Multiple sequence alignment - TraesCS5A01G468700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G468700 chr5A 100.000 5759 0 0 1 5759 645996961 646002719 0.000000e+00 10635
1 TraesCS5A01G468700 chr5A 83.333 516 58 17 2167 2664 666950846 666950341 8.800000e-123 451
2 TraesCS5A01G468700 chr5A 95.763 118 5 0 4267 4384 136985007 136984890 2.120000e-44 191
3 TraesCS5A01G468700 chr5D 94.574 1714 80 8 1793 3503 519423031 519424734 0.000000e+00 2638
4 TraesCS5A01G468700 chr5D 91.447 1368 81 23 456 1808 519421665 519423011 0.000000e+00 1845
5 TraesCS5A01G468700 chr5D 90.261 1263 71 27 4386 5642 519425549 519426765 0.000000e+00 1604
6 TraesCS5A01G468700 chr5D 84.860 786 60 29 3500 4269 519424806 519425548 0.000000e+00 737
7 TraesCS5A01G468700 chr5B 94.056 1716 88 9 1793 3503 653795007 653796713 0.000000e+00 2591
8 TraesCS5A01G468700 chr5B 88.137 1846 131 30 1 1808 653793187 653794982 0.000000e+00 2115
9 TraesCS5A01G468700 chr5B 95.225 1110 40 9 4390 5488 653797523 653798630 0.000000e+00 1744
10 TraesCS5A01G468700 chr5B 91.931 756 44 11 3500 4253 653796782 653797522 0.000000e+00 1042
11 TraesCS5A01G468700 chr5B 94.466 506 24 3 1793 2296 440100447 440100950 0.000000e+00 776
12 TraesCS5A01G468700 chr2B 95.427 503 19 3 1796 2296 272173528 272173028 0.000000e+00 798
13 TraesCS5A01G468700 chr2B 94.280 507 24 4 1793 2296 132705639 132706143 0.000000e+00 771
14 TraesCS5A01G468700 chr2B 94.433 503 23 4 1796 2296 658913012 658912513 0.000000e+00 769
15 TraesCS5A01G468700 chr2B 94.235 503 25 3 1796 2296 63556509 63556009 0.000000e+00 765
16 TraesCS5A01G468700 chr2B 94.262 122 7 0 4263 4384 794534960 794534839 2.740000e-43 187
17 TraesCS5A01G468700 chr4B 95.229 503 20 3 1796 2296 226624981 226624481 0.000000e+00 793
18 TraesCS5A01G468700 chr4B 94.632 503 23 3 1796 2296 102094250 102093750 0.000000e+00 776
19 TraesCS5A01G468700 chr4B 91.089 303 24 2 1508 1808 226625305 226625004 1.930000e-109 407
20 TraesCS5A01G468700 chr7A 80.531 339 47 15 2322 2656 107788697 107788374 5.770000e-60 243
21 TraesCS5A01G468700 chr7A 92.308 130 8 1 4267 4394 721098232 721098361 3.540000e-42 183
22 TraesCS5A01G468700 chr3A 95.763 118 5 0 4267 4384 108378992 108378875 2.120000e-44 191
23 TraesCS5A01G468700 chr2A 94.262 122 7 0 4268 4389 78845689 78845568 2.740000e-43 187
24 TraesCS5A01G468700 chr2A 91.304 138 10 2 4261 4396 606523679 606523816 2.740000e-43 187
25 TraesCS5A01G468700 chr2D 92.913 127 9 0 4258 4384 539879440 539879566 9.850000e-43 185
26 TraesCS5A01G468700 chr2D 87.013 154 17 3 4235 4387 99684449 99684600 2.760000e-38 171
27 TraesCS5A01G468700 chr3B 87.662 154 16 3 4235 4387 732048993 732049144 5.930000e-40 176
28 TraesCS5A01G468700 chr1B 84.810 158 17 5 1215 1372 98745706 98745856 9.990000e-33 152
29 TraesCS5A01G468700 chr1B 91.667 108 9 0 1265 1372 98803749 98803856 3.590000e-32 150


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G468700 chr5A 645996961 646002719 5758 False 10635 10635 100.00000 1 5759 1 chr5A.!!$F1 5758
1 TraesCS5A01G468700 chr5A 666950341 666950846 505 True 451 451 83.33300 2167 2664 1 chr5A.!!$R2 497
2 TraesCS5A01G468700 chr5D 519421665 519426765 5100 False 1706 2638 90.28550 456 5642 4 chr5D.!!$F1 5186
3 TraesCS5A01G468700 chr5B 653793187 653798630 5443 False 1873 2591 92.33725 1 5488 4 chr5B.!!$F2 5487
4 TraesCS5A01G468700 chr5B 440100447 440100950 503 False 776 776 94.46600 1793 2296 1 chr5B.!!$F1 503
5 TraesCS5A01G468700 chr2B 272173028 272173528 500 True 798 798 95.42700 1796 2296 1 chr2B.!!$R2 500
6 TraesCS5A01G468700 chr2B 132705639 132706143 504 False 771 771 94.28000 1793 2296 1 chr2B.!!$F1 503
7 TraesCS5A01G468700 chr2B 63556009 63556509 500 True 765 765 94.23500 1796 2296 1 chr2B.!!$R1 500
8 TraesCS5A01G468700 chr4B 102093750 102094250 500 True 776 776 94.63200 1796 2296 1 chr4B.!!$R1 500
9 TraesCS5A01G468700 chr4B 226624481 226625305 824 True 600 793 93.15900 1508 2296 2 chr4B.!!$R2 788

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
384 396 0.038526 CCGCGAAACTACAGGTGTCT 60.039 55.0 8.23 0.0 30.15 3.41 F
877 905 0.118144 AGCCTTTCCACCTCTCCTCT 59.882 55.0 0.00 0.0 0.00 3.69 F
1451 1490 0.108585 GGAGTGGTGTTCCTCTGCAA 59.891 55.0 0.00 0.0 42.49 4.08 F
1531 1574 0.320073 CATTGGTTGTTGCTGCCTGG 60.320 55.0 0.00 0.0 0.00 4.45 F
3263 3370 1.238439 GCTGCCTCTAACTTGTGCAA 58.762 50.0 0.00 0.0 0.00 4.08 F
3491 3599 0.251297 TGTTTGATCTGCACCCCCTG 60.251 55.0 0.00 0.0 0.00 4.45 F
4387 4592 0.033796 TTCGGACGGAGGGAGTGTAT 60.034 55.0 0.00 0.0 0.00 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1206 1240 0.109532 TTCACCCATCAAAGCGACCA 59.890 50.000 0.0 0.0 0.00 4.02 R
1711 1757 1.265095 CAGCAATCGACCACCATATGC 59.735 52.381 0.0 0.0 0.00 3.14 R
3243 3350 0.950555 TGCACAAGTTAGAGGCAGCG 60.951 55.000 0.0 0.0 0.00 5.18 R
3319 3426 1.102978 ACTGCCGTGAAAGCAAAAGT 58.897 45.000 0.0 0.0 40.35 2.66 R
4368 4573 0.033796 ATACACTCCCTCCGTCCGAA 60.034 55.000 0.0 0.0 0.00 4.30 R
4651 4857 0.106708 TTTAGCATAGCCAGCTCCCG 59.893 55.000 0.0 0.0 42.32 5.14 R
5728 5948 0.098728 ATGCAATGTTTCGCTACGGC 59.901 50.000 0.0 0.0 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 4.759782 CGTGTCATTCTTCCATAGGAACT 58.240 43.478 0.00 0.00 46.37 3.01
128 129 7.887495 ACATATGGTGGCAAAAATAACCAAAAT 59.113 29.630 7.80 0.00 45.40 1.82
180 182 8.893727 AGGTGTGATCTATAAAAATAGCAACAC 58.106 33.333 0.00 12.08 34.46 3.32
185 187 8.892723 TGATCTATAAAAATAGCAACACCACAG 58.107 33.333 0.00 0.00 0.00 3.66
196 198 5.381757 AGCAACACCACAGTTTCCTATAAA 58.618 37.500 0.00 0.00 0.00 1.40
261 263 3.553511 CCAGCAGTGCTTCTATCTTTACG 59.446 47.826 16.89 0.00 36.40 3.18
265 267 4.113354 CAGTGCTTCTATCTTTACGTCCC 58.887 47.826 0.00 0.00 0.00 4.46
271 273 1.000496 CTATCTTTACGTCCCGGGAGC 60.000 57.143 27.72 17.99 0.00 4.70
277 279 1.606885 TACGTCCCGGGAGCGATTTT 61.607 55.000 36.08 23.10 0.00 1.82
278 280 2.461110 CGTCCCGGGAGCGATTTTG 61.461 63.158 30.00 9.73 0.00 2.44
279 281 1.376812 GTCCCGGGAGCGATTTTGT 60.377 57.895 27.72 0.00 0.00 2.83
280 282 0.958876 GTCCCGGGAGCGATTTTGTT 60.959 55.000 27.72 0.00 0.00 2.83
281 283 0.958382 TCCCGGGAGCGATTTTGTTG 60.958 55.000 22.63 0.00 0.00 3.33
282 284 0.958382 CCCGGGAGCGATTTTGTTGA 60.958 55.000 18.48 0.00 0.00 3.18
283 285 0.168128 CCGGGAGCGATTTTGTTGAC 59.832 55.000 0.00 0.00 0.00 3.18
284 286 0.179225 CGGGAGCGATTTTGTTGACG 60.179 55.000 0.00 0.00 0.00 4.35
285 287 0.872388 GGGAGCGATTTTGTTGACGT 59.128 50.000 0.00 0.00 0.00 4.34
287 289 1.263217 GGAGCGATTTTGTTGACGTGT 59.737 47.619 0.00 0.00 0.00 4.49
288 290 2.560896 GAGCGATTTTGTTGACGTGTC 58.439 47.619 0.00 0.00 0.00 3.67
289 291 1.070843 AGCGATTTTGTTGACGTGTCG 60.071 47.619 0.00 0.00 0.00 4.35
295 307 4.440851 TTTTGTTGACGTGTCGTGATAC 57.559 40.909 0.00 0.00 41.37 2.24
311 323 2.094390 TGATACACGTGGAAGTGGCTAC 60.094 50.000 21.57 0.00 45.80 3.58
324 336 2.580601 GGCTACACCACCCAGACGT 61.581 63.158 0.00 0.00 38.86 4.34
329 341 2.841044 ACCACCCAGACGTTCCGT 60.841 61.111 0.00 0.00 45.10 4.69
334 346 1.246737 ACCCAGACGTTCCGTAGACC 61.247 60.000 0.00 0.00 41.37 3.85
338 350 2.288640 CCAGACGTTCCGTAGACCTTTT 60.289 50.000 0.00 0.00 41.37 2.27
359 371 8.466086 CTTTTAAAGGAGAAAATGATTTCCGG 57.534 34.615 0.00 0.00 44.96 5.14
384 396 0.038526 CCGCGAAACTACAGGTGTCT 60.039 55.000 8.23 0.00 30.15 3.41
393 405 7.442657 CGAAACTACAGGTGTCTATTAAAACG 58.557 38.462 0.00 0.00 30.15 3.60
397 409 3.676646 ACAGGTGTCTATTAAAACGACGC 59.323 43.478 0.00 6.99 37.43 5.19
398 410 3.646491 GGTGTCTATTAAAACGACGCC 57.354 47.619 14.78 14.78 46.93 5.68
422 434 8.545420 GCCGTTGATTTAGAATATAACGAAGAA 58.455 33.333 17.04 0.00 42.23 2.52
438 451 5.374071 ACGAAGAACCTTTTTCAGTGGTAT 58.626 37.500 0.00 0.00 33.17 2.73
443 456 7.158099 AGAACCTTTTTCAGTGGTATTATGC 57.842 36.000 0.00 0.00 33.17 3.14
496 509 3.533919 GCACGACGAAAACAAATTACGA 58.466 40.909 0.00 0.00 0.00 3.43
501 514 5.451982 ACGACGAAAACAAATTACGAAAACC 59.548 36.000 0.00 0.00 0.00 3.27
502 515 5.384215 CGACGAAAACAAATTACGAAAACCG 60.384 40.000 0.00 0.00 45.44 4.44
503 516 4.204775 ACGAAAACAAATTACGAAAACCGC 59.795 37.500 0.00 0.00 43.32 5.68
504 517 4.656262 CGAAAACAAATTACGAAAACCGCG 60.656 41.667 0.00 0.00 43.32 6.46
506 519 0.979098 CAAATTACGAAAACCGCGGC 59.021 50.000 28.58 7.92 43.32 6.53
507 520 0.592148 AAATTACGAAAACCGCGGCA 59.408 45.000 28.58 0.00 43.32 5.69
524 538 4.254709 AACAGCTGCACCGCCTGA 62.255 61.111 15.27 0.00 0.00 3.86
534 548 3.788766 CCGCCTGAACCTTTCGCG 61.789 66.667 0.00 0.00 38.61 5.87
552 567 3.250521 TCGCGGAAAGAATAAAACGGTTT 59.749 39.130 6.13 2.90 0.00 3.27
560 575 9.465985 GGAAAGAATAAAACGGTTTCACATAAA 57.534 29.630 0.00 0.00 0.00 1.40
580 595 4.718940 AACCAGAGAAAACTTGGTGTTG 57.281 40.909 0.00 0.00 39.13 3.33
588 603 3.441496 AAACTTGGTGTTGTCATGCAG 57.559 42.857 0.00 0.00 39.13 4.41
645 665 7.996098 AAATCGAAAAGACCTATTTTCCTCA 57.004 32.000 6.40 0.00 43.27 3.86
658 678 7.678171 ACCTATTTTCCTCACCCATTTTATTGT 59.322 33.333 0.00 0.00 0.00 2.71
665 685 5.336690 CCTCACCCATTTTATTGTTGTGAGG 60.337 44.000 18.16 18.16 46.65 3.86
733 759 3.124921 CGTTGCAACCTAGCGGGG 61.125 66.667 23.42 3.25 40.03 5.73
877 905 0.118144 AGCCTTTCCACCTCTCCTCT 59.882 55.000 0.00 0.00 0.00 3.69
878 906 0.539518 GCCTTTCCACCTCTCCTCTC 59.460 60.000 0.00 0.00 0.00 3.20
879 907 1.199615 CCTTTCCACCTCTCCTCTCC 58.800 60.000 0.00 0.00 0.00 3.71
880 908 1.273552 CCTTTCCACCTCTCCTCTCCT 60.274 57.143 0.00 0.00 0.00 3.69
881 909 2.107366 CTTTCCACCTCTCCTCTCCTC 58.893 57.143 0.00 0.00 0.00 3.71
882 910 1.388174 TTCCACCTCTCCTCTCCTCT 58.612 55.000 0.00 0.00 0.00 3.69
883 911 0.923358 TCCACCTCTCCTCTCCTCTC 59.077 60.000 0.00 0.00 0.00 3.20
1096 1128 2.520982 ATAGGTAGAGGCGGCGCA 60.521 61.111 34.36 10.38 0.00 6.09
1097 1129 2.750715 GATAGGTAGAGGCGGCGCAC 62.751 65.000 34.36 25.21 0.00 5.34
1182 1214 8.927315 TTTATTTATTATTATCGTGCGCTGTG 57.073 30.769 9.73 0.00 0.00 3.66
1206 1240 6.170506 GTTTTCTTTTCTTCCTGTTGGGTTT 58.829 36.000 0.00 0.00 36.25 3.27
1210 1244 2.358322 TCTTCCTGTTGGGTTTGGTC 57.642 50.000 0.00 0.00 36.25 4.02
1211 1245 0.951558 CTTCCTGTTGGGTTTGGTCG 59.048 55.000 0.00 0.00 36.25 4.79
1212 1246 1.104577 TTCCTGTTGGGTTTGGTCGC 61.105 55.000 0.00 0.00 36.25 5.19
1213 1247 1.528309 CCTGTTGGGTTTGGTCGCT 60.528 57.895 0.00 0.00 0.00 4.93
1218 1252 1.339929 GTTGGGTTTGGTCGCTTTGAT 59.660 47.619 0.00 0.00 0.00 2.57
1221 1255 0.243636 GGTTTGGTCGCTTTGATGGG 59.756 55.000 0.00 0.00 0.00 4.00
1229 1267 1.004161 TCGCTTTGATGGGTGAATGGA 59.996 47.619 0.00 0.00 0.00 3.41
1392 1431 5.074515 TCCTGATCTCCCCTTTTTACTGTTT 59.925 40.000 0.00 0.00 0.00 2.83
1394 1433 6.294731 CCTGATCTCCCCTTTTTACTGTTTTG 60.295 42.308 0.00 0.00 0.00 2.44
1451 1490 0.108585 GGAGTGGTGTTCCTCTGCAA 59.891 55.000 0.00 0.00 42.49 4.08
1461 1500 2.945668 GTTCCTCTGCAACCATGGATAC 59.054 50.000 21.47 0.93 0.00 2.24
1490 1533 1.825622 GGCTGCAGGGCTTGGATAC 60.826 63.158 17.12 0.00 37.53 2.24
1491 1534 1.225704 GCTGCAGGGCTTGGATACT 59.774 57.895 17.12 0.00 37.61 2.12
1516 1559 5.278660 GCCCACTTTAGATTAGATGGCATTG 60.279 44.000 0.00 0.00 34.90 2.82
1528 1571 1.668793 GGCATTGGTTGTTGCTGCC 60.669 57.895 0.00 0.00 44.91 4.85
1531 1574 0.320073 CATTGGTTGTTGCTGCCTGG 60.320 55.000 0.00 0.00 0.00 4.45
1571 1615 2.174363 TCACTGCTTGGATGACACTG 57.826 50.000 0.00 0.00 0.00 3.66
1573 1617 2.158769 TCACTGCTTGGATGACACTGTT 60.159 45.455 0.00 0.00 0.00 3.16
1576 1620 3.316308 ACTGCTTGGATGACACTGTTTTC 59.684 43.478 0.00 0.00 0.00 2.29
1577 1621 3.286353 TGCTTGGATGACACTGTTTTCA 58.714 40.909 0.00 0.00 0.00 2.69
1582 1628 6.922957 GCTTGGATGACACTGTTTTCATTTTA 59.077 34.615 3.77 0.00 32.43 1.52
1618 1664 1.879737 TTCATTCGTCGGGGCGAGAA 61.880 55.000 0.00 0.00 42.10 2.87
1711 1757 6.760770 GGTAGATCAATCTTCTTCTTGACTGG 59.239 42.308 0.00 0.00 38.32 4.00
1765 1811 6.291377 TGTCTGGTATCTTAGCAAATCATCC 58.709 40.000 0.00 0.00 35.53 3.51
1768 1814 5.376625 TGGTATCTTAGCAAATCATCCCAC 58.623 41.667 0.00 0.00 32.53 4.61
1794 1880 5.282055 TGGTGAGAACCATATGTCTGATC 57.718 43.478 1.24 0.00 34.33 2.92
1816 1902 6.786967 TCTAGGGTTCATCTTAACTGTACC 57.213 41.667 0.00 0.00 34.37 3.34
1886 1973 7.684670 ACAACACTAAATGCTGTATATGAACG 58.315 34.615 0.00 0.00 35.81 3.95
1890 1977 5.690409 ACTAAATGCTGTATATGAACGTCGG 59.310 40.000 0.00 0.00 0.00 4.79
1955 2044 4.052159 AGAGTTGTTGAGATATCCTGCG 57.948 45.455 0.00 0.00 0.00 5.18
1972 2061 1.805254 CGGCCTTGCTCATTTCCAG 59.195 57.895 0.00 0.00 0.00 3.86
2088 2179 2.826128 TCTATAGGGCATGCTTAGACCG 59.174 50.000 18.92 1.50 39.93 4.79
2094 2185 1.281899 GCATGCTTAGACCGTCTGAC 58.718 55.000 11.37 0.00 0.00 3.51
2234 2327 7.989741 TGTTTAAATGGTGGTGTTTGATCAAAT 59.010 29.630 23.05 6.51 32.36 2.32
2423 2530 9.295214 CCTACTGTGAATGATCATACGAATATC 57.705 37.037 9.04 1.41 38.01 1.63
2470 2577 5.726980 TGCTTTTTGATATCTGCCTTTGT 57.273 34.783 3.98 0.00 0.00 2.83
2516 2623 5.984233 TGATTATATCGTGTCTTGGTTGC 57.016 39.130 0.00 0.00 0.00 4.17
2551 2658 7.606456 ACCTAACATCGATGTACAAAATTCTGT 59.394 33.333 30.16 13.06 40.80 3.41
2554 2661 8.506140 AACATCGATGTACAAAATTCTGTTTG 57.494 30.769 30.16 0.00 40.80 2.93
2740 2847 3.094572 CAATCTCTCTGGCAATGGGTTT 58.905 45.455 0.00 0.00 0.00 3.27
2838 2945 8.682936 AATATGTTTCCAATCCAGTAGATCAC 57.317 34.615 0.00 0.00 32.47 3.06
2849 2956 2.797156 CAGTAGATCACGCTATTGCACC 59.203 50.000 0.00 0.00 39.64 5.01
2861 2968 4.449068 CGCTATTGCACCTTTATACTCCAG 59.551 45.833 0.00 0.00 39.64 3.86
2862 2969 5.611374 GCTATTGCACCTTTATACTCCAGA 58.389 41.667 0.00 0.00 39.41 3.86
2864 2971 6.203723 GCTATTGCACCTTTATACTCCAGAAG 59.796 42.308 0.00 0.00 39.41 2.85
2872 2979 5.992217 CCTTTATACTCCAGAAGGTACATGC 59.008 44.000 0.00 0.00 35.13 4.06
2873 2980 6.183361 CCTTTATACTCCAGAAGGTACATGCT 60.183 42.308 0.00 0.00 35.13 3.79
2883 2990 3.769739 AGGTACATGCTTTCACTGTGA 57.230 42.857 6.36 6.36 0.00 3.58
2888 2995 3.813443 ACATGCTTTCACTGTGAGAGTT 58.187 40.909 23.99 12.90 31.85 3.01
2923 3030 4.682778 TCTATAAAATGGACCCTGTCGG 57.317 45.455 0.00 0.00 32.65 4.79
2939 3046 7.290061 ACCCTGTCGGTACATAAGTTATAGTA 58.710 38.462 0.00 0.00 45.97 1.82
2955 3062 8.107399 AGTTATAGTAAACTTTTTGGGTCTGC 57.893 34.615 0.00 0.00 36.26 4.26
2956 3063 7.722285 AGTTATAGTAAACTTTTTGGGTCTGCA 59.278 33.333 0.00 0.00 36.26 4.41
2973 3080 9.217336 TGGGTCTGCAATATGATACTATGATAT 57.783 33.333 0.00 0.00 0.00 1.63
3098 3205 4.268644 CGATACTGATGAATCGTTTGTGCT 59.731 41.667 0.00 0.00 40.01 4.40
3109 3216 2.606725 TCGTTTGTGCTTTGCCATTTTG 59.393 40.909 0.00 0.00 0.00 2.44
3118 3225 5.695816 GTGCTTTGCCATTTTGAACTATTCA 59.304 36.000 0.00 0.00 38.04 2.57
3243 3350 5.749109 CCAGTTGATTCTTATCCGAGTGTAC 59.251 44.000 0.00 0.00 0.00 2.90
3263 3370 1.238439 GCTGCCTCTAACTTGTGCAA 58.762 50.000 0.00 0.00 0.00 4.08
3269 3376 6.588719 TGCCTCTAACTTGTGCAATTTTAT 57.411 33.333 0.00 0.00 0.00 1.40
3280 3387 9.593134 ACTTGTGCAATTTTATTTTTACACAGA 57.407 25.926 0.00 0.00 37.98 3.41
3300 3407 8.537016 ACACAGAATGATGATTGATCCATTTTT 58.463 29.630 0.00 0.00 39.69 1.94
3332 3440 8.519492 TTTGCTGATATAACTTTTGCTTTCAC 57.481 30.769 0.00 0.00 0.00 3.18
3334 3442 5.739161 GCTGATATAACTTTTGCTTTCACGG 59.261 40.000 0.00 0.00 0.00 4.94
3373 3481 3.752747 GACGTATTCTAGGACCTAGAGGC 59.247 52.174 26.52 16.30 42.92 4.70
3412 3520 1.661112 GAAGCATCTACTGGTTGTCGC 59.339 52.381 0.00 0.00 45.33 5.19
3467 3575 3.154710 CCAGGGAAGGTAACCAAAGTTC 58.845 50.000 0.00 0.00 37.42 3.01
3491 3599 0.251297 TGTTTGATCTGCACCCCCTG 60.251 55.000 0.00 0.00 0.00 4.45
3497 3605 1.559682 GATCTGCACCCCCTGAAGTTA 59.440 52.381 0.00 0.00 0.00 2.24
3500 3608 2.378547 TCTGCACCCCCTGAAGTTAAAT 59.621 45.455 0.00 0.00 0.00 1.40
3502 3610 4.043561 TCTGCACCCCCTGAAGTTAAATTA 59.956 41.667 0.00 0.00 0.00 1.40
3503 3611 4.941713 TGCACCCCCTGAAGTTAAATTAT 58.058 39.130 0.00 0.00 0.00 1.28
3504 3612 6.069323 TCTGCACCCCCTGAAGTTAAATTATA 60.069 38.462 0.00 0.00 0.00 0.98
3505 3613 5.889289 TGCACCCCCTGAAGTTAAATTATAC 59.111 40.000 0.00 0.00 0.00 1.47
3507 3615 6.549736 GCACCCCCTGAAGTTAAATTATACAT 59.450 38.462 0.00 0.00 0.00 2.29
3580 3763 4.451629 TGGAATCGTCTTCCAGTTCTAC 57.548 45.455 15.26 0.00 43.17 2.59
3618 3812 3.432046 CCATGTTTGGCTTTTCACAACCT 60.432 43.478 0.00 0.00 35.85 3.50
3619 3813 3.244033 TGTTTGGCTTTTCACAACCTG 57.756 42.857 0.00 0.00 0.00 4.00
3620 3814 2.564947 TGTTTGGCTTTTCACAACCTGT 59.435 40.909 0.00 0.00 0.00 4.00
3621 3815 3.007398 TGTTTGGCTTTTCACAACCTGTT 59.993 39.130 0.00 0.00 0.00 3.16
3625 3819 4.211125 TGGCTTTTCACAACCTGTTCATA 58.789 39.130 0.00 0.00 0.00 2.15
3626 3820 4.646945 TGGCTTTTCACAACCTGTTCATAA 59.353 37.500 0.00 0.00 0.00 1.90
3627 3821 4.982295 GGCTTTTCACAACCTGTTCATAAC 59.018 41.667 0.00 0.00 0.00 1.89
3628 3822 4.982295 GCTTTTCACAACCTGTTCATAACC 59.018 41.667 0.00 0.00 0.00 2.85
3629 3823 5.523438 TTTTCACAACCTGTTCATAACCC 57.477 39.130 0.00 0.00 0.00 4.11
3630 3824 3.149005 TCACAACCTGTTCATAACCCC 57.851 47.619 0.00 0.00 0.00 4.95
3631 3825 2.443632 TCACAACCTGTTCATAACCCCA 59.556 45.455 0.00 0.00 0.00 4.96
3632 3826 3.075283 TCACAACCTGTTCATAACCCCAT 59.925 43.478 0.00 0.00 0.00 4.00
3633 3827 3.831911 CACAACCTGTTCATAACCCCATT 59.168 43.478 0.00 0.00 0.00 3.16
3634 3828 3.831911 ACAACCTGTTCATAACCCCATTG 59.168 43.478 0.00 0.00 0.00 2.82
3635 3829 3.100207 ACCTGTTCATAACCCCATTGG 57.900 47.619 0.00 0.00 41.37 3.16
3636 3830 2.652348 ACCTGTTCATAACCCCATTGGA 59.348 45.455 3.62 0.00 38.00 3.53
3637 3831 3.272020 ACCTGTTCATAACCCCATTGGAT 59.728 43.478 3.62 0.00 38.00 3.41
3676 3870 0.691413 CTCCTGGAACTCCCTACCCC 60.691 65.000 0.00 0.00 35.38 4.95
3680 3874 1.560146 CTGGAACTCCCTACCCCTTTC 59.440 57.143 0.00 0.00 35.38 2.62
3685 3879 2.843081 ACTCCCTACCCCTTTCCTAAC 58.157 52.381 0.00 0.00 0.00 2.34
3753 3947 1.407434 TACTTTTACACCGACGTGCG 58.593 50.000 0.00 0.00 44.40 5.34
3797 3991 9.849166 CCAGTTTACTTGTCAACTTTCTTTTTA 57.151 29.630 0.00 0.00 30.48 1.52
3804 3998 8.129211 ACTTGTCAACTTTCTTTTTATTCCTCG 58.871 33.333 0.00 0.00 0.00 4.63
3824 4018 6.017440 TCCTCGTAAATCTGTTTTCCTGTTTG 60.017 38.462 0.00 0.00 0.00 2.93
3827 4021 4.751767 AAATCTGTTTTCCTGTTTGGCA 57.248 36.364 0.00 0.00 35.26 4.92
3832 4026 5.495640 TCTGTTTTCCTGTTTGGCAATTTT 58.504 33.333 0.00 0.00 35.26 1.82
3834 4028 5.947443 TGTTTTCCTGTTTGGCAATTTTTG 58.053 33.333 0.00 0.00 35.26 2.44
3855 4049 1.474077 CCTGTAGGTTCCATTGCTTGC 59.526 52.381 0.00 0.00 0.00 4.01
3860 4054 3.843893 AGGTTCCATTGCTTGCTTTTT 57.156 38.095 0.00 0.00 0.00 1.94
3882 4077 2.703536 TGCCTCTCACCTTGTGTTTCTA 59.296 45.455 0.00 0.00 34.79 2.10
3893 4088 4.084537 CCTTGTGTTTCTACTACGTTGCTG 60.085 45.833 0.00 0.00 0.00 4.41
3907 4102 5.405331 ACGTTGCTGAGAACTTAAGTTTC 57.595 39.130 21.40 18.66 38.56 2.78
3910 4105 5.006746 CGTTGCTGAGAACTTAAGTTTCACT 59.993 40.000 21.40 14.03 38.56 3.41
3945 4141 2.847327 TCTTCAAGGAGGACAAGCTG 57.153 50.000 0.00 0.00 0.00 4.24
4084 4280 3.581332 ACTGCTAAAGCCAGTGGTAAGTA 59.419 43.478 11.74 2.32 41.18 2.24
4117 4320 5.912892 TCCATGTACATATTCGCTTTCTGA 58.087 37.500 8.32 0.00 0.00 3.27
4269 4474 2.108168 TGGTCACCACCTAGCAGATAC 58.892 52.381 0.00 0.00 44.17 2.24
4270 4475 2.292257 TGGTCACCACCTAGCAGATACT 60.292 50.000 0.00 0.00 44.17 2.12
4271 4476 2.362717 GGTCACCACCTAGCAGATACTC 59.637 54.545 0.00 0.00 40.00 2.59
4273 4478 1.689273 CACCACCTAGCAGATACTCCC 59.311 57.143 0.00 0.00 0.00 4.30
4274 4479 1.576272 ACCACCTAGCAGATACTCCCT 59.424 52.381 0.00 0.00 0.00 4.20
4275 4480 2.243810 CCACCTAGCAGATACTCCCTC 58.756 57.143 0.00 0.00 0.00 4.30
4276 4481 2.243810 CACCTAGCAGATACTCCCTCC 58.756 57.143 0.00 0.00 0.00 4.30
4277 4482 1.202952 ACCTAGCAGATACTCCCTCCG 60.203 57.143 0.00 0.00 0.00 4.63
4278 4483 1.202952 CCTAGCAGATACTCCCTCCGT 60.203 57.143 0.00 0.00 0.00 4.69
4279 4484 2.156098 CTAGCAGATACTCCCTCCGTC 58.844 57.143 0.00 0.00 0.00 4.79
4280 4485 0.468400 AGCAGATACTCCCTCCGTCC 60.468 60.000 0.00 0.00 0.00 4.79
4281 4486 0.755698 GCAGATACTCCCTCCGTCCA 60.756 60.000 0.00 0.00 0.00 4.02
4282 4487 1.776662 CAGATACTCCCTCCGTCCAA 58.223 55.000 0.00 0.00 0.00 3.53
4283 4488 2.108168 CAGATACTCCCTCCGTCCAAA 58.892 52.381 0.00 0.00 0.00 3.28
4284 4489 2.500098 CAGATACTCCCTCCGTCCAAAA 59.500 50.000 0.00 0.00 0.00 2.44
4285 4490 3.055385 CAGATACTCCCTCCGTCCAAAAA 60.055 47.826 0.00 0.00 0.00 1.94
4308 4513 7.631717 AAAACTTGTCCCAAGCTTATATCTC 57.368 36.000 0.00 0.00 0.00 2.75
4309 4514 5.957771 ACTTGTCCCAAGCTTATATCTCA 57.042 39.130 0.00 0.00 0.00 3.27
4310 4515 6.313519 ACTTGTCCCAAGCTTATATCTCAA 57.686 37.500 0.00 0.18 0.00 3.02
4311 4516 6.721318 ACTTGTCCCAAGCTTATATCTCAAA 58.279 36.000 0.00 0.00 0.00 2.69
4312 4517 7.349598 ACTTGTCCCAAGCTTATATCTCAAAT 58.650 34.615 0.00 0.00 0.00 2.32
4313 4518 7.284034 ACTTGTCCCAAGCTTATATCTCAAATG 59.716 37.037 0.00 0.00 0.00 2.32
4314 4519 6.064060 TGTCCCAAGCTTATATCTCAAATGG 58.936 40.000 0.00 0.00 0.00 3.16
4315 4520 6.126507 TGTCCCAAGCTTATATCTCAAATGGA 60.127 38.462 0.00 0.00 0.00 3.41
4316 4521 6.944862 GTCCCAAGCTTATATCTCAAATGGAT 59.055 38.462 0.00 0.00 0.00 3.41
4317 4522 6.944290 TCCCAAGCTTATATCTCAAATGGATG 59.056 38.462 0.00 0.00 0.00 3.51
4318 4523 6.718454 CCCAAGCTTATATCTCAAATGGATGT 59.282 38.462 0.00 0.00 0.00 3.06
4319 4524 7.884877 CCCAAGCTTATATCTCAAATGGATGTA 59.115 37.037 0.00 0.00 0.00 2.29
4320 4525 9.458727 CCAAGCTTATATCTCAAATGGATGTAT 57.541 33.333 0.00 0.00 0.00 2.29
4328 4533 6.737720 TCTCAAATGGATGTATCTAGCACT 57.262 37.500 0.00 0.00 0.00 4.40
4329 4534 7.839680 TCTCAAATGGATGTATCTAGCACTA 57.160 36.000 0.00 0.00 0.00 2.74
4330 4535 8.250143 TCTCAAATGGATGTATCTAGCACTAA 57.750 34.615 0.00 0.00 0.00 2.24
4331 4536 8.144478 TCTCAAATGGATGTATCTAGCACTAAC 58.856 37.037 0.00 0.00 0.00 2.34
4332 4537 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
4333 4538 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
4334 4539 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
4335 4540 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
4336 4541 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
4337 4542 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
4349 4554 7.470289 CACTAACTTGGTGCTAGATACATTC 57.530 40.000 0.00 0.00 0.00 2.67
4350 4555 7.041721 CACTAACTTGGTGCTAGATACATTCA 58.958 38.462 0.00 0.00 0.00 2.57
4351 4556 7.712639 CACTAACTTGGTGCTAGATACATTCAT 59.287 37.037 0.00 0.00 0.00 2.57
4352 4557 8.267894 ACTAACTTGGTGCTAGATACATTCATT 58.732 33.333 0.00 0.00 0.00 2.57
4353 4558 7.944729 AACTTGGTGCTAGATACATTCATTT 57.055 32.000 0.00 0.00 0.00 2.32
4354 4559 7.325660 ACTTGGTGCTAGATACATTCATTTG 57.674 36.000 0.00 0.00 0.00 2.32
4355 4560 7.112122 ACTTGGTGCTAGATACATTCATTTGA 58.888 34.615 0.00 0.00 0.00 2.69
4356 4561 7.281774 ACTTGGTGCTAGATACATTCATTTGAG 59.718 37.037 0.00 0.00 0.00 3.02
4357 4562 6.057533 TGGTGCTAGATACATTCATTTGAGG 58.942 40.000 0.00 0.00 0.00 3.86
4358 4563 5.471456 GGTGCTAGATACATTCATTTGAGGG 59.529 44.000 0.00 0.00 0.00 4.30
4359 4564 6.291377 GTGCTAGATACATTCATTTGAGGGA 58.709 40.000 0.00 0.00 0.00 4.20
4360 4565 6.203723 GTGCTAGATACATTCATTTGAGGGAC 59.796 42.308 0.00 0.00 0.00 4.46
4361 4566 6.126796 TGCTAGATACATTCATTTGAGGGACA 60.127 38.462 0.00 0.00 0.00 4.02
4362 4567 6.767902 GCTAGATACATTCATTTGAGGGACAA 59.232 38.462 0.00 0.00 36.65 3.18
4363 4568 7.041508 GCTAGATACATTCATTTGAGGGACAAG 60.042 40.741 0.00 0.00 39.77 3.16
4364 4569 5.591877 AGATACATTCATTTGAGGGACAAGC 59.408 40.000 0.00 0.00 39.77 4.01
4365 4570 3.771216 ACATTCATTTGAGGGACAAGCT 58.229 40.909 0.00 0.00 39.77 3.74
4366 4571 4.154942 ACATTCATTTGAGGGACAAGCTT 58.845 39.130 0.00 0.00 39.77 3.74
4367 4572 4.590222 ACATTCATTTGAGGGACAAGCTTT 59.410 37.500 0.00 0.00 39.77 3.51
4368 4573 5.070847 ACATTCATTTGAGGGACAAGCTTTT 59.929 36.000 0.00 0.00 39.77 2.27
4369 4574 5.612725 TTCATTTGAGGGACAAGCTTTTT 57.387 34.783 0.00 0.00 39.77 1.94
4370 4575 5.200368 TCATTTGAGGGACAAGCTTTTTC 57.800 39.130 0.00 0.00 39.77 2.29
4371 4576 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
4372 4577 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
4373 4578 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
4374 4579 1.535896 GAGGGACAAGCTTTTTCGGAC 59.464 52.381 0.00 0.00 0.00 4.79
4375 4580 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
4376 4581 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
4377 4582 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
4378 4583 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
4379 4584 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
4380 4585 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
4381 4586 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
4382 4587 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
4383 4588 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
4384 4589 0.034337 TTTTTCGGACGGAGGGAGTG 59.966 55.000 0.00 0.00 0.00 3.51
4385 4590 1.117142 TTTTCGGACGGAGGGAGTGT 61.117 55.000 0.00 0.00 0.00 3.55
4386 4591 0.251297 TTTCGGACGGAGGGAGTGTA 60.251 55.000 0.00 0.00 0.00 2.90
4387 4592 0.033796 TTCGGACGGAGGGAGTGTAT 60.034 55.000 0.00 0.00 0.00 2.29
4388 4593 0.465097 TCGGACGGAGGGAGTGTATC 60.465 60.000 0.00 0.00 0.00 2.24
4545 4750 1.670967 GGCTTGCTTGTCCAAGAATGC 60.671 52.381 14.51 14.51 43.79 3.56
4651 4857 1.276421 TCTACAAGAGGCAACAGCTCC 59.724 52.381 0.00 0.00 41.41 4.70
5073 5281 3.324846 TGGTGCTATGATGGTAGGTGATC 59.675 47.826 0.00 0.00 0.00 2.92
5206 5415 9.661563 ATTATGGAGTCGCGGATAATAATAAAA 57.338 29.630 6.13 0.00 0.00 1.52
5362 5576 9.985730 ATATTGTTGAACTGTGATGAATTTGTT 57.014 25.926 0.00 0.00 0.00 2.83
5366 5580 5.283294 TGAACTGTGATGAATTTGTTGCAG 58.717 37.500 0.00 0.00 0.00 4.41
5377 5591 3.971245 TTTGTTGCAGTTTTGGGTTCT 57.029 38.095 0.00 0.00 0.00 3.01
5428 5642 2.092753 ACAGATGGGATGTTACTGCTGG 60.093 50.000 0.00 0.00 32.67 4.85
5431 5645 1.367346 TGGGATGTTACTGCTGGGAA 58.633 50.000 0.00 0.00 0.00 3.97
5434 5648 2.576615 GGATGTTACTGCTGGGAATCC 58.423 52.381 0.00 0.00 0.00 3.01
5453 5673 3.723348 GTGGGAGACGTTTGCCGC 61.723 66.667 14.23 14.23 41.42 6.53
5460 5680 0.108709 AGACGTTTGCCGCGGTAATA 60.109 50.000 29.30 16.78 41.42 0.98
5488 5708 9.173021 TGTATTATTGTTGTTTGGAGGATACAG 57.827 33.333 0.00 0.00 41.41 2.74
5493 5713 2.265367 TGTTTGGAGGATACAGAGGCA 58.735 47.619 0.00 0.00 41.41 4.75
5494 5714 2.846206 TGTTTGGAGGATACAGAGGCAT 59.154 45.455 0.00 0.00 41.41 4.40
5495 5715 4.037222 TGTTTGGAGGATACAGAGGCATA 58.963 43.478 0.00 0.00 41.41 3.14
5496 5716 4.660303 TGTTTGGAGGATACAGAGGCATAT 59.340 41.667 0.00 0.00 41.41 1.78
5497 5717 4.897509 TTGGAGGATACAGAGGCATATG 57.102 45.455 0.00 0.00 41.41 1.78
5498 5718 2.568956 TGGAGGATACAGAGGCATATGC 59.431 50.000 19.79 19.79 41.41 3.14
5499 5719 2.568956 GGAGGATACAGAGGCATATGCA 59.431 50.000 28.07 7.82 41.13 3.96
5500 5720 3.199508 GGAGGATACAGAGGCATATGCAT 59.800 47.826 28.07 22.70 41.13 3.96
5501 5721 4.190001 GAGGATACAGAGGCATATGCATG 58.810 47.826 28.07 23.13 41.13 4.06
5502 5722 3.586174 AGGATACAGAGGCATATGCATGT 59.414 43.478 28.07 26.74 41.13 3.21
5506 5726 1.607148 CAGAGGCATATGCATGTGTGG 59.393 52.381 26.10 6.18 40.52 4.17
5511 5731 2.296792 GCATATGCATGTGTGGGTGTA 58.703 47.619 22.84 0.00 41.59 2.90
5513 5733 3.058016 GCATATGCATGTGTGGGTGTATC 60.058 47.826 22.84 1.37 41.59 2.24
5525 5745 2.041891 TGGGTGTATCCGGTGGAAAAAT 59.958 45.455 0.00 0.00 34.34 1.82
5536 5756 4.217550 CCGGTGGAAAAATCAGCTTAAGAA 59.782 41.667 6.67 0.00 0.00 2.52
5539 5759 6.515035 CGGTGGAAAAATCAGCTTAAGAAGTT 60.515 38.462 6.67 0.00 0.00 2.66
5541 5761 8.357402 GGTGGAAAAATCAGCTTAAGAAGTTTA 58.643 33.333 6.67 0.00 0.00 2.01
5556 5776 7.839680 AAGAAGTTTATCAAACATTGGACCT 57.160 32.000 4.73 0.00 43.79 3.85
5559 5779 9.362151 AGAAGTTTATCAAACATTGGACCTAAA 57.638 29.630 4.73 0.00 43.79 1.85
5561 5781 8.122472 AGTTTATCAAACATTGGACCTAAAGG 57.878 34.615 4.73 0.00 43.79 3.11
5569 5789 5.953571 ACATTGGACCTAAAGGAAGAAAGT 58.046 37.500 2.23 0.00 38.94 2.66
5575 5795 5.411977 GGACCTAAAGGAAGAAAGTTGTAGC 59.588 44.000 2.23 0.00 38.94 3.58
5583 5803 0.863144 GAAAGTTGTAGCCGCGTTCA 59.137 50.000 4.92 0.00 0.00 3.18
5588 5808 2.671396 AGTTGTAGCCGCGTTCAAATAG 59.329 45.455 4.92 0.00 0.00 1.73
5593 5813 4.921515 TGTAGCCGCGTTCAAATAGATATC 59.078 41.667 4.92 0.00 0.00 1.63
5596 5816 3.741344 GCCGCGTTCAAATAGATATCAGT 59.259 43.478 4.92 0.00 0.00 3.41
5615 5835 7.856145 ATCAGTTTGATAGATTGTTCAGTCC 57.144 36.000 0.00 0.00 34.88 3.85
5640 5860 9.838339 CCCTTAGACTTATATCAACAGATTTGT 57.162 33.333 0.00 0.00 39.87 2.83
5652 5872 7.733773 TCAACAGATTTGTTCTATCCCTAGA 57.266 36.000 0.00 0.00 45.53 2.43
5653 5873 7.556844 TCAACAGATTTGTTCTATCCCTAGAC 58.443 38.462 0.00 0.00 45.53 2.59
5654 5874 7.400339 TCAACAGATTTGTTCTATCCCTAGACT 59.600 37.037 0.00 0.00 45.53 3.24
5655 5875 8.696374 CAACAGATTTGTTCTATCCCTAGACTA 58.304 37.037 0.00 0.00 45.53 2.59
5656 5876 8.840200 ACAGATTTGTTCTATCCCTAGACTAA 57.160 34.615 0.00 0.00 33.66 2.24
5657 5877 8.697292 ACAGATTTGTTCTATCCCTAGACTAAC 58.303 37.037 0.00 0.00 33.66 2.34
5664 5884 8.004801 TGTTCTATCCCTAGACTAACATCATGA 58.995 37.037 0.00 0.00 33.66 3.07
5675 5895 8.430801 AGACTAACATCATGAGATTTGTTAGC 57.569 34.615 29.78 24.52 40.69 3.09
5676 5896 7.497249 AGACTAACATCATGAGATTTGTTAGCC 59.503 37.037 29.78 24.26 40.69 3.93
5677 5897 7.112122 ACTAACATCATGAGATTTGTTAGCCA 58.888 34.615 29.78 11.15 40.69 4.75
5678 5898 6.446781 AACATCATGAGATTTGTTAGCCAG 57.553 37.500 10.04 0.00 30.20 4.85
5679 5899 5.748402 ACATCATGAGATTTGTTAGCCAGA 58.252 37.500 0.09 0.00 30.20 3.86
5680 5900 6.363065 ACATCATGAGATTTGTTAGCCAGAT 58.637 36.000 0.09 0.00 30.20 2.90
5681 5901 6.832384 ACATCATGAGATTTGTTAGCCAGATT 59.168 34.615 0.09 0.00 30.20 2.40
5682 5902 6.688637 TCATGAGATTTGTTAGCCAGATTG 57.311 37.500 0.00 0.00 0.00 2.67
5683 5903 5.591472 TCATGAGATTTGTTAGCCAGATTGG 59.409 40.000 0.00 0.00 41.55 3.16
5724 5944 8.460831 AACACGCCATAGAAAAATATTTTGAC 57.539 30.769 14.04 11.15 0.00 3.18
5725 5945 7.598278 ACACGCCATAGAAAAATATTTTGACA 58.402 30.769 14.04 3.12 0.00 3.58
5726 5946 7.754924 ACACGCCATAGAAAAATATTTTGACAG 59.245 33.333 14.04 4.42 0.00 3.51
5727 5947 7.754924 CACGCCATAGAAAAATATTTTGACAGT 59.245 33.333 14.04 0.00 0.00 3.55
5728 5948 7.754924 ACGCCATAGAAAAATATTTTGACAGTG 59.245 33.333 14.04 12.34 0.00 3.66
5729 5949 7.253750 CGCCATAGAAAAATATTTTGACAGTGC 60.254 37.037 14.04 11.79 0.00 4.40
5730 5950 7.010460 GCCATAGAAAAATATTTTGACAGTGCC 59.990 37.037 14.04 2.64 0.00 5.01
5731 5951 7.220683 CCATAGAAAAATATTTTGACAGTGCCG 59.779 37.037 14.04 0.00 0.00 5.69
5732 5952 6.084326 AGAAAAATATTTTGACAGTGCCGT 57.916 33.333 14.04 0.00 0.00 5.68
5733 5953 7.209471 AGAAAAATATTTTGACAGTGCCGTA 57.791 32.000 14.04 0.00 0.00 4.02
5734 5954 7.305474 AGAAAAATATTTTGACAGTGCCGTAG 58.695 34.615 14.04 0.00 0.00 3.51
5735 5955 4.616181 AATATTTTGACAGTGCCGTAGC 57.384 40.909 0.00 0.00 40.48 3.58
5736 5956 0.796312 ATTTTGACAGTGCCGTAGCG 59.204 50.000 0.00 0.00 44.31 4.26
5737 5957 0.249531 TTTTGACAGTGCCGTAGCGA 60.250 50.000 0.00 0.00 44.31 4.93
5738 5958 0.249531 TTTGACAGTGCCGTAGCGAA 60.250 50.000 0.00 0.00 44.31 4.70
5739 5959 0.249531 TTGACAGTGCCGTAGCGAAA 60.250 50.000 0.00 0.00 44.31 3.46
5740 5960 0.942410 TGACAGTGCCGTAGCGAAAC 60.942 55.000 0.00 0.00 44.31 2.78
5741 5961 0.942410 GACAGTGCCGTAGCGAAACA 60.942 55.000 0.00 0.00 44.31 2.83
5742 5962 0.320421 ACAGTGCCGTAGCGAAACAT 60.320 50.000 0.00 0.00 44.31 2.71
5743 5963 0.796312 CAGTGCCGTAGCGAAACATT 59.204 50.000 0.00 0.00 44.31 2.71
5744 5964 0.796312 AGTGCCGTAGCGAAACATTG 59.204 50.000 0.00 0.00 44.31 2.82
5745 5965 0.793104 GTGCCGTAGCGAAACATTGC 60.793 55.000 0.00 0.00 44.31 3.56
5746 5966 1.231296 TGCCGTAGCGAAACATTGCA 61.231 50.000 0.00 0.00 44.31 4.08
5747 5967 0.098728 GCCGTAGCGAAACATTGCAT 59.901 50.000 0.00 0.00 0.00 3.96
5748 5968 1.329292 GCCGTAGCGAAACATTGCATA 59.671 47.619 0.00 0.00 0.00 3.14
5749 5969 2.032030 GCCGTAGCGAAACATTGCATAT 60.032 45.455 0.00 0.00 0.00 1.78
5750 5970 3.185594 GCCGTAGCGAAACATTGCATATA 59.814 43.478 0.00 0.00 0.00 0.86
5751 5971 4.142902 GCCGTAGCGAAACATTGCATATAT 60.143 41.667 0.00 0.00 0.00 0.86
5752 5972 5.062934 GCCGTAGCGAAACATTGCATATATA 59.937 40.000 0.00 0.00 0.00 0.86
5753 5973 6.401688 GCCGTAGCGAAACATTGCATATATAA 60.402 38.462 0.00 0.00 0.00 0.98
5754 5974 7.173419 CCGTAGCGAAACATTGCATATATAAG 58.827 38.462 0.00 0.00 0.00 1.73
5755 5975 7.148639 CCGTAGCGAAACATTGCATATATAAGT 60.149 37.037 0.00 0.00 0.00 2.24
5756 5976 8.221100 CGTAGCGAAACATTGCATATATAAGTT 58.779 33.333 0.00 0.00 0.00 2.66
5757 5977 9.878599 GTAGCGAAACATTGCATATATAAGTTT 57.121 29.630 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 8.729805 TGATTACAGTTACATGCATATGTGAA 57.270 30.769 0.00 0.00 46.63 3.18
35 36 6.257849 GGAAGAATGACACGCAAAGACATATA 59.742 38.462 0.00 0.00 0.00 0.86
36 37 5.065218 GGAAGAATGACACGCAAAGACATAT 59.935 40.000 0.00 0.00 0.00 1.78
47 48 4.759782 AGTTCCTATGGAAGAATGACACG 58.240 43.478 0.00 0.00 42.88 4.49
155 156 8.129211 GGTGTTGCTATTTTTATAGATCACACC 58.871 37.037 16.62 16.62 39.72 4.16
173 175 3.508845 ATAGGAAACTGTGGTGTTGCT 57.491 42.857 0.00 0.00 43.88 3.91
238 240 3.988976 AAAGATAGAAGCACTGCTGGA 57.011 42.857 3.73 0.00 39.62 3.86
240 242 4.177026 ACGTAAAGATAGAAGCACTGCTG 58.823 43.478 3.73 0.00 39.62 4.41
242 244 3.552294 GGACGTAAAGATAGAAGCACTGC 59.448 47.826 0.00 0.00 0.00 4.40
243 245 4.113354 GGGACGTAAAGATAGAAGCACTG 58.887 47.826 0.00 0.00 0.00 3.66
244 246 4.388378 GGGACGTAAAGATAGAAGCACT 57.612 45.455 0.00 0.00 0.00 4.40
261 263 0.958876 AACAAAATCGCTCCCGGGAC 60.959 55.000 22.63 15.94 34.70 4.46
265 267 0.179225 CGTCAACAAAATCGCTCCCG 60.179 55.000 0.00 0.00 0.00 5.14
271 273 2.034423 TCACGACACGTCAACAAAATCG 60.034 45.455 0.00 0.00 38.32 3.34
277 279 2.387185 GTGTATCACGACACGTCAACA 58.613 47.619 0.00 0.00 40.33 3.33
289 291 1.076332 GCCACTTCCACGTGTATCAC 58.924 55.000 15.65 0.00 33.07 3.06
295 307 0.949105 GGTGTAGCCACTTCCACGTG 60.949 60.000 9.08 9.08 41.53 4.49
307 319 0.669625 GAACGTCTGGGTGGTGTAGC 60.670 60.000 0.00 0.00 0.00 3.58
334 346 8.303876 TCCGGAAATCATTTTCTCCTTTAAAAG 58.696 33.333 0.00 0.00 40.91 2.27
338 350 9.469097 TTTATCCGGAAATCATTTTCTCCTTTA 57.531 29.630 9.01 0.00 40.91 1.85
359 371 3.061697 CACCTGTAGTTTCGCGGTTTATC 59.938 47.826 6.13 0.00 0.00 1.75
367 379 6.956299 TTTAATAGACACCTGTAGTTTCGC 57.044 37.500 0.00 0.00 30.05 4.70
369 381 8.430828 GTCGTTTTAATAGACACCTGTAGTTTC 58.569 37.037 2.00 0.00 35.19 2.78
377 389 3.256558 GGCGTCGTTTTAATAGACACCT 58.743 45.455 0.00 0.00 35.06 4.00
393 405 6.142798 TCGTTATATTCTAAATCAACGGCGTC 59.857 38.462 15.17 0.00 39.25 5.19
397 409 9.845305 GTTCTTCGTTATATTCTAAATCAACGG 57.155 33.333 14.32 5.36 39.25 4.44
398 410 9.845305 GGTTCTTCGTTATATTCTAAATCAACG 57.155 33.333 10.70 10.70 39.91 4.10
407 419 9.503399 ACTGAAAAAGGTTCTTCGTTATATTCT 57.497 29.630 0.00 0.00 0.00 2.40
408 420 9.543018 CACTGAAAAAGGTTCTTCGTTATATTC 57.457 33.333 0.00 0.00 0.00 1.75
422 434 5.580022 AGGCATAATACCACTGAAAAAGGT 58.420 37.500 0.00 0.00 39.41 3.50
458 471 5.053286 CGTCGTGCCGATGAATTTATTTTTC 60.053 40.000 10.22 0.00 44.49 2.29
475 488 3.533919 TCGTAATTTGTTTTCGTCGTGC 58.466 40.909 0.00 0.00 30.95 5.34
490 503 0.110101 GTTGCCGCGGTTTTCGTAAT 60.110 50.000 28.70 0.00 41.72 1.89
496 509 3.216292 AGCTGTTGCCGCGGTTTT 61.216 55.556 28.70 2.69 40.80 2.43
506 519 4.034258 CAGGCGGTGCAGCTGTTG 62.034 66.667 16.64 5.25 37.29 3.33
507 520 3.772853 TTCAGGCGGTGCAGCTGTT 62.773 57.895 16.64 0.00 37.29 3.16
524 538 5.217393 GTTTTATTCTTTCCGCGAAAGGTT 58.783 37.500 22.16 15.44 46.15 3.50
534 548 9.465985 TTTATGTGAAACCGTTTTATTCTTTCC 57.534 29.630 0.00 0.00 34.36 3.13
552 567 6.039270 CACCAAGTTTTCTCTGGTTTATGTGA 59.961 38.462 0.00 0.00 38.37 3.58
560 575 3.694566 GACAACACCAAGTTTTCTCTGGT 59.305 43.478 0.00 0.00 38.74 4.00
564 579 4.044426 GCATGACAACACCAAGTTTTCTC 58.956 43.478 0.00 0.00 38.74 2.87
566 581 3.779759 TGCATGACAACACCAAGTTTTC 58.220 40.909 0.00 0.00 38.74 2.29
580 595 1.001293 TGTGTCTGGACTCTGCATGAC 59.999 52.381 0.00 0.00 0.00 3.06
588 603 0.952280 TCGTGTCTGTGTCTGGACTC 59.048 55.000 2.38 0.00 34.01 3.36
641 661 5.713025 CTCACAACAATAAAATGGGTGAGG 58.287 41.667 16.77 5.62 44.44 3.86
645 665 6.739331 TTTCCTCACAACAATAAAATGGGT 57.261 33.333 0.00 0.00 0.00 4.51
658 678 4.161189 TCAAAAGCCACAATTTCCTCACAA 59.839 37.500 0.00 0.00 0.00 3.33
733 759 0.184933 TCTCTCTAGAGCTGGCCTCC 59.815 60.000 15.35 0.00 41.74 4.30
743 769 5.011982 TGGAACCCTTTTCTCTCTCTAGA 57.988 43.478 0.00 0.00 0.00 2.43
835 863 1.966451 GCTTTAGGGTGCGTGCAGT 60.966 57.895 0.00 0.00 0.00 4.40
877 905 2.249125 TGGCAGGGAGAGGAGAGGA 61.249 63.158 0.00 0.00 0.00 3.71
878 906 2.063378 GTGGCAGGGAGAGGAGAGG 61.063 68.421 0.00 0.00 0.00 3.69
879 907 2.063378 GGTGGCAGGGAGAGGAGAG 61.063 68.421 0.00 0.00 0.00 3.20
880 908 2.039624 GGTGGCAGGGAGAGGAGA 59.960 66.667 0.00 0.00 0.00 3.71
881 909 3.086600 GGGTGGCAGGGAGAGGAG 61.087 72.222 0.00 0.00 0.00 3.69
882 910 4.741239 GGGGTGGCAGGGAGAGGA 62.741 72.222 0.00 0.00 0.00 3.71
1096 1128 4.808895 GCAAAGAAACCAAGAAAAATCCGT 59.191 37.500 0.00 0.00 0.00 4.69
1097 1129 5.049828 AGCAAAGAAACCAAGAAAAATCCG 58.950 37.500 0.00 0.00 0.00 4.18
1167 1199 2.742053 AGAAAACACAGCGCACGATAAT 59.258 40.909 11.47 0.00 0.00 1.28
1168 1200 2.139917 AGAAAACACAGCGCACGATAA 58.860 42.857 11.47 0.00 0.00 1.75
1170 1202 0.944386 AAGAAAACACAGCGCACGAT 59.056 45.000 11.47 0.00 0.00 3.73
1171 1203 0.730265 AAAGAAAACACAGCGCACGA 59.270 45.000 11.47 0.00 0.00 4.35
1176 1208 4.037690 CAGGAAGAAAAGAAAACACAGCG 58.962 43.478 0.00 0.00 0.00 5.18
1182 1214 5.339008 ACCCAACAGGAAGAAAAGAAAAC 57.661 39.130 0.00 0.00 39.89 2.43
1206 1240 0.109532 TTCACCCATCAAAGCGACCA 59.890 50.000 0.00 0.00 0.00 4.02
1210 1244 1.402968 CTCCATTCACCCATCAAAGCG 59.597 52.381 0.00 0.00 0.00 4.68
1211 1245 2.726821 TCTCCATTCACCCATCAAAGC 58.273 47.619 0.00 0.00 0.00 3.51
1212 1246 3.635373 CCATCTCCATTCACCCATCAAAG 59.365 47.826 0.00 0.00 0.00 2.77
1213 1247 3.011595 ACCATCTCCATTCACCCATCAAA 59.988 43.478 0.00 0.00 0.00 2.69
1218 1252 1.667595 TCACCATCTCCATTCACCCA 58.332 50.000 0.00 0.00 0.00 4.51
1221 1255 3.877559 TCACATCACCATCTCCATTCAC 58.122 45.455 0.00 0.00 0.00 3.18
1229 1267 3.054582 ACAGAGCAATCACATCACCATCT 60.055 43.478 0.00 0.00 0.00 2.90
1392 1431 0.397564 TCACATCAGCCTGCAGACAA 59.602 50.000 17.39 0.00 0.00 3.18
1394 1433 1.747709 AATCACATCAGCCTGCAGAC 58.252 50.000 17.39 2.52 0.00 3.51
1451 1490 3.071023 CCATGTACTTCCGTATCCATGGT 59.929 47.826 12.58 1.59 41.15 3.55
1461 1500 1.091771 CCTGCAGCCATGTACTTCCG 61.092 60.000 8.66 0.00 0.00 4.30
1490 1533 3.817647 GCCATCTAATCTAAAGTGGGCAG 59.182 47.826 0.00 0.00 35.64 4.85
1491 1534 3.201930 TGCCATCTAATCTAAAGTGGGCA 59.798 43.478 0.00 0.00 39.86 5.36
1516 1559 1.067916 CAACCAGGCAGCAACAACC 59.932 57.895 0.00 0.00 0.00 3.77
1528 1571 2.936993 GCACCAGAGACCATACAACCAG 60.937 54.545 0.00 0.00 0.00 4.00
1531 1574 2.472695 TGCACCAGAGACCATACAAC 57.527 50.000 0.00 0.00 0.00 3.32
1571 1615 9.716507 ACATCGCAGTATGTATAAAATGAAAAC 57.283 29.630 0.00 0.00 38.31 2.43
1576 1620 9.715123 TGAAAACATCGCAGTATGTATAAAATG 57.285 29.630 0.00 0.00 39.16 2.32
1582 1628 6.257849 ACGAATGAAAACATCGCAGTATGTAT 59.742 34.615 0.00 0.00 39.16 2.29
1642 1688 6.749118 GCAACAGAAGGATTGATCAACATTAC 59.251 38.462 11.07 0.00 0.00 1.89
1711 1757 1.265095 CAGCAATCGACCACCATATGC 59.735 52.381 0.00 0.00 0.00 3.14
1794 1880 6.540438 TGGTACAGTTAAGATGAACCCTAG 57.460 41.667 0.00 0.00 0.00 3.02
1886 1973 4.028852 TGACAGCGATATATATGCCGAC 57.971 45.455 0.00 0.00 0.00 4.79
1933 2022 4.437239 CGCAGGATATCTCAACAACTCTT 58.563 43.478 2.05 0.00 0.00 2.85
1955 2044 1.514553 GCTGGAAATGAGCAAGGCC 59.485 57.895 0.00 0.00 36.40 5.19
1972 2061 9.109393 TCAAAAGATGTTTATATGTAGTGAGGC 57.891 33.333 0.00 0.00 0.00 4.70
2234 2327 4.314961 AGTGTGATGCAGTCGATGTAAAA 58.685 39.130 0.00 0.00 0.00 1.52
2423 2530 3.209410 GCACATAGGAACCAGATCCAAG 58.791 50.000 0.00 0.00 42.27 3.61
2470 2577 5.241403 ACAATGGATAAACACTGACTGGA 57.759 39.130 0.00 0.00 0.00 3.86
2516 2623 8.597227 TGTACATCGATGTTAGGTTATTTTTCG 58.403 33.333 34.06 1.06 41.97 3.46
2822 2929 2.898729 AGCGTGATCTACTGGATTGG 57.101 50.000 0.00 0.00 34.33 3.16
2838 2945 4.377021 TGGAGTATAAAGGTGCAATAGCG 58.623 43.478 0.00 0.00 46.23 4.26
2849 2956 6.821388 AGCATGTACCTTCTGGAGTATAAAG 58.179 40.000 0.00 0.00 37.04 1.85
2861 2968 4.065088 TCACAGTGAAAGCATGTACCTTC 58.935 43.478 0.00 0.00 0.00 3.46
2862 2969 4.067896 CTCACAGTGAAAGCATGTACCTT 58.932 43.478 4.41 0.00 0.00 3.50
2864 2971 3.664107 TCTCACAGTGAAAGCATGTACC 58.336 45.455 4.41 0.00 0.00 3.34
2866 2973 4.607293 ACTCTCACAGTGAAAGCATGTA 57.393 40.909 3.58 0.00 32.26 2.29
2867 2974 3.482156 ACTCTCACAGTGAAAGCATGT 57.518 42.857 3.58 0.00 32.26 3.21
2868 2975 4.825546 AAACTCTCACAGTGAAAGCATG 57.174 40.909 3.58 0.00 34.56 4.06
2869 2976 5.049129 GCTAAAACTCTCACAGTGAAAGCAT 60.049 40.000 3.58 0.00 35.33 3.79
2870 2977 4.273480 GCTAAAACTCTCACAGTGAAAGCA 59.727 41.667 3.58 0.00 35.33 3.91
2871 2978 4.319839 GGCTAAAACTCTCACAGTGAAAGC 60.320 45.833 3.58 4.96 34.56 3.51
2872 2979 4.816385 TGGCTAAAACTCTCACAGTGAAAG 59.184 41.667 4.41 3.16 34.56 2.62
2873 2980 4.776349 TGGCTAAAACTCTCACAGTGAAA 58.224 39.130 4.41 0.00 34.56 2.69
2939 3046 6.418057 TCATATTGCAGACCCAAAAAGTTT 57.582 33.333 0.00 0.00 0.00 2.66
2947 3054 6.933514 TCATAGTATCATATTGCAGACCCA 57.066 37.500 0.00 0.00 0.00 4.51
3076 3183 5.725110 AGCACAAACGATTCATCAGTATC 57.275 39.130 0.00 0.00 0.00 2.24
3109 3216 9.894783 GAAAACCTAACCTCTTTTGAATAGTTC 57.105 33.333 0.00 0.00 0.00 3.01
3146 3253 2.224281 CGCTCCTTGCCAATCCATACTA 60.224 50.000 0.00 0.00 38.78 1.82
3243 3350 0.950555 TGCACAAGTTAGAGGCAGCG 60.951 55.000 0.00 0.00 0.00 5.18
3269 3376 9.022884 TGGATCAATCATCATTCTGTGTAAAAA 57.977 29.630 0.00 0.00 32.33 1.94
3300 3407 9.801873 GCAAAAGTTATATCAGCAAAGGAATAA 57.198 29.630 0.00 0.00 0.00 1.40
3301 3408 9.189156 AGCAAAAGTTATATCAGCAAAGGAATA 57.811 29.630 0.00 0.00 0.00 1.75
3304 3411 7.466746 AAGCAAAAGTTATATCAGCAAAGGA 57.533 32.000 0.00 0.00 0.00 3.36
3319 3426 1.102978 ACTGCCGTGAAAGCAAAAGT 58.897 45.000 0.00 0.00 40.35 2.66
3320 3428 2.119457 GAACTGCCGTGAAAGCAAAAG 58.881 47.619 0.00 0.00 40.35 2.27
3325 3433 2.422276 AATTGAACTGCCGTGAAAGC 57.578 45.000 0.00 0.00 0.00 3.51
3332 3440 1.339610 TCCCACAAAATTGAACTGCCG 59.660 47.619 0.00 0.00 0.00 5.69
3334 3442 2.223711 ACGTCCCACAAAATTGAACTGC 60.224 45.455 0.00 0.00 0.00 4.40
3373 3481 4.271291 GCTTCTACCCGCTTTAGAGAATTG 59.729 45.833 0.00 0.00 0.00 2.32
3412 3520 3.412386 ACCCTTTCCTCTGATGAAAACG 58.588 45.455 8.99 5.23 31.77 3.60
3467 3575 1.621107 GGTGCAGATCAAACATTGCG 58.379 50.000 0.00 0.00 39.34 4.85
3514 3696 3.645884 CAACCCAATTTGCAGACTTCAG 58.354 45.455 0.00 0.00 0.00 3.02
3515 3697 3.731652 CAACCCAATTTGCAGACTTCA 57.268 42.857 0.00 0.00 0.00 3.02
3540 3723 8.861101 CGATTCCAGTAAACTTACTCAACTTAG 58.139 37.037 0.00 0.00 41.82 2.18
3613 3807 3.195396 CCAATGGGGTTATGAACAGGTTG 59.805 47.826 0.00 0.00 0.00 3.77
3618 3812 4.599720 TCATCCAATGGGGTTATGAACA 57.400 40.909 0.00 0.00 38.11 3.18
3619 3813 7.233348 ACATAATCATCCAATGGGGTTATGAAC 59.767 37.037 20.81 0.00 34.56 3.18
3620 3814 7.233144 CACATAATCATCCAATGGGGTTATGAA 59.767 37.037 20.81 3.18 34.56 2.57
3621 3815 6.720748 CACATAATCATCCAATGGGGTTATGA 59.279 38.462 20.81 13.73 35.16 2.15
3625 3819 4.882559 ACACATAATCATCCAATGGGGTT 58.117 39.130 0.00 0.00 38.11 4.11
3626 3820 4.541250 ACACATAATCATCCAATGGGGT 57.459 40.909 0.00 0.00 38.11 4.95
3627 3821 5.142639 AGAACACATAATCATCCAATGGGG 58.857 41.667 0.00 0.00 38.37 4.96
3628 3822 7.503566 AGTTAGAACACATAATCATCCAATGGG 59.496 37.037 0.00 0.00 0.00 4.00
3629 3823 8.455903 AGTTAGAACACATAATCATCCAATGG 57.544 34.615 0.00 0.00 0.00 3.16
3632 3826 9.739276 AGAAAGTTAGAACACATAATCATCCAA 57.261 29.630 0.00 0.00 0.00 3.53
3633 3827 9.383519 GAGAAAGTTAGAACACATAATCATCCA 57.616 33.333 0.00 0.00 0.00 3.41
3634 3828 8.831550 GGAGAAAGTTAGAACACATAATCATCC 58.168 37.037 0.00 0.00 0.00 3.51
3635 3829 9.606631 AGGAGAAAGTTAGAACACATAATCATC 57.393 33.333 0.00 0.00 0.00 2.92
3636 3830 9.388506 CAGGAGAAAGTTAGAACACATAATCAT 57.611 33.333 0.00 0.00 0.00 2.45
3637 3831 7.824289 CCAGGAGAAAGTTAGAACACATAATCA 59.176 37.037 0.00 0.00 0.00 2.57
3680 3874 8.458573 TTGCAGTTACATAATTATGGGTTAGG 57.541 34.615 25.45 13.23 38.00 2.69
3685 3879 6.639632 AGCTTGCAGTTACATAATTATGGG 57.360 37.500 25.45 12.50 38.00 4.00
3725 3919 6.088085 ACGTCGGTGTAAAAGTAAAGTTATCG 59.912 38.462 0.00 0.00 0.00 2.92
3780 3974 7.992008 ACGAGGAATAAAAAGAAAGTTGACAA 58.008 30.769 0.00 0.00 0.00 3.18
3797 3991 6.238648 ACAGGAAAACAGATTTACGAGGAAT 58.761 36.000 0.00 0.00 36.91 3.01
3804 3998 5.596845 TGCCAAACAGGAAAACAGATTTAC 58.403 37.500 0.00 0.00 41.22 2.01
3827 4021 5.550290 CAATGGAACCTACAGGCAAAAATT 58.450 37.500 0.00 0.00 39.32 1.82
3832 4026 1.075374 AGCAATGGAACCTACAGGCAA 59.925 47.619 0.00 0.00 39.32 4.52
3834 4028 1.474077 CAAGCAATGGAACCTACAGGC 59.526 52.381 0.00 0.00 39.32 4.85
3860 4054 2.092429 AGAAACACAAGGTGAGAGGCAA 60.092 45.455 2.98 0.00 36.96 4.52
3869 4063 3.805971 GCAACGTAGTAGAAACACAAGGT 59.194 43.478 0.00 0.00 45.00 3.50
3882 4077 5.598769 AACTTAAGTTCTCAGCAACGTAGT 58.401 37.500 15.22 0.00 36.02 2.73
3923 4119 3.885297 CAGCTTGTCCTCCTTGAAGAAAA 59.115 43.478 0.00 0.00 0.00 2.29
3945 4141 1.017387 CATAGCCTGGTTTTCCTCGC 58.983 55.000 0.00 0.00 41.38 5.03
4117 4320 5.086621 ACTGGGTATTTCATTGGCTTTCTT 58.913 37.500 0.00 0.00 0.00 2.52
4213 4416 8.366359 AGAAGGTGGAAGCAACATTTTTATAT 57.634 30.769 0.00 0.00 36.26 0.86
4217 4420 4.651045 AGAGAAGGTGGAAGCAACATTTTT 59.349 37.500 0.00 0.00 36.26 1.94
4290 4495 6.064060 CCATTTGAGATATAAGCTTGGGACA 58.936 40.000 9.86 0.00 0.00 4.02
4291 4496 6.299141 TCCATTTGAGATATAAGCTTGGGAC 58.701 40.000 9.86 0.00 0.00 4.46
4292 4497 6.514012 TCCATTTGAGATATAAGCTTGGGA 57.486 37.500 9.86 0.00 0.00 4.37
4293 4498 6.718454 ACATCCATTTGAGATATAAGCTTGGG 59.282 38.462 9.86 0.00 0.00 4.12
4294 4499 7.756395 ACATCCATTTGAGATATAAGCTTGG 57.244 36.000 9.86 0.00 0.00 3.61
4302 4507 9.044646 AGTGCTAGATACATCCATTTGAGATAT 57.955 33.333 0.00 0.00 0.00 1.63
4303 4508 8.427902 AGTGCTAGATACATCCATTTGAGATA 57.572 34.615 0.00 0.00 0.00 1.98
4304 4509 7.313740 AGTGCTAGATACATCCATTTGAGAT 57.686 36.000 0.00 0.00 0.00 2.75
4305 4510 6.737720 AGTGCTAGATACATCCATTTGAGA 57.262 37.500 0.00 0.00 0.00 3.27
4306 4511 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
4307 4512 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
4308 4513 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
4309 4514 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
4310 4515 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
4311 4516 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
4312 4517 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
4313 4518 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
4325 4530 7.041721 TGAATGTATCTAGCACCAAGTTAGTG 58.958 38.462 0.00 0.00 38.30 2.74
4326 4531 7.182817 TGAATGTATCTAGCACCAAGTTAGT 57.817 36.000 0.00 0.00 33.25 2.24
4327 4532 8.668510 AATGAATGTATCTAGCACCAAGTTAG 57.331 34.615 0.00 0.00 32.79 2.34
4328 4533 8.892723 CAAATGAATGTATCTAGCACCAAGTTA 58.107 33.333 0.00 0.00 0.00 2.24
4329 4534 7.611467 TCAAATGAATGTATCTAGCACCAAGTT 59.389 33.333 0.00 0.00 0.00 2.66
4330 4535 7.112122 TCAAATGAATGTATCTAGCACCAAGT 58.888 34.615 0.00 0.00 0.00 3.16
4331 4536 7.255035 CCTCAAATGAATGTATCTAGCACCAAG 60.255 40.741 0.00 0.00 0.00 3.61
4332 4537 6.543465 CCTCAAATGAATGTATCTAGCACCAA 59.457 38.462 0.00 0.00 0.00 3.67
4333 4538 6.057533 CCTCAAATGAATGTATCTAGCACCA 58.942 40.000 0.00 0.00 0.00 4.17
4334 4539 5.471456 CCCTCAAATGAATGTATCTAGCACC 59.529 44.000 0.00 0.00 0.00 5.01
4335 4540 6.203723 GTCCCTCAAATGAATGTATCTAGCAC 59.796 42.308 0.00 0.00 0.00 4.40
4336 4541 6.126796 TGTCCCTCAAATGAATGTATCTAGCA 60.127 38.462 0.00 0.00 0.00 3.49
4337 4542 6.291377 TGTCCCTCAAATGAATGTATCTAGC 58.709 40.000 0.00 0.00 0.00 3.42
4338 4543 7.041508 GCTTGTCCCTCAAATGAATGTATCTAG 60.042 40.741 0.00 0.00 35.48 2.43
4339 4544 6.767902 GCTTGTCCCTCAAATGAATGTATCTA 59.232 38.462 0.00 0.00 35.48 1.98
4340 4545 5.591877 GCTTGTCCCTCAAATGAATGTATCT 59.408 40.000 0.00 0.00 35.48 1.98
4341 4546 5.591877 AGCTTGTCCCTCAAATGAATGTATC 59.408 40.000 0.00 0.00 35.48 2.24
4342 4547 5.513233 AGCTTGTCCCTCAAATGAATGTAT 58.487 37.500 0.00 0.00 35.48 2.29
4343 4548 4.922206 AGCTTGTCCCTCAAATGAATGTA 58.078 39.130 0.00 0.00 35.48 2.29
4344 4549 3.771216 AGCTTGTCCCTCAAATGAATGT 58.229 40.909 0.00 0.00 35.48 2.71
4345 4550 4.796038 AAGCTTGTCCCTCAAATGAATG 57.204 40.909 0.00 0.00 35.48 2.67
4346 4551 5.813513 AAAAGCTTGTCCCTCAAATGAAT 57.186 34.783 0.00 0.00 35.48 2.57
4347 4552 5.600696 GAAAAAGCTTGTCCCTCAAATGAA 58.399 37.500 0.00 0.00 35.48 2.57
4348 4553 4.261572 CGAAAAAGCTTGTCCCTCAAATGA 60.262 41.667 0.00 0.00 35.48 2.57
4349 4554 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
4350 4555 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
4351 4556 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
4352 4557 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
4353 4558 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
4354 4559 1.535896 GTCCGAAAAAGCTTGTCCCTC 59.464 52.381 0.00 0.00 0.00 4.30
4355 4560 1.605753 GTCCGAAAAAGCTTGTCCCT 58.394 50.000 0.00 0.00 0.00 4.20
4356 4561 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
4357 4562 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
4358 4563 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
4359 4564 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
4360 4565 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
4361 4566 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
4362 4567 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
4363 4568 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
4364 4569 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
4365 4570 0.034337 CACTCCCTCCGTCCGAAAAA 59.966 55.000 0.00 0.00 0.00 1.94
4366 4571 1.117142 ACACTCCCTCCGTCCGAAAA 61.117 55.000 0.00 0.00 0.00 2.29
4367 4572 0.251297 TACACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
4368 4573 0.033796 ATACACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
4369 4574 0.465097 GATACACTCCCTCCGTCCGA 60.465 60.000 0.00 0.00 0.00 4.55
4370 4575 0.465824 AGATACACTCCCTCCGTCCG 60.466 60.000 0.00 0.00 0.00 4.79
4371 4576 1.777941 AAGATACACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
4372 4577 3.889520 AAAAGATACACTCCCTCCGTC 57.110 47.619 0.00 0.00 0.00 4.79
4373 4578 3.838903 AGAAAAAGATACACTCCCTCCGT 59.161 43.478 0.00 0.00 0.00 4.69
4374 4579 4.473477 AGAAAAAGATACACTCCCTCCG 57.527 45.455 0.00 0.00 0.00 4.63
4375 4580 5.805728 TCAAGAAAAAGATACACTCCCTCC 58.194 41.667 0.00 0.00 0.00 4.30
4376 4581 7.929941 ATTCAAGAAAAAGATACACTCCCTC 57.070 36.000 0.00 0.00 0.00 4.30
4377 4582 8.579863 CAAATTCAAGAAAAAGATACACTCCCT 58.420 33.333 0.00 0.00 0.00 4.20
4378 4583 7.814587 CCAAATTCAAGAAAAAGATACACTCCC 59.185 37.037 0.00 0.00 0.00 4.30
4379 4584 8.576442 TCCAAATTCAAGAAAAAGATACACTCC 58.424 33.333 0.00 0.00 0.00 3.85
4525 4730 1.670967 GCATTCTTGGACAAGCAAGCC 60.671 52.381 7.18 0.00 38.28 4.35
4545 4750 3.485743 GCTTGCCGTCTGTAAACAAAAAG 59.514 43.478 0.00 0.00 0.00 2.27
4651 4857 0.106708 TTTAGCATAGCCAGCTCCCG 59.893 55.000 0.00 0.00 42.32 5.14
4662 4868 2.235155 TCGCAGGGTTGAGTTTAGCATA 59.765 45.455 0.00 0.00 0.00 3.14
5073 5281 4.522114 TCTCTAGTCTGTCTGTCATGGAG 58.478 47.826 0.00 0.00 0.00 3.86
5206 5415 6.126361 ACAAGCTGATGATCCTTATACCCTTT 60.126 38.462 0.00 0.00 0.00 3.11
5285 5494 6.053005 TGACATTAAAAACCAGACTTCGACT 58.947 36.000 0.00 0.00 0.00 4.18
5362 5576 0.685785 TGCCAGAACCCAAAACTGCA 60.686 50.000 0.00 0.00 0.00 4.41
5366 5580 2.871633 CAAACATGCCAGAACCCAAAAC 59.128 45.455 0.00 0.00 0.00 2.43
5408 5622 2.569059 CCAGCAGTAACATCCCATCTG 58.431 52.381 0.00 0.00 0.00 2.90
5421 5635 2.671070 CACGGGATTCCCAGCAGT 59.329 61.111 21.72 8.28 45.83 4.40
5428 5642 2.499685 CGTCTCCCACGGGATTCC 59.500 66.667 4.97 0.00 45.46 3.01
5449 5669 4.687483 ACAATAATACAGTATTACCGCGGC 59.313 41.667 28.58 8.62 33.80 6.53
5453 5673 9.710979 CCAAACAACAATAATACAGTATTACCG 57.289 33.333 14.19 10.90 33.80 4.02
5460 5680 9.174166 GTATCCTCCAAACAACAATAATACAGT 57.826 33.333 0.00 0.00 0.00 3.55
5488 5708 0.956633 CCCACACATGCATATGCCTC 59.043 55.000 24.54 0.00 41.18 4.70
5493 5713 3.754965 GGATACACCCACACATGCATAT 58.245 45.455 0.00 0.00 0.00 1.78
5494 5714 2.484594 CGGATACACCCACACATGCATA 60.485 50.000 0.00 0.00 34.64 3.14
5495 5715 1.746861 CGGATACACCCACACATGCAT 60.747 52.381 0.00 0.00 34.64 3.96
5496 5716 0.392327 CGGATACACCCACACATGCA 60.392 55.000 0.00 0.00 34.64 3.96
5497 5717 1.095228 CCGGATACACCCACACATGC 61.095 60.000 0.00 0.00 34.64 4.06
5498 5718 0.251916 ACCGGATACACCCACACATG 59.748 55.000 9.46 0.00 34.64 3.21
5499 5719 0.251916 CACCGGATACACCCACACAT 59.748 55.000 9.46 0.00 34.64 3.21
5500 5720 1.674637 CACCGGATACACCCACACA 59.325 57.895 9.46 0.00 34.64 3.72
5501 5721 1.078708 CCACCGGATACACCCACAC 60.079 63.158 9.46 0.00 34.64 3.82
5502 5722 0.836830 TTCCACCGGATACACCCACA 60.837 55.000 9.46 0.00 34.64 4.17
5503 5723 0.325602 TTTCCACCGGATACACCCAC 59.674 55.000 9.46 0.00 34.64 4.61
5504 5724 1.065647 TTTTCCACCGGATACACCCA 58.934 50.000 9.46 0.00 34.64 4.51
5505 5725 2.203470 TTTTTCCACCGGATACACCC 57.797 50.000 9.46 0.00 34.64 4.61
5506 5726 3.349022 TGATTTTTCCACCGGATACACC 58.651 45.455 9.46 0.00 0.00 4.16
5511 5731 2.514458 AGCTGATTTTTCCACCGGAT 57.486 45.000 9.46 0.00 0.00 4.18
5513 5733 3.756434 TCTTAAGCTGATTTTTCCACCGG 59.244 43.478 0.00 0.00 0.00 5.28
5525 5745 9.897744 CAATGTTTGATAAACTTCTTAAGCTGA 57.102 29.630 0.00 0.00 41.90 4.26
5536 5756 7.947890 TCCTTTAGGTCCAATGTTTGATAAACT 59.052 33.333 6.07 0.00 38.11 2.66
5539 5759 8.167392 TCTTCCTTTAGGTCCAATGTTTGATAA 58.833 33.333 0.00 0.00 36.34 1.75
5541 5761 6.552008 TCTTCCTTTAGGTCCAATGTTTGAT 58.448 36.000 0.00 0.00 36.34 2.57
5556 5776 3.749609 GCGGCTACAACTTTCTTCCTTTA 59.250 43.478 0.00 0.00 0.00 1.85
5559 5779 1.809684 GCGGCTACAACTTTCTTCCT 58.190 50.000 0.00 0.00 0.00 3.36
5561 5781 1.145803 ACGCGGCTACAACTTTCTTC 58.854 50.000 12.47 0.00 0.00 2.87
5569 5789 2.962125 TCTATTTGAACGCGGCTACAA 58.038 42.857 12.47 8.21 0.00 2.41
5575 5795 5.907197 AACTGATATCTATTTGAACGCGG 57.093 39.130 12.47 0.00 0.00 6.46
5593 5813 6.176183 AGGGACTGAACAATCTATCAAACTG 58.824 40.000 0.00 0.00 37.18 3.16
5596 5816 8.041323 GTCTAAGGGACTGAACAATCTATCAAA 58.959 37.037 0.00 0.00 40.86 2.69
5629 5849 7.560368 AGTCTAGGGATAGAACAAATCTGTTG 58.440 38.462 0.00 0.00 45.98 3.33
5631 5851 8.697292 GTTAGTCTAGGGATAGAACAAATCTGT 58.303 37.037 0.00 0.00 39.30 3.41
5632 5852 8.696374 TGTTAGTCTAGGGATAGAACAAATCTG 58.304 37.037 0.00 0.00 39.30 2.90
5633 5853 8.840200 TGTTAGTCTAGGGATAGAACAAATCT 57.160 34.615 0.00 0.00 42.48 2.40
5634 5854 9.699703 GATGTTAGTCTAGGGATAGAACAAATC 57.300 37.037 0.00 0.00 0.00 2.17
5635 5855 9.213777 TGATGTTAGTCTAGGGATAGAACAAAT 57.786 33.333 0.00 0.00 0.00 2.32
5636 5856 8.603898 TGATGTTAGTCTAGGGATAGAACAAA 57.396 34.615 0.00 0.00 0.00 2.83
5637 5857 8.642432 CATGATGTTAGTCTAGGGATAGAACAA 58.358 37.037 0.00 0.00 0.00 2.83
5638 5858 8.004801 TCATGATGTTAGTCTAGGGATAGAACA 58.995 37.037 0.00 0.00 0.00 3.18
5639 5859 8.410673 TCATGATGTTAGTCTAGGGATAGAAC 57.589 38.462 0.00 0.00 0.00 3.01
5640 5860 8.448816 TCTCATGATGTTAGTCTAGGGATAGAA 58.551 37.037 0.00 0.00 0.00 2.10
5641 5861 7.990055 TCTCATGATGTTAGTCTAGGGATAGA 58.010 38.462 0.00 0.00 0.00 1.98
5642 5862 8.821686 ATCTCATGATGTTAGTCTAGGGATAG 57.178 38.462 0.00 0.00 0.00 2.08
5643 5863 9.607333 AAATCTCATGATGTTAGTCTAGGGATA 57.393 33.333 0.00 0.00 32.44 2.59
5644 5864 8.373981 CAAATCTCATGATGTTAGTCTAGGGAT 58.626 37.037 0.00 0.00 32.44 3.85
5645 5865 7.345653 ACAAATCTCATGATGTTAGTCTAGGGA 59.654 37.037 0.00 0.00 32.44 4.20
5646 5866 7.504403 ACAAATCTCATGATGTTAGTCTAGGG 58.496 38.462 0.00 0.00 32.44 3.53
5647 5867 8.954950 AACAAATCTCATGATGTTAGTCTAGG 57.045 34.615 10.04 0.00 32.44 3.02
5649 5869 9.534565 GCTAACAAATCTCATGATGTTAGTCTA 57.465 33.333 29.78 11.40 39.20 2.59
5650 5870 7.497249 GGCTAACAAATCTCATGATGTTAGTCT 59.503 37.037 29.78 9.72 38.88 3.24
5651 5871 7.280876 TGGCTAACAAATCTCATGATGTTAGTC 59.719 37.037 28.57 28.57 40.44 2.59
5652 5872 7.112122 TGGCTAACAAATCTCATGATGTTAGT 58.888 34.615 29.78 13.51 39.20 2.24
5653 5873 7.496920 TCTGGCTAACAAATCTCATGATGTTAG 59.503 37.037 27.64 27.64 39.55 2.34
5654 5874 7.337938 TCTGGCTAACAAATCTCATGATGTTA 58.662 34.615 15.41 15.41 32.44 2.41
5655 5875 6.182627 TCTGGCTAACAAATCTCATGATGTT 58.817 36.000 14.89 14.89 32.44 2.71
5656 5876 5.748402 TCTGGCTAACAAATCTCATGATGT 58.252 37.500 0.00 0.00 32.44 3.06
5657 5877 6.879276 ATCTGGCTAACAAATCTCATGATG 57.121 37.500 0.00 0.00 32.44 3.07
5698 5918 9.562583 GTCAAAATATTTTTCTATGGCGTGTTA 57.437 29.630 10.77 0.00 0.00 2.41
5699 5919 8.085296 TGTCAAAATATTTTTCTATGGCGTGTT 58.915 29.630 10.77 0.00 0.00 3.32
5700 5920 7.598278 TGTCAAAATATTTTTCTATGGCGTGT 58.402 30.769 10.77 0.00 0.00 4.49
5701 5921 7.754924 ACTGTCAAAATATTTTTCTATGGCGTG 59.245 33.333 10.77 2.65 0.00 5.34
5702 5922 7.754924 CACTGTCAAAATATTTTTCTATGGCGT 59.245 33.333 10.77 2.83 0.00 5.68
5703 5923 7.253750 GCACTGTCAAAATATTTTTCTATGGCG 60.254 37.037 10.77 2.30 0.00 5.69
5704 5924 7.010460 GGCACTGTCAAAATATTTTTCTATGGC 59.990 37.037 10.77 13.06 0.00 4.40
5705 5925 7.220683 CGGCACTGTCAAAATATTTTTCTATGG 59.779 37.037 10.77 0.00 0.00 2.74
5706 5926 7.754924 ACGGCACTGTCAAAATATTTTTCTATG 59.245 33.333 10.77 7.43 0.00 2.23
5707 5927 7.826690 ACGGCACTGTCAAAATATTTTTCTAT 58.173 30.769 10.77 0.00 0.00 1.98
5708 5928 7.209471 ACGGCACTGTCAAAATATTTTTCTA 57.791 32.000 10.77 0.00 0.00 2.10
5709 5929 6.084326 ACGGCACTGTCAAAATATTTTTCT 57.916 33.333 10.77 0.00 0.00 2.52
5710 5930 6.033513 GCTACGGCACTGTCAAAATATTTTTC 59.966 38.462 10.77 8.02 38.54 2.29
5711 5931 5.861787 GCTACGGCACTGTCAAAATATTTTT 59.138 36.000 10.77 0.00 38.54 1.94
5712 5932 5.399013 GCTACGGCACTGTCAAAATATTTT 58.601 37.500 7.64 7.64 38.54 1.82
5713 5933 4.436852 CGCTACGGCACTGTCAAAATATTT 60.437 41.667 0.00 0.00 38.60 1.40
5714 5934 3.063452 CGCTACGGCACTGTCAAAATATT 59.937 43.478 0.00 0.00 38.60 1.28
5715 5935 2.607635 CGCTACGGCACTGTCAAAATAT 59.392 45.455 0.00 0.00 38.60 1.28
5716 5936 1.996898 CGCTACGGCACTGTCAAAATA 59.003 47.619 0.00 0.00 38.60 1.40
5717 5937 0.796312 CGCTACGGCACTGTCAAAAT 59.204 50.000 0.00 0.00 38.60 1.82
5718 5938 0.249531 TCGCTACGGCACTGTCAAAA 60.250 50.000 0.00 0.00 38.60 2.44
5719 5939 0.249531 TTCGCTACGGCACTGTCAAA 60.250 50.000 0.00 0.00 38.60 2.69
5720 5940 0.249531 TTTCGCTACGGCACTGTCAA 60.250 50.000 0.00 0.00 38.60 3.18
5721 5941 0.942410 GTTTCGCTACGGCACTGTCA 60.942 55.000 0.00 0.00 38.60 3.58
5722 5942 0.942410 TGTTTCGCTACGGCACTGTC 60.942 55.000 0.00 0.00 38.60 3.51
5723 5943 0.320421 ATGTTTCGCTACGGCACTGT 60.320 50.000 0.00 0.00 38.60 3.55
5724 5944 0.796312 AATGTTTCGCTACGGCACTG 59.204 50.000 0.00 0.00 38.60 3.66
5725 5945 0.796312 CAATGTTTCGCTACGGCACT 59.204 50.000 0.00 0.00 38.60 4.40
5726 5946 0.793104 GCAATGTTTCGCTACGGCAC 60.793 55.000 0.00 0.00 38.60 5.01
5727 5947 1.231296 TGCAATGTTTCGCTACGGCA 61.231 50.000 0.00 0.00 38.60 5.69
5728 5948 0.098728 ATGCAATGTTTCGCTACGGC 59.901 50.000 0.00 0.00 0.00 5.68
5729 5949 3.878086 ATATGCAATGTTTCGCTACGG 57.122 42.857 0.00 0.00 0.00 4.02
5730 5950 7.729836 ACTTATATATGCAATGTTTCGCTACG 58.270 34.615 0.00 0.00 0.00 3.51
5731 5951 9.878599 AAACTTATATATGCAATGTTTCGCTAC 57.121 29.630 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.