Multiple sequence alignment - TraesCS5A01G473500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G473500 chr5A 100.000 2804 0 0 1 2804 649786169 649783366 0.000000e+00 5179.0
1 TraesCS5A01G473500 chr5A 91.274 573 41 3 1236 1805 23907560 23906994 0.000000e+00 773.0
2 TraesCS5A01G473500 chr5A 81.624 985 105 32 1233 2177 24198341 24199289 0.000000e+00 747.0
3 TraesCS5A01G473500 chr5A 84.036 664 62 22 600 1252 24197690 24198320 1.440000e-167 599.0
4 TraesCS5A01G473500 chr5A 87.088 364 26 13 897 1252 23907934 23907584 2.620000e-105 392.0
5 TraesCS5A01G473500 chr5A 84.577 201 19 7 600 791 23908181 23907984 3.690000e-44 189.0
6 TraesCS5A01G473500 chr5A 87.313 134 11 5 1965 2093 23906835 23906703 6.260000e-32 148.0
7 TraesCS5A01G473500 chr5A 92.222 90 7 0 2225 2314 493784336 493784425 8.150000e-26 128.0
8 TraesCS5A01G473500 chr5B 90.646 1625 75 33 598 2204 657723183 657721618 0.000000e+00 2087.0
9 TraesCS5A01G473500 chr5B 79.346 489 38 24 2321 2804 657721579 657721149 4.570000e-73 285.0
10 TraesCS5A01G473500 chr5D 92.577 1401 59 18 608 2001 521405165 521403803 0.000000e+00 1969.0
11 TraesCS5A01G473500 chr5D 91.255 709 47 10 1233 1931 35652496 35653199 0.000000e+00 952.0
12 TraesCS5A01G473500 chr5D 84.211 665 51 26 598 1252 35651855 35652475 5.170000e-167 597.0
13 TraesCS5A01G473500 chr5D 88.364 275 18 9 64 325 521405539 521405266 4.510000e-83 318.0
14 TraesCS5A01G473500 chr5D 79.915 234 19 11 1965 2181 35653197 35653419 2.250000e-31 147.0
15 TraesCS5A01G473500 chrUn 82.712 1556 131 71 599 2069 271013824 271015326 0.000000e+00 1256.0
16 TraesCS5A01G473500 chrUn 82.712 1556 131 71 599 2069 280884511 280886013 0.000000e+00 1256.0
17 TraesCS5A01G473500 chrUn 85.730 911 72 28 1238 2090 318996610 318997520 0.000000e+00 909.0
18 TraesCS5A01G473500 chrUn 85.730 911 72 28 1238 2090 397775668 397776578 0.000000e+00 909.0
19 TraesCS5A01G473500 chrUn 83.945 654 55 20 599 1244 318995966 318996577 5.210000e-162 580.0
20 TraesCS5A01G473500 chrUn 84.543 427 36 8 818 1244 397775239 397775635 2.020000e-106 396.0
21 TraesCS5A01G473500 chr3A 93.750 208 10 1 382 589 489239830 489240034 2.710000e-80 309.0
22 TraesCS5A01G473500 chr3A 93.258 89 6 0 2225 2313 25232801 25232889 6.300000e-27 132.0
23 TraesCS5A01G473500 chr3A 94.118 85 5 0 2231 2315 16248381 16248297 2.270000e-26 130.0
24 TraesCS5A01G473500 chr7A 92.308 208 13 1 382 589 453847782 453847986 2.730000e-75 292.0
25 TraesCS5A01G473500 chr7A 93.103 87 6 0 2232 2318 712463597 712463683 8.150000e-26 128.0
26 TraesCS5A01G473500 chr2A 92.683 205 11 2 385 589 482370207 482370007 2.730000e-75 292.0
27 TraesCS5A01G473500 chr2A 88.136 236 18 7 382 614 198618477 198618249 3.560000e-69 272.0
28 TraesCS5A01G473500 chr2A 95.238 84 4 0 2231 2314 442518264 442518347 1.750000e-27 134.0
29 TraesCS5A01G473500 chr2A 94.186 86 5 0 2231 2316 16064353 16064438 6.300000e-27 132.0
30 TraesCS5A01G473500 chr2A 94.118 85 5 0 2231 2315 105594674 105594758 2.270000e-26 130.0
31 TraesCS5A01G473500 chr4A 92.233 206 13 1 382 587 315836956 315837158 3.530000e-74 289.0
32 TraesCS5A01G473500 chr4A 95.238 84 4 0 2231 2314 169773349 169773432 1.750000e-27 134.0
33 TraesCS5A01G473500 chr2D 91.163 215 13 2 379 590 239094722 239094933 1.270000e-73 287.0
34 TraesCS5A01G473500 chr2B 89.035 228 18 6 382 609 491245840 491245620 2.750000e-70 276.0
35 TraesCS5A01G473500 chr2B 73.649 296 56 9 2334 2626 1214722 1214446 8.270000e-16 95.3
36 TraesCS5A01G473500 chr6D 88.085 235 20 6 382 614 319662018 319661790 3.560000e-69 272.0
37 TraesCS5A01G473500 chr6A 89.140 221 20 3 376 596 573865543 573865759 3.560000e-69 272.0
38 TraesCS5A01G473500 chr1A 92.135 89 7 0 2231 2319 352839844 352839932 2.930000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G473500 chr5A 649783366 649786169 2803 True 5179.000000 5179 100.0000 1 2804 1 chr5A.!!$R1 2803
1 TraesCS5A01G473500 chr5A 24197690 24199289 1599 False 673.000000 747 82.8300 600 2177 2 chr5A.!!$F2 1577
2 TraesCS5A01G473500 chr5A 23906703 23908181 1478 True 375.500000 773 87.5630 600 2093 4 chr5A.!!$R2 1493
3 TraesCS5A01G473500 chr5B 657721149 657723183 2034 True 1186.000000 2087 84.9960 598 2804 2 chr5B.!!$R1 2206
4 TraesCS5A01G473500 chr5D 521403803 521405539 1736 True 1143.500000 1969 90.4705 64 2001 2 chr5D.!!$R1 1937
5 TraesCS5A01G473500 chr5D 35651855 35653419 1564 False 565.333333 952 85.1270 598 2181 3 chr5D.!!$F1 1583
6 TraesCS5A01G473500 chrUn 271013824 271015326 1502 False 1256.000000 1256 82.7120 599 2069 1 chrUn.!!$F1 1470
7 TraesCS5A01G473500 chrUn 280884511 280886013 1502 False 1256.000000 1256 82.7120 599 2069 1 chrUn.!!$F2 1470
8 TraesCS5A01G473500 chrUn 318995966 318997520 1554 False 744.500000 909 84.8375 599 2090 2 chrUn.!!$F3 1491
9 TraesCS5A01G473500 chrUn 397775239 397776578 1339 False 652.500000 909 85.1365 818 2090 2 chrUn.!!$F4 1272

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 457 0.104304 GTCATCGGGCTGGTCGTAAT 59.896 55.0 0.0 0.0 0.0 1.89 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2239 2542 0.036022 TGGATGACACGTGGCATTCA 59.964 50.0 36.64 36.64 46.54 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.219436 CAATACACTGTTTCTAATGTGCTTTG 57.781 34.615 0.00 0.00 34.14 2.77
26 27 5.186996 ACACTGTTTCTAATGTGCTTTGG 57.813 39.130 0.00 0.00 34.14 3.28
27 28 4.644685 ACACTGTTTCTAATGTGCTTTGGT 59.355 37.500 0.00 0.00 34.14 3.67
28 29 5.825679 ACACTGTTTCTAATGTGCTTTGGTA 59.174 36.000 0.00 0.00 34.14 3.25
29 30 6.142817 CACTGTTTCTAATGTGCTTTGGTAC 58.857 40.000 0.00 0.00 0.00 3.34
30 31 5.825679 ACTGTTTCTAATGTGCTTTGGTACA 59.174 36.000 0.00 0.00 41.85 2.90
32 33 6.676950 TGTTTCTAATGTGCTTTGGTACATG 58.323 36.000 0.00 0.00 45.47 3.21
33 34 6.488344 TGTTTCTAATGTGCTTTGGTACATGA 59.512 34.615 0.00 0.00 45.47 3.07
34 35 6.494893 TTCTAATGTGCTTTGGTACATGAC 57.505 37.500 0.00 0.00 45.47 3.06
35 36 3.829886 AATGTGCTTTGGTACATGACG 57.170 42.857 0.00 0.00 45.47 4.35
36 37 2.535012 TGTGCTTTGGTACATGACGA 57.465 45.000 0.00 0.00 39.30 4.20
37 38 3.052455 TGTGCTTTGGTACATGACGAT 57.948 42.857 0.00 0.00 39.30 3.73
38 39 3.000041 TGTGCTTTGGTACATGACGATC 59.000 45.455 0.00 0.00 39.30 3.69
39 40 2.351726 GTGCTTTGGTACATGACGATCC 59.648 50.000 0.00 0.00 39.30 3.36
40 41 1.940613 GCTTTGGTACATGACGATCCC 59.059 52.381 0.00 0.00 39.30 3.85
41 42 2.420129 GCTTTGGTACATGACGATCCCT 60.420 50.000 0.00 0.00 39.30 4.20
42 43 3.873910 CTTTGGTACATGACGATCCCTT 58.126 45.455 0.00 0.00 39.30 3.95
43 44 2.979814 TGGTACATGACGATCCCTTG 57.020 50.000 0.00 0.00 0.00 3.61
44 45 1.484653 TGGTACATGACGATCCCTTGG 59.515 52.381 0.00 0.00 0.00 3.61
45 46 1.485066 GGTACATGACGATCCCTTGGT 59.515 52.381 0.00 0.00 0.00 3.67
46 47 2.696707 GGTACATGACGATCCCTTGGTA 59.303 50.000 0.00 0.00 0.00 3.25
47 48 2.981859 ACATGACGATCCCTTGGTAC 57.018 50.000 0.00 0.00 0.00 3.34
48 49 1.485066 ACATGACGATCCCTTGGTACC 59.515 52.381 4.43 4.43 0.00 3.34
49 50 0.750850 ATGACGATCCCTTGGTACCG 59.249 55.000 7.57 0.00 0.00 4.02
50 51 0.323633 TGACGATCCCTTGGTACCGA 60.324 55.000 7.57 4.16 0.00 4.69
51 52 0.384669 GACGATCCCTTGGTACCGAG 59.615 60.000 21.02 21.02 0.00 4.63
52 53 1.067582 CGATCCCTTGGTACCGAGC 59.932 63.158 22.36 8.07 0.00 5.03
53 54 1.067582 GATCCCTTGGTACCGAGCG 59.932 63.158 22.36 14.98 0.00 5.03
54 55 2.365095 GATCCCTTGGTACCGAGCGG 62.365 65.000 22.36 22.26 42.03 5.52
55 56 4.157120 CCCTTGGTACCGAGCGGG 62.157 72.222 22.36 16.62 43.62 6.13
56 57 3.072468 CCTTGGTACCGAGCGGGA 61.072 66.667 22.36 0.69 39.97 5.14
57 58 2.494918 CTTGGTACCGAGCGGGAG 59.505 66.667 16.47 0.00 39.97 4.30
72 73 1.049402 GGGAGCCACTACCTATGGTC 58.951 60.000 0.00 0.00 39.63 4.02
86 87 3.572255 CCTATGGTCTCTGCTAGAAGGAC 59.428 52.174 9.71 9.71 35.47 3.85
94 96 3.374764 TCTGCTAGAAGGACTTGGCATA 58.625 45.455 0.00 0.00 36.32 3.14
115 117 6.349363 GCATAAACTCTTCAACTAAACCTGGG 60.349 42.308 0.00 0.00 0.00 4.45
120 122 3.826157 TCTTCAACTAAACCTGGGCATTG 59.174 43.478 0.00 0.00 0.00 2.82
128 130 4.137872 CTGGGCATTGCTTGGGCG 62.138 66.667 8.82 0.00 42.25 6.13
133 135 2.262292 CATTGCTTGGGCGGGTTG 59.738 61.111 0.00 0.00 42.25 3.77
144 146 0.106868 GGCGGGTTGTATAAAGCCCT 60.107 55.000 12.69 0.00 38.97 5.19
149 151 2.171237 GGGTTGTATAAAGCCCTACCGT 59.829 50.000 7.59 0.00 38.12 4.83
152 154 4.811024 GGTTGTATAAAGCCCTACCGTAAC 59.189 45.833 0.00 0.00 0.00 2.50
158 160 0.837260 AGCCCTACCGTAACAACCCA 60.837 55.000 0.00 0.00 0.00 4.51
160 162 1.545204 GCCCTACCGTAACAACCCAAA 60.545 52.381 0.00 0.00 0.00 3.28
172 174 2.308690 CAACCCAAACCCGGTTCTAAA 58.691 47.619 2.46 0.00 41.78 1.85
181 183 6.421501 CCAAACCCGGTTCTAAACAATTAAAC 59.578 38.462 2.46 0.00 0.00 2.01
185 187 6.997476 ACCCGGTTCTAAACAATTAAACTGTA 59.003 34.615 0.00 0.00 0.00 2.74
349 413 2.628178 TGTCCGAGAGAGAACATGTGTT 59.372 45.455 0.00 0.00 41.64 3.32
359 423 6.827251 AGAGAGAACATGTGTTATCATGCATT 59.173 34.615 19.11 1.47 45.70 3.56
360 424 7.012138 AGAGAGAACATGTGTTATCATGCATTC 59.988 37.037 19.11 9.20 45.70 2.67
361 425 6.039047 AGAGAACATGTGTTATCATGCATTCC 59.961 38.462 19.11 0.22 45.70 3.01
362 426 4.924305 ACATGTGTTATCATGCATTCCC 57.076 40.909 0.00 0.00 46.15 3.97
363 427 3.316029 ACATGTGTTATCATGCATTCCCG 59.684 43.478 0.00 0.00 46.15 5.14
364 428 2.997980 TGTGTTATCATGCATTCCCGT 58.002 42.857 0.00 0.00 0.00 5.28
365 429 4.143986 TGTGTTATCATGCATTCCCGTA 57.856 40.909 0.00 0.00 0.00 4.02
366 430 4.518249 TGTGTTATCATGCATTCCCGTAA 58.482 39.130 0.00 0.00 0.00 3.18
367 431 4.944317 TGTGTTATCATGCATTCCCGTAAA 59.056 37.500 0.00 0.00 0.00 2.01
368 432 5.416013 TGTGTTATCATGCATTCCCGTAAAA 59.584 36.000 0.00 0.00 0.00 1.52
369 433 6.071896 TGTGTTATCATGCATTCCCGTAAAAA 60.072 34.615 0.00 0.00 0.00 1.94
387 451 1.923356 AAAAATGTCATCGGGCTGGT 58.077 45.000 0.00 0.00 0.00 4.00
388 452 1.463674 AAAATGTCATCGGGCTGGTC 58.536 50.000 0.00 0.00 0.00 4.02
389 453 0.744414 AAATGTCATCGGGCTGGTCG 60.744 55.000 0.00 0.00 0.00 4.79
390 454 1.899437 AATGTCATCGGGCTGGTCGT 61.899 55.000 0.00 0.00 0.00 4.34
391 455 1.040893 ATGTCATCGGGCTGGTCGTA 61.041 55.000 0.00 0.00 0.00 3.43
392 456 1.252215 TGTCATCGGGCTGGTCGTAA 61.252 55.000 0.00 0.00 0.00 3.18
393 457 0.104304 GTCATCGGGCTGGTCGTAAT 59.896 55.000 0.00 0.00 0.00 1.89
394 458 1.338973 GTCATCGGGCTGGTCGTAATA 59.661 52.381 0.00 0.00 0.00 0.98
395 459 2.033372 TCATCGGGCTGGTCGTAATAA 58.967 47.619 0.00 0.00 0.00 1.40
396 460 2.431419 TCATCGGGCTGGTCGTAATAAA 59.569 45.455 0.00 0.00 0.00 1.40
397 461 3.118702 TCATCGGGCTGGTCGTAATAAAA 60.119 43.478 0.00 0.00 0.00 1.52
398 462 2.896168 TCGGGCTGGTCGTAATAAAAG 58.104 47.619 0.00 0.00 0.00 2.27
399 463 2.234414 TCGGGCTGGTCGTAATAAAAGT 59.766 45.455 0.00 0.00 0.00 2.66
400 464 3.446873 TCGGGCTGGTCGTAATAAAAGTA 59.553 43.478 0.00 0.00 0.00 2.24
401 465 4.099881 TCGGGCTGGTCGTAATAAAAGTAT 59.900 41.667 0.00 0.00 0.00 2.12
402 466 4.446719 CGGGCTGGTCGTAATAAAAGTATC 59.553 45.833 0.00 0.00 0.00 2.24
403 467 5.362263 GGGCTGGTCGTAATAAAAGTATCA 58.638 41.667 0.00 0.00 0.00 2.15
404 468 5.995897 GGGCTGGTCGTAATAAAAGTATCAT 59.004 40.000 0.00 0.00 0.00 2.45
405 469 7.156673 GGGCTGGTCGTAATAAAAGTATCATA 58.843 38.462 0.00 0.00 0.00 2.15
406 470 7.658575 GGGCTGGTCGTAATAAAAGTATCATAA 59.341 37.037 0.00 0.00 0.00 1.90
407 471 8.709646 GGCTGGTCGTAATAAAAGTATCATAAG 58.290 37.037 0.00 0.00 0.00 1.73
408 472 8.221766 GCTGGTCGTAATAAAAGTATCATAAGC 58.778 37.037 0.00 0.00 0.00 3.09
409 473 8.289440 TGGTCGTAATAAAAGTATCATAAGCG 57.711 34.615 0.00 0.00 0.00 4.68
410 474 7.383029 TGGTCGTAATAAAAGTATCATAAGCGG 59.617 37.037 0.00 0.00 0.00 5.52
411 475 7.383300 GGTCGTAATAAAAGTATCATAAGCGGT 59.617 37.037 0.00 0.00 0.00 5.68
412 476 9.398170 GTCGTAATAAAAGTATCATAAGCGGTA 57.602 33.333 0.00 0.00 0.00 4.02
418 482 6.727824 AAAGTATCATAAGCGGTATCATGC 57.272 37.500 0.00 0.00 0.00 4.06
419 483 5.405935 AGTATCATAAGCGGTATCATGCA 57.594 39.130 0.00 0.00 0.00 3.96
420 484 5.982356 AGTATCATAAGCGGTATCATGCAT 58.018 37.500 0.00 0.00 0.00 3.96
421 485 5.814188 AGTATCATAAGCGGTATCATGCATG 59.186 40.000 21.07 21.07 0.00 4.06
422 486 2.743664 TCATAAGCGGTATCATGCATGC 59.256 45.455 22.25 11.82 0.00 4.06
423 487 1.522668 TAAGCGGTATCATGCATGCC 58.477 50.000 22.25 15.88 33.88 4.40
424 488 0.466007 AAGCGGTATCATGCATGCCA 60.466 50.000 22.25 8.84 37.09 4.92
425 489 0.466007 AGCGGTATCATGCATGCCAA 60.466 50.000 22.25 5.34 37.09 4.52
426 490 0.318107 GCGGTATCATGCATGCCAAC 60.318 55.000 22.25 17.38 37.09 3.77
427 491 1.311859 CGGTATCATGCATGCCAACT 58.688 50.000 22.25 6.33 37.09 3.16
428 492 2.493035 CGGTATCATGCATGCCAACTA 58.507 47.619 22.25 3.72 37.09 2.24
429 493 2.481568 CGGTATCATGCATGCCAACTAG 59.518 50.000 22.25 12.56 37.09 2.57
430 494 3.743521 GGTATCATGCATGCCAACTAGA 58.256 45.455 22.25 2.12 37.22 2.43
431 495 3.499918 GGTATCATGCATGCCAACTAGAC 59.500 47.826 22.25 10.57 37.22 2.59
432 496 3.572632 ATCATGCATGCCAACTAGACT 57.427 42.857 22.25 0.00 0.00 3.24
433 497 3.354948 TCATGCATGCCAACTAGACTT 57.645 42.857 22.25 0.00 0.00 3.01
434 498 3.689347 TCATGCATGCCAACTAGACTTT 58.311 40.909 22.25 0.00 0.00 2.66
435 499 4.081406 TCATGCATGCCAACTAGACTTTT 58.919 39.130 22.25 0.00 0.00 2.27
436 500 4.523943 TCATGCATGCCAACTAGACTTTTT 59.476 37.500 22.25 0.00 0.00 1.94
437 501 4.241590 TGCATGCCAACTAGACTTTTTG 57.758 40.909 16.68 0.00 0.00 2.44
438 502 3.888323 TGCATGCCAACTAGACTTTTTGA 59.112 39.130 16.68 0.00 0.00 2.69
439 503 4.340666 TGCATGCCAACTAGACTTTTTGAA 59.659 37.500 16.68 0.00 0.00 2.69
440 504 5.010922 TGCATGCCAACTAGACTTTTTGAAT 59.989 36.000 16.68 0.00 0.00 2.57
441 505 5.346822 GCATGCCAACTAGACTTTTTGAATG 59.653 40.000 6.36 0.00 0.00 2.67
442 506 6.680810 CATGCCAACTAGACTTTTTGAATGA 58.319 36.000 0.00 0.00 0.00 2.57
443 507 6.899393 TGCCAACTAGACTTTTTGAATGAT 57.101 33.333 0.00 0.00 0.00 2.45
444 508 6.680810 TGCCAACTAGACTTTTTGAATGATG 58.319 36.000 0.00 0.00 0.00 3.07
445 509 6.265196 TGCCAACTAGACTTTTTGAATGATGT 59.735 34.615 0.00 0.00 0.00 3.06
446 510 6.583806 GCCAACTAGACTTTTTGAATGATGTG 59.416 38.462 0.00 0.00 0.00 3.21
447 511 7.086376 CCAACTAGACTTTTTGAATGATGTGG 58.914 38.462 0.00 0.00 0.00 4.17
448 512 6.259550 ACTAGACTTTTTGAATGATGTGGC 57.740 37.500 0.00 0.00 0.00 5.01
449 513 5.769662 ACTAGACTTTTTGAATGATGTGGCA 59.230 36.000 0.00 0.00 0.00 4.92
450 514 4.874970 AGACTTTTTGAATGATGTGGCAC 58.125 39.130 11.55 11.55 0.00 5.01
451 515 4.341806 AGACTTTTTGAATGATGTGGCACA 59.658 37.500 24.36 24.36 0.00 4.57
452 516 5.011329 AGACTTTTTGAATGATGTGGCACAT 59.989 36.000 31.84 31.84 44.52 3.21
453 517 6.209192 AGACTTTTTGAATGATGTGGCACATA 59.791 34.615 31.48 19.72 44.52 2.29
454 518 6.757237 ACTTTTTGAATGATGTGGCACATAA 58.243 32.000 31.48 25.73 44.52 1.90
455 519 7.388437 ACTTTTTGAATGATGTGGCACATAAT 58.612 30.769 31.48 26.79 44.52 1.28
456 520 7.879160 ACTTTTTGAATGATGTGGCACATAATT 59.121 29.630 33.53 33.53 41.28 1.40
457 521 9.368674 CTTTTTGAATGATGTGGCACATAATTA 57.631 29.630 33.22 21.19 39.25 1.40
458 522 9.716531 TTTTTGAATGATGTGGCACATAATTAA 57.283 25.926 33.22 26.87 39.25 1.40
459 523 9.716531 TTTTGAATGATGTGGCACATAATTAAA 57.283 25.926 33.22 29.97 39.25 1.52
460 524 9.887629 TTTGAATGATGTGGCACATAATTAAAT 57.112 25.926 33.22 18.40 39.25 1.40
461 525 8.874744 TGAATGATGTGGCACATAATTAAATG 57.125 30.769 33.22 0.00 39.25 2.32
462 526 8.693625 TGAATGATGTGGCACATAATTAAATGA 58.306 29.630 33.22 17.43 39.25 2.57
463 527 9.188588 GAATGATGTGGCACATAATTAAATGAG 57.811 33.333 33.22 0.00 39.25 2.90
464 528 7.878547 TGATGTGGCACATAATTAAATGAGA 57.121 32.000 31.48 0.00 44.52 3.27
465 529 8.291191 TGATGTGGCACATAATTAAATGAGAA 57.709 30.769 31.48 0.00 44.52 2.87
466 530 8.747471 TGATGTGGCACATAATTAAATGAGAAA 58.253 29.630 31.48 0.00 44.52 2.52
467 531 9.585099 GATGTGGCACATAATTAAATGAGAAAA 57.415 29.630 31.48 0.00 44.52 2.29
468 532 9.941325 ATGTGGCACATAATTAAATGAGAAAAA 57.059 25.926 30.56 0.00 44.52 1.94
489 553 6.575244 AAAAGAGGGTGTGGTATCATATCA 57.425 37.500 0.00 0.00 0.00 2.15
490 554 6.770286 AAAGAGGGTGTGGTATCATATCAT 57.230 37.500 0.00 0.00 0.00 2.45
491 555 5.752036 AGAGGGTGTGGTATCATATCATG 57.248 43.478 0.00 0.00 0.00 3.07
492 556 5.406163 AGAGGGTGTGGTATCATATCATGA 58.594 41.667 0.00 0.00 44.55 3.07
536 600 8.737168 ATTATACTACTTTGTGTCATGCATGT 57.263 30.769 25.43 6.98 0.00 3.21
537 601 6.668541 ATACTACTTTGTGTCATGCATGTC 57.331 37.500 25.43 20.50 0.00 3.06
538 602 4.388485 ACTACTTTGTGTCATGCATGTCA 58.612 39.130 25.43 22.87 0.00 3.58
539 603 4.821260 ACTACTTTGTGTCATGCATGTCAA 59.179 37.500 24.86 22.59 0.00 3.18
540 604 4.859304 ACTTTGTGTCATGCATGTCAAT 57.141 36.364 24.86 12.74 0.00 2.57
541 605 5.204409 ACTTTGTGTCATGCATGTCAATT 57.796 34.783 24.86 15.14 0.00 2.32
542 606 6.330004 ACTTTGTGTCATGCATGTCAATTA 57.670 33.333 24.86 13.47 0.00 1.40
543 607 6.747125 ACTTTGTGTCATGCATGTCAATTAA 58.253 32.000 24.86 17.59 0.00 1.40
544 608 7.380536 ACTTTGTGTCATGCATGTCAATTAAT 58.619 30.769 24.86 10.71 0.00 1.40
545 609 8.522003 ACTTTGTGTCATGCATGTCAATTAATA 58.478 29.630 24.86 12.78 0.00 0.98
546 610 9.356433 CTTTGTGTCATGCATGTCAATTAATAA 57.644 29.630 24.86 12.24 0.00 1.40
547 611 8.914328 TTGTGTCATGCATGTCAATTAATAAG 57.086 30.769 24.86 0.00 0.00 1.73
548 612 7.482474 TGTGTCATGCATGTCAATTAATAAGG 58.518 34.615 24.86 0.00 0.00 2.69
549 613 6.418819 GTGTCATGCATGTCAATTAATAAGGC 59.581 38.462 24.86 7.86 0.00 4.35
550 614 5.922544 GTCATGCATGTCAATTAATAAGGCC 59.077 40.000 25.43 0.00 0.00 5.19
551 615 5.597594 TCATGCATGTCAATTAATAAGGCCA 59.402 36.000 25.43 0.00 0.00 5.36
552 616 5.261209 TGCATGTCAATTAATAAGGCCAC 57.739 39.130 5.01 0.00 0.00 5.01
553 617 4.099266 TGCATGTCAATTAATAAGGCCACC 59.901 41.667 5.01 0.00 0.00 4.61
554 618 4.342092 GCATGTCAATTAATAAGGCCACCT 59.658 41.667 5.01 0.00 33.87 4.00
555 619 5.534654 GCATGTCAATTAATAAGGCCACCTA 59.465 40.000 5.01 0.00 31.13 3.08
556 620 6.040391 GCATGTCAATTAATAAGGCCACCTAA 59.960 38.462 5.01 0.00 31.13 2.69
557 621 7.255942 GCATGTCAATTAATAAGGCCACCTAAT 60.256 37.037 5.01 0.00 31.13 1.73
558 622 9.295825 CATGTCAATTAATAAGGCCACCTAATA 57.704 33.333 5.01 0.00 31.13 0.98
559 623 9.875708 ATGTCAATTAATAAGGCCACCTAATAA 57.124 29.630 5.01 0.00 31.13 1.40
560 624 9.349713 TGTCAATTAATAAGGCCACCTAATAAG 57.650 33.333 5.01 0.18 31.13 1.73
561 625 9.569122 GTCAATTAATAAGGCCACCTAATAAGA 57.431 33.333 5.01 2.41 31.13 2.10
569 633 7.932683 AAGGCCACCTAATAAGATACTAACT 57.067 36.000 5.01 0.00 31.13 2.24
570 634 7.932683 AGGCCACCTAATAAGATACTAACTT 57.067 36.000 5.01 0.00 28.47 2.66
571 635 9.443365 AAGGCCACCTAATAAGATACTAACTTA 57.557 33.333 5.01 0.00 31.13 2.24
572 636 9.617053 AGGCCACCTAATAAGATACTAACTTAT 57.383 33.333 5.01 0.00 40.73 1.73
573 637 9.654663 GGCCACCTAATAAGATACTAACTTATG 57.345 37.037 0.00 0.00 39.50 1.90
708 779 9.801873 ACGATGGATGGAAATTTTGTTATAAAG 57.198 29.630 0.00 0.00 0.00 1.85
808 907 9.271828 CTGCTGGTGAAAAATAACCTTAATTTT 57.728 29.630 0.00 0.00 37.36 1.82
870 969 8.303876 AGCCGTCAAATAAATAAACAAATCTGT 58.696 29.630 0.00 0.00 37.39 3.41
923 1026 6.202516 TGATGGATGTGCAATGCATATATG 57.797 37.500 17.19 8.45 40.28 1.78
953 1060 9.593134 TGTGTGTATAAATAAAATGGAAATGCC 57.407 29.630 0.00 0.00 37.10 4.40
954 1061 9.040939 GTGTGTATAAATAAAATGGAAATGCCC 57.959 33.333 0.00 0.00 34.97 5.36
955 1062 7.923344 TGTGTATAAATAAAATGGAAATGCCCG 59.077 33.333 0.00 0.00 34.97 6.13
958 1065 0.827368 TAAAATGGAAATGCCCGGCC 59.173 50.000 7.03 0.00 34.97 6.13
959 1066 2.237534 AAAATGGAAATGCCCGGCCG 62.238 55.000 21.04 21.04 34.97 6.13
1231 1395 2.687200 CGGATGACTCCCCCACCA 60.687 66.667 0.00 0.00 38.45 4.17
1314 1481 2.870161 CTCGAACTGGACGCGTCG 60.870 66.667 30.99 21.22 0.00 5.12
1753 1935 3.414700 GCTGGCACGACGTCAAGG 61.415 66.667 17.16 5.04 0.00 3.61
1811 2021 0.530650 GGAGGCGCTTGATTCATCGA 60.531 55.000 7.64 0.00 0.00 3.59
1812 2022 1.506493 GAGGCGCTTGATTCATCGAT 58.494 50.000 7.64 0.00 0.00 3.59
1834 2052 0.179217 CACACATGCATGTTCCGTCG 60.179 55.000 29.48 18.82 39.39 5.12
1878 2108 3.435327 TGACCATTGTTGAGTCGTTATGC 59.565 43.478 0.00 0.00 33.09 3.14
1886 2116 1.066215 TGAGTCGTTATGCTGCATGGT 60.066 47.619 24.59 2.10 0.00 3.55
1891 2137 1.867233 CGTTATGCTGCATGGTACTCC 59.133 52.381 24.59 4.12 0.00 3.85
1935 2188 6.920758 TGCAAATTGGTGTAATGTTGAGTTAC 59.079 34.615 0.00 0.00 33.67 2.50
2019 2276 4.130286 AGAAGACCTATTCCTTTGCTCG 57.870 45.455 0.00 0.00 0.00 5.03
2020 2277 2.990066 AGACCTATTCCTTTGCTCGG 57.010 50.000 0.00 0.00 0.00 4.63
2021 2278 2.467880 AGACCTATTCCTTTGCTCGGA 58.532 47.619 0.00 0.00 0.00 4.55
2022 2279 3.041946 AGACCTATTCCTTTGCTCGGAT 58.958 45.455 0.00 0.00 0.00 4.18
2023 2280 3.456277 AGACCTATTCCTTTGCTCGGATT 59.544 43.478 0.00 0.00 0.00 3.01
2024 2281 4.654262 AGACCTATTCCTTTGCTCGGATTA 59.346 41.667 0.00 0.00 0.00 1.75
2025 2282 5.130477 AGACCTATTCCTTTGCTCGGATTAA 59.870 40.000 0.00 0.00 0.00 1.40
2026 2283 5.941788 ACCTATTCCTTTGCTCGGATTAAT 58.058 37.500 0.00 0.00 0.00 1.40
2027 2284 5.998363 ACCTATTCCTTTGCTCGGATTAATC 59.002 40.000 6.93 6.93 0.00 1.75
2054 2326 2.202492 CGTCTCTGACTTCGGGCG 60.202 66.667 0.00 0.00 0.00 6.13
2141 2434 1.832883 ATAATGTGCCCGTGCTTTGA 58.167 45.000 0.00 0.00 38.71 2.69
2177 2479 3.017442 GGAAAATGGTAAGCTCTCCACC 58.983 50.000 11.25 6.00 36.50 4.61
2204 2507 0.919710 GGGGGTATGCTCTCCACTTT 59.080 55.000 0.00 0.00 0.00 2.66
2206 2509 2.104963 GGGGGTATGCTCTCCACTTTAG 59.895 54.545 0.00 0.00 0.00 1.85
2208 2511 2.104963 GGGTATGCTCTCCACTTTAGGG 59.895 54.545 0.00 0.00 0.00 3.53
2210 2513 1.972588 ATGCTCTCCACTTTAGGGGT 58.027 50.000 0.00 0.00 0.00 4.95
2213 2516 2.771943 TGCTCTCCACTTTAGGGGTATG 59.228 50.000 0.00 0.00 0.00 2.39
2214 2517 2.772515 GCTCTCCACTTTAGGGGTATGT 59.227 50.000 0.00 0.00 0.00 2.29
2216 2519 4.683671 GCTCTCCACTTTAGGGGTATGTTC 60.684 50.000 0.00 0.00 0.00 3.18
2217 2520 4.431378 TCTCCACTTTAGGGGTATGTTCA 58.569 43.478 0.00 0.00 0.00 3.18
2218 2521 5.036916 TCTCCACTTTAGGGGTATGTTCAT 58.963 41.667 0.00 0.00 0.00 2.57
2220 2523 6.099269 TCTCCACTTTAGGGGTATGTTCATAC 59.901 42.308 12.80 12.80 0.00 2.39
2221 2524 5.054477 CCACTTTAGGGGTATGTTCATACG 58.946 45.833 14.22 4.39 0.00 3.06
2223 2526 6.183360 CCACTTTAGGGGTATGTTCATACGTA 60.183 42.308 14.22 0.00 0.00 3.57
2225 2528 7.929785 CACTTTAGGGGTATGTTCATACGTAAT 59.070 37.037 14.22 0.00 0.00 1.89
2226 2529 9.146586 ACTTTAGGGGTATGTTCATACGTAATA 57.853 33.333 14.22 0.00 0.00 0.98
2229 2532 5.769662 AGGGGTATGTTCATACGTAATACGA 59.230 40.000 20.34 3.69 46.05 3.43
2230 2533 6.435277 AGGGGTATGTTCATACGTAATACGAT 59.565 38.462 20.34 5.93 46.05 3.73
2231 2534 6.529125 GGGGTATGTTCATACGTAATACGATG 59.471 42.308 20.34 16.74 46.05 3.84
2232 2535 7.086376 GGGTATGTTCATACGTAATACGATGT 58.914 38.462 20.34 0.00 46.05 3.06
2233 2536 7.061441 GGGTATGTTCATACGTAATACGATGTG 59.939 40.741 20.34 13.65 46.05 3.21
2234 2537 7.804600 GGTATGTTCATACGTAATACGATGTGA 59.195 37.037 20.34 15.53 46.05 3.58
2236 2539 8.812147 ATGTTCATACGTAATACGATGTGATT 57.188 30.769 20.34 0.00 46.05 2.57
2237 2540 8.637281 TGTTCATACGTAATACGATGTGATTT 57.363 30.769 20.34 0.00 46.05 2.17
2238 2541 8.536407 TGTTCATACGTAATACGATGTGATTTG 58.464 33.333 20.34 1.83 46.05 2.32
2239 2542 8.537223 GTTCATACGTAATACGATGTGATTTGT 58.463 33.333 20.34 0.00 46.05 2.83
2240 2543 8.056710 TCATACGTAATACGATGTGATTTGTG 57.943 34.615 20.34 3.30 46.05 3.33
2242 2545 6.954616 ACGTAATACGATGTGATTTGTGAA 57.045 33.333 20.34 0.00 46.05 3.18
2243 2546 7.534085 ACGTAATACGATGTGATTTGTGAAT 57.466 32.000 20.34 0.00 46.05 2.57
2244 2547 7.398746 ACGTAATACGATGTGATTTGTGAATG 58.601 34.615 20.34 0.00 46.05 2.67
2245 2548 6.354362 CGTAATACGATGTGATTTGTGAATGC 59.646 38.462 7.05 0.00 46.05 3.56
2246 2549 3.492421 ACGATGTGATTTGTGAATGCC 57.508 42.857 0.00 0.00 0.00 4.40
2247 2550 2.819019 ACGATGTGATTTGTGAATGCCA 59.181 40.909 0.00 0.00 0.00 4.92
2248 2551 3.173599 CGATGTGATTTGTGAATGCCAC 58.826 45.455 0.00 0.00 45.88 5.01
2256 2559 3.975992 GTGAATGCCACGTGTCATC 57.024 52.632 13.12 7.23 35.86 2.92
2257 2560 0.447801 GTGAATGCCACGTGTCATCC 59.552 55.000 13.12 0.00 35.86 3.51
2258 2561 0.036022 TGAATGCCACGTGTCATCCA 59.964 50.000 13.12 2.86 0.00 3.41
2259 2562 1.339920 TGAATGCCACGTGTCATCCAT 60.340 47.619 13.12 0.00 0.00 3.41
2260 2563 1.331756 GAATGCCACGTGTCATCCATC 59.668 52.381 13.12 3.25 0.00 3.51
2261 2564 0.252761 ATGCCACGTGTCATCCATCA 59.747 50.000 15.65 0.00 0.00 3.07
2262 2565 0.391528 TGCCACGTGTCATCCATCAG 60.392 55.000 15.65 0.00 0.00 2.90
2263 2566 1.091771 GCCACGTGTCATCCATCAGG 61.092 60.000 15.65 0.00 0.00 3.86
2273 2576 2.900547 TCCATCAGGATGCGTCTCA 58.099 52.632 5.77 0.00 39.61 3.27
2274 2577 0.461548 TCCATCAGGATGCGTCTCAC 59.538 55.000 5.77 0.00 39.61 3.51
2275 2578 0.176449 CCATCAGGATGCGTCTCACA 59.824 55.000 5.77 0.00 37.49 3.58
2276 2579 1.202615 CCATCAGGATGCGTCTCACAT 60.203 52.381 5.77 0.00 37.49 3.21
2277 2580 2.036346 CCATCAGGATGCGTCTCACATA 59.964 50.000 5.77 0.00 37.49 2.29
2278 2581 3.306571 CCATCAGGATGCGTCTCACATAT 60.307 47.826 5.77 0.00 37.49 1.78
2279 2582 4.313282 CATCAGGATGCGTCTCACATATT 58.687 43.478 5.77 0.00 34.76 1.28
2280 2583 5.473039 CATCAGGATGCGTCTCACATATTA 58.527 41.667 5.77 0.00 34.76 0.98
2281 2584 5.529581 TCAGGATGCGTCTCACATATTAA 57.470 39.130 5.77 0.00 34.76 1.40
2282 2585 5.289595 TCAGGATGCGTCTCACATATTAAC 58.710 41.667 5.77 0.00 34.76 2.01
2283 2586 4.449068 CAGGATGCGTCTCACATATTAACC 59.551 45.833 5.77 0.00 0.00 2.85
2284 2587 3.428870 GGATGCGTCTCACATATTAACCG 59.571 47.826 5.77 0.00 0.00 4.44
2285 2588 3.513680 TGCGTCTCACATATTAACCGT 57.486 42.857 0.00 0.00 0.00 4.83
2286 2589 3.183754 TGCGTCTCACATATTAACCGTG 58.816 45.455 0.00 0.00 0.00 4.94
2287 2590 3.119424 TGCGTCTCACATATTAACCGTGA 60.119 43.478 0.00 0.00 37.33 4.35
2293 2596 5.006153 TCACATATTAACCGTGAGACCTG 57.994 43.478 0.00 0.00 34.83 4.00
2294 2597 4.119862 CACATATTAACCGTGAGACCTGG 58.880 47.826 0.00 0.00 32.23 4.45
2295 2598 3.773119 ACATATTAACCGTGAGACCTGGT 59.227 43.478 0.00 0.00 37.68 4.00
2296 2599 4.142004 ACATATTAACCGTGAGACCTGGTC 60.142 45.833 19.20 19.20 34.11 4.02
2297 2600 2.005370 TTAACCGTGAGACCTGGTCT 57.995 50.000 28.70 28.70 46.42 3.85
2331 2634 1.227674 CGATCTGGGGTAAGCTGGC 60.228 63.158 0.00 0.00 0.00 4.85
2332 2635 1.227674 GATCTGGGGTAAGCTGGCG 60.228 63.158 0.00 0.00 0.00 5.69
2335 2638 1.144057 CTGGGGTAAGCTGGCGTAG 59.856 63.158 0.00 0.00 0.00 3.51
2347 2650 1.949525 CTGGCGTAGGGATGAAAATGG 59.050 52.381 0.00 0.00 0.00 3.16
2358 2661 3.945285 GGATGAAAATGGAGCGGAAACTA 59.055 43.478 0.00 0.00 0.00 2.24
2371 2674 3.261981 GGAAACTATCCGCCTTTCTGA 57.738 47.619 0.00 0.00 38.79 3.27
2373 2676 3.596214 GAAACTATCCGCCTTTCTGACA 58.404 45.455 0.00 0.00 0.00 3.58
2381 2684 2.357637 CCGCCTTTCTGACAGAAAAACA 59.642 45.455 26.40 9.17 42.95 2.83
2383 2686 4.420168 CGCCTTTCTGACAGAAAAACAAA 58.580 39.130 26.40 8.18 42.95 2.83
2406 2710 5.959618 AACTAGAGGAAAAACGGAAATGG 57.040 39.130 0.00 0.00 0.00 3.16
2412 2716 3.633065 AGGAAAAACGGAAATGGAAACGA 59.367 39.130 0.00 0.00 0.00 3.85
2414 2718 4.804665 GGAAAAACGGAAATGGAAACGAAA 59.195 37.500 0.00 0.00 0.00 3.46
2415 2719 5.276489 GGAAAAACGGAAATGGAAACGAAAC 60.276 40.000 0.00 0.00 0.00 2.78
2416 2720 4.642445 AAACGGAAATGGAAACGAAACT 57.358 36.364 0.00 0.00 0.00 2.66
2417 2721 4.642445 AACGGAAATGGAAACGAAACTT 57.358 36.364 0.00 0.00 0.00 2.66
2418 2722 4.642445 ACGGAAATGGAAACGAAACTTT 57.358 36.364 0.00 0.00 0.00 2.66
2419 2723 4.356289 ACGGAAATGGAAACGAAACTTTG 58.644 39.130 0.00 0.00 0.00 2.77
2420 2724 3.181575 CGGAAATGGAAACGAAACTTTGC 59.818 43.478 0.00 0.00 0.00 3.68
2421 2725 4.116238 GGAAATGGAAACGAAACTTTGCA 58.884 39.130 0.00 0.00 36.12 4.08
2422 2726 4.568760 GGAAATGGAAACGAAACTTTGCAA 59.431 37.500 0.00 0.00 35.41 4.08
2423 2727 5.064071 GGAAATGGAAACGAAACTTTGCAAA 59.936 36.000 12.14 12.14 35.41 3.68
2424 2728 6.402658 GGAAATGGAAACGAAACTTTGCAAAA 60.403 34.615 13.84 0.00 35.41 2.44
2425 2729 6.487689 AATGGAAACGAAACTTTGCAAAAA 57.512 29.167 13.84 0.00 35.41 1.94
2426 2730 5.523013 TGGAAACGAAACTTTGCAAAAAG 57.477 34.783 13.84 4.88 29.47 2.27
2427 2731 4.390297 TGGAAACGAAACTTTGCAAAAAGG 59.610 37.500 13.84 4.32 34.18 3.11
2428 2732 4.627900 GGAAACGAAACTTTGCAAAAAGGA 59.372 37.500 13.84 0.00 34.18 3.36
2429 2733 5.120986 GGAAACGAAACTTTGCAAAAAGGAA 59.879 36.000 13.84 0.00 34.18 3.36
2430 2734 6.347806 GGAAACGAAACTTTGCAAAAAGGAAA 60.348 34.615 13.84 0.00 36.09 3.13
2431 2735 5.524511 ACGAAACTTTGCAAAAAGGAAAC 57.475 34.783 13.84 1.11 33.69 2.78
2432 2736 4.090786 ACGAAACTTTGCAAAAAGGAAACG 59.909 37.500 13.84 13.73 33.69 3.60
2433 2737 4.491763 CGAAACTTTGCAAAAAGGAAACGG 60.492 41.667 13.84 0.54 33.69 4.44
2440 2744 4.877282 TGCAAAAAGGAAACGGAAATAGG 58.123 39.130 0.00 0.00 0.00 2.57
2445 2749 7.979537 GCAAAAAGGAAACGGAAATAGGATATT 59.020 33.333 0.00 0.00 0.00 1.28
2471 2776 6.952935 TTGTGCAAAAACGAAATACAAACT 57.047 29.167 0.00 0.00 0.00 2.66
2485 2790 7.149192 CGAAATACAAACTGAACATCGTTTTCC 60.149 37.037 0.00 0.00 31.46 3.13
2496 2801 0.871722 TCGTTTTCCGATGCAACAGG 59.128 50.000 0.00 0.00 41.60 4.00
2499 2804 1.336755 GTTTTCCGATGCAACAGGTGT 59.663 47.619 0.00 0.00 0.00 4.16
2507 2812 0.323816 TGCAACAGGTGTGGAAACCA 60.324 50.000 0.00 0.00 43.20 3.67
2509 2814 1.202405 GCAACAGGTGTGGAAACCAAG 60.202 52.381 0.00 0.00 43.20 3.61
2537 2845 8.770850 TTTTTCTGTTAATACGAAACTTTCCG 57.229 30.769 0.00 0.00 31.47 4.30
2539 2847 8.586570 TTTCTGTTAATACGAAACTTTCCGTA 57.413 30.769 0.00 0.00 43.97 4.02
2566 2874 7.801716 ACGTATGAACATATGGCTATTTTGT 57.198 32.000 7.80 0.00 35.21 2.83
2569 2877 7.957484 CGTATGAACATATGGCTATTTTGTAGC 59.043 37.037 7.80 0.00 39.70 3.58
2586 2894 9.651913 ATTTTGTAGCCCAATAAACACATAAAG 57.348 29.630 0.00 0.00 31.81 1.85
2587 2895 7.768807 TTGTAGCCCAATAAACACATAAAGT 57.231 32.000 0.00 0.00 0.00 2.66
2588 2896 8.865420 TTGTAGCCCAATAAACACATAAAGTA 57.135 30.769 0.00 0.00 0.00 2.24
2589 2897 8.865420 TGTAGCCCAATAAACACATAAAGTAA 57.135 30.769 0.00 0.00 0.00 2.24
2612 2920 7.730364 AATTAGTCCCTACAAATAATGAGCG 57.270 36.000 0.00 0.00 0.00 5.03
2621 2929 3.632145 ACAAATAATGAGCGGAATGGACC 59.368 43.478 0.00 0.00 0.00 4.46
2626 2934 4.908601 AATGAGCGGAATGGACCATATA 57.091 40.909 7.59 0.00 0.00 0.86
2627 2935 3.961480 TGAGCGGAATGGACCATATAG 57.039 47.619 7.59 3.11 0.00 1.31
2628 2936 2.567169 TGAGCGGAATGGACCATATAGG 59.433 50.000 7.59 0.00 45.67 2.57
2629 2937 2.832129 GAGCGGAATGGACCATATAGGA 59.168 50.000 7.59 0.00 41.22 2.94
2630 2938 3.452627 GAGCGGAATGGACCATATAGGAT 59.547 47.826 7.59 0.00 41.22 3.24
2631 2939 4.620723 AGCGGAATGGACCATATAGGATA 58.379 43.478 7.59 0.00 41.22 2.59
2632 2940 5.219739 AGCGGAATGGACCATATAGGATAT 58.780 41.667 7.59 0.00 41.22 1.63
2633 2941 6.382087 AGCGGAATGGACCATATAGGATATA 58.618 40.000 7.59 0.00 41.22 0.86
2634 2942 6.495181 AGCGGAATGGACCATATAGGATATAG 59.505 42.308 7.59 0.00 41.22 1.31
2640 2948 6.461451 TGGACCATATAGGATATAGCCCAAT 58.539 40.000 2.64 0.44 41.22 3.16
2650 2958 7.978099 AGGATATAGCCCAATTTCAACTTTT 57.022 32.000 2.64 0.00 0.00 2.27
2651 2959 8.379428 AGGATATAGCCCAATTTCAACTTTTT 57.621 30.769 2.64 0.00 0.00 1.94
2675 2983 6.662865 TTTTGAGACAATAGCCCAATTTCA 57.337 33.333 0.00 0.00 0.00 2.69
2676 2984 6.662865 TTTGAGACAATAGCCCAATTTCAA 57.337 33.333 0.00 0.00 0.00 2.69
2677 2985 5.643379 TGAGACAATAGCCCAATTTCAAC 57.357 39.130 0.00 0.00 0.00 3.18
2678 2986 5.324409 TGAGACAATAGCCCAATTTCAACT 58.676 37.500 0.00 0.00 0.00 3.16
2679 2987 6.480763 TGAGACAATAGCCCAATTTCAACTA 58.519 36.000 0.00 0.00 0.00 2.24
2680 2988 6.374333 TGAGACAATAGCCCAATTTCAACTAC 59.626 38.462 0.00 0.00 0.00 2.73
2681 2989 6.245408 AGACAATAGCCCAATTTCAACTACA 58.755 36.000 0.00 0.00 0.00 2.74
2682 2990 6.891908 AGACAATAGCCCAATTTCAACTACAT 59.108 34.615 0.00 0.00 0.00 2.29
2683 2991 7.067494 AGACAATAGCCCAATTTCAACTACATC 59.933 37.037 0.00 0.00 0.00 3.06
2684 2992 6.891908 ACAATAGCCCAATTTCAACTACATCT 59.108 34.615 0.00 0.00 0.00 2.90
2685 2993 8.052748 ACAATAGCCCAATTTCAACTACATCTA 58.947 33.333 0.00 0.00 0.00 1.98
2686 2994 8.562892 CAATAGCCCAATTTCAACTACATCTAG 58.437 37.037 0.00 0.00 0.00 2.43
2740 3048 2.168313 CCCATATGGCCCAACTTCAAAC 59.832 50.000 16.97 0.00 0.00 2.93
2777 3085 5.005740 TGAGCACTATTGTGATTTGAGCTT 58.994 37.500 11.66 0.00 43.46 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.326789 CCAAAGCACATTAGAAACAGTGTATTG 59.673 37.037 0.00 0.00 34.59 1.90
1 2 7.014230 ACCAAAGCACATTAGAAACAGTGTATT 59.986 33.333 0.00 0.00 34.59 1.89
2 3 6.490040 ACCAAAGCACATTAGAAACAGTGTAT 59.510 34.615 0.00 0.00 34.59 2.29
3 4 5.825679 ACCAAAGCACATTAGAAACAGTGTA 59.174 36.000 0.00 0.00 34.59 2.90
4 5 4.644685 ACCAAAGCACATTAGAAACAGTGT 59.355 37.500 0.00 0.00 34.59 3.55
5 6 5.186996 ACCAAAGCACATTAGAAACAGTG 57.813 39.130 0.00 0.00 35.19 3.66
6 7 5.825679 TGTACCAAAGCACATTAGAAACAGT 59.174 36.000 0.00 0.00 0.00 3.55
7 8 6.312399 TGTACCAAAGCACATTAGAAACAG 57.688 37.500 0.00 0.00 0.00 3.16
8 9 6.488344 TCATGTACCAAAGCACATTAGAAACA 59.512 34.615 0.00 0.00 33.12 2.83
9 10 6.801862 GTCATGTACCAAAGCACATTAGAAAC 59.198 38.462 0.00 0.00 33.12 2.78
10 11 6.348132 CGTCATGTACCAAAGCACATTAGAAA 60.348 38.462 0.00 0.00 33.12 2.52
11 12 5.121611 CGTCATGTACCAAAGCACATTAGAA 59.878 40.000 0.00 0.00 33.12 2.10
12 13 4.629634 CGTCATGTACCAAAGCACATTAGA 59.370 41.667 0.00 0.00 33.12 2.10
13 14 4.629634 TCGTCATGTACCAAAGCACATTAG 59.370 41.667 0.00 0.00 33.12 1.73
14 15 4.570930 TCGTCATGTACCAAAGCACATTA 58.429 39.130 0.00 0.00 33.12 1.90
15 16 3.407698 TCGTCATGTACCAAAGCACATT 58.592 40.909 0.00 0.00 33.12 2.71
16 17 3.052455 TCGTCATGTACCAAAGCACAT 57.948 42.857 0.00 0.00 35.79 3.21
17 18 2.535012 TCGTCATGTACCAAAGCACA 57.465 45.000 0.00 0.00 0.00 4.57
18 19 2.351726 GGATCGTCATGTACCAAAGCAC 59.648 50.000 0.00 0.00 0.00 4.40
19 20 2.627945 GGATCGTCATGTACCAAAGCA 58.372 47.619 0.00 0.00 0.00 3.91
20 21 1.940613 GGGATCGTCATGTACCAAAGC 59.059 52.381 0.00 0.00 0.00 3.51
21 22 3.543680 AGGGATCGTCATGTACCAAAG 57.456 47.619 0.00 0.00 0.00 2.77
22 23 3.605634 CAAGGGATCGTCATGTACCAAA 58.394 45.455 0.00 0.00 0.00 3.28
23 24 2.093181 CCAAGGGATCGTCATGTACCAA 60.093 50.000 0.00 0.00 0.00 3.67
24 25 1.484653 CCAAGGGATCGTCATGTACCA 59.515 52.381 0.00 0.00 0.00 3.25
25 26 1.485066 ACCAAGGGATCGTCATGTACC 59.515 52.381 0.00 0.00 0.00 3.34
26 27 2.981859 ACCAAGGGATCGTCATGTAC 57.018 50.000 0.00 0.00 0.00 2.90
27 28 2.696707 GGTACCAAGGGATCGTCATGTA 59.303 50.000 7.15 0.00 0.00 2.29
28 29 1.485066 GGTACCAAGGGATCGTCATGT 59.515 52.381 7.15 0.00 0.00 3.21
29 30 1.538204 CGGTACCAAGGGATCGTCATG 60.538 57.143 13.54 0.00 0.00 3.07
30 31 0.750850 CGGTACCAAGGGATCGTCAT 59.249 55.000 13.54 0.00 0.00 3.06
31 32 0.323633 TCGGTACCAAGGGATCGTCA 60.324 55.000 13.54 0.00 0.00 4.35
32 33 0.384669 CTCGGTACCAAGGGATCGTC 59.615 60.000 13.54 0.00 0.00 4.20
33 34 1.673808 GCTCGGTACCAAGGGATCGT 61.674 60.000 13.54 0.00 0.00 3.73
34 35 1.067582 GCTCGGTACCAAGGGATCG 59.932 63.158 13.54 0.00 0.00 3.69
35 36 1.067582 CGCTCGGTACCAAGGGATC 59.932 63.158 11.41 0.00 0.00 3.36
36 37 2.432300 CCGCTCGGTACCAAGGGAT 61.432 63.158 18.08 0.00 0.00 3.85
37 38 3.072468 CCGCTCGGTACCAAGGGA 61.072 66.667 18.08 2.79 0.00 4.20
38 39 4.157120 CCCGCTCGGTACCAAGGG 62.157 72.222 13.54 11.62 0.00 3.95
39 40 3.072468 TCCCGCTCGGTACCAAGG 61.072 66.667 13.54 8.71 0.00 3.61
40 41 2.494918 CTCCCGCTCGGTACCAAG 59.505 66.667 13.54 3.53 0.00 3.61
41 42 3.766691 GCTCCCGCTCGGTACCAA 61.767 66.667 13.54 0.00 0.00 3.67
44 45 4.509737 GTGGCTCCCGCTCGGTAC 62.510 72.222 7.59 0.00 36.09 3.34
45 46 3.348554 TAGTGGCTCCCGCTCGGTA 62.349 63.158 7.59 0.00 40.81 4.02
46 47 4.753662 TAGTGGCTCCCGCTCGGT 62.754 66.667 7.59 0.00 40.81 4.69
47 48 4.208686 GTAGTGGCTCCCGCTCGG 62.209 72.222 0.00 0.48 40.81 4.63
48 49 4.208686 GGTAGTGGCTCCCGCTCG 62.209 72.222 0.00 0.00 40.81 5.03
49 50 0.828343 ATAGGTAGTGGCTCCCGCTC 60.828 60.000 0.00 0.00 40.81 5.03
50 51 1.115930 CATAGGTAGTGGCTCCCGCT 61.116 60.000 2.59 2.59 46.90 5.52
51 52 1.367840 CATAGGTAGTGGCTCCCGC 59.632 63.158 0.00 0.00 0.00 6.13
52 53 0.759436 ACCATAGGTAGTGGCTCCCG 60.759 60.000 0.00 0.00 40.49 5.14
53 54 1.049402 GACCATAGGTAGTGGCTCCC 58.951 60.000 0.00 0.00 40.49 4.30
54 55 1.964933 GAGACCATAGGTAGTGGCTCC 59.035 57.143 0.00 0.00 40.49 4.70
55 56 2.625790 CAGAGACCATAGGTAGTGGCTC 59.374 54.545 0.00 0.00 40.49 4.70
56 57 2.672098 CAGAGACCATAGGTAGTGGCT 58.328 52.381 0.00 0.00 40.49 4.75
57 58 1.069358 GCAGAGACCATAGGTAGTGGC 59.931 57.143 0.00 0.00 40.49 5.01
58 59 2.672098 AGCAGAGACCATAGGTAGTGG 58.328 52.381 0.00 0.00 42.55 4.00
59 60 4.720046 TCTAGCAGAGACCATAGGTAGTG 58.280 47.826 0.00 0.00 35.25 2.74
60 61 5.381757 CTTCTAGCAGAGACCATAGGTAGT 58.618 45.833 0.00 0.00 35.25 2.73
61 62 4.764823 CCTTCTAGCAGAGACCATAGGTAG 59.235 50.000 0.00 0.00 35.25 3.18
62 63 4.415846 TCCTTCTAGCAGAGACCATAGGTA 59.584 45.833 0.00 0.00 35.25 3.08
72 73 1.552337 TGCCAAGTCCTTCTAGCAGAG 59.448 52.381 0.00 0.00 32.85 3.35
86 87 7.040409 AGGTTTAGTTGAAGAGTTTATGCCAAG 60.040 37.037 0.00 0.00 0.00 3.61
94 96 3.889538 GCCCAGGTTTAGTTGAAGAGTTT 59.110 43.478 0.00 0.00 0.00 2.66
115 117 3.694538 AACCCGCCCAAGCAATGC 61.695 61.111 0.00 0.00 39.83 3.56
120 122 1.404035 CTTTATACAACCCGCCCAAGC 59.596 52.381 0.00 0.00 0.00 4.01
128 130 2.171237 ACGGTAGGGCTTTATACAACCC 59.829 50.000 0.00 0.00 43.17 4.11
133 135 4.811024 GGTTGTTACGGTAGGGCTTTATAC 59.189 45.833 0.00 0.00 0.00 1.47
144 146 1.542108 CGGGTTTGGGTTGTTACGGTA 60.542 52.381 0.00 0.00 0.00 4.02
149 151 3.920278 AACCGGGTTTGGGTTGTTA 57.080 47.368 6.59 0.00 45.74 2.41
158 160 7.147863 ACAGTTTAATTGTTTAGAACCGGGTTT 60.148 33.333 14.69 0.00 0.00 3.27
160 162 5.829391 ACAGTTTAATTGTTTAGAACCGGGT 59.171 36.000 6.32 0.00 0.00 5.28
249 263 2.172717 GCCCAGAAGCCTGAATTACCTA 59.827 50.000 0.00 0.00 43.02 3.08
280 294 1.944177 TGGGCTCCAGATATAGGCTC 58.056 55.000 0.00 0.00 0.00 4.70
325 339 3.430218 CACATGTTCTCTCTCGGACAAAC 59.570 47.826 0.00 0.00 0.00 2.93
327 341 2.628178 ACACATGTTCTCTCTCGGACAA 59.372 45.455 0.00 0.00 0.00 3.18
328 342 2.239400 ACACATGTTCTCTCTCGGACA 58.761 47.619 0.00 0.00 0.00 4.02
329 343 3.305398 AACACATGTTCTCTCTCGGAC 57.695 47.619 0.00 0.00 31.64 4.79
330 344 4.705023 TGATAACACATGTTCTCTCTCGGA 59.295 41.667 0.00 0.00 39.31 4.55
341 405 3.316029 CGGGAATGCATGATAACACATGT 59.684 43.478 0.00 0.00 46.25 3.21
368 432 1.818674 GACCAGCCCGATGACATTTTT 59.181 47.619 0.00 0.00 0.00 1.94
369 433 1.463674 GACCAGCCCGATGACATTTT 58.536 50.000 0.00 0.00 0.00 1.82
370 434 0.744414 CGACCAGCCCGATGACATTT 60.744 55.000 0.00 0.00 0.00 2.32
371 435 1.153369 CGACCAGCCCGATGACATT 60.153 57.895 0.00 0.00 0.00 2.71
372 436 1.040893 TACGACCAGCCCGATGACAT 61.041 55.000 0.00 0.00 0.00 3.06
373 437 1.252215 TTACGACCAGCCCGATGACA 61.252 55.000 0.00 0.00 0.00 3.58
374 438 0.104304 ATTACGACCAGCCCGATGAC 59.896 55.000 0.00 0.00 0.00 3.06
375 439 1.694844 TATTACGACCAGCCCGATGA 58.305 50.000 0.00 0.00 0.00 2.92
376 440 2.519377 TTATTACGACCAGCCCGATG 57.481 50.000 0.00 0.00 0.00 3.84
377 441 3.118519 ACTTTTATTACGACCAGCCCGAT 60.119 43.478 0.00 0.00 0.00 4.18
378 442 2.234414 ACTTTTATTACGACCAGCCCGA 59.766 45.455 0.00 0.00 0.00 5.14
379 443 2.624636 ACTTTTATTACGACCAGCCCG 58.375 47.619 0.00 0.00 0.00 6.13
380 444 5.362263 TGATACTTTTATTACGACCAGCCC 58.638 41.667 0.00 0.00 0.00 5.19
381 445 8.597662 TTATGATACTTTTATTACGACCAGCC 57.402 34.615 0.00 0.00 0.00 4.85
382 446 8.221766 GCTTATGATACTTTTATTACGACCAGC 58.778 37.037 0.00 0.00 0.00 4.85
383 447 8.425491 CGCTTATGATACTTTTATTACGACCAG 58.575 37.037 0.00 0.00 0.00 4.00
384 448 7.383029 CCGCTTATGATACTTTTATTACGACCA 59.617 37.037 0.00 0.00 0.00 4.02
385 449 7.383300 ACCGCTTATGATACTTTTATTACGACC 59.617 37.037 0.00 0.00 0.00 4.79
386 450 8.290663 ACCGCTTATGATACTTTTATTACGAC 57.709 34.615 0.00 0.00 0.00 4.34
392 456 8.883731 GCATGATACCGCTTATGATACTTTTAT 58.116 33.333 0.00 0.00 0.00 1.40
393 457 7.875554 TGCATGATACCGCTTATGATACTTTTA 59.124 33.333 0.00 0.00 0.00 1.52
394 458 6.710295 TGCATGATACCGCTTATGATACTTTT 59.290 34.615 0.00 0.00 0.00 2.27
395 459 6.230472 TGCATGATACCGCTTATGATACTTT 58.770 36.000 0.00 0.00 0.00 2.66
396 460 5.793817 TGCATGATACCGCTTATGATACTT 58.206 37.500 0.00 0.00 0.00 2.24
397 461 5.405935 TGCATGATACCGCTTATGATACT 57.594 39.130 0.00 0.00 0.00 2.12
398 462 5.503031 GCATGCATGATACCGCTTATGATAC 60.503 44.000 30.64 2.07 0.00 2.24
399 463 4.571984 GCATGCATGATACCGCTTATGATA 59.428 41.667 30.64 0.00 0.00 2.15
400 464 3.376234 GCATGCATGATACCGCTTATGAT 59.624 43.478 30.64 0.00 0.00 2.45
401 465 2.743664 GCATGCATGATACCGCTTATGA 59.256 45.455 30.64 0.00 0.00 2.15
402 466 2.159476 GGCATGCATGATACCGCTTATG 60.159 50.000 30.64 0.23 0.00 1.90
403 467 2.086869 GGCATGCATGATACCGCTTAT 58.913 47.619 30.64 0.00 0.00 1.73
404 468 1.202746 TGGCATGCATGATACCGCTTA 60.203 47.619 30.64 3.36 0.00 3.09
405 469 0.466007 TGGCATGCATGATACCGCTT 60.466 50.000 30.64 0.00 0.00 4.68
406 470 0.466007 TTGGCATGCATGATACCGCT 60.466 50.000 30.64 0.00 0.00 5.52
407 471 0.318107 GTTGGCATGCATGATACCGC 60.318 55.000 30.64 13.32 0.00 5.68
408 472 1.311859 AGTTGGCATGCATGATACCG 58.688 50.000 30.64 2.65 0.00 4.02
409 473 3.499918 GTCTAGTTGGCATGCATGATACC 59.500 47.826 30.64 21.08 0.00 2.73
410 474 4.384056 AGTCTAGTTGGCATGCATGATAC 58.616 43.478 30.64 21.28 0.00 2.24
411 475 4.694760 AGTCTAGTTGGCATGCATGATA 57.305 40.909 30.64 14.66 0.00 2.15
412 476 3.572632 AGTCTAGTTGGCATGCATGAT 57.427 42.857 30.64 11.73 0.00 2.45
413 477 3.354948 AAGTCTAGTTGGCATGCATGA 57.645 42.857 30.64 7.50 0.00 3.07
414 478 4.445452 AAAAGTCTAGTTGGCATGCATG 57.555 40.909 22.70 22.70 0.00 4.06
415 479 4.523943 TCAAAAAGTCTAGTTGGCATGCAT 59.476 37.500 21.36 4.57 0.00 3.96
416 480 3.888323 TCAAAAAGTCTAGTTGGCATGCA 59.112 39.130 21.36 2.54 0.00 3.96
417 481 4.503741 TCAAAAAGTCTAGTTGGCATGC 57.496 40.909 9.90 9.90 0.00 4.06
418 482 6.680810 TCATTCAAAAAGTCTAGTTGGCATG 58.319 36.000 0.00 0.00 0.00 4.06
419 483 6.899393 TCATTCAAAAAGTCTAGTTGGCAT 57.101 33.333 0.00 0.00 0.00 4.40
420 484 6.265196 ACATCATTCAAAAAGTCTAGTTGGCA 59.735 34.615 0.00 0.00 0.00 4.92
421 485 6.583806 CACATCATTCAAAAAGTCTAGTTGGC 59.416 38.462 0.00 0.00 0.00 4.52
422 486 7.086376 CCACATCATTCAAAAAGTCTAGTTGG 58.914 38.462 0.00 0.00 0.00 3.77
423 487 6.583806 GCCACATCATTCAAAAAGTCTAGTTG 59.416 38.462 0.00 0.00 0.00 3.16
424 488 6.265196 TGCCACATCATTCAAAAAGTCTAGTT 59.735 34.615 0.00 0.00 0.00 2.24
425 489 5.769662 TGCCACATCATTCAAAAAGTCTAGT 59.230 36.000 0.00 0.00 0.00 2.57
426 490 6.088824 GTGCCACATCATTCAAAAAGTCTAG 58.911 40.000 0.00 0.00 0.00 2.43
427 491 5.534278 TGTGCCACATCATTCAAAAAGTCTA 59.466 36.000 0.00 0.00 0.00 2.59
428 492 4.341806 TGTGCCACATCATTCAAAAAGTCT 59.658 37.500 0.00 0.00 0.00 3.24
429 493 4.619973 TGTGCCACATCATTCAAAAAGTC 58.380 39.130 0.00 0.00 0.00 3.01
430 494 4.669206 TGTGCCACATCATTCAAAAAGT 57.331 36.364 0.00 0.00 0.00 2.66
431 495 7.837202 ATTATGTGCCACATCATTCAAAAAG 57.163 32.000 14.74 0.00 39.88 2.27
432 496 9.716531 TTAATTATGTGCCACATCATTCAAAAA 57.283 25.926 17.95 6.94 39.88 1.94
433 497 9.716531 TTTAATTATGTGCCACATCATTCAAAA 57.283 25.926 17.95 12.35 39.88 2.44
434 498 9.887629 ATTTAATTATGTGCCACATCATTCAAA 57.112 25.926 17.95 15.84 39.88 2.69
435 499 9.315525 CATTTAATTATGTGCCACATCATTCAA 57.684 29.630 17.95 14.54 39.88 2.69
436 500 8.693625 TCATTTAATTATGTGCCACATCATTCA 58.306 29.630 17.95 7.36 39.88 2.57
437 501 9.188588 CTCATTTAATTATGTGCCACATCATTC 57.811 33.333 17.95 0.00 39.88 2.67
438 502 8.916062 TCTCATTTAATTATGTGCCACATCATT 58.084 29.630 14.74 16.94 39.88 2.57
439 503 8.467963 TCTCATTTAATTATGTGCCACATCAT 57.532 30.769 14.74 6.10 39.88 2.45
440 504 7.878547 TCTCATTTAATTATGTGCCACATCA 57.121 32.000 14.74 3.46 39.88 3.07
441 505 9.585099 TTTTCTCATTTAATTATGTGCCACATC 57.415 29.630 14.74 0.00 39.88 3.06
442 506 9.941325 TTTTTCTCATTTAATTATGTGCCACAT 57.059 25.926 15.69 15.69 42.35 3.21
465 529 6.969043 TGATATGATACCACACCCTCTTTTT 58.031 36.000 0.00 0.00 0.00 1.94
466 530 6.575244 TGATATGATACCACACCCTCTTTT 57.425 37.500 0.00 0.00 0.00 2.27
467 531 6.329986 TCATGATATGATACCACACCCTCTTT 59.670 38.462 0.00 0.00 33.59 2.52
468 532 5.846164 TCATGATATGATACCACACCCTCTT 59.154 40.000 0.00 0.00 33.59 2.85
469 533 5.406163 TCATGATATGATACCACACCCTCT 58.594 41.667 0.00 0.00 33.59 3.69
470 534 5.745312 TCATGATATGATACCACACCCTC 57.255 43.478 0.00 0.00 33.59 4.30
510 574 9.830975 ACATGCATGACACAAAGTAGTATAATA 57.169 29.630 32.75 0.00 0.00 0.98
511 575 8.737168 ACATGCATGACACAAAGTAGTATAAT 57.263 30.769 32.75 0.57 0.00 1.28
512 576 7.821846 TGACATGCATGACACAAAGTAGTATAA 59.178 33.333 32.75 2.97 0.00 0.98
513 577 7.327214 TGACATGCATGACACAAAGTAGTATA 58.673 34.615 32.75 3.41 0.00 1.47
514 578 6.172630 TGACATGCATGACACAAAGTAGTAT 58.827 36.000 32.75 4.97 0.00 2.12
515 579 5.546526 TGACATGCATGACACAAAGTAGTA 58.453 37.500 32.75 4.14 0.00 1.82
516 580 4.388485 TGACATGCATGACACAAAGTAGT 58.612 39.130 32.75 5.67 0.00 2.73
517 581 5.361135 TTGACATGCATGACACAAAGTAG 57.639 39.130 32.75 1.99 32.58 2.57
518 582 5.963176 ATTGACATGCATGACACAAAGTA 57.037 34.783 32.75 16.33 32.58 2.24
519 583 4.859304 ATTGACATGCATGACACAAAGT 57.141 36.364 32.75 16.54 32.58 2.66
520 584 7.821595 ATTAATTGACATGCATGACACAAAG 57.178 32.000 32.75 4.14 32.58 2.77
521 585 9.356433 CTTATTAATTGACATGCATGACACAAA 57.644 29.630 32.75 22.79 32.58 2.83
522 586 7.975058 CCTTATTAATTGACATGCATGACACAA 59.025 33.333 32.75 28.68 32.58 3.33
523 587 7.482474 CCTTATTAATTGACATGCATGACACA 58.518 34.615 32.75 23.32 32.58 3.72
524 588 6.418819 GCCTTATTAATTGACATGCATGACAC 59.581 38.462 32.75 21.26 32.58 3.67
525 589 6.461370 GGCCTTATTAATTGACATGCATGACA 60.461 38.462 32.75 28.48 0.00 3.58
526 590 5.922544 GGCCTTATTAATTGACATGCATGAC 59.077 40.000 32.75 26.17 0.00 3.06
527 591 5.597594 TGGCCTTATTAATTGACATGCATGA 59.402 36.000 32.75 11.53 0.00 3.07
528 592 5.693104 GTGGCCTTATTAATTGACATGCATG 59.307 40.000 25.09 25.09 0.00 4.06
529 593 5.221501 GGTGGCCTTATTAATTGACATGCAT 60.222 40.000 3.32 0.00 0.00 3.96
530 594 4.099266 GGTGGCCTTATTAATTGACATGCA 59.901 41.667 3.32 0.00 0.00 3.96
531 595 4.342092 AGGTGGCCTTATTAATTGACATGC 59.658 41.667 3.32 0.00 0.00 4.06
532 596 7.581213 TTAGGTGGCCTTATTAATTGACATG 57.419 36.000 3.32 0.00 34.61 3.21
533 597 9.875708 TTATTAGGTGGCCTTATTAATTGACAT 57.124 29.630 3.32 0.00 34.61 3.06
534 598 9.349713 CTTATTAGGTGGCCTTATTAATTGACA 57.650 33.333 3.32 0.00 34.61 3.58
535 599 9.569122 TCTTATTAGGTGGCCTTATTAATTGAC 57.431 33.333 3.32 0.00 34.61 3.18
543 607 9.617053 AGTTAGTATCTTATTAGGTGGCCTTAT 57.383 33.333 3.32 0.00 34.61 1.73
544 608 9.443365 AAGTTAGTATCTTATTAGGTGGCCTTA 57.557 33.333 3.32 0.00 34.61 2.69
545 609 7.932683 AGTTAGTATCTTATTAGGTGGCCTT 57.067 36.000 3.32 0.00 34.61 4.35
546 610 7.932683 AAGTTAGTATCTTATTAGGTGGCCT 57.067 36.000 3.32 0.00 37.71 5.19
547 611 9.654663 CATAAGTTAGTATCTTATTAGGTGGCC 57.345 37.037 9.78 0.00 36.39 5.36
576 640 7.492669 GCATCCGTACTTATCATAATGCATAGT 59.507 37.037 0.00 0.00 38.44 2.12
577 641 7.492344 TGCATCCGTACTTATCATAATGCATAG 59.508 37.037 0.00 0.00 42.20 2.23
578 642 7.327214 TGCATCCGTACTTATCATAATGCATA 58.673 34.615 0.00 0.00 42.20 3.14
579 643 6.172630 TGCATCCGTACTTATCATAATGCAT 58.827 36.000 0.00 0.00 42.20 3.96
580 644 5.546526 TGCATCCGTACTTATCATAATGCA 58.453 37.500 2.81 2.81 44.13 3.96
581 645 6.481134 CATGCATCCGTACTTATCATAATGC 58.519 40.000 0.00 0.00 38.90 3.56
582 646 6.092533 TGCATGCATCCGTACTTATCATAATG 59.907 38.462 18.46 0.00 0.00 1.90
583 647 6.092670 GTGCATGCATCCGTACTTATCATAAT 59.907 38.462 25.64 0.00 0.00 1.28
584 648 5.408299 GTGCATGCATCCGTACTTATCATAA 59.592 40.000 25.64 0.00 0.00 1.90
585 649 4.929211 GTGCATGCATCCGTACTTATCATA 59.071 41.667 25.64 0.00 0.00 2.15
586 650 3.748048 GTGCATGCATCCGTACTTATCAT 59.252 43.478 25.64 0.00 0.00 2.45
587 651 3.130633 GTGCATGCATCCGTACTTATCA 58.869 45.455 25.64 0.00 0.00 2.15
588 652 3.130633 TGTGCATGCATCCGTACTTATC 58.869 45.455 25.64 6.62 0.00 1.75
589 653 3.192541 TGTGCATGCATCCGTACTTAT 57.807 42.857 25.64 0.00 0.00 1.73
590 654 2.682155 TGTGCATGCATCCGTACTTA 57.318 45.000 25.64 0.00 0.00 2.24
591 655 2.042686 ATGTGCATGCATCCGTACTT 57.957 45.000 25.64 4.97 0.00 2.24
592 656 2.908688 TATGTGCATGCATCCGTACT 57.091 45.000 25.64 6.26 0.00 2.73
593 657 3.329386 AGATATGTGCATGCATCCGTAC 58.671 45.455 25.64 10.35 0.00 3.67
594 658 3.006752 TGAGATATGTGCATGCATCCGTA 59.993 43.478 25.64 17.30 0.00 4.02
595 659 2.224354 TGAGATATGTGCATGCATCCGT 60.224 45.455 25.64 15.58 0.00 4.69
596 660 2.415512 CTGAGATATGTGCATGCATCCG 59.584 50.000 25.64 8.66 0.00 4.18
708 779 4.094739 ACGTGTAAAATTAATGTACGGGCC 59.905 41.667 0.00 0.00 34.69 5.80
771 860 3.887621 TCACCAGCAGAGGTACAATAC 57.112 47.619 0.00 0.00 40.77 1.89
895 997 5.538849 TGCATTGCACATCCATCATTTAT 57.461 34.783 7.38 0.00 31.71 1.40
958 1065 1.128724 TTTGTGAAAACGTGCGTGCG 61.129 50.000 0.00 0.00 37.94 5.34
959 1066 1.187055 GATTTGTGAAAACGTGCGTGC 59.813 47.619 0.00 0.00 0.00 5.34
960 1067 2.213131 GTGATTTGTGAAAACGTGCGTG 59.787 45.455 0.00 0.00 0.00 5.34
961 1068 2.159503 TGTGATTTGTGAAAACGTGCGT 60.160 40.909 0.00 0.00 0.00 5.24
1295 1462 3.891586 GACGCGTCCAGTTCGAGCA 62.892 63.158 28.61 0.00 0.00 4.26
1377 1544 0.798776 CCAAGAACACGCTCACCATC 59.201 55.000 0.00 0.00 0.00 3.51
1379 1546 0.249868 CTCCAAGAACACGCTCACCA 60.250 55.000 0.00 0.00 0.00 4.17
1448 1618 0.823769 CTCCATCTCCATCCCGTCGA 60.824 60.000 0.00 0.00 0.00 4.20
1811 2021 1.469703 CGGAACATGCATGTGTGTGAT 59.530 47.619 31.98 15.95 41.61 3.06
1812 2022 0.873721 CGGAACATGCATGTGTGTGA 59.126 50.000 31.98 0.00 41.61 3.58
1834 2052 5.819379 TCAATGCAGATCTGTAAACCTGATC 59.181 40.000 23.38 3.85 44.58 2.92
1886 2116 7.258441 CACGAAAGAAATGATAGAGTGGAGTA 58.742 38.462 0.00 0.00 0.00 2.59
1891 2137 5.784750 TGCACGAAAGAAATGATAGAGTG 57.215 39.130 0.00 0.00 0.00 3.51
1892 2138 6.801539 TTTGCACGAAAGAAATGATAGAGT 57.198 33.333 0.00 0.00 0.00 3.24
1893 2139 7.219535 CCAATTTGCACGAAAGAAATGATAGAG 59.780 37.037 0.00 0.00 0.00 2.43
1894 2140 7.028962 CCAATTTGCACGAAAGAAATGATAGA 58.971 34.615 0.00 0.00 0.00 1.98
1895 2141 6.808212 ACCAATTTGCACGAAAGAAATGATAG 59.192 34.615 0.00 0.00 0.00 2.08
1961 2217 3.633986 CCCAACAAATAGGATCTTCAGGC 59.366 47.826 0.00 0.00 0.00 4.85
2020 2277 6.757010 TCAGAGACGCAAAGTTAGGATTAATC 59.243 38.462 6.93 6.93 0.00 1.75
2021 2278 6.535508 GTCAGAGACGCAAAGTTAGGATTAAT 59.464 38.462 0.00 0.00 0.00 1.40
2022 2279 5.867716 GTCAGAGACGCAAAGTTAGGATTAA 59.132 40.000 0.00 0.00 0.00 1.40
2023 2280 5.185249 AGTCAGAGACGCAAAGTTAGGATTA 59.815 40.000 0.00 0.00 37.67 1.75
2024 2281 4.021016 AGTCAGAGACGCAAAGTTAGGATT 60.021 41.667 0.00 0.00 37.67 3.01
2025 2282 3.511934 AGTCAGAGACGCAAAGTTAGGAT 59.488 43.478 0.00 0.00 37.67 3.24
2026 2283 2.891580 AGTCAGAGACGCAAAGTTAGGA 59.108 45.455 0.00 0.00 37.67 2.94
2027 2284 3.305398 AGTCAGAGACGCAAAGTTAGG 57.695 47.619 0.00 0.00 37.67 2.69
2054 2326 3.250040 CCCCGATTGTTCCGTTGATAATC 59.750 47.826 0.00 0.00 0.00 1.75
2141 2434 7.289326 ACCATTTTCCCCTGCTCATATATAT 57.711 36.000 0.00 0.00 0.00 0.86
2192 2495 2.634639 TACCCCTAAAGTGGAGAGCA 57.365 50.000 0.00 0.00 0.00 4.26
2204 2507 6.939730 TCGTATTACGTATGAACATACCCCTA 59.060 38.462 15.31 4.38 43.14 3.53
2206 2509 6.012658 TCGTATTACGTATGAACATACCCC 57.987 41.667 15.31 0.00 43.14 4.95
2208 2511 7.804600 TCACATCGTATTACGTATGAACATACC 59.195 37.037 23.24 3.94 43.14 2.73
2210 2513 9.902196 AATCACATCGTATTACGTATGAACATA 57.098 29.630 23.24 4.15 43.14 2.29
2213 2516 8.537223 ACAAATCACATCGTATTACGTATGAAC 58.463 33.333 23.24 0.00 43.14 3.18
2214 2517 8.536407 CACAAATCACATCGTATTACGTATGAA 58.464 33.333 23.24 15.70 43.14 2.57
2216 2519 8.056710 TCACAAATCACATCGTATTACGTATG 57.943 34.615 15.31 17.30 43.14 2.39
2217 2520 8.637281 TTCACAAATCACATCGTATTACGTAT 57.363 30.769 15.31 5.88 43.14 3.06
2218 2521 8.536407 CATTCACAAATCACATCGTATTACGTA 58.464 33.333 15.31 0.00 43.14 3.57
2220 2523 6.354362 GCATTCACAAATCACATCGTATTACG 59.646 38.462 9.95 9.95 44.19 3.18
2221 2524 6.632834 GGCATTCACAAATCACATCGTATTAC 59.367 38.462 0.00 0.00 0.00 1.89
2223 2526 5.125257 TGGCATTCACAAATCACATCGTATT 59.875 36.000 0.00 0.00 0.00 1.89
2225 2528 4.006319 TGGCATTCACAAATCACATCGTA 58.994 39.130 0.00 0.00 0.00 3.43
2226 2529 2.819019 TGGCATTCACAAATCACATCGT 59.181 40.909 0.00 0.00 0.00 3.73
2229 2532 2.557924 ACGTGGCATTCACAAATCACAT 59.442 40.909 0.00 0.00 46.36 3.21
2230 2533 1.952990 ACGTGGCATTCACAAATCACA 59.047 42.857 0.00 0.00 46.36 3.58
2231 2534 2.287547 ACACGTGGCATTCACAAATCAC 60.288 45.455 21.57 0.00 46.36 3.06
2232 2535 1.952990 ACACGTGGCATTCACAAATCA 59.047 42.857 21.57 0.00 46.36 2.57
2233 2536 2.031245 TGACACGTGGCATTCACAAATC 60.031 45.455 23.03 3.54 46.36 2.17
2234 2537 1.952990 TGACACGTGGCATTCACAAAT 59.047 42.857 23.03 0.00 46.36 2.32
2236 2539 1.535028 GATGACACGTGGCATTCACAA 59.465 47.619 36.07 8.22 45.42 3.33
2237 2540 1.155889 GATGACACGTGGCATTCACA 58.844 50.000 36.07 9.07 45.42 3.58
2238 2541 0.447801 GGATGACACGTGGCATTCAC 59.552 55.000 36.07 24.74 45.42 3.18
2239 2542 0.036022 TGGATGACACGTGGCATTCA 59.964 50.000 36.64 36.64 46.54 2.57
2240 2543 1.331756 GATGGATGACACGTGGCATTC 59.668 52.381 36.07 34.16 45.42 2.67
2243 2546 0.391528 CTGATGGATGACACGTGGCA 60.392 55.000 29.28 29.28 37.54 4.92
2244 2547 1.091771 CCTGATGGATGACACGTGGC 61.092 60.000 21.57 19.24 34.57 5.01
2245 2548 0.536724 TCCTGATGGATGACACGTGG 59.463 55.000 21.57 1.66 37.46 4.94
2256 2559 0.176449 TGTGAGACGCATCCTGATGG 59.824 55.000 9.07 2.45 39.16 3.51
2257 2560 2.235845 ATGTGAGACGCATCCTGATG 57.764 50.000 2.72 2.72 41.60 3.07
2258 2561 4.613925 AATATGTGAGACGCATCCTGAT 57.386 40.909 1.08 0.00 36.02 2.90
2259 2562 5.289595 GTTAATATGTGAGACGCATCCTGA 58.710 41.667 1.08 0.00 36.02 3.86
2260 2563 4.449068 GGTTAATATGTGAGACGCATCCTG 59.551 45.833 1.08 0.00 36.02 3.86
2261 2564 4.632153 GGTTAATATGTGAGACGCATCCT 58.368 43.478 1.08 0.00 36.02 3.24
2262 2565 3.428870 CGGTTAATATGTGAGACGCATCC 59.571 47.826 1.08 0.00 36.02 3.51
2263 2566 4.049186 ACGGTTAATATGTGAGACGCATC 58.951 43.478 1.08 0.00 36.02 3.91
2264 2567 3.802139 CACGGTTAATATGTGAGACGCAT 59.198 43.478 0.00 0.00 38.23 4.73
2265 2568 3.119424 TCACGGTTAATATGTGAGACGCA 60.119 43.478 4.00 0.00 37.69 5.24
2266 2569 3.441163 TCACGGTTAATATGTGAGACGC 58.559 45.455 4.00 0.00 37.69 5.19
2271 2574 4.142026 CCAGGTCTCACGGTTAATATGTGA 60.142 45.833 7.05 7.05 40.12 3.58
2272 2575 4.119862 CCAGGTCTCACGGTTAATATGTG 58.880 47.826 0.00 0.00 34.96 3.21
2273 2576 3.773119 ACCAGGTCTCACGGTTAATATGT 59.227 43.478 0.00 0.00 0.00 2.29
2274 2577 4.099573 AGACCAGGTCTCACGGTTAATATG 59.900 45.833 17.31 0.00 38.71 1.78
2275 2578 4.287552 AGACCAGGTCTCACGGTTAATAT 58.712 43.478 17.31 0.00 38.71 1.28
2276 2579 3.705051 AGACCAGGTCTCACGGTTAATA 58.295 45.455 17.31 0.00 38.71 0.98
2277 2580 2.537143 AGACCAGGTCTCACGGTTAAT 58.463 47.619 17.31 0.00 38.71 1.40
2278 2581 2.005370 AGACCAGGTCTCACGGTTAA 57.995 50.000 17.31 0.00 38.71 2.01
2279 2582 3.759865 AGACCAGGTCTCACGGTTA 57.240 52.632 17.31 0.00 38.71 2.85
2280 2583 4.621269 AGACCAGGTCTCACGGTT 57.379 55.556 17.31 0.00 38.71 4.44
2307 2610 2.307686 AGCTTACCCCAGATCGGAAAAA 59.692 45.455 5.32 0.00 36.56 1.94
2308 2611 1.913419 AGCTTACCCCAGATCGGAAAA 59.087 47.619 5.32 0.00 36.56 2.29
2309 2612 1.209504 CAGCTTACCCCAGATCGGAAA 59.790 52.381 5.32 0.00 36.56 3.13
2310 2613 0.830648 CAGCTTACCCCAGATCGGAA 59.169 55.000 5.32 0.00 36.56 4.30
2311 2614 1.048724 CCAGCTTACCCCAGATCGGA 61.049 60.000 5.32 0.00 36.56 4.55
2312 2615 1.447643 CCAGCTTACCCCAGATCGG 59.552 63.158 0.00 0.00 0.00 4.18
2313 2616 1.227674 GCCAGCTTACCCCAGATCG 60.228 63.158 0.00 0.00 0.00 3.69
2314 2617 1.227674 CGCCAGCTTACCCCAGATC 60.228 63.158 0.00 0.00 0.00 2.75
2315 2618 0.689745 TACGCCAGCTTACCCCAGAT 60.690 55.000 0.00 0.00 0.00 2.90
2316 2619 1.305465 TACGCCAGCTTACCCCAGA 60.305 57.895 0.00 0.00 0.00 3.86
2317 2620 1.144057 CTACGCCAGCTTACCCCAG 59.856 63.158 0.00 0.00 0.00 4.45
2318 2621 2.363975 CCTACGCCAGCTTACCCCA 61.364 63.158 0.00 0.00 0.00 4.96
2319 2622 2.504519 CCTACGCCAGCTTACCCC 59.495 66.667 0.00 0.00 0.00 4.95
2331 2634 1.867233 CGCTCCATTTTCATCCCTACG 59.133 52.381 0.00 0.00 0.00 3.51
2332 2635 2.158813 TCCGCTCCATTTTCATCCCTAC 60.159 50.000 0.00 0.00 0.00 3.18
2335 2638 1.762708 TTCCGCTCCATTTTCATCCC 58.237 50.000 0.00 0.00 0.00 3.85
2358 2661 2.859165 TTTCTGTCAGAAAGGCGGAT 57.141 45.000 21.59 0.00 39.13 4.18
2369 2672 7.931578 TCCTCTAGTTTTTGTTTTTCTGTCA 57.068 32.000 0.00 0.00 0.00 3.58
2371 2674 9.990360 TTTTTCCTCTAGTTTTTGTTTTTCTGT 57.010 25.926 0.00 0.00 0.00 3.41
2373 2676 9.135843 CGTTTTTCCTCTAGTTTTTGTTTTTCT 57.864 29.630 0.00 0.00 0.00 2.52
2381 2684 7.068962 TCCATTTCCGTTTTTCCTCTAGTTTTT 59.931 33.333 0.00 0.00 0.00 1.94
2383 2686 6.066032 TCCATTTCCGTTTTTCCTCTAGTTT 58.934 36.000 0.00 0.00 0.00 2.66
2406 2710 5.771602 TCCTTTTTGCAAAGTTTCGTTTC 57.228 34.783 12.41 0.00 38.22 2.78
2412 2716 4.570930 TCCGTTTCCTTTTTGCAAAGTTT 58.429 34.783 12.41 0.00 38.22 2.66
2414 2718 3.878160 TCCGTTTCCTTTTTGCAAAGT 57.122 38.095 12.41 0.00 38.22 2.66
2415 2719 5.733226 ATTTCCGTTTCCTTTTTGCAAAG 57.267 34.783 12.41 1.19 39.45 2.77
2416 2720 5.755861 CCTATTTCCGTTTCCTTTTTGCAAA 59.244 36.000 8.05 8.05 0.00 3.68
2417 2721 5.069251 TCCTATTTCCGTTTCCTTTTTGCAA 59.931 36.000 0.00 0.00 0.00 4.08
2418 2722 4.585162 TCCTATTTCCGTTTCCTTTTTGCA 59.415 37.500 0.00 0.00 0.00 4.08
2419 2723 5.128992 TCCTATTTCCGTTTCCTTTTTGC 57.871 39.130 0.00 0.00 0.00 3.68
2420 2724 9.869757 AAATATCCTATTTCCGTTTCCTTTTTG 57.130 29.630 0.00 0.00 0.00 2.44
2445 2749 8.283291 AGTTTGTATTTCGTTTTTGCACAAAAA 58.717 25.926 15.40 15.40 44.98 1.94
2454 2758 7.698970 ACGATGTTCAGTTTGTATTTCGTTTTT 59.301 29.630 0.00 0.00 33.99 1.94
2455 2759 7.190871 ACGATGTTCAGTTTGTATTTCGTTTT 58.809 30.769 0.00 0.00 33.99 2.43
2461 2765 7.924103 GGAAAACGATGTTCAGTTTGTATTT 57.076 32.000 0.00 0.00 40.07 1.40
2485 2790 0.950836 TTTCCACACCTGTTGCATCG 59.049 50.000 0.00 0.00 0.00 3.84
2487 2792 1.039856 GGTTTCCACACCTGTTGCAT 58.960 50.000 0.00 0.00 33.50 3.96
2490 2795 2.099405 ACTTGGTTTCCACACCTGTTG 58.901 47.619 0.00 0.00 37.75 3.33
2543 2851 7.957484 GCTACAAAATAGCCATATGTTCATACG 59.043 37.037 1.24 0.00 34.65 3.06
2585 2893 9.780186 GCTCATTATTTGTAGGGACTAATTACT 57.220 33.333 0.00 0.00 45.48 2.24
2586 2894 8.709646 CGCTCATTATTTGTAGGGACTAATTAC 58.290 37.037 0.00 0.00 45.48 1.89
2587 2895 7.876068 CCGCTCATTATTTGTAGGGACTAATTA 59.124 37.037 0.00 0.00 45.48 1.40
2588 2896 6.710744 CCGCTCATTATTTGTAGGGACTAATT 59.289 38.462 0.00 0.00 45.48 1.40
2589 2897 6.042781 TCCGCTCATTATTTGTAGGGACTAAT 59.957 38.462 0.00 0.00 45.48 1.73
2602 2910 3.576078 TGGTCCATTCCGCTCATTATT 57.424 42.857 0.00 0.00 0.00 1.40
2612 2920 6.013293 GGGCTATATCCTATATGGTCCATTCC 60.013 46.154 10.33 0.00 37.07 3.01
2621 2929 9.911788 AGTTGAAATTGGGCTATATCCTATATG 57.088 33.333 0.00 0.00 0.00 1.78
2626 2934 7.978099 AAAAGTTGAAATTGGGCTATATCCT 57.022 32.000 0.00 0.00 0.00 3.24
2651 2959 7.060383 TGAAATTGGGCTATTGTCTCAAAAA 57.940 32.000 0.00 0.00 0.00 1.94
2653 2961 6.267471 AGTTGAAATTGGGCTATTGTCTCAAA 59.733 34.615 0.00 0.00 0.00 2.69
2654 2962 5.774690 AGTTGAAATTGGGCTATTGTCTCAA 59.225 36.000 0.00 0.00 0.00 3.02
2656 2964 5.904362 AGTTGAAATTGGGCTATTGTCTC 57.096 39.130 0.00 0.00 0.00 3.36
2657 2965 6.245408 TGTAGTTGAAATTGGGCTATTGTCT 58.755 36.000 0.00 0.00 0.00 3.41
2658 2966 6.509418 TGTAGTTGAAATTGGGCTATTGTC 57.491 37.500 0.00 0.00 0.00 3.18
2662 2970 6.712547 GCTAGATGTAGTTGAAATTGGGCTAT 59.287 38.462 0.00 0.00 0.00 2.97
2663 2971 6.055588 GCTAGATGTAGTTGAAATTGGGCTA 58.944 40.000 0.00 0.00 0.00 3.93
2664 2972 4.884164 GCTAGATGTAGTTGAAATTGGGCT 59.116 41.667 0.00 0.00 0.00 5.19
2665 2973 4.640201 TGCTAGATGTAGTTGAAATTGGGC 59.360 41.667 0.00 0.00 0.00 5.36
2666 2974 5.220662 CGTGCTAGATGTAGTTGAAATTGGG 60.221 44.000 0.00 0.00 0.00 4.12
2667 2975 5.580691 TCGTGCTAGATGTAGTTGAAATTGG 59.419 40.000 0.00 0.00 0.00 3.16
2668 2976 6.090763 TGTCGTGCTAGATGTAGTTGAAATTG 59.909 38.462 0.00 0.00 0.00 2.32
2669 2977 6.163476 TGTCGTGCTAGATGTAGTTGAAATT 58.837 36.000 0.00 0.00 0.00 1.82
2670 2978 5.720202 TGTCGTGCTAGATGTAGTTGAAAT 58.280 37.500 0.00 0.00 0.00 2.17
2671 2979 5.128992 TGTCGTGCTAGATGTAGTTGAAA 57.871 39.130 0.00 0.00 0.00 2.69
2672 2980 4.733850 CTGTCGTGCTAGATGTAGTTGAA 58.266 43.478 0.00 0.00 0.00 2.69
2673 2981 3.427638 GCTGTCGTGCTAGATGTAGTTGA 60.428 47.826 0.00 0.00 0.00 3.18
2674 2982 2.854777 GCTGTCGTGCTAGATGTAGTTG 59.145 50.000 0.00 0.00 0.00 3.16
2675 2983 2.159226 GGCTGTCGTGCTAGATGTAGTT 60.159 50.000 0.00 0.00 0.00 2.24
2676 2984 1.405821 GGCTGTCGTGCTAGATGTAGT 59.594 52.381 0.00 0.00 0.00 2.73
2677 2985 1.678627 AGGCTGTCGTGCTAGATGTAG 59.321 52.381 0.00 0.00 0.00 2.74
2678 2986 1.763968 AGGCTGTCGTGCTAGATGTA 58.236 50.000 0.00 0.00 0.00 2.29
2679 2987 1.763968 TAGGCTGTCGTGCTAGATGT 58.236 50.000 0.00 0.00 0.00 3.06
2680 2988 2.871182 TTAGGCTGTCGTGCTAGATG 57.129 50.000 0.00 0.00 0.00 2.90
2681 2989 3.256136 GGTATTAGGCTGTCGTGCTAGAT 59.744 47.826 0.00 0.00 0.00 1.98
2682 2990 2.621998 GGTATTAGGCTGTCGTGCTAGA 59.378 50.000 0.00 0.00 0.00 2.43
2683 2991 2.623889 AGGTATTAGGCTGTCGTGCTAG 59.376 50.000 0.00 0.00 0.00 3.42
2684 2992 2.662866 AGGTATTAGGCTGTCGTGCTA 58.337 47.619 0.00 0.00 0.00 3.49
2685 2993 1.486211 AGGTATTAGGCTGTCGTGCT 58.514 50.000 0.00 0.00 0.00 4.40
2686 2994 3.447918 TTAGGTATTAGGCTGTCGTGC 57.552 47.619 0.00 0.00 0.00 5.34
2740 3048 2.035193 AGTGCTCATACCAGCGACATAG 59.965 50.000 0.00 0.00 42.92 2.23
2777 3085 4.213694 GGCATCAAACAATCAAACATTGCA 59.786 37.500 0.00 0.00 32.55 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.