Multiple sequence alignment - TraesCS5A01G467800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G467800 chr5A 100.000 2895 0 0 1 2895 645492856 645495750 0.000000e+00 5347.0
1 TraesCS5A01G467800 chr5A 91.000 100 8 1 2797 2895 74736036 74735937 1.810000e-27 134.0
2 TraesCS5A01G467800 chr5A 95.181 83 4 0 2813 2895 394832992 394833074 6.510000e-27 132.0
3 TraesCS5A01G467800 chr5A 100.000 32 0 0 2306 2337 554211786 554211817 3.120000e-05 60.2
4 TraesCS5A01G467800 chr5A 100.000 28 0 0 2280 2307 675522502 675522529 5.000000e-03 52.8
5 TraesCS5A01G467800 chr5B 87.956 2275 140 57 1 2163 652820959 652823211 0.000000e+00 2560.0
6 TraesCS5A01G467800 chr5B 91.373 255 18 3 2460 2711 652824821 652825074 2.140000e-91 346.0
7 TraesCS5A01G467800 chr5B 90.071 141 10 4 2664 2803 652825188 652825325 2.290000e-41 180.0
8 TraesCS5A01G467800 chr5B 96.610 59 2 0 2105 2163 652824768 652824826 6.600000e-17 99.0
9 TraesCS5A01G467800 chr5B 80.620 129 20 5 15 140 16611310 16611436 8.540000e-16 95.3
10 TraesCS5A01G467800 chr5B 80.620 129 20 5 15 140 16643686 16643812 8.540000e-16 95.3
11 TraesCS5A01G467800 chr5B 79.070 129 22 5 15 140 16667857 16667983 1.850000e-12 84.2
12 TraesCS5A01G467800 chr5B 78.295 129 23 5 15 140 16529139 16529265 8.600000e-11 78.7
13 TraesCS5A01G467800 chr5B 78.295 129 23 5 15 140 16572739 16572865 8.600000e-11 78.7
14 TraesCS5A01G467800 chr5D 89.512 1659 86 27 562 2148 519179193 519180835 0.000000e+00 2019.0
15 TraesCS5A01G467800 chr5D 90.313 351 20 7 2461 2803 519180844 519181188 5.690000e-122 448.0
16 TraesCS5A01G467800 chr5D 93.976 83 5 0 2813 2895 526115686 526115604 3.030000e-25 126.0
17 TraesCS5A01G467800 chr3A 95.181 83 4 0 2813 2895 434948119 434948201 6.510000e-27 132.0
18 TraesCS5A01G467800 chr1A 95.181 83 4 0 2813 2895 401979513 401979595 6.510000e-27 132.0
19 TraesCS5A01G467800 chr1A 93.976 83 5 0 2813 2895 161229200 161229282 3.030000e-25 126.0
20 TraesCS5A01G467800 chr1A 93.976 83 5 0 2813 2895 194632023 194632105 3.030000e-25 126.0
21 TraesCS5A01G467800 chr1A 93.976 83 5 0 2813 2895 228874913 228874831 3.030000e-25 126.0
22 TraesCS5A01G467800 chr1A 93.976 83 5 0 2813 2895 231450137 231450055 3.030000e-25 126.0
23 TraesCS5A01G467800 chr4A 85.484 124 14 4 15 138 57517911 57517792 3.030000e-25 126.0
24 TraesCS5A01G467800 chr3D 83.740 123 12 5 2334 2451 294924904 294925023 3.050000e-20 110.0
25 TraesCS5A01G467800 chr6B 80.420 143 19 6 1 140 437845895 437845759 1.840000e-17 100.0
26 TraesCS5A01G467800 chr6B 80.851 94 15 3 49 140 26136852 26136944 1.440000e-08 71.3
27 TraesCS5A01G467800 chr2A 88.710 62 7 0 2205 2266 221301374 221301435 3.090000e-10 76.8
28 TraesCS5A01G467800 chr6D 100.000 36 0 0 2306 2341 381385328 381385293 1.860000e-07 67.6
29 TraesCS5A01G467800 chr6A 100.000 33 0 0 2306 2338 533257285 533257253 8.660000e-06 62.1
30 TraesCS5A01G467800 chr2B 100.000 33 0 0 2306 2338 342500022 342500054 8.660000e-06 62.1
31 TraesCS5A01G467800 chr2B 100.000 28 0 0 2276 2303 131321137 131321110 5.000000e-03 52.8
32 TraesCS5A01G467800 chr3B 100.000 29 0 0 2309 2337 804381753 804381725 1.000000e-03 54.7
33 TraesCS5A01G467800 chr3B 100.000 28 0 0 2278 2305 31651093 31651066 5.000000e-03 52.8
34 TraesCS5A01G467800 chr1D 92.105 38 3 0 2271 2308 50205486 50205449 1.000000e-03 54.7
35 TraesCS5A01G467800 chr1D 100.000 29 0 0 2277 2305 225406039 225406067 1.000000e-03 54.7
36 TraesCS5A01G467800 chr1D 100.000 28 0 0 2278 2305 221021447 221021420 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G467800 chr5A 645492856 645495750 2894 False 5347.00 5347 100.0000 1 2895 1 chr5A.!!$F3 2894
1 TraesCS5A01G467800 chr5B 652820959 652825325 4366 False 796.25 2560 91.5025 1 2803 4 chr5B.!!$F6 2802
2 TraesCS5A01G467800 chr5D 519179193 519181188 1995 False 1233.50 2019 89.9125 562 2803 2 chr5D.!!$F1 2241

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 501 0.249868 CGATGGCGGGACACATATGT 60.25 55.0 1.41 1.41 43.71 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2455 4232 0.178903 TGTTCTGGCCAGTACTCCCT 60.179 55.0 33.99 0.0 31.14 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.257830 GACAAAAACAAAAATTTACTCCACCA 57.742 30.769 0.00 0.00 0.00 4.17
27 28 9.067986 ACAAAAACAAAAATTTACTCCACCAAA 57.932 25.926 0.00 0.00 0.00 3.28
31 32 9.454859 AAACAAAAATTTACTCCACCAAATTCA 57.545 25.926 0.00 0.00 34.17 2.57
32 33 9.454859 AACAAAAATTTACTCCACCAAATTCAA 57.545 25.926 0.00 0.00 34.17 2.69
41 42 2.884639 CCACCAAATTCAAGAGTTCGGT 59.115 45.455 0.00 0.00 0.00 4.69
69 70 3.255725 CGGCCGAAACTTAGTGATGTAA 58.744 45.455 24.07 0.00 0.00 2.41
96 97 4.683832 ACTTCACTATAGCTAACTTGGCG 58.316 43.478 0.00 0.00 34.52 5.69
97 98 3.093717 TCACTATAGCTAACTTGGCGC 57.906 47.619 0.00 0.00 34.52 6.53
150 152 2.171003 GATGCCCTAATGCCCCAATAC 58.829 52.381 0.00 0.00 0.00 1.89
174 176 3.268330 GGAAACTAAACTCCCATCCGTC 58.732 50.000 0.00 0.00 0.00 4.79
335 337 9.999660 TTTGTAGGAGTGTATGTGTTGTAATTA 57.000 29.630 0.00 0.00 0.00 1.40
370 372 4.498513 CGTCAATAGATGGTACTTACGCCA 60.499 45.833 0.00 0.00 39.33 5.69
373 375 6.145696 GTCAATAGATGGTACTTACGCCAATC 59.854 42.308 0.00 0.00 38.38 2.67
378 380 1.525619 GGTACTTACGCCAATCGATGC 59.474 52.381 0.00 0.00 41.67 3.91
379 381 2.198406 GTACTTACGCCAATCGATGCA 58.802 47.619 0.00 0.00 41.67 3.96
437 439 7.606456 TCCACGAATTTGAGCTTTACTTCTATT 59.394 33.333 0.00 0.00 0.00 1.73
462 464 8.893563 TTTAAATCCTTGATACCTTGTGGATT 57.106 30.769 0.00 0.00 43.54 3.01
473 475 4.202441 ACCTTGTGGATTGCATAGCTTAG 58.798 43.478 0.00 0.00 37.04 2.18
499 501 0.249868 CGATGGCGGGACACATATGT 60.250 55.000 1.41 1.41 43.71 2.29
519 521 9.061610 CATATGTTGGTTTCGTTAATCTTGAAC 57.938 33.333 0.00 0.00 0.00 3.18
550 556 4.884744 ACTCTAATCTCTAGCTTTCTCGCA 59.115 41.667 0.00 0.00 0.00 5.10
653 661 1.308069 ACGCGCCATGCTTCTTCATT 61.308 50.000 5.73 0.00 43.27 2.57
656 664 1.401552 GCGCCATGCTTCTTCATTGTA 59.598 47.619 0.00 0.00 41.73 2.41
692 709 9.748100 GTTTCTCTTCTCGATGAGAATTAAAAC 57.252 33.333 19.55 13.84 45.84 2.43
769 816 1.050767 GAAACTTCCACGACGACTCG 58.949 55.000 0.00 0.00 46.06 4.18
782 833 1.000163 ACGACTCGACTGTGCTTTCAT 60.000 47.619 5.20 0.00 0.00 2.57
784 835 2.669670 CGACTCGACTGTGCTTTCATCT 60.670 50.000 0.00 0.00 0.00 2.90
802 853 5.482006 TCATCTTGTACCACTCACATGAAG 58.518 41.667 0.00 0.00 34.80 3.02
855 919 4.759782 AGGAAACTAATCATCACTCACCG 58.240 43.478 0.00 0.00 40.61 4.94
861 925 2.969628 ATCATCACTCACCGAAGTCC 57.030 50.000 0.00 0.00 0.00 3.85
871 935 2.821378 TCACCGAAGTCCGAAAGTCATA 59.179 45.455 0.00 0.00 41.76 2.15
875 939 2.592897 CGAAGTCCGAAAGTCATACACG 59.407 50.000 0.00 0.00 41.76 4.49
876 940 3.572584 GAAGTCCGAAAGTCATACACGT 58.427 45.455 0.00 0.00 0.00 4.49
877 941 4.669965 CGAAGTCCGAAAGTCATACACGTA 60.670 45.833 0.00 0.00 41.76 3.57
878 942 4.978083 AGTCCGAAAGTCATACACGTAT 57.022 40.909 0.00 0.00 0.00 3.06
894 959 4.521639 ACACGTATCAGTACAAGAAGTGGA 59.478 41.667 17.33 0.00 0.00 4.02
899 964 7.974501 ACGTATCAGTACAAGAAGTGGATTAAG 59.025 37.037 0.00 0.00 0.00 1.85
922 987 0.883370 ACGGTCGAGAAGCCCAAAAC 60.883 55.000 0.00 0.00 0.00 2.43
945 1029 2.170985 CGACTTGCCGCGAACTTG 59.829 61.111 8.23 0.00 0.00 3.16
952 1036 4.025401 CCGCGAACTTGCACCACC 62.025 66.667 8.23 0.00 34.15 4.61
953 1037 2.972505 CGCGAACTTGCACCACCT 60.973 61.111 0.00 0.00 34.15 4.00
1016 1106 6.768381 TGTCTCCCTATATATATGCAGTCGAG 59.232 42.308 5.44 3.83 0.00 4.04
1017 1107 6.205853 GTCTCCCTATATATATGCAGTCGAGG 59.794 46.154 5.44 2.45 0.00 4.63
1026 1116 2.660064 GCAGTCGAGGGTCCATGGT 61.660 63.158 12.58 0.00 0.00 3.55
1049 1145 1.242076 ACATCAACAGCACAGCTTCC 58.758 50.000 0.00 0.00 36.40 3.46
1050 1146 1.202855 ACATCAACAGCACAGCTTCCT 60.203 47.619 0.00 0.00 36.40 3.36
1093 1192 3.306973 CACGTGTTTGTCGATCTGCATAT 59.693 43.478 7.58 0.00 0.00 1.78
1402 1507 4.366684 CCTGGGCCTGGTTCCACC 62.367 72.222 20.63 0.00 39.22 4.61
1451 1562 1.228124 CGGGATGGTTGTGTGTGGT 60.228 57.895 0.00 0.00 0.00 4.16
1778 1896 3.386543 AGTGGTGCACTGTGAAGTC 57.613 52.632 17.98 0.00 43.63 3.01
1798 1916 1.201825 GACTGTTCAAGTCGCGTGC 59.798 57.895 5.77 0.00 45.76 5.34
1918 2062 9.476202 TGAATAATAAGATCGATGTGTACAAGG 57.524 33.333 0.54 0.00 0.00 3.61
1923 2067 4.495422 AGATCGATGTGTACAAGGTTCAC 58.505 43.478 0.54 0.00 35.05 3.18
1960 2108 1.523154 TTGACAGGAAATGCACGGCC 61.523 55.000 0.00 0.00 0.00 6.13
1964 2121 1.978617 AGGAAATGCACGGCCCAAG 60.979 57.895 0.00 0.00 0.00 3.61
2051 2213 1.612676 TTTGCTTGACATGCTGCTCT 58.387 45.000 13.81 0.00 0.00 4.09
2052 2214 2.477845 TTGCTTGACATGCTGCTCTA 57.522 45.000 13.81 0.00 0.00 2.43
2053 2215 2.019948 TGCTTGACATGCTGCTCTAG 57.980 50.000 13.81 0.00 0.00 2.43
2151 3928 2.229784 GTGCAATTCTCCCTTCCAGTTG 59.770 50.000 0.00 0.00 0.00 3.16
2159 3936 0.825010 CCCTTCCAGTTGCAGCAAGT 60.825 55.000 8.49 9.25 0.00 3.16
2160 3937 1.545428 CCCTTCCAGTTGCAGCAAGTA 60.545 52.381 15.35 0.00 0.00 2.24
2161 3938 1.537202 CCTTCCAGTTGCAGCAAGTAC 59.463 52.381 15.35 0.97 0.00 2.73
2162 3939 2.498167 CTTCCAGTTGCAGCAAGTACT 58.502 47.619 15.35 3.62 0.00 2.73
2163 3940 2.169832 TCCAGTTGCAGCAAGTACTC 57.830 50.000 15.35 0.00 0.00 2.59
2164 3941 1.160137 CCAGTTGCAGCAAGTACTCC 58.840 55.000 15.35 0.00 0.00 3.85
2165 3942 1.160137 CAGTTGCAGCAAGTACTCCC 58.840 55.000 15.35 0.00 0.00 4.30
2166 3943 1.059913 AGTTGCAGCAAGTACTCCCT 58.940 50.000 14.18 0.00 0.00 4.20
2167 3944 1.002544 AGTTGCAGCAAGTACTCCCTC 59.997 52.381 14.18 0.00 0.00 4.30
2168 3945 0.324943 TTGCAGCAAGTACTCCCTCC 59.675 55.000 2.83 0.00 0.00 4.30
2169 3946 1.153549 GCAGCAAGTACTCCCTCCG 60.154 63.158 0.00 0.00 0.00 4.63
2170 3947 1.889530 GCAGCAAGTACTCCCTCCGT 61.890 60.000 0.00 0.00 0.00 4.69
2171 3948 0.173708 CAGCAAGTACTCCCTCCGTC 59.826 60.000 0.00 0.00 0.00 4.79
2172 3949 0.251653 AGCAAGTACTCCCTCCGTCA 60.252 55.000 0.00 0.00 0.00 4.35
2173 3950 0.173708 GCAAGTACTCCCTCCGTCAG 59.826 60.000 0.00 0.00 0.00 3.51
2174 3951 0.173708 CAAGTACTCCCTCCGTCAGC 59.826 60.000 0.00 0.00 0.00 4.26
2175 3952 1.313812 AAGTACTCCCTCCGTCAGCG 61.314 60.000 0.00 0.00 37.95 5.18
2176 3953 1.748122 GTACTCCCTCCGTCAGCGA 60.748 63.158 0.00 0.00 41.33 4.93
2177 3954 1.001764 TACTCCCTCCGTCAGCGAA 60.002 57.895 0.00 0.00 41.33 4.70
2178 3955 0.395311 TACTCCCTCCGTCAGCGAAT 60.395 55.000 0.00 0.00 41.33 3.34
2179 3956 0.395311 ACTCCCTCCGTCAGCGAATA 60.395 55.000 0.00 0.00 41.33 1.75
2180 3957 0.744874 CTCCCTCCGTCAGCGAATAA 59.255 55.000 0.00 0.00 41.33 1.40
2181 3958 0.744874 TCCCTCCGTCAGCGAATAAG 59.255 55.000 0.00 0.00 41.33 1.73
2182 3959 0.460311 CCCTCCGTCAGCGAATAAGT 59.540 55.000 0.00 0.00 41.33 2.24
2183 3960 1.679680 CCCTCCGTCAGCGAATAAGTA 59.320 52.381 0.00 0.00 41.33 2.24
2184 3961 2.543238 CCCTCCGTCAGCGAATAAGTAC 60.543 54.545 0.00 0.00 41.33 2.73
2185 3962 2.358267 CCTCCGTCAGCGAATAAGTACT 59.642 50.000 0.00 0.00 41.33 2.73
2186 3963 3.181489 CCTCCGTCAGCGAATAAGTACTT 60.181 47.826 13.68 13.68 41.33 2.24
2187 3964 4.025015 TCCGTCAGCGAATAAGTACTTC 57.975 45.455 12.39 0.00 41.33 3.01
2188 3965 3.693085 TCCGTCAGCGAATAAGTACTTCT 59.307 43.478 12.39 0.00 41.33 2.85
2189 3966 4.877823 TCCGTCAGCGAATAAGTACTTCTA 59.122 41.667 12.39 0.00 41.33 2.10
2190 3967 4.968788 CCGTCAGCGAATAAGTACTTCTAC 59.031 45.833 12.39 3.78 41.33 2.59
2191 3968 4.968788 CGTCAGCGAATAAGTACTTCTACC 59.031 45.833 12.39 0.00 41.33 3.18
2192 3969 5.220815 CGTCAGCGAATAAGTACTTCTACCT 60.221 44.000 12.39 0.89 41.33 3.08
2193 3970 6.562518 GTCAGCGAATAAGTACTTCTACCTT 58.437 40.000 12.39 0.00 0.00 3.50
2194 3971 6.472808 GTCAGCGAATAAGTACTTCTACCTTG 59.527 42.308 12.39 6.11 0.00 3.61
2195 3972 6.152323 TCAGCGAATAAGTACTTCTACCTTGT 59.848 38.462 12.39 0.00 0.00 3.16
2196 3973 6.253727 CAGCGAATAAGTACTTCTACCTTGTG 59.746 42.308 12.39 0.00 0.00 3.33
2197 3974 6.071503 AGCGAATAAGTACTTCTACCTTGTGT 60.072 38.462 12.39 0.00 0.00 3.72
2198 3975 6.034683 GCGAATAAGTACTTCTACCTTGTGTG 59.965 42.308 12.39 0.00 0.00 3.82
2199 3976 7.088905 CGAATAAGTACTTCTACCTTGTGTGT 58.911 38.462 12.39 0.00 0.00 3.72
2200 3977 8.239314 CGAATAAGTACTTCTACCTTGTGTGTA 58.761 37.037 12.39 0.00 0.00 2.90
2201 3978 9.918630 GAATAAGTACTTCTACCTTGTGTGTAA 57.081 33.333 12.39 0.00 0.00 2.41
2202 3979 9.924650 AATAAGTACTTCTACCTTGTGTGTAAG 57.075 33.333 12.39 0.00 0.00 2.34
2203 3980 7.592885 AAGTACTTCTACCTTGTGTGTAAGA 57.407 36.000 1.12 0.00 0.00 2.10
2204 3981 7.778185 AGTACTTCTACCTTGTGTGTAAGAT 57.222 36.000 0.00 0.00 0.00 2.40
2205 3982 8.874744 AGTACTTCTACCTTGTGTGTAAGATA 57.125 34.615 0.00 0.00 0.00 1.98
2206 3983 9.305555 AGTACTTCTACCTTGTGTGTAAGATAA 57.694 33.333 0.00 0.00 0.00 1.75
2207 3984 9.918630 GTACTTCTACCTTGTGTGTAAGATAAA 57.081 33.333 0.00 0.00 0.00 1.40
2271 4048 8.942338 TGACATCAGGTTAGTATATTGTGAAC 57.058 34.615 0.00 0.00 0.00 3.18
2272 4049 8.758829 TGACATCAGGTTAGTATATTGTGAACT 58.241 33.333 0.00 0.00 0.00 3.01
2283 4060 8.466617 AGTATATTGTGAACTAATCTCTCCGT 57.533 34.615 0.00 0.00 0.00 4.69
2284 4061 8.569641 AGTATATTGTGAACTAATCTCTCCGTC 58.430 37.037 0.00 0.00 0.00 4.79
2285 4062 4.451629 TTGTGAACTAATCTCTCCGTCC 57.548 45.455 0.00 0.00 0.00 4.79
2286 4063 3.698289 TGTGAACTAATCTCTCCGTCCT 58.302 45.455 0.00 0.00 0.00 3.85
2287 4064 4.851843 TGTGAACTAATCTCTCCGTCCTA 58.148 43.478 0.00 0.00 0.00 2.94
2288 4065 5.446860 TGTGAACTAATCTCTCCGTCCTAT 58.553 41.667 0.00 0.00 0.00 2.57
2289 4066 6.598503 TGTGAACTAATCTCTCCGTCCTATA 58.401 40.000 0.00 0.00 0.00 1.31
2290 4067 7.058525 TGTGAACTAATCTCTCCGTCCTATAA 58.941 38.462 0.00 0.00 0.00 0.98
2291 4068 7.724506 TGTGAACTAATCTCTCCGTCCTATAAT 59.275 37.037 0.00 0.00 0.00 1.28
2292 4069 8.024285 GTGAACTAATCTCTCCGTCCTATAATG 58.976 40.741 0.00 0.00 0.00 1.90
2293 4070 7.724506 TGAACTAATCTCTCCGTCCTATAATGT 59.275 37.037 0.00 0.00 0.00 2.71
2294 4071 9.228949 GAACTAATCTCTCCGTCCTATAATGTA 57.771 37.037 0.00 0.00 0.00 2.29
2295 4072 9.584008 AACTAATCTCTCCGTCCTATAATGTAA 57.416 33.333 0.00 0.00 0.00 2.41
2296 4073 9.233649 ACTAATCTCTCCGTCCTATAATGTAAG 57.766 37.037 0.00 0.00 0.00 2.34
2297 4074 9.451002 CTAATCTCTCCGTCCTATAATGTAAGA 57.549 37.037 0.00 0.00 0.00 2.10
2298 4075 7.690952 ATCTCTCCGTCCTATAATGTAAGAC 57.309 40.000 0.00 0.00 0.00 3.01
2300 4077 5.371526 TCTCCGTCCTATAATGTAAGACGT 58.628 41.667 9.63 0.00 46.62 4.34
2301 4078 5.824624 TCTCCGTCCTATAATGTAAGACGTT 59.175 40.000 9.63 0.00 46.62 3.99
2302 4079 6.319658 TCTCCGTCCTATAATGTAAGACGTTT 59.680 38.462 9.63 0.00 46.62 3.60
2303 4080 6.866480 TCCGTCCTATAATGTAAGACGTTTT 58.134 36.000 9.63 0.00 46.62 2.43
2304 4081 7.322664 TCCGTCCTATAATGTAAGACGTTTTT 58.677 34.615 9.63 0.00 46.62 1.94
2305 4082 8.465999 TCCGTCCTATAATGTAAGACGTTTTTA 58.534 33.333 9.63 0.00 46.62 1.52
2306 4083 9.086336 CCGTCCTATAATGTAAGACGTTTTTAA 57.914 33.333 9.63 0.00 46.62 1.52
2324 4101 8.885108 CGTTTTTAAAACGTCTTACATTGTAGG 58.115 33.333 28.02 0.00 38.69 3.18
2325 4102 9.934190 GTTTTTAAAACGTCTTACATTGTAGGA 57.066 29.630 4.76 4.65 0.00 2.94
2326 4103 9.934190 TTTTTAAAACGTCTTACATTGTAGGAC 57.066 29.630 22.53 22.53 0.00 3.85
2329 4106 3.770263 CGTCTTACATTGTAGGACGGA 57.230 47.619 35.30 13.84 43.69 4.69
2330 4107 3.692576 CGTCTTACATTGTAGGACGGAG 58.307 50.000 35.30 19.28 43.69 4.63
2331 4108 3.488721 CGTCTTACATTGTAGGACGGAGG 60.489 52.174 35.30 19.02 43.69 4.30
2332 4109 3.028850 TCTTACATTGTAGGACGGAGGG 58.971 50.000 4.65 0.00 0.00 4.30
2333 4110 2.832643 TACATTGTAGGACGGAGGGA 57.167 50.000 0.00 0.00 0.00 4.20
2334 4111 1.486211 ACATTGTAGGACGGAGGGAG 58.514 55.000 0.00 0.00 0.00 4.30
2335 4112 1.273098 ACATTGTAGGACGGAGGGAGT 60.273 52.381 0.00 0.00 0.00 3.85
2336 4113 2.024655 ACATTGTAGGACGGAGGGAGTA 60.025 50.000 0.00 0.00 0.00 2.59
2337 4114 2.134789 TTGTAGGACGGAGGGAGTAC 57.865 55.000 0.00 0.00 0.00 2.73
2338 4115 0.994247 TGTAGGACGGAGGGAGTACA 59.006 55.000 0.00 0.00 0.00 2.90
2339 4116 1.567649 TGTAGGACGGAGGGAGTACAT 59.432 52.381 0.00 0.00 0.00 2.29
2340 4117 2.024655 TGTAGGACGGAGGGAGTACATT 60.025 50.000 0.00 0.00 0.00 2.71
2341 4118 2.249309 AGGACGGAGGGAGTACATTT 57.751 50.000 0.00 0.00 0.00 2.32
2342 4119 2.108970 AGGACGGAGGGAGTACATTTC 58.891 52.381 0.00 0.00 0.00 2.17
2343 4120 1.829222 GGACGGAGGGAGTACATTTCA 59.171 52.381 0.00 0.00 0.00 2.69
2344 4121 2.235402 GGACGGAGGGAGTACATTTCAA 59.765 50.000 0.00 0.00 0.00 2.69
2345 4122 3.307199 GGACGGAGGGAGTACATTTCAAA 60.307 47.826 0.00 0.00 0.00 2.69
2346 4123 4.320870 GACGGAGGGAGTACATTTCAAAA 58.679 43.478 0.00 0.00 0.00 2.44
2347 4124 4.070009 ACGGAGGGAGTACATTTCAAAAC 58.930 43.478 0.00 0.00 0.00 2.43
2348 4125 3.124636 CGGAGGGAGTACATTTCAAAACG 59.875 47.826 0.00 0.00 0.00 3.60
2349 4126 4.320870 GGAGGGAGTACATTTCAAAACGA 58.679 43.478 0.00 0.00 0.00 3.85
2350 4127 4.758165 GGAGGGAGTACATTTCAAAACGAA 59.242 41.667 0.00 0.00 0.00 3.85
2351 4128 5.414765 GGAGGGAGTACATTTCAAAACGAAT 59.585 40.000 0.00 0.00 32.32 3.34
2352 4129 6.403309 GGAGGGAGTACATTTCAAAACGAATC 60.403 42.308 0.00 0.00 32.32 2.52
2353 4130 5.414765 AGGGAGTACATTTCAAAACGAATCC 59.585 40.000 0.00 0.00 32.32 3.01
2354 4131 5.182380 GGGAGTACATTTCAAAACGAATCCA 59.818 40.000 0.00 0.00 30.07 3.41
2355 4132 6.314784 GGAGTACATTTCAAAACGAATCCAG 58.685 40.000 0.00 0.00 32.32 3.86
2356 4133 5.699839 AGTACATTTCAAAACGAATCCAGC 58.300 37.500 0.00 0.00 32.32 4.85
2357 4134 3.564511 ACATTTCAAAACGAATCCAGCG 58.435 40.909 0.00 0.00 32.32 5.18
2358 4135 3.252215 ACATTTCAAAACGAATCCAGCGA 59.748 39.130 0.00 0.00 32.32 4.93
2359 4136 4.082787 ACATTTCAAAACGAATCCAGCGAT 60.083 37.500 0.00 0.00 32.32 4.58
2360 4137 5.123186 ACATTTCAAAACGAATCCAGCGATA 59.877 36.000 0.00 0.00 32.32 2.92
2361 4138 4.593597 TTCAAAACGAATCCAGCGATAC 57.406 40.909 0.00 0.00 0.00 2.24
2362 4139 3.857052 TCAAAACGAATCCAGCGATACT 58.143 40.909 0.00 0.00 0.00 2.12
2363 4140 5.001237 TCAAAACGAATCCAGCGATACTA 57.999 39.130 0.00 0.00 0.00 1.82
2364 4141 5.412640 TCAAAACGAATCCAGCGATACTAA 58.587 37.500 0.00 0.00 0.00 2.24
2365 4142 6.046593 TCAAAACGAATCCAGCGATACTAAT 58.953 36.000 0.00 0.00 0.00 1.73
2366 4143 6.537301 TCAAAACGAATCCAGCGATACTAATT 59.463 34.615 0.00 0.00 0.00 1.40
2367 4144 6.920569 AAACGAATCCAGCGATACTAATTT 57.079 33.333 0.00 0.00 0.00 1.82
2368 4145 8.332464 CAAAACGAATCCAGCGATACTAATTTA 58.668 33.333 0.00 0.00 0.00 1.40
2369 4146 7.639162 AACGAATCCAGCGATACTAATTTAG 57.361 36.000 1.79 1.79 0.00 1.85
2370 4147 6.746120 ACGAATCCAGCGATACTAATTTAGT 58.254 36.000 13.36 13.36 42.68 2.24
2371 4148 6.641314 ACGAATCCAGCGATACTAATTTAGTG 59.359 38.462 17.47 4.12 39.81 2.74
2372 4149 6.400091 CGAATCCAGCGATACTAATTTAGTGC 60.400 42.308 17.47 12.68 39.81 4.40
2373 4150 4.628074 TCCAGCGATACTAATTTAGTGCC 58.372 43.478 17.47 8.93 39.81 5.01
2374 4151 4.100344 TCCAGCGATACTAATTTAGTGCCA 59.900 41.667 17.47 0.24 39.81 4.92
2375 4152 4.997395 CCAGCGATACTAATTTAGTGCCAT 59.003 41.667 17.47 4.94 39.81 4.40
2376 4153 6.014925 TCCAGCGATACTAATTTAGTGCCATA 60.015 38.462 17.47 0.00 39.81 2.74
2377 4154 6.649141 CCAGCGATACTAATTTAGTGCCATAA 59.351 38.462 17.47 0.00 39.81 1.90
2378 4155 7.172532 CCAGCGATACTAATTTAGTGCCATAAA 59.827 37.037 17.47 0.00 39.81 1.40
2379 4156 8.721478 CAGCGATACTAATTTAGTGCCATAAAT 58.279 33.333 17.47 2.98 39.81 1.40
2380 4157 9.938280 AGCGATACTAATTTAGTGCCATAAATA 57.062 29.630 17.47 0.00 39.81 1.40
2394 4171 9.889128 AGTGCCATAAATAATGTTGCTATTTTT 57.111 25.926 0.00 0.00 32.54 1.94
2452 4229 8.628882 AAAACAAAAGTTAGATGTACACTTGC 57.371 30.769 0.00 0.00 31.00 4.01
2453 4230 5.985781 ACAAAAGTTAGATGTACACTTGCG 58.014 37.500 0.00 0.00 31.00 4.85
2454 4231 5.756347 ACAAAAGTTAGATGTACACTTGCGA 59.244 36.000 0.00 0.00 31.00 5.10
2455 4232 6.259167 ACAAAAGTTAGATGTACACTTGCGAA 59.741 34.615 0.00 0.00 31.00 4.70
2456 4233 6.467723 AAAGTTAGATGTACACTTGCGAAG 57.532 37.500 0.00 0.00 31.00 3.79
2457 4234 4.495422 AGTTAGATGTACACTTGCGAAGG 58.505 43.478 0.00 0.00 0.00 3.46
2458 4235 2.386661 AGATGTACACTTGCGAAGGG 57.613 50.000 0.00 0.00 38.11 3.95
2459 4236 1.899814 AGATGTACACTTGCGAAGGGA 59.100 47.619 0.00 0.00 35.35 4.20
2460 4237 2.093973 AGATGTACACTTGCGAAGGGAG 60.094 50.000 0.00 0.00 35.35 4.30
2501 4278 6.841443 TGTTGACTGCAAATTACATTTTGG 57.159 33.333 0.00 0.00 37.13 3.28
2514 4292 4.946160 ACATTTTGGAAGGTGAGGGATA 57.054 40.909 0.00 0.00 0.00 2.59
2561 4339 0.602638 AAGCTCGCACGAAACATGGA 60.603 50.000 0.00 0.00 0.00 3.41
2563 4341 1.565156 GCTCGCACGAAACATGGACA 61.565 55.000 0.00 0.00 0.00 4.02
2652 4432 7.814107 ACGGACGTATAGTTCATTTGTTCTTTA 59.186 33.333 0.00 0.00 0.00 1.85
2662 4442 5.780984 TCATTTGTTCTTTACATGCATGCA 58.219 33.333 26.53 25.04 36.44 3.96
2680 4464 1.964373 ATGCAAACGTGGTCGGTCC 60.964 57.895 0.00 0.00 41.85 4.46
2681 4465 3.708734 GCAAACGTGGTCGGTCCG 61.709 66.667 4.39 4.39 41.85 4.79
2713 4656 1.502231 CGCTACATACATCAGCACCC 58.498 55.000 0.00 0.00 34.94 4.61
2792 4736 1.651240 CTCGTCAGGGGCATTGCTTG 61.651 60.000 8.82 5.44 0.00 4.01
2808 4752 3.847671 GCTTGGTCTATAAGCCTCCTT 57.152 47.619 0.00 0.00 43.57 3.36
2809 4753 4.157849 GCTTGGTCTATAAGCCTCCTTT 57.842 45.455 0.00 0.00 43.57 3.11
2810 4754 3.879892 GCTTGGTCTATAAGCCTCCTTTG 59.120 47.826 0.00 0.00 43.57 2.77
2811 4755 4.455606 CTTGGTCTATAAGCCTCCTTTGG 58.544 47.826 0.00 0.00 32.47 3.28
2812 4756 3.460825 TGGTCTATAAGCCTCCTTTGGT 58.539 45.455 0.00 0.00 32.47 3.67
2813 4757 3.850173 TGGTCTATAAGCCTCCTTTGGTT 59.150 43.478 0.00 0.00 32.47 3.67
2814 4758 4.291249 TGGTCTATAAGCCTCCTTTGGTTT 59.709 41.667 0.00 0.00 34.87 3.27
2815 4759 4.640647 GGTCTATAAGCCTCCTTTGGTTTG 59.359 45.833 0.00 0.00 32.78 2.93
2816 4760 4.640647 GTCTATAAGCCTCCTTTGGTTTGG 59.359 45.833 0.00 0.00 32.78 3.28
2817 4761 3.542969 ATAAGCCTCCTTTGGTTTGGT 57.457 42.857 0.00 0.00 32.78 3.67
2818 4762 2.174685 AAGCCTCCTTTGGTTTGGTT 57.825 45.000 0.00 0.00 0.00 3.67
2819 4763 2.174685 AGCCTCCTTTGGTTTGGTTT 57.825 45.000 0.00 0.00 0.00 3.27
2820 4764 1.762370 AGCCTCCTTTGGTTTGGTTTG 59.238 47.619 0.00 0.00 0.00 2.93
2821 4765 1.484653 GCCTCCTTTGGTTTGGTTTGT 59.515 47.619 0.00 0.00 0.00 2.83
2822 4766 2.696187 GCCTCCTTTGGTTTGGTTTGTA 59.304 45.455 0.00 0.00 0.00 2.41
2823 4767 3.243737 GCCTCCTTTGGTTTGGTTTGTAG 60.244 47.826 0.00 0.00 0.00 2.74
2824 4768 3.320826 CCTCCTTTGGTTTGGTTTGTAGG 59.679 47.826 0.00 0.00 0.00 3.18
2825 4769 4.211920 CTCCTTTGGTTTGGTTTGTAGGA 58.788 43.478 0.00 0.00 0.00 2.94
2826 4770 4.810345 TCCTTTGGTTTGGTTTGTAGGAT 58.190 39.130 0.00 0.00 0.00 3.24
2827 4771 5.212745 TCCTTTGGTTTGGTTTGTAGGATT 58.787 37.500 0.00 0.00 0.00 3.01
2828 4772 5.663556 TCCTTTGGTTTGGTTTGTAGGATTT 59.336 36.000 0.00 0.00 0.00 2.17
2829 4773 6.157123 TCCTTTGGTTTGGTTTGTAGGATTTT 59.843 34.615 0.00 0.00 0.00 1.82
2830 4774 6.826231 CCTTTGGTTTGGTTTGTAGGATTTTT 59.174 34.615 0.00 0.00 0.00 1.94
2831 4775 7.201688 CCTTTGGTTTGGTTTGTAGGATTTTTG 60.202 37.037 0.00 0.00 0.00 2.44
2832 4776 6.301169 TGGTTTGGTTTGTAGGATTTTTGT 57.699 33.333 0.00 0.00 0.00 2.83
2833 4777 7.419711 TGGTTTGGTTTGTAGGATTTTTGTA 57.580 32.000 0.00 0.00 0.00 2.41
2834 4778 7.493367 TGGTTTGGTTTGTAGGATTTTTGTAG 58.507 34.615 0.00 0.00 0.00 2.74
2835 4779 6.926826 GGTTTGGTTTGTAGGATTTTTGTAGG 59.073 38.462 0.00 0.00 0.00 3.18
2836 4780 7.201929 GGTTTGGTTTGTAGGATTTTTGTAGGA 60.202 37.037 0.00 0.00 0.00 2.94
2837 4781 7.899648 TTGGTTTGTAGGATTTTTGTAGGAA 57.100 32.000 0.00 0.00 0.00 3.36
2838 4782 8.485578 TTGGTTTGTAGGATTTTTGTAGGAAT 57.514 30.769 0.00 0.00 0.00 3.01
2839 4783 8.485578 TGGTTTGTAGGATTTTTGTAGGAATT 57.514 30.769 0.00 0.00 0.00 2.17
2840 4784 8.581578 TGGTTTGTAGGATTTTTGTAGGAATTC 58.418 33.333 0.00 0.00 0.00 2.17
2841 4785 8.803235 GGTTTGTAGGATTTTTGTAGGAATTCT 58.197 33.333 5.23 0.00 0.00 2.40
2881 4825 8.835439 TGCAAAGGAAAAATTTATTTGAAGTCC 58.165 29.630 16.19 0.00 32.75 3.85
2882 4826 9.056005 GCAAAGGAAAAATTTATTTGAAGTCCT 57.944 29.630 16.19 1.70 32.75 3.85
2886 4830 9.559732 AGGAAAAATTTATTTGAAGTCCTTTGG 57.440 29.630 0.00 0.00 30.16 3.28
2887 4831 9.337396 GGAAAAATTTATTTGAAGTCCTTTGGT 57.663 29.630 0.00 0.00 0.00 3.67
2891 4835 9.679661 AAATTTATTTGAAGTCCTTTGGTTTGT 57.320 25.926 0.00 0.00 0.00 2.83
2893 4837 9.981114 ATTTATTTGAAGTCCTTTGGTTTGTAG 57.019 29.630 0.00 0.00 0.00 2.74
2894 4838 5.845391 TTTGAAGTCCTTTGGTTTGTAGG 57.155 39.130 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.106673 GGACCTAACCGAACTCTTGAATTTG 60.107 44.000 0.00 0.00 0.00 2.32
25 26 5.001874 GGACCTAACCGAACTCTTGAATTT 58.998 41.667 0.00 0.00 0.00 1.82
27 28 4.203654 GGACCTAACCGAACTCTTGAAT 57.796 45.455 0.00 0.00 0.00 2.57
28 29 3.672767 GGACCTAACCGAACTCTTGAA 57.327 47.619 0.00 0.00 0.00 2.69
41 42 1.205417 CTAAGTTTCGGCCGGACCTAA 59.795 52.381 27.83 9.02 35.61 2.69
50 51 8.448615 AGTAAATTTACATCACTAAGTTTCGGC 58.551 33.333 26.06 0.00 36.12 5.54
69 70 9.110502 GCCAAGTTAGCTATAGTGAAGTAAATT 57.889 33.333 0.84 0.00 0.00 1.82
77 78 2.693591 AGCGCCAAGTTAGCTATAGTGA 59.306 45.455 2.29 0.00 39.74 3.41
92 93 3.343941 AAATAGTGGAGTAAAGCGCCA 57.656 42.857 2.29 0.00 44.92 5.69
96 97 6.420638 TCCCCTAAAAATAGTGGAGTAAAGC 58.579 40.000 0.00 0.00 0.00 3.51
97 98 7.441458 CGATCCCCTAAAAATAGTGGAGTAAAG 59.559 40.741 0.00 0.00 27.38 1.85
154 156 2.928116 CGACGGATGGGAGTTTAGTTTC 59.072 50.000 0.00 0.00 0.00 2.78
215 217 5.406175 CCAAAATGCAAATGTGACCAAGTAG 59.594 40.000 0.00 0.00 0.00 2.57
216 218 5.069648 TCCAAAATGCAAATGTGACCAAGTA 59.930 36.000 0.00 0.00 0.00 2.24
217 219 4.128643 CCAAAATGCAAATGTGACCAAGT 58.871 39.130 0.00 0.00 0.00 3.16
335 337 7.453393 ACCATCTATTGACGTATCCATCATTT 58.547 34.615 0.00 0.00 0.00 2.32
370 372 1.546323 CCTATGGCCCTTGCATCGATT 60.546 52.381 0.00 0.00 40.13 3.34
373 375 0.466189 AACCTATGGCCCTTGCATCG 60.466 55.000 0.00 0.00 40.13 3.84
378 380 2.550208 GGACGATAACCTATGGCCCTTG 60.550 54.545 0.00 0.00 0.00 3.61
379 381 1.697982 GGACGATAACCTATGGCCCTT 59.302 52.381 0.00 0.00 0.00 3.95
437 439 8.748412 CAATCCACAAGGTATCAAGGATTTAAA 58.252 33.333 0.00 0.00 42.29 1.52
455 457 6.538742 GTCTAAACTAAGCTATGCAATCCACA 59.461 38.462 0.00 0.00 0.00 4.17
462 464 5.289595 CCATCGTCTAAACTAAGCTATGCA 58.710 41.667 0.00 0.00 0.00 3.96
473 475 0.108520 TGTCCCGCCATCGTCTAAAC 60.109 55.000 0.00 0.00 0.00 2.01
499 501 7.562454 AGAAGTTCAAGATTAACGAAACCAA 57.438 32.000 5.50 0.00 32.00 3.67
557 563 9.550406 TCTACTAGCTACAGATTAGAGTTCTTC 57.450 37.037 0.00 0.00 0.00 2.87
560 566 7.439056 ACGTCTACTAGCTACAGATTAGAGTTC 59.561 40.741 4.10 0.00 0.00 3.01
572 580 4.034975 CCAGGTACAACGTCTACTAGCTAC 59.965 50.000 0.00 0.00 0.00 3.58
653 661 6.514541 CGAGAAGAGAAACACCAAGTACTACA 60.515 42.308 0.00 0.00 0.00 2.74
656 664 4.583489 TCGAGAAGAGAAACACCAAGTACT 59.417 41.667 0.00 0.00 0.00 2.73
747 794 2.012414 TCGTCGTGGAAGTTTCGCG 61.012 57.895 10.97 10.97 0.00 5.87
769 816 4.065088 TGGTACAAGATGAAAGCACAGTC 58.935 43.478 0.00 0.00 31.92 3.51
782 833 4.588951 ACTCTTCATGTGAGTGGTACAAGA 59.411 41.667 18.27 5.10 44.16 3.02
784 835 4.955811 ACTCTTCATGTGAGTGGTACAA 57.044 40.909 18.27 0.00 44.16 2.41
812 876 5.368816 TCCTACTAGCTGGTCTACATGTCTA 59.631 44.000 5.78 0.00 0.00 2.59
825 889 7.721402 AGTGATGATTAGTTTCCTACTAGCTG 58.279 38.462 0.00 0.00 40.35 4.24
855 919 3.572584 ACGTGTATGACTTTCGGACTTC 58.427 45.455 0.00 0.00 0.00 3.01
861 925 6.253013 TGTACTGATACGTGTATGACTTTCG 58.747 40.000 0.00 0.00 33.60 3.46
871 935 4.521639 TCCACTTCTTGTACTGATACGTGT 59.478 41.667 0.00 0.00 33.60 4.49
875 939 9.303537 GTCTTAATCCACTTCTTGTACTGATAC 57.696 37.037 0.00 0.00 0.00 2.24
876 940 9.031537 TGTCTTAATCCACTTCTTGTACTGATA 57.968 33.333 0.00 0.00 0.00 2.15
877 941 7.907389 TGTCTTAATCCACTTCTTGTACTGAT 58.093 34.615 0.00 0.00 0.00 2.90
878 942 7.297936 TGTCTTAATCCACTTCTTGTACTGA 57.702 36.000 0.00 0.00 0.00 3.41
894 959 3.251571 GCTTCTCGACCGTTGTCTTAAT 58.748 45.455 0.00 0.00 39.47 1.40
899 964 1.737008 GGGCTTCTCGACCGTTGTC 60.737 63.158 0.00 0.00 38.18 3.18
915 980 1.069227 GCAAGTCGCTACTGTTTTGGG 60.069 52.381 0.00 0.00 35.62 4.12
1016 1106 4.787551 TGTTGATGTATAACCATGGACCC 58.212 43.478 21.47 1.68 0.00 4.46
1017 1107 4.275936 GCTGTTGATGTATAACCATGGACC 59.724 45.833 21.47 1.30 0.00 4.46
1026 1116 4.635765 GGAAGCTGTGCTGTTGATGTATAA 59.364 41.667 0.00 0.00 39.62 0.98
1049 1145 4.634004 TGGAGATGGCGTTGTAAATTACAG 59.366 41.667 5.94 0.00 40.24 2.74
1050 1146 4.393680 GTGGAGATGGCGTTGTAAATTACA 59.606 41.667 1.08 1.08 36.79 2.41
1093 1192 5.779922 CTGGCACTTACAGAGTTACAGTAA 58.220 41.667 0.00 0.00 38.20 2.24
1130 1229 2.511373 CTCGCGGCTTGGCACATA 60.511 61.111 6.13 0.00 39.30 2.29
1167 1266 1.079405 ATGAAACCGACGCGACCAT 60.079 52.632 15.93 1.81 0.00 3.55
1181 1280 2.884012 GAGCGAGATCAGGAGAGATGAA 59.116 50.000 0.00 0.00 0.00 2.57
1409 1514 4.379143 TCGTCGTCGTCACTGCCG 62.379 66.667 1.33 0.00 38.33 5.69
1451 1562 4.240103 CCCATCGCCTCGCATCCA 62.240 66.667 0.00 0.00 0.00 3.41
1535 1646 3.980989 CCGTCCCGGTCGAACACA 61.981 66.667 16.04 0.00 42.73 3.72
1752 1870 2.616969 AGTGCACCACTGTTTAGCG 58.383 52.632 14.63 0.00 43.63 4.26
1798 1916 9.090692 GAAACAATGAAAAATATGGACATGAGG 57.909 33.333 0.00 0.00 0.00 3.86
1946 2094 1.978617 CTTGGGCCGTGCATTTCCT 60.979 57.895 0.00 0.00 0.00 3.36
1960 2108 0.751277 TGGTCAAGGCACACACTTGG 60.751 55.000 5.46 0.00 44.13 3.61
1964 2121 1.961793 TACTTGGTCAAGGCACACAC 58.038 50.000 14.29 0.00 42.53 3.82
2051 2213 1.248101 TGCACGGTGCTAGTCTGCTA 61.248 55.000 30.81 7.26 45.31 3.49
2052 2214 1.892819 ATGCACGGTGCTAGTCTGCT 61.893 55.000 30.81 5.64 45.31 4.24
2053 2215 1.424493 GATGCACGGTGCTAGTCTGC 61.424 60.000 30.81 10.66 45.31 4.26
2054 2216 1.142185 CGATGCACGGTGCTAGTCTG 61.142 60.000 30.81 17.64 45.31 3.51
2055 2217 1.139734 CGATGCACGGTGCTAGTCT 59.860 57.895 30.81 12.43 45.31 3.24
2056 2218 0.867753 CTCGATGCACGGTGCTAGTC 60.868 60.000 30.81 23.24 45.31 2.59
2057 2219 1.139734 CTCGATGCACGGTGCTAGT 59.860 57.895 30.81 18.15 45.31 2.57
2058 2220 1.139734 ACTCGATGCACGGTGCTAG 59.860 57.895 30.81 23.13 45.31 3.42
2151 3928 1.153549 CGGAGGGAGTACTTGCTGC 60.154 63.158 0.00 0.00 0.00 5.25
2159 3936 0.395311 ATTCGCTGACGGAGGGAGTA 60.395 55.000 4.12 0.00 44.01 2.59
2160 3937 0.395311 TATTCGCTGACGGAGGGAGT 60.395 55.000 4.12 4.41 44.01 3.85
2161 3938 0.744874 TTATTCGCTGACGGAGGGAG 59.255 55.000 4.12 0.00 44.01 4.30
2162 3939 0.744874 CTTATTCGCTGACGGAGGGA 59.255 55.000 0.06 0.06 41.73 4.20
2163 3940 0.460311 ACTTATTCGCTGACGGAGGG 59.540 55.000 0.00 0.00 40.63 4.30
2164 3941 2.358267 AGTACTTATTCGCTGACGGAGG 59.642 50.000 0.00 0.00 40.63 4.30
2165 3942 3.694535 AGTACTTATTCGCTGACGGAG 57.305 47.619 0.00 0.00 40.63 4.63
2166 3943 3.693085 AGAAGTACTTATTCGCTGACGGA 59.307 43.478 8.42 0.00 40.63 4.69
2167 3944 4.030134 AGAAGTACTTATTCGCTGACGG 57.970 45.455 8.42 0.00 40.63 4.79
2168 3945 4.968788 GGTAGAAGTACTTATTCGCTGACG 59.031 45.833 8.42 0.00 42.01 4.35
2169 3946 6.134040 AGGTAGAAGTACTTATTCGCTGAC 57.866 41.667 8.42 0.00 0.00 3.51
2170 3947 6.152323 ACAAGGTAGAAGTACTTATTCGCTGA 59.848 38.462 8.42 0.00 0.00 4.26
2171 3948 6.253727 CACAAGGTAGAAGTACTTATTCGCTG 59.746 42.308 8.42 6.68 0.00 5.18
2172 3949 6.071503 ACACAAGGTAGAAGTACTTATTCGCT 60.072 38.462 8.42 3.55 0.00 4.93
2173 3950 6.034683 CACACAAGGTAGAAGTACTTATTCGC 59.965 42.308 8.42 0.00 0.00 4.70
2174 3951 7.088905 ACACACAAGGTAGAAGTACTTATTCG 58.911 38.462 8.42 0.00 0.00 3.34
2175 3952 9.918630 TTACACACAAGGTAGAAGTACTTATTC 57.081 33.333 8.42 2.97 0.00 1.75
2176 3953 9.924650 CTTACACACAAGGTAGAAGTACTTATT 57.075 33.333 8.42 2.71 0.00 1.40
2177 3954 9.305555 TCTTACACACAAGGTAGAAGTACTTAT 57.694 33.333 8.42 8.21 0.00 1.73
2178 3955 8.696043 TCTTACACACAAGGTAGAAGTACTTA 57.304 34.615 8.42 0.00 0.00 2.24
2179 3956 7.592885 TCTTACACACAAGGTAGAAGTACTT 57.407 36.000 8.13 8.13 0.00 2.24
2180 3957 7.778185 ATCTTACACACAAGGTAGAAGTACT 57.222 36.000 0.00 0.00 0.00 2.73
2181 3958 9.918630 TTTATCTTACACACAAGGTAGAAGTAC 57.081 33.333 0.00 0.00 0.00 2.73
2245 4022 9.547753 GTTCACAATATACTAACCTGATGTCAT 57.452 33.333 0.00 0.00 0.00 3.06
2246 4023 8.758829 AGTTCACAATATACTAACCTGATGTCA 58.241 33.333 0.00 0.00 0.00 3.58
2257 4034 9.570468 ACGGAGAGATTAGTTCACAATATACTA 57.430 33.333 0.00 0.00 0.00 1.82
2258 4035 8.466617 ACGGAGAGATTAGTTCACAATATACT 57.533 34.615 0.00 0.00 0.00 2.12
2259 4036 7.808856 GGACGGAGAGATTAGTTCACAATATAC 59.191 40.741 0.00 0.00 0.00 1.47
2260 4037 7.724506 AGGACGGAGAGATTAGTTCACAATATA 59.275 37.037 0.00 0.00 0.00 0.86
2261 4038 6.551601 AGGACGGAGAGATTAGTTCACAATAT 59.448 38.462 0.00 0.00 0.00 1.28
2262 4039 5.892119 AGGACGGAGAGATTAGTTCACAATA 59.108 40.000 0.00 0.00 0.00 1.90
2263 4040 4.712337 AGGACGGAGAGATTAGTTCACAAT 59.288 41.667 0.00 0.00 0.00 2.71
2264 4041 4.087182 AGGACGGAGAGATTAGTTCACAA 58.913 43.478 0.00 0.00 0.00 3.33
2265 4042 3.698289 AGGACGGAGAGATTAGTTCACA 58.302 45.455 0.00 0.00 0.00 3.58
2266 4043 7.507733 TTATAGGACGGAGAGATTAGTTCAC 57.492 40.000 0.00 0.00 0.00 3.18
2267 4044 7.724506 ACATTATAGGACGGAGAGATTAGTTCA 59.275 37.037 0.00 0.00 0.00 3.18
2268 4045 8.113173 ACATTATAGGACGGAGAGATTAGTTC 57.887 38.462 0.00 0.00 0.00 3.01
2269 4046 9.584008 TTACATTATAGGACGGAGAGATTAGTT 57.416 33.333 0.00 0.00 0.00 2.24
2270 4047 9.233649 CTTACATTATAGGACGGAGAGATTAGT 57.766 37.037 0.00 0.00 0.00 2.24
2271 4048 9.451002 TCTTACATTATAGGACGGAGAGATTAG 57.549 37.037 0.00 0.00 0.00 1.73
2272 4049 9.228949 GTCTTACATTATAGGACGGAGAGATTA 57.771 37.037 0.00 0.00 0.00 1.75
2273 4050 7.094720 CGTCTTACATTATAGGACGGAGAGATT 60.095 40.741 9.88 0.00 43.69 2.40
2274 4051 6.372103 CGTCTTACATTATAGGACGGAGAGAT 59.628 42.308 9.88 0.00 43.69 2.75
2275 4052 5.699915 CGTCTTACATTATAGGACGGAGAGA 59.300 44.000 9.88 0.00 43.69 3.10
2276 4053 5.929278 CGTCTTACATTATAGGACGGAGAG 58.071 45.833 9.88 0.00 43.69 3.20
2277 4054 5.936686 CGTCTTACATTATAGGACGGAGA 57.063 43.478 9.88 0.00 43.69 3.71
2299 4076 9.934190 TCCTACAATGTAAGACGTTTTAAAAAC 57.066 29.630 1.31 0.00 0.00 2.43
2300 4077 9.934190 GTCCTACAATGTAAGACGTTTTAAAAA 57.066 29.630 6.42 0.00 0.00 1.94
2301 4078 8.274939 CGTCCTACAATGTAAGACGTTTTAAAA 58.725 33.333 27.10 0.00 43.89 1.52
2302 4079 7.095691 CCGTCCTACAATGTAAGACGTTTTAAA 60.096 37.037 30.45 0.00 46.62 1.52
2303 4080 6.365789 CCGTCCTACAATGTAAGACGTTTTAA 59.634 38.462 30.45 0.00 46.62 1.52
2304 4081 5.863397 CCGTCCTACAATGTAAGACGTTTTA 59.137 40.000 30.45 0.00 46.62 1.52
2305 4082 4.687483 CCGTCCTACAATGTAAGACGTTTT 59.313 41.667 30.45 0.00 46.62 2.43
2306 4083 4.022068 TCCGTCCTACAATGTAAGACGTTT 60.022 41.667 30.45 0.00 46.62 3.60
2307 4084 3.507233 TCCGTCCTACAATGTAAGACGTT 59.493 43.478 30.45 0.00 46.62 3.99
2308 4085 3.084039 TCCGTCCTACAATGTAAGACGT 58.916 45.455 30.45 0.00 46.62 4.34
2310 4087 3.181478 CCCTCCGTCCTACAATGTAAGAC 60.181 52.174 11.14 11.14 0.00 3.01
2311 4088 3.028850 CCCTCCGTCCTACAATGTAAGA 58.971 50.000 0.00 0.00 0.00 2.10
2312 4089 3.028850 TCCCTCCGTCCTACAATGTAAG 58.971 50.000 0.00 0.00 0.00 2.34
2313 4090 3.028850 CTCCCTCCGTCCTACAATGTAA 58.971 50.000 0.00 0.00 0.00 2.41
2314 4091 2.024655 ACTCCCTCCGTCCTACAATGTA 60.025 50.000 0.00 0.00 0.00 2.29
2315 4092 1.273098 ACTCCCTCCGTCCTACAATGT 60.273 52.381 0.00 0.00 0.00 2.71
2316 4093 1.486211 ACTCCCTCCGTCCTACAATG 58.514 55.000 0.00 0.00 0.00 2.82
2317 4094 2.024655 TGTACTCCCTCCGTCCTACAAT 60.025 50.000 0.00 0.00 0.00 2.71
2318 4095 1.355381 TGTACTCCCTCCGTCCTACAA 59.645 52.381 0.00 0.00 0.00 2.41
2319 4096 0.994247 TGTACTCCCTCCGTCCTACA 59.006 55.000 0.00 0.00 0.00 2.74
2320 4097 2.361643 ATGTACTCCCTCCGTCCTAC 57.638 55.000 0.00 0.00 0.00 3.18
2321 4098 3.294214 GAAATGTACTCCCTCCGTCCTA 58.706 50.000 0.00 0.00 0.00 2.94
2322 4099 2.108970 GAAATGTACTCCCTCCGTCCT 58.891 52.381 0.00 0.00 0.00 3.85
2323 4100 1.829222 TGAAATGTACTCCCTCCGTCC 59.171 52.381 0.00 0.00 0.00 4.79
2324 4101 3.604875 TTGAAATGTACTCCCTCCGTC 57.395 47.619 0.00 0.00 0.00 4.79
2325 4102 4.070009 GTTTTGAAATGTACTCCCTCCGT 58.930 43.478 0.00 0.00 0.00 4.69
2326 4103 3.124636 CGTTTTGAAATGTACTCCCTCCG 59.875 47.826 0.00 0.00 0.00 4.63
2327 4104 4.320870 TCGTTTTGAAATGTACTCCCTCC 58.679 43.478 0.00 0.00 0.00 4.30
2328 4105 5.934935 TTCGTTTTGAAATGTACTCCCTC 57.065 39.130 0.00 0.00 32.37 4.30
2329 4106 5.414765 GGATTCGTTTTGAAATGTACTCCCT 59.585 40.000 0.00 0.00 40.71 4.20
2330 4107 5.182380 TGGATTCGTTTTGAAATGTACTCCC 59.818 40.000 0.00 0.00 40.71 4.30
2331 4108 6.249035 TGGATTCGTTTTGAAATGTACTCC 57.751 37.500 0.00 0.00 40.71 3.85
2332 4109 5.795441 GCTGGATTCGTTTTGAAATGTACTC 59.205 40.000 0.00 0.00 40.71 2.59
2333 4110 5.616866 CGCTGGATTCGTTTTGAAATGTACT 60.617 40.000 0.00 0.00 40.71 2.73
2334 4111 4.553429 CGCTGGATTCGTTTTGAAATGTAC 59.447 41.667 0.00 0.00 40.71 2.90
2335 4112 4.452795 TCGCTGGATTCGTTTTGAAATGTA 59.547 37.500 0.00 0.00 40.71 2.29
2336 4113 3.252215 TCGCTGGATTCGTTTTGAAATGT 59.748 39.130 0.00 0.00 40.71 2.71
2337 4114 3.820689 TCGCTGGATTCGTTTTGAAATG 58.179 40.909 0.00 0.00 40.71 2.32
2338 4115 4.701956 ATCGCTGGATTCGTTTTGAAAT 57.298 36.364 0.00 0.00 40.71 2.17
2339 4116 4.693566 AGTATCGCTGGATTCGTTTTGAAA 59.306 37.500 0.00 0.00 40.71 2.69
2340 4117 4.250464 AGTATCGCTGGATTCGTTTTGAA 58.750 39.130 0.00 0.00 41.81 2.69
2341 4118 3.857052 AGTATCGCTGGATTCGTTTTGA 58.143 40.909 0.00 0.00 34.00 2.69
2342 4119 5.712217 TTAGTATCGCTGGATTCGTTTTG 57.288 39.130 0.00 0.00 34.00 2.44
2343 4120 6.920569 AATTAGTATCGCTGGATTCGTTTT 57.079 33.333 0.00 0.00 34.00 2.43
2344 4121 6.920569 AAATTAGTATCGCTGGATTCGTTT 57.079 33.333 0.00 0.00 34.00 3.60
2345 4122 7.169308 CACTAAATTAGTATCGCTGGATTCGTT 59.831 37.037 5.23 0.00 37.23 3.85
2346 4123 6.641314 CACTAAATTAGTATCGCTGGATTCGT 59.359 38.462 5.23 0.00 37.23 3.85
2347 4124 6.400091 GCACTAAATTAGTATCGCTGGATTCG 60.400 42.308 5.23 0.00 37.23 3.34
2348 4125 6.128526 GGCACTAAATTAGTATCGCTGGATTC 60.129 42.308 5.23 0.00 37.23 2.52
2349 4126 5.701290 GGCACTAAATTAGTATCGCTGGATT 59.299 40.000 5.23 0.00 37.23 3.01
2350 4127 5.221641 TGGCACTAAATTAGTATCGCTGGAT 60.222 40.000 5.23 0.00 37.23 3.41
2351 4128 4.100344 TGGCACTAAATTAGTATCGCTGGA 59.900 41.667 5.23 0.00 37.23 3.86
2352 4129 4.377021 TGGCACTAAATTAGTATCGCTGG 58.623 43.478 5.23 0.00 37.23 4.85
2353 4130 7.652300 TTATGGCACTAAATTAGTATCGCTG 57.348 36.000 5.23 0.00 37.23 5.18
2354 4131 8.848474 ATTTATGGCACTAAATTAGTATCGCT 57.152 30.769 5.23 0.00 37.23 4.93
2368 4145 9.889128 AAAAATAGCAACATTATTTATGGCACT 57.111 25.926 0.00 0.00 38.64 4.40
2426 4203 9.724839 GCAAGTGTACATCTAACTTTTGTTTTA 57.275 29.630 0.00 0.00 43.32 1.52
2427 4204 7.431084 CGCAAGTGTACATCTAACTTTTGTTTT 59.569 33.333 0.00 0.00 43.32 2.43
2428 4205 6.910433 CGCAAGTGTACATCTAACTTTTGTTT 59.090 34.615 0.00 0.00 43.32 2.83
2429 4206 6.259167 TCGCAAGTGTACATCTAACTTTTGTT 59.741 34.615 0.00 0.00 41.96 2.83
2430 4207 5.756347 TCGCAAGTGTACATCTAACTTTTGT 59.244 36.000 0.00 0.00 31.88 2.83
2431 4208 6.223138 TCGCAAGTGTACATCTAACTTTTG 57.777 37.500 0.00 0.00 31.88 2.44
2432 4209 6.073222 CCTTCGCAAGTGTACATCTAACTTTT 60.073 38.462 0.00 0.00 31.88 2.27
2433 4210 5.408604 CCTTCGCAAGTGTACATCTAACTTT 59.591 40.000 0.00 0.00 31.88 2.66
2434 4211 4.929808 CCTTCGCAAGTGTACATCTAACTT 59.070 41.667 0.00 0.00 34.52 2.66
2435 4212 4.495422 CCTTCGCAAGTGTACATCTAACT 58.505 43.478 0.00 0.00 39.48 2.24
2436 4213 3.617263 CCCTTCGCAAGTGTACATCTAAC 59.383 47.826 0.00 0.00 39.48 2.34
2437 4214 3.512329 TCCCTTCGCAAGTGTACATCTAA 59.488 43.478 0.00 0.00 39.48 2.10
2438 4215 3.093814 TCCCTTCGCAAGTGTACATCTA 58.906 45.455 0.00 0.00 39.48 1.98
2439 4216 1.899814 TCCCTTCGCAAGTGTACATCT 59.100 47.619 0.00 0.00 39.48 2.90
2440 4217 2.271800 CTCCCTTCGCAAGTGTACATC 58.728 52.381 0.00 0.00 39.48 3.06
2441 4218 1.623811 ACTCCCTTCGCAAGTGTACAT 59.376 47.619 0.00 0.00 39.48 2.29
2442 4219 1.045407 ACTCCCTTCGCAAGTGTACA 58.955 50.000 0.00 0.00 39.48 2.90
2443 4220 2.230750 AGTACTCCCTTCGCAAGTGTAC 59.769 50.000 0.00 0.00 39.48 2.90
2444 4221 2.230508 CAGTACTCCCTTCGCAAGTGTA 59.769 50.000 0.00 0.00 39.48 2.90
2445 4222 1.000955 CAGTACTCCCTTCGCAAGTGT 59.999 52.381 0.00 0.00 39.48 3.55
2446 4223 1.673033 CCAGTACTCCCTTCGCAAGTG 60.673 57.143 0.00 0.00 39.48 3.16
2447 4224 0.608640 CCAGTACTCCCTTCGCAAGT 59.391 55.000 0.00 0.00 39.48 3.16
2448 4225 0.741221 GCCAGTACTCCCTTCGCAAG 60.741 60.000 0.00 0.00 0.00 4.01
2449 4226 1.295423 GCCAGTACTCCCTTCGCAA 59.705 57.895 0.00 0.00 0.00 4.85
2450 4227 2.656069 GGCCAGTACTCCCTTCGCA 61.656 63.158 0.00 0.00 0.00 5.10
2451 4228 2.187163 GGCCAGTACTCCCTTCGC 59.813 66.667 0.00 0.00 0.00 4.70
2452 4229 0.970937 TCTGGCCAGTACTCCCTTCG 60.971 60.000 31.58 3.01 0.00 3.79
2453 4230 1.066071 GTTCTGGCCAGTACTCCCTTC 60.066 57.143 31.58 5.40 0.00 3.46
2454 4231 0.984995 GTTCTGGCCAGTACTCCCTT 59.015 55.000 31.58 0.00 0.00 3.95
2455 4232 0.178903 TGTTCTGGCCAGTACTCCCT 60.179 55.000 33.99 0.00 31.14 4.20
2456 4233 0.690762 TTGTTCTGGCCAGTACTCCC 59.309 55.000 33.99 15.44 31.14 4.30
2457 4234 2.561478 TTTGTTCTGGCCAGTACTCC 57.439 50.000 33.99 19.00 31.14 3.85
2458 4235 3.821033 ACATTTTGTTCTGGCCAGTACTC 59.179 43.478 33.99 21.87 31.14 2.59
2459 4236 3.832527 ACATTTTGTTCTGGCCAGTACT 58.167 40.909 33.99 17.56 31.14 2.73
2460 4237 4.037446 TCAACATTTTGTTCTGGCCAGTAC 59.963 41.667 29.94 29.94 38.77 2.73
2501 4278 0.035458 CGGCCATATCCCTCACCTTC 59.965 60.000 2.24 0.00 0.00 3.46
2561 4339 3.718956 AGAGCTAAGATTATTGCCCCTGT 59.281 43.478 0.00 0.00 0.00 4.00
2563 4341 3.976654 TCAGAGCTAAGATTATTGCCCCT 59.023 43.478 0.00 0.00 0.00 4.79
2628 4408 8.928733 TGTAAAGAACAAATGAACTATACGTCC 58.071 33.333 0.00 0.00 34.29 4.79
2636 4416 6.366877 GCATGCATGTAAAGAACAAATGAACT 59.633 34.615 26.79 0.00 42.70 3.01
2662 4442 1.964373 GGACCGACCACGTTTGCAT 60.964 57.895 0.00 0.00 38.79 3.96
2696 4480 4.883585 ACATTTGGGTGCTGATGTATGTAG 59.116 41.667 0.00 0.00 31.41 2.74
2713 4656 1.670811 GGTGGTCGGCAGATACATTTG 59.329 52.381 0.00 0.00 0.00 2.32
2792 4736 4.505324 AACCAAAGGAGGCTTATAGACC 57.495 45.455 0.00 0.00 0.00 3.85
2803 4747 4.211920 TCCTACAAACCAAACCAAAGGAG 58.788 43.478 0.00 0.00 0.00 3.69
2804 4748 4.252570 TCCTACAAACCAAACCAAAGGA 57.747 40.909 0.00 0.00 0.00 3.36
2805 4749 5.545063 AATCCTACAAACCAAACCAAAGG 57.455 39.130 0.00 0.00 0.00 3.11
2806 4750 7.335673 ACAAAAATCCTACAAACCAAACCAAAG 59.664 33.333 0.00 0.00 0.00 2.77
2807 4751 7.168905 ACAAAAATCCTACAAACCAAACCAAA 58.831 30.769 0.00 0.00 0.00 3.28
2808 4752 6.712276 ACAAAAATCCTACAAACCAAACCAA 58.288 32.000 0.00 0.00 0.00 3.67
2809 4753 6.301169 ACAAAAATCCTACAAACCAAACCA 57.699 33.333 0.00 0.00 0.00 3.67
2810 4754 6.926826 CCTACAAAAATCCTACAAACCAAACC 59.073 38.462 0.00 0.00 0.00 3.27
2811 4755 7.718525 TCCTACAAAAATCCTACAAACCAAAC 58.281 34.615 0.00 0.00 0.00 2.93
2812 4756 7.899648 TCCTACAAAAATCCTACAAACCAAA 57.100 32.000 0.00 0.00 0.00 3.28
2813 4757 7.899648 TTCCTACAAAAATCCTACAAACCAA 57.100 32.000 0.00 0.00 0.00 3.67
2814 4758 8.485578 AATTCCTACAAAAATCCTACAAACCA 57.514 30.769 0.00 0.00 0.00 3.67
2815 4759 8.803235 AGAATTCCTACAAAAATCCTACAAACC 58.197 33.333 0.65 0.00 0.00 3.27
2855 4799 8.835439 GGACTTCAAATAAATTTTTCCTTTGCA 58.165 29.630 0.00 0.00 0.00 4.08
2856 4800 9.056005 AGGACTTCAAATAAATTTTTCCTTTGC 57.944 29.630 0.00 0.00 0.00 3.68
2860 4804 9.559732 CCAAAGGACTTCAAATAAATTTTTCCT 57.440 29.630 0.00 0.00 0.00 3.36
2861 4805 9.337396 ACCAAAGGACTTCAAATAAATTTTTCC 57.663 29.630 0.00 0.00 0.00 3.13
2865 4809 9.679661 ACAAACCAAAGGACTTCAAATAAATTT 57.320 25.926 0.00 0.00 0.00 1.82
2867 4811 9.981114 CTACAAACCAAAGGACTTCAAATAAAT 57.019 29.630 0.00 0.00 0.00 1.40
2868 4812 8.417884 CCTACAAACCAAAGGACTTCAAATAAA 58.582 33.333 0.00 0.00 31.64 1.40
2869 4813 7.947282 CCTACAAACCAAAGGACTTCAAATAA 58.053 34.615 0.00 0.00 31.64 1.40
2870 4814 7.519032 CCTACAAACCAAAGGACTTCAAATA 57.481 36.000 0.00 0.00 31.64 1.40
2871 4815 6.405278 CCTACAAACCAAAGGACTTCAAAT 57.595 37.500 0.00 0.00 31.64 2.32
2872 4816 5.845391 CCTACAAACCAAAGGACTTCAAA 57.155 39.130 0.00 0.00 31.64 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.