Multiple sequence alignment - TraesCS5A01G466100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G466100 chr5A 100.000 4476 0 0 4582 9057 644809028 644813503 0.000000e+00 8266.0
1 TraesCS5A01G466100 chr5A 100.000 4265 0 0 1 4265 644804447 644808711 0.000000e+00 7877.0
2 TraesCS5A01G466100 chr5D 92.971 3841 167 52 4601 8373 517425508 517429313 0.000000e+00 5502.0
3 TraesCS5A01G466100 chr5D 92.879 2247 121 19 872 3083 517421533 517423775 0.000000e+00 3227.0
4 TraesCS5A01G466100 chr5D 91.489 940 45 17 3077 4006 517423882 517424796 0.000000e+00 1260.0
5 TraesCS5A01G466100 chr5D 80.404 495 60 24 8576 9055 517429750 517430222 8.710000e-90 342.0
6 TraesCS5A01G466100 chr5D 91.707 205 15 1 4060 4262 517425036 517425240 5.350000e-72 283.0
7 TraesCS5A01G466100 chr5D 96.250 80 1 2 8416 8495 517429355 517429432 7.380000e-26 130.0
8 TraesCS5A01G466100 chr5B 92.895 2069 113 17 872 2917 650008849 650010906 0.000000e+00 2976.0
9 TraesCS5A01G466100 chr5B 93.882 1798 68 23 4596 6372 650012924 650014700 0.000000e+00 2673.0
10 TraesCS5A01G466100 chr5B 93.743 1790 73 28 6350 8131 650014708 650016466 0.000000e+00 2649.0
11 TraesCS5A01G466100 chr5B 90.323 961 55 17 3077 4027 650011123 650012055 0.000000e+00 1225.0
12 TraesCS5A01G466100 chr5B 80.000 375 48 16 8693 9055 650017302 650017661 1.510000e-62 252.0
13 TraesCS5A01G466100 chr5B 93.396 106 7 0 2978 3083 650010911 650011016 3.390000e-34 158.0
14 TraesCS5A01G466100 chr5B 88.889 117 13 0 8259 8375 650016727 650016843 2.640000e-30 145.0
15 TraesCS5A01G466100 chr5B 92.632 95 6 1 4168 4262 650012617 650012710 1.590000e-27 135.0
16 TraesCS5A01G466100 chr5B 97.222 72 2 0 8427 8498 650016861 650016932 1.230000e-23 122.0
17 TraesCS5A01G466100 chr5B 94.118 68 4 0 8195 8262 650016601 650016668 4.470000e-18 104.0
18 TraesCS5A01G466100 chr7A 95.178 871 27 8 1 871 32689026 32688171 0.000000e+00 1362.0
19 TraesCS5A01G466100 chr7B 92.923 862 48 4 1 861 542903414 542902565 0.000000e+00 1242.0
20 TraesCS5A01G466100 chr7B 80.491 856 141 13 3 851 639235609 639234773 4.610000e-177 632.0
21 TraesCS5A01G466100 chr3B 90.596 872 68 7 1 872 63443840 63444697 0.000000e+00 1144.0
22 TraesCS5A01G466100 chr2D 89.298 869 76 7 3 871 32412421 32411570 0.000000e+00 1074.0
23 TraesCS5A01G466100 chr2D 86.111 252 22 4 627 877 249911962 249911723 9.020000e-65 259.0
24 TraesCS5A01G466100 chr2D 96.774 31 1 0 5534 5564 163313246 163313276 1.600000e-02 52.8
25 TraesCS5A01G466100 chr1B 89.208 871 78 7 3 872 575729098 575728243 0.000000e+00 1074.0
26 TraesCS5A01G466100 chr2B 90.715 797 73 1 3 799 624367498 624366703 0.000000e+00 1061.0
27 TraesCS5A01G466100 chr1D 86.416 876 98 10 3 875 480818551 480817694 0.000000e+00 939.0
28 TraesCS5A01G466100 chr4B 80.117 855 146 13 3 851 543756111 543756947 4.650000e-172 616.0
29 TraesCS5A01G466100 chr4B 94.286 35 2 0 5530 5564 612160320 612160286 5.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G466100 chr5A 644804447 644813503 9056 False 8071.500000 8266 100.000 1 9057 2 chr5A.!!$F1 9056
1 TraesCS5A01G466100 chr5D 517421533 517430222 8689 False 1790.666667 5502 90.950 872 9055 6 chr5D.!!$F1 8183
2 TraesCS5A01G466100 chr5B 650008849 650017661 8812 False 1043.900000 2976 91.710 872 9055 10 chr5B.!!$F1 8183
3 TraesCS5A01G466100 chr7A 32688171 32689026 855 True 1362.000000 1362 95.178 1 871 1 chr7A.!!$R1 870
4 TraesCS5A01G466100 chr7B 542902565 542903414 849 True 1242.000000 1242 92.923 1 861 1 chr7B.!!$R1 860
5 TraesCS5A01G466100 chr7B 639234773 639235609 836 True 632.000000 632 80.491 3 851 1 chr7B.!!$R2 848
6 TraesCS5A01G466100 chr3B 63443840 63444697 857 False 1144.000000 1144 90.596 1 872 1 chr3B.!!$F1 871
7 TraesCS5A01G466100 chr2D 32411570 32412421 851 True 1074.000000 1074 89.298 3 871 1 chr2D.!!$R1 868
8 TraesCS5A01G466100 chr1B 575728243 575729098 855 True 1074.000000 1074 89.208 3 872 1 chr1B.!!$R1 869
9 TraesCS5A01G466100 chr2B 624366703 624367498 795 True 1061.000000 1061 90.715 3 799 1 chr2B.!!$R1 796
10 TraesCS5A01G466100 chr1D 480817694 480818551 857 True 939.000000 939 86.416 3 875 1 chr1D.!!$R1 872
11 TraesCS5A01G466100 chr4B 543756111 543756947 836 False 616.000000 616 80.117 3 851 1 chr4B.!!$F1 848

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
898 902 0.035439 ACATCCTGCCGTTTCCGATT 60.035 50.0 0.00 0.0 35.63 3.34 F
1615 1627 0.038892 CCTGCATTGCTGTGTGAACC 60.039 55.0 10.49 0.0 0.00 3.62 F
2878 2913 0.179056 AGAAACCAGTGGTCACGTGG 60.179 55.0 17.06 13.9 33.12 4.94 F
4634 5360 0.036732 TGACCCAATGAGGCAGTGAC 59.963 55.0 0.00 0.0 30.53 3.67 F
4804 5532 0.250124 TCATTTCCGCACGTGTTCCT 60.250 50.0 18.38 0.0 0.00 3.36 F
4914 5642 0.390603 CGCACCGTTGTCATCCCTAA 60.391 55.0 0.00 0.0 0.00 2.69 F
6718 7504 0.039618 TCCATTTGTGCTTCCCCTCC 59.960 55.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2134 2150 1.004044 CCAATGAGCCTGTCCTCTGTT 59.996 52.381 0.00 0.00 33.02 3.16 R
2893 2929 2.126734 GTTGCGCATGTGCCAGAC 60.127 61.111 27.42 18.73 37.91 3.51 R
4785 5513 0.250124 AGGAACACGTGCGGAAATGA 60.250 50.000 17.22 0.00 0.00 2.57 R
6204 6948 1.068474 GTGTCGCGTCAACAGCTAAT 58.932 50.000 7.80 0.00 0.00 1.73 R
6694 7480 1.620822 GGAAGCACAAATGGAGGTGT 58.379 50.000 0.00 0.00 37.35 4.16 R
6824 7610 4.275810 CAATGGATCTTGATGGTGGAAGT 58.724 43.478 0.00 0.00 0.00 3.01 R
8538 9501 0.034960 CACGAGAGGAGAGGAGTGGA 60.035 60.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.646653 GTCTTCACACTGACAAAGACATGATA 59.353 38.462 0.00 0.00 44.41 2.15
61 62 1.246056 GCTGTTCTCATGCCAGGCAA 61.246 55.000 20.84 0.89 43.62 4.52
163 165 3.000277 GCGATCAAATGTTCTCAGAGTCG 60.000 47.826 0.00 0.00 0.00 4.18
190 192 6.542735 AGAGAGCGACAATAGTGACTGTTATA 59.457 38.462 0.00 0.00 0.00 0.98
273 275 3.665675 CTCTGAAGCGGGTTCGGGG 62.666 68.421 24.08 19.34 41.41 5.73
643 646 4.096382 GGCGCCTATCTTTTCTGAAATTGA 59.904 41.667 22.15 6.28 0.00 2.57
699 702 1.665916 CATGTCGATAGGGCAGCCG 60.666 63.158 5.00 0.00 0.00 5.52
720 724 1.341089 ACGTCCCTGCTCATCTCTGTA 60.341 52.381 0.00 0.00 0.00 2.74
821 825 5.763444 CAGATTTTGCTGAGATTTTGCTG 57.237 39.130 0.00 0.00 38.14 4.41
862 866 2.046217 GCTCCCGGTTTCACCCTC 60.046 66.667 0.00 0.00 33.75 4.30
864 868 1.003718 CTCCCGGTTTCACCCTCAC 60.004 63.158 0.00 0.00 33.75 3.51
869 873 1.751924 CCGGTTTCACCCTCACAAAAA 59.248 47.619 0.00 0.00 33.75 1.94
898 902 0.035439 ACATCCTGCCGTTTCCGATT 60.035 50.000 0.00 0.00 35.63 3.34
1254 1259 2.967397 CAGCAGTACGGACGGGAA 59.033 61.111 0.00 0.00 0.00 3.97
1306 1311 1.628340 TGAGGAGATTTCTTTCGGCCA 59.372 47.619 2.24 0.00 0.00 5.36
1310 1315 4.089361 AGGAGATTTCTTTCGGCCAATTT 58.911 39.130 2.24 0.00 0.00 1.82
1349 1354 1.031571 TGATTGACTGATTGGGCGGC 61.032 55.000 0.00 0.00 0.00 6.53
1383 1388 1.750682 GCATTTCCCCGAGCTGGTTAT 60.751 52.381 0.00 0.00 35.15 1.89
1394 1399 0.040067 GCTGGTTATGCGCATTAGGC 60.040 55.000 30.42 20.30 39.90 3.93
1462 1467 0.244994 AACAGCCAACACGCACAAAA 59.755 45.000 0.00 0.00 0.00 2.44
1479 1484 7.754924 ACGCACAAAATTTACATGATTTAGAGG 59.245 33.333 0.00 0.00 0.00 3.69
1480 1485 7.253750 CGCACAAAATTTACATGATTTAGAGGC 60.254 37.037 0.00 0.00 0.00 4.70
1487 1492 2.205074 CATGATTTAGAGGCGTTCGCT 58.795 47.619 16.40 3.31 0.00 4.93
1503 1508 0.717224 CGCTGAAAATGGCATGCAAC 59.283 50.000 21.36 3.15 0.00 4.17
1506 1511 2.809696 GCTGAAAATGGCATGCAACTTT 59.190 40.909 21.36 11.23 0.00 2.66
1510 1515 6.297694 TGAAAATGGCATGCAACTTTTTAC 57.702 33.333 21.36 10.56 0.00 2.01
1524 1529 7.537306 TGCAACTTTTTACGATTTAATCTCAGC 59.463 33.333 3.34 0.00 0.00 4.26
1548 1559 3.010584 AGGCTTTCTGGAGCTGGAAAATA 59.989 43.478 0.00 0.00 42.32 1.40
1549 1560 3.956848 GGCTTTCTGGAGCTGGAAAATAT 59.043 43.478 0.00 0.00 42.32 1.28
1555 1566 4.721776 TCTGGAGCTGGAAAATATGGTAGT 59.278 41.667 0.00 0.00 0.00 2.73
1562 1573 7.293073 AGCTGGAAAATATGGTAGTCAATCAT 58.707 34.615 0.00 0.00 0.00 2.45
1565 1576 9.123902 CTGGAAAATATGGTAGTCAATCATTCA 57.876 33.333 0.00 0.00 0.00 2.57
1567 1578 9.125026 GGAAAATATGGTAGTCAATCATTCACT 57.875 33.333 0.00 0.00 0.00 3.41
1615 1627 0.038892 CCTGCATTGCTGTGTGAACC 60.039 55.000 10.49 0.00 0.00 3.62
1617 1629 0.754587 TGCATTGCTGTGTGAACCCA 60.755 50.000 10.49 0.00 0.00 4.51
1631 1643 4.767928 TGTGAACCCAACTTTGTTGTAACT 59.232 37.500 9.20 0.00 0.00 2.24
1648 1663 6.707440 TGTAACTTGTGAATTTCATGTGGT 57.293 33.333 1.78 0.00 0.00 4.16
1649 1664 6.734137 TGTAACTTGTGAATTTCATGTGGTC 58.266 36.000 1.78 0.00 0.00 4.02
1650 1665 4.488126 ACTTGTGAATTTCATGTGGTCG 57.512 40.909 1.78 0.00 0.00 4.79
1685 1700 0.957362 AAACTTCTCTGCTGCTTGGC 59.043 50.000 0.00 0.00 0.00 4.52
1793 1808 0.672401 TTCCGCCAATCGAAGTGGTC 60.672 55.000 17.23 10.20 41.67 4.02
1865 1881 6.749118 GTCTTCACAATGCCATATCTGAAAAC 59.251 38.462 0.00 0.00 0.00 2.43
1915 1931 8.686334 TGTTCAGCTTCTTCTTGTTTCTTAAAT 58.314 29.630 0.00 0.00 0.00 1.40
2057 2073 3.059166 GCAGGTAAAGCACACCAATTTG 58.941 45.455 4.47 0.00 38.62 2.32
2075 2091 7.056635 CCAATTTGGTGTCATAGTATCTTCCT 58.943 38.462 7.31 0.00 31.35 3.36
2076 2092 7.012704 CCAATTTGGTGTCATAGTATCTTCCTG 59.987 40.741 7.31 0.00 31.35 3.86
2134 2150 4.908601 ATGACAGATTCCACTTGGTGTA 57.091 40.909 0.00 0.00 36.34 2.90
2245 2261 4.248859 CTCACAGAGGTGTCCTTTATGTG 58.751 47.826 16.40 16.40 45.45 3.21
2592 2608 1.962807 TGCAACCCAATTTCAGGAGTG 59.037 47.619 0.00 0.00 0.00 3.51
2635 2651 2.106684 GGTGGAAGAGGAAACTGAGGTT 59.893 50.000 0.00 0.00 44.43 3.50
2660 2676 7.446769 TGCAAAAACTCAGGTACTACTGAATA 58.553 34.615 3.81 0.00 46.05 1.75
2683 2699 9.530633 AATAACCGAGTTACTGAGATCATTAAC 57.469 33.333 12.64 12.64 40.27 2.01
2694 2710 8.854614 ACTGAGATCATTAACTAACAAAGCTT 57.145 30.769 0.00 0.00 0.00 3.74
2695 2711 8.725148 ACTGAGATCATTAACTAACAAAGCTTG 58.275 33.333 0.00 0.00 0.00 4.01
2696 2712 7.530010 TGAGATCATTAACTAACAAAGCTTGC 58.470 34.615 0.00 0.00 0.00 4.01
2697 2713 7.174772 TGAGATCATTAACTAACAAAGCTTGCA 59.825 33.333 0.00 0.00 0.00 4.08
2698 2714 7.885297 AGATCATTAACTAACAAAGCTTGCAA 58.115 30.769 0.00 0.00 0.00 4.08
2699 2715 7.809806 AGATCATTAACTAACAAAGCTTGCAAC 59.190 33.333 0.00 0.00 0.00 4.17
2700 2716 6.212955 TCATTAACTAACAAAGCTTGCAACC 58.787 36.000 0.00 0.00 0.00 3.77
2701 2717 5.845391 TTAACTAACAAAGCTTGCAACCT 57.155 34.783 0.00 0.00 0.00 3.50
2702 2718 3.715628 ACTAACAAAGCTTGCAACCTG 57.284 42.857 0.00 0.00 0.00 4.00
2730 2749 4.072131 TCAAATCAGAGTAGGGTGCAAAC 58.928 43.478 0.00 0.00 0.00 2.93
2743 2762 4.653801 AGGGTGCAAACTCCATTTAGTTTT 59.346 37.500 0.00 0.00 45.20 2.43
2787 2818 6.294473 AGACCTTCCAAGAGCATTGTATATG 58.706 40.000 1.60 0.00 0.00 1.78
2796 2827 9.669353 CCAAGAGCATTGTATATGTTAAATCAC 57.331 33.333 1.60 0.00 0.00 3.06
2812 2843 9.944663 TGTTAAATCACTCAGTTACAAAATGTC 57.055 29.630 0.00 0.00 0.00 3.06
2829 2860 5.725551 AATGTCTGGGGTCCACAATTATA 57.274 39.130 0.00 0.00 0.00 0.98
2841 2876 9.167311 GGGTCCACAATTATATAGCTATCAAAG 57.833 37.037 10.16 6.02 0.00 2.77
2842 2877 9.944376 GGTCCACAATTATATAGCTATCAAAGA 57.056 33.333 10.16 0.00 0.00 2.52
2874 2909 2.618709 CAAAGGAGAAACCAGTGGTCAC 59.381 50.000 17.06 12.64 42.04 3.67
2875 2910 0.393077 AGGAGAAACCAGTGGTCACG 59.607 55.000 17.06 0.00 42.04 4.35
2878 2913 0.179056 AGAAACCAGTGGTCACGTGG 60.179 55.000 17.06 13.90 33.12 4.94
2893 2929 3.185594 TCACGTGGAAGCAAGAAATTACG 59.814 43.478 17.00 0.00 36.48 3.18
2903 2939 3.119849 GCAAGAAATTACGTCTGGCACAT 60.120 43.478 0.00 0.00 41.10 3.21
2905 2941 2.420022 AGAAATTACGTCTGGCACATGC 59.580 45.455 0.00 0.00 38.20 4.06
2942 2979 5.241506 TGGACTTAAAAAGCATGGACTCTTG 59.758 40.000 0.00 0.00 0.00 3.02
2943 2980 5.126396 ACTTAAAAAGCATGGACTCTTGC 57.874 39.130 0.00 0.00 42.33 4.01
2954 2992 3.857052 TGGACTCTTGCGTTTATAGTGG 58.143 45.455 0.00 0.00 0.00 4.00
2957 2995 4.508124 GGACTCTTGCGTTTATAGTGGATG 59.492 45.833 0.00 0.00 0.00 3.51
2960 2998 6.040878 ACTCTTGCGTTTATAGTGGATGTAC 58.959 40.000 0.00 0.00 0.00 2.90
3067 3105 9.691362 AAAATTACCATTGTAAGATGTGTTGAC 57.309 29.630 0.00 0.00 40.16 3.18
3109 3259 4.728772 TCAGTTGTGAAATCAAGGGACAT 58.271 39.130 0.00 0.00 0.00 3.06
3124 3274 7.565680 TCAAGGGACATATCTCTCTTTTAACC 58.434 38.462 0.00 0.00 32.95 2.85
3134 3284 6.903883 TCTCTCTTTTAACCGCATATTGTC 57.096 37.500 0.00 0.00 0.00 3.18
3190 3341 2.079158 ACAAAGGATGCATGTCACTCG 58.921 47.619 2.46 0.00 0.00 4.18
3215 3366 5.246203 TCCAGTTGGCATATATAGACAGGAC 59.754 44.000 0.00 0.00 34.44 3.85
3216 3367 5.482908 CAGTTGGCATATATAGACAGGACC 58.517 45.833 0.00 0.00 0.00 4.46
3225 3376 7.094634 GCATATATAGACAGGACCCACAAATTG 60.095 40.741 0.00 0.00 0.00 2.32
3228 3379 1.000274 GACAGGACCCACAAATTGTGC 60.000 52.381 19.82 7.09 46.51 4.57
3229 3380 1.331214 CAGGACCCACAAATTGTGCT 58.669 50.000 19.82 9.09 46.51 4.40
3243 3395 8.961092 CACAAATTGTGCTTATATTAGACATGC 58.039 33.333 13.51 0.00 41.89 4.06
3251 3403 5.288712 GCTTATATTAGACATGCGCACGTAT 59.711 40.000 14.90 11.73 0.00 3.06
3275 3427 4.908601 TGACCACATGACTTCCACTATT 57.091 40.909 0.00 0.00 0.00 1.73
3320 3472 7.750229 TTGAAGTATGCAAAATCTCAAGTCT 57.250 32.000 0.00 0.00 23.70 3.24
3324 3476 9.323985 GAAGTATGCAAAATCTCAAGTCTAGAT 57.676 33.333 0.00 0.00 35.17 1.98
3396 3560 9.284968 AGTTAAAATCTGTGTTATGTACTGCTT 57.715 29.630 0.00 0.00 0.00 3.91
3507 3671 5.537300 ATCTTGTCATGGAAGCTATACGT 57.463 39.130 0.00 0.00 0.00 3.57
3531 3695 4.202284 GGTGGTTGTCAGGTTAGTTGACTA 60.202 45.833 6.89 0.00 44.08 2.59
3663 3831 7.875041 AGATAACAGTCAACATATGTAGCCATC 59.125 37.037 9.21 4.81 32.29 3.51
3715 3883 8.980596 TCATTGGAAATATGCATACCTTCTTTT 58.019 29.630 21.25 12.89 0.00 2.27
3717 3885 7.716799 TGGAAATATGCATACCTTCTTTTGT 57.283 32.000 21.25 0.00 0.00 2.83
3718 3886 8.133024 TGGAAATATGCATACCTTCTTTTGTT 57.867 30.769 21.25 3.99 0.00 2.83
3719 3887 8.592809 TGGAAATATGCATACCTTCTTTTGTTT 58.407 29.630 21.25 10.67 0.00 2.83
3720 3888 8.872845 GGAAATATGCATACCTTCTTTTGTTTG 58.127 33.333 21.25 0.00 0.00 2.93
3721 3889 9.638239 GAAATATGCATACCTTCTTTTGTTTGA 57.362 29.630 8.99 0.00 0.00 2.69
3722 3890 8.986477 AATATGCATACCTTCTTTTGTTTGAC 57.014 30.769 8.99 0.00 0.00 3.18
3723 3891 5.843673 TGCATACCTTCTTTTGTTTGACA 57.156 34.783 0.00 0.00 0.00 3.58
3843 4011 5.702209 CCAAACTATTTGAGCTTTTGGCAAT 59.298 36.000 10.12 0.00 43.26 3.56
3863 4031 5.807011 GCAATAAAGCCAAGGTTACTGATTG 59.193 40.000 0.00 0.00 0.00 2.67
3864 4032 6.572314 GCAATAAAGCCAAGGTTACTGATTGT 60.572 38.462 0.00 0.00 0.00 2.71
3865 4033 7.362574 GCAATAAAGCCAAGGTTACTGATTGTA 60.363 37.037 0.00 0.00 0.00 2.41
3894 4062 4.164294 CCTTGTCTTAGTAAAGTCGACCG 58.836 47.826 13.01 0.00 34.13 4.79
3913 4081 2.556622 CCGCATTTCCTGTTGTTACCTT 59.443 45.455 0.00 0.00 0.00 3.50
3950 4118 4.147321 CACCTGGGCTATTTCATTATGCT 58.853 43.478 0.00 0.00 0.00 3.79
3976 4144 8.476447 TCATTTGGTATGTTATAACCTCGTGTA 58.524 33.333 13.01 0.00 36.67 2.90
3977 4145 8.761497 CATTTGGTATGTTATAACCTCGTGTAG 58.239 37.037 13.01 0.00 36.67 2.74
3984 4152 6.384224 TGTTATAACCTCGTGTAGTCAACTG 58.616 40.000 13.01 0.00 0.00 3.16
3995 4163 6.151480 TCGTGTAGTCAACTGGTTATATGTCA 59.849 38.462 0.00 0.00 0.00 3.58
4016 4184 7.267857 TGTCATAACCAGTGATGTCATTCTAG 58.732 38.462 0.00 0.00 0.00 2.43
4027 4195 7.617723 AGTGATGTCATTCTAGTTCTACTCCTT 59.382 37.037 0.00 0.00 0.00 3.36
4030 4198 5.944599 TGTCATTCTAGTTCTACTCCTTCGT 59.055 40.000 0.00 0.00 0.00 3.85
4033 4201 7.813627 GTCATTCTAGTTCTACTCCTTCGTTTT 59.186 37.037 0.00 0.00 0.00 2.43
4034 4202 8.365647 TCATTCTAGTTCTACTCCTTCGTTTTT 58.634 33.333 0.00 0.00 0.00 1.94
4070 4485 0.463833 GGTGGGGCGAATACAGGAAG 60.464 60.000 0.00 0.00 0.00 3.46
4073 4488 1.527370 GGGCGAATACAGGAAGCCT 59.473 57.895 4.73 0.00 46.44 4.58
4075 4490 1.348036 GGGCGAATACAGGAAGCCTAT 59.652 52.381 4.73 0.00 46.44 2.57
4165 4580 2.590821 AGTGAATGCTTGCTGGAACTT 58.409 42.857 0.00 0.00 0.00 2.66
4166 4581 2.295349 AGTGAATGCTTGCTGGAACTTG 59.705 45.455 0.00 0.00 0.00 3.16
4182 4597 1.971357 ACTTGGAGACACCTTCGATGT 59.029 47.619 0.00 0.00 42.67 3.06
4183 4598 2.289072 ACTTGGAGACACCTTCGATGTG 60.289 50.000 12.56 12.56 42.67 3.21
4241 4844 4.567558 TGCAGAAAAACACAAGCAAATGAG 59.432 37.500 0.00 0.00 0.00 2.90
4601 5204 3.917760 CGGTGGAGGATCGAGGGC 61.918 72.222 0.00 0.00 34.37 5.19
4609 5332 3.859414 GATCGAGGGCAGGCAGCT 61.859 66.667 0.81 0.00 44.79 4.24
4634 5360 0.036732 TGACCCAATGAGGCAGTGAC 59.963 55.000 0.00 0.00 30.53 3.67
4649 5377 3.262420 CAGTGACTAGGGAAACGATTGG 58.738 50.000 0.00 0.00 0.00 3.16
4734 5462 0.323360 TGCCTGTTGGAATGGGCTAC 60.323 55.000 0.00 0.00 44.36 3.58
4785 5513 3.192633 AGCGCCTTTGGATACGAAAATTT 59.807 39.130 2.29 0.00 40.22 1.82
4787 5515 4.728534 CGCCTTTGGATACGAAAATTTCA 58.271 39.130 6.53 0.00 40.22 2.69
4794 5522 5.336744 TGGATACGAAAATTTCATTTCCGC 58.663 37.500 6.53 0.00 36.21 5.54
4800 5528 3.363341 AAATTTCATTTCCGCACGTGT 57.637 38.095 18.38 0.00 0.00 4.49
4804 5532 0.250124 TCATTTCCGCACGTGTTCCT 60.250 50.000 18.38 0.00 0.00 3.36
4806 5534 0.250124 ATTTCCGCACGTGTTCCTCA 60.250 50.000 18.38 0.00 0.00 3.86
4865 5593 7.662258 TGTTTCCATATTTTCTCTACGTTTCCA 59.338 33.333 0.00 0.00 0.00 3.53
4866 5594 8.674607 GTTTCCATATTTTCTCTACGTTTCCAT 58.325 33.333 0.00 0.00 0.00 3.41
4910 5638 1.024579 ATTCCGCACCGTTGTCATCC 61.025 55.000 0.00 0.00 0.00 3.51
4911 5639 3.124921 CCGCACCGTTGTCATCCC 61.125 66.667 0.00 0.00 0.00 3.85
4912 5640 2.047274 CGCACCGTTGTCATCCCT 60.047 61.111 0.00 0.00 0.00 4.20
4913 5641 1.216977 CGCACCGTTGTCATCCCTA 59.783 57.895 0.00 0.00 0.00 3.53
4914 5642 0.390603 CGCACCGTTGTCATCCCTAA 60.391 55.000 0.00 0.00 0.00 2.69
4915 5643 1.742411 CGCACCGTTGTCATCCCTAAT 60.742 52.381 0.00 0.00 0.00 1.73
4916 5644 1.670811 GCACCGTTGTCATCCCTAATG 59.329 52.381 0.00 0.00 36.65 1.90
4917 5645 2.288666 CACCGTTGTCATCCCTAATGG 58.711 52.381 0.00 0.00 35.94 3.16
4930 5658 6.385176 TCATCCCTAATGGCCTAATCTAGATG 59.615 42.308 5.86 8.85 35.94 2.90
4960 5688 5.351465 CACTTACACAGCTATACCTGTTTGG 59.649 44.000 0.00 0.00 43.19 3.28
4977 5705 1.599518 GGCGTCCATCACACCAACA 60.600 57.895 0.00 0.00 0.00 3.33
5261 5989 3.165071 ACCCCATGGAATTTCAGTTGAC 58.835 45.455 15.22 0.00 34.81 3.18
5267 5995 5.922544 CCATGGAATTTCAGTTGACTGTTTC 59.077 40.000 5.56 11.40 44.12 2.78
5268 5996 6.239120 CCATGGAATTTCAGTTGACTGTTTCT 60.239 38.462 5.56 0.00 44.12 2.52
5270 5998 6.795399 TGGAATTTCAGTTGACTGTTTCTTC 58.205 36.000 10.66 9.35 44.12 2.87
5322 6057 6.920569 AGTTTACTGTGTCTGGTTGTTAAG 57.079 37.500 0.00 0.00 0.00 1.85
5329 6064 8.514330 ACTGTGTCTGGTTGTTAAGAATAAAA 57.486 30.769 0.00 0.00 0.00 1.52
5369 6104 6.780457 AATTTTAGTGCTGGCATAACTCAT 57.220 33.333 5.57 0.00 0.00 2.90
5406 6143 4.985413 TGCTATGCTATTTCTGTTTGCAC 58.015 39.130 0.00 0.00 36.44 4.57
5414 6151 2.121291 TTCTGTTTGCACCTGTGTCA 57.879 45.000 0.00 0.00 0.00 3.58
5451 6188 9.772973 AGTGTGTTCTACTTAATATTTGACACA 57.227 29.630 0.00 0.00 33.00 3.72
5485 6222 6.546428 TCTTGCAGGTAGAGCTAGTTATTT 57.454 37.500 0.00 0.00 36.46 1.40
5496 6233 7.407393 AGAGCTAGTTATTTTACCTCGTTCT 57.593 36.000 0.00 0.00 0.00 3.01
5544 6281 2.292785 AAAACCAACCGCCTCCACCT 62.293 55.000 0.00 0.00 0.00 4.00
5577 6314 6.153340 CACCACCTCCACAAAATCAAGATAAT 59.847 38.462 0.00 0.00 0.00 1.28
5610 6347 5.904169 TCAAGATGAGAAGGAGGAAGATGAT 59.096 40.000 0.00 0.00 0.00 2.45
5659 6396 7.099120 GGTTGAATTTTATGATTGAGCAACCT 58.901 34.615 0.20 0.00 45.54 3.50
5896 6633 1.141053 GAAGACAGGGGCCGATACATT 59.859 52.381 0.00 0.00 0.00 2.71
5919 6656 2.293170 GCCTATGCTTCCAAAGGTCTC 58.707 52.381 0.00 0.00 33.53 3.36
5938 6675 5.763204 GGTCTCAAGTTTTACCTCATCAACA 59.237 40.000 0.00 0.00 0.00 3.33
5947 6684 2.498167 ACCTCATCAACACTGCAACTC 58.502 47.619 0.00 0.00 0.00 3.01
5948 6685 2.105477 ACCTCATCAACACTGCAACTCT 59.895 45.455 0.00 0.00 0.00 3.24
5983 6720 6.669125 TGTTCAAACATTCCTGAATCCATT 57.331 33.333 0.00 0.00 34.26 3.16
6003 6740 7.359595 TCCATTCTCGTGTTTGTTTCTTTATG 58.640 34.615 0.00 0.00 0.00 1.90
6064 6801 9.211485 CTGTTTTATTGCATTTTGAATTCCTCT 57.789 29.630 2.27 0.00 0.00 3.69
6072 6809 5.589192 CATTTTGAATTCCTCTGATGCCTC 58.411 41.667 2.27 0.00 0.00 4.70
6122 6859 3.857157 AGCAGACACCTTCCTTTGTAA 57.143 42.857 0.00 0.00 0.00 2.41
6361 7105 2.279741 CTCTGGTCTGTCTCTCTCTCG 58.720 57.143 0.00 0.00 0.00 4.04
6402 7180 4.757594 GCTTGTGCAATTTCATGGGAATA 58.242 39.130 0.00 0.00 39.41 1.75
6441 7219 7.274033 CAGTCATGTTTTATGTATGTGGCAAAG 59.726 37.037 0.00 0.00 0.00 2.77
6443 7221 5.459536 TGTTTTATGTATGTGGCAAAGCA 57.540 34.783 0.00 0.00 0.00 3.91
6449 7227 7.637631 TTATGTATGTGGCAAAGCAGATTTA 57.362 32.000 0.00 0.00 0.00 1.40
6488 7266 6.861065 TCACAACTCTGTTTGGACTTATTC 57.139 37.500 0.00 0.00 31.64 1.75
6612 7390 4.158764 ACACAAGCAGAGATCAGGTACTAC 59.841 45.833 0.00 0.00 36.02 2.73
6644 7422 8.934825 TGTGAAAATTTAGCATTAGAATTTGCC 58.065 29.630 0.00 0.00 39.72 4.52
6678 7464 8.964420 TTTAGTGATTAGCATTTGTTACTTGC 57.036 30.769 0.00 0.00 36.63 4.01
6682 7468 2.336554 AGCATTTGTTACTTGCTGCG 57.663 45.000 7.09 0.00 44.63 5.18
6694 7480 2.036733 ACTTGCTGCGTACCTTGTAAGA 59.963 45.455 9.95 0.00 0.00 2.10
6717 7503 1.467920 CTCCATTTGTGCTTCCCCTC 58.532 55.000 0.00 0.00 0.00 4.30
6718 7504 0.039618 TCCATTTGTGCTTCCCCTCC 59.960 55.000 0.00 0.00 0.00 4.30
6818 7604 1.847328 TCCGTGGAGACTATGCTGAA 58.153 50.000 0.00 0.00 0.00 3.02
6824 7610 4.096532 CGTGGAGACTATGCTGAAGTTCTA 59.903 45.833 4.17 0.00 0.00 2.10
6952 7738 5.758296 AGAACTGCGTTGAATTCTTCTGTAA 59.242 36.000 7.05 0.00 0.00 2.41
7187 7974 5.072600 ACCACTCTTATCCTAACACCAAACA 59.927 40.000 0.00 0.00 0.00 2.83
7370 8157 1.102978 CGGGATTCGCCAAGGAAATT 58.897 50.000 0.00 0.00 38.95 1.82
7524 8324 0.109226 GAGTCCGAGGAACCTTGTCG 60.109 60.000 7.26 1.47 0.00 4.35
7540 8340 5.180680 ACCTTGTCGCCACTTAAAAAGATAC 59.819 40.000 0.00 0.00 0.00 2.24
7562 8362 3.624861 CACCTGCCATCTTCATCACTAAC 59.375 47.826 0.00 0.00 0.00 2.34
7661 8461 5.432060 AGGGAAATACTACTACCTGCCAAAT 59.568 40.000 0.00 0.00 0.00 2.32
7685 8485 2.813908 GACGCCGTGATTTCCGCT 60.814 61.111 0.00 0.00 0.00 5.52
7691 8491 2.034879 CGTGATTTCCGCTGCCACT 61.035 57.895 0.00 0.00 0.00 4.00
7747 8548 2.206515 ATCTCGGAGCATCGATCGCC 62.207 60.000 11.09 4.30 38.55 5.54
7771 8572 2.035321 CGCCCAATTGTTGTTTGTACCT 59.965 45.455 4.43 0.00 0.00 3.08
7776 8577 5.288804 CCAATTGTTGTTTGTACCTTCTGG 58.711 41.667 4.43 0.00 39.83 3.86
7821 8623 2.169832 TTGTGCAGCTGTCCTTAGTC 57.830 50.000 16.64 0.00 0.00 2.59
7833 8635 5.279556 GCTGTCCTTAGTCCTTTCTGTAACT 60.280 44.000 0.00 0.00 0.00 2.24
7834 8636 6.741801 GCTGTCCTTAGTCCTTTCTGTAACTT 60.742 42.308 0.00 0.00 0.00 2.66
7931 8733 0.895100 CAGCACCAGCAGGGCTAAAA 60.895 55.000 10.09 0.00 45.49 1.52
8038 8840 4.759564 CAGAAATGCGCTGCTGTC 57.240 55.556 9.73 0.00 0.00 3.51
8055 8857 3.370061 GCTGTCGGGTGTCACTAAATAAC 59.630 47.826 2.35 0.00 0.00 1.89
8081 8883 8.586273 CATTCCTTCATTTTTGTAAAGCATACG 58.414 33.333 0.00 0.00 0.00 3.06
8142 8944 3.225272 TGGTGACAGCGTGGTTATG 57.775 52.632 0.00 0.00 35.01 1.90
8143 8945 0.394938 TGGTGACAGCGTGGTTATGT 59.605 50.000 0.00 0.00 35.01 2.29
8144 8946 0.796312 GGTGACAGCGTGGTTATGTG 59.204 55.000 0.00 0.00 0.00 3.21
8145 8947 1.508632 GTGACAGCGTGGTTATGTGT 58.491 50.000 0.00 0.00 0.00 3.72
8147 8949 2.289547 GTGACAGCGTGGTTATGTGTTT 59.710 45.455 0.00 0.00 0.00 2.83
8148 8950 3.495377 GTGACAGCGTGGTTATGTGTTTA 59.505 43.478 0.00 0.00 0.00 2.01
8149 8951 3.495377 TGACAGCGTGGTTATGTGTTTAC 59.505 43.478 0.00 0.00 0.00 2.01
8150 8952 2.809696 ACAGCGTGGTTATGTGTTTACC 59.190 45.455 0.00 0.00 0.00 2.85
8151 8953 2.160813 CAGCGTGGTTATGTGTTTACCC 59.839 50.000 0.00 0.00 0.00 3.69
8269 9173 8.357402 GTGGTTGATAACAGTAACAAATTTCCT 58.643 33.333 0.00 0.00 0.00 3.36
8297 9232 3.117738 AGGCACCCTGAAAATAGATCCAG 60.118 47.826 0.00 0.00 29.57 3.86
8303 9238 5.195940 CCCTGAAAATAGATCCAGCAGAAA 58.804 41.667 0.00 0.00 0.00 2.52
8306 9241 7.147776 CCCTGAAAATAGATCCAGCAGAAAATT 60.148 37.037 0.00 0.00 0.00 1.82
8307 9242 7.705325 CCTGAAAATAGATCCAGCAGAAAATTG 59.295 37.037 0.00 0.00 0.00 2.32
8369 9304 3.066190 TCAGACGGTACAGCGGGG 61.066 66.667 5.75 0.00 0.00 5.73
8377 9312 0.463833 GGTACAGCGGGGAGAAATGG 60.464 60.000 0.00 0.00 0.00 3.16
8379 9314 1.632018 TACAGCGGGGAGAAATGGGG 61.632 60.000 0.00 0.00 0.00 4.96
8400 9363 5.904362 GGAGACCTTGCTGTCATTTTTAT 57.096 39.130 4.79 0.00 37.73 1.40
8401 9364 6.272822 GGAGACCTTGCTGTCATTTTTATT 57.727 37.500 4.79 0.00 37.73 1.40
8402 9365 6.691508 GGAGACCTTGCTGTCATTTTTATTT 58.308 36.000 4.79 0.00 37.73 1.40
8403 9366 6.587608 GGAGACCTTGCTGTCATTTTTATTTG 59.412 38.462 4.79 0.00 37.73 2.32
8404 9367 5.928264 AGACCTTGCTGTCATTTTTATTTGC 59.072 36.000 4.79 0.00 37.73 3.68
8405 9368 4.996758 ACCTTGCTGTCATTTTTATTTGCC 59.003 37.500 0.00 0.00 0.00 4.52
8406 9369 5.221702 ACCTTGCTGTCATTTTTATTTGCCT 60.222 36.000 0.00 0.00 0.00 4.75
8407 9370 6.014669 ACCTTGCTGTCATTTTTATTTGCCTA 60.015 34.615 0.00 0.00 0.00 3.93
8408 9371 6.873076 CCTTGCTGTCATTTTTATTTGCCTAA 59.127 34.615 0.00 0.00 0.00 2.69
8409 9372 7.387397 CCTTGCTGTCATTTTTATTTGCCTAAA 59.613 33.333 0.00 0.00 0.00 1.85
8410 9373 8.668510 TTGCTGTCATTTTTATTTGCCTAAAA 57.331 26.923 0.00 0.00 0.00 1.52
8411 9374 8.668510 TGCTGTCATTTTTATTTGCCTAAAAA 57.331 26.923 9.66 9.66 41.96 1.94
8502 9465 6.690194 CTTATCAAGCAAGCCAGATTTAGT 57.310 37.500 2.81 0.00 0.00 2.24
8503 9466 7.792374 CTTATCAAGCAAGCCAGATTTAGTA 57.208 36.000 2.81 0.00 0.00 1.82
8504 9467 7.553881 TTATCAAGCAAGCCAGATTTAGTAC 57.446 36.000 2.81 0.00 0.00 2.73
8505 9468 4.905429 TCAAGCAAGCCAGATTTAGTACA 58.095 39.130 0.00 0.00 0.00 2.90
8506 9469 4.937620 TCAAGCAAGCCAGATTTAGTACAG 59.062 41.667 0.00 0.00 0.00 2.74
8507 9470 4.826274 AGCAAGCCAGATTTAGTACAGA 57.174 40.909 0.00 0.00 0.00 3.41
8508 9471 5.165961 AGCAAGCCAGATTTAGTACAGAA 57.834 39.130 0.00 0.00 0.00 3.02
8509 9472 5.560724 AGCAAGCCAGATTTAGTACAGAAA 58.439 37.500 0.00 0.00 0.00 2.52
8510 9473 5.645497 AGCAAGCCAGATTTAGTACAGAAAG 59.355 40.000 0.00 0.00 0.00 2.62
8511 9474 5.412904 GCAAGCCAGATTTAGTACAGAAAGT 59.587 40.000 0.00 0.00 0.00 2.66
8512 9475 6.594159 GCAAGCCAGATTTAGTACAGAAAGTA 59.406 38.462 0.00 0.00 0.00 2.24
8513 9476 7.119262 GCAAGCCAGATTTAGTACAGAAAGTAA 59.881 37.037 0.00 0.00 33.72 2.24
8514 9477 8.999431 CAAGCCAGATTTAGTACAGAAAGTAAA 58.001 33.333 0.00 0.00 33.72 2.01
8515 9478 8.549338 AGCCAGATTTAGTACAGAAAGTAAAC 57.451 34.615 0.00 0.00 33.72 2.01
8516 9479 7.606839 AGCCAGATTTAGTACAGAAAGTAAACC 59.393 37.037 0.00 0.00 33.72 3.27
8517 9480 7.389607 GCCAGATTTAGTACAGAAAGTAAACCA 59.610 37.037 0.00 0.00 33.72 3.67
8518 9481 8.936864 CCAGATTTAGTACAGAAAGTAAACCAG 58.063 37.037 0.00 0.00 33.72 4.00
8519 9482 9.706691 CAGATTTAGTACAGAAAGTAAACCAGA 57.293 33.333 0.00 0.00 33.72 3.86
8523 9486 9.538508 TTTAGTACAGAAAGTAAACCAGAAGAC 57.461 33.333 0.00 0.00 33.72 3.01
8524 9487 6.522946 AGTACAGAAAGTAAACCAGAAGACC 58.477 40.000 0.00 0.00 33.72 3.85
8525 9488 4.715713 ACAGAAAGTAAACCAGAAGACCC 58.284 43.478 0.00 0.00 0.00 4.46
8526 9489 4.072839 CAGAAAGTAAACCAGAAGACCCC 58.927 47.826 0.00 0.00 0.00 4.95
8527 9490 3.074094 AGAAAGTAAACCAGAAGACCCCC 59.926 47.826 0.00 0.00 0.00 5.40
8546 9509 4.423209 GCCCCTCCCTCCACTCCT 62.423 72.222 0.00 0.00 0.00 3.69
8547 9510 2.041405 CCCCTCCCTCCACTCCTC 60.041 72.222 0.00 0.00 0.00 3.71
8548 9511 2.641746 CCCCTCCCTCCACTCCTCT 61.642 68.421 0.00 0.00 0.00 3.69
8549 9512 1.075600 CCCTCCCTCCACTCCTCTC 60.076 68.421 0.00 0.00 0.00 3.20
8550 9513 1.075600 CCTCCCTCCACTCCTCTCC 60.076 68.421 0.00 0.00 0.00 3.71
8551 9514 1.589399 CCTCCCTCCACTCCTCTCCT 61.589 65.000 0.00 0.00 0.00 3.69
8552 9515 0.106217 CTCCCTCCACTCCTCTCCTC 60.106 65.000 0.00 0.00 0.00 3.71
8553 9516 0.553862 TCCCTCCACTCCTCTCCTCT 60.554 60.000 0.00 0.00 0.00 3.69
8554 9517 0.106217 CCCTCCACTCCTCTCCTCTC 60.106 65.000 0.00 0.00 0.00 3.20
8555 9518 0.465460 CCTCCACTCCTCTCCTCTCG 60.465 65.000 0.00 0.00 0.00 4.04
8556 9519 0.254747 CTCCACTCCTCTCCTCTCGT 59.745 60.000 0.00 0.00 0.00 4.18
8557 9520 0.034960 TCCACTCCTCTCCTCTCGTG 60.035 60.000 0.00 0.00 0.00 4.35
8558 9521 1.034838 CCACTCCTCTCCTCTCGTGG 61.035 65.000 0.00 0.00 36.36 4.94
8559 9522 1.379309 ACTCCTCTCCTCTCGTGGC 60.379 63.158 0.00 0.00 0.00 5.01
8560 9523 2.438614 TCCTCTCCTCTCGTGGCG 60.439 66.667 0.00 0.00 0.00 5.69
8561 9524 3.522731 CCTCTCCTCTCGTGGCGG 61.523 72.222 0.00 0.00 0.00 6.13
8562 9525 4.200283 CTCTCCTCTCGTGGCGGC 62.200 72.222 0.00 0.00 0.00 6.53
8633 9833 4.785512 CACTCGCCGCGCTTCTCT 62.786 66.667 8.21 0.00 0.00 3.10
8639 9839 2.202676 CCGCGCTTCTCTGAGGTC 60.203 66.667 5.56 0.00 0.00 3.85
8640 9840 2.705821 CCGCGCTTCTCTGAGGTCT 61.706 63.158 5.56 0.00 0.00 3.85
8642 9842 1.653094 CGCGCTTCTCTGAGGTCTCT 61.653 60.000 5.56 0.00 0.00 3.10
8644 9844 1.750193 CGCTTCTCTGAGGTCTCTCT 58.250 55.000 4.59 0.00 40.58 3.10
8645 9845 1.670811 CGCTTCTCTGAGGTCTCTCTC 59.329 57.143 4.59 0.00 40.58 3.20
8648 9848 3.370953 GCTTCTCTGAGGTCTCTCTCTCT 60.371 52.174 4.59 0.00 40.58 3.10
8650 9850 3.724478 TCTCTGAGGTCTCTCTCTCTCT 58.276 50.000 4.59 0.00 40.58 3.10
8652 9852 3.708631 CTCTGAGGTCTCTCTCTCTCTCT 59.291 52.174 0.00 0.00 40.58 3.10
8653 9853 3.706594 TCTGAGGTCTCTCTCTCTCTCTC 59.293 52.174 0.00 0.00 40.58 3.20
8654 9854 3.708631 CTGAGGTCTCTCTCTCTCTCTCT 59.291 52.174 0.00 0.00 40.58 3.10
8655 9855 3.706594 TGAGGTCTCTCTCTCTCTCTCTC 59.293 52.174 0.00 0.00 40.58 3.20
8656 9856 3.964031 GAGGTCTCTCTCTCTCTCTCTCT 59.036 52.174 0.00 0.00 37.07 3.10
8657 9857 3.964031 AGGTCTCTCTCTCTCTCTCTCTC 59.036 52.174 0.00 0.00 0.00 3.20
8658 9858 3.964031 GGTCTCTCTCTCTCTCTCTCTCT 59.036 52.174 0.00 0.00 0.00 3.10
8659 9859 4.038642 GGTCTCTCTCTCTCTCTCTCTCTC 59.961 54.167 0.00 0.00 0.00 3.20
8660 9860 4.892934 GTCTCTCTCTCTCTCTCTCTCTCT 59.107 50.000 0.00 0.00 0.00 3.10
8661 9861 5.009610 GTCTCTCTCTCTCTCTCTCTCTCTC 59.990 52.000 0.00 0.00 0.00 3.20
8662 9862 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
8663 9863 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
8664 9864 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
8665 9865 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
8666 9866 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
8667 9867 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
8668 9868 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
8669 9869 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
8670 9870 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
8677 9877 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
8688 9888 3.118775 TCTCTCTCTCTCTCTCTCGGTTG 60.119 52.174 0.00 0.00 0.00 3.77
8716 9916 2.982488 AGGGAGGAGATGTGAACTGTTT 59.018 45.455 0.00 0.00 0.00 2.83
8744 9947 0.391793 CCCTCTTCTGACGCCCTTTC 60.392 60.000 0.00 0.00 0.00 2.62
8746 9949 0.737715 CTCTTCTGACGCCCTTTCGG 60.738 60.000 0.00 0.00 0.00 4.30
8769 9972 3.616379 GCTTCTTCGAGTTCTTCAGGATG 59.384 47.826 0.00 0.00 37.54 3.51
8838 10041 1.446966 GAGCACCGAAGAGACAGCC 60.447 63.158 0.00 0.00 0.00 4.85
8875 10078 1.268079 GCCTTGTGAGGTGCTTTTCTC 59.732 52.381 0.00 0.00 45.44 2.87
8876 10079 1.532868 CCTTGTGAGGTGCTTTTCTCG 59.467 52.381 0.00 0.00 38.32 4.04
8877 10080 0.944386 TTGTGAGGTGCTTTTCTCGC 59.056 50.000 0.00 0.00 39.99 5.03
8886 10089 1.068333 TGCTTTTCTCGCCTGATTTGC 60.068 47.619 0.00 0.00 0.00 3.68
8892 10095 4.851114 CGCCTGATTTGCGCGTCG 62.851 66.667 8.43 0.00 46.01 5.12
8896 10099 0.587242 CCTGATTTGCGCGTCGATTG 60.587 55.000 8.43 0.00 0.00 2.67
8898 10101 1.295357 TGATTTGCGCGTCGATTGGT 61.295 50.000 8.43 0.00 0.00 3.67
8900 10108 2.849142 ATTTGCGCGTCGATTGGTGC 62.849 55.000 8.43 11.25 39.98 5.01
8921 10129 3.614390 GCTAACCTTGTACGCTCTGAGTT 60.614 47.826 6.53 0.00 0.00 3.01
8923 10131 2.755650 ACCTTGTACGCTCTGAGTTTG 58.244 47.619 6.53 0.00 0.00 2.93
8925 10133 3.131396 CCTTGTACGCTCTGAGTTTGTT 58.869 45.455 6.53 0.00 0.00 2.83
8926 10134 4.202182 ACCTTGTACGCTCTGAGTTTGTTA 60.202 41.667 6.53 0.00 0.00 2.41
8928 10136 5.408604 CCTTGTACGCTCTGAGTTTGTTATT 59.591 40.000 6.53 0.00 0.00 1.40
8929 10137 6.401153 CCTTGTACGCTCTGAGTTTGTTATTC 60.401 42.308 6.53 0.00 0.00 1.75
8930 10138 5.779922 TGTACGCTCTGAGTTTGTTATTCT 58.220 37.500 6.53 0.00 0.00 2.40
8931 10139 5.862323 TGTACGCTCTGAGTTTGTTATTCTC 59.138 40.000 6.53 0.00 0.00 2.87
8932 10140 5.140747 ACGCTCTGAGTTTGTTATTCTCT 57.859 39.130 6.53 0.00 0.00 3.10
8933 10141 4.926238 ACGCTCTGAGTTTGTTATTCTCTG 59.074 41.667 6.53 0.00 0.00 3.35
8934 10142 5.164233 CGCTCTGAGTTTGTTATTCTCTGA 58.836 41.667 6.53 0.00 35.81 3.27
8937 10145 7.489435 CGCTCTGAGTTTGTTATTCTCTGATTA 59.511 37.037 6.53 0.00 36.28 1.75
8938 10146 8.599774 GCTCTGAGTTTGTTATTCTCTGATTAC 58.400 37.037 6.53 0.00 36.28 1.89
8939 10147 9.092876 CTCTGAGTTTGTTATTCTCTGATTACC 57.907 37.037 0.00 0.00 36.28 2.85
8940 10148 8.041323 TCTGAGTTTGTTATTCTCTGATTACCC 58.959 37.037 0.00 0.00 33.55 3.69
8941 10149 7.685481 TGAGTTTGTTATTCTCTGATTACCCA 58.315 34.615 0.00 0.00 0.00 4.51
8942 10150 8.160765 TGAGTTTGTTATTCTCTGATTACCCAA 58.839 33.333 0.00 0.00 0.00 4.12
8943 10151 8.336801 AGTTTGTTATTCTCTGATTACCCAAC 57.663 34.615 0.00 0.00 0.00 3.77
8944 10152 7.942341 AGTTTGTTATTCTCTGATTACCCAACA 59.058 33.333 0.00 0.00 0.00 3.33
8953 10166 2.295909 TGATTACCCAACACTTGCAAGC 59.704 45.455 26.27 5.89 0.00 4.01
8975 10190 2.493278 GCCTTGCTATTTCCTTTGAGCA 59.507 45.455 0.00 0.00 42.98 4.26
8980 10195 6.127647 CCTTGCTATTTCCTTTGAGCATGTTA 60.128 38.462 0.00 0.00 44.02 2.41
8982 10197 5.709631 TGCTATTTCCTTTGAGCATGTTACA 59.290 36.000 0.00 0.00 39.93 2.41
8992 10207 1.992557 AGCATGTTACAGAAAGGGGGA 59.007 47.619 0.00 0.00 0.00 4.81
8995 10210 3.769300 GCATGTTACAGAAAGGGGGAAAT 59.231 43.478 0.00 0.00 0.00 2.17
9009 10224 1.306148 GGAAATCCCCGGTTCGAATC 58.694 55.000 0.00 0.00 0.00 2.52
9010 10225 1.306148 GAAATCCCCGGTTCGAATCC 58.694 55.000 0.00 3.87 0.00 3.01
9015 10234 1.092348 CCCCGGTTCGAATCCTTTTC 58.908 55.000 0.00 0.00 0.00 2.29
9016 10235 0.725117 CCCGGTTCGAATCCTTTTCG 59.275 55.000 0.00 1.49 42.74 3.46
9018 10237 0.096454 CGGTTCGAATCCTTTTCGCC 59.904 55.000 0.00 0.00 41.30 5.54
9022 10241 2.178912 TCGAATCCTTTTCGCCAACT 57.821 45.000 3.01 0.00 41.30 3.16
9025 10244 3.869246 TCGAATCCTTTTCGCCAACTATC 59.131 43.478 3.01 0.00 41.30 2.08
9041 10260 5.454755 CCAACTATCCCACCTTATCGACAAT 60.455 44.000 0.00 0.00 0.00 2.71
9046 10265 5.272283 TCCCACCTTATCGACAATAACTC 57.728 43.478 0.00 0.00 0.00 3.01
9050 10269 6.373216 CCCACCTTATCGACAATAACTCAAAA 59.627 38.462 0.00 0.00 0.00 2.44
9051 10270 7.241376 CCACCTTATCGACAATAACTCAAAAC 58.759 38.462 0.00 0.00 0.00 2.43
9052 10271 7.119262 CCACCTTATCGACAATAACTCAAAACT 59.881 37.037 0.00 0.00 0.00 2.66
9054 10273 7.119262 ACCTTATCGACAATAACTCAAAACTGG 59.881 37.037 0.00 0.00 0.00 4.00
9055 10274 7.119262 CCTTATCGACAATAACTCAAAACTGGT 59.881 37.037 0.00 0.00 0.00 4.00
9056 10275 5.666969 TCGACAATAACTCAAAACTGGTG 57.333 39.130 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.954318 GCAGGGCATGTATCATGTCTTT 59.046 45.455 12.83 1.52 0.00 2.52
42 43 1.246056 TTGCCTGGCATGAGAACAGC 61.246 55.000 24.03 0.00 38.76 4.40
163 165 2.159310 AGTCACTATTGTCGCTCTCTGC 60.159 50.000 0.00 0.00 38.57 4.26
190 192 1.405526 CGTGAGGTCCAAATCGTCCAT 60.406 52.381 0.00 0.00 0.00 3.41
273 275 1.406205 GCTCAAGAACTGCTAGGGACC 60.406 57.143 0.00 0.00 0.00 4.46
699 702 0.102120 CAGAGATGAGCAGGGACGTC 59.898 60.000 7.13 7.13 0.00 4.34
720 724 2.150397 AAAGTGCTCGCTTACTTCGT 57.850 45.000 0.00 0.00 36.19 3.85
726 730 5.716094 TGTAACATCTAAAGTGCTCGCTTA 58.284 37.500 0.00 0.00 0.00 3.09
811 815 3.795688 TCAACTCCTCCAGCAAAATCT 57.204 42.857 0.00 0.00 0.00 2.40
812 816 3.760684 ACATCAACTCCTCCAGCAAAATC 59.239 43.478 0.00 0.00 0.00 2.17
813 817 3.771216 ACATCAACTCCTCCAGCAAAAT 58.229 40.909 0.00 0.00 0.00 1.82
814 818 3.228188 ACATCAACTCCTCCAGCAAAA 57.772 42.857 0.00 0.00 0.00 2.44
815 819 2.886523 CAACATCAACTCCTCCAGCAAA 59.113 45.455 0.00 0.00 0.00 3.68
816 820 2.106338 TCAACATCAACTCCTCCAGCAA 59.894 45.455 0.00 0.00 0.00 3.91
817 821 1.699083 TCAACATCAACTCCTCCAGCA 59.301 47.619 0.00 0.00 0.00 4.41
818 822 2.479566 TCAACATCAACTCCTCCAGC 57.520 50.000 0.00 0.00 0.00 4.85
819 823 6.881065 TCTTTATTCAACATCAACTCCTCCAG 59.119 38.462 0.00 0.00 0.00 3.86
820 824 6.778821 TCTTTATTCAACATCAACTCCTCCA 58.221 36.000 0.00 0.00 0.00 3.86
821 825 6.183360 GCTCTTTATTCAACATCAACTCCTCC 60.183 42.308 0.00 0.00 0.00 4.30
869 873 6.349860 GGAAACGGCAGGATGTAATAGTTTTT 60.350 38.462 0.00 0.00 39.31 1.94
870 874 5.124936 GGAAACGGCAGGATGTAATAGTTTT 59.875 40.000 0.00 0.00 39.31 2.43
871 875 4.638865 GGAAACGGCAGGATGTAATAGTTT 59.361 41.667 0.00 0.00 39.31 2.66
872 876 4.196971 GGAAACGGCAGGATGTAATAGTT 58.803 43.478 0.00 0.00 39.31 2.24
873 877 3.805207 GGAAACGGCAGGATGTAATAGT 58.195 45.455 0.00 0.00 39.31 2.12
1131 1136 4.200283 CGTGGAGGAGCCTCTCGC 62.200 72.222 15.64 11.20 42.38 5.03
1254 1259 4.547367 GCGGCCAGCGGGAAGTAT 62.547 66.667 7.23 0.00 35.59 2.12
1278 1283 0.620556 GAAATCTCCTCACCTGCCCA 59.379 55.000 0.00 0.00 0.00 5.36
1306 1311 1.152269 ACCCAGGGCAGCACAAATT 60.152 52.632 4.91 0.00 0.00 1.82
1349 1354 1.656818 AAATGCTGCGACCAATCCCG 61.657 55.000 0.00 0.00 0.00 5.14
1383 1388 0.108089 TTAGAACGGCCTAATGCGCA 60.108 50.000 14.96 14.96 42.61 6.09
1413 1418 3.110447 ACATTGTGGTTGAAATGGCAC 57.890 42.857 0.00 0.00 37.96 5.01
1462 1467 5.277345 GCGAACGCCTCTAAATCATGTAAAT 60.277 40.000 8.03 0.00 34.56 1.40
1479 1484 0.456653 ATGCCATTTTCAGCGAACGC 60.457 50.000 11.31 11.31 42.33 4.84
1480 1485 1.261989 CATGCCATTTTCAGCGAACG 58.738 50.000 0.00 0.00 0.00 3.95
1487 1492 5.050499 CGTAAAAAGTTGCATGCCATTTTCA 60.050 36.000 16.68 3.15 0.00 2.69
1503 1508 7.218963 GCCTTGCTGAGATTAAATCGTAAAAAG 59.781 37.037 0.00 0.00 0.00 2.27
1506 1511 5.880332 AGCCTTGCTGAGATTAAATCGTAAA 59.120 36.000 0.00 0.00 37.57 2.01
1510 1515 4.889832 AAGCCTTGCTGAGATTAAATCG 57.110 40.909 0.00 0.00 39.62 3.34
1524 1529 0.037303 TCCAGCTCCAGAAAGCCTTG 59.963 55.000 0.00 0.00 43.56 3.61
1548 1559 5.255687 TGCAAGTGAATGATTGACTACCAT 58.744 37.500 0.00 0.00 0.00 3.55
1549 1560 4.650734 TGCAAGTGAATGATTGACTACCA 58.349 39.130 0.00 0.00 0.00 3.25
1555 1566 3.570975 ACAGCTTGCAAGTGAATGATTGA 59.429 39.130 26.55 0.00 0.00 2.57
1562 1573 4.640201 AGAAAACTACAGCTTGCAAGTGAA 59.360 37.500 26.55 9.98 0.00 3.18
1565 1576 3.565902 GGAGAAAACTACAGCTTGCAAGT 59.434 43.478 26.55 11.44 0.00 3.16
1567 1578 2.884639 GGGAGAAAACTACAGCTTGCAA 59.115 45.455 0.00 0.00 0.00 4.08
1615 1627 7.826260 AATTCACAAGTTACAACAAAGTTGG 57.174 32.000 13.71 0.00 41.88 3.77
1617 1629 9.651913 ATGAAATTCACAAGTTACAACAAAGTT 57.348 25.926 0.00 0.00 0.00 2.66
1631 1643 3.252215 GGACGACCACATGAAATTCACAA 59.748 43.478 0.00 0.00 35.97 3.33
1648 1663 4.331968 AGTTTTAATTGCATCCTGGACGA 58.668 39.130 0.00 0.00 0.00 4.20
1649 1664 4.701956 AGTTTTAATTGCATCCTGGACG 57.298 40.909 0.00 0.00 0.00 4.79
1650 1665 6.151817 AGAGAAGTTTTAATTGCATCCTGGAC 59.848 38.462 0.00 0.00 0.00 4.02
1697 1712 2.409870 GGCAATGCCTCCAACCTCG 61.410 63.158 18.47 0.00 46.69 4.63
1793 1808 2.712077 GTTTGCGATTGAGCCAACG 58.288 52.632 0.00 0.00 34.02 4.10
1865 1881 4.033243 TCAGATGACGAAATGATCAAAGCG 59.967 41.667 0.00 6.20 0.00 4.68
1985 2001 6.866010 TTGACATTACCATCAGCATCATAC 57.134 37.500 0.00 0.00 0.00 2.39
2052 2068 7.056635 CCAGGAAGATACTATGACACCAAATT 58.943 38.462 0.00 0.00 0.00 1.82
2057 2073 5.336055 CGATCCAGGAAGATACTATGACACC 60.336 48.000 0.00 0.00 0.00 4.16
2065 2081 5.657302 ACTAACAACGATCCAGGAAGATACT 59.343 40.000 0.00 0.00 0.00 2.12
2075 2091 7.466185 CGGCATTATTAAACTAACAACGATCCA 60.466 37.037 0.00 0.00 0.00 3.41
2076 2092 6.849305 CGGCATTATTAAACTAACAACGATCC 59.151 38.462 0.00 0.00 0.00 3.36
2134 2150 1.004044 CCAATGAGCCTGTCCTCTGTT 59.996 52.381 0.00 0.00 33.02 3.16
2245 2261 6.528423 CGTCGTCCAATAGATTTATCTCATCC 59.472 42.308 0.00 0.00 38.32 3.51
2502 2518 5.745294 GCACTGCGAAATGAAACATTATGAT 59.255 36.000 0.00 0.00 0.00 2.45
2592 2608 7.542130 CCACCATCTTAAAAACATCTTTGCTAC 59.458 37.037 0.00 0.00 0.00 3.58
2635 2651 5.284861 TCAGTAGTACCTGAGTTTTTGCA 57.715 39.130 0.00 0.00 36.57 4.08
2683 2699 3.715628 ACAGGTTGCAAGCTTTGTTAG 57.284 42.857 27.77 17.52 33.87 2.34
2694 2710 6.265196 ACTCTGATTTGATAAAACAGGTTGCA 59.735 34.615 10.37 0.00 40.47 4.08
2695 2711 6.681777 ACTCTGATTTGATAAAACAGGTTGC 58.318 36.000 10.37 0.00 40.47 4.17
2696 2712 8.454106 CCTACTCTGATTTGATAAAACAGGTTG 58.546 37.037 10.37 8.49 40.47 3.77
2697 2713 7.611855 CCCTACTCTGATTTGATAAAACAGGTT 59.388 37.037 10.37 3.01 40.47 3.50
2698 2714 7.112779 CCCTACTCTGATTTGATAAAACAGGT 58.887 38.462 10.37 9.63 40.47 4.00
2699 2715 7.066284 CACCCTACTCTGATTTGATAAAACAGG 59.934 40.741 10.37 5.60 40.47 4.00
2700 2716 7.414540 GCACCCTACTCTGATTTGATAAAACAG 60.415 40.741 5.52 5.52 41.16 3.16
2701 2717 6.374333 GCACCCTACTCTGATTTGATAAAACA 59.626 38.462 0.00 0.00 0.00 2.83
2702 2718 6.374333 TGCACCCTACTCTGATTTGATAAAAC 59.626 38.462 0.00 0.00 0.00 2.43
2751 2782 4.015872 TGGAAGGTCTTTTCTACGCAAT 57.984 40.909 0.00 0.00 0.00 3.56
2759 2790 4.279420 ACAATGCTCTTGGAAGGTCTTTTC 59.721 41.667 4.90 0.00 0.00 2.29
2764 2795 6.058183 ACATATACAATGCTCTTGGAAGGTC 58.942 40.000 4.90 0.00 0.00 3.85
2796 2827 4.398319 ACCCCAGACATTTTGTAACTGAG 58.602 43.478 0.00 0.00 27.26 3.35
2812 2843 5.505181 AGCTATATAATTGTGGACCCCAG 57.495 43.478 0.00 0.00 32.34 4.45
2829 2860 7.941919 TGTAATCACGAGTCTTTGATAGCTAT 58.058 34.615 5.76 5.76 31.99 2.97
2841 2876 5.120363 GGTTTCTCCTTTGTAATCACGAGTC 59.880 44.000 0.00 0.00 0.00 3.36
2842 2877 4.995487 GGTTTCTCCTTTGTAATCACGAGT 59.005 41.667 0.00 0.00 0.00 4.18
2846 2881 5.048713 CCACTGGTTTCTCCTTTGTAATCAC 60.049 44.000 0.00 0.00 37.07 3.06
2874 2909 3.432252 AGACGTAATTTCTTGCTTCCACG 59.568 43.478 0.00 0.00 0.00 4.94
2875 2910 4.378459 CCAGACGTAATTTCTTGCTTCCAC 60.378 45.833 0.00 0.00 0.00 4.02
2878 2913 3.188460 TGCCAGACGTAATTTCTTGCTTC 59.812 43.478 0.00 0.00 33.81 3.86
2893 2929 2.126734 GTTGCGCATGTGCCAGAC 60.127 61.111 27.42 18.73 37.91 3.51
2942 2979 9.688592 AACTAATAGTACATCCACTATAAACGC 57.311 33.333 0.00 0.00 40.14 4.84
3053 3091 3.926527 TCTCATGCGTCAACACATCTTAC 59.073 43.478 0.00 0.00 0.00 2.34
3109 3259 7.381408 CGACAATATGCGGTTAAAAGAGAGATA 59.619 37.037 0.00 0.00 0.00 1.98
3124 3274 4.328983 ACCTTGTTTACTCGACAATATGCG 59.671 41.667 0.00 0.00 36.51 4.73
3134 3284 9.355215 CTAATATATGCCTACCTTGTTTACTCG 57.645 37.037 0.00 0.00 0.00 4.18
3190 3341 5.246203 TCCTGTCTATATATGCCAACTGGAC 59.754 44.000 0.00 0.00 37.39 4.02
3225 3376 4.664139 CGTGCGCATGTCTAATATAAGCAC 60.664 45.833 21.57 6.66 45.98 4.40
3228 3379 6.871044 ATACGTGCGCATGTCTAATATAAG 57.129 37.500 36.69 2.78 0.00 1.73
3229 3380 8.803799 CAATATACGTGCGCATGTCTAATATAA 58.196 33.333 36.69 18.46 0.00 0.98
3243 3395 3.060540 GTCATGTGGTCAATATACGTGCG 60.061 47.826 0.00 0.00 32.73 5.34
3251 3403 4.908601 AGTGGAAGTCATGTGGTCAATA 57.091 40.909 0.00 0.00 0.00 1.90
3344 3507 7.441157 TCAAATACTGCCTTGCACTACATATAC 59.559 37.037 0.00 0.00 33.79 1.47
3396 3560 7.495606 GTGACCATGTATTATCATTGTGAGACA 59.504 37.037 0.00 0.00 0.00 3.41
3474 3638 5.748402 TCCATGACAAGATATTTGAGCTGT 58.252 37.500 0.00 0.00 0.00 4.40
3507 3671 2.506231 TCAACTAACCTGACAACCACCA 59.494 45.455 0.00 0.00 0.00 4.17
3531 3695 4.464008 TGGAAGAACATCAAGCTTCAACT 58.536 39.130 0.00 0.00 39.72 3.16
3663 3831 6.605471 TGATACATACTAGGGTAGCCAATG 57.395 41.667 14.62 12.79 0.00 2.82
3715 3883 9.978044 TTGAATAATGATGTCAAATGTCAAACA 57.022 25.926 0.00 0.00 0.00 2.83
3717 3885 9.642327 CCTTGAATAATGATGTCAAATGTCAAA 57.358 29.630 0.00 0.00 31.21 2.69
3718 3886 8.805175 ACCTTGAATAATGATGTCAAATGTCAA 58.195 29.630 0.00 0.00 31.21 3.18
3719 3887 8.352137 ACCTTGAATAATGATGTCAAATGTCA 57.648 30.769 0.00 0.00 31.21 3.58
3720 3888 8.680903 AGACCTTGAATAATGATGTCAAATGTC 58.319 33.333 0.00 0.00 35.45 3.06
3721 3889 8.585471 AGACCTTGAATAATGATGTCAAATGT 57.415 30.769 0.00 0.00 31.21 2.71
3722 3890 9.512435 GAAGACCTTGAATAATGATGTCAAATG 57.488 33.333 0.00 0.00 31.21 2.32
3723 3891 8.400947 CGAAGACCTTGAATAATGATGTCAAAT 58.599 33.333 0.00 0.00 31.21 2.32
3776 3944 7.327975 TGATTAGTCGATCCAGTTACATTTGT 58.672 34.615 0.00 0.00 0.00 2.83
3843 4011 8.644374 AAATACAATCAGTAACCTTGGCTTTA 57.356 30.769 0.00 0.00 36.05 1.85
3865 4033 9.768662 TCGACTTTACTAAGACAAGGTAAAAAT 57.231 29.630 0.00 0.00 35.78 1.82
3880 4048 3.194116 AGGAAATGCGGTCGACTTTACTA 59.806 43.478 16.46 0.00 0.00 1.82
3894 4062 4.278419 ACTGAAGGTAACAACAGGAAATGC 59.722 41.667 8.62 0.00 43.12 3.56
3913 4081 0.467844 AGGTGGCATGTTGCAACTGA 60.468 50.000 28.61 11.56 46.34 3.41
3946 4114 7.173218 CGAGGTTATAACATACCAAATGAGCAT 59.827 37.037 17.16 0.00 36.87 3.79
3950 4118 7.332557 ACACGAGGTTATAACATACCAAATGA 58.667 34.615 17.16 0.00 36.87 2.57
3995 4163 8.083828 AGAACTAGAATGACATCACTGGTTAT 57.916 34.615 17.46 14.08 35.05 1.89
4046 4214 2.770904 TATTCGCCCCACCCCCTC 60.771 66.667 0.00 0.00 0.00 4.30
4047 4215 3.094498 GTATTCGCCCCACCCCCT 61.094 66.667 0.00 0.00 0.00 4.79
4048 4216 3.413300 TGTATTCGCCCCACCCCC 61.413 66.667 0.00 0.00 0.00 5.40
4049 4217 2.192175 CTGTATTCGCCCCACCCC 59.808 66.667 0.00 0.00 0.00 4.95
4050 4218 1.917336 TTCCTGTATTCGCCCCACCC 61.917 60.000 0.00 0.00 0.00 4.61
4051 4219 0.463833 CTTCCTGTATTCGCCCCACC 60.464 60.000 0.00 0.00 0.00 4.61
4052 4220 1.095807 GCTTCCTGTATTCGCCCCAC 61.096 60.000 0.00 0.00 0.00 4.61
4053 4221 1.223487 GCTTCCTGTATTCGCCCCA 59.777 57.895 0.00 0.00 0.00 4.96
4054 4222 1.526225 GGCTTCCTGTATTCGCCCC 60.526 63.158 0.00 0.00 34.75 5.80
4055 4223 0.756903 TAGGCTTCCTGTATTCGCCC 59.243 55.000 0.00 0.00 41.60 6.13
4056 4224 2.841442 ATAGGCTTCCTGTATTCGCC 57.159 50.000 0.00 0.00 40.99 5.54
4057 4225 5.054477 TGTTTATAGGCTTCCTGTATTCGC 58.946 41.667 0.00 0.00 34.61 4.70
4058 4226 7.548196 TTTGTTTATAGGCTTCCTGTATTCG 57.452 36.000 0.00 0.00 34.61 3.34
4062 4477 8.719596 TCCATATTTGTTTATAGGCTTCCTGTA 58.280 33.333 0.00 0.00 34.61 2.74
4085 4500 5.883115 TCGTTTCCAGCAATATGTATTTCCA 59.117 36.000 0.00 0.00 0.00 3.53
4165 4580 1.627864 TCACATCGAAGGTGTCTCCA 58.372 50.000 17.00 0.00 39.02 3.86
4166 4581 2.743636 TTCACATCGAAGGTGTCTCC 57.256 50.000 17.00 0.00 37.52 3.71
4581 5184 1.662608 CCTCGATCCTCCACCGATG 59.337 63.158 0.00 0.00 0.00 3.84
4582 5185 1.531840 CCCTCGATCCTCCACCGAT 60.532 63.158 0.00 0.00 0.00 4.18
4601 5204 2.176273 GGTCATACGCAGCTGCCTG 61.176 63.158 32.07 24.80 42.13 4.85
4609 5332 0.463654 GCCTCATTGGGTCATACGCA 60.464 55.000 0.00 0.00 39.39 5.24
4634 5360 4.423625 AATCTCCCAATCGTTTCCCTAG 57.576 45.455 0.00 0.00 0.00 3.02
4649 5377 9.668497 ATCTTAACACACCTAAACTTAATCTCC 57.332 33.333 0.00 0.00 0.00 3.71
4785 5513 0.250124 AGGAACACGTGCGGAAATGA 60.250 50.000 17.22 0.00 0.00 2.57
4787 5515 0.250124 TGAGGAACACGTGCGGAAAT 60.250 50.000 17.22 0.00 0.00 2.17
4822 5550 5.106442 GGAAACAGAAACGGAAACAAACAT 58.894 37.500 0.00 0.00 0.00 2.71
4910 5638 5.690464 AGCATCTAGATTAGGCCATTAGG 57.310 43.478 5.01 0.00 38.23 2.69
4911 5639 7.038659 GTGTAGCATCTAGATTAGGCCATTAG 58.961 42.308 5.01 0.00 0.00 1.73
4912 5640 6.496911 TGTGTAGCATCTAGATTAGGCCATTA 59.503 38.462 5.01 0.00 0.00 1.90
4913 5641 5.307976 TGTGTAGCATCTAGATTAGGCCATT 59.692 40.000 5.01 0.00 0.00 3.16
4914 5642 4.840680 TGTGTAGCATCTAGATTAGGCCAT 59.159 41.667 5.01 0.00 0.00 4.40
4915 5643 4.039245 GTGTGTAGCATCTAGATTAGGCCA 59.961 45.833 5.01 0.00 0.00 5.36
4916 5644 4.282195 AGTGTGTAGCATCTAGATTAGGCC 59.718 45.833 1.33 0.00 0.00 5.19
4917 5645 5.461032 AGTGTGTAGCATCTAGATTAGGC 57.539 43.478 1.33 3.87 0.00 3.93
4930 5658 5.041940 GGTATAGCTGTGTAAGTGTGTAGC 58.958 45.833 0.00 0.00 0.00 3.58
4960 5688 1.732941 TATGTTGGTGTGATGGACGC 58.267 50.000 0.00 0.00 0.00 5.19
4977 5705 6.600822 AGCATAACTGTCTCAACAAGCAATAT 59.399 34.615 0.00 0.00 34.24 1.28
5018 5746 7.288810 TCATTTTAACTTTCCAACTCAGCAT 57.711 32.000 0.00 0.00 0.00 3.79
5261 5989 7.659390 AGTCAAGTTAAGAGATGGAAGAAACAG 59.341 37.037 0.00 0.00 0.00 3.16
5267 5995 6.370166 GGAACAGTCAAGTTAAGAGATGGAAG 59.630 42.308 0.00 0.00 0.00 3.46
5268 5996 6.183361 TGGAACAGTCAAGTTAAGAGATGGAA 60.183 38.462 0.00 0.00 0.00 3.53
5270 5998 5.551233 TGGAACAGTCAAGTTAAGAGATGG 58.449 41.667 0.00 0.00 0.00 3.51
5451 6188 1.272313 ACCTGCAAGAAGATGCCATGT 60.272 47.619 0.00 0.00 45.83 3.21
5496 6233 7.235399 TGCTCTTGTGGGTTATCAGATATGATA 59.765 37.037 5.94 5.94 0.00 2.15
5544 6281 2.203938 GGAGGTGGTGGAGGTGGA 60.204 66.667 0.00 0.00 0.00 4.02
5577 6314 4.468868 TCCTTCTCATCTTGATCTTCTGCA 59.531 41.667 0.00 0.00 0.00 4.41
5610 6347 3.521126 CCTTTTCCTCCTCATCCTTCTCA 59.479 47.826 0.00 0.00 0.00 3.27
5659 6396 7.701539 AACAAATGAATAGGCATCAAGTACA 57.298 32.000 0.00 0.00 0.00 2.90
5919 6656 5.215160 GCAGTGTTGATGAGGTAAAACTTG 58.785 41.667 0.00 0.00 0.00 3.16
5938 6675 5.590259 ACAATCAAGTGTTTAGAGTTGCAGT 59.410 36.000 0.00 0.00 0.00 4.40
5947 6684 8.755018 GGAATGTTTGAACAATCAAGTGTTTAG 58.245 33.333 12.49 0.00 45.82 1.85
5948 6685 8.474025 AGGAATGTTTGAACAATCAAGTGTTTA 58.526 29.630 12.49 0.00 45.82 2.01
5983 6720 5.743026 TGCATAAAGAAACAAACACGAGA 57.257 34.783 0.00 0.00 0.00 4.04
6072 6809 7.033185 CAGTAAAATTAATGGAAAAGACCGGG 58.967 38.462 6.32 0.00 0.00 5.73
6122 6859 5.746990 GGTACCAAGCATAGGAGTGATAT 57.253 43.478 7.15 0.00 0.00 1.63
6204 6948 1.068474 GTGTCGCGTCAACAGCTAAT 58.932 50.000 7.80 0.00 0.00 1.73
6361 7105 2.093553 AGCAAATGTGGAGAGAGAGAGC 60.094 50.000 0.00 0.00 0.00 4.09
6441 7219 3.425858 GTCTCGCGGTAAGATAAATCTGC 59.574 47.826 6.13 0.00 37.19 4.26
6443 7221 5.067413 TGAAGTCTCGCGGTAAGATAAATCT 59.933 40.000 6.13 0.00 39.22 2.40
6449 7227 1.816835 TGTGAAGTCTCGCGGTAAGAT 59.183 47.619 6.13 0.00 34.60 2.40
6625 7403 9.895138 AAAAGATGGCAAATTCTAATGCTAAAT 57.105 25.926 0.00 0.00 42.20 1.40
6678 7464 2.029290 AGGTGTCTTACAAGGTACGCAG 60.029 50.000 0.00 0.00 0.00 5.18
6682 7468 4.820894 ATGGAGGTGTCTTACAAGGTAC 57.179 45.455 0.00 0.00 0.00 3.34
6694 7480 1.620822 GGAAGCACAAATGGAGGTGT 58.379 50.000 0.00 0.00 37.35 4.16
6717 7503 5.107133 GTCCATATAACGATGATTACCCGG 58.893 45.833 0.00 0.00 0.00 5.73
6718 7504 5.716094 TGTCCATATAACGATGATTACCCG 58.284 41.667 0.00 0.00 0.00 5.28
6818 7604 5.104735 GGATCTTGATGGTGGAAGTAGAACT 60.105 44.000 0.00 0.00 0.00 3.01
6824 7610 4.275810 CAATGGATCTTGATGGTGGAAGT 58.724 43.478 0.00 0.00 0.00 3.01
6952 7738 5.848286 TCCAGATTATAATGTCCTGGCAT 57.152 39.130 19.84 0.00 42.97 4.40
7187 7974 3.686227 TGATGGCCCAAGGATACATTT 57.314 42.857 0.00 0.00 41.41 2.32
7424 8224 4.906618 TGGTTTCCTACAGGTTTCAGATC 58.093 43.478 0.00 0.00 36.34 2.75
7524 8324 4.380550 GGCAGGTGTATCTTTTTAAGTGGC 60.381 45.833 0.00 0.00 0.00 5.01
7540 8340 2.414994 AGTGATGAAGATGGCAGGTG 57.585 50.000 0.00 0.00 0.00 4.00
7562 8362 3.637998 ACGGTATGTCGGTGCTTATAG 57.362 47.619 0.00 0.00 0.00 1.31
7682 8482 3.188786 GCGGTCTTAGTGGCAGCG 61.189 66.667 0.00 0.00 31.04 5.18
7685 8485 3.691342 AGCGCGGTCTTAGTGGCA 61.691 61.111 4.23 0.00 0.00 4.92
7747 8548 0.602372 CAAACAACAATTGGGCGGGG 60.602 55.000 10.83 0.00 34.12 5.73
7771 8572 3.005050 ACGAACGACTTGTATCACCAGAA 59.995 43.478 0.14 0.00 0.00 3.02
7776 8577 2.055838 TGCACGAACGACTTGTATCAC 58.944 47.619 0.14 0.00 0.00 3.06
7782 8583 3.788434 AATTACTGCACGAACGACTTG 57.212 42.857 0.14 0.00 0.00 3.16
7787 8588 1.969256 GCACAAATTACTGCACGAACG 59.031 47.619 0.00 0.00 33.31 3.95
7844 8646 0.721718 ATAAGAGCTGAAACGCACGC 59.278 50.000 0.00 0.00 0.00 5.34
7931 8733 2.961526 ACACGAAGTTATGCTCGGAT 57.038 45.000 0.00 0.00 41.61 4.18
8038 8840 5.183228 AGGAATGTTATTTAGTGACACCCG 58.817 41.667 0.84 0.00 31.69 5.28
8055 8857 8.586273 CGTATGCTTTACAAAAATGAAGGAATG 58.414 33.333 0.00 0.00 0.00 2.67
8124 8926 0.394938 ACATAACCACGCTGTCACCA 59.605 50.000 0.00 0.00 0.00 4.17
8199 9041 4.219115 TCCTTCCCACACTTAATTTTGCA 58.781 39.130 0.00 0.00 0.00 4.08
8206 9048 6.265876 GGTAACAATTTCCTTCCCACACTTAA 59.734 38.462 0.00 0.00 0.00 1.85
8269 9173 5.636123 TCTATTTTCAGGGTGCCTTTTGTA 58.364 37.500 0.00 0.00 0.00 2.41
8297 9232 1.446618 CTGGGCCGCAATTTTCTGC 60.447 57.895 0.00 0.00 39.04 4.26
8369 9304 1.283321 AGCAAGGTCTCCCCATTTCTC 59.717 52.381 0.00 0.00 34.66 2.87
8377 9312 2.206576 AAATGACAGCAAGGTCTCCC 57.793 50.000 5.06 0.00 38.61 4.30
8379 9314 6.089954 GCAAATAAAAATGACAGCAAGGTCTC 59.910 38.462 5.06 0.00 38.61 3.36
8413 9376 3.189285 GCGCCATAAAAATGACAGCATT 58.811 40.909 0.00 0.00 46.35 3.56
8414 9377 2.795681 CGCGCCATAAAAATGACAGCAT 60.796 45.455 0.00 0.00 35.92 3.79
8415 9378 1.467204 CGCGCCATAAAAATGACAGCA 60.467 47.619 0.00 0.00 0.00 4.41
8416 9379 1.191096 CGCGCCATAAAAATGACAGC 58.809 50.000 0.00 0.00 0.00 4.40
8417 9380 2.823196 TCGCGCCATAAAAATGACAG 57.177 45.000 0.00 0.00 0.00 3.51
8418 9381 2.414824 GGTTCGCGCCATAAAAATGACA 60.415 45.455 0.00 0.00 0.00 3.58
8419 9382 2.182014 GGTTCGCGCCATAAAAATGAC 58.818 47.619 0.00 0.00 0.00 3.06
8420 9383 1.202087 CGGTTCGCGCCATAAAAATGA 60.202 47.619 0.00 0.00 0.00 2.57
8421 9384 1.187715 CGGTTCGCGCCATAAAAATG 58.812 50.000 0.00 0.00 0.00 2.32
8422 9385 0.524604 GCGGTTCGCGCCATAAAAAT 60.525 50.000 0.00 0.00 44.55 1.82
8423 9386 1.154188 GCGGTTCGCGCCATAAAAA 60.154 52.632 0.00 0.00 44.55 1.94
8424 9387 2.481464 GCGGTTCGCGCCATAAAA 59.519 55.556 0.00 0.00 44.55 1.52
8498 9461 8.146412 GGTCTTCTGGTTTACTTTCTGTACTAA 58.854 37.037 0.00 0.00 0.00 2.24
8499 9462 7.256083 GGGTCTTCTGGTTTACTTTCTGTACTA 60.256 40.741 0.00 0.00 0.00 1.82
8500 9463 6.464039 GGGTCTTCTGGTTTACTTTCTGTACT 60.464 42.308 0.00 0.00 0.00 2.73
8501 9464 5.699915 GGGTCTTCTGGTTTACTTTCTGTAC 59.300 44.000 0.00 0.00 0.00 2.90
8502 9465 5.221783 GGGGTCTTCTGGTTTACTTTCTGTA 60.222 44.000 0.00 0.00 0.00 2.74
8503 9466 4.445879 GGGGTCTTCTGGTTTACTTTCTGT 60.446 45.833 0.00 0.00 0.00 3.41
8504 9467 4.072839 GGGGTCTTCTGGTTTACTTTCTG 58.927 47.826 0.00 0.00 0.00 3.02
8505 9468 3.074094 GGGGGTCTTCTGGTTTACTTTCT 59.926 47.826 0.00 0.00 0.00 2.52
8506 9469 3.418995 GGGGGTCTTCTGGTTTACTTTC 58.581 50.000 0.00 0.00 0.00 2.62
8507 9470 3.520691 GGGGGTCTTCTGGTTTACTTT 57.479 47.619 0.00 0.00 0.00 2.66
8529 9492 4.423209 AGGAGTGGAGGGAGGGGC 62.423 72.222 0.00 0.00 0.00 5.80
8530 9493 2.041405 GAGGAGTGGAGGGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
8531 9494 1.075600 GAGAGGAGTGGAGGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
8532 9495 1.075600 GGAGAGGAGTGGAGGGAGG 60.076 68.421 0.00 0.00 0.00 4.30
8533 9496 0.106217 GAGGAGAGGAGTGGAGGGAG 60.106 65.000 0.00 0.00 0.00 4.30
8534 9497 0.553862 AGAGGAGAGGAGTGGAGGGA 60.554 60.000 0.00 0.00 0.00 4.20
8535 9498 0.106217 GAGAGGAGAGGAGTGGAGGG 60.106 65.000 0.00 0.00 0.00 4.30
8536 9499 0.465460 CGAGAGGAGAGGAGTGGAGG 60.465 65.000 0.00 0.00 0.00 4.30
8537 9500 0.254747 ACGAGAGGAGAGGAGTGGAG 59.745 60.000 0.00 0.00 0.00 3.86
8538 9501 0.034960 CACGAGAGGAGAGGAGTGGA 60.035 60.000 0.00 0.00 0.00 4.02
8539 9502 1.034838 CCACGAGAGGAGAGGAGTGG 61.035 65.000 0.00 0.00 42.31 4.00
8540 9503 1.662438 GCCACGAGAGGAGAGGAGTG 61.662 65.000 0.00 0.00 0.00 3.51
8541 9504 1.379309 GCCACGAGAGGAGAGGAGT 60.379 63.158 0.00 0.00 0.00 3.85
8542 9505 2.477176 CGCCACGAGAGGAGAGGAG 61.477 68.421 0.00 0.00 0.00 3.69
8543 9506 2.438614 CGCCACGAGAGGAGAGGA 60.439 66.667 0.00 0.00 0.00 3.71
8544 9507 3.522731 CCGCCACGAGAGGAGAGG 61.523 72.222 0.00 0.00 0.00 3.69
8545 9508 4.200283 GCCGCCACGAGAGGAGAG 62.200 72.222 4.37 0.00 0.00 3.20
8633 9833 3.706594 GAGAGAGAGAGAGAGAGACCTCA 59.293 52.174 0.00 0.00 41.87 3.86
8639 9839 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
8640 9840 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8642 9842 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8644 9844 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8645 9845 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
8648 9848 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8650 9850 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8652 9852 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8653 9853 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
8654 9854 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8655 9855 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
8656 9856 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8657 9857 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
8658 9858 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
8659 9859 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
8660 9860 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
8661 9861 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
8662 9862 3.885901 CGAGAGAGAGAGAGAGAGAGAGA 59.114 52.174 0.00 0.00 0.00 3.10
8663 9863 3.005261 CCGAGAGAGAGAGAGAGAGAGAG 59.995 56.522 0.00 0.00 0.00 3.20
8664 9864 2.959030 CCGAGAGAGAGAGAGAGAGAGA 59.041 54.545 0.00 0.00 0.00 3.10
8665 9865 2.695666 ACCGAGAGAGAGAGAGAGAGAG 59.304 54.545 0.00 0.00 0.00 3.20
8666 9866 2.747177 ACCGAGAGAGAGAGAGAGAGA 58.253 52.381 0.00 0.00 0.00 3.10
8667 9867 3.198068 CAACCGAGAGAGAGAGAGAGAG 58.802 54.545 0.00 0.00 0.00 3.20
8668 9868 2.093181 CCAACCGAGAGAGAGAGAGAGA 60.093 54.545 0.00 0.00 0.00 3.10
8669 9869 2.288666 CCAACCGAGAGAGAGAGAGAG 58.711 57.143 0.00 0.00 0.00 3.20
8670 9870 1.065053 CCCAACCGAGAGAGAGAGAGA 60.065 57.143 0.00 0.00 0.00 3.10
8677 9877 4.148825 CCCGCCCAACCGAGAGAG 62.149 72.222 0.00 0.00 0.00 3.20
8688 9888 4.565850 ATCTCCTCCCTCCCGCCC 62.566 72.222 0.00 0.00 0.00 6.13
8744 9947 1.336887 TGAAGAACTCGAAGAAGCCCG 60.337 52.381 0.00 0.00 34.09 6.13
8746 9949 2.028930 TCCTGAAGAACTCGAAGAAGCC 60.029 50.000 0.00 0.00 34.09 4.35
8827 10030 4.821589 CGCCGGGGCTGTCTCTTC 62.822 72.222 5.22 0.00 39.32 2.87
8876 10079 2.309764 AATCGACGCGCAAATCAGGC 62.310 55.000 5.73 0.00 0.00 4.85
8877 10080 0.587242 CAATCGACGCGCAAATCAGG 60.587 55.000 5.73 0.00 0.00 3.86
8886 10089 1.343821 GTTAGCACCAATCGACGCG 59.656 57.895 3.53 3.53 0.00 6.01
8896 10099 1.067071 AGAGCGTACAAGGTTAGCACC 60.067 52.381 0.00 0.00 44.67 5.01
8898 10101 1.890489 TCAGAGCGTACAAGGTTAGCA 59.110 47.619 0.00 0.00 0.00 3.49
8900 10108 3.851976 ACTCAGAGCGTACAAGGTTAG 57.148 47.619 0.00 0.00 0.00 2.34
8906 10114 6.220930 AGAATAACAAACTCAGAGCGTACAA 58.779 36.000 0.00 0.00 0.00 2.41
8911 10119 5.164233 TCAGAGAATAACAAACTCAGAGCG 58.836 41.667 0.00 0.00 33.69 5.03
8921 10129 7.458397 AGTGTTGGGTAATCAGAGAATAACAA 58.542 34.615 0.00 0.00 0.00 2.83
8923 10131 7.626452 GCAAGTGTTGGGTAATCAGAGAATAAC 60.626 40.741 0.00 0.00 0.00 1.89
8925 10133 5.880332 GCAAGTGTTGGGTAATCAGAGAATA 59.120 40.000 0.00 0.00 0.00 1.75
8926 10134 4.702131 GCAAGTGTTGGGTAATCAGAGAAT 59.298 41.667 0.00 0.00 0.00 2.40
8928 10136 3.072330 TGCAAGTGTTGGGTAATCAGAGA 59.928 43.478 0.00 0.00 0.00 3.10
8929 10137 3.411446 TGCAAGTGTTGGGTAATCAGAG 58.589 45.455 0.00 0.00 0.00 3.35
8930 10138 3.500448 TGCAAGTGTTGGGTAATCAGA 57.500 42.857 0.00 0.00 0.00 3.27
8931 10139 3.612479 GCTTGCAAGTGTTGGGTAATCAG 60.612 47.826 26.55 0.00 0.00 2.90
8932 10140 2.295909 GCTTGCAAGTGTTGGGTAATCA 59.704 45.455 26.55 0.00 0.00 2.57
8933 10141 2.668279 CGCTTGCAAGTGTTGGGTAATC 60.668 50.000 28.01 6.98 0.00 1.75
8934 10142 1.269448 CGCTTGCAAGTGTTGGGTAAT 59.731 47.619 28.01 0.00 0.00 1.89
8937 10145 3.119193 CGCTTGCAAGTGTTGGGT 58.881 55.556 28.01 0.00 0.00 4.51
8938 10146 2.355009 GCGCTTGCAAGTGTTGGG 60.355 61.111 33.79 16.61 38.74 4.12
8939 10147 2.354074 AAGGCGCTTGCAAGTGTTGG 62.354 55.000 33.79 17.13 41.71 3.77
8940 10148 1.066257 AAGGCGCTTGCAAGTGTTG 59.934 52.632 33.79 19.71 41.71 3.33
8941 10149 1.066257 CAAGGCGCTTGCAAGTGTT 59.934 52.632 33.79 21.92 41.71 3.32
8942 10150 2.723746 CAAGGCGCTTGCAAGTGT 59.276 55.556 33.79 17.73 41.71 3.55
8953 10166 2.478539 GCTCAAAGGAAATAGCAAGGCG 60.479 50.000 0.00 0.00 35.05 5.52
8967 10182 4.082571 CCCCTTTCTGTAACATGCTCAAAG 60.083 45.833 0.00 0.00 0.00 2.77
8968 10183 3.826157 CCCCTTTCTGTAACATGCTCAAA 59.174 43.478 0.00 0.00 0.00 2.69
8970 10185 2.290896 CCCCCTTTCTGTAACATGCTCA 60.291 50.000 0.00 0.00 0.00 4.26
8975 10190 4.610333 GGATTTCCCCCTTTCTGTAACAT 58.390 43.478 0.00 0.00 0.00 2.71
8992 10207 0.916809 AGGATTCGAACCGGGGATTT 59.083 50.000 6.32 0.00 0.00 2.17
8995 10210 0.694196 AAAAGGATTCGAACCGGGGA 59.306 50.000 6.32 0.00 0.00 4.81
9005 10220 3.315470 GGGATAGTTGGCGAAAAGGATTC 59.685 47.826 0.00 0.00 0.00 2.52
9007 10222 2.241176 TGGGATAGTTGGCGAAAAGGAT 59.759 45.455 0.00 0.00 0.00 3.24
9009 10224 1.743394 GTGGGATAGTTGGCGAAAAGG 59.257 52.381 0.00 0.00 0.00 3.11
9010 10225 1.743394 GGTGGGATAGTTGGCGAAAAG 59.257 52.381 0.00 0.00 0.00 2.27
9015 10234 2.767505 GATAAGGTGGGATAGTTGGCG 58.232 52.381 0.00 0.00 0.00 5.69
9016 10235 2.367567 TCGATAAGGTGGGATAGTTGGC 59.632 50.000 0.00 0.00 0.00 4.52
9018 10237 4.665833 TGTCGATAAGGTGGGATAGTTG 57.334 45.455 0.00 0.00 0.00 3.16
9022 10241 6.551975 TGAGTTATTGTCGATAAGGTGGGATA 59.448 38.462 0.02 0.00 31.01 2.59
9025 10244 5.018539 TGAGTTATTGTCGATAAGGTGGG 57.981 43.478 0.02 0.00 31.01 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.