Multiple sequence alignment - TraesCS5A01G465800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G465800 chr5A 100.000 1462 0 0 1 1462 644446071 644444610 0.000000e+00 2700.0
1 TraesCS5A01G465800 chr5A 100.000 1241 0 0 1867 3107 644444205 644442965 0.000000e+00 2292.0
2 TraesCS5A01G465800 chr5A 85.047 642 51 24 739 1345 644456301 644455670 2.050000e-171 612.0
3 TraesCS5A01G465800 chr5A 84.041 589 59 18 769 1345 644501850 644501285 4.560000e-148 534.0
4 TraesCS5A01G465800 chr5A 82.650 634 75 19 748 1347 644358443 644359075 2.120000e-146 529.0
5 TraesCS5A01G465800 chr5A 86.427 361 47 2 2514 2873 330733186 330732827 8.080000e-106 394.0
6 TraesCS5A01G465800 chr6A 96.621 947 32 0 2161 3107 528356293 528357239 0.000000e+00 1572.0
7 TraesCS5A01G465800 chr6A 96.093 947 32 1 2161 3107 528578805 528579746 0.000000e+00 1539.0
8 TraesCS5A01G465800 chr6A 87.578 161 19 1 4 164 49465714 49465873 5.290000e-43 185.0
9 TraesCS5A01G465800 chr5B 86.667 1290 77 29 169 1427 649829757 649828532 0.000000e+00 1341.0
10 TraesCS5A01G465800 chr5B 83.102 722 51 32 739 1427 649859564 649858881 2.670000e-165 592.0
11 TraesCS5A01G465800 chr5B 83.489 642 63 20 748 1347 649729427 649730067 2.710000e-155 558.0
12 TraesCS5A01G465800 chr5B 82.353 646 65 18 748 1354 649540203 649540838 1.650000e-142 516.0
13 TraesCS5A01G465800 chr5B 93.684 190 11 1 2155 2343 591197022 591197211 1.820000e-72 283.0
14 TraesCS5A01G465800 chr5B 91.000 100 9 0 1965 2064 674032191 674032092 5.400000e-28 135.0
15 TraesCS5A01G465800 chr5B 97.403 77 1 1 2161 2236 641818486 641818562 2.510000e-26 130.0
16 TraesCS5A01G465800 chr5D 83.670 643 61 21 748 1347 517270329 517270970 1.620000e-157 566.0
17 TraesCS5A01G465800 chr5D 83.333 636 60 16 748 1347 517317518 517318143 2.110000e-151 545.0
18 TraesCS5A01G465800 chr5D 93.151 292 9 4 1172 1462 517360046 517359765 4.790000e-113 418.0
19 TraesCS5A01G465800 chr5D 81.019 432 45 17 746 1141 517360471 517360041 3.010000e-80 309.0
20 TraesCS5A01G465800 chr5D 88.571 105 12 0 1965 2069 265543113 265543009 9.040000e-26 128.0
21 TraesCS5A01G465800 chr5D 89.109 101 11 0 1966 2066 442958216 442958316 3.250000e-25 126.0
22 TraesCS5A01G465800 chr1B 97.348 264 7 0 2161 2424 631776100 631775837 1.700000e-122 449.0
23 TraesCS5A01G465800 chr1B 84.375 160 24 1 2 161 601426510 601426352 4.150000e-34 156.0
24 TraesCS5A01G465800 chr1B 96.970 66 2 0 2418 2483 631768327 631768262 9.110000e-21 111.0
25 TraesCS5A01G465800 chr3D 90.909 143 11 1 2162 2304 301578958 301579098 1.140000e-44 191.0
26 TraesCS5A01G465800 chr3D 88.776 98 10 1 1965 2062 159503094 159503190 5.440000e-23 119.0
27 TraesCS5A01G465800 chr3D 88.119 101 11 1 1965 2065 415898713 415898614 5.440000e-23 119.0
28 TraesCS5A01G465800 chr3D 91.667 60 5 0 388 447 38194621 38194562 1.990000e-12 84.2
29 TraesCS5A01G465800 chr3D 90.000 60 6 0 388 447 313824057 313824116 9.240000e-11 78.7
30 TraesCS5A01G465800 chr1D 91.753 97 8 0 1966 2062 466481117 466481213 5.400000e-28 135.0
31 TraesCS5A01G465800 chr7B 90.722 97 9 0 1966 2062 103565054 103565150 2.510000e-26 130.0
32 TraesCS5A01G465800 chr7B 91.525 59 5 0 389 447 483892395 483892337 7.140000e-12 82.4
33 TraesCS5A01G465800 chr6B 90.000 100 10 0 1965 2064 262532391 262532292 2.510000e-26 130.0
34 TraesCS5A01G465800 chr7D 88.119 101 11 1 1965 2065 185575013 185574914 5.440000e-23 119.0
35 TraesCS5A01G465800 chr7D 81.301 123 13 10 32 149 274376825 274376708 1.190000e-14 91.6
36 TraesCS5A01G465800 chr7A 89.024 82 7 2 2160 2241 57693237 57693316 1.970000e-17 100.0
37 TraesCS5A01G465800 chr3A 91.935 62 5 0 386 447 648570603 648570664 1.530000e-13 87.9
38 TraesCS5A01G465800 chr2A 91.803 61 5 0 388 448 701368074 701368014 5.520000e-13 86.1
39 TraesCS5A01G465800 chr2A 91.667 60 5 0 388 447 629373876 629373935 1.990000e-12 84.2
40 TraesCS5A01G465800 chr4A 91.667 60 5 0 388 447 153665371 153665430 1.990000e-12 84.2
41 TraesCS5A01G465800 chr4A 91.379 58 5 0 390 447 614551255 614551198 2.570000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G465800 chr5A 644442965 644446071 3106 True 2496.0 2700 100.000 1 3107 2 chr5A.!!$R4 3106
1 TraesCS5A01G465800 chr5A 644455670 644456301 631 True 612.0 612 85.047 739 1345 1 chr5A.!!$R2 606
2 TraesCS5A01G465800 chr5A 644501285 644501850 565 True 534.0 534 84.041 769 1345 1 chr5A.!!$R3 576
3 TraesCS5A01G465800 chr5A 644358443 644359075 632 False 529.0 529 82.650 748 1347 1 chr5A.!!$F1 599
4 TraesCS5A01G465800 chr6A 528356293 528357239 946 False 1572.0 1572 96.621 2161 3107 1 chr6A.!!$F2 946
5 TraesCS5A01G465800 chr6A 528578805 528579746 941 False 1539.0 1539 96.093 2161 3107 1 chr6A.!!$F3 946
6 TraesCS5A01G465800 chr5B 649828532 649829757 1225 True 1341.0 1341 86.667 169 1427 1 chr5B.!!$R1 1258
7 TraesCS5A01G465800 chr5B 649858881 649859564 683 True 592.0 592 83.102 739 1427 1 chr5B.!!$R2 688
8 TraesCS5A01G465800 chr5B 649729427 649730067 640 False 558.0 558 83.489 748 1347 1 chr5B.!!$F4 599
9 TraesCS5A01G465800 chr5B 649540203 649540838 635 False 516.0 516 82.353 748 1354 1 chr5B.!!$F3 606
10 TraesCS5A01G465800 chr5D 517270329 517270970 641 False 566.0 566 83.670 748 1347 1 chr5D.!!$F2 599
11 TraesCS5A01G465800 chr5D 517317518 517318143 625 False 545.0 545 83.333 748 1347 1 chr5D.!!$F3 599
12 TraesCS5A01G465800 chr5D 517359765 517360471 706 True 363.5 418 87.085 746 1462 2 chr5D.!!$R2 716

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
293 303 0.107993 GCTGCCAGATCTAGCACACA 60.108 55.0 12.07 0.00 37.40 3.72 F
991 1086 0.521291 AATACACACACACGCCATGC 59.479 50.0 0.00 0.00 0.00 4.06 F
1439 1563 0.172352 TGCACATCAGCACATGCATG 59.828 50.0 25.09 25.09 42.92 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1281 1404 0.108138 CGATGAACTCGGAGGCCTTT 60.108 55.0 6.77 0.0 43.82 3.11 R
1903 2027 0.173708 GGCCACGTGGAAACAACAAA 59.826 50.0 38.30 0.0 46.06 2.83 R
2470 2594 0.604780 CCTGACAGTGGAGCCAACAG 60.605 60.0 0.93 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.721087 AACACCCCAGAGGAAACATAG 57.279 47.619 0.00 0.00 39.89 2.23
21 22 1.282157 ACACCCCAGAGGAAACATAGC 59.718 52.381 0.00 0.00 39.89 2.97
22 23 0.919710 ACCCCAGAGGAAACATAGCC 59.080 55.000 0.00 0.00 39.89 3.93
23 24 1.216990 CCCCAGAGGAAACATAGCCT 58.783 55.000 0.00 0.00 38.24 4.58
38 39 2.752238 CCTCAGGGCTCGAGACGT 60.752 66.667 18.75 13.34 31.84 4.34
39 40 1.451567 CCTCAGGGCTCGAGACGTA 60.452 63.158 18.75 0.51 31.84 3.57
40 41 1.440938 CCTCAGGGCTCGAGACGTAG 61.441 65.000 18.75 11.32 31.84 3.51
41 42 1.440938 CTCAGGGCTCGAGACGTAGG 61.441 65.000 18.75 7.29 31.84 3.18
42 43 2.124236 AGGGCTCGAGACGTAGGG 60.124 66.667 18.75 0.00 0.00 3.53
43 44 2.439883 GGGCTCGAGACGTAGGGT 60.440 66.667 18.75 0.00 0.00 4.34
44 45 2.479750 GGGCTCGAGACGTAGGGTC 61.480 68.421 18.75 0.00 46.45 4.46
59 60 3.294904 GGTCTTTACCCCTCCGAGA 57.705 57.895 0.00 0.00 40.21 4.04
60 61 1.112950 GGTCTTTACCCCTCCGAGAG 58.887 60.000 0.00 0.00 40.21 3.20
73 74 1.803943 CGAGAGGGACCTGAACTCG 59.196 63.158 11.84 11.84 42.77 4.18
74 75 0.961358 CGAGAGGGACCTGAACTCGT 60.961 60.000 15.76 0.00 43.19 4.18
75 76 1.678123 CGAGAGGGACCTGAACTCGTA 60.678 57.143 15.76 0.00 43.19 3.43
76 77 2.444421 GAGAGGGACCTGAACTCGTAA 58.556 52.381 0.00 0.00 36.40 3.18
77 78 2.824341 GAGAGGGACCTGAACTCGTAAA 59.176 50.000 0.00 0.00 36.40 2.01
78 79 3.236896 AGAGGGACCTGAACTCGTAAAA 58.763 45.455 0.00 0.00 36.40 1.52
79 80 3.838903 AGAGGGACCTGAACTCGTAAAAT 59.161 43.478 0.00 0.00 36.40 1.82
80 81 4.081586 AGAGGGACCTGAACTCGTAAAATC 60.082 45.833 0.00 0.00 36.40 2.17
81 82 3.055312 AGGGACCTGAACTCGTAAAATCC 60.055 47.826 0.00 0.00 0.00 3.01
82 83 2.928116 GGACCTGAACTCGTAAAATCCG 59.072 50.000 0.00 0.00 0.00 4.18
83 84 3.367703 GGACCTGAACTCGTAAAATCCGA 60.368 47.826 0.00 0.00 0.00 4.55
91 92 3.571571 CTCGTAAAATCCGAGTGTCACA 58.428 45.455 5.62 0.00 45.09 3.58
92 93 3.311106 TCGTAAAATCCGAGTGTCACAC 58.689 45.455 0.00 0.00 34.10 3.82
93 94 2.410730 CGTAAAATCCGAGTGTCACACC 59.589 50.000 3.66 0.00 34.49 4.16
94 95 2.930826 AAAATCCGAGTGTCACACCT 57.069 45.000 3.66 0.00 34.49 4.00
95 96 2.930826 AAATCCGAGTGTCACACCTT 57.069 45.000 3.66 0.00 34.49 3.50
96 97 2.457366 AATCCGAGTGTCACACCTTC 57.543 50.000 3.66 0.00 34.49 3.46
97 98 0.243907 ATCCGAGTGTCACACCTTCG 59.756 55.000 11.64 11.64 34.49 3.79
98 99 2.022129 CCGAGTGTCACACCTTCGC 61.022 63.158 12.85 0.00 33.01 4.70
99 100 2.022129 CGAGTGTCACACCTTCGCC 61.022 63.158 3.66 0.00 34.49 5.54
100 101 2.022129 GAGTGTCACACCTTCGCCG 61.022 63.158 3.66 0.00 34.49 6.46
101 102 2.279918 GTGTCACACCTTCGCCGT 60.280 61.111 0.00 0.00 0.00 5.68
102 103 1.007038 GTGTCACACCTTCGCCGTA 60.007 57.895 0.00 0.00 0.00 4.02
103 104 1.007336 GTGTCACACCTTCGCCGTAG 61.007 60.000 0.00 0.00 0.00 3.51
104 105 2.092882 GTCACACCTTCGCCGTAGC 61.093 63.158 0.00 0.00 0.00 3.58
105 106 2.261671 CACACCTTCGCCGTAGCT 59.738 61.111 0.00 0.00 36.60 3.32
106 107 0.961857 TCACACCTTCGCCGTAGCTA 60.962 55.000 0.00 0.00 36.60 3.32
107 108 0.525668 CACACCTTCGCCGTAGCTAG 60.526 60.000 0.00 0.00 36.60 3.42
108 109 1.065928 CACCTTCGCCGTAGCTAGG 59.934 63.158 6.46 6.46 41.68 3.02
109 110 1.379576 ACCTTCGCCGTAGCTAGGT 60.380 57.895 12.21 4.52 43.15 3.08
110 111 0.969409 ACCTTCGCCGTAGCTAGGTT 60.969 55.000 12.21 0.00 44.62 3.50
111 112 0.248949 CCTTCGCCGTAGCTAGGTTC 60.249 60.000 12.21 0.00 35.09 3.62
112 113 0.248949 CTTCGCCGTAGCTAGGTTCC 60.249 60.000 12.21 0.35 36.60 3.62
113 114 0.966875 TTCGCCGTAGCTAGGTTCCA 60.967 55.000 12.21 0.00 36.60 3.53
114 115 1.226888 CGCCGTAGCTAGGTTCCAC 60.227 63.158 12.21 0.00 36.60 4.02
115 116 1.143401 GCCGTAGCTAGGTTCCACC 59.857 63.158 12.21 0.00 35.46 4.61
116 117 1.821258 CCGTAGCTAGGTTCCACCC 59.179 63.158 12.21 0.00 39.75 4.61
117 118 1.683418 CCGTAGCTAGGTTCCACCCC 61.683 65.000 12.21 0.00 39.75 4.95
118 119 0.686769 CGTAGCTAGGTTCCACCCCT 60.687 60.000 0.00 0.00 39.75 4.79
119 120 1.410648 CGTAGCTAGGTTCCACCCCTA 60.411 57.143 0.00 0.00 39.75 3.53
120 121 2.755549 CGTAGCTAGGTTCCACCCCTAT 60.756 54.545 0.00 0.00 39.75 2.57
121 122 2.588925 AGCTAGGTTCCACCCCTATT 57.411 50.000 0.00 0.00 39.75 1.73
122 123 2.859951 AGCTAGGTTCCACCCCTATTT 58.140 47.619 0.00 0.00 39.75 1.40
123 124 2.778270 AGCTAGGTTCCACCCCTATTTC 59.222 50.000 0.00 0.00 39.75 2.17
124 125 2.484947 GCTAGGTTCCACCCCTATTTCG 60.485 54.545 0.00 0.00 39.75 3.46
125 126 1.665137 AGGTTCCACCCCTATTTCGT 58.335 50.000 0.00 0.00 39.75 3.85
126 127 2.836667 AGGTTCCACCCCTATTTCGTA 58.163 47.619 0.00 0.00 39.75 3.43
127 128 2.502947 AGGTTCCACCCCTATTTCGTAC 59.497 50.000 0.00 0.00 39.75 3.67
128 129 2.420547 GGTTCCACCCCTATTTCGTACC 60.421 54.545 0.00 0.00 30.04 3.34
129 130 1.499368 TCCACCCCTATTTCGTACCC 58.501 55.000 0.00 0.00 0.00 3.69
130 131 0.471191 CCACCCCTATTTCGTACCCC 59.529 60.000 0.00 0.00 0.00 4.95
131 132 1.503800 CACCCCTATTTCGTACCCCT 58.496 55.000 0.00 0.00 0.00 4.79
132 133 2.681422 CACCCCTATTTCGTACCCCTA 58.319 52.381 0.00 0.00 0.00 3.53
133 134 2.631545 CACCCCTATTTCGTACCCCTAG 59.368 54.545 0.00 0.00 0.00 3.02
134 135 2.248423 ACCCCTATTTCGTACCCCTAGT 59.752 50.000 0.00 0.00 0.00 2.57
135 136 3.467103 ACCCCTATTTCGTACCCCTAGTA 59.533 47.826 0.00 0.00 0.00 1.82
136 137 3.829026 CCCCTATTTCGTACCCCTAGTAC 59.171 52.174 0.00 0.00 46.74 2.73
147 148 4.942363 ACCCCTAGTACTTACTGTCAGA 57.058 45.455 6.91 0.00 37.10 3.27
148 149 5.469210 ACCCCTAGTACTTACTGTCAGAT 57.531 43.478 6.91 0.00 37.10 2.90
149 150 5.840081 ACCCCTAGTACTTACTGTCAGATT 58.160 41.667 6.91 0.00 37.10 2.40
150 151 5.892686 ACCCCTAGTACTTACTGTCAGATTC 59.107 44.000 6.91 0.00 37.10 2.52
151 152 5.892119 CCCCTAGTACTTACTGTCAGATTCA 59.108 44.000 6.91 0.00 37.10 2.57
152 153 6.551601 CCCCTAGTACTTACTGTCAGATTCAT 59.448 42.308 6.91 0.00 37.10 2.57
153 154 7.070074 CCCCTAGTACTTACTGTCAGATTCATT 59.930 40.741 6.91 0.00 37.10 2.57
154 155 7.923344 CCCTAGTACTTACTGTCAGATTCATTG 59.077 40.741 6.91 0.00 37.10 2.82
155 156 7.436673 CCTAGTACTTACTGTCAGATTCATTGC 59.563 40.741 6.91 0.00 37.10 3.56
156 157 6.109359 AGTACTTACTGTCAGATTCATTGCC 58.891 40.000 6.91 0.00 34.72 4.52
157 158 5.171339 ACTTACTGTCAGATTCATTGCCT 57.829 39.130 6.91 0.00 0.00 4.75
158 159 5.181748 ACTTACTGTCAGATTCATTGCCTC 58.818 41.667 6.91 0.00 0.00 4.70
159 160 2.625737 ACTGTCAGATTCATTGCCTCG 58.374 47.619 6.91 0.00 0.00 4.63
160 161 2.234661 ACTGTCAGATTCATTGCCTCGA 59.765 45.455 6.91 0.00 0.00 4.04
161 162 2.606725 CTGTCAGATTCATTGCCTCGAC 59.393 50.000 0.00 0.00 0.00 4.20
162 163 2.028203 TGTCAGATTCATTGCCTCGACA 60.028 45.455 0.00 0.00 0.00 4.35
163 164 2.606725 GTCAGATTCATTGCCTCGACAG 59.393 50.000 0.00 0.00 0.00 3.51
164 165 1.329906 CAGATTCATTGCCTCGACAGC 59.670 52.381 0.00 0.00 0.00 4.40
165 166 0.659957 GATTCATTGCCTCGACAGCC 59.340 55.000 0.46 0.00 0.00 4.85
166 167 1.091771 ATTCATTGCCTCGACAGCCG 61.092 55.000 0.46 0.00 40.25 5.52
167 168 2.434884 CATTGCCTCGACAGCCGT 60.435 61.111 0.46 0.00 39.75 5.68
183 184 2.741092 GTCGTTGGAGCCACCTCA 59.259 61.111 0.00 0.00 39.96 3.86
197 198 2.190578 CTCAAGGATCCGCCCACC 59.809 66.667 5.98 0.00 37.37 4.61
199 200 1.987807 CTCAAGGATCCGCCCACCAT 61.988 60.000 5.98 0.00 37.37 3.55
204 205 1.224592 GATCCGCCCACCATGTCTT 59.775 57.895 0.00 0.00 0.00 3.01
205 206 0.468226 GATCCGCCCACCATGTCTTA 59.532 55.000 0.00 0.00 0.00 2.10
206 207 1.072331 GATCCGCCCACCATGTCTTAT 59.928 52.381 0.00 0.00 0.00 1.73
226 235 3.681909 GGTTGCCACCCCAGAATTA 57.318 52.632 0.00 0.00 37.03 1.40
243 253 2.157640 TTATCACCTTTGCCCCCATG 57.842 50.000 0.00 0.00 0.00 3.66
244 254 0.396974 TATCACCTTTGCCCCCATGC 60.397 55.000 0.00 0.00 0.00 4.06
245 255 2.458969 ATCACCTTTGCCCCCATGCA 62.459 55.000 0.00 0.00 40.07 3.96
246 256 1.991167 CACCTTTGCCCCCATGCAT 60.991 57.895 0.00 0.00 41.70 3.96
267 277 2.124983 CGTGACCATGCCCCTCAG 60.125 66.667 0.00 0.00 0.00 3.35
287 297 2.355599 CCGCGCTGCCAGATCTAG 60.356 66.667 5.56 0.00 0.00 2.43
293 303 0.107993 GCTGCCAGATCTAGCACACA 60.108 55.000 12.07 0.00 37.40 3.72
305 315 3.208383 CACACACCCGCACTGCAA 61.208 61.111 1.11 0.00 0.00 4.08
320 330 2.860293 CAACGTCGCCACCATGAC 59.140 61.111 0.00 0.00 0.00 3.06
321 331 1.667830 CAACGTCGCCACCATGACT 60.668 57.895 0.00 0.00 32.93 3.41
354 364 4.002906 GGGATGTCAATGCCGATAAGTA 57.997 45.455 0.00 0.00 34.21 2.24
361 371 4.625742 GTCAATGCCGATAAGTACGCATAT 59.374 41.667 4.42 0.00 31.60 1.78
362 372 5.803461 GTCAATGCCGATAAGTACGCATATA 59.197 40.000 4.42 0.00 31.60 0.86
364 374 7.646526 GTCAATGCCGATAAGTACGCATATATA 59.353 37.037 4.42 0.00 31.60 0.86
365 375 7.860872 TCAATGCCGATAAGTACGCATATATAG 59.139 37.037 4.42 0.00 31.60 1.31
366 376 5.516996 TGCCGATAAGTACGCATATATAGC 58.483 41.667 0.00 0.00 0.00 2.97
367 377 4.916249 GCCGATAAGTACGCATATATAGCC 59.084 45.833 0.00 0.00 0.00 3.93
386 396 4.459089 GAGCACCCTCACGCCCTC 62.459 72.222 0.00 0.00 38.03 4.30
404 414 5.501156 GCCCTCGGAAAATCATAGGAATAT 58.499 41.667 0.00 0.00 0.00 1.28
435 459 6.709397 TCATAGGAAATGAGATGACATGCTTC 59.291 38.462 0.00 0.00 0.00 3.86
445 469 6.381133 TGAGATGACATGCTTCTAAGTTCCTA 59.619 38.462 0.00 0.00 31.71 2.94
533 557 7.889873 TGTTTCCTTTACAATTTGAAGGAGA 57.110 32.000 15.37 10.89 46.85 3.71
534 558 7.940850 TGTTTCCTTTACAATTTGAAGGAGAG 58.059 34.615 15.37 1.91 46.85 3.20
535 559 7.777910 TGTTTCCTTTACAATTTGAAGGAGAGA 59.222 33.333 15.37 9.85 46.85 3.10
617 644 4.717280 CCTATCCTACAACCAAAGAGACCT 59.283 45.833 0.00 0.00 0.00 3.85
618 645 5.189934 CCTATCCTACAACCAAAGAGACCTT 59.810 44.000 0.00 0.00 0.00 3.50
619 646 4.618920 TCCTACAACCAAAGAGACCTTC 57.381 45.455 0.00 0.00 0.00 3.46
620 647 3.326880 TCCTACAACCAAAGAGACCTTCC 59.673 47.826 0.00 0.00 0.00 3.46
621 648 3.328050 CCTACAACCAAAGAGACCTTCCT 59.672 47.826 0.00 0.00 0.00 3.36
622 649 4.530946 CCTACAACCAAAGAGACCTTCCTA 59.469 45.833 0.00 0.00 0.00 2.94
623 650 5.189934 CCTACAACCAAAGAGACCTTCCTAT 59.810 44.000 0.00 0.00 0.00 2.57
624 651 4.911390 ACAACCAAAGAGACCTTCCTATG 58.089 43.478 0.00 0.00 0.00 2.23
625 652 4.351111 ACAACCAAAGAGACCTTCCTATGT 59.649 41.667 0.00 0.00 0.00 2.29
626 653 5.163088 ACAACCAAAGAGACCTTCCTATGTT 60.163 40.000 0.00 0.00 0.00 2.71
627 654 5.584551 ACCAAAGAGACCTTCCTATGTTT 57.415 39.130 0.00 0.00 0.00 2.83
628 655 6.697641 ACCAAAGAGACCTTCCTATGTTTA 57.302 37.500 0.00 0.00 0.00 2.01
629 656 6.712276 ACCAAAGAGACCTTCCTATGTTTAG 58.288 40.000 0.00 0.00 0.00 1.85
630 657 6.500751 ACCAAAGAGACCTTCCTATGTTTAGA 59.499 38.462 0.00 0.00 0.00 2.10
702 731 4.759516 TTTCTTATCCTGCGTTCCAAAC 57.240 40.909 0.00 0.00 0.00 2.93
710 739 1.944024 CTGCGTTCCAAACAGGTTACA 59.056 47.619 0.00 0.00 39.02 2.41
724 753 6.675413 ACAGGTTACAGGTCACTAAACATA 57.325 37.500 0.00 0.00 0.00 2.29
766 800 1.315981 TGTTTGCTGCCGTGTCCAAA 61.316 50.000 0.00 0.00 0.00 3.28
818 856 8.597227 CGTGGATTAACTAAACAAATGACGATA 58.403 33.333 0.00 0.00 0.00 2.92
952 1038 3.183574 CGCGTTCATCAAACACTACTGAA 59.816 43.478 0.00 0.00 37.77 3.02
991 1086 0.521291 AATACACACACACGCCATGC 59.479 50.000 0.00 0.00 0.00 4.06
1011 1106 2.906897 CCGTGCAGCCAACCAAGT 60.907 61.111 0.00 0.00 0.00 3.16
1013 1108 1.574428 CGTGCAGCCAACCAAGTAC 59.426 57.895 0.00 0.00 0.00 2.73
1014 1109 1.574428 GTGCAGCCAACCAAGTACG 59.426 57.895 0.00 0.00 0.00 3.67
1015 1110 1.147376 TGCAGCCAACCAAGTACGT 59.853 52.632 0.00 0.00 0.00 3.57
1020 1122 1.695788 AGCCAACCAAGTACGTTACCT 59.304 47.619 0.00 0.00 0.00 3.08
1042 1144 1.055338 GCACATTCTGCAACGAAAGC 58.945 50.000 0.00 0.00 46.29 3.51
1043 1145 1.335324 GCACATTCTGCAACGAAAGCT 60.335 47.619 0.00 0.00 46.29 3.74
1045 1147 3.609175 GCACATTCTGCAACGAAAGCTAA 60.609 43.478 0.00 0.00 46.29 3.09
1046 1148 4.153986 CACATTCTGCAACGAAAGCTAAG 58.846 43.478 0.00 0.00 0.00 2.18
1047 1149 2.969443 TTCTGCAACGAAAGCTAAGC 57.031 45.000 0.00 0.00 0.00 3.09
1052 1159 2.289444 TGCAACGAAAGCTAAGCCTAGT 60.289 45.455 0.00 0.00 0.00 2.57
1260 1383 0.616679 ACTACACCCGGCACTGGTAT 60.617 55.000 0.00 0.00 46.62 2.73
1281 1404 2.202388 GAACGCGACATCGACCGA 60.202 61.111 15.93 0.00 43.02 4.69
1388 1512 0.458543 TCTCGTCGATCTTTGCTGCC 60.459 55.000 0.00 0.00 0.00 4.85
1389 1513 0.737367 CTCGTCGATCTTTGCTGCCA 60.737 55.000 0.00 0.00 0.00 4.92
1390 1514 1.014044 TCGTCGATCTTTGCTGCCAC 61.014 55.000 0.00 0.00 0.00 5.01
1391 1515 1.016130 CGTCGATCTTTGCTGCCACT 61.016 55.000 0.00 0.00 0.00 4.00
1392 1516 0.445436 GTCGATCTTTGCTGCCACTG 59.555 55.000 0.00 0.00 0.00 3.66
1393 1517 1.136147 CGATCTTTGCTGCCACTGC 59.864 57.895 0.00 0.00 38.26 4.40
1410 1534 2.030363 ACTGCTAGCTAGATCGTGCATC 60.030 50.000 25.15 3.69 0.00 3.91
1427 1551 1.878088 CATCCAGGCTATGTGCACATC 59.122 52.381 34.54 21.25 45.15 3.06
1428 1552 0.911053 TCCAGGCTATGTGCACATCA 59.089 50.000 34.54 19.41 45.15 3.07
1429 1553 1.134310 TCCAGGCTATGTGCACATCAG 60.134 52.381 34.54 26.81 45.15 2.90
1430 1554 0.661552 CAGGCTATGTGCACATCAGC 59.338 55.000 34.54 32.74 45.15 4.26
1431 1555 0.253894 AGGCTATGTGCACATCAGCA 59.746 50.000 35.45 23.04 45.15 4.41
1437 1561 4.082657 TGCACATCAGCACATGCA 57.917 50.000 6.64 0.00 45.45 3.96
1438 1562 2.573920 TGCACATCAGCACATGCAT 58.426 47.368 6.64 0.00 42.92 3.96
1439 1563 0.172352 TGCACATCAGCACATGCATG 59.828 50.000 25.09 25.09 42.92 4.06
1896 2020 9.840427 ACTTTGTTTTGATTGGATATCTTTACG 57.160 29.630 2.05 0.00 0.00 3.18
1897 2021 9.289303 CTTTGTTTTGATTGGATATCTTTACGG 57.711 33.333 2.05 0.00 0.00 4.02
1898 2022 8.568676 TTGTTTTGATTGGATATCTTTACGGA 57.431 30.769 2.05 0.00 0.00 4.69
1899 2023 8.208718 TGTTTTGATTGGATATCTTTACGGAG 57.791 34.615 2.05 0.00 0.00 4.63
1901 2025 9.321562 GTTTTGATTGGATATCTTTACGGAGTA 57.678 33.333 2.05 0.00 45.11 2.59
1902 2026 8.882415 TTTGATTGGATATCTTTACGGAGTAC 57.118 34.615 2.05 0.00 45.76 2.73
1903 2027 7.834881 TGATTGGATATCTTTACGGAGTACT 57.165 36.000 0.00 0.00 45.76 2.73
1904 2028 8.246430 TGATTGGATATCTTTACGGAGTACTT 57.754 34.615 2.05 0.00 45.76 2.24
1905 2029 8.701895 TGATTGGATATCTTTACGGAGTACTTT 58.298 33.333 2.05 0.00 45.76 2.66
1906 2030 8.888579 ATTGGATATCTTTACGGAGTACTTTG 57.111 34.615 2.05 0.00 45.76 2.77
1907 2031 7.414222 TGGATATCTTTACGGAGTACTTTGT 57.586 36.000 2.05 1.22 45.76 2.83
1908 2032 7.844009 TGGATATCTTTACGGAGTACTTTGTT 58.156 34.615 2.05 0.00 45.76 2.83
1909 2033 7.762615 TGGATATCTTTACGGAGTACTTTGTTG 59.237 37.037 2.05 0.00 45.76 3.33
1910 2034 7.763071 GGATATCTTTACGGAGTACTTTGTTGT 59.237 37.037 2.05 0.00 45.76 3.32
1911 2035 9.148104 GATATCTTTACGGAGTACTTTGTTGTT 57.852 33.333 0.00 0.00 45.76 2.83
1912 2036 7.797038 ATCTTTACGGAGTACTTTGTTGTTT 57.203 32.000 0.00 0.00 45.76 2.83
1913 2037 7.237920 TCTTTACGGAGTACTTTGTTGTTTC 57.762 36.000 0.00 0.00 45.76 2.78
1914 2038 5.989551 TTACGGAGTACTTTGTTGTTTCC 57.010 39.130 0.00 0.00 45.76 3.13
1915 2039 3.876341 ACGGAGTACTTTGTTGTTTCCA 58.124 40.909 0.00 0.00 41.94 3.53
1916 2040 3.624410 ACGGAGTACTTTGTTGTTTCCAC 59.376 43.478 0.00 0.00 41.94 4.02
1917 2041 3.302870 CGGAGTACTTTGTTGTTTCCACG 60.303 47.826 0.00 0.00 0.00 4.94
1918 2042 3.624410 GGAGTACTTTGTTGTTTCCACGT 59.376 43.478 0.00 0.00 0.00 4.49
1919 2043 4.495184 GGAGTACTTTGTTGTTTCCACGTG 60.495 45.833 9.08 9.08 0.00 4.49
1920 2044 2.931512 ACTTTGTTGTTTCCACGTGG 57.068 45.000 29.26 29.26 0.00 4.94
1921 2045 1.135228 ACTTTGTTGTTTCCACGTGGC 60.135 47.619 30.25 16.49 34.44 5.01
1922 2046 0.173708 TTTGTTGTTTCCACGTGGCC 59.826 50.000 30.25 19.13 34.44 5.36
1923 2047 1.994507 TTGTTGTTTCCACGTGGCCG 61.995 55.000 30.25 6.85 40.83 6.13
1924 2048 2.181521 GTTGTTTCCACGTGGCCGA 61.182 57.895 30.25 16.05 37.88 5.54
1925 2049 1.451567 TTGTTTCCACGTGGCCGAA 60.452 52.632 30.25 19.81 37.88 4.30
1926 2050 0.820074 TTGTTTCCACGTGGCCGAAT 60.820 50.000 30.25 0.00 37.88 3.34
1927 2051 1.209127 GTTTCCACGTGGCCGAATG 59.791 57.895 30.25 4.40 37.88 2.67
1928 2052 1.228003 TTTCCACGTGGCCGAATGT 60.228 52.632 30.25 0.00 37.88 2.71
1929 2053 1.511318 TTTCCACGTGGCCGAATGTG 61.511 55.000 30.25 8.20 36.92 3.21
1930 2054 2.668185 TTCCACGTGGCCGAATGTGT 62.668 55.000 30.25 0.00 35.65 3.72
1931 2055 1.374885 CCACGTGGCCGAATGTGTA 60.375 57.895 24.02 0.00 35.65 2.90
1932 2056 0.742990 CCACGTGGCCGAATGTGTAT 60.743 55.000 24.02 0.00 35.65 2.29
1933 2057 0.373370 CACGTGGCCGAATGTGTATG 59.627 55.000 7.95 0.00 37.88 2.39
1934 2058 0.248012 ACGTGGCCGAATGTGTATGA 59.752 50.000 0.00 0.00 37.88 2.15
1935 2059 0.650512 CGTGGCCGAATGTGTATGAC 59.349 55.000 0.00 0.00 35.63 3.06
1936 2060 0.650512 GTGGCCGAATGTGTATGACG 59.349 55.000 0.00 0.00 0.00 4.35
1937 2061 0.248012 TGGCCGAATGTGTATGACGT 59.752 50.000 0.00 0.00 0.00 4.34
1938 2062 0.650512 GGCCGAATGTGTATGACGTG 59.349 55.000 0.00 0.00 0.00 4.49
1939 2063 1.355971 GCCGAATGTGTATGACGTGT 58.644 50.000 0.00 0.00 0.00 4.49
1940 2064 1.060553 GCCGAATGTGTATGACGTGTG 59.939 52.381 0.00 0.00 0.00 3.82
1941 2065 1.060553 CCGAATGTGTATGACGTGTGC 59.939 52.381 0.00 0.00 0.00 4.57
1942 2066 1.724082 CGAATGTGTATGACGTGTGCA 59.276 47.619 0.00 0.00 0.00 4.57
1943 2067 2.348362 CGAATGTGTATGACGTGTGCAT 59.652 45.455 0.00 0.00 0.00 3.96
1944 2068 3.673366 GAATGTGTATGACGTGTGCATG 58.327 45.455 0.00 0.00 0.00 4.06
1945 2069 2.162319 TGTGTATGACGTGTGCATGT 57.838 45.000 0.00 0.00 0.00 3.21
1946 2070 2.488952 TGTGTATGACGTGTGCATGTT 58.511 42.857 0.00 0.00 0.00 2.71
1947 2071 2.222911 TGTGTATGACGTGTGCATGTTG 59.777 45.455 0.00 0.00 0.00 3.33
1948 2072 1.196581 TGTATGACGTGTGCATGTTGC 59.803 47.619 0.00 0.00 45.29 4.17
1949 2073 0.801872 TATGACGTGTGCATGTTGCC 59.198 50.000 0.00 0.00 44.23 4.52
1950 2074 1.171549 ATGACGTGTGCATGTTGCCA 61.172 50.000 0.00 0.00 44.23 4.92
1951 2075 1.171549 TGACGTGTGCATGTTGCCAT 61.172 50.000 0.00 0.00 44.23 4.40
1959 2083 3.930400 CATGTTGCCATGTCCGATG 57.070 52.632 0.00 0.00 42.92 3.84
1960 2084 1.381522 CATGTTGCCATGTCCGATGA 58.618 50.000 0.00 0.00 42.92 2.92
1961 2085 1.951602 CATGTTGCCATGTCCGATGAT 59.048 47.619 0.00 0.00 42.92 2.45
1962 2086 2.998316 TGTTGCCATGTCCGATGATA 57.002 45.000 0.00 0.00 0.00 2.15
1963 2087 2.837498 TGTTGCCATGTCCGATGATAG 58.163 47.619 0.00 0.00 0.00 2.08
1964 2088 2.146342 GTTGCCATGTCCGATGATAGG 58.854 52.381 0.00 0.00 0.00 2.57
1965 2089 1.423584 TGCCATGTCCGATGATAGGT 58.576 50.000 0.00 0.00 0.00 3.08
1966 2090 2.604139 TGCCATGTCCGATGATAGGTA 58.396 47.619 0.00 0.00 0.00 3.08
1967 2091 2.299013 TGCCATGTCCGATGATAGGTAC 59.701 50.000 0.00 0.00 0.00 3.34
1968 2092 2.563179 GCCATGTCCGATGATAGGTACT 59.437 50.000 0.00 0.00 46.37 2.73
1969 2093 3.367498 GCCATGTCCGATGATAGGTACTC 60.367 52.174 0.00 0.00 41.75 2.59
1970 2094 3.193691 CCATGTCCGATGATAGGTACTCC 59.806 52.174 0.00 0.00 41.75 3.85
1971 2095 2.872732 TGTCCGATGATAGGTACTCCC 58.127 52.381 0.00 0.00 41.75 4.30
1973 2097 3.083293 GTCCGATGATAGGTACTCCCTC 58.917 54.545 0.00 0.00 44.81 4.30
1974 2098 2.041350 TCCGATGATAGGTACTCCCTCC 59.959 54.545 0.00 0.00 44.81 4.30
1975 2099 2.085320 CGATGATAGGTACTCCCTCCG 58.915 57.143 0.00 0.00 44.81 4.63
1976 2100 2.552591 CGATGATAGGTACTCCCTCCGT 60.553 54.545 0.00 0.00 44.81 4.69
1977 2101 3.498334 GATGATAGGTACTCCCTCCGTT 58.502 50.000 0.00 0.00 44.81 4.44
1978 2102 3.393426 TGATAGGTACTCCCTCCGTTT 57.607 47.619 0.00 0.00 44.81 3.60
1979 2103 3.294214 TGATAGGTACTCCCTCCGTTTC 58.706 50.000 0.00 0.00 44.81 2.78
1980 2104 2.905415 TAGGTACTCCCTCCGTTTCA 57.095 50.000 0.00 0.00 44.81 2.69
1981 2105 2.019807 AGGTACTCCCTCCGTTTCAA 57.980 50.000 0.00 0.00 40.71 2.69
1982 2106 2.332117 AGGTACTCCCTCCGTTTCAAA 58.668 47.619 0.00 0.00 40.71 2.69
1983 2107 2.707257 AGGTACTCCCTCCGTTTCAAAA 59.293 45.455 0.00 0.00 40.71 2.44
1984 2108 2.810274 GGTACTCCCTCCGTTTCAAAAC 59.190 50.000 0.00 0.00 35.59 2.43
1985 2109 2.721425 ACTCCCTCCGTTTCAAAACA 57.279 45.000 6.45 0.00 38.81 2.83
1986 2110 2.572290 ACTCCCTCCGTTTCAAAACAG 58.428 47.619 6.45 0.00 38.81 3.16
1987 2111 2.171870 ACTCCCTCCGTTTCAAAACAGA 59.828 45.455 6.45 0.00 38.81 3.41
1988 2112 3.181443 ACTCCCTCCGTTTCAAAACAGAT 60.181 43.478 6.45 0.00 38.81 2.90
1989 2113 3.146066 TCCCTCCGTTTCAAAACAGATG 58.854 45.455 6.45 0.00 38.81 2.90
1990 2114 3.146066 CCCTCCGTTTCAAAACAGATGA 58.854 45.455 6.45 0.00 38.81 2.92
1991 2115 3.058224 CCCTCCGTTTCAAAACAGATGAC 60.058 47.826 6.45 0.00 38.81 3.06
1992 2116 3.058224 CCTCCGTTTCAAAACAGATGACC 60.058 47.826 6.45 0.00 38.81 4.02
1993 2117 2.882137 TCCGTTTCAAAACAGATGACCC 59.118 45.455 6.45 0.00 38.81 4.46
1994 2118 2.621055 CCGTTTCAAAACAGATGACCCA 59.379 45.455 6.45 0.00 38.81 4.51
1995 2119 3.067461 CCGTTTCAAAACAGATGACCCAA 59.933 43.478 6.45 0.00 38.81 4.12
1996 2120 4.261994 CCGTTTCAAAACAGATGACCCAAT 60.262 41.667 6.45 0.00 38.81 3.16
1997 2121 5.288804 CGTTTCAAAACAGATGACCCAATT 58.711 37.500 6.45 0.00 38.81 2.32
1998 2122 5.752955 CGTTTCAAAACAGATGACCCAATTT 59.247 36.000 6.45 0.00 38.81 1.82
1999 2123 6.257630 CGTTTCAAAACAGATGACCCAATTTT 59.742 34.615 6.45 0.00 38.81 1.82
2000 2124 7.408910 GTTTCAAAACAGATGACCCAATTTTG 58.591 34.615 0.81 0.00 38.74 2.44
2001 2125 6.232581 TCAAAACAGATGACCCAATTTTGT 57.767 33.333 0.00 0.00 37.93 2.83
2002 2126 6.047870 TCAAAACAGATGACCCAATTTTGTG 58.952 36.000 0.00 0.00 37.93 3.33
2003 2127 3.665745 ACAGATGACCCAATTTTGTGC 57.334 42.857 0.00 0.00 0.00 4.57
2004 2128 3.233507 ACAGATGACCCAATTTTGTGCT 58.766 40.909 0.00 0.00 0.00 4.40
2005 2129 4.406456 ACAGATGACCCAATTTTGTGCTA 58.594 39.130 0.00 0.00 0.00 3.49
2006 2130 4.832266 ACAGATGACCCAATTTTGTGCTAA 59.168 37.500 0.00 0.00 0.00 3.09
2007 2131 5.163513 CAGATGACCCAATTTTGTGCTAAC 58.836 41.667 0.00 0.00 0.00 2.34
2008 2132 5.047802 CAGATGACCCAATTTTGTGCTAACT 60.048 40.000 0.00 0.00 0.00 2.24
2009 2133 5.539955 AGATGACCCAATTTTGTGCTAACTT 59.460 36.000 0.00 0.00 0.00 2.66
2010 2134 5.606348 TGACCCAATTTTGTGCTAACTTT 57.394 34.783 0.00 0.00 0.00 2.66
2011 2135 5.355596 TGACCCAATTTTGTGCTAACTTTG 58.644 37.500 0.00 0.00 0.00 2.77
2012 2136 5.105146 TGACCCAATTTTGTGCTAACTTTGT 60.105 36.000 0.00 0.00 0.00 2.83
2013 2137 6.096987 TGACCCAATTTTGTGCTAACTTTGTA 59.903 34.615 0.00 0.00 0.00 2.41
2014 2138 6.879400 ACCCAATTTTGTGCTAACTTTGTAA 58.121 32.000 0.00 0.00 0.00 2.41
2015 2139 7.505258 ACCCAATTTTGTGCTAACTTTGTAAT 58.495 30.769 0.00 0.00 0.00 1.89
2016 2140 8.643324 ACCCAATTTTGTGCTAACTTTGTAATA 58.357 29.630 0.00 0.00 0.00 0.98
2017 2141 9.482627 CCCAATTTTGTGCTAACTTTGTAATAA 57.517 29.630 0.00 0.00 0.00 1.40
2031 2155 8.374327 ACTTTGTAATAAAGTTAGCACGAAGT 57.626 30.769 11.31 11.31 38.23 3.01
2032 2156 8.833493 ACTTTGTAATAAAGTTAGCACGAAGTT 58.167 29.630 11.31 0.00 37.34 2.66
2033 2157 8.996988 TTTGTAATAAAGTTAGCACGAAGTTG 57.003 30.769 0.00 0.00 41.61 3.16
2034 2158 7.949903 TGTAATAAAGTTAGCACGAAGTTGA 57.050 32.000 0.00 0.00 41.61 3.18
2035 2159 8.014322 TGTAATAAAGTTAGCACGAAGTTGAG 57.986 34.615 0.00 0.00 41.61 3.02
2036 2160 7.654520 TGTAATAAAGTTAGCACGAAGTTGAGT 59.345 33.333 0.00 0.00 41.61 3.41
2037 2161 6.707599 ATAAAGTTAGCACGAAGTTGAGTC 57.292 37.500 0.00 0.00 41.61 3.36
2038 2162 3.728076 AGTTAGCACGAAGTTGAGTCA 57.272 42.857 0.00 0.00 41.61 3.41
2039 2163 4.258702 AGTTAGCACGAAGTTGAGTCAT 57.741 40.909 0.00 0.00 41.61 3.06
2040 2164 4.238514 AGTTAGCACGAAGTTGAGTCATC 58.761 43.478 0.00 0.00 41.61 2.92
2041 2165 4.021894 AGTTAGCACGAAGTTGAGTCATCT 60.022 41.667 0.00 0.00 41.61 2.90
2042 2166 5.183331 AGTTAGCACGAAGTTGAGTCATCTA 59.817 40.000 4.14 0.00 41.61 1.98
2043 2167 4.727507 AGCACGAAGTTGAGTCATCTAT 57.272 40.909 4.14 0.00 41.61 1.98
2044 2168 5.078411 AGCACGAAGTTGAGTCATCTATT 57.922 39.130 4.14 0.00 41.61 1.73
2045 2169 5.482908 AGCACGAAGTTGAGTCATCTATTT 58.517 37.500 4.14 0.00 41.61 1.40
2046 2170 5.934625 AGCACGAAGTTGAGTCATCTATTTT 59.065 36.000 4.14 0.00 41.61 1.82
2047 2171 6.017933 GCACGAAGTTGAGTCATCTATTTTG 58.982 40.000 4.14 2.09 41.61 2.44
2048 2172 6.537566 CACGAAGTTGAGTCATCTATTTTGG 58.462 40.000 4.14 0.00 41.61 3.28
2049 2173 6.368791 CACGAAGTTGAGTCATCTATTTTGGA 59.631 38.462 4.14 0.00 41.61 3.53
2050 2174 6.934645 ACGAAGTTGAGTCATCTATTTTGGAA 59.065 34.615 4.14 0.00 37.78 3.53
2051 2175 7.095187 ACGAAGTTGAGTCATCTATTTTGGAAC 60.095 37.037 4.14 0.00 37.78 3.62
2052 2176 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
2053 2177 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2054 2178 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2055 2179 5.989477 TGAGTCATCTATTTTGGAACGGAT 58.011 37.500 0.00 0.00 0.00 4.18
2056 2180 5.817296 TGAGTCATCTATTTTGGAACGGATG 59.183 40.000 0.00 0.00 32.78 3.51
2057 2181 5.989477 AGTCATCTATTTTGGAACGGATGA 58.011 37.500 0.00 0.00 35.58 2.92
2058 2182 6.414732 AGTCATCTATTTTGGAACGGATGAA 58.585 36.000 0.00 0.00 37.60 2.57
2059 2183 6.540189 AGTCATCTATTTTGGAACGGATGAAG 59.460 38.462 0.00 0.00 37.60 3.02
2060 2184 6.316390 GTCATCTATTTTGGAACGGATGAAGT 59.684 38.462 0.00 0.00 37.60 3.01
2061 2185 7.494625 GTCATCTATTTTGGAACGGATGAAGTA 59.505 37.037 0.00 0.00 37.60 2.24
2062 2186 8.210946 TCATCTATTTTGGAACGGATGAAGTAT 58.789 33.333 0.00 0.00 35.30 2.12
2063 2187 8.840321 CATCTATTTTGGAACGGATGAAGTATT 58.160 33.333 0.00 0.00 33.04 1.89
2064 2188 8.801882 TCTATTTTGGAACGGATGAAGTATTT 57.198 30.769 0.00 0.00 0.00 1.40
2065 2189 8.889717 TCTATTTTGGAACGGATGAAGTATTTC 58.110 33.333 0.00 0.00 0.00 2.17
2066 2190 5.539582 TTTGGAACGGATGAAGTATTTCG 57.460 39.130 0.00 0.00 36.04 3.46
2067 2191 4.196626 TGGAACGGATGAAGTATTTCGT 57.803 40.909 0.00 0.00 36.04 3.85
2068 2192 5.327616 TGGAACGGATGAAGTATTTCGTA 57.672 39.130 0.00 0.00 36.04 3.43
2069 2193 5.722263 TGGAACGGATGAAGTATTTCGTAA 58.278 37.500 0.00 0.00 36.04 3.18
2070 2194 6.164876 TGGAACGGATGAAGTATTTCGTAAA 58.835 36.000 0.00 0.00 36.04 2.01
2071 2195 6.819649 TGGAACGGATGAAGTATTTCGTAAAT 59.180 34.615 0.00 0.00 36.04 1.40
2072 2196 7.334921 TGGAACGGATGAAGTATTTCGTAAATT 59.665 33.333 0.00 0.00 36.04 1.82
2073 2197 8.179615 GGAACGGATGAAGTATTTCGTAAATTT 58.820 33.333 0.00 0.00 36.04 1.82
2075 2199 9.977762 AACGGATGAAGTATTTCGTAAATTTAC 57.022 29.630 16.87 16.87 36.04 2.01
2076 2200 9.153721 ACGGATGAAGTATTTCGTAAATTTACA 57.846 29.630 24.27 11.42 36.04 2.41
2081 2205 9.549509 TGAAGTATTTCGTAAATTTACATGTGC 57.450 29.630 24.27 12.32 36.04 4.57
2082 2206 8.905103 AAGTATTTCGTAAATTTACATGTGCC 57.095 30.769 24.27 10.31 33.28 5.01
2083 2207 8.276252 AGTATTTCGTAAATTTACATGTGCCT 57.724 30.769 24.27 12.03 33.28 4.75
2084 2208 8.181573 AGTATTTCGTAAATTTACATGTGCCTG 58.818 33.333 24.27 8.68 33.28 4.85
2085 2209 6.561737 TTTCGTAAATTTACATGTGCCTGA 57.438 33.333 24.27 10.57 33.28 3.86
2086 2210 6.561737 TTCGTAAATTTACATGTGCCTGAA 57.438 33.333 24.27 14.92 33.28 3.02
2087 2211 6.561737 TCGTAAATTTACATGTGCCTGAAA 57.438 33.333 24.27 0.38 33.28 2.69
2088 2212 7.151999 TCGTAAATTTACATGTGCCTGAAAT 57.848 32.000 24.27 3.07 33.28 2.17
2089 2213 8.270080 TCGTAAATTTACATGTGCCTGAAATA 57.730 30.769 24.27 0.00 33.28 1.40
2090 2214 8.898761 TCGTAAATTTACATGTGCCTGAAATAT 58.101 29.630 24.27 0.00 33.28 1.28
2091 2215 9.515020 CGTAAATTTACATGTGCCTGAAATATT 57.485 29.630 24.27 6.25 33.28 1.28
2155 2279 8.765488 AGGTAAGTCTAACTAAGTATTCCCTC 57.235 38.462 0.00 0.00 0.00 4.30
2156 2280 8.567851 AGGTAAGTCTAACTAAGTATTCCCTCT 58.432 37.037 0.00 0.00 0.00 3.69
2157 2281 9.199645 GGTAAGTCTAACTAAGTATTCCCTCTT 57.800 37.037 0.00 0.00 0.00 2.85
2159 2283 7.901283 AGTCTAACTAAGTATTCCCTCTTCC 57.099 40.000 0.00 0.00 0.00 3.46
2271 2395 4.780554 TGATCCTAACCATACCACAGTTCA 59.219 41.667 0.00 0.00 0.00 3.18
2436 2560 7.172190 CCGAGAGTTGTTATTAATCATGCTGAT 59.828 37.037 0.00 0.00 39.09 2.90
2470 2594 0.392193 CAGTCTCCACCAGCACATCC 60.392 60.000 0.00 0.00 0.00 3.51
2486 2610 0.326264 ATCCTGTTGGCTCCACTGTC 59.674 55.000 0.00 0.00 0.00 3.51
2524 2648 2.560542 CTCTAGACAGGCACACAACTCT 59.439 50.000 0.00 0.00 0.00 3.24
2588 2712 1.202758 AGAACACGATTTGTCCCTGCA 60.203 47.619 0.00 0.00 37.51 4.41
2789 2913 1.883678 TCCCTTGATGATCTGCTCCA 58.116 50.000 0.00 0.00 0.00 3.86
2794 2918 4.225492 CCCTTGATGATCTGCTCCATAGAT 59.775 45.833 0.00 0.00 37.59 1.98
2820 2944 6.994496 TGTTCCAGAATATTCATGAGGCTAAG 59.006 38.462 17.56 0.33 0.00 2.18
2946 3070 1.222936 GAGCACACTCATCAGGGGG 59.777 63.158 0.00 0.00 42.93 5.40
3053 3177 2.665519 GCATTCCAAAGTGCACGTACAG 60.666 50.000 12.01 2.09 40.94 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.290960 GCTATGTTTCCTCTGGGGTGTT 60.291 50.000 0.00 0.00 36.25 3.32
1 2 1.282157 GCTATGTTTCCTCTGGGGTGT 59.718 52.381 0.00 0.00 36.25 4.16
2 3 1.408822 GGCTATGTTTCCTCTGGGGTG 60.409 57.143 0.00 0.00 36.25 4.61
3 4 0.919710 GGCTATGTTTCCTCTGGGGT 59.080 55.000 0.00 0.00 36.25 4.95
4 5 1.141858 GAGGCTATGTTTCCTCTGGGG 59.858 57.143 1.30 0.00 44.19 4.96
5 6 1.839994 TGAGGCTATGTTTCCTCTGGG 59.160 52.381 9.38 0.00 46.90 4.45
6 7 3.191078 CTGAGGCTATGTTTCCTCTGG 57.809 52.381 9.38 0.21 46.90 3.86
7 8 2.158842 CCCTGAGGCTATGTTTCCTCTG 60.159 54.545 9.38 8.56 46.90 3.35
8 9 2.122768 CCCTGAGGCTATGTTTCCTCT 58.877 52.381 9.38 0.00 46.90 3.69
9 10 2.629336 CCCTGAGGCTATGTTTCCTC 57.371 55.000 0.00 1.54 46.95 3.71
21 22 1.440938 CTACGTCTCGAGCCCTGAGG 61.441 65.000 7.81 0.00 34.19 3.86
22 23 1.440938 CCTACGTCTCGAGCCCTGAG 61.441 65.000 7.81 1.03 34.72 3.35
23 24 1.451567 CCTACGTCTCGAGCCCTGA 60.452 63.158 7.81 0.00 0.00 3.86
24 25 2.482333 CCCTACGTCTCGAGCCCTG 61.482 68.421 7.81 0.00 0.00 4.45
25 26 2.124236 CCCTACGTCTCGAGCCCT 60.124 66.667 7.81 0.00 0.00 5.19
26 27 2.439883 ACCCTACGTCTCGAGCCC 60.440 66.667 7.81 0.00 0.00 5.19
27 28 3.109240 GACCCTACGTCTCGAGCC 58.891 66.667 7.81 0.00 38.57 4.70
41 42 1.112950 CTCTCGGAGGGGTAAAGACC 58.887 60.000 4.96 0.00 46.13 3.85
42 43 1.112950 CCTCTCGGAGGGGTAAAGAC 58.887 60.000 16.16 0.00 45.43 3.01
43 44 3.609798 CCTCTCGGAGGGGTAAAGA 57.390 57.895 16.16 0.00 45.43 2.52
52 53 0.323908 AGTTCAGGTCCCTCTCGGAG 60.324 60.000 0.00 0.00 43.19 4.63
53 54 0.323542 GAGTTCAGGTCCCTCTCGGA 60.324 60.000 0.00 0.00 38.83 4.55
54 55 1.658686 CGAGTTCAGGTCCCTCTCGG 61.659 65.000 12.65 0.00 42.45 4.63
55 56 1.803943 CGAGTTCAGGTCCCTCTCG 59.196 63.158 8.09 8.09 41.02 4.04
56 57 2.125773 TACGAGTTCAGGTCCCTCTC 57.874 55.000 0.00 0.00 0.00 3.20
57 58 2.599408 TTACGAGTTCAGGTCCCTCT 57.401 50.000 0.00 0.00 0.00 3.69
58 59 3.672767 TTTTACGAGTTCAGGTCCCTC 57.327 47.619 0.00 0.00 0.00 4.30
59 60 3.055312 GGATTTTACGAGTTCAGGTCCCT 60.055 47.826 0.00 0.00 0.00 4.20
60 61 3.268330 GGATTTTACGAGTTCAGGTCCC 58.732 50.000 0.00 0.00 0.00 4.46
61 62 2.928116 CGGATTTTACGAGTTCAGGTCC 59.072 50.000 0.00 0.00 0.00 4.46
62 63 3.841643 TCGGATTTTACGAGTTCAGGTC 58.158 45.455 0.00 0.00 35.12 3.85
63 64 3.947910 TCGGATTTTACGAGTTCAGGT 57.052 42.857 0.00 0.00 35.12 4.00
71 72 3.311106 GTGTGACACTCGGATTTTACGA 58.689 45.455 8.76 0.00 38.79 3.43
72 73 2.410730 GGTGTGACACTCGGATTTTACG 59.589 50.000 16.07 0.00 34.40 3.18
73 74 3.660865 AGGTGTGACACTCGGATTTTAC 58.339 45.455 16.07 0.00 34.40 2.01
74 75 4.312443 GAAGGTGTGACACTCGGATTTTA 58.688 43.478 16.07 0.00 34.40 1.52
75 76 2.930826 AGGTGTGACACTCGGATTTT 57.069 45.000 16.07 0.00 34.40 1.82
76 77 2.767505 GAAGGTGTGACACTCGGATTT 58.232 47.619 16.07 1.41 34.40 2.17
77 78 1.336887 CGAAGGTGTGACACTCGGATT 60.337 52.381 16.07 3.37 31.51 3.01
78 79 0.243907 CGAAGGTGTGACACTCGGAT 59.756 55.000 16.07 0.00 31.51 4.18
79 80 1.658114 CGAAGGTGTGACACTCGGA 59.342 57.895 16.07 0.00 31.51 4.55
80 81 2.022129 GCGAAGGTGTGACACTCGG 61.022 63.158 22.86 9.83 34.28 4.63
81 82 2.022129 GGCGAAGGTGTGACACTCG 61.022 63.158 19.09 19.09 35.92 4.18
82 83 2.022129 CGGCGAAGGTGTGACACTC 61.022 63.158 16.07 5.30 34.40 3.51
83 84 1.457823 TACGGCGAAGGTGTGACACT 61.458 55.000 16.62 0.00 34.40 3.55
84 85 1.007038 TACGGCGAAGGTGTGACAC 60.007 57.895 16.62 7.29 0.00 3.67
85 86 1.287815 CTACGGCGAAGGTGTGACA 59.712 57.895 16.62 0.00 0.00 3.58
86 87 2.092882 GCTACGGCGAAGGTGTGAC 61.093 63.158 16.62 0.00 0.00 3.67
87 88 0.961857 TAGCTACGGCGAAGGTGTGA 60.962 55.000 16.62 0.00 44.37 3.58
88 89 0.525668 CTAGCTACGGCGAAGGTGTG 60.526 60.000 16.62 0.00 44.37 3.82
89 90 1.664321 CCTAGCTACGGCGAAGGTGT 61.664 60.000 16.62 0.00 44.37 4.16
90 91 1.065928 CCTAGCTACGGCGAAGGTG 59.934 63.158 16.62 0.00 44.37 4.00
91 92 1.379576 ACCTAGCTACGGCGAAGGT 60.380 57.895 16.62 14.66 46.94 3.50
92 93 0.248949 GAACCTAGCTACGGCGAAGG 60.249 60.000 16.62 14.00 45.59 3.46
93 94 0.248949 GGAACCTAGCTACGGCGAAG 60.249 60.000 16.62 2.38 44.37 3.79
94 95 0.966875 TGGAACCTAGCTACGGCGAA 60.967 55.000 16.62 0.00 44.37 4.70
95 96 1.378911 TGGAACCTAGCTACGGCGA 60.379 57.895 16.62 0.00 44.37 5.54
96 97 1.226888 GTGGAACCTAGCTACGGCG 60.227 63.158 4.80 4.80 44.37 6.46
97 98 4.829588 GTGGAACCTAGCTACGGC 57.170 61.111 8.61 0.00 39.06 5.68
108 109 2.420547 GGGTACGAAATAGGGGTGGAAC 60.421 54.545 0.00 0.00 0.00 3.62
109 110 1.839354 GGGTACGAAATAGGGGTGGAA 59.161 52.381 0.00 0.00 0.00 3.53
110 111 1.499368 GGGTACGAAATAGGGGTGGA 58.501 55.000 0.00 0.00 0.00 4.02
111 112 0.471191 GGGGTACGAAATAGGGGTGG 59.529 60.000 0.00 0.00 0.00 4.61
112 113 1.503800 AGGGGTACGAAATAGGGGTG 58.496 55.000 0.00 0.00 0.00 4.61
113 114 2.248423 ACTAGGGGTACGAAATAGGGGT 59.752 50.000 0.00 0.00 0.00 4.95
114 115 2.968271 ACTAGGGGTACGAAATAGGGG 58.032 52.381 0.00 0.00 0.00 4.79
125 126 6.587560 ATCTGACAGTAAGTACTAGGGGTA 57.412 41.667 1.59 0.00 34.13 3.69
126 127 4.942363 TCTGACAGTAAGTACTAGGGGT 57.058 45.455 1.59 0.00 34.13 4.95
127 128 5.892119 TGAATCTGACAGTAAGTACTAGGGG 59.108 44.000 1.59 0.00 34.13 4.79
128 129 7.589958 ATGAATCTGACAGTAAGTACTAGGG 57.410 40.000 1.59 0.00 34.13 3.53
129 130 7.436673 GCAATGAATCTGACAGTAAGTACTAGG 59.563 40.741 1.59 0.00 34.13 3.02
130 131 7.436673 GGCAATGAATCTGACAGTAAGTACTAG 59.563 40.741 1.59 0.00 34.13 2.57
131 132 7.124298 AGGCAATGAATCTGACAGTAAGTACTA 59.876 37.037 1.59 0.00 34.13 1.82
132 133 6.070538 AGGCAATGAATCTGACAGTAAGTACT 60.071 38.462 1.59 0.00 36.90 2.73
133 134 6.109359 AGGCAATGAATCTGACAGTAAGTAC 58.891 40.000 1.59 0.00 0.00 2.73
134 135 6.299805 AGGCAATGAATCTGACAGTAAGTA 57.700 37.500 1.59 0.00 0.00 2.24
135 136 5.171339 AGGCAATGAATCTGACAGTAAGT 57.829 39.130 1.59 0.00 0.00 2.24
136 137 4.269603 CGAGGCAATGAATCTGACAGTAAG 59.730 45.833 1.59 0.00 0.00 2.34
137 138 4.081697 TCGAGGCAATGAATCTGACAGTAA 60.082 41.667 1.59 0.00 0.00 2.24
138 139 3.447229 TCGAGGCAATGAATCTGACAGTA 59.553 43.478 1.59 0.00 0.00 2.74
139 140 2.234661 TCGAGGCAATGAATCTGACAGT 59.765 45.455 1.59 0.00 0.00 3.55
140 141 2.606725 GTCGAGGCAATGAATCTGACAG 59.393 50.000 0.00 0.00 0.00 3.51
141 142 2.028203 TGTCGAGGCAATGAATCTGACA 60.028 45.455 0.00 0.00 33.14 3.58
142 143 2.606725 CTGTCGAGGCAATGAATCTGAC 59.393 50.000 0.00 0.00 0.00 3.51
143 144 2.897436 CTGTCGAGGCAATGAATCTGA 58.103 47.619 0.00 0.00 0.00 3.27
144 145 1.329906 GCTGTCGAGGCAATGAATCTG 59.670 52.381 5.56 0.00 0.00 2.90
145 146 1.661341 GCTGTCGAGGCAATGAATCT 58.339 50.000 5.56 0.00 0.00 2.40
146 147 0.659957 GGCTGTCGAGGCAATGAATC 59.340 55.000 11.59 0.00 44.34 2.52
147 148 1.091771 CGGCTGTCGAGGCAATGAAT 61.092 55.000 11.59 0.00 45.23 2.57
148 149 1.741401 CGGCTGTCGAGGCAATGAA 60.741 57.895 11.59 0.00 45.23 2.57
149 150 2.125552 CGGCTGTCGAGGCAATGA 60.126 61.111 11.59 0.00 45.23 2.57
150 151 2.434884 ACGGCTGTCGAGGCAATG 60.435 61.111 9.35 4.43 45.23 2.82
151 152 2.125512 GACGGCTGTCGAGGCAAT 60.126 61.111 10.53 0.12 45.23 3.56
159 160 3.112709 GCTCCAACGACGGCTGTC 61.113 66.667 16.12 16.12 41.91 3.51
160 161 4.681978 GGCTCCAACGACGGCTGT 62.682 66.667 0.00 0.00 0.00 4.40
161 162 4.680237 TGGCTCCAACGACGGCTG 62.680 66.667 0.00 0.00 0.00 4.85
162 163 4.681978 GTGGCTCCAACGACGGCT 62.682 66.667 0.00 0.00 0.00 5.52
164 165 3.934391 GAGGTGGCTCCAACGACGG 62.934 68.421 8.51 0.00 38.94 4.79
165 166 2.432628 GAGGTGGCTCCAACGACG 60.433 66.667 8.51 0.00 38.94 5.12
166 167 0.951040 CTTGAGGTGGCTCCAACGAC 60.951 60.000 8.51 0.00 38.94 4.34
167 168 1.371183 CTTGAGGTGGCTCCAACGA 59.629 57.895 8.51 1.04 38.94 3.85
183 184 2.270874 GACATGGTGGGCGGATCCTT 62.271 60.000 10.75 0.00 34.39 3.36
197 198 1.750778 GGTGGCAACCCATAAGACATG 59.249 52.381 0.00 0.00 44.51 3.21
199 200 3.662290 GGTGGCAACCCATAAGACA 57.338 52.632 0.00 0.00 44.51 3.41
226 235 1.686800 GCATGGGGGCAAAGGTGAT 60.687 57.895 0.00 0.00 0.00 3.06
243 253 2.703409 GCATGGTCACGTCGATGC 59.297 61.111 4.06 8.15 40.85 3.91
244 254 2.173669 GGGCATGGTCACGTCGATG 61.174 63.158 2.26 2.26 0.00 3.84
245 255 2.186903 GGGCATGGTCACGTCGAT 59.813 61.111 0.00 0.00 0.00 3.59
246 256 4.077184 GGGGCATGGTCACGTCGA 62.077 66.667 0.00 0.00 0.00 4.20
280 290 1.257750 TGCGGGTGTGTGCTAGATCT 61.258 55.000 0.00 0.00 0.00 2.75
285 295 2.030412 CAGTGCGGGTGTGTGCTA 59.970 61.111 0.00 0.00 0.00 3.49
305 315 1.667830 CAAGTCATGGTGGCGACGT 60.668 57.895 0.00 0.00 37.23 4.34
347 357 6.309712 TCCGGCTATATATGCGTACTTATC 57.690 41.667 0.00 0.00 0.00 1.75
350 360 3.181489 GCTCCGGCTATATATGCGTACTT 60.181 47.826 0.00 0.00 35.22 2.24
354 364 1.135083 GTGCTCCGGCTATATATGCGT 60.135 52.381 0.00 0.00 39.59 5.24
361 371 1.113517 GTGAGGGTGCTCCGGCTATA 61.114 60.000 0.00 0.00 41.52 1.31
362 372 2.041922 TGAGGGTGCTCCGGCTAT 60.042 61.111 0.00 0.00 41.52 2.97
409 433 5.996513 AGCATGTCATCTCATTTCCTATGAC 59.003 40.000 7.23 7.23 45.40 3.06
486 510 9.675464 AACAATATTACCTCGAACCTAATGAAA 57.325 29.630 0.00 0.00 0.00 2.69
487 511 9.675464 AAACAATATTACCTCGAACCTAATGAA 57.325 29.630 0.00 0.00 0.00 2.57
510 534 8.166422 TCTCTCCTTCAAATTGTAAAGGAAAC 57.834 34.615 14.53 0.00 45.91 2.78
524 548 5.309543 TGTAGGATTGGTTTCTCTCCTTCAA 59.690 40.000 0.00 0.00 38.95 2.69
529 553 5.071115 AGCTATGTAGGATTGGTTTCTCTCC 59.929 44.000 0.00 0.00 0.00 3.71
530 554 6.168270 AGCTATGTAGGATTGGTTTCTCTC 57.832 41.667 0.00 0.00 0.00 3.20
533 557 6.808321 TGTAGCTATGTAGGATTGGTTTCT 57.192 37.500 0.00 0.00 0.00 2.52
534 558 7.201705 GGTTTGTAGCTATGTAGGATTGGTTTC 60.202 40.741 0.00 0.00 0.00 2.78
535 559 6.602009 GGTTTGTAGCTATGTAGGATTGGTTT 59.398 38.462 0.00 0.00 0.00 3.27
587 614 9.681062 CTCTTTGGTTGTAGGATAGGATTTTAA 57.319 33.333 0.00 0.00 0.00 1.52
595 622 5.941555 AGGTCTCTTTGGTTGTAGGATAG 57.058 43.478 0.00 0.00 0.00 2.08
702 731 6.460781 TGTATGTTTAGTGACCTGTAACCTG 58.539 40.000 0.00 0.00 0.00 4.00
710 739 5.412594 CACTTGCATGTATGTTTAGTGACCT 59.587 40.000 4.73 0.00 36.05 3.85
724 753 2.202395 AAAGCGGCCACTTGCATGT 61.202 52.632 6.82 0.00 43.89 3.21
766 800 2.267174 ACTGACAAGCAAGTGAGCAT 57.733 45.000 0.00 0.00 36.85 3.79
818 856 2.125431 CGACCGGGCCGTGTAATT 60.125 61.111 26.32 0.78 0.00 1.40
933 996 4.515191 TGCCTTCAGTAGTGTTTGATGAAC 59.485 41.667 0.00 0.00 38.78 3.18
936 999 6.017605 GGATATGCCTTCAGTAGTGTTTGATG 60.018 42.308 0.00 0.00 0.00 3.07
991 1086 4.641645 TGGTTGGCTGCACGGAGG 62.642 66.667 0.50 0.00 0.00 4.30
1040 1142 4.282496 TCTTGCTCTAACTAGGCTTAGCT 58.718 43.478 3.59 0.00 0.00 3.32
1041 1143 4.339814 TCTCTTGCTCTAACTAGGCTTAGC 59.660 45.833 2.18 0.00 0.00 3.09
1042 1144 5.009610 CCTCTCTTGCTCTAACTAGGCTTAG 59.990 48.000 0.48 0.48 0.00 2.18
1043 1145 4.890581 CCTCTCTTGCTCTAACTAGGCTTA 59.109 45.833 0.00 0.00 0.00 3.09
1045 1147 3.295973 CCTCTCTTGCTCTAACTAGGCT 58.704 50.000 0.00 0.00 0.00 4.58
1046 1148 3.028130 ACCTCTCTTGCTCTAACTAGGC 58.972 50.000 0.00 0.00 0.00 3.93
1047 1149 5.046950 ACAAACCTCTCTTGCTCTAACTAGG 60.047 44.000 0.00 0.00 0.00 3.02
1052 1159 3.403038 GCACAAACCTCTCTTGCTCTAA 58.597 45.455 0.00 0.00 0.00 2.10
1130 1244 1.687996 CCTCTTCCTCCTCCTGTCTCC 60.688 61.905 0.00 0.00 0.00 3.71
1281 1404 0.108138 CGATGAACTCGGAGGCCTTT 60.108 55.000 6.77 0.00 43.82 3.11
1388 1512 1.066152 TGCACGATCTAGCTAGCAGTG 59.934 52.381 25.30 25.30 0.00 3.66
1389 1513 1.393603 TGCACGATCTAGCTAGCAGT 58.606 50.000 18.83 12.03 0.00 4.40
1390 1514 2.594321 GATGCACGATCTAGCTAGCAG 58.406 52.381 18.83 12.27 35.26 4.24
1391 1515 1.270826 GGATGCACGATCTAGCTAGCA 59.729 52.381 18.83 10.59 36.34 3.49
1392 1516 1.270826 TGGATGCACGATCTAGCTAGC 59.729 52.381 16.35 6.62 0.00 3.42
1393 1517 2.094803 CCTGGATGCACGATCTAGCTAG 60.095 54.545 15.01 15.01 38.15 3.42
1410 1534 1.306148 CTGATGTGCACATAGCCTGG 58.694 55.000 31.45 13.89 44.83 4.45
1437 1561 1.818060 ACACACACACACAAGCAACAT 59.182 42.857 0.00 0.00 0.00 2.71
1438 1562 1.068679 CACACACACACACAAGCAACA 60.069 47.619 0.00 0.00 0.00 3.33
1439 1563 1.068610 ACACACACACACACAAGCAAC 60.069 47.619 0.00 0.00 0.00 4.17
1870 1994 9.840427 CGTAAAGATATCCAATCAAAACAAAGT 57.160 29.630 0.00 0.00 0.00 2.66
1871 1995 9.289303 CCGTAAAGATATCCAATCAAAACAAAG 57.711 33.333 0.00 0.00 0.00 2.77
1872 1996 9.015367 TCCGTAAAGATATCCAATCAAAACAAA 57.985 29.630 0.00 0.00 0.00 2.83
1873 1997 8.568676 TCCGTAAAGATATCCAATCAAAACAA 57.431 30.769 0.00 0.00 0.00 2.83
1874 1998 7.827236 ACTCCGTAAAGATATCCAATCAAAACA 59.173 33.333 0.00 0.00 0.00 2.83
1875 1999 8.209917 ACTCCGTAAAGATATCCAATCAAAAC 57.790 34.615 0.00 0.00 0.00 2.43
1876 2000 9.321562 GTACTCCGTAAAGATATCCAATCAAAA 57.678 33.333 0.00 0.00 0.00 2.44
1877 2001 8.701895 AGTACTCCGTAAAGATATCCAATCAAA 58.298 33.333 0.00 0.00 0.00 2.69
1878 2002 8.246430 AGTACTCCGTAAAGATATCCAATCAA 57.754 34.615 0.00 0.00 0.00 2.57
1879 2003 7.834881 AGTACTCCGTAAAGATATCCAATCA 57.165 36.000 0.00 0.00 0.00 2.57
1880 2004 8.979574 CAAAGTACTCCGTAAAGATATCCAATC 58.020 37.037 0.00 0.00 0.00 2.67
1881 2005 8.483758 ACAAAGTACTCCGTAAAGATATCCAAT 58.516 33.333 0.00 0.00 0.00 3.16
1882 2006 7.844009 ACAAAGTACTCCGTAAAGATATCCAA 58.156 34.615 0.00 0.00 0.00 3.53
1883 2007 7.414222 ACAAAGTACTCCGTAAAGATATCCA 57.586 36.000 0.00 0.00 0.00 3.41
1884 2008 7.763071 ACAACAAAGTACTCCGTAAAGATATCC 59.237 37.037 0.00 0.00 0.00 2.59
1885 2009 8.699283 ACAACAAAGTACTCCGTAAAGATATC 57.301 34.615 0.00 0.00 0.00 1.63
1886 2010 9.498176 AAACAACAAAGTACTCCGTAAAGATAT 57.502 29.630 0.00 0.00 0.00 1.63
1887 2011 8.891671 AAACAACAAAGTACTCCGTAAAGATA 57.108 30.769 0.00 0.00 0.00 1.98
1888 2012 7.041576 GGAAACAACAAAGTACTCCGTAAAGAT 60.042 37.037 0.00 0.00 0.00 2.40
1889 2013 6.258507 GGAAACAACAAAGTACTCCGTAAAGA 59.741 38.462 0.00 0.00 0.00 2.52
1890 2014 6.037391 TGGAAACAACAAAGTACTCCGTAAAG 59.963 38.462 0.00 0.00 37.44 1.85
1891 2015 5.879223 TGGAAACAACAAAGTACTCCGTAAA 59.121 36.000 0.00 0.00 37.44 2.01
1892 2016 5.294060 GTGGAAACAACAAAGTACTCCGTAA 59.706 40.000 0.00 0.00 46.06 3.18
1893 2017 4.810491 GTGGAAACAACAAAGTACTCCGTA 59.190 41.667 0.00 0.00 46.06 4.02
1894 2018 3.624410 GTGGAAACAACAAAGTACTCCGT 59.376 43.478 0.00 0.00 46.06 4.69
1895 2019 3.302870 CGTGGAAACAACAAAGTACTCCG 60.303 47.826 0.00 0.00 46.06 4.63
1896 2020 3.624410 ACGTGGAAACAACAAAGTACTCC 59.376 43.478 0.00 0.00 46.06 3.85
1897 2021 4.495184 CCACGTGGAAACAACAAAGTACTC 60.495 45.833 31.31 0.00 46.06 2.59
1898 2022 3.375922 CCACGTGGAAACAACAAAGTACT 59.624 43.478 31.31 0.00 46.06 2.73
1899 2023 3.687200 CCACGTGGAAACAACAAAGTAC 58.313 45.455 31.31 0.00 46.06 2.73
1900 2024 2.097791 GCCACGTGGAAACAACAAAGTA 59.902 45.455 38.30 0.00 46.06 2.24
1901 2025 1.135228 GCCACGTGGAAACAACAAAGT 60.135 47.619 38.30 0.00 46.06 2.66
1902 2026 1.555477 GCCACGTGGAAACAACAAAG 58.445 50.000 38.30 7.23 46.06 2.77
1903 2027 0.173708 GGCCACGTGGAAACAACAAA 59.826 50.000 38.30 0.00 46.06 2.83
1904 2028 1.810532 GGCCACGTGGAAACAACAA 59.189 52.632 38.30 0.00 46.06 2.83
1905 2029 2.473760 CGGCCACGTGGAAACAACA 61.474 57.895 38.30 0.00 46.06 3.33
1906 2030 1.716826 TTCGGCCACGTGGAAACAAC 61.717 55.000 38.30 18.50 46.06 3.32
1907 2031 0.820074 ATTCGGCCACGTGGAAACAA 60.820 50.000 38.30 22.42 46.06 2.83
1908 2032 1.228003 ATTCGGCCACGTGGAAACA 60.228 52.632 38.30 18.37 41.85 2.83
1909 2033 1.209127 CATTCGGCCACGTGGAAAC 59.791 57.895 38.30 24.01 41.85 2.78
1910 2034 1.228003 ACATTCGGCCACGTGGAAA 60.228 52.632 38.30 25.96 41.85 3.13
1911 2035 1.963855 CACATTCGGCCACGTGGAA 60.964 57.895 38.30 23.30 41.85 3.53
1912 2036 1.817911 TACACATTCGGCCACGTGGA 61.818 55.000 38.30 17.93 41.85 4.02
1913 2037 0.742990 ATACACATTCGGCCACGTGG 60.743 55.000 30.66 30.66 41.85 4.94
1914 2038 0.373370 CATACACATTCGGCCACGTG 59.627 55.000 9.08 9.08 41.85 4.49
1915 2039 0.248012 TCATACACATTCGGCCACGT 59.752 50.000 2.24 0.00 41.85 4.49
1916 2040 0.650512 GTCATACACATTCGGCCACG 59.349 55.000 2.24 0.00 42.74 4.94
1917 2041 0.650512 CGTCATACACATTCGGCCAC 59.349 55.000 2.24 0.00 0.00 5.01
1918 2042 0.248012 ACGTCATACACATTCGGCCA 59.752 50.000 2.24 0.00 0.00 5.36
1919 2043 0.650512 CACGTCATACACATTCGGCC 59.349 55.000 0.00 0.00 0.00 6.13
1920 2044 1.060553 CACACGTCATACACATTCGGC 59.939 52.381 0.00 0.00 0.00 5.54
1921 2045 1.060553 GCACACGTCATACACATTCGG 59.939 52.381 0.00 0.00 0.00 4.30
1922 2046 1.724082 TGCACACGTCATACACATTCG 59.276 47.619 0.00 0.00 0.00 3.34
1923 2047 3.125146 ACATGCACACGTCATACACATTC 59.875 43.478 0.00 0.00 0.00 2.67
1924 2048 3.073678 ACATGCACACGTCATACACATT 58.926 40.909 0.00 0.00 0.00 2.71
1925 2049 2.698803 ACATGCACACGTCATACACAT 58.301 42.857 0.00 0.00 0.00 3.21
1926 2050 2.162319 ACATGCACACGTCATACACA 57.838 45.000 0.00 0.00 0.00 3.72
1927 2051 2.838275 CAACATGCACACGTCATACAC 58.162 47.619 0.00 0.00 0.00 2.90
1928 2052 1.196581 GCAACATGCACACGTCATACA 59.803 47.619 0.00 0.00 44.26 2.29
1929 2053 1.882198 GCAACATGCACACGTCATAC 58.118 50.000 0.00 0.00 44.26 2.39
1944 2068 2.146342 CCTATCATCGGACATGGCAAC 58.854 52.381 0.00 0.00 0.00 4.17
1945 2069 1.768275 ACCTATCATCGGACATGGCAA 59.232 47.619 0.00 0.00 0.00 4.52
1946 2070 1.423584 ACCTATCATCGGACATGGCA 58.576 50.000 0.00 0.00 0.00 4.92
1947 2071 2.563179 AGTACCTATCATCGGACATGGC 59.437 50.000 0.00 0.00 0.00 4.40
1948 2072 3.193691 GGAGTACCTATCATCGGACATGG 59.806 52.174 0.00 0.00 0.00 3.66
1949 2073 3.193691 GGGAGTACCTATCATCGGACATG 59.806 52.174 0.00 0.00 35.85 3.21
1950 2074 3.432378 GGGAGTACCTATCATCGGACAT 58.568 50.000 0.00 0.00 35.85 3.06
1951 2075 2.872732 GGGAGTACCTATCATCGGACA 58.127 52.381 0.00 0.00 35.85 4.02
1959 2083 9.622100 TGTTTTGAAACGGAGGGAGTACCTATC 62.622 44.444 0.00 0.00 45.48 2.08
1960 2084 7.934773 TGTTTTGAAACGGAGGGAGTACCTAT 61.935 42.308 0.00 0.00 45.48 2.57
1961 2085 6.686557 TGTTTTGAAACGGAGGGAGTACCTA 61.687 44.000 0.00 0.00 45.48 3.08
1963 2087 2.810274 GTTTTGAAACGGAGGGAGTACC 59.190 50.000 0.00 0.00 40.67 3.34
1964 2088 3.469739 TGTTTTGAAACGGAGGGAGTAC 58.530 45.455 2.53 0.00 41.74 2.73
1965 2089 3.388676 TCTGTTTTGAAACGGAGGGAGTA 59.611 43.478 12.78 0.00 46.35 2.59
1966 2090 2.171870 TCTGTTTTGAAACGGAGGGAGT 59.828 45.455 12.78 0.00 46.35 3.85
1967 2091 2.846193 TCTGTTTTGAAACGGAGGGAG 58.154 47.619 12.78 0.00 46.35 4.30
1973 2097 2.621055 TGGGTCATCTGTTTTGAAACGG 59.379 45.455 8.75 8.75 44.68 4.44
1974 2098 3.980646 TGGGTCATCTGTTTTGAAACG 57.019 42.857 2.53 0.00 41.74 3.60
1975 2099 7.065683 ACAAAATTGGGTCATCTGTTTTGAAAC 59.934 33.333 13.35 0.00 38.26 2.78
1976 2100 7.065563 CACAAAATTGGGTCATCTGTTTTGAAA 59.934 33.333 13.35 0.00 38.26 2.69
1977 2101 6.538021 CACAAAATTGGGTCATCTGTTTTGAA 59.462 34.615 13.35 0.00 38.26 2.69
1978 2102 6.047870 CACAAAATTGGGTCATCTGTTTTGA 58.952 36.000 13.35 0.00 38.26 2.69
1979 2103 5.277442 GCACAAAATTGGGTCATCTGTTTTG 60.277 40.000 0.00 0.00 40.48 2.44
1980 2104 4.815846 GCACAAAATTGGGTCATCTGTTTT 59.184 37.500 0.00 0.00 33.05 2.43
1981 2105 4.101430 AGCACAAAATTGGGTCATCTGTTT 59.899 37.500 0.00 0.00 33.05 2.83
1982 2106 3.642848 AGCACAAAATTGGGTCATCTGTT 59.357 39.130 0.00 0.00 33.05 3.16
1983 2107 3.233507 AGCACAAAATTGGGTCATCTGT 58.766 40.909 0.00 0.00 33.05 3.41
1984 2108 3.947910 AGCACAAAATTGGGTCATCTG 57.052 42.857 0.00 0.00 33.05 2.90
1985 2109 5.079643 AGTTAGCACAAAATTGGGTCATCT 58.920 37.500 0.00 0.00 33.05 2.90
1986 2110 5.391312 AGTTAGCACAAAATTGGGTCATC 57.609 39.130 0.00 0.00 33.05 2.92
1987 2111 5.806654 AAGTTAGCACAAAATTGGGTCAT 57.193 34.783 0.00 0.00 33.05 3.06
1988 2112 5.105146 ACAAAGTTAGCACAAAATTGGGTCA 60.105 36.000 0.00 0.00 33.05 4.02
1989 2113 5.356426 ACAAAGTTAGCACAAAATTGGGTC 58.644 37.500 0.00 0.00 33.05 4.46
1990 2114 5.351948 ACAAAGTTAGCACAAAATTGGGT 57.648 34.783 0.00 0.00 33.05 4.51
1991 2115 7.961325 ATTACAAAGTTAGCACAAAATTGGG 57.039 32.000 0.00 0.00 33.81 4.12
2006 2130 8.374327 ACTTCGTGCTAACTTTATTACAAAGT 57.626 30.769 0.00 0.00 41.82 2.66
2007 2131 9.103048 CAACTTCGTGCTAACTTTATTACAAAG 57.897 33.333 0.00 0.00 0.00 2.77
2008 2132 8.828644 TCAACTTCGTGCTAACTTTATTACAAA 58.171 29.630 0.00 0.00 0.00 2.83
2009 2133 8.367943 TCAACTTCGTGCTAACTTTATTACAA 57.632 30.769 0.00 0.00 0.00 2.41
2010 2134 7.654520 ACTCAACTTCGTGCTAACTTTATTACA 59.345 33.333 0.00 0.00 0.00 2.41
2011 2135 8.015409 ACTCAACTTCGTGCTAACTTTATTAC 57.985 34.615 0.00 0.00 0.00 1.89
2012 2136 7.868922 TGACTCAACTTCGTGCTAACTTTATTA 59.131 33.333 0.00 0.00 0.00 0.98
2013 2137 6.704493 TGACTCAACTTCGTGCTAACTTTATT 59.296 34.615 0.00 0.00 0.00 1.40
2014 2138 6.220930 TGACTCAACTTCGTGCTAACTTTAT 58.779 36.000 0.00 0.00 0.00 1.40
2015 2139 5.593968 TGACTCAACTTCGTGCTAACTTTA 58.406 37.500 0.00 0.00 0.00 1.85
2016 2140 4.439057 TGACTCAACTTCGTGCTAACTTT 58.561 39.130 0.00 0.00 0.00 2.66
2017 2141 4.054780 TGACTCAACTTCGTGCTAACTT 57.945 40.909 0.00 0.00 0.00 2.66
2018 2142 3.728076 TGACTCAACTTCGTGCTAACT 57.272 42.857 0.00 0.00 0.00 2.24
2019 2143 4.238514 AGATGACTCAACTTCGTGCTAAC 58.761 43.478 0.00 0.00 0.00 2.34
2020 2144 4.521130 AGATGACTCAACTTCGTGCTAA 57.479 40.909 0.00 0.00 0.00 3.09
2021 2145 5.836821 ATAGATGACTCAACTTCGTGCTA 57.163 39.130 0.00 0.00 0.00 3.49
2022 2146 4.727507 ATAGATGACTCAACTTCGTGCT 57.272 40.909 0.00 0.00 0.00 4.40
2023 2147 5.786401 AAATAGATGACTCAACTTCGTGC 57.214 39.130 0.00 0.00 0.00 5.34
2024 2148 6.368791 TCCAAAATAGATGACTCAACTTCGTG 59.631 38.462 0.00 0.00 0.00 4.35
2025 2149 6.464222 TCCAAAATAGATGACTCAACTTCGT 58.536 36.000 0.00 0.00 0.00 3.85
2026 2150 6.968131 TCCAAAATAGATGACTCAACTTCG 57.032 37.500 0.00 0.00 0.00 3.79
2027 2151 7.237173 CGTTCCAAAATAGATGACTCAACTTC 58.763 38.462 0.00 0.00 0.00 3.01
2028 2152 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
2029 2153 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
2030 2154 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2031 2155 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2032 2156 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2033 2157 6.049149 TCATCCGTTCCAAAATAGATGACTC 58.951 40.000 0.00 0.00 33.94 3.36
2034 2158 5.989477 TCATCCGTTCCAAAATAGATGACT 58.011 37.500 0.00 0.00 33.94 3.41
2035 2159 6.316390 ACTTCATCCGTTCCAAAATAGATGAC 59.684 38.462 0.00 0.00 36.40 3.06
2036 2160 6.414732 ACTTCATCCGTTCCAAAATAGATGA 58.585 36.000 0.00 0.00 35.59 2.92
2037 2161 6.683974 ACTTCATCCGTTCCAAAATAGATG 57.316 37.500 0.00 0.00 32.30 2.90
2038 2162 8.980481 AATACTTCATCCGTTCCAAAATAGAT 57.020 30.769 0.00 0.00 0.00 1.98
2039 2163 8.801882 AAATACTTCATCCGTTCCAAAATAGA 57.198 30.769 0.00 0.00 0.00 1.98
2040 2164 7.850982 CGAAATACTTCATCCGTTCCAAAATAG 59.149 37.037 0.00 0.00 0.00 1.73
2041 2165 7.334921 ACGAAATACTTCATCCGTTCCAAAATA 59.665 33.333 0.00 0.00 0.00 1.40
2042 2166 6.150474 ACGAAATACTTCATCCGTTCCAAAAT 59.850 34.615 0.00 0.00 0.00 1.82
2043 2167 5.470777 ACGAAATACTTCATCCGTTCCAAAA 59.529 36.000 0.00 0.00 0.00 2.44
2044 2168 4.998672 ACGAAATACTTCATCCGTTCCAAA 59.001 37.500 0.00 0.00 0.00 3.28
2045 2169 4.571919 ACGAAATACTTCATCCGTTCCAA 58.428 39.130 0.00 0.00 0.00 3.53
2046 2170 4.196626 ACGAAATACTTCATCCGTTCCA 57.803 40.909 0.00 0.00 0.00 3.53
2047 2171 6.651755 TTTACGAAATACTTCATCCGTTCC 57.348 37.500 0.00 0.00 0.00 3.62
2049 2173 9.977762 GTAAATTTACGAAATACTTCATCCGTT 57.022 29.630 12.39 0.00 0.00 4.44
2050 2174 9.153721 TGTAAATTTACGAAATACTTCATCCGT 57.846 29.630 20.51 0.00 36.45 4.69
2055 2179 9.549509 GCACATGTAAATTTACGAAATACTTCA 57.450 29.630 20.51 2.75 36.45 3.02
2056 2180 9.006215 GGCACATGTAAATTTACGAAATACTTC 57.994 33.333 20.51 6.17 36.45 3.01
2057 2181 8.736244 AGGCACATGTAAATTTACGAAATACTT 58.264 29.630 20.51 5.26 36.45 2.24
2058 2182 8.181573 CAGGCACATGTAAATTTACGAAATACT 58.818 33.333 20.51 12.93 36.45 2.12
2059 2183 8.178964 TCAGGCACATGTAAATTTACGAAATAC 58.821 33.333 20.51 11.23 36.45 1.89
2060 2184 8.270080 TCAGGCACATGTAAATTTACGAAATA 57.730 30.769 20.51 5.93 36.45 1.40
2061 2185 7.151999 TCAGGCACATGTAAATTTACGAAAT 57.848 32.000 20.51 8.45 36.45 2.17
2062 2186 6.561737 TCAGGCACATGTAAATTTACGAAA 57.438 33.333 20.51 6.59 36.45 3.46
2063 2187 6.561737 TTCAGGCACATGTAAATTTACGAA 57.438 33.333 20.51 13.08 36.45 3.85
2064 2188 6.561737 TTTCAGGCACATGTAAATTTACGA 57.438 33.333 20.51 11.85 36.45 3.43
2065 2189 9.515020 AATATTTCAGGCACATGTAAATTTACG 57.485 29.630 20.51 11.53 36.45 3.18
2129 2253 9.859152 GAGGGAATACTTAGTTAGACTTACCTA 57.141 37.037 0.00 0.00 34.41 3.08
2130 2254 8.567851 AGAGGGAATACTTAGTTAGACTTACCT 58.432 37.037 0.00 0.72 35.89 3.08
2131 2255 8.765488 AGAGGGAATACTTAGTTAGACTTACC 57.235 38.462 0.00 0.00 0.00 2.85
2133 2257 9.418839 GGAAGAGGGAATACTTAGTTAGACTTA 57.581 37.037 0.00 0.00 0.00 2.24
2134 2258 8.123780 AGGAAGAGGGAATACTTAGTTAGACTT 58.876 37.037 0.00 0.00 0.00 3.01
2135 2259 7.654452 AGGAAGAGGGAATACTTAGTTAGACT 58.346 38.462 0.00 0.00 0.00 3.24
2136 2260 7.901283 AGGAAGAGGGAATACTTAGTTAGAC 57.099 40.000 0.00 0.00 0.00 2.59
2137 2261 8.912614 AAAGGAAGAGGGAATACTTAGTTAGA 57.087 34.615 0.00 0.00 0.00 2.10
2138 2262 9.961264 AAAAAGGAAGAGGGAATACTTAGTTAG 57.039 33.333 0.00 0.00 0.00 2.34
2227 2351 4.089361 CAGGCCCTGAAGAAATTTTAGGT 58.911 43.478 4.15 0.00 32.44 3.08
2271 2395 1.003233 GATTTGGTCGACAGGAGGGTT 59.997 52.381 18.91 0.00 0.00 4.11
2436 2560 2.284798 GACTGATTCCGCCGAGCTCA 62.285 60.000 15.40 0.00 0.00 4.26
2470 2594 0.604780 CCTGACAGTGGAGCCAACAG 60.605 60.000 0.93 0.00 0.00 3.16
2506 2630 1.270305 GCAGAGTTGTGTGCCTGTCTA 60.270 52.381 0.00 0.00 36.97 2.59
2524 2648 0.961019 GTGGTTCTGCATTGGAAGCA 59.039 50.000 13.24 13.24 45.05 3.91
2588 2712 2.298446 CTGGTATGATCCTGCGAGATGT 59.702 50.000 0.00 0.00 0.00 3.06
2789 2913 9.736414 CCTCATGAATATTCTGGAACAATCTAT 57.264 33.333 16.24 0.00 38.70 1.98
2794 2918 5.759059 AGCCTCATGAATATTCTGGAACAA 58.241 37.500 16.24 0.00 38.70 2.83
2820 2944 2.932614 CGGTTCCTATGCAGCTATATGC 59.067 50.000 0.00 0.00 46.68 3.14
2946 3070 1.465200 GGAGCTCATCCTACCCCGTC 61.465 65.000 17.19 0.00 45.64 4.79
3053 3177 2.264794 CCTGTACCGCTGTCCACC 59.735 66.667 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.