Multiple sequence alignment - TraesCS5A01G471200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G471200 chr5A 100.000 2720 0 0 1 2720 647809669 647806950 0.000000e+00 5024.0
1 TraesCS5A01G471200 chr5A 88.337 523 55 6 1 521 647610229 647609711 8.270000e-175 623.0
2 TraesCS5A01G471200 chr5A 88.915 424 27 14 1737 2148 647590026 647589611 3.130000e-139 505.0
3 TraesCS5A01G471200 chr5A 87.943 423 25 12 1087 1487 647607166 647606748 2.450000e-130 475.0
4 TraesCS5A01G471200 chr5A 89.202 213 18 3 1427 1638 647606730 647606522 7.470000e-66 261.0
5 TraesCS5A01G471200 chr5A 81.571 331 18 11 653 949 647607594 647607273 1.630000e-57 233.0
6 TraesCS5A01G471200 chr5A 88.095 126 12 3 2104 2228 647549322 647549199 2.180000e-31 147.0
7 TraesCS5A01G471200 chr5A 94.366 71 4 0 510 580 647607943 647607873 2.860000e-20 110.0
8 TraesCS5A01G471200 chr5D 92.253 1407 64 22 769 2148 520284064 520282676 0.000000e+00 1953.0
9 TraesCS5A01G471200 chr5D 96.250 240 7 2 2215 2453 55540232 55539994 2.540000e-105 392.0
10 TraesCS5A01G471200 chr5D 95.708 233 7 3 2216 2447 276471647 276471417 3.310000e-99 372.0
11 TraesCS5A01G471200 chr5D 91.057 123 11 0 2533 2655 520282291 520282169 1.680000e-37 167.0
12 TraesCS5A01G471200 chrUn 92.040 1407 72 19 756 2147 311502969 311504350 0.000000e+00 1941.0
13 TraesCS5A01G471200 chrUn 87.705 122 13 1 2534 2655 311504709 311504828 1.020000e-29 141.0
14 TraesCS5A01G471200 chr6A 96.610 236 7 1 2216 2450 475099156 475099391 9.130000e-105 390.0
15 TraesCS5A01G471200 chr6A 86.842 76 8 2 2551 2626 2412156 2412083 1.740000e-12 84.2
16 TraesCS5A01G471200 chr7D 95.816 239 7 3 2216 2453 18022003 18021767 1.530000e-102 383.0
17 TraesCS5A01G471200 chr7D 95.763 236 8 2 2216 2450 156814684 156814918 1.980000e-101 379.0
18 TraesCS5A01G471200 chr7D 95.763 236 7 3 2216 2450 548540510 548540743 7.110000e-101 377.0
19 TraesCS5A01G471200 chr7D 90.991 111 10 0 36 146 75346788 75346898 1.690000e-32 150.0
20 TraesCS5A01G471200 chr2D 95.339 236 8 3 2216 2450 448654244 448654477 3.310000e-99 372.0
21 TraesCS5A01G471200 chr2D 88.288 111 13 0 36 146 56804044 56804154 1.700000e-27 134.0
22 TraesCS5A01G471200 chr2B 94.068 236 12 2 2216 2450 448116053 448116287 9.260000e-95 357.0
23 TraesCS5A01G471200 chr6B 92.562 242 17 1 2216 2456 311649592 311649351 2.000000e-91 346.0
24 TraesCS5A01G471200 chr3B 77.734 256 44 10 193 437 707043478 707043731 7.850000e-31 145.0
25 TraesCS5A01G471200 chr3D 90.090 111 10 1 37 146 577649412 577649522 2.820000e-30 143.0
26 TraesCS5A01G471200 chr3D 78.173 197 32 8 192 377 544278599 544278403 6.150000e-22 115.0
27 TraesCS5A01G471200 chr2A 78.733 221 40 7 185 399 15457778 15457997 1.020000e-29 141.0
28 TraesCS5A01G471200 chr2A 88.288 111 13 0 37 147 381415078 381414968 1.700000e-27 134.0
29 TraesCS5A01G471200 chr1B 89.286 112 11 1 36 146 10761225 10761114 3.650000e-29 139.0
30 TraesCS5A01G471200 chr7A 88.496 113 11 2 36 146 578974903 578974791 4.720000e-28 135.0
31 TraesCS5A01G471200 chr7A 85.714 70 10 0 2553 2622 32830590 32830521 1.040000e-09 75.0
32 TraesCS5A01G471200 chr3A 88.496 113 11 1 36 148 613215741 613215631 4.720000e-28 135.0
33 TraesCS5A01G471200 chr3A 94.737 38 1 1 2593 2629 611700491 611700528 1.050000e-04 58.4
34 TraesCS5A01G471200 chr3A 92.308 39 3 0 2582 2620 589827859 589827821 3.780000e-04 56.5
35 TraesCS5A01G471200 chr1A 87.500 112 14 0 36 147 37613580 37613691 2.200000e-26 130.0
36 TraesCS5A01G471200 chr5B 81.818 165 12 10 1311 1472 655288593 655288742 3.680000e-24 122.0
37 TraesCS5A01G471200 chr5B 82.609 115 10 7 191 295 273880635 273880521 2.880000e-15 93.5
38 TraesCS5A01G471200 chr5B 87.719 57 5 2 2573 2628 683508193 683508248 6.290000e-07 65.8
39 TraesCS5A01G471200 chr4B 75.986 279 44 11 191 457 37342552 37342285 3.680000e-24 122.0
40 TraesCS5A01G471200 chr4B 79.000 200 24 15 192 378 515064260 515064066 1.320000e-23 121.0
41 TraesCS5A01G471200 chr4A 80.667 150 26 3 239 385 141106410 141106559 2.210000e-21 113.0
42 TraesCS5A01G471200 chr6D 88.235 68 8 0 2553 2620 436420288 436420221 6.240000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G471200 chr5A 647806950 647809669 2719 True 5024.0 5024 100.0000 1 2720 1 chr5A.!!$R3 2719
1 TraesCS5A01G471200 chr5A 647606522 647610229 3707 True 340.4 623 88.2838 1 1638 5 chr5A.!!$R4 1637
2 TraesCS5A01G471200 chr5D 520282169 520284064 1895 True 1060.0 1953 91.6550 769 2655 2 chr5D.!!$R3 1886
3 TraesCS5A01G471200 chrUn 311502969 311504828 1859 False 1041.0 1941 89.8725 756 2655 2 chrUn.!!$F1 1899

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
897 2922 0.038526 CTCGAACAACCTACGGCAGT 60.039 55.0 0.0 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2321 4679 0.032615 ACCAACCAAAACCTGAGCCA 60.033 50.0 0.0 0.0 0.0 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.793592 GCCATATAGGGACCTAAATTTTAAGTG 58.206 37.037 7.83 0.00 38.09 3.16
78 79 3.547413 GCAGACGCTCATACATACGTGTA 60.547 47.826 0.00 0.00 39.16 2.90
98 99 6.624204 CGTGTATACACTCACACCTATGAACA 60.624 42.308 28.53 0.00 44.34 3.18
103 104 5.479306 ACACTCACACCTATGAACATACAC 58.521 41.667 0.00 0.00 0.00 2.90
117 118 0.248289 ATACACACGCACACCCTACC 59.752 55.000 0.00 0.00 0.00 3.18
118 119 0.828762 TACACACGCACACCCTACCT 60.829 55.000 0.00 0.00 0.00 3.08
123 124 1.112113 ACGCACACCCTACCTCTATG 58.888 55.000 0.00 0.00 0.00 2.23
154 155 1.961394 AGAGACTGAGCCAAACGTACA 59.039 47.619 0.00 0.00 0.00 2.90
156 157 3.006967 AGAGACTGAGCCAAACGTACATT 59.993 43.478 0.00 0.00 0.00 2.71
212 213 3.739494 CGCTCATATATACACGCGTACA 58.261 45.455 13.44 2.09 36.28 2.90
214 215 4.668431 CGCTCATATATACACGCGTACACT 60.668 45.833 13.44 0.00 36.28 3.55
216 217 5.616204 GCTCATATATACACGCGTACACTCA 60.616 44.000 13.44 0.00 0.00 3.41
219 220 0.171903 ATACACGCGTACACTCACCC 59.828 55.000 13.44 0.00 0.00 4.61
220 221 0.890542 TACACGCGTACACTCACCCT 60.891 55.000 13.44 0.00 0.00 4.34
221 222 0.890542 ACACGCGTACACTCACCCTA 60.891 55.000 13.44 0.00 0.00 3.53
234 235 3.055094 ACTCACCCTATGAACACACATCC 60.055 47.826 0.00 0.00 36.69 3.51
235 236 2.238646 TCACCCTATGAACACACATCCC 59.761 50.000 0.00 0.00 33.02 3.85
239 240 3.480470 CCTATGAACACACATCCCATCC 58.520 50.000 0.00 0.00 0.00 3.51
240 241 3.117926 CCTATGAACACACATCCCATCCA 60.118 47.826 0.00 0.00 0.00 3.41
244 245 5.903198 TGAACACACATCCCATCCATATA 57.097 39.130 0.00 0.00 0.00 0.86
262 263 5.010719 CCATATAAGCACCTCCGAGAAACTA 59.989 44.000 0.00 0.00 0.00 2.24
264 265 2.745515 AGCACCTCCGAGAAACTAAC 57.254 50.000 0.00 0.00 0.00 2.34
265 266 2.249139 AGCACCTCCGAGAAACTAACT 58.751 47.619 0.00 0.00 0.00 2.24
266 267 2.028930 AGCACCTCCGAGAAACTAACTG 60.029 50.000 0.00 0.00 0.00 3.16
268 269 1.275573 ACCTCCGAGAAACTAACTGGC 59.724 52.381 0.00 0.00 0.00 4.85
269 270 1.275291 CCTCCGAGAAACTAACTGGCA 59.725 52.381 0.00 0.00 0.00 4.92
271 272 3.132289 CCTCCGAGAAACTAACTGGCATA 59.868 47.826 0.00 0.00 0.00 3.14
272 273 4.202264 CCTCCGAGAAACTAACTGGCATAT 60.202 45.833 0.00 0.00 0.00 1.78
282 284 9.331282 GAAACTAACTGGCATATTATCTTGAGT 57.669 33.333 0.00 0.00 0.00 3.41
283 285 9.686683 AAACTAACTGGCATATTATCTTGAGTT 57.313 29.630 0.00 0.00 0.00 3.01
285 287 9.113838 ACTAACTGGCATATTATCTTGAGTTTG 57.886 33.333 0.00 0.00 0.00 2.93
314 316 0.311165 CCATAGGTGCCTCGTAGTCG 59.689 60.000 0.00 0.00 38.55 4.18
316 318 1.453762 ATAGGTGCCTCGTAGTCGGC 61.454 60.000 0.00 0.00 43.23 5.54
331 333 2.124278 GGCGGAAATGTCTCCCCC 60.124 66.667 0.00 0.00 31.03 5.40
389 391 0.532862 AGAATAATGCGAGCACCGGG 60.533 55.000 6.32 0.00 39.04 5.73
394 396 1.895020 AATGCGAGCACCGGGACTTA 61.895 55.000 6.32 0.00 39.04 2.24
396 398 1.153429 GCGAGCACCGGGACTTAAT 60.153 57.895 6.32 0.00 39.04 1.40
417 419 1.143183 CTCGTGGGTTGGGGATACG 59.857 63.158 0.00 0.00 36.20 3.06
418 420 2.188469 CGTGGGTTGGGGATACGG 59.812 66.667 0.00 0.00 37.60 4.02
437 439 2.159226 CGGCCGTCCTCTATAATCATCC 60.159 54.545 19.50 0.00 0.00 3.51
445 447 6.587990 CGTCCTCTATAATCATCCAATCACAC 59.412 42.308 0.00 0.00 0.00 3.82
446 448 7.445121 GTCCTCTATAATCATCCAATCACACA 58.555 38.462 0.00 0.00 0.00 3.72
454 456 4.441792 TCATCCAATCACACATAGGTTCG 58.558 43.478 0.00 0.00 0.00 3.95
462 464 5.523438 TCACACATAGGTTCGCATATACA 57.477 39.130 0.00 0.00 0.00 2.29
467 469 8.128582 CACACATAGGTTCGCATATACATTTTT 58.871 33.333 0.00 0.00 0.00 1.94
558 2339 3.138283 AGGACCAAACACCTCAATTCTGA 59.862 43.478 0.00 0.00 0.00 3.27
607 2388 7.907214 GACCTAATGTCTTGTACAACAATCT 57.093 36.000 3.59 0.00 42.70 2.40
608 2389 7.907214 ACCTAATGTCTTGTACAACAATCTC 57.093 36.000 3.59 0.00 42.70 2.75
609 2390 6.879458 ACCTAATGTCTTGTACAACAATCTCC 59.121 38.462 3.59 0.00 42.70 3.71
610 2391 6.316390 CCTAATGTCTTGTACAACAATCTCCC 59.684 42.308 3.59 0.00 42.70 4.30
611 2392 4.698201 TGTCTTGTACAACAATCTCCCA 57.302 40.909 3.59 0.00 37.48 4.37
612 2393 5.042463 TGTCTTGTACAACAATCTCCCAA 57.958 39.130 3.59 0.00 37.48 4.12
613 2394 5.063204 TGTCTTGTACAACAATCTCCCAAG 58.937 41.667 3.59 0.00 37.48 3.61
614 2395 5.163248 TGTCTTGTACAACAATCTCCCAAGA 60.163 40.000 3.59 0.00 37.48 3.02
615 2396 5.763204 GTCTTGTACAACAATCTCCCAAGAA 59.237 40.000 3.59 0.00 38.68 2.52
616 2397 6.262273 GTCTTGTACAACAATCTCCCAAGAAA 59.738 38.462 3.59 0.00 38.68 2.52
617 2398 6.831353 TCTTGTACAACAATCTCCCAAGAAAA 59.169 34.615 3.59 0.00 37.48 2.29
618 2399 6.385649 TGTACAACAATCTCCCAAGAAAAC 57.614 37.500 0.00 0.00 34.49 2.43
619 2400 4.568152 ACAACAATCTCCCAAGAAAACG 57.432 40.909 0.00 0.00 34.49 3.60
620 2401 3.951680 ACAACAATCTCCCAAGAAAACGT 59.048 39.130 0.00 0.00 34.49 3.99
621 2402 4.036380 ACAACAATCTCCCAAGAAAACGTC 59.964 41.667 0.00 0.00 34.49 4.34
622 2403 4.086706 ACAATCTCCCAAGAAAACGTCT 57.913 40.909 0.00 0.00 38.69 4.18
726 2713 8.863872 AGCAATTACTCTGTTTTACATAGGTT 57.136 30.769 0.00 0.00 0.00 3.50
736 2723 2.526304 TACATAGGTTCGCCAGCATC 57.474 50.000 0.00 0.00 40.60 3.91
738 2725 0.886490 CATAGGTTCGCCAGCATCCC 60.886 60.000 0.00 0.00 40.60 3.85
741 2737 1.148273 GGTTCGCCAGCATCCCATA 59.852 57.895 0.00 0.00 37.19 2.74
791 2814 1.048601 AACCAGACCAAAGCTCTCGA 58.951 50.000 0.00 0.00 0.00 4.04
792 2815 0.605589 ACCAGACCAAAGCTCTCGAG 59.394 55.000 5.93 5.93 0.00 4.04
833 2858 2.611751 ACAAGGAAACAATTTTTGGCGC 59.388 40.909 0.00 0.00 34.12 6.53
836 2861 2.158971 AGGAAACAATTTTTGGCGCTGT 60.159 40.909 7.64 0.00 34.12 4.40
841 2866 0.104671 AATTTTTGGCGCTGTGTGCT 59.895 45.000 7.64 0.00 39.23 4.40
896 2921 1.352156 GCTCGAACAACCTACGGCAG 61.352 60.000 0.00 0.00 0.00 4.85
897 2922 0.038526 CTCGAACAACCTACGGCAGT 60.039 55.000 0.00 0.00 0.00 4.40
898 2923 0.038892 TCGAACAACCTACGGCAGTC 60.039 55.000 0.00 0.00 0.00 3.51
899 2924 1.342082 CGAACAACCTACGGCAGTCG 61.342 60.000 0.00 0.00 45.88 4.18
900 2925 1.005394 AACAACCTACGGCAGTCGG 60.005 57.895 6.00 6.00 44.45 4.79
901 2926 2.125673 CAACCTACGGCAGTCGGG 60.126 66.667 12.06 9.47 44.45 5.14
902 2927 4.078516 AACCTACGGCAGTCGGGC 62.079 66.667 12.06 0.00 44.45 6.13
919 2944 5.048224 AGTCGGGCATATATATACATACCGC 60.048 44.000 16.24 12.93 38.72 5.68
951 2976 6.451064 AATCCGTTCTCAACCCAATTAATC 57.549 37.500 0.00 0.00 0.00 1.75
952 2977 4.266714 TCCGTTCTCAACCCAATTAATCC 58.733 43.478 0.00 0.00 0.00 3.01
954 2979 3.687698 CGTTCTCAACCCAATTAATCCGT 59.312 43.478 0.00 0.00 0.00 4.69
959 3001 4.912586 TCAACCCAATTAATCCGTTCTCA 58.087 39.130 0.00 0.00 0.00 3.27
1009 3060 1.095807 ATCAGCCGAGATGTCGTCGA 61.096 55.000 11.66 4.88 45.30 4.20
1028 3079 2.669240 GTCCGGGAAGGTGAAGGG 59.331 66.667 0.00 0.00 41.99 3.95
1032 3083 2.592993 CGGGAAGGTGAAGGGAGCA 61.593 63.158 0.00 0.00 0.00 4.26
1061 3112 1.618640 GAGCAGTTCTTGGCGACGTC 61.619 60.000 5.18 5.18 34.54 4.34
1064 3115 3.110178 GTTCTTGGCGACGTCGGG 61.110 66.667 36.13 13.02 40.23 5.14
1085 3136 2.029964 GCACCCGACGGAGTTGAA 59.970 61.111 17.49 0.00 47.00 2.69
1110 3161 3.055675 TGACCAAGTTATACACCCCGAAG 60.056 47.826 0.00 0.00 0.00 3.79
1223 3301 4.803426 CCTCGACGCCACCTCAGC 62.803 72.222 0.00 0.00 0.00 4.26
1224 3302 4.803426 CTCGACGCCACCTCAGCC 62.803 72.222 0.00 0.00 0.00 4.85
1226 3304 4.803426 CGACGCCACCTCAGCCTC 62.803 72.222 0.00 0.00 0.00 4.70
1227 3305 3.695606 GACGCCACCTCAGCCTCA 61.696 66.667 0.00 0.00 0.00 3.86
1228 3306 3.655810 GACGCCACCTCAGCCTCAG 62.656 68.421 0.00 0.00 0.00 3.35
1261 3339 4.804420 ATCTCCAGGAGGCCGGCA 62.804 66.667 30.85 3.80 33.74 5.69
1355 3433 5.710099 TGAACAAGTCATGGTATTTCTTCCC 59.290 40.000 0.00 0.00 0.00 3.97
1419 3542 2.348998 CCGAAACCAGCAGGCTCT 59.651 61.111 0.00 0.00 39.06 4.09
1468 3618 1.134128 TGCAGAAACCAGCAGACTTCA 60.134 47.619 0.00 0.00 35.51 3.02
1720 3870 3.181483 ACGTTATTCTACCCAGCGTTAGG 60.181 47.826 0.00 0.00 0.00 2.69
1809 3961 4.708421 AGGTTAGCTATGTTACACTCGGAA 59.292 41.667 0.00 0.00 0.00 4.30
1814 3966 5.169295 AGCTATGTTACACTCGGAAGTTTC 58.831 41.667 0.00 0.00 31.71 2.78
1825 3977 0.449388 GGAAGTTTCTGAGCATGCGG 59.551 55.000 13.01 7.03 0.00 5.69
1836 3988 3.802866 TGAGCATGCGGTTATGTAATCA 58.197 40.909 13.01 3.32 0.00 2.57
1916 4068 4.870426 CGTGTCAGGCATGTATCTTTTACT 59.130 41.667 0.00 0.00 0.00 2.24
2005 4157 2.151360 CGCGCTCGTATTCAATGTCTAC 59.849 50.000 5.56 0.00 0.00 2.59
2058 4210 8.687824 ATGATTAAAAGCTCGTAAATGTTTGG 57.312 30.769 0.00 0.00 0.00 3.28
2063 4215 2.292292 AGCTCGTAAATGTTTGGCGTTT 59.708 40.909 0.00 0.00 39.43 3.60
2065 4217 3.623863 CTCGTAAATGTTTGGCGTTTGT 58.376 40.909 0.00 0.00 36.97 2.83
2073 4225 1.778591 GTTTGGCGTTTGTTGACATCG 59.221 47.619 5.36 5.36 0.00 3.84
2076 4228 1.574428 GCGTTTGTTGACATCGCCT 59.426 52.632 17.13 0.00 40.68 5.52
2088 4240 1.812571 ACATCGCCTTGCTTCGAAAAT 59.187 42.857 0.00 0.00 38.28 1.82
2089 4241 3.006940 ACATCGCCTTGCTTCGAAAATA 58.993 40.909 0.00 0.00 38.28 1.40
2091 4243 4.814234 ACATCGCCTTGCTTCGAAAATATA 59.186 37.500 0.00 0.00 38.28 0.86
2092 4244 5.470098 ACATCGCCTTGCTTCGAAAATATAT 59.530 36.000 0.00 0.00 38.28 0.86
2093 4245 6.017109 ACATCGCCTTGCTTCGAAAATATATT 60.017 34.615 0.00 0.00 38.28 1.28
2094 4246 7.172532 ACATCGCCTTGCTTCGAAAATATATTA 59.827 33.333 0.00 0.00 38.28 0.98
2095 4247 7.117241 TCGCCTTGCTTCGAAAATATATTAG 57.883 36.000 0.00 0.00 0.00 1.73
2096 4248 5.790495 CGCCTTGCTTCGAAAATATATTAGC 59.210 40.000 9.35 9.35 0.00 3.09
2098 4250 7.363431 GCCTTGCTTCGAAAATATATTAGCTT 58.637 34.615 15.00 0.79 0.00 3.74
2099 4251 7.324616 GCCTTGCTTCGAAAATATATTAGCTTG 59.675 37.037 15.00 9.32 0.00 4.01
2101 4253 9.162793 CTTGCTTCGAAAATATATTAGCTTGTG 57.837 33.333 15.00 3.48 0.00 3.33
2102 4254 8.432110 TGCTTCGAAAATATATTAGCTTGTGA 57.568 30.769 15.00 0.00 0.00 3.58
2104 4256 9.322776 GCTTCGAAAATATATTAGCTTGTGATG 57.677 33.333 0.00 1.85 0.00 3.07
2179 4537 9.741647 ACAGAGATTCAAACTTTCAGAAAAATC 57.258 29.630 8.38 8.38 0.00 2.17
2183 4541 9.317936 AGATTCAAACTTTCAGAAAAATCAACC 57.682 29.630 15.17 0.00 0.00 3.77
2184 4542 9.317936 GATTCAAACTTTCAGAAAAATCAACCT 57.682 29.630 10.50 0.00 0.00 3.50
2185 4543 9.671279 ATTCAAACTTTCAGAAAAATCAACCTT 57.329 25.926 0.00 0.00 0.00 3.50
2186 4544 9.500785 TTCAAACTTTCAGAAAAATCAACCTTT 57.499 25.926 0.00 0.00 0.00 3.11
2236 4594 2.452600 TTTTTGAGGAACTGGCAGGT 57.547 45.000 20.34 13.55 41.55 4.00
2238 4596 0.843309 TTTGAGGAACTGGCAGGTCA 59.157 50.000 31.86 18.55 41.55 4.02
2239 4597 0.108585 TTGAGGAACTGGCAGGTCAC 59.891 55.000 31.86 24.11 41.55 3.67
2240 4598 0.764369 TGAGGAACTGGCAGGTCACT 60.764 55.000 31.86 25.10 41.55 3.41
2241 4599 0.321122 GAGGAACTGGCAGGTCACTG 60.321 60.000 31.86 0.00 44.16 3.66
2265 4623 9.160496 CTGCCTATATATTAAGCAGGAGAAAAG 57.840 37.037 17.32 0.00 45.60 2.27
2278 4636 8.465273 AGCAGGAGAAAAGTAAAACAAATAGT 57.535 30.769 0.00 0.00 0.00 2.12
2280 4638 9.181805 GCAGGAGAAAAGTAAAACAAATAGTTC 57.818 33.333 0.00 0.00 40.26 3.01
2294 4652 5.526111 ACAAATAGTTCTTACAACACAGCGT 59.474 36.000 0.00 0.00 0.00 5.07
2295 4653 6.037830 ACAAATAGTTCTTACAACACAGCGTT 59.962 34.615 0.00 0.00 38.83 4.84
2298 4656 4.435425 AGTTCTTACAACACAGCGTTACA 58.565 39.130 0.00 0.00 35.52 2.41
2299 4657 4.871557 AGTTCTTACAACACAGCGTTACAA 59.128 37.500 0.00 0.00 35.52 2.41
2300 4658 5.526111 AGTTCTTACAACACAGCGTTACAAT 59.474 36.000 0.00 0.00 35.52 2.71
2302 4660 7.225145 AGTTCTTACAACACAGCGTTACAATTA 59.775 33.333 0.00 0.00 35.52 1.40
2303 4661 7.479897 TCTTACAACACAGCGTTACAATTAA 57.520 32.000 0.00 0.00 35.52 1.40
2304 4662 7.569297 TCTTACAACACAGCGTTACAATTAAG 58.431 34.615 0.00 0.00 35.52 1.85
2305 4663 5.994887 ACAACACAGCGTTACAATTAAGA 57.005 34.783 0.00 0.00 35.52 2.10
2308 4666 6.702723 ACAACACAGCGTTACAATTAAGAGTA 59.297 34.615 0.00 0.00 35.52 2.59
2309 4667 6.946229 ACACAGCGTTACAATTAAGAGTAG 57.054 37.500 0.00 0.00 0.00 2.57
2310 4668 6.684686 ACACAGCGTTACAATTAAGAGTAGA 58.315 36.000 0.00 0.00 0.00 2.59
2311 4669 7.149973 ACACAGCGTTACAATTAAGAGTAGAA 58.850 34.615 0.00 0.00 0.00 2.10
2312 4670 7.654520 ACACAGCGTTACAATTAAGAGTAGAAA 59.345 33.333 0.00 0.00 0.00 2.52
2313 4671 8.162880 CACAGCGTTACAATTAAGAGTAGAAAG 58.837 37.037 0.00 0.00 0.00 2.62
2315 4673 8.373992 CAGCGTTACAATTAAGAGTAGAAAGTC 58.626 37.037 0.00 0.00 0.00 3.01
2316 4674 8.305317 AGCGTTACAATTAAGAGTAGAAAGTCT 58.695 33.333 0.00 0.00 36.95 3.24
2326 4684 5.494632 GAGTAGAAAGTCTAGTCTGGCTC 57.505 47.826 11.32 0.00 43.03 4.70
2328 4686 4.947388 AGTAGAAAGTCTAGTCTGGCTCAG 59.053 45.833 0.00 0.00 26.52 3.35
2329 4687 3.096092 AGAAAGTCTAGTCTGGCTCAGG 58.904 50.000 0.00 0.00 31.51 3.86
2331 4689 2.614134 AGTCTAGTCTGGCTCAGGTT 57.386 50.000 0.00 0.00 31.51 3.50
2335 4693 2.303022 TCTAGTCTGGCTCAGGTTTTGG 59.697 50.000 0.00 0.00 31.51 3.28
2336 4694 0.846693 AGTCTGGCTCAGGTTTTGGT 59.153 50.000 2.86 0.00 31.51 3.67
2337 4695 1.215423 AGTCTGGCTCAGGTTTTGGTT 59.785 47.619 2.86 0.00 31.51 3.67
2338 4696 1.338020 GTCTGGCTCAGGTTTTGGTTG 59.662 52.381 2.86 0.00 31.51 3.77
2339 4697 0.675633 CTGGCTCAGGTTTTGGTTGG 59.324 55.000 0.00 0.00 0.00 3.77
2340 4698 0.032615 TGGCTCAGGTTTTGGTTGGT 60.033 50.000 0.00 0.00 0.00 3.67
2341 4699 1.119684 GGCTCAGGTTTTGGTTGGTT 58.880 50.000 0.00 0.00 0.00 3.67
2342 4700 1.068588 GGCTCAGGTTTTGGTTGGTTC 59.931 52.381 0.00 0.00 0.00 3.62
2343 4701 2.031870 GCTCAGGTTTTGGTTGGTTCT 58.968 47.619 0.00 0.00 0.00 3.01
2344 4702 2.034685 GCTCAGGTTTTGGTTGGTTCTC 59.965 50.000 0.00 0.00 0.00 2.87
2345 4703 3.287222 CTCAGGTTTTGGTTGGTTCTCA 58.713 45.455 0.00 0.00 0.00 3.27
2346 4704 3.699038 CTCAGGTTTTGGTTGGTTCTCAA 59.301 43.478 0.00 0.00 0.00 3.02
2360 4718 6.852420 TGGTTCTCAACATACTAAGCTAGT 57.148 37.500 0.00 0.00 42.68 2.57
2361 4719 6.631016 TGGTTCTCAACATACTAAGCTAGTG 58.369 40.000 0.00 0.00 39.81 2.74
2362 4720 6.436218 TGGTTCTCAACATACTAAGCTAGTGA 59.564 38.462 0.00 0.00 39.81 3.41
2363 4721 6.975772 GGTTCTCAACATACTAAGCTAGTGAG 59.024 42.308 0.00 0.00 39.81 3.51
2364 4722 7.148052 GGTTCTCAACATACTAAGCTAGTGAGA 60.148 40.741 0.00 0.00 39.81 3.27
2365 4723 8.410141 GTTCTCAACATACTAAGCTAGTGAGAT 58.590 37.037 0.00 0.00 39.81 2.75
2366 4724 7.935520 TCTCAACATACTAAGCTAGTGAGATG 58.064 38.462 0.00 0.00 39.81 2.90
2367 4725 7.775561 TCTCAACATACTAAGCTAGTGAGATGA 59.224 37.037 0.00 0.00 39.81 2.92
2368 4726 8.293699 TCAACATACTAAGCTAGTGAGATGAA 57.706 34.615 0.00 0.00 39.81 2.57
2369 4727 8.749354 TCAACATACTAAGCTAGTGAGATGAAA 58.251 33.333 0.00 0.00 39.81 2.69
2370 4728 9.029243 CAACATACTAAGCTAGTGAGATGAAAG 57.971 37.037 0.00 0.00 39.81 2.62
2371 4729 7.206687 ACATACTAAGCTAGTGAGATGAAAGC 58.793 38.462 0.00 0.00 39.81 3.51
2372 4730 5.667539 ACTAAGCTAGTGAGATGAAAGCA 57.332 39.130 0.00 0.00 37.69 3.91
2373 4731 6.232581 ACTAAGCTAGTGAGATGAAAGCAT 57.767 37.500 0.00 0.00 37.69 3.79
2374 4732 7.353414 ACTAAGCTAGTGAGATGAAAGCATA 57.647 36.000 0.00 0.00 37.69 3.14
2375 4733 7.432869 ACTAAGCTAGTGAGATGAAAGCATAG 58.567 38.462 0.00 0.00 39.27 2.23
2376 4734 5.212532 AGCTAGTGAGATGAAAGCATAGG 57.787 43.478 0.00 0.00 35.63 2.57
2377 4735 4.653341 AGCTAGTGAGATGAAAGCATAGGT 59.347 41.667 0.00 0.00 35.63 3.08
2378 4736 5.130145 AGCTAGTGAGATGAAAGCATAGGTT 59.870 40.000 0.00 0.00 35.63 3.50
2379 4737 5.236047 GCTAGTGAGATGAAAGCATAGGTTG 59.764 44.000 0.00 0.00 34.11 3.77
2380 4738 5.426689 AGTGAGATGAAAGCATAGGTTGA 57.573 39.130 0.00 0.00 34.11 3.18
2381 4739 5.809001 AGTGAGATGAAAGCATAGGTTGAA 58.191 37.500 0.00 0.00 34.11 2.69
2382 4740 5.879223 AGTGAGATGAAAGCATAGGTTGAAG 59.121 40.000 0.00 0.00 34.11 3.02
2383 4741 5.877012 GTGAGATGAAAGCATAGGTTGAAGA 59.123 40.000 0.00 0.00 34.11 2.87
2384 4742 6.372659 GTGAGATGAAAGCATAGGTTGAAGAA 59.627 38.462 0.00 0.00 34.11 2.52
2385 4743 7.066766 GTGAGATGAAAGCATAGGTTGAAGAAT 59.933 37.037 0.00 0.00 34.11 2.40
2386 4744 7.613022 TGAGATGAAAGCATAGGTTGAAGAATT 59.387 33.333 0.00 0.00 34.11 2.17
2387 4745 8.358582 AGATGAAAGCATAGGTTGAAGAATTT 57.641 30.769 0.00 0.00 34.11 1.82
2388 4746 8.465201 AGATGAAAGCATAGGTTGAAGAATTTC 58.535 33.333 0.00 0.00 34.11 2.17
2389 4747 6.924111 TGAAAGCATAGGTTGAAGAATTTCC 58.076 36.000 0.00 0.00 32.09 3.13
2390 4748 6.721208 TGAAAGCATAGGTTGAAGAATTTCCT 59.279 34.615 0.00 0.00 32.09 3.36
2391 4749 6.521151 AAGCATAGGTTGAAGAATTTCCTG 57.479 37.500 0.00 0.00 32.09 3.86
2392 4750 4.952335 AGCATAGGTTGAAGAATTTCCTGG 59.048 41.667 0.00 0.00 32.09 4.45
2393 4751 4.706962 GCATAGGTTGAAGAATTTCCTGGT 59.293 41.667 0.00 0.00 32.09 4.00
2394 4752 5.185828 GCATAGGTTGAAGAATTTCCTGGTT 59.814 40.000 0.00 0.00 32.09 3.67
2395 4753 6.624423 CATAGGTTGAAGAATTTCCTGGTTG 58.376 40.000 0.00 0.00 32.09 3.77
2396 4754 4.803452 AGGTTGAAGAATTTCCTGGTTGA 58.197 39.130 0.00 0.00 32.09 3.18
2397 4755 5.397360 AGGTTGAAGAATTTCCTGGTTGAT 58.603 37.500 0.00 0.00 32.09 2.57
2398 4756 5.244626 AGGTTGAAGAATTTCCTGGTTGATG 59.755 40.000 0.00 0.00 32.09 3.07
2399 4757 5.243730 GGTTGAAGAATTTCCTGGTTGATGA 59.756 40.000 0.00 0.00 32.09 2.92
2400 4758 6.385033 GTTGAAGAATTTCCTGGTTGATGAG 58.615 40.000 0.00 0.00 32.09 2.90
2401 4759 5.012239 TGAAGAATTTCCTGGTTGATGAGG 58.988 41.667 0.00 0.00 32.09 3.86
2402 4760 4.934797 AGAATTTCCTGGTTGATGAGGA 57.065 40.909 0.00 0.00 36.54 3.71
2403 4761 4.853007 AGAATTTCCTGGTTGATGAGGAG 58.147 43.478 0.00 0.00 39.59 3.69
2404 4762 4.537688 AGAATTTCCTGGTTGATGAGGAGA 59.462 41.667 0.00 0.00 39.59 3.71
2405 4763 4.934797 ATTTCCTGGTTGATGAGGAGAA 57.065 40.909 0.00 0.00 39.59 2.87
2406 4764 3.988976 TTCCTGGTTGATGAGGAGAAG 57.011 47.619 0.00 0.00 39.59 2.85
2407 4765 1.556911 TCCTGGTTGATGAGGAGAAGC 59.443 52.381 0.00 0.00 33.18 3.86
2408 4766 1.280133 CCTGGTTGATGAGGAGAAGCA 59.720 52.381 0.00 0.00 0.00 3.91
2409 4767 2.354259 CTGGTTGATGAGGAGAAGCAC 58.646 52.381 0.00 0.00 0.00 4.40
2410 4768 1.699083 TGGTTGATGAGGAGAAGCACA 59.301 47.619 0.00 0.00 0.00 4.57
2411 4769 2.079925 GGTTGATGAGGAGAAGCACAC 58.920 52.381 0.00 0.00 0.00 3.82
2412 4770 2.079925 GTTGATGAGGAGAAGCACACC 58.920 52.381 0.00 0.00 0.00 4.16
2413 4771 0.615331 TGATGAGGAGAAGCACACCC 59.385 55.000 0.00 0.00 0.00 4.61
2414 4772 0.908198 GATGAGGAGAAGCACACCCT 59.092 55.000 0.00 0.00 0.00 4.34
2415 4773 0.617413 ATGAGGAGAAGCACACCCTG 59.383 55.000 0.00 0.00 0.00 4.45
2423 4781 2.595463 GCACACCCTGCTCAGCAA 60.595 61.111 0.00 0.00 43.33 3.91
2424 4782 2.623915 GCACACCCTGCTCAGCAAG 61.624 63.158 0.00 0.00 43.33 4.01
2425 4783 1.071987 CACACCCTGCTCAGCAAGA 59.928 57.895 0.00 0.00 38.41 3.02
2427 4785 1.374190 CACCCTGCTCAGCAAGAGT 59.626 57.895 0.00 0.00 46.47 3.24
2428 4786 0.673022 CACCCTGCTCAGCAAGAGTC 60.673 60.000 0.00 2.11 46.47 3.36
2429 4787 0.835543 ACCCTGCTCAGCAAGAGTCT 60.836 55.000 0.00 0.00 46.47 3.24
2430 4788 0.324285 CCCTGCTCAGCAAGAGTCTT 59.676 55.000 0.00 0.00 46.47 3.01
2431 4789 1.552337 CCCTGCTCAGCAAGAGTCTTA 59.448 52.381 4.74 0.00 46.47 2.10
2432 4790 2.170187 CCCTGCTCAGCAAGAGTCTTAT 59.830 50.000 4.74 0.00 46.47 1.73
2433 4791 3.196463 CCTGCTCAGCAAGAGTCTTATG 58.804 50.000 4.74 7.91 46.47 1.90
2434 4792 2.608546 CTGCTCAGCAAGAGTCTTATGC 59.391 50.000 4.74 6.90 46.47 3.14
2436 4794 2.865551 GCTCAGCAAGAGTCTTATGCTC 59.134 50.000 15.07 3.00 46.98 4.26
2437 4795 3.114809 CTCAGCAAGAGTCTTATGCTCG 58.885 50.000 15.07 11.36 46.98 5.03
2438 4796 2.755103 TCAGCAAGAGTCTTATGCTCGA 59.245 45.455 15.07 13.05 46.98 4.04
2439 4797 3.193479 TCAGCAAGAGTCTTATGCTCGAA 59.807 43.478 15.07 3.44 46.98 3.71
2440 4798 4.118410 CAGCAAGAGTCTTATGCTCGAAT 58.882 43.478 15.07 0.00 46.98 3.34
2441 4799 5.067805 TCAGCAAGAGTCTTATGCTCGAATA 59.932 40.000 15.07 0.00 46.98 1.75
2442 4800 5.174761 CAGCAAGAGTCTTATGCTCGAATAC 59.825 44.000 15.07 0.00 46.98 1.89
2443 4801 4.147306 GCAAGAGTCTTATGCTCGAATACG 59.853 45.833 4.74 0.00 37.99 3.06
2444 4802 3.891324 AGAGTCTTATGCTCGAATACGC 58.109 45.455 0.00 0.00 37.99 4.42
2445 4803 2.651701 AGTCTTATGCTCGAATACGCG 58.348 47.619 3.53 3.53 39.58 6.01
2446 4804 2.033049 AGTCTTATGCTCGAATACGCGT 59.967 45.455 19.17 19.17 39.58 6.01
2447 4805 2.401063 GTCTTATGCTCGAATACGCGTC 59.599 50.000 18.63 0.00 39.58 5.19
2448 4806 2.289820 TCTTATGCTCGAATACGCGTCT 59.710 45.455 18.63 1.73 39.58 4.18
2449 4807 2.032414 TATGCTCGAATACGCGTCTG 57.968 50.000 18.63 4.03 39.58 3.51
2450 4808 0.595053 ATGCTCGAATACGCGTCTGG 60.595 55.000 18.63 5.91 39.58 3.86
2451 4809 1.226603 GCTCGAATACGCGTCTGGT 60.227 57.895 18.63 0.00 39.58 4.00
2452 4810 0.801067 GCTCGAATACGCGTCTGGTT 60.801 55.000 18.63 6.94 39.58 3.67
2453 4811 0.914551 CTCGAATACGCGTCTGGTTG 59.085 55.000 18.63 3.49 39.58 3.77
2454 4812 0.522626 TCGAATACGCGTCTGGTTGA 59.477 50.000 18.63 6.11 39.58 3.18
2455 4813 1.133598 TCGAATACGCGTCTGGTTGAT 59.866 47.619 18.63 0.00 39.58 2.57
2456 4814 1.255342 CGAATACGCGTCTGGTTGATG 59.745 52.381 18.63 0.00 34.89 3.07
2457 4815 2.536365 GAATACGCGTCTGGTTGATGA 58.464 47.619 18.63 0.00 33.63 2.92
2458 4816 2.209838 ATACGCGTCTGGTTGATGAG 57.790 50.000 18.63 0.00 37.48 2.90
2459 4817 0.172578 TACGCGTCTGGTTGATGAGG 59.827 55.000 18.63 0.00 36.09 3.86
2460 4818 1.215382 CGCGTCTGGTTGATGAGGA 59.785 57.895 0.00 0.00 33.63 3.71
2461 4819 0.803768 CGCGTCTGGTTGATGAGGAG 60.804 60.000 0.00 0.00 33.63 3.69
2462 4820 0.532573 GCGTCTGGTTGATGAGGAGA 59.467 55.000 0.00 0.00 33.63 3.71
2463 4821 1.066858 GCGTCTGGTTGATGAGGAGAA 60.067 52.381 0.00 0.00 33.63 2.87
2464 4822 2.612972 GCGTCTGGTTGATGAGGAGAAA 60.613 50.000 0.00 0.00 33.63 2.52
2465 4823 3.664107 CGTCTGGTTGATGAGGAGAAAA 58.336 45.455 0.00 0.00 33.63 2.29
2466 4824 3.433615 CGTCTGGTTGATGAGGAGAAAAC 59.566 47.826 0.00 0.00 33.63 2.43
2467 4825 3.753797 GTCTGGTTGATGAGGAGAAAACC 59.246 47.826 0.00 0.00 40.59 3.27
2468 4826 3.394274 TCTGGTTGATGAGGAGAAAACCA 59.606 43.478 5.53 5.53 46.04 3.67
2469 4827 4.177537 TGGTTGATGAGGAGAAAACCAA 57.822 40.909 3.19 0.00 45.43 3.67
2470 4828 4.541705 TGGTTGATGAGGAGAAAACCAAA 58.458 39.130 3.19 0.00 45.43 3.28
2471 4829 5.147032 TGGTTGATGAGGAGAAAACCAAAT 58.853 37.500 3.19 0.00 45.43 2.32
2472 4830 5.602145 TGGTTGATGAGGAGAAAACCAAATT 59.398 36.000 3.19 0.00 45.43 1.82
2473 4831 6.099557 TGGTTGATGAGGAGAAAACCAAATTT 59.900 34.615 3.19 0.00 45.43 1.82
2474 4832 6.992123 GGTTGATGAGGAGAAAACCAAATTTT 59.008 34.615 0.00 0.00 43.44 1.82
2526 4884 9.828691 TTATATTATGAACTCTCATCCCTCAGA 57.171 33.333 0.00 0.00 41.57 3.27
2527 4885 8.733092 ATATTATGAACTCTCATCCCTCAGAA 57.267 34.615 0.00 0.00 41.57 3.02
2528 4886 6.477053 TTATGAACTCTCATCCCTCAGAAG 57.523 41.667 0.00 0.00 41.57 2.85
2529 4887 4.053009 TGAACTCTCATCCCTCAGAAGA 57.947 45.455 0.00 0.00 0.00 2.87
2530 4888 4.618635 TGAACTCTCATCCCTCAGAAGAT 58.381 43.478 0.00 0.00 0.00 2.40
2531 4889 4.405036 TGAACTCTCATCCCTCAGAAGATG 59.595 45.833 4.35 4.35 41.05 2.90
2532 4890 4.262891 ACTCTCATCCCTCAGAAGATGA 57.737 45.455 10.87 10.87 45.03 2.92
2539 4897 2.432146 TCCCTCAGAAGATGATTGACGG 59.568 50.000 0.00 0.00 37.28 4.79
2591 4949 2.159170 CCTCTCCTCCGACTGAATGAAC 60.159 54.545 0.00 0.00 0.00 3.18
2596 4954 2.417379 CCTCCGACTGAATGAACATCGT 60.417 50.000 0.00 0.00 0.00 3.73
2599 4957 2.515912 CGACTGAATGAACATCGTCGA 58.484 47.619 19.24 0.00 41.62 4.20
2655 5013 6.777580 ACTCCAACACAAGAAATCTAACCATT 59.222 34.615 0.00 0.00 0.00 3.16
2656 5014 7.287696 ACTCCAACACAAGAAATCTAACCATTT 59.712 33.333 0.00 0.00 0.00 2.32
2657 5015 8.698973 TCCAACACAAGAAATCTAACCATTTA 57.301 30.769 0.00 0.00 0.00 1.40
2658 5016 9.137459 TCCAACACAAGAAATCTAACCATTTAA 57.863 29.630 0.00 0.00 0.00 1.52
2659 5017 9.410556 CCAACACAAGAAATCTAACCATTTAAG 57.589 33.333 0.00 0.00 0.00 1.85
2660 5018 8.915654 CAACACAAGAAATCTAACCATTTAAGC 58.084 33.333 0.00 0.00 0.00 3.09
2661 5019 8.409358 ACACAAGAAATCTAACCATTTAAGCT 57.591 30.769 0.00 0.00 0.00 3.74
2662 5020 9.515226 ACACAAGAAATCTAACCATTTAAGCTA 57.485 29.630 0.00 0.00 0.00 3.32
2665 5023 9.455847 CAAGAAATCTAACCATTTAAGCTATGC 57.544 33.333 0.00 0.00 0.00 3.14
2666 5024 8.986929 AGAAATCTAACCATTTAAGCTATGCT 57.013 30.769 0.00 0.00 42.56 3.79
2670 5028 9.799106 AATCTAACCATTTAAGCTATGCTATGT 57.201 29.630 0.00 0.00 38.25 2.29
2671 5029 8.833231 TCTAACCATTTAAGCTATGCTATGTC 57.167 34.615 0.00 0.00 38.25 3.06
2672 5030 8.428852 TCTAACCATTTAAGCTATGCTATGTCA 58.571 33.333 0.00 0.00 38.25 3.58
2673 5031 6.867662 ACCATTTAAGCTATGCTATGTCAC 57.132 37.500 0.00 0.00 38.25 3.67
2674 5032 6.595682 ACCATTTAAGCTATGCTATGTCACT 58.404 36.000 0.00 0.00 38.25 3.41
2675 5033 7.735917 ACCATTTAAGCTATGCTATGTCACTA 58.264 34.615 0.00 0.00 38.25 2.74
2676 5034 8.210946 ACCATTTAAGCTATGCTATGTCACTAA 58.789 33.333 0.00 0.00 38.25 2.24
2677 5035 8.499162 CCATTTAAGCTATGCTATGTCACTAAC 58.501 37.037 0.00 0.00 38.25 2.34
2678 5036 8.499162 CATTTAAGCTATGCTATGTCACTAACC 58.501 37.037 0.00 0.00 38.25 2.85
2679 5037 5.614324 AAGCTATGCTATGTCACTAACCA 57.386 39.130 0.00 0.00 38.25 3.67
2680 5038 5.207110 AGCTATGCTATGTCACTAACCAG 57.793 43.478 0.00 0.00 36.99 4.00
2681 5039 4.895889 AGCTATGCTATGTCACTAACCAGA 59.104 41.667 0.00 0.00 36.99 3.86
2682 5040 5.541868 AGCTATGCTATGTCACTAACCAGAT 59.458 40.000 0.00 0.00 36.99 2.90
2683 5041 6.042552 AGCTATGCTATGTCACTAACCAGATT 59.957 38.462 0.00 0.00 36.99 2.40
2684 5042 6.146837 GCTATGCTATGTCACTAACCAGATTG 59.853 42.308 0.00 0.00 0.00 2.67
2685 5043 5.675684 TGCTATGTCACTAACCAGATTGA 57.324 39.130 0.00 0.00 0.00 2.57
2686 5044 6.239217 TGCTATGTCACTAACCAGATTGAT 57.761 37.500 0.00 0.00 0.00 2.57
2687 5045 6.283694 TGCTATGTCACTAACCAGATTGATC 58.716 40.000 0.00 0.00 0.00 2.92
2688 5046 6.098838 TGCTATGTCACTAACCAGATTGATCT 59.901 38.462 0.00 0.00 37.72 2.75
2689 5047 6.644592 GCTATGTCACTAACCAGATTGATCTC 59.355 42.308 0.00 0.00 34.22 2.75
2690 5048 6.805016 ATGTCACTAACCAGATTGATCTCT 57.195 37.500 0.00 0.00 34.22 3.10
2691 5049 6.214191 TGTCACTAACCAGATTGATCTCTC 57.786 41.667 0.00 0.00 34.22 3.20
2692 5050 5.716703 TGTCACTAACCAGATTGATCTCTCA 59.283 40.000 0.00 0.00 34.22 3.27
2693 5051 6.211384 TGTCACTAACCAGATTGATCTCTCAA 59.789 38.462 0.00 0.00 45.15 3.02
2694 5052 6.533367 GTCACTAACCAGATTGATCTCTCAAC 59.467 42.308 0.00 0.00 43.92 3.18
2695 5053 6.438741 TCACTAACCAGATTGATCTCTCAACT 59.561 38.462 0.00 0.00 43.92 3.16
2696 5054 7.038729 TCACTAACCAGATTGATCTCTCAACTT 60.039 37.037 0.00 0.00 43.92 2.66
2697 5055 7.064371 CACTAACCAGATTGATCTCTCAACTTG 59.936 40.741 0.00 0.00 43.92 3.16
2698 5056 4.841422 ACCAGATTGATCTCTCAACTTGG 58.159 43.478 13.93 13.93 43.92 3.61
2699 5057 4.197750 CCAGATTGATCTCTCAACTTGGG 58.802 47.826 10.09 0.00 43.92 4.12
2700 5058 4.080695 CCAGATTGATCTCTCAACTTGGGA 60.081 45.833 10.09 0.00 43.92 4.37
2701 5059 5.117584 CAGATTGATCTCTCAACTTGGGAG 58.882 45.833 11.98 11.98 46.25 4.30
2702 5060 4.782156 AGATTGATCTCTCAACTTGGGAGT 59.218 41.667 16.77 6.11 45.13 3.85
2703 5061 4.982241 TTGATCTCTCAACTTGGGAGTT 57.018 40.909 16.77 9.81 45.13 3.01
2704 5062 6.441924 AGATTGATCTCTCAACTTGGGAGTTA 59.558 38.462 16.77 1.03 45.13 2.24
2705 5063 6.433847 TTGATCTCTCAACTTGGGAGTTAA 57.566 37.500 16.77 8.94 45.13 2.01
2706 5064 6.433847 TGATCTCTCAACTTGGGAGTTAAA 57.566 37.500 16.77 0.01 45.13 1.52
2707 5065 7.020827 TGATCTCTCAACTTGGGAGTTAAAT 57.979 36.000 16.77 4.72 45.13 1.40
2708 5066 7.461749 TGATCTCTCAACTTGGGAGTTAAATT 58.538 34.615 16.77 0.00 45.13 1.82
2709 5067 8.602424 TGATCTCTCAACTTGGGAGTTAAATTA 58.398 33.333 16.77 0.00 45.13 1.40
2710 5068 9.620259 GATCTCTCAACTTGGGAGTTAAATTAT 57.380 33.333 16.77 3.09 45.13 1.28
2712 5070 9.886132 TCTCTCAACTTGGGAGTTAAATTATAC 57.114 33.333 16.77 0.00 45.13 1.47
2713 5071 8.712285 TCTCAACTTGGGAGTTAAATTATACG 57.288 34.615 0.00 0.00 44.14 3.06
2714 5072 8.533657 TCTCAACTTGGGAGTTAAATTATACGA 58.466 33.333 0.00 0.00 44.14 3.43
2715 5073 9.158233 CTCAACTTGGGAGTTAAATTATACGAA 57.842 33.333 0.00 0.00 44.14 3.85
2716 5074 8.938906 TCAACTTGGGAGTTAAATTATACGAAC 58.061 33.333 0.00 0.00 44.14 3.95
2717 5075 8.943002 CAACTTGGGAGTTAAATTATACGAACT 58.057 33.333 0.00 0.00 44.14 3.01
2718 5076 8.488651 ACTTGGGAGTTAAATTATACGAACTG 57.511 34.615 0.00 0.00 32.37 3.16
2719 5077 8.098912 ACTTGGGAGTTAAATTATACGAACTGT 58.901 33.333 0.00 0.00 32.37 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.750512 CGTCTGCGTATGTACTGTGTTA 58.249 45.455 0.00 0.00 0.00 2.41
45 46 3.324170 GCGTCTGCGTATGTACTGT 57.676 52.632 0.00 0.00 40.81 3.55
78 79 7.093509 TGTGTATGTTCATAGGTGTGAGTGTAT 60.094 37.037 0.00 0.00 0.00 2.29
87 88 3.062099 GTGCGTGTGTATGTTCATAGGTG 59.938 47.826 0.00 0.00 0.00 4.00
88 89 3.259064 GTGCGTGTGTATGTTCATAGGT 58.741 45.455 0.00 0.00 0.00 3.08
98 99 0.248289 GGTAGGGTGTGCGTGTGTAT 59.752 55.000 0.00 0.00 0.00 2.29
103 104 1.112113 ATAGAGGTAGGGTGTGCGTG 58.888 55.000 0.00 0.00 0.00 5.34
117 118 4.402155 AGTCTCTTGAAGGTGCTCATAGAG 59.598 45.833 0.00 0.00 34.88 2.43
118 119 4.159321 CAGTCTCTTGAAGGTGCTCATAGA 59.841 45.833 0.00 0.00 0.00 1.98
123 124 2.930455 GCTCAGTCTCTTGAAGGTGCTC 60.930 54.545 0.00 0.00 0.00 4.26
180 181 1.168407 ATATGAGCGCATGTGTGGCC 61.168 55.000 13.71 0.00 35.94 5.36
196 197 4.083110 GGGTGAGTGTACGCGTGTATATAT 60.083 45.833 24.59 2.82 32.11 0.86
208 209 4.243270 GTGTGTTCATAGGGTGAGTGTAC 58.757 47.826 0.00 0.00 38.29 2.90
212 213 3.055094 GGATGTGTGTTCATAGGGTGAGT 60.055 47.826 0.00 0.00 38.29 3.41
214 215 2.238646 GGGATGTGTGTTCATAGGGTGA 59.761 50.000 0.00 0.00 34.25 4.02
216 217 2.274542 TGGGATGTGTGTTCATAGGGT 58.725 47.619 0.00 0.00 0.00 4.34
219 220 4.155063 TGGATGGGATGTGTGTTCATAG 57.845 45.455 0.00 0.00 0.00 2.23
220 221 4.794311 ATGGATGGGATGTGTGTTCATA 57.206 40.909 0.00 0.00 0.00 2.15
221 222 3.675348 ATGGATGGGATGTGTGTTCAT 57.325 42.857 0.00 0.00 0.00 2.57
234 235 2.567169 TCGGAGGTGCTTATATGGATGG 59.433 50.000 0.00 0.00 0.00 3.51
235 236 3.511540 TCTCGGAGGTGCTTATATGGATG 59.488 47.826 4.96 0.00 0.00 3.51
239 240 4.950050 AGTTTCTCGGAGGTGCTTATATG 58.050 43.478 4.96 0.00 0.00 1.78
240 241 6.324254 AGTTAGTTTCTCGGAGGTGCTTATAT 59.676 38.462 4.96 0.00 0.00 0.86
244 245 2.633481 AGTTAGTTTCTCGGAGGTGCTT 59.367 45.455 4.96 0.00 0.00 3.91
262 263 7.201644 CGTCAAACTCAAGATAATATGCCAGTT 60.202 37.037 0.00 0.00 0.00 3.16
264 265 6.479990 TCGTCAAACTCAAGATAATATGCCAG 59.520 38.462 0.00 0.00 0.00 4.85
265 266 6.345298 TCGTCAAACTCAAGATAATATGCCA 58.655 36.000 0.00 0.00 0.00 4.92
266 267 6.844696 TCGTCAAACTCAAGATAATATGCC 57.155 37.500 0.00 0.00 0.00 4.40
271 272 7.012894 TGGTGTTTTCGTCAAACTCAAGATAAT 59.987 33.333 12.22 0.00 44.68 1.28
272 273 6.316640 TGGTGTTTTCGTCAAACTCAAGATAA 59.683 34.615 12.22 0.00 44.68 1.75
331 333 2.021380 GCGATGCGCGTTTAGTGG 59.979 61.111 8.43 0.00 44.55 4.00
357 359 9.535270 GCTCGCATTATTCTAGATTTATTTCAC 57.465 33.333 0.00 0.00 0.00 3.18
377 379 1.895020 ATTAAGTCCCGGTGCTCGCA 61.895 55.000 0.00 0.00 37.59 5.10
401 403 2.188469 CCGTATCCCCAACCCACG 59.812 66.667 0.00 0.00 0.00 4.94
406 408 2.202974 GACGGCCGTATCCCCAAC 60.203 66.667 34.36 12.75 0.00 3.77
407 409 3.472726 GGACGGCCGTATCCCCAA 61.473 66.667 34.36 0.00 0.00 4.12
412 414 3.693085 TGATTATAGAGGACGGCCGTATC 59.307 47.826 34.36 30.12 39.96 2.24
417 419 2.832129 TGGATGATTATAGAGGACGGCC 59.168 50.000 0.00 0.00 0.00 6.13
418 420 4.537135 TTGGATGATTATAGAGGACGGC 57.463 45.455 0.00 0.00 0.00 5.68
437 439 5.929697 ATATGCGAACCTATGTGTGATTG 57.070 39.130 0.00 0.00 0.00 2.67
473 475 4.939509 TTTGGCTAATCGCTACAAAGAC 57.060 40.909 0.00 0.00 39.13 3.01
474 476 6.346096 ACTATTTGGCTAATCGCTACAAAGA 58.654 36.000 0.00 0.00 34.68 2.52
529 2310 0.465460 GGTGTTTGGTCCTCACTGCA 60.465 55.000 10.50 0.00 33.30 4.41
583 2364 7.064728 GGAGATTGTTGTACAAGACATTAGGTC 59.935 40.741 8.98 0.00 41.94 3.85
584 2365 6.879458 GGAGATTGTTGTACAAGACATTAGGT 59.121 38.462 8.98 0.00 41.94 3.08
585 2366 6.316390 GGGAGATTGTTGTACAAGACATTAGG 59.684 42.308 8.98 0.00 41.94 2.69
586 2367 6.878923 TGGGAGATTGTTGTACAAGACATTAG 59.121 38.462 8.98 0.00 41.94 1.73
587 2368 6.774673 TGGGAGATTGTTGTACAAGACATTA 58.225 36.000 8.98 0.00 41.94 1.90
588 2369 5.630121 TGGGAGATTGTTGTACAAGACATT 58.370 37.500 8.98 1.63 41.94 2.71
589 2370 5.241403 TGGGAGATTGTTGTACAAGACAT 57.759 39.130 8.98 4.51 41.94 3.06
590 2371 4.698201 TGGGAGATTGTTGTACAAGACA 57.302 40.909 8.98 1.91 41.94 3.41
591 2372 5.305585 TCTTGGGAGATTGTTGTACAAGAC 58.694 41.667 8.98 0.00 41.94 3.01
592 2373 5.560722 TCTTGGGAGATTGTTGTACAAGA 57.439 39.130 8.98 4.62 41.94 3.02
593 2374 6.633500 TTTCTTGGGAGATTGTTGTACAAG 57.367 37.500 8.98 0.00 41.94 3.16
594 2375 6.459024 CGTTTTCTTGGGAGATTGTTGTACAA 60.459 38.462 3.59 3.59 42.95 2.41
595 2376 5.008217 CGTTTTCTTGGGAGATTGTTGTACA 59.992 40.000 0.00 0.00 0.00 2.90
596 2377 5.008316 ACGTTTTCTTGGGAGATTGTTGTAC 59.992 40.000 0.00 0.00 0.00 2.90
597 2378 5.127491 ACGTTTTCTTGGGAGATTGTTGTA 58.873 37.500 0.00 0.00 0.00 2.41
598 2379 3.951680 ACGTTTTCTTGGGAGATTGTTGT 59.048 39.130 0.00 0.00 0.00 3.32
599 2380 4.275936 AGACGTTTTCTTGGGAGATTGTTG 59.724 41.667 0.00 0.00 0.00 3.33
600 2381 4.461198 AGACGTTTTCTTGGGAGATTGTT 58.539 39.130 0.00 0.00 0.00 2.83
601 2382 4.086706 AGACGTTTTCTTGGGAGATTGT 57.913 40.909 0.00 0.00 0.00 2.71
611 2392 5.296035 CCCTTCTTGTACAAGACGTTTTCTT 59.704 40.000 32.81 0.00 46.13 2.52
612 2393 4.814771 CCCTTCTTGTACAAGACGTTTTCT 59.185 41.667 32.81 0.00 46.13 2.52
613 2394 4.812626 TCCCTTCTTGTACAAGACGTTTTC 59.187 41.667 32.81 0.00 46.13 2.29
614 2395 4.773013 TCCCTTCTTGTACAAGACGTTTT 58.227 39.130 32.81 0.00 46.13 2.43
615 2396 4.411256 TCCCTTCTTGTACAAGACGTTT 57.589 40.909 32.81 0.00 46.13 3.60
616 2397 4.411256 TTCCCTTCTTGTACAAGACGTT 57.589 40.909 32.81 0.00 46.13 3.99
617 2398 4.411256 TTTCCCTTCTTGTACAAGACGT 57.589 40.909 32.81 0.00 46.13 4.34
618 2399 5.744666 TTTTTCCCTTCTTGTACAAGACG 57.255 39.130 32.81 29.68 46.13 4.18
640 2421 8.445588 TCTACTTCCTCTTAACCAAGGATTTTT 58.554 33.333 0.00 0.00 41.26 1.94
641 2422 7.985589 TCTACTTCCTCTTAACCAAGGATTTT 58.014 34.615 0.00 0.00 41.26 1.82
642 2423 7.569599 TCTACTTCCTCTTAACCAAGGATTT 57.430 36.000 0.00 0.00 41.26 2.17
643 2424 7.237887 AGTTCTACTTCCTCTTAACCAAGGATT 59.762 37.037 0.00 0.00 41.26 3.01
644 2425 6.731448 AGTTCTACTTCCTCTTAACCAAGGAT 59.269 38.462 0.00 0.00 41.26 3.24
645 2426 6.082707 AGTTCTACTTCCTCTTAACCAAGGA 58.917 40.000 0.00 0.00 39.94 3.36
646 2427 6.361768 AGTTCTACTTCCTCTTAACCAAGG 57.638 41.667 0.00 0.00 32.22 3.61
647 2428 7.036829 GCTAGTTCTACTTCCTCTTAACCAAG 58.963 42.308 0.00 0.00 0.00 3.61
648 2429 6.724905 AGCTAGTTCTACTTCCTCTTAACCAA 59.275 38.462 0.00 0.00 0.00 3.67
649 2430 6.254522 AGCTAGTTCTACTTCCTCTTAACCA 58.745 40.000 0.00 0.00 0.00 3.67
650 2431 6.778834 AGCTAGTTCTACTTCCTCTTAACC 57.221 41.667 0.00 0.00 0.00 2.85
726 2713 1.447217 CACTATGGGATGCTGGCGA 59.553 57.895 0.00 0.00 0.00 5.54
736 2723 2.572095 TTCGGCTCGTGCACTATGGG 62.572 60.000 16.19 0.00 41.91 4.00
738 2725 1.787155 GTATTCGGCTCGTGCACTATG 59.213 52.381 16.19 5.78 41.91 2.23
741 2737 1.516386 CGTATTCGGCTCGTGCACT 60.516 57.895 16.19 0.00 41.91 4.40
791 2814 3.981071 TGTACAAGGTATTCTGCTGCT 57.019 42.857 0.00 0.00 0.00 4.24
792 2815 3.751175 TGTTGTACAAGGTATTCTGCTGC 59.249 43.478 8.98 0.00 0.00 5.25
896 2921 5.159209 GCGGTATGTATATATATGCCCGAC 58.841 45.833 24.02 16.14 0.00 4.79
897 2922 4.828387 TGCGGTATGTATATATATGCCCGA 59.172 41.667 24.02 10.39 0.00 5.14
898 2923 5.128992 TGCGGTATGTATATATATGCCCG 57.871 43.478 17.16 18.34 0.00 6.13
899 2924 4.929808 GCTGCGGTATGTATATATATGCCC 59.070 45.833 17.16 11.98 0.00 5.36
900 2925 5.784177 AGCTGCGGTATGTATATATATGCC 58.216 41.667 14.22 14.22 0.00 4.40
901 2926 6.528423 GCTAGCTGCGGTATGTATATATATGC 59.472 42.308 7.70 4.69 0.00 3.14
919 2944 3.717400 TGAGAACGGATTAGCTAGCTG 57.283 47.619 27.68 12.41 0.00 4.24
951 2976 1.817357 GTAAAGGGGGTTGAGAACGG 58.183 55.000 0.00 0.00 0.00 4.44
952 2977 1.001181 TCGTAAAGGGGGTTGAGAACG 59.999 52.381 0.00 0.00 0.00 3.95
954 2979 2.907696 TGATCGTAAAGGGGGTTGAGAA 59.092 45.455 0.00 0.00 0.00 2.87
959 3001 0.622136 GGGTGATCGTAAAGGGGGTT 59.378 55.000 0.00 0.00 0.00 4.11
1009 3060 2.580601 CCTTCACCTTCCCGGACGT 61.581 63.158 0.73 0.00 36.31 4.34
1028 3079 1.153369 TGCTCGCCCACTATTGCTC 60.153 57.895 0.00 0.00 0.00 4.26
1032 3083 0.905357 AGAACTGCTCGCCCACTATT 59.095 50.000 0.00 0.00 0.00 1.73
1065 3116 4.052229 AACTCCGTCGGGTGCGAG 62.052 66.667 12.29 3.20 33.83 5.03
1066 3117 4.351938 CAACTCCGTCGGGTGCGA 62.352 66.667 12.29 0.00 33.83 5.10
1078 3129 6.147328 GTGTATAACTTGGTCACCTTCAACTC 59.853 42.308 0.00 0.00 0.00 3.01
1085 3136 2.574824 GGGGTGTATAACTTGGTCACCT 59.425 50.000 11.48 0.00 45.21 4.00
1110 3161 1.153147 GAAGGTGAATCTCGGCCCC 60.153 63.158 0.00 0.00 0.00 5.80
1223 3301 2.876368 GATCACCGGTTGGGCTGAGG 62.876 65.000 2.97 0.00 40.62 3.86
1224 3302 1.450312 GATCACCGGTTGGGCTGAG 60.450 63.158 2.97 0.00 40.62 3.35
1225 3303 2.668632 GATCACCGGTTGGGCTGA 59.331 61.111 2.97 0.00 40.62 4.26
1226 3304 2.438434 GGATCACCGGTTGGGCTG 60.438 66.667 2.97 0.00 40.62 4.85
1227 3305 2.270874 GATGGATCACCGGTTGGGCT 62.271 60.000 2.97 0.00 40.62 5.19
1228 3306 1.823899 GATGGATCACCGGTTGGGC 60.824 63.158 2.97 0.00 40.62 5.36
1261 3339 1.028330 TCCCACTTACGCTCGTCGAT 61.028 55.000 0.00 0.00 41.67 3.59
1355 3433 0.464036 TTCGATCTTGGTCCCCATCG 59.536 55.000 7.55 7.55 35.61 3.84
1419 3542 1.080093 GGAGTTGCCATCGACGACA 60.080 57.895 0.00 0.00 36.34 4.35
1468 3618 2.167900 GGTAGTAGTTGCCAAGGACGAT 59.832 50.000 0.00 0.00 0.00 3.73
1803 3955 1.396301 GCATGCTCAGAAACTTCCGAG 59.604 52.381 11.37 0.00 35.36 4.63
1809 3961 2.472695 TAACCGCATGCTCAGAAACT 57.527 45.000 17.13 0.00 0.00 2.66
1814 3966 3.809279 TGATTACATAACCGCATGCTCAG 59.191 43.478 17.13 6.91 0.00 3.35
1825 3977 7.875327 ACCTAAACCATGGTGATTACATAAC 57.125 36.000 20.60 0.00 34.90 1.89
1836 3988 4.959839 ACTCACAAAAACCTAAACCATGGT 59.040 37.500 13.00 13.00 38.35 3.55
1933 4085 9.747898 TTTCTTGGTTCCTTTTCTATTATGCTA 57.252 29.630 0.00 0.00 0.00 3.49
1934 4086 8.650143 TTTCTTGGTTCCTTTTCTATTATGCT 57.350 30.769 0.00 0.00 0.00 3.79
1935 4087 9.358872 CTTTTCTTGGTTCCTTTTCTATTATGC 57.641 33.333 0.00 0.00 0.00 3.14
1936 4088 9.358872 GCTTTTCTTGGTTCCTTTTCTATTATG 57.641 33.333 0.00 0.00 0.00 1.90
1938 4090 8.472007 TGCTTTTCTTGGTTCCTTTTCTATTA 57.528 30.769 0.00 0.00 0.00 0.98
1939 4091 7.360113 TGCTTTTCTTGGTTCCTTTTCTATT 57.640 32.000 0.00 0.00 0.00 1.73
1940 4092 6.517362 GCTGCTTTTCTTGGTTCCTTTTCTAT 60.517 38.462 0.00 0.00 0.00 1.98
1997 4149 1.812571 CTGCAAAAGCCCGTAGACATT 59.187 47.619 0.00 0.00 0.00 2.71
2005 4157 2.291741 GGATCTAATCTGCAAAAGCCCG 59.708 50.000 0.00 0.00 0.00 6.13
2023 4175 6.769822 ACGAGCTTTTAATCATCTTGATGGAT 59.230 34.615 10.29 3.33 37.15 3.41
2042 4194 1.519408 ACGCCAAACATTTACGAGCT 58.481 45.000 0.00 0.00 0.00 4.09
2058 4210 0.040425 AAGGCGATGTCAACAAACGC 60.040 50.000 21.11 21.11 46.41 4.84
2063 4215 0.874390 GAAGCAAGGCGATGTCAACA 59.126 50.000 0.00 0.00 0.00 3.33
2065 4217 0.320334 TCGAAGCAAGGCGATGTCAA 60.320 50.000 0.00 0.00 0.00 3.18
2073 4225 6.903419 AGCTAATATATTTTCGAAGCAAGGC 58.097 36.000 15.97 0.00 0.00 4.35
2076 4228 8.888716 TCACAAGCTAATATATTTTCGAAGCAA 58.111 29.630 15.97 0.00 0.00 3.91
2088 4240 4.301072 GGGGGCATCACAAGCTAATATA 57.699 45.455 0.00 0.00 0.00 0.86
2089 4241 3.160679 GGGGGCATCACAAGCTAATAT 57.839 47.619 0.00 0.00 0.00 1.28
2091 4243 3.520623 GGGGGCATCACAAGCTAAT 57.479 52.632 0.00 0.00 0.00 1.73
2158 4516 9.317936 AGGTTGATTTTTCTGAAAGTTTGAATC 57.682 29.630 13.63 13.63 33.76 2.52
2217 4575 2.306847 GACCTGCCAGTTCCTCAAAAA 58.693 47.619 0.00 0.00 0.00 1.94
2218 4576 1.214175 TGACCTGCCAGTTCCTCAAAA 59.786 47.619 0.00 0.00 0.00 2.44
2219 4577 0.843309 TGACCTGCCAGTTCCTCAAA 59.157 50.000 0.00 0.00 0.00 2.69
2223 4581 1.757306 CAGTGACCTGCCAGTTCCT 59.243 57.895 0.00 0.00 0.00 3.36
2224 4582 4.386413 CAGTGACCTGCCAGTTCC 57.614 61.111 0.00 0.00 0.00 3.62
2232 4590 6.701340 TGCTTAATATATAGGCAGTGACCTG 58.299 40.000 14.24 0.00 41.34 4.00
2233 4591 6.070538 CCTGCTTAATATATAGGCAGTGACCT 60.071 42.308 21.87 10.40 45.92 3.85
2234 4592 6.070767 TCCTGCTTAATATATAGGCAGTGACC 60.071 42.308 21.87 0.00 45.92 4.02
2235 4593 6.936279 TCCTGCTTAATATATAGGCAGTGAC 58.064 40.000 21.87 0.00 45.92 3.67
2236 4594 6.954102 TCTCCTGCTTAATATATAGGCAGTGA 59.046 38.462 21.87 18.20 45.92 3.41
2238 4596 7.798710 TTCTCCTGCTTAATATATAGGCAGT 57.201 36.000 21.87 0.00 45.92 4.40
2239 4597 9.160496 CTTTTCTCCTGCTTAATATATAGGCAG 57.840 37.037 19.15 19.15 46.62 4.85
2240 4598 8.660435 ACTTTTCTCCTGCTTAATATATAGGCA 58.340 33.333 6.89 6.89 0.00 4.75
2252 4610 8.914011 ACTATTTGTTTTACTTTTCTCCTGCTT 58.086 29.630 0.00 0.00 0.00 3.91
2254 4612 9.181805 GAACTATTTGTTTTACTTTTCTCCTGC 57.818 33.333 0.00 0.00 39.30 4.85
2267 4625 7.431084 CGCTGTGTTGTAAGAACTATTTGTTTT 59.569 33.333 0.00 0.00 39.30 2.43
2269 4627 6.037830 ACGCTGTGTTGTAAGAACTATTTGTT 59.962 34.615 0.00 0.00 42.38 2.83
2271 4629 5.985781 ACGCTGTGTTGTAAGAACTATTTG 58.014 37.500 0.00 0.00 0.00 2.32
2272 4630 6.613755 AACGCTGTGTTGTAAGAACTATTT 57.386 33.333 5.69 0.00 40.00 1.40
2273 4631 6.702723 TGTAACGCTGTGTTGTAAGAACTATT 59.297 34.615 16.33 0.00 42.01 1.73
2274 4632 6.218019 TGTAACGCTGTGTTGTAAGAACTAT 58.782 36.000 16.33 0.00 42.01 2.12
2277 4635 4.782252 TGTAACGCTGTGTTGTAAGAAC 57.218 40.909 16.33 6.22 42.01 3.01
2278 4636 5.994887 ATTGTAACGCTGTGTTGTAAGAA 57.005 34.783 16.33 2.52 42.01 2.52
2280 4638 7.569297 TCTTAATTGTAACGCTGTGTTGTAAG 58.431 34.615 16.33 13.70 42.01 2.34
2281 4639 7.225145 ACTCTTAATTGTAACGCTGTGTTGTAA 59.775 33.333 16.33 11.08 42.01 2.41
2282 4640 6.702723 ACTCTTAATTGTAACGCTGTGTTGTA 59.297 34.615 16.33 2.79 42.01 2.41
2283 4641 5.526111 ACTCTTAATTGTAACGCTGTGTTGT 59.474 36.000 16.33 0.00 42.01 3.32
2284 4642 5.985781 ACTCTTAATTGTAACGCTGTGTTG 58.014 37.500 16.33 0.00 42.01 3.33
2286 4644 6.684686 TCTACTCTTAATTGTAACGCTGTGT 58.315 36.000 0.00 0.00 0.00 3.72
2287 4645 7.576750 TTCTACTCTTAATTGTAACGCTGTG 57.423 36.000 0.00 0.00 0.00 3.66
2288 4646 7.871463 ACTTTCTACTCTTAATTGTAACGCTGT 59.129 33.333 0.00 0.00 0.00 4.40
2289 4647 8.240883 ACTTTCTACTCTTAATTGTAACGCTG 57.759 34.615 0.00 0.00 0.00 5.18
2290 4648 8.305317 AGACTTTCTACTCTTAATTGTAACGCT 58.695 33.333 0.00 0.00 0.00 5.07
2291 4649 8.463456 AGACTTTCTACTCTTAATTGTAACGC 57.537 34.615 0.00 0.00 0.00 4.84
2298 4656 8.471609 GCCAGACTAGACTTTCTACTCTTAATT 58.528 37.037 0.00 0.00 0.00 1.40
2299 4657 7.837187 AGCCAGACTAGACTTTCTACTCTTAAT 59.163 37.037 0.00 0.00 0.00 1.40
2300 4658 7.176490 AGCCAGACTAGACTTTCTACTCTTAA 58.824 38.462 0.00 0.00 0.00 1.85
2302 4660 5.576128 AGCCAGACTAGACTTTCTACTCTT 58.424 41.667 0.00 0.00 0.00 2.85
2303 4661 5.187621 AGCCAGACTAGACTTTCTACTCT 57.812 43.478 0.00 0.00 0.00 3.24
2304 4662 4.944930 TGAGCCAGACTAGACTTTCTACTC 59.055 45.833 0.00 0.65 0.00 2.59
2305 4663 4.924625 TGAGCCAGACTAGACTTTCTACT 58.075 43.478 0.00 0.00 0.00 2.57
2308 4666 3.096092 CCTGAGCCAGACTAGACTTTCT 58.904 50.000 0.00 0.00 32.44 2.52
2309 4667 2.829120 ACCTGAGCCAGACTAGACTTTC 59.171 50.000 0.00 0.00 32.44 2.62
2310 4668 2.896039 ACCTGAGCCAGACTAGACTTT 58.104 47.619 0.00 0.00 32.44 2.66
2311 4669 2.614134 ACCTGAGCCAGACTAGACTT 57.386 50.000 0.00 0.00 32.44 3.01
2312 4670 2.614134 AACCTGAGCCAGACTAGACT 57.386 50.000 0.00 0.00 32.44 3.24
2313 4671 3.330267 CAAAACCTGAGCCAGACTAGAC 58.670 50.000 0.00 0.00 32.44 2.59
2315 4673 2.039084 ACCAAAACCTGAGCCAGACTAG 59.961 50.000 4.00 0.00 32.44 2.57
2316 4674 2.054799 ACCAAAACCTGAGCCAGACTA 58.945 47.619 4.00 0.00 32.44 2.59
2319 4677 1.691196 CAACCAAAACCTGAGCCAGA 58.309 50.000 4.00 0.00 32.44 3.86
2321 4679 0.032615 ACCAACCAAAACCTGAGCCA 60.033 50.000 0.00 0.00 0.00 4.75
2323 4681 2.031870 AGAACCAACCAAAACCTGAGC 58.968 47.619 0.00 0.00 0.00 4.26
2324 4682 3.287222 TGAGAACCAACCAAAACCTGAG 58.713 45.455 0.00 0.00 0.00 3.35
2325 4683 3.374042 TGAGAACCAACCAAAACCTGA 57.626 42.857 0.00 0.00 0.00 3.86
2335 4693 7.063544 CACTAGCTTAGTATGTTGAGAACCAAC 59.936 40.741 0.00 0.00 44.96 3.77
2336 4694 7.039293 TCACTAGCTTAGTATGTTGAGAACCAA 60.039 37.037 0.00 0.00 37.23 3.67
2337 4695 6.436218 TCACTAGCTTAGTATGTTGAGAACCA 59.564 38.462 0.00 0.00 37.23 3.67
2338 4696 6.864342 TCACTAGCTTAGTATGTTGAGAACC 58.136 40.000 0.00 0.00 37.23 3.62
2339 4697 7.763356 TCTCACTAGCTTAGTATGTTGAGAAC 58.237 38.462 0.00 0.00 37.23 3.01
2340 4698 7.939784 TCTCACTAGCTTAGTATGTTGAGAA 57.060 36.000 0.00 0.00 37.23 2.87
2341 4699 7.775561 TCATCTCACTAGCTTAGTATGTTGAGA 59.224 37.037 0.00 0.00 37.30 3.27
2342 4700 7.935520 TCATCTCACTAGCTTAGTATGTTGAG 58.064 38.462 0.00 0.00 37.23 3.02
2343 4701 7.881775 TCATCTCACTAGCTTAGTATGTTGA 57.118 36.000 0.00 0.00 37.23 3.18
2344 4702 8.932945 TTTCATCTCACTAGCTTAGTATGTTG 57.067 34.615 0.00 0.00 37.23 3.33
2345 4703 7.708752 GCTTTCATCTCACTAGCTTAGTATGTT 59.291 37.037 0.00 0.00 37.23 2.71
2346 4704 7.147828 TGCTTTCATCTCACTAGCTTAGTATGT 60.148 37.037 0.00 0.00 37.23 2.29
2347 4705 7.205992 TGCTTTCATCTCACTAGCTTAGTATG 58.794 38.462 0.00 0.00 37.23 2.39
2348 4706 7.353414 TGCTTTCATCTCACTAGCTTAGTAT 57.647 36.000 0.00 0.00 37.23 2.12
2349 4707 6.775594 TGCTTTCATCTCACTAGCTTAGTA 57.224 37.500 0.00 0.00 37.23 1.82
2350 4708 5.667539 TGCTTTCATCTCACTAGCTTAGT 57.332 39.130 0.00 0.00 40.28 2.24
2351 4709 6.867816 CCTATGCTTTCATCTCACTAGCTTAG 59.132 42.308 0.00 0.00 38.39 2.18
2352 4710 6.325028 ACCTATGCTTTCATCTCACTAGCTTA 59.675 38.462 0.00 0.00 34.22 3.09
2353 4711 5.130145 ACCTATGCTTTCATCTCACTAGCTT 59.870 40.000 0.00 0.00 34.22 3.74
2354 4712 4.653341 ACCTATGCTTTCATCTCACTAGCT 59.347 41.667 0.00 0.00 34.22 3.32
2355 4713 4.954875 ACCTATGCTTTCATCTCACTAGC 58.045 43.478 0.00 0.00 34.22 3.42
2356 4714 6.577103 TCAACCTATGCTTTCATCTCACTAG 58.423 40.000 0.00 0.00 34.22 2.57
2357 4715 6.544928 TCAACCTATGCTTTCATCTCACTA 57.455 37.500 0.00 0.00 34.22 2.74
2358 4716 5.426689 TCAACCTATGCTTTCATCTCACT 57.573 39.130 0.00 0.00 34.22 3.41
2359 4717 5.877012 TCTTCAACCTATGCTTTCATCTCAC 59.123 40.000 0.00 0.00 34.22 3.51
2360 4718 6.053632 TCTTCAACCTATGCTTTCATCTCA 57.946 37.500 0.00 0.00 34.22 3.27
2361 4719 6.992063 TTCTTCAACCTATGCTTTCATCTC 57.008 37.500 0.00 0.00 34.22 2.75
2362 4720 7.951347 AATTCTTCAACCTATGCTTTCATCT 57.049 32.000 0.00 0.00 34.22 2.90
2363 4721 7.704047 GGAAATTCTTCAACCTATGCTTTCATC 59.296 37.037 0.00 0.00 32.21 2.92
2364 4722 7.398332 AGGAAATTCTTCAACCTATGCTTTCAT 59.602 33.333 0.00 0.00 33.54 2.57
2365 4723 6.721208 AGGAAATTCTTCAACCTATGCTTTCA 59.279 34.615 0.00 0.00 32.75 2.69
2366 4724 7.031975 CAGGAAATTCTTCAACCTATGCTTTC 58.968 38.462 0.00 0.00 32.75 2.62
2367 4725 6.071165 CCAGGAAATTCTTCAACCTATGCTTT 60.071 38.462 0.00 0.00 32.75 3.51
2368 4726 5.420104 CCAGGAAATTCTTCAACCTATGCTT 59.580 40.000 0.00 0.00 32.75 3.91
2369 4727 4.952335 CCAGGAAATTCTTCAACCTATGCT 59.048 41.667 0.00 0.00 32.75 3.79
2370 4728 4.706962 ACCAGGAAATTCTTCAACCTATGC 59.293 41.667 0.00 0.00 32.75 3.14
2371 4729 6.434028 TCAACCAGGAAATTCTTCAACCTATG 59.566 38.462 0.00 0.00 32.75 2.23
2372 4730 6.552008 TCAACCAGGAAATTCTTCAACCTAT 58.448 36.000 0.00 0.00 32.75 2.57
2373 4731 5.947663 TCAACCAGGAAATTCTTCAACCTA 58.052 37.500 0.00 0.00 32.75 3.08
2374 4732 4.803452 TCAACCAGGAAATTCTTCAACCT 58.197 39.130 0.00 0.00 32.75 3.50
2375 4733 5.243730 TCATCAACCAGGAAATTCTTCAACC 59.756 40.000 0.00 0.00 32.75 3.77
2376 4734 6.331369 TCATCAACCAGGAAATTCTTCAAC 57.669 37.500 0.00 0.00 32.75 3.18
2377 4735 5.477984 CCTCATCAACCAGGAAATTCTTCAA 59.522 40.000 0.00 0.00 32.75 2.69
2378 4736 5.012239 CCTCATCAACCAGGAAATTCTTCA 58.988 41.667 0.00 0.00 32.75 3.02
2379 4737 5.256474 TCCTCATCAACCAGGAAATTCTTC 58.744 41.667 0.00 0.00 35.75 2.87
2380 4738 5.014544 TCTCCTCATCAACCAGGAAATTCTT 59.985 40.000 0.00 0.00 38.39 2.52
2381 4739 4.537688 TCTCCTCATCAACCAGGAAATTCT 59.462 41.667 0.00 0.00 38.39 2.40
2382 4740 4.848357 TCTCCTCATCAACCAGGAAATTC 58.152 43.478 0.00 0.00 38.39 2.17
2383 4741 4.934797 TCTCCTCATCAACCAGGAAATT 57.065 40.909 0.00 0.00 38.39 1.82
2384 4742 4.853007 CTTCTCCTCATCAACCAGGAAAT 58.147 43.478 0.00 0.00 38.39 2.17
2385 4743 3.560025 GCTTCTCCTCATCAACCAGGAAA 60.560 47.826 0.00 0.00 38.39 3.13
2386 4744 2.026822 GCTTCTCCTCATCAACCAGGAA 60.027 50.000 0.00 0.00 38.39 3.36
2387 4745 1.556911 GCTTCTCCTCATCAACCAGGA 59.443 52.381 0.00 0.00 37.27 3.86
2388 4746 1.280133 TGCTTCTCCTCATCAACCAGG 59.720 52.381 0.00 0.00 0.00 4.45
2389 4747 2.289882 TGTGCTTCTCCTCATCAACCAG 60.290 50.000 0.00 0.00 0.00 4.00
2390 4748 1.699083 TGTGCTTCTCCTCATCAACCA 59.301 47.619 0.00 0.00 0.00 3.67
2391 4749 2.079925 GTGTGCTTCTCCTCATCAACC 58.920 52.381 0.00 0.00 0.00 3.77
2392 4750 2.079925 GGTGTGCTTCTCCTCATCAAC 58.920 52.381 0.00 0.00 0.00 3.18
2393 4751 1.003580 GGGTGTGCTTCTCCTCATCAA 59.996 52.381 0.00 0.00 0.00 2.57
2394 4752 0.615331 GGGTGTGCTTCTCCTCATCA 59.385 55.000 0.00 0.00 0.00 3.07
2395 4753 0.908198 AGGGTGTGCTTCTCCTCATC 59.092 55.000 0.00 0.00 0.00 2.92
2396 4754 0.617413 CAGGGTGTGCTTCTCCTCAT 59.383 55.000 0.00 0.00 0.00 2.90
2397 4755 2.061220 CAGGGTGTGCTTCTCCTCA 58.939 57.895 0.00 0.00 0.00 3.86
2407 4765 0.954449 CTCTTGCTGAGCAGGGTGTG 60.954 60.000 16.75 1.61 40.61 3.82
2408 4766 1.374190 CTCTTGCTGAGCAGGGTGT 59.626 57.895 16.75 0.00 40.61 4.16
2409 4767 0.673022 GACTCTTGCTGAGCAGGGTG 60.673 60.000 16.75 11.95 46.41 4.61
2410 4768 0.835543 AGACTCTTGCTGAGCAGGGT 60.836 55.000 16.75 12.43 46.41 4.34
2411 4769 0.324285 AAGACTCTTGCTGAGCAGGG 59.676 55.000 16.75 9.25 46.41 4.45
2412 4770 3.196463 CATAAGACTCTTGCTGAGCAGG 58.804 50.000 10.61 10.61 46.41 4.85
2413 4771 2.608546 GCATAAGACTCTTGCTGAGCAG 59.391 50.000 7.39 2.24 46.41 4.24
2414 4772 2.235650 AGCATAAGACTCTTGCTGAGCA 59.764 45.455 1.40 1.40 44.63 4.26
2415 4773 2.865551 GAGCATAAGACTCTTGCTGAGC 59.134 50.000 14.82 0.00 46.21 4.26
2416 4774 3.114809 CGAGCATAAGACTCTTGCTGAG 58.885 50.000 14.82 6.92 46.21 3.35
2417 4775 2.755103 TCGAGCATAAGACTCTTGCTGA 59.245 45.455 14.82 10.42 46.21 4.26
2418 4776 3.156511 TCGAGCATAAGACTCTTGCTG 57.843 47.619 14.82 4.83 46.21 4.41
2420 4778 4.147306 CGTATTCGAGCATAAGACTCTTGC 59.853 45.833 1.17 0.00 39.71 4.01
2421 4779 4.147306 GCGTATTCGAGCATAAGACTCTTG 59.853 45.833 1.17 0.00 39.71 3.02
2422 4780 4.291783 GCGTATTCGAGCATAAGACTCTT 58.708 43.478 0.00 0.00 39.71 2.85
2423 4781 3.607310 CGCGTATTCGAGCATAAGACTCT 60.607 47.826 0.00 0.00 39.71 3.24
2424 4782 2.652642 CGCGTATTCGAGCATAAGACTC 59.347 50.000 0.00 0.00 39.71 3.36
2425 4783 2.033049 ACGCGTATTCGAGCATAAGACT 59.967 45.455 11.67 0.00 40.29 3.24
2426 4784 2.382519 ACGCGTATTCGAGCATAAGAC 58.617 47.619 11.67 0.00 40.29 3.01
2427 4785 2.289820 AGACGCGTATTCGAGCATAAGA 59.710 45.455 13.97 0.00 40.29 2.10
2428 4786 2.402049 CAGACGCGTATTCGAGCATAAG 59.598 50.000 13.97 0.00 40.29 1.73
2429 4787 2.381589 CAGACGCGTATTCGAGCATAA 58.618 47.619 13.97 0.00 40.29 1.90
2430 4788 1.334689 CCAGACGCGTATTCGAGCATA 60.335 52.381 13.97 0.00 40.29 3.14
2431 4789 0.595053 CCAGACGCGTATTCGAGCAT 60.595 55.000 13.97 0.00 40.29 3.79
2432 4790 1.226575 CCAGACGCGTATTCGAGCA 60.227 57.895 13.97 0.00 40.29 4.26
2433 4791 0.801067 AACCAGACGCGTATTCGAGC 60.801 55.000 13.97 0.00 40.29 5.03
2434 4792 0.914551 CAACCAGACGCGTATTCGAG 59.085 55.000 13.97 0.00 42.20 4.04
2435 4793 0.522626 TCAACCAGACGCGTATTCGA 59.477 50.000 13.97 1.02 39.71 3.71
2436 4794 1.255342 CATCAACCAGACGCGTATTCG 59.745 52.381 13.97 3.54 40.37 3.34
2437 4795 2.535984 CTCATCAACCAGACGCGTATTC 59.464 50.000 13.97 0.00 0.00 1.75
2438 4796 2.540515 CTCATCAACCAGACGCGTATT 58.459 47.619 13.97 0.00 0.00 1.89
2439 4797 1.202417 CCTCATCAACCAGACGCGTAT 60.202 52.381 13.97 5.94 0.00 3.06
2440 4798 0.172578 CCTCATCAACCAGACGCGTA 59.827 55.000 13.97 0.00 0.00 4.42
2441 4799 1.079819 CCTCATCAACCAGACGCGT 60.080 57.895 13.85 13.85 0.00 6.01
2442 4800 0.803768 CTCCTCATCAACCAGACGCG 60.804 60.000 3.53 3.53 0.00 6.01
2443 4801 0.532573 TCTCCTCATCAACCAGACGC 59.467 55.000 0.00 0.00 0.00 5.19
2444 4802 3.319137 TTTCTCCTCATCAACCAGACG 57.681 47.619 0.00 0.00 0.00 4.18
2445 4803 3.753797 GGTTTTCTCCTCATCAACCAGAC 59.246 47.826 0.00 0.00 37.44 3.51
2446 4804 3.394274 TGGTTTTCTCCTCATCAACCAGA 59.606 43.478 0.00 0.00 41.57 3.86
2447 4805 3.754965 TGGTTTTCTCCTCATCAACCAG 58.245 45.455 0.00 0.00 41.57 4.00
2448 4806 3.874383 TGGTTTTCTCCTCATCAACCA 57.126 42.857 0.00 0.00 43.69 3.67
2449 4807 5.728637 ATTTGGTTTTCTCCTCATCAACC 57.271 39.130 0.00 0.00 37.92 3.77
2500 4858 9.828691 TCTGAGGGATGAGAGTTCATAATATAA 57.171 33.333 0.00 0.00 44.01 0.98
2501 4859 9.828691 TTCTGAGGGATGAGAGTTCATAATATA 57.171 33.333 0.00 0.00 44.01 0.86
2502 4860 8.733092 TTCTGAGGGATGAGAGTTCATAATAT 57.267 34.615 0.00 0.00 44.01 1.28
2503 4861 8.007153 TCTTCTGAGGGATGAGAGTTCATAATA 58.993 37.037 0.00 0.00 44.01 0.98
2504 4862 6.843333 TCTTCTGAGGGATGAGAGTTCATAAT 59.157 38.462 0.00 0.00 44.01 1.28
2505 4863 6.197903 TCTTCTGAGGGATGAGAGTTCATAA 58.802 40.000 0.00 0.00 44.01 1.90
2506 4864 5.770919 TCTTCTGAGGGATGAGAGTTCATA 58.229 41.667 0.00 0.00 44.01 2.15
2507 4865 4.618635 TCTTCTGAGGGATGAGAGTTCAT 58.381 43.478 0.00 0.00 46.61 2.57
2508 4866 4.053009 TCTTCTGAGGGATGAGAGTTCA 57.947 45.455 0.00 0.00 37.81 3.18
2509 4867 4.648762 TCATCTTCTGAGGGATGAGAGTTC 59.351 45.833 16.11 0.00 41.99 3.01
2510 4868 4.618635 TCATCTTCTGAGGGATGAGAGTT 58.381 43.478 16.11 0.00 41.99 3.01
2511 4869 4.262891 TCATCTTCTGAGGGATGAGAGT 57.737 45.455 16.11 0.00 41.99 3.24
2516 4874 4.056740 CGTCAATCATCTTCTGAGGGATG 58.943 47.826 13.10 13.10 37.28 3.51
2517 4875 3.070734 CCGTCAATCATCTTCTGAGGGAT 59.929 47.826 4.42 0.00 44.30 3.85
2518 4876 2.432146 CCGTCAATCATCTTCTGAGGGA 59.568 50.000 4.42 0.00 44.30 4.20
2519 4877 2.432146 TCCGTCAATCATCTTCTGAGGG 59.568 50.000 4.11 4.11 43.39 4.30
2520 4878 3.131933 ACTCCGTCAATCATCTTCTGAGG 59.868 47.826 0.00 0.00 37.28 3.86
2521 4879 4.383850 ACTCCGTCAATCATCTTCTGAG 57.616 45.455 0.00 0.00 37.28 3.35
2522 4880 4.808414 AACTCCGTCAATCATCTTCTGA 57.192 40.909 0.00 0.00 38.53 3.27
2523 4881 4.806247 GGTAACTCCGTCAATCATCTTCTG 59.194 45.833 0.00 0.00 0.00 3.02
2524 4882 4.466370 TGGTAACTCCGTCAATCATCTTCT 59.534 41.667 0.00 0.00 39.52 2.85
2525 4883 4.567159 GTGGTAACTCCGTCAATCATCTTC 59.433 45.833 0.00 0.00 39.52 2.87
2526 4884 4.020573 TGTGGTAACTCCGTCAATCATCTT 60.021 41.667 0.00 0.00 39.52 2.40
2527 4885 3.513912 TGTGGTAACTCCGTCAATCATCT 59.486 43.478 0.00 0.00 39.52 2.90
2528 4886 3.617263 GTGTGGTAACTCCGTCAATCATC 59.383 47.826 0.00 0.00 39.52 2.92
2529 4887 3.007506 TGTGTGGTAACTCCGTCAATCAT 59.992 43.478 0.00 0.00 39.52 2.45
2530 4888 2.365941 TGTGTGGTAACTCCGTCAATCA 59.634 45.455 0.00 0.00 39.52 2.57
2531 4889 2.735134 GTGTGTGGTAACTCCGTCAATC 59.265 50.000 0.00 0.00 39.52 2.67
2532 4890 2.549349 GGTGTGTGGTAACTCCGTCAAT 60.549 50.000 0.00 0.00 39.52 2.57
2551 4909 0.600057 GTTCCCGTCGACTACAAGGT 59.400 55.000 14.70 0.00 0.00 3.50
2571 4929 2.493675 TGTTCATTCAGTCGGAGGAGAG 59.506 50.000 0.00 0.00 0.00 3.20
2622 4980 3.064207 TCTTGTGTTGGAGTACGCATTC 58.936 45.455 0.00 0.00 38.25 2.67
2655 5013 7.069455 TCTGGTTAGTGACATAGCATAGCTTAA 59.931 37.037 0.00 0.00 40.44 1.85
2656 5014 6.549736 TCTGGTTAGTGACATAGCATAGCTTA 59.450 38.462 0.00 0.00 40.44 3.09
2657 5015 5.363868 TCTGGTTAGTGACATAGCATAGCTT 59.636 40.000 0.00 0.00 40.44 3.74
2658 5016 4.895889 TCTGGTTAGTGACATAGCATAGCT 59.104 41.667 0.00 0.00 43.41 3.32
2659 5017 5.201713 TCTGGTTAGTGACATAGCATAGC 57.798 43.478 0.00 0.00 0.00 2.97
2660 5018 7.436933 TCAATCTGGTTAGTGACATAGCATAG 58.563 38.462 0.00 0.00 0.00 2.23
2661 5019 7.360113 TCAATCTGGTTAGTGACATAGCATA 57.640 36.000 0.00 0.00 0.00 3.14
2662 5020 6.239217 TCAATCTGGTTAGTGACATAGCAT 57.761 37.500 0.00 0.00 0.00 3.79
2663 5021 5.675684 TCAATCTGGTTAGTGACATAGCA 57.324 39.130 0.00 0.00 0.00 3.49
2664 5022 6.520272 AGATCAATCTGGTTAGTGACATAGC 58.480 40.000 0.00 0.00 35.42 2.97
2665 5023 7.950512 AGAGATCAATCTGGTTAGTGACATAG 58.049 38.462 0.00 0.00 37.25 2.23
2666 5024 7.561356 TGAGAGATCAATCTGGTTAGTGACATA 59.439 37.037 0.00 0.00 37.25 2.29
2667 5025 6.382282 TGAGAGATCAATCTGGTTAGTGACAT 59.618 38.462 0.00 0.00 37.25 3.06
2668 5026 5.716703 TGAGAGATCAATCTGGTTAGTGACA 59.283 40.000 0.00 0.00 37.25 3.58
2669 5027 6.214191 TGAGAGATCAATCTGGTTAGTGAC 57.786 41.667 0.00 0.00 37.25 3.67
2670 5028 6.438741 AGTTGAGAGATCAATCTGGTTAGTGA 59.561 38.462 0.00 0.00 37.25 3.41
2671 5029 6.638610 AGTTGAGAGATCAATCTGGTTAGTG 58.361 40.000 0.00 0.00 37.25 2.74
2672 5030 6.865834 AGTTGAGAGATCAATCTGGTTAGT 57.134 37.500 0.00 0.00 37.25 2.24
2673 5031 6.538021 CCAAGTTGAGAGATCAATCTGGTTAG 59.462 42.308 3.87 0.00 37.25 2.34
2674 5032 6.409704 CCAAGTTGAGAGATCAATCTGGTTA 58.590 40.000 3.87 0.00 37.25 2.85
2675 5033 5.251764 CCAAGTTGAGAGATCAATCTGGTT 58.748 41.667 3.87 0.00 37.25 3.67
2676 5034 4.324099 CCCAAGTTGAGAGATCAATCTGGT 60.324 45.833 3.87 0.00 37.25 4.00
2677 5035 4.080695 TCCCAAGTTGAGAGATCAATCTGG 60.081 45.833 3.87 11.50 37.25 3.86
2678 5036 5.095145 TCCCAAGTTGAGAGATCAATCTG 57.905 43.478 3.87 0.00 37.25 2.90
2679 5037 4.782156 ACTCCCAAGTTGAGAGATCAATCT 59.218 41.667 20.08 0.00 33.71 2.40
2680 5038 5.096443 ACTCCCAAGTTGAGAGATCAATC 57.904 43.478 20.08 0.00 33.95 2.67
2681 5039 5.511386 AACTCCCAAGTTGAGAGATCAAT 57.489 39.130 20.08 0.00 44.13 2.57
2682 5040 4.982241 AACTCCCAAGTTGAGAGATCAA 57.018 40.909 20.08 0.00 44.13 2.57
2683 5041 6.433847 TTTAACTCCCAAGTTGAGAGATCA 57.566 37.500 20.08 0.00 45.37 2.92
2684 5042 7.929941 AATTTAACTCCCAAGTTGAGAGATC 57.070 36.000 20.08 0.00 45.37 2.75
2686 5044 9.886132 GTATAATTTAACTCCCAAGTTGAGAGA 57.114 33.333 20.08 5.83 45.37 3.10
2687 5045 8.818057 CGTATAATTTAACTCCCAAGTTGAGAG 58.182 37.037 12.47 12.47 45.37 3.20
2688 5046 8.533657 TCGTATAATTTAACTCCCAAGTTGAGA 58.466 33.333 3.87 0.00 45.37 3.27
2689 5047 8.712285 TCGTATAATTTAACTCCCAAGTTGAG 57.288 34.615 3.87 0.00 45.37 3.02
2690 5048 8.938906 GTTCGTATAATTTAACTCCCAAGTTGA 58.061 33.333 3.87 0.00 45.37 3.18
2691 5049 8.943002 AGTTCGTATAATTTAACTCCCAAGTTG 58.057 33.333 0.00 0.00 45.37 3.16
2693 5051 8.098912 ACAGTTCGTATAATTTAACTCCCAAGT 58.901 33.333 0.00 0.00 37.32 3.16
2694 5052 8.488651 ACAGTTCGTATAATTTAACTCCCAAG 57.511 34.615 0.00 0.00 29.93 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.