340 6385 1.984026 CCTCCCGCTGGCCATTTTT 60.984 57.895 5.51 0.00 0.00 1.94
2341 6386 2.362889 CCTCCCGCTGGCCATTTT 60.363 61.111 5.51 0.00 0.00 1.82
2342 6387 2.439553 TTTCCTCCCGCTGGCCATTT 62.440 55.000 5.51 0.00 0.00 2.32
2343 6388 2.439553 TTTTCCTCCCGCTGGCCATT 62.440 55.000 5.51 0.00 0.00 3.16
2344 6389 2.439553 TTTTTCCTCCCGCTGGCCAT 62.440 55.000 5.51 0.00 0.00 4.40
2345 6390 3.140073 TTTTTCCTCCCGCTGGCCA 62.140 57.895 4.71 4.71 0.00 5.36
2346 6391 2.282887 TTTTTCCTCCCGCTGGCC 60.283 61.111 0.00 0.00 0.00 5.36
2347 6392 0.893727 TTCTTTTTCCTCCCGCTGGC 60.894 55.000 0.00 0.00 0.00 4.85
2348 6393 1.541588 CTTTCTTTTTCCTCCCGCTGG 59.458 52.381 0.00 0.00 0.00 4.85
2349 6394 2.485814 CTCTTTCTTTTTCCTCCCGCTG 59.514 50.000 0.00 0.00 0.00 5.18
2350 6395 2.372172 TCTCTTTCTTTTTCCTCCCGCT 59.628 45.455 0.00 0.00 0.00 5.52
2351 6396 2.779506 TCTCTTTCTTTTTCCTCCCGC 58.220 47.619 0.00 0.00 0.00 6.13
2352 6397 3.942115 GGATCTCTTTCTTTTTCCTCCCG 59.058 47.826 0.00 0.00 0.00 5.14
2353 6398 4.923415 TGGATCTCTTTCTTTTTCCTCCC 58.077 43.478 0.00 0.00 0.00 4.30
2354 6399 5.565509 ACTGGATCTCTTTCTTTTTCCTCC 58.434 41.667 0.00 0.00 0.00 4.30
2355 6400 7.390823 ACTACTGGATCTCTTTCTTTTTCCTC 58.609 38.462 0.00 0.00 0.00 3.71
2356 6401 7.323052 ACTACTGGATCTCTTTCTTTTTCCT 57.677 36.000 0.00 0.00 0.00 3.36
2357 6402 7.661847 TCAACTACTGGATCTCTTTCTTTTTCC 59.338 37.037 0.00 0.00 0.00 3.13
2358 6403 8.608844 TCAACTACTGGATCTCTTTCTTTTTC 57.391 34.615 0.00 0.00 0.00 2.29
2359 6404 9.579932 AATCAACTACTGGATCTCTTTCTTTTT 57.420 29.630 0.00 0.00 0.00 1.94
2360 6405 9.579932 AAATCAACTACTGGATCTCTTTCTTTT 57.420 29.630 0.00 0.00 0.00 2.27
2361 6406 9.225436 GAAATCAACTACTGGATCTCTTTCTTT 57.775 33.333 0.00 0.00 0.00 2.52
2362 6407 8.378565 TGAAATCAACTACTGGATCTCTTTCTT 58.621 33.333 0.00 0.00 0.00 2.52
2363 6408 7.911651 TGAAATCAACTACTGGATCTCTTTCT 58.088 34.615 0.00 0.00 0.00 2.52
2364 6409 8.729805 ATGAAATCAACTACTGGATCTCTTTC 57.270 34.615 0.00 0.00 0.00 2.62
2366 6411 9.995003 GATATGAAATCAACTACTGGATCTCTT 57.005 33.333 0.00 0.00 0.00 2.85
2367 6412 9.378504 AGATATGAAATCAACTACTGGATCTCT 57.621 33.333 0.00 0.00 0.00 3.10
2368 6413 9.421806 CAGATATGAAATCAACTACTGGATCTC 57.578 37.037 0.00 0.00 0.00 2.75
2369 6414 9.152327 TCAGATATGAAATCAACTACTGGATCT 57.848 33.333 0.00 0.00 0.00 2.75
2370 6415 9.202273 GTCAGATATGAAATCAACTACTGGATC 57.798 37.037 0.00 0.00 0.00 3.36
2371 6416 8.708378 TGTCAGATATGAAATCAACTACTGGAT 58.292 33.333 0.00 0.00 0.00 3.41
2372 6417 8.078060 TGTCAGATATGAAATCAACTACTGGA 57.922 34.615 0.00 0.00 0.00 3.86
2373 6418 7.042187 GCTGTCAGATATGAAATCAACTACTGG 60.042 40.741 3.32 0.00 0.00 4.00
2374 6419 7.710044 AGCTGTCAGATATGAAATCAACTACTG 59.290 37.037 3.32 0.00 0.00 2.74
2375 6420 7.710044 CAGCTGTCAGATATGAAATCAACTACT 59.290 37.037 5.25 0.00 0.00 2.57
2376 6421 7.042187 CCAGCTGTCAGATATGAAATCAACTAC 60.042 40.741 13.81 0.00 0.00 2.73
2377 6422 6.988580 CCAGCTGTCAGATATGAAATCAACTA 59.011 38.462 13.81 0.00 0.00 2.24
2378 6423 5.821470 CCAGCTGTCAGATATGAAATCAACT 59.179 40.000 13.81 0.00 0.00 3.16
2379 6424 5.819379 TCCAGCTGTCAGATATGAAATCAAC 59.181 40.000 13.81 0.00 0.00 3.18
2380 6425 5.993055 TCCAGCTGTCAGATATGAAATCAA 58.007 37.500 13.81 0.00 0.00 2.57
2381 6426 5.619132 TCCAGCTGTCAGATATGAAATCA 57.381 39.130 13.81 0.00 0.00 2.57
2382 6427 6.932356 TTTCCAGCTGTCAGATATGAAATC 57.068 37.500 13.81 0.00 0.00 2.17
2383 6428 7.363268 GGTTTTTCCAGCTGTCAGATATGAAAT 60.363 37.037 13.81 0.00 35.97 2.17
2384 6429 6.071952 GGTTTTTCCAGCTGTCAGATATGAAA 60.072 38.462 13.81 9.43 35.97 2.69
2385 6430 5.415701 GGTTTTTCCAGCTGTCAGATATGAA 59.584 40.000 13.81 3.31 35.97 2.57
2386 6431 4.943705 GGTTTTTCCAGCTGTCAGATATGA 59.056 41.667 13.81 0.00 35.97 2.15
2387 6432 4.201851 CGGTTTTTCCAGCTGTCAGATATG 60.202 45.833 13.81 0.00 35.57 1.78
2388 6433 3.941483 CGGTTTTTCCAGCTGTCAGATAT 59.059 43.478 13.81 0.00 35.57 1.63
2389 6434 3.007506 TCGGTTTTTCCAGCTGTCAGATA 59.992 43.478 13.81 0.00 35.57 1.98
2390 6435 2.154462 CGGTTTTTCCAGCTGTCAGAT 58.846 47.619 13.81 0.00 35.57 2.90
2391 6436 1.140052 TCGGTTTTTCCAGCTGTCAGA 59.860 47.619 13.81 0.00 35.57 3.27
2392 6437 1.264288 GTCGGTTTTTCCAGCTGTCAG 59.736 52.381 13.81 0.00 35.57 3.51
2393 6438 1.134220 AGTCGGTTTTTCCAGCTGTCA 60.134 47.619 13.81 0.00 35.57 3.58
2394 6439 1.264288 CAGTCGGTTTTTCCAGCTGTC 59.736 52.381 13.81 0.00 34.86 3.51
2395 6440 1.134220 TCAGTCGGTTTTTCCAGCTGT 60.134 47.619 13.81 0.00 38.16 4.40
2396 6441 1.264288 GTCAGTCGGTTTTTCCAGCTG 59.736 52.381 6.78 6.78 38.26 4.24
2397 6442 1.594331 GTCAGTCGGTTTTTCCAGCT 58.406 50.000 0.00 0.00 35.57 4.24
2398 6443 0.591659 GGTCAGTCGGTTTTTCCAGC 59.408 55.000 0.00 0.00 35.57 4.85
2399 6444 1.235724 GGGTCAGTCGGTTTTTCCAG 58.764 55.000 0.00 0.00 35.57 3.86
2400 6445 0.547075 TGGGTCAGTCGGTTTTTCCA 59.453 50.000 0.00 0.00 35.57 3.53
2401 6446 1.682740 TTGGGTCAGTCGGTTTTTCC 58.317 50.000 0.00 0.00 0.00 3.13
2402 6447 4.037565 AGAAATTGGGTCAGTCGGTTTTTC 59.962 41.667 0.00 0.00 0.00 2.29
2403 6448 3.958147 AGAAATTGGGTCAGTCGGTTTTT 59.042 39.130 0.00 0.00 0.00 1.94
2404 6449 3.562182 AGAAATTGGGTCAGTCGGTTTT 58.438 40.909 0.00 0.00 0.00 2.43
2405 6450 3.223674 AGAAATTGGGTCAGTCGGTTT 57.776 42.857 0.00 0.00 0.00 3.27
2406 6451 2.951229 AGAAATTGGGTCAGTCGGTT 57.049 45.000 0.00 0.00 0.00 4.44
2407 6452 2.951229 AAGAAATTGGGTCAGTCGGT 57.049 45.000 0.00 0.00 0.00 4.69
2408 6453 5.699097 TTTTAAGAAATTGGGTCAGTCGG 57.301 39.130 0.00 0.00 0.00 4.79
2429 6474 8.076178 GGCTATATGTCATTCGCTTGTATTTTT 58.924 33.333 0.00 0.00 0.00 1.94
2430 6475 7.228507 TGGCTATATGTCATTCGCTTGTATTTT 59.771 33.333 0.00 0.00 0.00 1.82
2431 6476 6.710295 TGGCTATATGTCATTCGCTTGTATTT 59.290 34.615 0.00 0.00 0.00 1.40
2432 6477 6.230472 TGGCTATATGTCATTCGCTTGTATT 58.770 36.000 0.00 0.00 0.00 1.89
2433 6478 5.793817 TGGCTATATGTCATTCGCTTGTAT 58.206 37.500 0.00 0.00 0.00 2.29
2434 6479 5.208463 TGGCTATATGTCATTCGCTTGTA 57.792 39.130 0.00 0.00 0.00 2.41
2435 6480 4.071961 TGGCTATATGTCATTCGCTTGT 57.928 40.909 0.00 0.00 0.00 3.16
2436 6481 5.618056 AATGGCTATATGTCATTCGCTTG 57.382 39.130 0.00 0.00 46.94 4.01
2443 6488 7.036644 TCCAATTAGGGAATGGCTATATGTCAT 60.037 37.037 0.00 0.00 39.50 3.06
2444 6489 6.274436 TCCAATTAGGGAATGGCTATATGTCA 59.726 38.462 0.00 0.00 38.24 3.58
2445 6490 6.721318 TCCAATTAGGGAATGGCTATATGTC 58.279 40.000 0.00 0.00 38.24 3.06
2446 6491 6.718593 TCCAATTAGGGAATGGCTATATGT 57.281 37.500 0.00 0.00 38.24 2.29
2447 6492 7.835682 TCAATCCAATTAGGGAATGGCTATATG 59.164 37.037 0.00 0.00 41.12 1.78
2448 6493 7.943076 TCAATCCAATTAGGGAATGGCTATAT 58.057 34.615 0.00 0.00 41.12 0.86
2449 6494 7.239563 TCTCAATCCAATTAGGGAATGGCTATA 59.760 37.037 0.00 0.00 41.12 1.31
2450 6495 6.045931 TCTCAATCCAATTAGGGAATGGCTAT 59.954 38.462 0.00 0.00 41.12 2.97
2451 6496 5.372363 TCTCAATCCAATTAGGGAATGGCTA 59.628 40.000 0.00 0.00 41.12 3.93
2452 6497 4.168675 TCTCAATCCAATTAGGGAATGGCT 59.831 41.667 0.00 0.00 41.12 4.75
2453 6498 4.279420 GTCTCAATCCAATTAGGGAATGGC 59.721 45.833 0.00 0.00 41.12 4.40
2454 6499 5.699143 AGTCTCAATCCAATTAGGGAATGG 58.301 41.667 0.00 0.00 41.12 3.16
2455 6500 5.468072 CGAGTCTCAATCCAATTAGGGAATG 59.532 44.000 0.00 0.00 41.12 2.67
2456 6501 5.455326 CCGAGTCTCAATCCAATTAGGGAAT 60.455 44.000 0.00 0.00 41.12 3.01
2457 6502 4.141711 CCGAGTCTCAATCCAATTAGGGAA 60.142 45.833 0.00 0.00 41.12 3.97
2458 6503 3.388024 CCGAGTCTCAATCCAATTAGGGA 59.612 47.826 0.00 0.00 42.21 4.20
2459 6504 3.388024 TCCGAGTCTCAATCCAATTAGGG 59.612 47.826 0.00 0.00 38.24 3.53
2460 6505 4.672587 TCCGAGTCTCAATCCAATTAGG 57.327 45.455 0.00 0.00 39.47 2.69
2461 6506 4.450419 GCATCCGAGTCTCAATCCAATTAG 59.550 45.833 0.00 0.00 0.00 1.73
2462 6507 4.101585 AGCATCCGAGTCTCAATCCAATTA 59.898 41.667 0.00 0.00 0.00 1.40
2463 6508 3.118112 AGCATCCGAGTCTCAATCCAATT 60.118 43.478 0.00 0.00 0.00 2.32
2464 6509 2.437281 AGCATCCGAGTCTCAATCCAAT 59.563 45.455 0.00 0.00 0.00 3.16
2465 6510 1.833630 AGCATCCGAGTCTCAATCCAA 59.166 47.619 0.00 0.00 0.00 3.53
2466 6511 1.489481 AGCATCCGAGTCTCAATCCA 58.511 50.000 0.00 0.00 0.00 3.41
2467 6512 2.887783 TCTAGCATCCGAGTCTCAATCC 59.112 50.000 0.00 0.00 0.00 3.01
2468 6513 4.037446 AGTTCTAGCATCCGAGTCTCAATC 59.963 45.833 0.00 0.00 0.00 2.67
2469 6514 3.957497 AGTTCTAGCATCCGAGTCTCAAT 59.043 43.478 0.00 0.00 0.00 2.57
2470 6515 3.357203 AGTTCTAGCATCCGAGTCTCAA 58.643 45.455 0.00 0.00 0.00 3.02
2471 6516 3.006112 AGTTCTAGCATCCGAGTCTCA 57.994 47.619 0.00 0.00 0.00 3.27
2472 6517 3.878103 TGTAGTTCTAGCATCCGAGTCTC 59.122 47.826 0.00 0.00 0.00 3.36
2473 6518 3.887352 TGTAGTTCTAGCATCCGAGTCT 58.113 45.455 0.00 0.00 0.00 3.24
2474 6519 4.352887 GTTGTAGTTCTAGCATCCGAGTC 58.647 47.826 0.00 0.00 0.00 3.36
2475 6520 3.130693 GGTTGTAGTTCTAGCATCCGAGT 59.869 47.826 0.00 0.00 0.00 4.18
2476 6521 3.707793 GGTTGTAGTTCTAGCATCCGAG 58.292 50.000 0.00 0.00 0.00 4.63
2477 6522 3.795623 GGTTGTAGTTCTAGCATCCGA 57.204 47.619 0.00 0.00 0.00 4.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.