Multiple sequence alignment - TraesCS5A01G461000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G461000 chr5A 100.000 4330 0 0 1 4330 641223381 641219052 0.000000e+00 7997.0
1 TraesCS5A01G461000 chr5A 82.697 393 56 10 2548 2931 8014913 8014524 5.360000e-89 339.0
2 TraesCS5A01G461000 chr5A 81.841 402 56 12 2540 2931 7987257 7986863 5.400000e-84 322.0
3 TraesCS5A01G461000 chr5A 81.934 393 58 11 2548 2931 8045592 8045204 1.940000e-83 320.0
4 TraesCS5A01G461000 chr5A 82.152 381 54 11 2561 2931 7961873 7961497 9.040000e-82 315.0
5 TraesCS5A01G461000 chr5D 93.976 1577 68 15 1 1567 513540905 513539346 0.000000e+00 2361.0
6 TraesCS5A01G461000 chr5D 83.043 920 108 23 2940 3832 513538566 513537668 0.000000e+00 791.0
7 TraesCS5A01G461000 chr5D 89.525 611 51 3 1648 2245 513539318 513538708 0.000000e+00 761.0
8 TraesCS5A01G461000 chr5D 93.519 108 7 0 2422 2529 513538681 513538574 1.250000e-35 161.0
9 TraesCS5A01G461000 chr5B 93.906 722 26 5 879 1591 644449756 644449044 0.000000e+00 1074.0
10 TraesCS5A01G461000 chr5B 89.185 638 55 4 1621 2245 644448915 644448279 0.000000e+00 784.0
11 TraesCS5A01G461000 chr5B 82.155 919 105 23 2940 3832 644448137 644447252 0.000000e+00 734.0
12 TraesCS5A01G461000 chr5B 94.430 395 16 1 418 806 644450173 644449779 1.720000e-168 603.0
13 TraesCS5A01G461000 chr5B 91.453 117 10 0 2413 2529 644448261 644448145 1.250000e-35 161.0
14 TraesCS5A01G461000 chr5B 82.955 176 17 6 2760 2922 621135917 621136092 3.490000e-31 147.0
15 TraesCS5A01G461000 chr4B 85.224 379 37 11 2569 2931 73496213 73496588 5.290000e-99 372.0
16 TraesCS5A01G461000 chr2A 77.315 648 124 11 1677 2319 761519869 761520498 1.140000e-95 361.0
17 TraesCS5A01G461000 chr2A 76.814 634 108 26 935 1564 761903227 761902629 1.940000e-83 320.0
18 TraesCS5A01G461000 chr2A 78.706 479 78 14 1684 2150 762814197 762813731 9.100000e-77 298.0
19 TraesCS5A01G461000 chr2A 78.756 386 54 22 2548 2914 428906300 428905924 2.600000e-57 233.0
20 TraesCS5A01G461000 chr2A 80.272 294 50 8 2009 2297 761631483 761631193 9.430000e-52 215.0
21 TraesCS5A01G461000 chr2A 82.022 178 32 0 989 1166 762207027 762206850 7.500000e-33 152.0
22 TraesCS5A01G461000 chr2A 90.476 42 4 0 1583 1624 758599183 758599142 6.050000e-04 56.5
23 TraesCS5A01G461000 chr2D 77.551 637 101 16 933 1564 640015309 640015908 3.210000e-91 346.0
24 TraesCS5A01G461000 chr2D 80.612 294 49 8 2009 2297 637739007 637739297 2.030000e-53 220.0
25 TraesCS5A01G461000 chr2D 80.272 294 49 9 2009 2297 380975669 380975958 3.390000e-51 213.0
26 TraesCS5A01G461000 chr2B 84.000 250 25 8 1324 1567 795576503 795576743 4.360000e-55 226.0
27 TraesCS5A01G461000 chr2B 80.579 242 46 1 3003 3243 796023744 796023985 7.390000e-43 185.0
28 TraesCS5A01G461000 chr4D 83.817 241 33 5 2565 2801 49949686 49949924 1.570000e-54 224.0
29 TraesCS5A01G461000 chr4D 88.991 109 7 4 2743 2848 1234405 1234299 3.510000e-26 130.0
30 TraesCS5A01G461000 chr7B 86.364 198 13 8 2737 2920 484485037 484485234 2.040000e-48 204.0
31 TraesCS5A01G461000 chr7B 75.377 398 57 22 2548 2929 607321775 607322147 2.090000e-33 154.0
32 TraesCS5A01G461000 chr1B 81.181 271 34 12 2653 2910 315387496 315387762 7.340000e-48 202.0
33 TraesCS5A01G461000 chr7A 75.497 302 45 17 2651 2929 91301625 91301920 2.110000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G461000 chr5A 641219052 641223381 4329 True 7997.0 7997 100.00000 1 4330 1 chr5A.!!$R5 4329
1 TraesCS5A01G461000 chr5D 513537668 513540905 3237 True 1018.5 2361 90.01575 1 3832 4 chr5D.!!$R1 3831
2 TraesCS5A01G461000 chr5B 644447252 644450173 2921 True 671.2 1074 90.22580 418 3832 5 chr5B.!!$R1 3414
3 TraesCS5A01G461000 chr2A 761519869 761520498 629 False 361.0 361 77.31500 1677 2319 1 chr2A.!!$F1 642
4 TraesCS5A01G461000 chr2A 761902629 761903227 598 True 320.0 320 76.81400 935 1564 1 chr2A.!!$R4 629
5 TraesCS5A01G461000 chr2D 640015309 640015908 599 False 346.0 346 77.55100 933 1564 1 chr2D.!!$F3 631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
929 947 0.259938 ATTGGGGATCTTGGTCTGGC 59.740 55.0 0.0 0.0 0.00 4.85 F
1651 1794 0.771755 GGGACAGAGGGAGTGGTTTT 59.228 55.0 0.0 0.0 0.00 2.43 F
2364 2549 0.026803 CGCCACTAGAAAATCTGCGC 59.973 55.0 0.0 0.0 30.57 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2345 2530 0.026803 GCGCAGATTTTCTAGTGGCG 59.973 55.0 0.3 0.0 45.15 5.69 R
3301 3486 0.031994 CCCAAGTTTCCAACGCAAGG 59.968 55.0 0.0 0.0 46.39 3.61 R
3841 4053 0.040058 AGCATGGCCCACTGATTCAA 59.960 50.0 0.0 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 46 8.705594 CCCTTAGAATGAGTTATTCAAGAGGTA 58.294 37.037 10.01 0.00 46.20 3.08
50 53 7.921041 TGAGTTATTCAAGAGGTATCATCCT 57.079 36.000 0.00 0.00 34.97 3.24
57 60 3.834489 AGAGGTATCATCCTGCAGTTG 57.166 47.619 13.81 10.16 38.02 3.16
69 72 7.315142 TCATCCTGCAGTTGAATAATGAAAAC 58.685 34.615 13.81 0.00 0.00 2.43
70 73 6.024552 TCCTGCAGTTGAATAATGAAAACC 57.975 37.500 13.81 0.00 0.00 3.27
85 88 3.139397 TGAAAACCATACTTCCTGGTGGT 59.861 43.478 0.32 0.32 46.29 4.16
140 145 1.673168 AAATCTCCATGGAAGCTCGC 58.327 50.000 17.00 0.00 0.00 5.03
147 152 2.942796 ATGGAAGCTCGCGGTGTCA 61.943 57.895 6.13 0.00 0.00 3.58
148 153 2.125512 GGAAGCTCGCGGTGTCAT 60.126 61.111 6.13 0.00 0.00 3.06
167 172 5.046663 TGTCATTATTGGCTCGCTCCATATA 60.047 40.000 0.00 0.00 35.77 0.86
194 199 9.650539 CAATTCATATTCTGACCGATATTCTCT 57.349 33.333 0.00 0.00 32.17 3.10
263 272 2.656560 ACTCTGCATCGGTACTCAAC 57.343 50.000 0.00 0.00 0.00 3.18
288 297 8.599774 ACATCCGTGTTTGATTTTGTTTAAAAG 58.400 29.630 0.00 0.00 35.74 2.27
289 298 8.812329 CATCCGTGTTTGATTTTGTTTAAAAGA 58.188 29.630 0.00 0.00 39.01 2.52
291 300 9.204570 TCCGTGTTTGATTTTGTTTAAAAGAAA 57.795 25.926 0.00 0.00 39.01 2.52
319 331 5.924254 TGTTTAGGATATAGAATCCGCAACG 59.076 40.000 12.70 0.00 42.87 4.10
322 334 3.056749 AGGATATAGAATCCGCAACGTCC 60.057 47.826 0.00 0.00 42.87 4.79
416 428 4.082949 CCGCGTCCACAGTATTATCTATCA 60.083 45.833 4.92 0.00 0.00 2.15
421 433 7.649705 GCGTCCACAGTATTATCTATCATATGG 59.350 40.741 2.13 0.00 0.00 2.74
457 469 1.146041 GGCACCACACACAGAGACA 59.854 57.895 0.00 0.00 0.00 3.41
470 482 4.224594 ACACAGAGACACATTCATCCAGAT 59.775 41.667 0.00 0.00 0.00 2.90
528 540 0.991355 AGGCCGATACCAAATCCCCA 60.991 55.000 0.00 0.00 0.00 4.96
540 552 0.929244 AATCCCCATCCCCTTCACTG 59.071 55.000 0.00 0.00 0.00 3.66
546 558 0.393537 CATCCCCTTCACTGGACAGC 60.394 60.000 0.00 0.00 32.36 4.40
573 585 0.371645 GAAGCTCAATCGCCTTCACG 59.628 55.000 0.00 0.00 0.00 4.35
585 597 2.666190 TTCACGAGGCAGCAGCAC 60.666 61.111 2.65 0.00 44.61 4.40
730 748 1.669115 GGTCGCAGCTCTCTTGCAA 60.669 57.895 0.00 0.00 34.99 4.08
823 841 4.445385 GCCAAAGTCAACATTACTGCTTTG 59.555 41.667 0.00 0.00 41.12 2.77
825 843 6.734137 CCAAAGTCAACATTACTGCTTTGTA 58.266 36.000 11.99 0.00 40.35 2.41
875 893 8.638685 TCTTAATTTGTTCGGTACTGTATAGC 57.361 34.615 0.64 0.00 0.00 2.97
888 906 8.010540 CGGTACTGTATAGCATATCGATATCAC 58.989 40.741 15.08 10.39 0.00 3.06
906 924 8.618677 CGATATCACTATTAATTAGCTACCCGA 58.381 37.037 3.12 0.00 0.00 5.14
927 945 4.455606 GAGTAATTGGGGATCTTGGTCTG 58.544 47.826 0.00 0.00 0.00 3.51
929 947 0.259938 ATTGGGGATCTTGGTCTGGC 59.740 55.000 0.00 0.00 0.00 4.85
1017 1037 2.253603 CAAATGGAACGCAAAGCTAGC 58.746 47.619 6.62 6.62 0.00 3.42
1167 1187 7.012044 GGATTTGCAGTCGTTTATAAGGTATGT 59.988 37.037 0.00 0.00 0.00 2.29
1168 1188 8.951787 ATTTGCAGTCGTTTATAAGGTATGTA 57.048 30.769 0.00 0.00 0.00 2.29
1183 1203 7.986085 AAGGTATGTATACATTGCAATCCTC 57.014 36.000 22.90 4.33 36.11 3.71
1185 1205 7.693132 AGGTATGTATACATTGCAATCCTCAT 58.307 34.615 22.90 11.86 37.76 2.90
1341 1377 5.355350 GGAATTTCATCGAGAGGTTCAATGT 59.645 40.000 0.00 0.00 0.00 2.71
1392 1428 7.203255 AGTAAGATTTTTAGGATATTGCGCC 57.797 36.000 4.18 0.00 0.00 6.53
1550 1586 9.227777 GTGGCCTCTAACTTTTCTCTTTATTTA 57.772 33.333 3.32 0.00 0.00 1.40
1595 1640 9.817809 TGTCATATAACATCTACTTCCTTTGTC 57.182 33.333 0.00 0.00 0.00 3.18
1598 1643 4.993705 AACATCTACTTCCTTTGTCCCA 57.006 40.909 0.00 0.00 0.00 4.37
1599 1644 4.287766 ACATCTACTTCCTTTGTCCCAC 57.712 45.455 0.00 0.00 0.00 4.61
1603 1648 6.012858 ACATCTACTTCCTTTGTCCCACAATA 60.013 38.462 0.00 0.00 38.00 1.90
1606 1651 8.153221 TCTACTTCCTTTGTCCCACAATATAA 57.847 34.615 0.00 0.00 38.00 0.98
1608 1653 7.027874 ACTTCCTTTGTCCCACAATATAAGA 57.972 36.000 9.99 0.00 38.00 2.10
1609 1654 7.643123 ACTTCCTTTGTCCCACAATATAAGAT 58.357 34.615 9.99 0.00 38.00 2.40
1610 1655 7.557719 ACTTCCTTTGTCCCACAATATAAGATG 59.442 37.037 9.99 0.00 38.00 2.90
1611 1656 6.364701 TCCTTTGTCCCACAATATAAGATGG 58.635 40.000 0.00 0.00 38.00 3.51
1615 1660 8.429237 TTTGTCCCACAATATAAGATGGTTTT 57.571 30.769 0.00 0.00 38.00 2.43
1617 1662 6.127479 TGTCCCACAATATAAGATGGTTTTGC 60.127 38.462 0.00 0.00 0.00 3.68
1618 1663 5.954752 TCCCACAATATAAGATGGTTTTGCA 59.045 36.000 0.00 0.00 0.00 4.08
1620 1665 7.038729 TCCCACAATATAAGATGGTTTTGCAAA 60.039 33.333 8.05 8.05 0.00 3.68
1621 1666 7.064490 CCCACAATATAAGATGGTTTTGCAAAC 59.936 37.037 12.39 7.26 0.00 2.93
1622 1667 7.818930 CCACAATATAAGATGGTTTTGCAAACT 59.181 33.333 12.39 2.08 0.00 2.66
1623 1668 9.853555 CACAATATAAGATGGTTTTGCAAACTA 57.146 29.630 12.39 5.86 0.00 2.24
1634 1777 7.551585 TGGTTTTGCAAACTATATATTGTGGG 58.448 34.615 12.39 0.00 0.00 4.61
1637 1780 7.946381 TTTGCAAACTATATATTGTGGGACA 57.054 32.000 8.05 0.00 0.00 4.02
1646 1789 0.987294 ATTGTGGGACAGAGGGAGTG 59.013 55.000 0.00 0.00 41.80 3.51
1651 1794 0.771755 GGGACAGAGGGAGTGGTTTT 59.228 55.000 0.00 0.00 0.00 2.43
1661 1804 4.349365 AGGGAGTGGTTTTCAAAAGTCAA 58.651 39.130 0.00 0.00 0.00 3.18
1672 1815 8.542953 GGTTTTCAAAAGTCAAGACATCAAATC 58.457 33.333 2.72 0.00 0.00 2.17
1682 1825 4.196626 AGACATCAAATCGTAAACCCGA 57.803 40.909 0.00 0.00 41.73 5.14
1780 1923 5.394333 GGGTCTACAGTACCTTCATGAGAAC 60.394 48.000 0.00 0.00 37.18 3.01
1831 1974 6.877855 CAGCCAATATACTGCTTGATGATAGT 59.122 38.462 0.00 0.00 31.77 2.12
1844 1987 6.425114 GCTTGATGATAGTATGACACCGAAAT 59.575 38.462 0.00 0.00 0.00 2.17
1888 2031 2.916111 TGCTTCGACGAAAATCAAAGC 58.084 42.857 12.03 9.88 39.55 3.51
1890 2033 2.350388 GCTTCGACGAAAATCAAAGCCA 60.350 45.455 12.03 0.00 34.49 4.75
1900 2043 6.601613 ACGAAAATCAAAGCCAGGATATTACA 59.398 34.615 0.00 0.00 0.00 2.41
1943 2115 8.602328 CAATGTAAGCTAGATGACTTCTCTTTG 58.398 37.037 0.00 0.00 35.79 2.77
1963 2135 9.956720 CTCTTTGAATTAAAGTCAGTGTTTCAT 57.043 29.630 0.00 0.00 44.88 2.57
1972 2144 7.984422 AAAGTCAGTGTTTCATGATATGTCA 57.016 32.000 0.00 0.00 39.04 3.58
1974 2146 9.671279 AAAGTCAGTGTTTCATGATATGTCATA 57.329 29.630 4.46 0.00 43.14 2.15
1978 2154 9.617523 TCAGTGTTTCATGATATGTCATAATGT 57.382 29.630 4.46 0.00 43.14 2.71
2027 2212 9.777008 TCAAAACTTTTATAGGGGATATTTGGT 57.223 29.630 0.00 0.00 0.00 3.67
2060 2245 1.136085 CGAAGGTGGTGTAATTGCACG 60.136 52.381 18.67 3.66 40.08 5.34
2122 2307 3.635268 CTGACTGGGCAGAAGGGGC 62.635 68.421 0.00 0.00 38.14 5.80
2136 2321 1.056700 AGGGGCATCAAGCTACCGAT 61.057 55.000 0.00 0.00 44.79 4.18
2166 2351 9.988350 GTAAGAACAACATATGTCATTGTTAGG 57.012 33.333 19.45 2.21 44.45 2.69
2248 2433 7.498900 TCAAGGTCATACTTCGCATATTTTCAT 59.501 33.333 0.00 0.00 0.00 2.57
2253 2438 9.929722 GTCATACTTCGCATATTTTCATTACAA 57.070 29.630 0.00 0.00 0.00 2.41
2295 2480 8.298854 TGCATAATATCATTTATGGAAGCACAC 58.701 33.333 6.39 0.00 37.09 3.82
2297 2482 9.017509 CATAATATCATTTATGGAAGCACACCT 57.982 33.333 0.00 0.00 36.40 4.00
2298 2483 6.889301 ATATCATTTATGGAAGCACACCTG 57.111 37.500 0.00 0.00 0.00 4.00
2299 2484 2.754552 TCATTTATGGAAGCACACCTGC 59.245 45.455 0.00 0.00 44.63 4.85
2312 2497 2.996621 CACACCTGCTAGTAGAAAGCAC 59.003 50.000 9.72 0.00 44.78 4.40
2314 2499 3.261897 ACACCTGCTAGTAGAAAGCACAT 59.738 43.478 9.72 0.00 44.78 3.21
2318 2503 5.182001 ACCTGCTAGTAGAAAGCACATTTTG 59.818 40.000 9.72 0.00 44.78 2.44
2327 2512 4.621832 CACATTTTGCATGCCCCC 57.378 55.556 16.68 0.00 0.00 5.40
2346 2531 3.744559 CCCCCAAACAGTCACACG 58.255 61.111 0.00 0.00 0.00 4.49
2347 2532 2.551912 CCCCCAAACAGTCACACGC 61.552 63.158 0.00 0.00 0.00 5.34
2348 2533 2.551912 CCCCAAACAGTCACACGCC 61.552 63.158 0.00 0.00 0.00 5.68
2349 2534 1.821759 CCCAAACAGTCACACGCCA 60.822 57.895 0.00 0.00 0.00 5.69
2350 2535 1.355210 CCAAACAGTCACACGCCAC 59.645 57.895 0.00 0.00 0.00 5.01
2351 2536 1.095228 CCAAACAGTCACACGCCACT 61.095 55.000 0.00 0.00 0.00 4.00
2352 2537 1.577468 CAAACAGTCACACGCCACTA 58.423 50.000 0.00 0.00 0.00 2.74
2353 2538 1.526887 CAAACAGTCACACGCCACTAG 59.473 52.381 0.00 0.00 0.00 2.57
2354 2539 1.037493 AACAGTCACACGCCACTAGA 58.963 50.000 0.00 0.00 0.00 2.43
2355 2540 1.037493 ACAGTCACACGCCACTAGAA 58.963 50.000 0.00 0.00 0.00 2.10
2356 2541 1.411246 ACAGTCACACGCCACTAGAAA 59.589 47.619 0.00 0.00 0.00 2.52
2357 2542 2.159014 ACAGTCACACGCCACTAGAAAA 60.159 45.455 0.00 0.00 0.00 2.29
2358 2543 3.067106 CAGTCACACGCCACTAGAAAAT 58.933 45.455 0.00 0.00 0.00 1.82
2359 2544 3.123621 CAGTCACACGCCACTAGAAAATC 59.876 47.826 0.00 0.00 0.00 2.17
2360 2545 3.006967 AGTCACACGCCACTAGAAAATCT 59.993 43.478 0.00 0.00 0.00 2.40
2361 2546 3.123621 GTCACACGCCACTAGAAAATCTG 59.876 47.826 0.00 0.00 0.00 2.90
2362 2547 2.076863 ACACGCCACTAGAAAATCTGC 58.923 47.619 0.00 0.00 0.00 4.26
2363 2548 1.061131 CACGCCACTAGAAAATCTGCG 59.939 52.381 0.00 7.87 39.88 5.18
2364 2549 0.026803 CGCCACTAGAAAATCTGCGC 59.973 55.000 0.00 0.00 30.57 6.09
2365 2550 1.086696 GCCACTAGAAAATCTGCGCA 58.913 50.000 10.98 10.98 0.00 6.09
2366 2551 1.468520 GCCACTAGAAAATCTGCGCAA 59.531 47.619 13.05 2.72 0.00 4.85
2367 2552 2.098117 GCCACTAGAAAATCTGCGCAAT 59.902 45.455 13.05 5.33 0.00 3.56
2368 2553 3.312421 GCCACTAGAAAATCTGCGCAATA 59.688 43.478 13.05 2.35 0.00 1.90
2369 2554 4.023707 GCCACTAGAAAATCTGCGCAATAT 60.024 41.667 13.05 5.16 0.00 1.28
2370 2555 5.506317 GCCACTAGAAAATCTGCGCAATATT 60.506 40.000 13.05 11.75 0.00 1.28
2371 2556 6.293407 GCCACTAGAAAATCTGCGCAATATTA 60.293 38.462 13.05 0.00 0.00 0.98
2372 2557 7.639039 CCACTAGAAAATCTGCGCAATATTAA 58.361 34.615 13.05 1.27 0.00 1.40
2373 2558 8.292448 CCACTAGAAAATCTGCGCAATATTAAT 58.708 33.333 13.05 7.24 0.00 1.40
2374 2559 9.110617 CACTAGAAAATCTGCGCAATATTAATG 57.889 33.333 13.05 0.00 0.00 1.90
2375 2560 6.998258 AGAAAATCTGCGCAATATTAATGC 57.002 33.333 13.05 0.00 40.41 3.56
2376 2561 6.506147 AGAAAATCTGCGCAATATTAATGCA 58.494 32.000 13.05 7.83 44.01 3.96
2377 2562 6.979817 AGAAAATCTGCGCAATATTAATGCAA 59.020 30.769 13.05 3.16 44.01 4.08
2378 2563 6.758593 AAATCTGCGCAATATTAATGCAAG 57.241 33.333 13.05 0.00 44.01 4.01
2379 2564 3.631144 TCTGCGCAATATTAATGCAAGC 58.369 40.909 13.05 1.48 44.01 4.01
2380 2565 2.383450 TGCGCAATATTAATGCAAGCG 58.617 42.857 8.16 16.70 44.01 4.68
2390 2575 3.519202 TGCAAGCGCAGGAAAACA 58.481 50.000 11.47 0.00 45.36 2.83
2391 2576 2.040330 TGCAAGCGCAGGAAAACAT 58.960 47.368 11.47 0.00 45.36 2.71
2392 2577 0.318869 TGCAAGCGCAGGAAAACATG 60.319 50.000 11.47 0.00 45.36 3.21
2393 2578 1.010419 GCAAGCGCAGGAAAACATGG 61.010 55.000 11.47 0.00 38.36 3.66
2394 2579 0.388907 CAAGCGCAGGAAAACATGGG 60.389 55.000 11.47 0.00 0.00 4.00
2395 2580 0.539438 AAGCGCAGGAAAACATGGGA 60.539 50.000 11.47 0.00 0.00 4.37
2396 2581 0.539438 AGCGCAGGAAAACATGGGAA 60.539 50.000 11.47 0.00 0.00 3.97
2397 2582 0.388520 GCGCAGGAAAACATGGGAAC 60.389 55.000 0.30 0.00 0.00 3.62
2398 2583 1.247567 CGCAGGAAAACATGGGAACT 58.752 50.000 0.00 0.00 0.00 3.01
2399 2584 2.432444 CGCAGGAAAACATGGGAACTA 58.568 47.619 0.00 0.00 0.00 2.24
2400 2585 2.817258 CGCAGGAAAACATGGGAACTAA 59.183 45.455 0.00 0.00 0.00 2.24
2401 2586 3.254657 CGCAGGAAAACATGGGAACTAAA 59.745 43.478 0.00 0.00 0.00 1.85
2402 2587 4.261825 CGCAGGAAAACATGGGAACTAAAA 60.262 41.667 0.00 0.00 0.00 1.52
2403 2588 4.988540 GCAGGAAAACATGGGAACTAAAAC 59.011 41.667 0.00 0.00 0.00 2.43
2404 2589 5.452636 GCAGGAAAACATGGGAACTAAAACA 60.453 40.000 0.00 0.00 0.00 2.83
2405 2590 6.578023 CAGGAAAACATGGGAACTAAAACAA 58.422 36.000 0.00 0.00 0.00 2.83
2406 2591 7.216494 CAGGAAAACATGGGAACTAAAACAAT 58.784 34.615 0.00 0.00 0.00 2.71
2407 2592 7.171337 CAGGAAAACATGGGAACTAAAACAATG 59.829 37.037 0.00 0.00 0.00 2.82
2408 2593 6.073276 GGAAAACATGGGAACTAAAACAATGC 60.073 38.462 0.00 0.00 0.00 3.56
2409 2594 4.173036 ACATGGGAACTAAAACAATGCG 57.827 40.909 0.00 0.00 0.00 4.73
2410 2595 3.572255 ACATGGGAACTAAAACAATGCGT 59.428 39.130 0.00 0.00 0.00 5.24
2411 2596 4.762765 ACATGGGAACTAAAACAATGCGTA 59.237 37.500 0.00 0.00 0.00 4.42
2415 2600 7.633193 TGGGAACTAAAACAATGCGTAATAT 57.367 32.000 0.00 0.00 0.00 1.28
2420 2605 9.549509 GAACTAAAACAATGCGTAATATTCACA 57.450 29.630 0.00 0.00 0.00 3.58
2442 2627 9.617523 TCACATATCTTATCATTTGCAAGAAGA 57.382 29.630 0.00 5.86 32.38 2.87
2491 2676 7.789273 TTTGATCAAACATGAAAGTGCAATT 57.211 28.000 16.91 0.00 0.00 2.32
2493 2678 7.179927 TGATCAAACATGAAAGTGCAATTTG 57.820 32.000 18.01 6.17 33.05 2.32
2494 2679 5.406767 TCAAACATGAAAGTGCAATTTGC 57.593 34.783 18.01 14.49 45.29 3.68
2529 2714 6.566079 TCTGACTTGAATCTATTGGGACAT 57.434 37.500 0.00 0.00 39.30 3.06
2531 2716 8.267620 TCTGACTTGAATCTATTGGGACATAT 57.732 34.615 0.00 0.00 39.30 1.78
2533 2718 9.347240 CTGACTTGAATCTATTGGGACATATTT 57.653 33.333 0.00 0.00 39.30 1.40
2549 2734 9.533253 GGGACATATTTTACAGAAATTCATTGG 57.467 33.333 0.00 0.00 0.00 3.16
2552 2737 9.807649 ACATATTTTACAGAAATTCATTGGAGC 57.192 29.630 0.00 0.00 0.00 4.70
2555 2740 5.801350 TTACAGAAATTCATTGGAGCTCG 57.199 39.130 7.83 0.00 0.00 5.03
2556 2741 3.679389 ACAGAAATTCATTGGAGCTCGT 58.321 40.909 7.83 0.00 0.00 4.18
2557 2742 4.074970 ACAGAAATTCATTGGAGCTCGTT 58.925 39.130 7.83 0.00 0.00 3.85
2558 2743 4.520492 ACAGAAATTCATTGGAGCTCGTTT 59.480 37.500 7.83 0.29 0.00 3.60
2559 2744 5.705441 ACAGAAATTCATTGGAGCTCGTTTA 59.295 36.000 7.83 0.00 0.00 2.01
2560 2745 6.375455 ACAGAAATTCATTGGAGCTCGTTTAT 59.625 34.615 7.83 0.00 0.00 1.40
2561 2746 7.094205 ACAGAAATTCATTGGAGCTCGTTTATT 60.094 33.333 7.83 0.03 0.00 1.40
2562 2747 7.756722 CAGAAATTCATTGGAGCTCGTTTATTT 59.243 33.333 7.83 8.44 0.00 1.40
2563 2748 8.306761 AGAAATTCATTGGAGCTCGTTTATTTT 58.693 29.630 7.83 2.49 0.00 1.82
2564 2749 8.831715 AAATTCATTGGAGCTCGTTTATTTTT 57.168 26.923 7.83 0.63 0.00 1.94
2611 2796 8.728088 TTTAAATGCTTCGAAAATTCTGAGAC 57.272 30.769 0.00 0.00 0.00 3.36
2612 2797 6.566197 AAATGCTTCGAAAATTCTGAGACT 57.434 33.333 0.00 0.00 0.00 3.24
2613 2798 7.672983 AAATGCTTCGAAAATTCTGAGACTA 57.327 32.000 0.00 0.00 0.00 2.59
2614 2799 7.672983 AATGCTTCGAAAATTCTGAGACTAA 57.327 32.000 0.00 0.00 0.00 2.24
2615 2800 7.672983 ATGCTTCGAAAATTCTGAGACTAAA 57.327 32.000 0.00 0.00 0.00 1.85
2616 2801 7.672983 TGCTTCGAAAATTCTGAGACTAAAT 57.327 32.000 0.00 0.00 0.00 1.40
2617 2802 7.743104 TGCTTCGAAAATTCTGAGACTAAATC 58.257 34.615 0.00 0.00 0.00 2.17
2618 2803 7.148407 TGCTTCGAAAATTCTGAGACTAAATCC 60.148 37.037 0.00 0.00 0.00 3.01
2619 2804 7.148407 GCTTCGAAAATTCTGAGACTAAATCCA 60.148 37.037 0.00 0.00 0.00 3.41
2620 2805 7.596749 TCGAAAATTCTGAGACTAAATCCAC 57.403 36.000 0.00 0.00 0.00 4.02
2621 2806 7.158697 TCGAAAATTCTGAGACTAAATCCACA 58.841 34.615 0.00 0.00 0.00 4.17
2622 2807 7.331934 TCGAAAATTCTGAGACTAAATCCACAG 59.668 37.037 0.00 0.00 35.09 3.66
2623 2808 7.118390 CGAAAATTCTGAGACTAAATCCACAGT 59.882 37.037 0.00 0.00 35.23 3.55
2624 2809 9.436957 GAAAATTCTGAGACTAAATCCACAGTA 57.563 33.333 0.00 0.00 35.23 2.74
2625 2810 9.965902 AAAATTCTGAGACTAAATCCACAGTAT 57.034 29.630 0.00 0.00 35.23 2.12
2626 2811 8.954950 AATTCTGAGACTAAATCCACAGTATG 57.045 34.615 0.00 0.00 46.00 2.39
2627 2812 7.718334 TTCTGAGACTAAATCCACAGTATGA 57.282 36.000 0.00 0.00 39.69 2.15
2628 2813 7.904558 TCTGAGACTAAATCCACAGTATGAT 57.095 36.000 0.00 0.00 39.69 2.45
2629 2814 8.996651 TCTGAGACTAAATCCACAGTATGATA 57.003 34.615 0.00 0.00 39.69 2.15
2630 2815 9.593565 TCTGAGACTAAATCCACAGTATGATAT 57.406 33.333 0.00 0.00 39.69 1.63
2631 2816 9.636879 CTGAGACTAAATCCACAGTATGATATG 57.363 37.037 0.00 0.00 39.69 1.78
2632 2817 8.588472 TGAGACTAAATCCACAGTATGATATGG 58.412 37.037 0.00 0.00 39.69 2.74
2633 2818 8.727100 AGACTAAATCCACAGTATGATATGGA 57.273 34.615 0.00 0.00 45.12 3.41
2642 2827 9.297037 TCCACAGTATGATATGGATATATACCG 57.703 37.037 0.00 0.00 39.69 4.02
2643 2828 8.029522 CCACAGTATGATATGGATATATACCGC 58.970 40.741 0.00 0.00 39.69 5.68
2644 2829 8.576442 CACAGTATGATATGGATATATACCGCA 58.424 37.037 0.00 0.00 39.69 5.69
2645 2830 9.314133 ACAGTATGATATGGATATATACCGCAT 57.686 33.333 0.00 0.00 39.69 4.73
2650 2835 8.040716 TGATATGGATATATACCGCATACTCG 57.959 38.462 0.00 0.00 29.67 4.18
2651 2836 4.563337 TGGATATATACCGCATACTCGC 57.437 45.455 0.00 0.00 0.00 5.03
2652 2837 3.949113 TGGATATATACCGCATACTCGCA 59.051 43.478 0.00 0.00 0.00 5.10
2653 2838 4.399934 TGGATATATACCGCATACTCGCAA 59.600 41.667 0.00 0.00 0.00 4.85
2654 2839 5.105675 TGGATATATACCGCATACTCGCAAA 60.106 40.000 0.00 0.00 0.00 3.68
2655 2840 5.983720 GGATATATACCGCATACTCGCAAAT 59.016 40.000 0.00 0.00 0.00 2.32
2656 2841 6.479001 GGATATATACCGCATACTCGCAAATT 59.521 38.462 0.00 0.00 0.00 1.82
2657 2842 5.779806 ATATACCGCATACTCGCAAATTC 57.220 39.130 0.00 0.00 0.00 2.17
2658 2843 1.732941 ACCGCATACTCGCAAATTCA 58.267 45.000 0.00 0.00 0.00 2.57
2659 2844 2.288666 ACCGCATACTCGCAAATTCAT 58.711 42.857 0.00 0.00 0.00 2.57
2660 2845 2.032054 ACCGCATACTCGCAAATTCATG 59.968 45.455 0.00 0.00 0.00 3.07
2661 2846 2.287644 CCGCATACTCGCAAATTCATGA 59.712 45.455 0.00 0.00 0.00 3.07
2662 2847 3.058708 CCGCATACTCGCAAATTCATGAT 60.059 43.478 0.00 0.00 0.00 2.45
2663 2848 3.904234 CGCATACTCGCAAATTCATGATG 59.096 43.478 0.00 0.00 0.00 3.07
2664 2849 4.318974 CGCATACTCGCAAATTCATGATGA 60.319 41.667 0.00 0.00 0.00 2.92
2665 2850 5.513376 GCATACTCGCAAATTCATGATGAA 58.487 37.500 10.65 10.65 41.09 2.57
2666 2851 5.972973 GCATACTCGCAAATTCATGATGAAA 59.027 36.000 12.36 0.00 40.12 2.69
2667 2852 6.639686 GCATACTCGCAAATTCATGATGAAAT 59.360 34.615 12.36 0.17 40.12 2.17
2668 2853 7.804600 GCATACTCGCAAATTCATGATGAAATA 59.195 33.333 12.36 0.00 40.12 1.40
2669 2854 9.110617 CATACTCGCAAATTCATGATGAAATAC 57.889 33.333 12.36 1.86 40.12 1.89
2670 2855 7.087409 ACTCGCAAATTCATGATGAAATACA 57.913 32.000 12.36 0.00 40.12 2.29
2671 2856 7.709947 ACTCGCAAATTCATGATGAAATACAT 58.290 30.769 12.36 0.00 40.12 2.29
2672 2857 8.192774 ACTCGCAAATTCATGATGAAATACATT 58.807 29.630 12.36 0.00 40.12 2.71
2673 2858 9.667989 CTCGCAAATTCATGATGAAATACATTA 57.332 29.630 12.36 0.00 40.12 1.90
2683 2868 9.608617 CATGATGAAATACATTAACATGAGAGC 57.391 33.333 0.00 0.00 39.22 4.09
2684 2869 8.969260 TGATGAAATACATTAACATGAGAGCT 57.031 30.769 0.00 0.00 39.56 4.09
2687 2872 9.836864 ATGAAATACATTAACATGAGAGCTACA 57.163 29.630 0.00 0.00 35.45 2.74
2688 2873 9.098355 TGAAATACATTAACATGAGAGCTACAC 57.902 33.333 0.00 0.00 34.11 2.90
2689 2874 9.098355 GAAATACATTAACATGAGAGCTACACA 57.902 33.333 0.00 0.00 34.11 3.72
2690 2875 9.618890 AAATACATTAACATGAGAGCTACACAT 57.381 29.630 0.00 0.00 34.11 3.21
2693 2878 8.654230 ACATTAACATGAGAGCTACACATAAG 57.346 34.615 0.00 0.00 34.11 1.73
2694 2879 8.478066 ACATTAACATGAGAGCTACACATAAGA 58.522 33.333 0.00 0.00 34.11 2.10
2695 2880 9.317936 CATTAACATGAGAGCTACACATAAGAA 57.682 33.333 0.00 0.00 31.07 2.52
2696 2881 9.890629 ATTAACATGAGAGCTACACATAAGAAA 57.109 29.630 0.00 0.00 0.00 2.52
2697 2882 7.602517 AACATGAGAGCTACACATAAGAAAC 57.397 36.000 0.00 0.00 0.00 2.78
2698 2883 6.701340 ACATGAGAGCTACACATAAGAAACA 58.299 36.000 0.00 0.00 0.00 2.83
2699 2884 6.591834 ACATGAGAGCTACACATAAGAAACAC 59.408 38.462 0.00 0.00 0.00 3.32
2700 2885 6.096673 TGAGAGCTACACATAAGAAACACA 57.903 37.500 0.00 0.00 0.00 3.72
2701 2886 6.521162 TGAGAGCTACACATAAGAAACACAA 58.479 36.000 0.00 0.00 0.00 3.33
2702 2887 6.989759 TGAGAGCTACACATAAGAAACACAAA 59.010 34.615 0.00 0.00 0.00 2.83
2703 2888 7.661437 TGAGAGCTACACATAAGAAACACAAAT 59.339 33.333 0.00 0.00 0.00 2.32
2704 2889 8.396272 AGAGCTACACATAAGAAACACAAATT 57.604 30.769 0.00 0.00 0.00 1.82
2705 2890 8.292448 AGAGCTACACATAAGAAACACAAATTG 58.708 33.333 0.00 0.00 0.00 2.32
2706 2891 6.863126 AGCTACACATAAGAAACACAAATTGC 59.137 34.615 0.00 0.00 0.00 3.56
2707 2892 6.863126 GCTACACATAAGAAACACAAATTGCT 59.137 34.615 0.00 0.00 0.00 3.91
2708 2893 7.148918 GCTACACATAAGAAACACAAATTGCTG 60.149 37.037 0.00 0.00 0.00 4.41
2709 2894 6.804677 ACACATAAGAAACACAAATTGCTGA 58.195 32.000 0.00 0.00 0.00 4.26
2710 2895 6.697019 ACACATAAGAAACACAAATTGCTGAC 59.303 34.615 0.00 0.00 0.00 3.51
2711 2896 6.696583 CACATAAGAAACACAAATTGCTGACA 59.303 34.615 0.00 0.00 0.00 3.58
2712 2897 7.383029 CACATAAGAAACACAAATTGCTGACAT 59.617 33.333 0.00 0.00 0.00 3.06
2713 2898 7.927629 ACATAAGAAACACAAATTGCTGACATT 59.072 29.630 0.00 0.00 0.00 2.71
2714 2899 6.592798 AAGAAACACAAATTGCTGACATTG 57.407 33.333 0.00 0.00 0.00 2.82
2715 2900 5.904941 AGAAACACAAATTGCTGACATTGA 58.095 33.333 0.00 0.00 0.00 2.57
2716 2901 6.339730 AGAAACACAAATTGCTGACATTGAA 58.660 32.000 0.00 0.00 0.00 2.69
2717 2902 6.817641 AGAAACACAAATTGCTGACATTGAAA 59.182 30.769 0.00 0.00 0.00 2.69
2718 2903 6.981762 AACACAAATTGCTGACATTGAAAA 57.018 29.167 0.00 0.00 0.00 2.29
2719 2904 6.348621 ACACAAATTGCTGACATTGAAAAC 57.651 33.333 0.00 0.00 0.00 2.43
2720 2905 5.873712 ACACAAATTGCTGACATTGAAAACA 59.126 32.000 0.00 0.00 0.00 2.83
2721 2906 6.036300 ACACAAATTGCTGACATTGAAAACAG 59.964 34.615 0.00 0.00 0.00 3.16
2722 2907 6.036300 CACAAATTGCTGACATTGAAAACAGT 59.964 34.615 0.00 0.00 33.57 3.55
2723 2908 6.036300 ACAAATTGCTGACATTGAAAACAGTG 59.964 34.615 0.00 0.00 33.57 3.66
2724 2909 3.713858 TGCTGACATTGAAAACAGTGG 57.286 42.857 0.00 0.00 33.57 4.00
2725 2910 3.286353 TGCTGACATTGAAAACAGTGGA 58.714 40.909 0.00 0.00 33.57 4.02
2726 2911 3.066621 TGCTGACATTGAAAACAGTGGAC 59.933 43.478 0.00 0.00 33.57 4.02
2727 2912 3.066621 GCTGACATTGAAAACAGTGGACA 59.933 43.478 0.00 0.00 33.57 4.02
2728 2913 4.790766 GCTGACATTGAAAACAGTGGACAG 60.791 45.833 0.00 0.00 33.57 3.51
2729 2914 4.269183 TGACATTGAAAACAGTGGACAGT 58.731 39.130 0.00 0.00 0.00 3.55
2730 2915 4.096231 TGACATTGAAAACAGTGGACAGTG 59.904 41.667 5.63 5.63 37.75 3.66
2731 2916 4.016444 ACATTGAAAACAGTGGACAGTGT 58.984 39.130 6.95 6.95 46.18 3.55
2732 2917 4.142403 ACATTGAAAACAGTGGACAGTGTG 60.142 41.667 13.07 2.55 43.66 3.82
2733 2918 3.066291 TGAAAACAGTGGACAGTGTGT 57.934 42.857 13.07 5.38 43.66 3.72
2734 2919 2.746904 TGAAAACAGTGGACAGTGTGTG 59.253 45.455 13.07 0.00 43.66 3.82
2735 2920 2.489938 AAACAGTGGACAGTGTGTGT 57.510 45.000 13.07 0.00 43.66 3.72
2736 2921 3.620427 AAACAGTGGACAGTGTGTGTA 57.380 42.857 13.07 0.00 43.66 2.90
2737 2922 3.838244 AACAGTGGACAGTGTGTGTAT 57.162 42.857 13.07 0.00 43.66 2.29
2738 2923 3.838244 ACAGTGGACAGTGTGTGTATT 57.162 42.857 11.70 0.00 42.90 1.89
2739 2924 3.466836 ACAGTGGACAGTGTGTGTATTG 58.533 45.455 11.70 0.00 42.90 1.90
2740 2925 3.118408 ACAGTGGACAGTGTGTGTATTGT 60.118 43.478 11.70 0.00 42.90 2.71
2741 2926 3.876914 CAGTGGACAGTGTGTGTATTGTT 59.123 43.478 0.00 0.00 40.56 2.83
2742 2927 5.053811 CAGTGGACAGTGTGTGTATTGTTA 58.946 41.667 0.00 0.00 40.56 2.41
2743 2928 5.050363 CAGTGGACAGTGTGTGTATTGTTAC 60.050 44.000 0.00 0.00 40.56 2.50
2744 2929 5.054477 GTGGACAGTGTGTGTATTGTTACT 58.946 41.667 0.00 0.00 40.56 2.24
2745 2930 6.041182 AGTGGACAGTGTGTGTATTGTTACTA 59.959 38.462 0.00 0.00 40.56 1.82
2746 2931 6.872020 GTGGACAGTGTGTGTATTGTTACTAT 59.128 38.462 0.00 0.00 40.56 2.12
2747 2932 8.030692 GTGGACAGTGTGTGTATTGTTACTATA 58.969 37.037 0.00 0.00 40.56 1.31
2748 2933 8.755028 TGGACAGTGTGTGTATTGTTACTATAT 58.245 33.333 0.00 0.00 40.56 0.86
2778 2963 9.040939 ACCAATAATTTTCACTTTTTGTGTAGC 57.959 29.630 0.00 0.00 46.27 3.58
2779 2964 9.260002 CCAATAATTTTCACTTTTTGTGTAGCT 57.740 29.630 0.00 0.00 46.27 3.32
2782 2967 7.755582 AATTTTCACTTTTTGTGTAGCTCAC 57.244 32.000 0.00 0.00 46.27 3.51
2795 2980 6.589830 GTGTAGCTCACGAATCAATGTATT 57.410 37.500 0.00 0.00 37.31 1.89
2796 2981 7.005062 GTGTAGCTCACGAATCAATGTATTT 57.995 36.000 0.00 0.00 37.31 1.40
2797 2982 7.464358 GTGTAGCTCACGAATCAATGTATTTT 58.536 34.615 0.00 0.00 37.31 1.82
2798 2983 7.636359 GTGTAGCTCACGAATCAATGTATTTTC 59.364 37.037 0.00 0.00 37.31 2.29
2799 2984 6.992063 AGCTCACGAATCAATGTATTTTCT 57.008 33.333 0.00 0.00 0.00 2.52
2800 2985 7.009568 AGCTCACGAATCAATGTATTTTCTC 57.990 36.000 0.00 0.00 0.00 2.87
2801 2986 6.595326 AGCTCACGAATCAATGTATTTTCTCA 59.405 34.615 0.00 0.00 0.00 3.27
2802 2987 7.281774 AGCTCACGAATCAATGTATTTTCTCAT 59.718 33.333 0.00 0.00 0.00 2.90
2803 2988 7.375280 GCTCACGAATCAATGTATTTTCTCATG 59.625 37.037 0.00 0.00 0.00 3.07
2804 2989 8.491331 TCACGAATCAATGTATTTTCTCATGA 57.509 30.769 0.00 0.00 0.00 3.07
2805 2990 8.945057 TCACGAATCAATGTATTTTCTCATGAA 58.055 29.630 0.00 0.00 0.00 2.57
2806 2991 9.558648 CACGAATCAATGTATTTTCTCATGAAA 57.441 29.630 0.00 0.00 40.08 2.69
2850 3035 7.026631 ACATCCATATGTAAATGTGGAAACG 57.973 36.000 14.78 9.30 44.66 3.60
2851 3036 6.826231 ACATCCATATGTAAATGTGGAAACGA 59.174 34.615 14.78 0.00 44.66 3.85
2852 3037 7.338196 ACATCCATATGTAAATGTGGAAACGAA 59.662 33.333 14.78 0.00 44.66 3.85
2853 3038 7.873719 TCCATATGTAAATGTGGAAACGAAT 57.126 32.000 8.86 0.00 38.61 3.34
2854 3039 8.287439 TCCATATGTAAATGTGGAAACGAATT 57.713 30.769 8.86 0.00 38.61 2.17
2855 3040 8.744652 TCCATATGTAAATGTGGAAACGAATTT 58.255 29.630 8.86 0.00 38.61 1.82
2856 3041 9.364989 CCATATGTAAATGTGGAAACGAATTTT 57.635 29.630 2.44 0.00 35.13 1.82
2912 3097 2.280457 GCTCCATGTAGCCCGAGC 60.280 66.667 0.00 1.23 40.82 5.03
2913 3098 3.094062 GCTCCATGTAGCCCGAGCA 62.094 63.158 12.71 0.00 45.64 4.26
2914 3099 1.227380 CTCCATGTAGCCCGAGCAC 60.227 63.158 0.00 0.00 43.56 4.40
2915 3100 2.203070 CCATGTAGCCCGAGCACC 60.203 66.667 0.00 0.00 43.56 5.01
2916 3101 2.584064 CATGTAGCCCGAGCACCA 59.416 61.111 0.00 0.00 43.56 4.17
2917 3102 1.078497 CATGTAGCCCGAGCACCAA 60.078 57.895 0.00 0.00 43.56 3.67
2918 3103 0.676466 CATGTAGCCCGAGCACCAAA 60.676 55.000 0.00 0.00 43.56 3.28
2919 3104 0.037590 ATGTAGCCCGAGCACCAAAA 59.962 50.000 0.00 0.00 43.56 2.44
2920 3105 0.887387 TGTAGCCCGAGCACCAAAAC 60.887 55.000 0.00 0.00 43.56 2.43
2921 3106 1.669760 TAGCCCGAGCACCAAAACG 60.670 57.895 0.00 0.00 43.56 3.60
2922 3107 4.700365 GCCCGAGCACCAAAACGC 62.700 66.667 0.00 0.00 39.53 4.84
2923 3108 4.038080 CCCGAGCACCAAAACGCC 62.038 66.667 0.00 0.00 0.00 5.68
2924 3109 4.383602 CCGAGCACCAAAACGCCG 62.384 66.667 0.00 0.00 0.00 6.46
2926 3111 3.959975 GAGCACCAAAACGCCGCA 61.960 61.111 0.00 0.00 0.00 5.69
2927 3112 4.264638 AGCACCAAAACGCCGCAC 62.265 61.111 0.00 0.00 0.00 5.34
2928 3113 4.264638 GCACCAAAACGCCGCACT 62.265 61.111 0.00 0.00 0.00 4.40
2929 3114 2.051345 CACCAAAACGCCGCACTC 60.051 61.111 0.00 0.00 0.00 3.51
2930 3115 3.284449 ACCAAAACGCCGCACTCC 61.284 61.111 0.00 0.00 0.00 3.85
2931 3116 3.283684 CCAAAACGCCGCACTCCA 61.284 61.111 0.00 0.00 0.00 3.86
2932 3117 2.625823 CCAAAACGCCGCACTCCAT 61.626 57.895 0.00 0.00 0.00 3.41
2933 3118 1.302383 CCAAAACGCCGCACTCCATA 61.302 55.000 0.00 0.00 0.00 2.74
2934 3119 0.732571 CAAAACGCCGCACTCCATAT 59.267 50.000 0.00 0.00 0.00 1.78
2935 3120 1.132262 CAAAACGCCGCACTCCATATT 59.868 47.619 0.00 0.00 0.00 1.28
2936 3121 1.459450 AAACGCCGCACTCCATATTT 58.541 45.000 0.00 0.00 0.00 1.40
2937 3122 1.459450 AACGCCGCACTCCATATTTT 58.541 45.000 0.00 0.00 0.00 1.82
2938 3123 2.319136 ACGCCGCACTCCATATTTTA 57.681 45.000 0.00 0.00 0.00 1.52
2989 3174 5.423886 TGATGCTTAAATGTATGTGGTCGA 58.576 37.500 0.00 0.00 0.00 4.20
3000 3185 6.918892 TGTATGTGGTCGATAATTTTCCTG 57.081 37.500 0.00 0.00 0.00 3.86
3005 3190 8.833231 ATGTGGTCGATAATTTTCCTGTATAG 57.167 34.615 0.00 0.00 0.00 1.31
3006 3191 7.788026 TGTGGTCGATAATTTTCCTGTATAGT 58.212 34.615 0.00 0.00 0.00 2.12
3009 3194 9.976511 TGGTCGATAATTTTCCTGTATAGTAAG 57.023 33.333 0.00 0.00 0.00 2.34
3024 3209 7.564793 TGTATAGTAAGATGTTGCTGGTTCAT 58.435 34.615 3.34 0.00 30.32 2.57
3026 3211 7.944729 ATAGTAAGATGTTGCTGGTTCATTT 57.055 32.000 3.34 0.00 30.32 2.32
3027 3212 6.259550 AGTAAGATGTTGCTGGTTCATTTC 57.740 37.500 0.00 0.00 0.00 2.17
3049 3234 3.063452 CGTAGACCATAACACACCAATGC 59.937 47.826 0.00 0.00 0.00 3.56
3056 3241 6.060788 ACCATAACACACCAATGCAATTTTT 58.939 32.000 0.00 0.00 31.22 1.94
3080 3265 8.754991 TTTAGGTAATTGAAAGTTGGAGTGAA 57.245 30.769 0.00 0.00 0.00 3.18
3090 3275 2.777692 AGTTGGAGTGAAAGGTTGGAGA 59.222 45.455 0.00 0.00 0.00 3.71
3107 3292 4.361783 TGGAGAGATCCCAACAAGATACA 58.638 43.478 0.00 0.00 0.00 2.29
3114 3299 3.792401 TCCCAACAAGATACACTATGCG 58.208 45.455 0.00 0.00 0.00 4.73
3119 3304 5.220472 CCAACAAGATACACTATGCGAACAG 60.220 44.000 0.00 0.00 0.00 3.16
3193 3378 3.502123 AAGGCCAACTAGTGCACTAAA 57.498 42.857 25.95 8.60 0.00 1.85
3198 3383 6.895782 AGGCCAACTAGTGCACTAAATATAA 58.104 36.000 25.95 5.55 0.00 0.98
3240 3425 5.893500 TGGAAACAACCCAGGTATATCAAA 58.106 37.500 0.00 0.00 37.44 2.69
3242 3427 6.957020 TGGAAACAACCCAGGTATATCAAAAT 59.043 34.615 0.00 0.00 37.44 1.82
3247 3432 7.619965 ACAACCCAGGTATATCAAAATTTTGG 58.380 34.615 26.45 11.10 38.66 3.28
3278 3463 9.733556 TTATGTATTGCTTTCTTTACTTCTGGA 57.266 29.630 0.00 0.00 0.00 3.86
3291 3476 4.839668 ACTTCTGGATCGCTACAGATAC 57.160 45.455 1.23 0.00 42.73 2.24
3296 3481 2.885266 TGGATCGCTACAGATACCACTC 59.115 50.000 0.00 0.00 30.40 3.51
3297 3482 2.095668 GGATCGCTACAGATACCACTCG 60.096 54.545 0.00 0.00 0.00 4.18
3298 3483 2.320745 TCGCTACAGATACCACTCGA 57.679 50.000 0.00 0.00 0.00 4.04
3301 3486 3.250280 TCGCTACAGATACCACTCGAATC 59.750 47.826 0.00 0.00 0.00 2.52
3306 3491 3.126831 CAGATACCACTCGAATCCTTGC 58.873 50.000 0.00 0.00 0.00 4.01
3308 3493 0.892755 TACCACTCGAATCCTTGCGT 59.107 50.000 0.00 0.00 0.00 5.24
3309 3494 0.034896 ACCACTCGAATCCTTGCGTT 59.965 50.000 0.00 0.00 0.00 4.84
3310 3495 0.443869 CCACTCGAATCCTTGCGTTG 59.556 55.000 0.00 0.00 0.00 4.10
3311 3496 0.443869 CACTCGAATCCTTGCGTTGG 59.556 55.000 0.00 0.00 0.00 3.77
3312 3497 0.320374 ACTCGAATCCTTGCGTTGGA 59.680 50.000 0.00 0.00 38.06 3.53
3313 3498 1.270625 ACTCGAATCCTTGCGTTGGAA 60.271 47.619 0.00 0.00 37.13 3.53
3314 3499 1.804151 CTCGAATCCTTGCGTTGGAAA 59.196 47.619 0.00 0.00 37.13 3.13
3315 3500 1.533731 TCGAATCCTTGCGTTGGAAAC 59.466 47.619 0.00 0.00 45.31 2.78
3320 3505 0.031994 CCTTGCGTTGGAAACTTGGG 59.968 55.000 0.00 0.00 46.99 4.12
3322 3507 0.741915 TTGCGTTGGAAACTTGGGAC 59.258 50.000 0.00 0.00 46.99 4.46
3330 3515 3.230134 TGGAAACTTGGGACCATTTGAG 58.770 45.455 0.00 0.00 0.00 3.02
3333 3518 2.683211 ACTTGGGACCATTTGAGCTT 57.317 45.000 0.00 0.00 0.00 3.74
3339 3524 4.079253 TGGGACCATTTGAGCTTCTAAAC 58.921 43.478 0.00 0.00 0.00 2.01
3343 3528 5.063564 GGACCATTTGAGCTTCTAAACTACG 59.936 44.000 0.00 0.00 0.00 3.51
3362 3547 1.754745 AGCTTTGGTGCTCGAGGAA 59.245 52.632 15.58 0.00 39.34 3.36
3365 3550 2.027192 AGCTTTGGTGCTCGAGGAATAA 60.027 45.455 15.58 7.28 39.34 1.40
3368 3553 3.627395 TTGGTGCTCGAGGAATAATGT 57.373 42.857 15.58 0.00 0.00 2.71
3378 3563 3.983988 CGAGGAATAATGTCATGAGTCCG 59.016 47.826 10.44 0.00 0.00 4.79
3384 3569 6.089551 GGAATAATGTCATGAGTCCGATAACG 59.910 42.308 0.78 0.00 39.43 3.18
3388 3573 3.379057 TGTCATGAGTCCGATAACGCTAA 59.621 43.478 0.00 0.00 38.29 3.09
3389 3574 4.037565 TGTCATGAGTCCGATAACGCTAAT 59.962 41.667 0.00 0.00 38.29 1.73
3391 3576 4.982295 TCATGAGTCCGATAACGCTAATTG 59.018 41.667 0.00 0.00 38.29 2.32
3422 3617 3.193691 ACACATCCCTCTTTCGACACTAG 59.806 47.826 0.00 0.00 0.00 2.57
3616 3824 9.463443 GAAAGAAAAGATTTCCTTCATTCGAAA 57.537 29.630 0.00 0.00 33.02 3.46
3617 3825 9.468532 AAAGAAAAGATTTCCTTCATTCGAAAG 57.531 29.630 0.00 0.00 33.02 2.62
3622 3830 8.567285 AAGATTTCCTTCATTCGAAAGTACAT 57.433 30.769 0.00 0.00 31.85 2.29
3623 3831 9.667107 AAGATTTCCTTCATTCGAAAGTACATA 57.333 29.630 0.00 0.00 31.85 2.29
3624 3832 9.667107 AGATTTCCTTCATTCGAAAGTACATAA 57.333 29.630 0.00 0.00 31.85 1.90
3695 3907 7.340232 ACTTTTCCTCTGCTATGAATATGCAAA 59.660 33.333 0.00 0.00 36.22 3.68
3697 3909 6.812879 TCCTCTGCTATGAATATGCAAATG 57.187 37.500 0.00 0.00 36.22 2.32
3698 3910 6.301486 TCCTCTGCTATGAATATGCAAATGT 58.699 36.000 0.00 0.00 36.22 2.71
3701 3913 8.570488 CCTCTGCTATGAATATGCAAATGTAAA 58.430 33.333 0.00 0.00 36.22 2.01
3773 3985 6.293004 TGGTCAAAATCAGAAAAGTTTGGT 57.707 33.333 0.00 0.00 32.91 3.67
3774 3986 6.105333 TGGTCAAAATCAGAAAAGTTTGGTG 58.895 36.000 0.00 0.00 32.91 4.17
3777 3989 6.020678 GTCAAAATCAGAAAAGTTTGGTGTCG 60.021 38.462 0.00 0.00 32.91 4.35
3778 3990 4.568152 AATCAGAAAAGTTTGGTGTCGG 57.432 40.909 0.00 0.00 0.00 4.79
3779 3991 1.673920 TCAGAAAAGTTTGGTGTCGGC 59.326 47.619 0.00 0.00 0.00 5.54
3788 4000 0.321298 TTGGTGTCGGCCTTTCTAGC 60.321 55.000 0.00 0.00 0.00 3.42
3818 4030 5.538118 TGTAGTGTTGAACAGTGGATGTAG 58.462 41.667 15.51 0.00 43.00 2.74
3821 4033 5.057149 AGTGTTGAACAGTGGATGTAGTTC 58.943 41.667 4.61 0.00 43.00 3.01
3827 4039 5.010314 TGAACAGTGGATGTAGTTCTAACGT 59.990 40.000 0.00 0.00 43.00 3.99
3832 4044 8.092687 ACAGTGGATGTAGTTCTAACGTAATTT 58.907 33.333 0.00 0.00 41.60 1.82
3833 4045 8.380644 CAGTGGATGTAGTTCTAACGTAATTTG 58.619 37.037 0.00 0.00 0.00 2.32
3834 4046 8.092687 AGTGGATGTAGTTCTAACGTAATTTGT 58.907 33.333 0.00 0.00 0.00 2.83
3835 4047 8.715088 GTGGATGTAGTTCTAACGTAATTTGTT 58.285 33.333 0.00 1.98 0.00 2.83
3836 4048 9.926158 TGGATGTAGTTCTAACGTAATTTGTTA 57.074 29.630 0.00 3.77 0.00 2.41
3854 4066 8.947055 ATTTGTTATATTTTGAATCAGTGGGC 57.053 30.769 0.00 0.00 0.00 5.36
3855 4067 6.463995 TGTTATATTTTGAATCAGTGGGCC 57.536 37.500 0.00 0.00 0.00 5.80
3856 4068 5.954752 TGTTATATTTTGAATCAGTGGGCCA 59.045 36.000 0.00 0.00 0.00 5.36
3857 4069 6.610830 TGTTATATTTTGAATCAGTGGGCCAT 59.389 34.615 10.70 0.00 0.00 4.40
3858 4070 3.899052 ATTTTGAATCAGTGGGCCATG 57.101 42.857 10.70 9.60 0.00 3.66
3859 4071 0.896923 TTTGAATCAGTGGGCCATGC 59.103 50.000 10.70 0.00 0.00 4.06
3860 4072 0.040058 TTGAATCAGTGGGCCATGCT 59.960 50.000 10.70 0.00 0.00 3.79
3861 4073 0.040058 TGAATCAGTGGGCCATGCTT 59.960 50.000 10.70 7.12 0.00 3.91
3862 4074 1.284491 TGAATCAGTGGGCCATGCTTA 59.716 47.619 10.70 0.00 0.00 3.09
3863 4075 1.678101 GAATCAGTGGGCCATGCTTAC 59.322 52.381 10.70 0.00 0.00 2.34
3864 4076 0.921896 ATCAGTGGGCCATGCTTACT 59.078 50.000 10.70 0.00 0.00 2.24
3865 4077 0.698238 TCAGTGGGCCATGCTTACTT 59.302 50.000 10.70 0.00 0.00 2.24
3866 4078 1.075374 TCAGTGGGCCATGCTTACTTT 59.925 47.619 10.70 0.00 0.00 2.66
3867 4079 1.895131 CAGTGGGCCATGCTTACTTTT 59.105 47.619 10.70 0.00 0.00 2.27
3868 4080 3.088532 CAGTGGGCCATGCTTACTTTTA 58.911 45.455 10.70 0.00 0.00 1.52
3869 4081 3.509575 CAGTGGGCCATGCTTACTTTTAA 59.490 43.478 10.70 0.00 0.00 1.52
3870 4082 4.021544 CAGTGGGCCATGCTTACTTTTAAA 60.022 41.667 10.70 0.00 0.00 1.52
3871 4083 4.777366 AGTGGGCCATGCTTACTTTTAAAT 59.223 37.500 10.70 0.00 0.00 1.40
3872 4084 5.955355 AGTGGGCCATGCTTACTTTTAAATA 59.045 36.000 10.70 0.00 0.00 1.40
3873 4085 6.439058 AGTGGGCCATGCTTACTTTTAAATAA 59.561 34.615 10.70 0.00 0.00 1.40
3874 4086 7.038658 AGTGGGCCATGCTTACTTTTAAATAAA 60.039 33.333 10.70 0.00 0.00 1.40
3875 4087 7.604545 GTGGGCCATGCTTACTTTTAAATAAAA 59.395 33.333 10.70 0.00 34.35 1.52
3876 4088 8.157476 TGGGCCATGCTTACTTTTAAATAAAAA 58.843 29.630 0.00 0.00 35.04 1.94
3877 4089 9.173021 GGGCCATGCTTACTTTTAAATAAAAAT 57.827 29.630 4.39 0.00 36.49 1.82
3914 4126 7.817641 AGTGAAGCTAAGTTTTATTTGTAGGC 58.182 34.615 0.00 0.00 0.00 3.93
3915 4127 7.665974 AGTGAAGCTAAGTTTTATTTGTAGGCT 59.334 33.333 0.00 0.00 0.00 4.58
3916 4128 8.943002 GTGAAGCTAAGTTTTATTTGTAGGCTA 58.057 33.333 0.00 0.00 0.00 3.93
3917 4129 9.681062 TGAAGCTAAGTTTTATTTGTAGGCTAT 57.319 29.630 0.00 0.00 0.00 2.97
3968 4180 4.363991 AGAGATTCTCTTTGCCACAAGT 57.636 40.909 10.50 0.00 37.60 3.16
3969 4181 5.489792 AGAGATTCTCTTTGCCACAAGTA 57.510 39.130 10.50 0.00 37.60 2.24
3970 4182 5.241662 AGAGATTCTCTTTGCCACAAGTAC 58.758 41.667 10.50 0.00 37.60 2.73
3971 4183 4.973168 AGATTCTCTTTGCCACAAGTACA 58.027 39.130 0.00 0.00 0.00 2.90
3972 4184 5.376625 AGATTCTCTTTGCCACAAGTACAA 58.623 37.500 0.00 0.00 0.00 2.41
3973 4185 5.827797 AGATTCTCTTTGCCACAAGTACAAA 59.172 36.000 0.00 0.00 0.00 2.83
3974 4186 5.906113 TTCTCTTTGCCACAAGTACAAAA 57.094 34.783 0.00 0.00 33.24 2.44
3975 4187 6.463995 TTCTCTTTGCCACAAGTACAAAAT 57.536 33.333 0.00 0.00 33.24 1.82
3976 4188 6.463995 TCTCTTTGCCACAAGTACAAAATT 57.536 33.333 0.00 0.00 33.24 1.82
3977 4189 7.575414 TCTCTTTGCCACAAGTACAAAATTA 57.425 32.000 0.00 0.00 33.24 1.40
3978 4190 8.177119 TCTCTTTGCCACAAGTACAAAATTAT 57.823 30.769 0.00 0.00 33.24 1.28
3979 4191 8.637986 TCTCTTTGCCACAAGTACAAAATTATT 58.362 29.630 0.00 0.00 33.24 1.40
3980 4192 8.586570 TCTTTGCCACAAGTACAAAATTATTG 57.413 30.769 0.00 0.00 33.24 1.90
3981 4193 6.777526 TTGCCACAAGTACAAAATTATTGC 57.222 33.333 0.00 0.00 0.00 3.56
3982 4194 4.920340 TGCCACAAGTACAAAATTATTGCG 59.080 37.500 0.00 0.00 0.00 4.85
3983 4195 4.920927 GCCACAAGTACAAAATTATTGCGT 59.079 37.500 0.00 0.00 0.00 5.24
3984 4196 5.404066 GCCACAAGTACAAAATTATTGCGTT 59.596 36.000 0.00 0.00 0.00 4.84
3985 4197 6.615418 GCCACAAGTACAAAATTATTGCGTTG 60.615 38.462 0.00 0.00 0.00 4.10
3986 4198 6.419413 CCACAAGTACAAAATTATTGCGTTGT 59.581 34.615 0.00 0.24 37.86 3.32
3987 4199 7.358023 CCACAAGTACAAAATTATTGCGTTGTC 60.358 37.037 0.00 0.00 35.82 3.18
3988 4200 6.358558 ACAAGTACAAAATTATTGCGTTGTCG 59.641 34.615 0.00 0.00 35.82 4.35
3989 4201 5.387279 AGTACAAAATTATTGCGTTGTCGG 58.613 37.500 0.00 0.00 35.82 4.79
3990 4202 3.570559 ACAAAATTATTGCGTTGTCGGG 58.429 40.909 0.00 0.00 37.56 5.14
3991 4203 2.271821 AAATTATTGCGTTGTCGGGC 57.728 45.000 0.00 0.00 37.56 6.13
3992 4204 1.459450 AATTATTGCGTTGTCGGGCT 58.541 45.000 0.00 0.00 37.56 5.19
3993 4205 1.459450 ATTATTGCGTTGTCGGGCTT 58.541 45.000 0.00 0.00 37.56 4.35
3994 4206 2.096220 TTATTGCGTTGTCGGGCTTA 57.904 45.000 0.00 0.00 37.56 3.09
3995 4207 2.096220 TATTGCGTTGTCGGGCTTAA 57.904 45.000 0.00 0.00 37.56 1.85
3996 4208 1.240256 ATTGCGTTGTCGGGCTTAAA 58.760 45.000 0.00 0.00 37.56 1.52
3997 4209 1.022735 TTGCGTTGTCGGGCTTAAAA 58.977 45.000 0.00 0.00 37.56 1.52
3998 4210 1.240256 TGCGTTGTCGGGCTTAAAAT 58.760 45.000 0.00 0.00 37.56 1.82
3999 4211 1.609555 TGCGTTGTCGGGCTTAAAATT 59.390 42.857 0.00 0.00 37.56 1.82
4000 4212 2.812591 TGCGTTGTCGGGCTTAAAATTA 59.187 40.909 0.00 0.00 37.56 1.40
4001 4213 3.440872 TGCGTTGTCGGGCTTAAAATTAT 59.559 39.130 0.00 0.00 37.56 1.28
4002 4214 4.082679 TGCGTTGTCGGGCTTAAAATTATT 60.083 37.500 0.00 0.00 37.56 1.40
4003 4215 5.123502 TGCGTTGTCGGGCTTAAAATTATTA 59.876 36.000 0.00 0.00 37.56 0.98
4004 4216 6.183360 TGCGTTGTCGGGCTTAAAATTATTAT 60.183 34.615 0.00 0.00 37.56 1.28
4005 4217 7.012138 TGCGTTGTCGGGCTTAAAATTATTATA 59.988 33.333 0.00 0.00 37.56 0.98
4006 4218 8.019094 GCGTTGTCGGGCTTAAAATTATTATAT 58.981 33.333 0.00 0.00 37.56 0.86
4007 4219 9.887406 CGTTGTCGGGCTTAAAATTATTATATT 57.113 29.630 0.00 0.00 0.00 1.28
4057 4269 9.788960 ATTCTGTACTTCTGTTTTCTTTGTTTC 57.211 29.630 0.00 0.00 0.00 2.78
4058 4270 8.561738 TCTGTACTTCTGTTTTCTTTGTTTCT 57.438 30.769 0.00 0.00 0.00 2.52
4059 4271 9.010029 TCTGTACTTCTGTTTTCTTTGTTTCTT 57.990 29.630 0.00 0.00 0.00 2.52
4060 4272 9.626045 CTGTACTTCTGTTTTCTTTGTTTCTTT 57.374 29.630 0.00 0.00 0.00 2.52
4061 4273 9.974980 TGTACTTCTGTTTTCTTTGTTTCTTTT 57.025 25.926 0.00 0.00 0.00 2.27
4085 4297 7.995463 TTTAGTTTTCATCGGTTTCTTTTGG 57.005 32.000 0.00 0.00 0.00 3.28
4086 4298 5.592104 AGTTTTCATCGGTTTCTTTTGGT 57.408 34.783 0.00 0.00 0.00 3.67
4087 4299 5.972935 AGTTTTCATCGGTTTCTTTTGGTT 58.027 33.333 0.00 0.00 0.00 3.67
4088 4300 6.403049 AGTTTTCATCGGTTTCTTTTGGTTT 58.597 32.000 0.00 0.00 0.00 3.27
4089 4301 6.876789 AGTTTTCATCGGTTTCTTTTGGTTTT 59.123 30.769 0.00 0.00 0.00 2.43
4090 4302 7.389330 AGTTTTCATCGGTTTCTTTTGGTTTTT 59.611 29.630 0.00 0.00 0.00 1.94
4116 4328 9.810545 TTCGACATATGTCTACATTTTCATACA 57.189 29.630 28.51 0.94 42.66 2.29
4117 4329 9.981114 TCGACATATGTCTACATTTTCATACAT 57.019 29.630 28.51 0.00 42.66 2.29
4135 4347 9.647797 TTCATACATACTGTACATTTTTCGTCT 57.352 29.630 0.00 0.00 35.42 4.18
4139 4351 8.997621 ACATACTGTACATTTTTCGTCTACAT 57.002 30.769 0.00 0.00 0.00 2.29
4140 4352 8.869897 ACATACTGTACATTTTTCGTCTACATG 58.130 33.333 0.00 0.00 0.00 3.21
4141 4353 9.083080 CATACTGTACATTTTTCGTCTACATGA 57.917 33.333 0.00 0.00 0.00 3.07
4142 4354 7.956420 ACTGTACATTTTTCGTCTACATGAA 57.044 32.000 0.00 0.00 0.00 2.57
4143 4355 8.373048 ACTGTACATTTTTCGTCTACATGAAA 57.627 30.769 0.00 0.00 36.00 2.69
4144 4356 8.832521 ACTGTACATTTTTCGTCTACATGAAAA 58.167 29.630 0.00 0.00 43.06 2.29
4179 4391 9.944663 ATACGCATTTAACGATTTTGAATACAT 57.055 25.926 0.00 0.00 0.00 2.29
4180 4392 8.103101 ACGCATTTAACGATTTTGAATACATG 57.897 30.769 0.00 0.00 0.00 3.21
4181 4393 7.965655 ACGCATTTAACGATTTTGAATACATGA 59.034 29.630 0.00 0.00 0.00 3.07
4182 4394 8.957028 CGCATTTAACGATTTTGAATACATGAT 58.043 29.630 0.00 0.00 0.00 2.45
4189 4401 9.859427 AACGATTTTGAATACATGATTGACATT 57.141 25.926 0.00 0.00 37.07 2.71
4190 4402 9.859427 ACGATTTTGAATACATGATTGACATTT 57.141 25.926 0.00 0.00 37.07 2.32
4256 4468 8.821147 ACTGTACATTTTCGTATACAGAAACA 57.179 30.769 15.24 12.88 44.81 2.83
4257 4469 9.431887 ACTGTACATTTTCGTATACAGAAACAT 57.568 29.630 15.24 12.62 44.81 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 24 9.995003 GATGATACCTCTTGAATAACTCATTCT 57.005 33.333 0.00 0.00 43.10 2.40
35 38 3.834489 ACTGCAGGATGATACCTCTTG 57.166 47.619 19.93 0.00 39.69 3.02
43 46 7.649533 TTTCATTATTCAACTGCAGGATGAT 57.350 32.000 19.93 13.24 39.69 2.45
46 49 6.211184 TGGTTTTCATTATTCAACTGCAGGAT 59.789 34.615 19.93 8.83 0.00 3.24
50 53 8.121305 AGTATGGTTTTCATTATTCAACTGCA 57.879 30.769 0.00 0.00 37.30 4.41
69 72 1.628340 TGTCACCACCAGGAAGTATGG 59.372 52.381 0.00 0.00 43.87 2.74
70 73 2.038426 TGTGTCACCACCAGGAAGTATG 59.962 50.000 0.00 0.00 41.09 2.39
128 131 2.434884 ACACCGCGAGCTTCCATG 60.435 61.111 8.23 0.00 0.00 3.66
140 145 0.304705 GCGAGCCAATAATGACACCG 59.695 55.000 0.00 0.00 0.00 4.94
147 152 5.420725 TGTATATGGAGCGAGCCAATAAT 57.579 39.130 0.62 0.00 42.16 1.28
148 153 4.882842 TGTATATGGAGCGAGCCAATAA 57.117 40.909 0.62 0.00 42.16 1.40
167 172 9.429359 GAGAATATCGGTCAGAATATGAATTGT 57.571 33.333 0.00 0.00 40.43 2.71
208 213 9.541143 AGAAAGAAAGAAAGAAACAAACAAACA 57.459 25.926 0.00 0.00 0.00 2.83
229 234 5.490139 TGCAGAGTTCTGACAAAAGAAAG 57.510 39.130 13.13 0.00 46.59 2.62
231 236 4.212004 CGATGCAGAGTTCTGACAAAAGAA 59.788 41.667 13.13 0.00 46.59 2.52
233 238 3.120408 CCGATGCAGAGTTCTGACAAAAG 60.120 47.826 13.13 6.40 46.59 2.27
263 272 8.812329 TCTTTTAAACAAAATCAAACACGGATG 58.188 29.630 0.00 0.00 0.00 3.51
289 298 9.654663 GCGGATTCTATATCCTAAACAGTATTT 57.345 33.333 0.00 0.00 36.07 1.40
291 300 8.362464 TGCGGATTCTATATCCTAAACAGTAT 57.638 34.615 0.00 0.00 36.07 2.12
307 319 1.736645 CACGGACGTTGCGGATTCT 60.737 57.895 0.00 0.00 34.75 2.40
421 433 4.066139 AGCAGCATCCCAACCCCC 62.066 66.667 0.00 0.00 0.00 5.40
457 469 2.092592 TGAGCTGCATCTGGATGAATGT 60.093 45.455 13.96 0.00 41.20 2.71
470 482 1.224069 GAGAACACGCTTGAGCTGCA 61.224 55.000 1.02 0.00 39.32 4.41
528 540 0.548682 AGCTGTCCAGTGAAGGGGAT 60.549 55.000 0.00 0.00 35.25 3.85
546 558 4.125703 AGGCGATTGAGCTTCAGATTTAG 58.874 43.478 0.00 0.00 37.29 1.85
697 715 4.752101 GCTGCGACCAATTAGTGATAATCT 59.248 41.667 0.00 0.00 0.00 2.40
730 748 0.389166 GCTTGACAGCGCAGTCTAGT 60.389 55.000 32.37 13.81 41.41 2.57
823 841 9.489084 TCACTCACCTGTATATTATGCAAATAC 57.511 33.333 0.00 0.00 0.00 1.89
825 843 9.224267 GATCACTCACCTGTATATTATGCAAAT 57.776 33.333 0.00 0.00 0.00 2.32
888 906 9.367444 CCAATTACTCGGGTAGCTAATTAATAG 57.633 37.037 0.00 0.00 34.52 1.73
906 924 3.203040 CCAGACCAAGATCCCCAATTACT 59.797 47.826 0.00 0.00 0.00 2.24
927 945 3.322254 ACTGTATGTAGTATGAGCCTGCC 59.678 47.826 0.00 0.00 0.00 4.85
968 986 8.135529 GTCAGTAAGCAATTAACCTGAAAAGTT 58.864 33.333 0.00 0.00 0.00 2.66
969 987 7.502561 AGTCAGTAAGCAATTAACCTGAAAAGT 59.497 33.333 0.00 0.00 0.00 2.66
970 988 7.805071 CAGTCAGTAAGCAATTAACCTGAAAAG 59.195 37.037 0.00 0.00 0.00 2.27
1017 1037 1.269723 TCTAGGTCACTTCGTGCAGTG 59.730 52.381 0.00 0.00 44.96 3.66
1167 1187 6.243148 AGCATGATGAGGATTGCAATGTATA 58.757 36.000 18.59 0.93 37.56 1.47
1168 1188 5.077564 AGCATGATGAGGATTGCAATGTAT 58.922 37.500 18.59 5.39 37.56 2.29
1183 1203 5.268544 CGAGTTACCAAATCAAGCATGATG 58.731 41.667 4.99 0.00 45.60 3.07
1185 1205 3.689161 CCGAGTTACCAAATCAAGCATGA 59.311 43.478 0.00 0.00 40.57 3.07
1225 1261 1.379044 GCATGCAGGCCCTGTTAGT 60.379 57.895 13.44 0.00 33.43 2.24
1247 1283 4.470334 TTGCCAATTATTCCCTGCTTTC 57.530 40.909 0.00 0.00 0.00 2.62
1341 1377 1.375908 GTGCTTGACCCGCATGAGA 60.376 57.895 0.00 0.00 39.89 3.27
1392 1428 1.207089 TCCATACTTCCTTGCCTGTCG 59.793 52.381 0.00 0.00 0.00 4.35
1511 1547 0.614979 AGGCCACATGGTCGTACTCT 60.615 55.000 5.01 0.00 46.49 3.24
1512 1548 0.179108 GAGGCCACATGGTCGTACTC 60.179 60.000 5.01 0.00 46.49 2.59
1513 1549 0.614979 AGAGGCCACATGGTCGTACT 60.615 55.000 5.01 0.00 46.49 2.73
1514 1550 1.108776 TAGAGGCCACATGGTCGTAC 58.891 55.000 5.01 0.00 46.49 3.67
1515 1551 1.479323 GTTAGAGGCCACATGGTCGTA 59.521 52.381 5.01 0.00 46.49 3.43
1516 1552 0.249398 GTTAGAGGCCACATGGTCGT 59.751 55.000 5.01 0.00 46.49 4.34
1591 1636 7.578571 GCAAAACCATCTTATATTGTGGGACAA 60.579 37.037 0.00 0.00 44.16 3.18
1592 1637 6.127479 GCAAAACCATCTTATATTGTGGGACA 60.127 38.462 0.00 0.00 36.05 4.02
1595 1640 6.219417 TGCAAAACCATCTTATATTGTGGG 57.781 37.500 0.00 0.00 36.05 4.61
1608 1653 8.203485 CCCACAATATATAGTTTGCAAAACCAT 58.797 33.333 14.67 9.71 0.00 3.55
1609 1654 7.397476 TCCCACAATATATAGTTTGCAAAACCA 59.603 33.333 14.67 2.11 0.00 3.67
1610 1655 7.704899 GTCCCACAATATATAGTTTGCAAAACC 59.295 37.037 14.67 2.18 0.00 3.27
1611 1656 8.247562 TGTCCCACAATATATAGTTTGCAAAAC 58.752 33.333 14.67 8.45 0.00 2.43
1615 1660 6.894682 TCTGTCCCACAATATATAGTTTGCA 58.105 36.000 0.00 0.00 0.00 4.08
1617 1662 6.936900 CCCTCTGTCCCACAATATATAGTTTG 59.063 42.308 0.00 0.00 0.00 2.93
1618 1663 6.849697 TCCCTCTGTCCCACAATATATAGTTT 59.150 38.462 0.00 0.00 0.00 2.66
1620 1665 5.977533 TCCCTCTGTCCCACAATATATAGT 58.022 41.667 0.00 0.00 0.00 2.12
1621 1666 6.019748 ACTCCCTCTGTCCCACAATATATAG 58.980 44.000 0.00 0.00 0.00 1.31
1622 1667 5.780282 CACTCCCTCTGTCCCACAATATATA 59.220 44.000 0.00 0.00 0.00 0.86
1623 1668 4.594920 CACTCCCTCTGTCCCACAATATAT 59.405 45.833 0.00 0.00 0.00 0.86
1630 1773 1.128188 AACCACTCCCTCTGTCCCAC 61.128 60.000 0.00 0.00 0.00 4.61
1631 1774 0.401395 AAACCACTCCCTCTGTCCCA 60.401 55.000 0.00 0.00 0.00 4.37
1634 1777 2.930826 TGAAAACCACTCCCTCTGTC 57.069 50.000 0.00 0.00 0.00 3.51
1637 1780 4.207955 GACTTTTGAAAACCACTCCCTCT 58.792 43.478 0.00 0.00 0.00 3.69
1646 1789 7.826260 TTTGATGTCTTGACTTTTGAAAACC 57.174 32.000 2.35 0.00 0.00 3.27
1651 1794 6.618287 ACGATTTGATGTCTTGACTTTTGA 57.382 33.333 2.35 0.00 0.00 2.69
1661 1804 4.196626 TCGGGTTTACGATTTGATGTCT 57.803 40.909 0.00 0.00 38.06 3.41
1672 1815 3.445857 GAGAGGAGAAATCGGGTTTACG 58.554 50.000 0.00 0.00 0.00 3.18
1682 1825 6.012945 GCATCTATAAAGGGGAGAGGAGAAAT 60.013 42.308 0.00 0.00 0.00 2.17
1780 1923 7.707893 GGTTTCAGATCCAAATGAACAATATGG 59.292 37.037 0.00 0.00 35.25 2.74
1831 1974 8.240682 CCAAAATCAGTTAATTTCGGTGTCATA 58.759 33.333 0.00 0.00 0.00 2.15
1835 1978 6.264518 AGACCAAAATCAGTTAATTTCGGTGT 59.735 34.615 0.00 0.00 0.00 4.16
1844 1987 7.224753 GCATCTCGATAGACCAAAATCAGTTAA 59.775 37.037 0.00 0.00 42.67 2.01
1910 2053 6.784969 AGTCATCTAGCTTACATTGTCCCTAT 59.215 38.462 0.00 0.00 0.00 2.57
1951 2123 9.874215 CATTATGACATATCATGAAACACTGAC 57.126 33.333 0.00 0.00 45.54 3.51
1996 2172 9.951866 ATATCCCCTATAAAAGTTTTGACCAAT 57.048 29.630 11.18 0.00 0.00 3.16
2027 2212 1.667830 CCTTCGCGAAGTTCTGGCA 60.668 57.895 38.32 9.53 36.72 4.92
2136 2321 9.230122 ACAATGACATATGTTGTTCTTACATCA 57.770 29.630 10.30 0.00 39.18 3.07
2164 2349 8.427902 AAAGGAAATTGAGCTTTTATCTTCCT 57.572 30.769 8.95 8.95 42.47 3.36
2221 2406 7.335673 TGAAAATATGCGAAGTATGACCTTGAA 59.664 33.333 0.00 0.00 32.95 2.69
2227 2412 9.929722 TTGTAATGAAAATATGCGAAGTATGAC 57.070 29.630 0.00 0.00 32.95 3.06
2269 2454 8.298854 GTGTGCTTCCATAAATGATATTATGCA 58.701 33.333 0.00 0.00 40.41 3.96
2270 2455 7.756722 GGTGTGCTTCCATAAATGATATTATGC 59.243 37.037 2.30 0.00 40.41 3.14
2271 2456 9.017509 AGGTGTGCTTCCATAAATGATATTATG 57.982 33.333 0.00 0.00 41.08 1.90
2274 2459 7.281040 CAGGTGTGCTTCCATAAATGATATT 57.719 36.000 0.00 0.00 0.00 1.28
2329 2514 2.551912 GCGTGTGACTGTTTGGGGG 61.552 63.158 0.00 0.00 0.00 5.40
2330 2515 2.551912 GGCGTGTGACTGTTTGGGG 61.552 63.158 0.00 0.00 0.00 4.96
2331 2516 1.821759 TGGCGTGTGACTGTTTGGG 60.822 57.895 0.00 0.00 0.00 4.12
2332 2517 1.095228 AGTGGCGTGTGACTGTTTGG 61.095 55.000 0.00 0.00 0.00 3.28
2333 2518 1.526887 CTAGTGGCGTGTGACTGTTTG 59.473 52.381 0.00 0.00 0.00 2.93
2334 2519 1.411246 TCTAGTGGCGTGTGACTGTTT 59.589 47.619 0.00 0.00 0.00 2.83
2335 2520 1.037493 TCTAGTGGCGTGTGACTGTT 58.963 50.000 0.00 0.00 0.00 3.16
2336 2521 1.037493 TTCTAGTGGCGTGTGACTGT 58.963 50.000 0.00 0.00 0.00 3.55
2337 2522 2.148916 TTTCTAGTGGCGTGTGACTG 57.851 50.000 0.00 0.00 0.00 3.51
2338 2523 2.902705 TTTTCTAGTGGCGTGTGACT 57.097 45.000 0.00 0.00 0.00 3.41
2339 2524 3.123621 CAGATTTTCTAGTGGCGTGTGAC 59.876 47.826 0.00 0.00 0.00 3.67
2340 2525 3.325870 CAGATTTTCTAGTGGCGTGTGA 58.674 45.455 0.00 0.00 0.00 3.58
2341 2526 2.159653 GCAGATTTTCTAGTGGCGTGTG 60.160 50.000 0.00 0.00 0.00 3.82
2342 2527 2.076863 GCAGATTTTCTAGTGGCGTGT 58.923 47.619 0.00 0.00 0.00 4.49
2343 2528 1.061131 CGCAGATTTTCTAGTGGCGTG 59.939 52.381 0.00 0.00 38.36 5.34
2344 2529 1.359848 CGCAGATTTTCTAGTGGCGT 58.640 50.000 0.00 0.00 38.36 5.68
2345 2530 0.026803 GCGCAGATTTTCTAGTGGCG 59.973 55.000 0.30 0.00 45.15 5.69
2346 2531 1.086696 TGCGCAGATTTTCTAGTGGC 58.913 50.000 5.66 0.00 0.00 5.01
2347 2532 5.679734 ATATTGCGCAGATTTTCTAGTGG 57.320 39.130 11.31 0.00 0.00 4.00
2348 2533 9.110617 CATTAATATTGCGCAGATTTTCTAGTG 57.889 33.333 20.53 9.21 0.00 2.74
2349 2534 7.805071 GCATTAATATTGCGCAGATTTTCTAGT 59.195 33.333 20.53 4.84 0.00 2.57
2350 2535 7.804600 TGCATTAATATTGCGCAGATTTTCTAG 59.195 33.333 20.53 6.70 43.10 2.43
2351 2536 7.647228 TGCATTAATATTGCGCAGATTTTCTA 58.353 30.769 20.53 0.83 43.10 2.10
2352 2537 6.506147 TGCATTAATATTGCGCAGATTTTCT 58.494 32.000 20.53 7.20 43.10 2.52
2353 2538 6.752335 TGCATTAATATTGCGCAGATTTTC 57.248 33.333 20.53 10.65 43.10 2.29
2354 2539 6.292488 GCTTGCATTAATATTGCGCAGATTTT 60.292 34.615 20.53 15.25 43.10 1.82
2355 2540 5.176223 GCTTGCATTAATATTGCGCAGATTT 59.824 36.000 20.53 13.48 43.10 2.17
2356 2541 4.682860 GCTTGCATTAATATTGCGCAGATT 59.317 37.500 19.60 19.60 43.10 2.40
2357 2542 4.232221 GCTTGCATTAATATTGCGCAGAT 58.768 39.130 11.31 10.14 43.10 2.90
2358 2543 3.631144 GCTTGCATTAATATTGCGCAGA 58.369 40.909 11.31 2.77 43.10 4.26
2359 2544 2.402707 CGCTTGCATTAATATTGCGCAG 59.597 45.455 11.31 0.00 43.10 5.18
2360 2545 2.383450 CGCTTGCATTAATATTGCGCA 58.617 42.857 5.66 5.66 43.10 6.09
2362 2547 2.383450 TGCGCTTGCATTAATATTGCG 58.617 42.857 9.73 15.25 45.56 4.85
2374 2559 1.010419 CCATGTTTTCCTGCGCTTGC 61.010 55.000 9.73 0.00 39.78 4.01
2375 2560 0.388907 CCCATGTTTTCCTGCGCTTG 60.389 55.000 9.73 0.76 0.00 4.01
2376 2561 0.539438 TCCCATGTTTTCCTGCGCTT 60.539 50.000 9.73 0.00 0.00 4.68
2377 2562 0.539438 TTCCCATGTTTTCCTGCGCT 60.539 50.000 9.73 0.00 0.00 5.92
2378 2563 0.388520 GTTCCCATGTTTTCCTGCGC 60.389 55.000 0.00 0.00 0.00 6.09
2379 2564 1.247567 AGTTCCCATGTTTTCCTGCG 58.752 50.000 0.00 0.00 0.00 5.18
2380 2565 4.864704 TTTAGTTCCCATGTTTTCCTGC 57.135 40.909 0.00 0.00 0.00 4.85
2381 2566 6.155475 TGTTTTAGTTCCCATGTTTTCCTG 57.845 37.500 0.00 0.00 0.00 3.86
2382 2567 6.800072 TTGTTTTAGTTCCCATGTTTTCCT 57.200 33.333 0.00 0.00 0.00 3.36
2383 2568 6.073276 GCATTGTTTTAGTTCCCATGTTTTCC 60.073 38.462 0.00 0.00 0.00 3.13
2384 2569 6.346518 CGCATTGTTTTAGTTCCCATGTTTTC 60.347 38.462 0.00 0.00 0.00 2.29
2385 2570 5.465056 CGCATTGTTTTAGTTCCCATGTTTT 59.535 36.000 0.00 0.00 0.00 2.43
2386 2571 4.987912 CGCATTGTTTTAGTTCCCATGTTT 59.012 37.500 0.00 0.00 0.00 2.83
2387 2572 4.038642 ACGCATTGTTTTAGTTCCCATGTT 59.961 37.500 0.00 0.00 0.00 2.71
2388 2573 3.572255 ACGCATTGTTTTAGTTCCCATGT 59.428 39.130 0.00 0.00 0.00 3.21
2389 2574 4.173036 ACGCATTGTTTTAGTTCCCATG 57.827 40.909 0.00 0.00 0.00 3.66
2390 2575 5.968528 TTACGCATTGTTTTAGTTCCCAT 57.031 34.783 0.00 0.00 0.00 4.00
2391 2576 5.968528 ATTACGCATTGTTTTAGTTCCCA 57.031 34.783 0.00 0.00 0.00 4.37
2392 2577 8.185505 TGAATATTACGCATTGTTTTAGTTCCC 58.814 33.333 0.00 0.00 0.00 3.97
2393 2578 9.006215 GTGAATATTACGCATTGTTTTAGTTCC 57.994 33.333 0.00 0.00 0.00 3.62
2394 2579 9.549509 TGTGAATATTACGCATTGTTTTAGTTC 57.450 29.630 0.00 0.00 0.00 3.01
2465 2650 7.789273 TTGCACTTTCATGTTTGATCAAAAT 57.211 28.000 22.07 14.34 31.33 1.82
2491 2676 5.104817 TCAAGTCAGATCTATCACCATGCAA 60.105 40.000 0.00 0.00 0.00 4.08
2493 2678 4.953667 TCAAGTCAGATCTATCACCATGC 58.046 43.478 0.00 0.00 0.00 4.06
2494 2679 7.443477 AGATTCAAGTCAGATCTATCACCATG 58.557 38.462 0.00 0.00 0.00 3.66
2529 2714 8.397906 CGAGCTCCAATGAATTTCTGTAAAATA 58.602 33.333 8.47 0.00 0.00 1.40
2531 2716 6.206634 ACGAGCTCCAATGAATTTCTGTAAAA 59.793 34.615 8.47 0.00 0.00 1.52
2533 2718 5.245531 ACGAGCTCCAATGAATTTCTGTAA 58.754 37.500 8.47 0.00 0.00 2.41
2535 2720 3.679389 ACGAGCTCCAATGAATTTCTGT 58.321 40.909 8.47 0.00 0.00 3.41
2536 2721 4.691860 AACGAGCTCCAATGAATTTCTG 57.308 40.909 8.47 0.00 0.00 3.02
2537 2722 7.396540 AATAAACGAGCTCCAATGAATTTCT 57.603 32.000 8.47 0.00 0.00 2.52
2538 2723 8.466086 AAAATAAACGAGCTCCAATGAATTTC 57.534 30.769 8.47 0.00 0.00 2.17
2539 2724 8.831715 AAAAATAAACGAGCTCCAATGAATTT 57.168 26.923 8.47 4.61 0.00 1.82
2585 2770 9.346725 GTCTCAGAATTTTCGAAGCATTTAAAT 57.653 29.630 0.00 0.00 0.00 1.40
2586 2771 8.567948 AGTCTCAGAATTTTCGAAGCATTTAAA 58.432 29.630 0.00 0.00 0.00 1.52
2587 2772 8.099364 AGTCTCAGAATTTTCGAAGCATTTAA 57.901 30.769 0.00 0.00 0.00 1.52
2588 2773 7.672983 AGTCTCAGAATTTTCGAAGCATTTA 57.327 32.000 0.00 0.00 0.00 1.40
2589 2774 6.566197 AGTCTCAGAATTTTCGAAGCATTT 57.434 33.333 0.00 0.00 0.00 2.32
2590 2775 7.672983 TTAGTCTCAGAATTTTCGAAGCATT 57.327 32.000 0.00 0.97 0.00 3.56
2591 2776 7.672983 TTTAGTCTCAGAATTTTCGAAGCAT 57.327 32.000 0.00 0.00 0.00 3.79
2592 2777 7.148407 GGATTTAGTCTCAGAATTTTCGAAGCA 60.148 37.037 0.00 0.00 0.00 3.91
2593 2778 7.148407 TGGATTTAGTCTCAGAATTTTCGAAGC 60.148 37.037 0.00 0.00 0.00 3.86
2594 2779 8.171840 GTGGATTTAGTCTCAGAATTTTCGAAG 58.828 37.037 0.00 0.00 0.00 3.79
2595 2780 7.659799 TGTGGATTTAGTCTCAGAATTTTCGAA 59.340 33.333 0.00 0.00 0.00 3.71
2596 2781 7.158697 TGTGGATTTAGTCTCAGAATTTTCGA 58.841 34.615 0.00 0.00 0.00 3.71
2597 2782 7.118390 ACTGTGGATTTAGTCTCAGAATTTTCG 59.882 37.037 0.00 0.00 34.96 3.46
2598 2783 8.329203 ACTGTGGATTTAGTCTCAGAATTTTC 57.671 34.615 0.00 0.00 34.96 2.29
2599 2784 9.965902 ATACTGTGGATTTAGTCTCAGAATTTT 57.034 29.630 0.00 0.00 34.96 1.82
2600 2785 9.388506 CATACTGTGGATTTAGTCTCAGAATTT 57.611 33.333 0.00 0.00 34.96 1.82
2601 2786 8.762645 TCATACTGTGGATTTAGTCTCAGAATT 58.237 33.333 0.00 0.00 34.96 2.17
2602 2787 8.311395 TCATACTGTGGATTTAGTCTCAGAAT 57.689 34.615 0.00 0.00 34.96 2.40
2603 2788 7.718334 TCATACTGTGGATTTAGTCTCAGAA 57.282 36.000 0.00 0.00 34.96 3.02
2604 2789 7.904558 ATCATACTGTGGATTTAGTCTCAGA 57.095 36.000 0.00 0.00 34.96 3.27
2605 2790 9.636879 CATATCATACTGTGGATTTAGTCTCAG 57.363 37.037 2.78 0.00 36.04 3.35
2606 2791 8.588472 CCATATCATACTGTGGATTTAGTCTCA 58.412 37.037 2.78 0.00 33.53 3.27
2607 2792 8.807118 TCCATATCATACTGTGGATTTAGTCTC 58.193 37.037 2.78 0.00 35.91 3.36
2608 2793 8.727100 TCCATATCATACTGTGGATTTAGTCT 57.273 34.615 2.78 0.00 35.91 3.24
2616 2801 9.297037 CGGTATATATCCATATCATACTGTGGA 57.703 37.037 0.00 0.00 44.22 4.02
2617 2802 8.029522 GCGGTATATATCCATATCATACTGTGG 58.970 40.741 0.00 0.00 33.11 4.17
2618 2803 8.576442 TGCGGTATATATCCATATCATACTGTG 58.424 37.037 0.00 0.00 33.11 3.66
2619 2804 8.706322 TGCGGTATATATCCATATCATACTGT 57.294 34.615 0.00 0.00 33.11 3.55
2624 2809 8.678199 CGAGTATGCGGTATATATCCATATCAT 58.322 37.037 7.18 0.00 0.00 2.45
2625 2810 7.361799 GCGAGTATGCGGTATATATCCATATCA 60.362 40.741 7.18 0.00 0.00 2.15
2626 2811 6.967767 GCGAGTATGCGGTATATATCCATATC 59.032 42.308 7.18 6.07 0.00 1.63
2627 2812 6.433093 TGCGAGTATGCGGTATATATCCATAT 59.567 38.462 7.18 0.00 37.81 1.78
2628 2813 5.766174 TGCGAGTATGCGGTATATATCCATA 59.234 40.000 0.00 1.99 37.81 2.74
2629 2814 4.583073 TGCGAGTATGCGGTATATATCCAT 59.417 41.667 0.00 3.45 37.81 3.41
2630 2815 3.949113 TGCGAGTATGCGGTATATATCCA 59.051 43.478 0.00 0.00 37.81 3.41
2631 2816 4.563337 TGCGAGTATGCGGTATATATCC 57.437 45.455 0.00 0.00 37.81 2.59
2632 2817 7.222031 TGAATTTGCGAGTATGCGGTATATATC 59.778 37.037 0.00 0.00 37.81 1.63
2633 2818 7.039270 TGAATTTGCGAGTATGCGGTATATAT 58.961 34.615 0.00 0.00 37.81 0.86
2634 2819 6.391537 TGAATTTGCGAGTATGCGGTATATA 58.608 36.000 0.00 0.00 37.81 0.86
2635 2820 5.234752 TGAATTTGCGAGTATGCGGTATAT 58.765 37.500 0.00 0.00 37.81 0.86
2636 2821 4.623002 TGAATTTGCGAGTATGCGGTATA 58.377 39.130 0.00 0.00 37.81 1.47
2637 2822 3.462982 TGAATTTGCGAGTATGCGGTAT 58.537 40.909 0.00 0.00 37.81 2.73
2638 2823 2.894902 TGAATTTGCGAGTATGCGGTA 58.105 42.857 0.00 0.00 37.81 4.02
2639 2824 1.732941 TGAATTTGCGAGTATGCGGT 58.267 45.000 0.00 0.00 37.81 5.68
2640 2825 2.287644 TCATGAATTTGCGAGTATGCGG 59.712 45.455 0.00 0.00 37.81 5.69
2641 2826 3.590720 TCATGAATTTGCGAGTATGCG 57.409 42.857 0.00 0.00 37.81 4.73
2642 2827 5.099484 TCATCATGAATTTGCGAGTATGC 57.901 39.130 0.00 0.00 0.00 3.14
2643 2828 9.110617 GTATTTCATCATGAATTTGCGAGTATG 57.889 33.333 0.00 0.00 36.11 2.39
2644 2829 8.839343 TGTATTTCATCATGAATTTGCGAGTAT 58.161 29.630 0.00 0.00 36.11 2.12
2645 2830 8.207521 TGTATTTCATCATGAATTTGCGAGTA 57.792 30.769 0.00 0.00 36.11 2.59
2646 2831 7.087409 TGTATTTCATCATGAATTTGCGAGT 57.913 32.000 0.00 0.00 36.11 4.18
2647 2832 8.570096 AATGTATTTCATCATGAATTTGCGAG 57.430 30.769 0.00 0.00 36.11 5.03
2657 2842 9.608617 GCTCTCATGTTAATGTATTTCATCATG 57.391 33.333 0.00 0.00 37.49 3.07
2658 2843 9.570468 AGCTCTCATGTTAATGTATTTCATCAT 57.430 29.630 0.00 0.00 35.48 2.45
2659 2844 8.969260 AGCTCTCATGTTAATGTATTTCATCA 57.031 30.769 0.00 0.00 35.48 3.07
2661 2846 9.836864 TGTAGCTCTCATGTTAATGTATTTCAT 57.163 29.630 0.00 0.00 38.57 2.57
2662 2847 9.098355 GTGTAGCTCTCATGTTAATGTATTTCA 57.902 33.333 0.00 0.00 35.15 2.69
2663 2848 9.098355 TGTGTAGCTCTCATGTTAATGTATTTC 57.902 33.333 0.00 0.00 35.15 2.17
2664 2849 9.618890 ATGTGTAGCTCTCATGTTAATGTATTT 57.381 29.630 0.00 0.00 35.15 1.40
2667 2852 9.750125 CTTATGTGTAGCTCTCATGTTAATGTA 57.250 33.333 0.00 0.00 35.15 2.29
2668 2853 8.478066 TCTTATGTGTAGCTCTCATGTTAATGT 58.522 33.333 0.00 0.00 35.15 2.71
2669 2854 8.877808 TCTTATGTGTAGCTCTCATGTTAATG 57.122 34.615 0.00 0.00 33.23 1.90
2670 2855 9.890629 TTTCTTATGTGTAGCTCTCATGTTAAT 57.109 29.630 0.00 0.00 33.23 1.40
2671 2856 9.151471 GTTTCTTATGTGTAGCTCTCATGTTAA 57.849 33.333 0.00 0.00 33.23 2.01
2672 2857 8.311109 TGTTTCTTATGTGTAGCTCTCATGTTA 58.689 33.333 0.00 0.00 33.23 2.41
2673 2858 7.118390 GTGTTTCTTATGTGTAGCTCTCATGTT 59.882 37.037 0.00 0.00 33.23 2.71
2674 2859 6.591834 GTGTTTCTTATGTGTAGCTCTCATGT 59.408 38.462 0.00 0.00 33.23 3.21
2675 2860 6.591448 TGTGTTTCTTATGTGTAGCTCTCATG 59.409 38.462 0.00 0.00 33.23 3.07
2676 2861 6.701340 TGTGTTTCTTATGTGTAGCTCTCAT 58.299 36.000 0.00 0.00 35.03 2.90
2677 2862 6.096673 TGTGTTTCTTATGTGTAGCTCTCA 57.903 37.500 0.00 0.00 0.00 3.27
2678 2863 7.421530 TTTGTGTTTCTTATGTGTAGCTCTC 57.578 36.000 0.00 0.00 0.00 3.20
2679 2864 7.986085 ATTTGTGTTTCTTATGTGTAGCTCT 57.014 32.000 0.00 0.00 0.00 4.09
2680 2865 7.061094 GCAATTTGTGTTTCTTATGTGTAGCTC 59.939 37.037 0.00 0.00 0.00 4.09
2681 2866 6.863126 GCAATTTGTGTTTCTTATGTGTAGCT 59.137 34.615 0.00 0.00 0.00 3.32
2682 2867 6.863126 AGCAATTTGTGTTTCTTATGTGTAGC 59.137 34.615 0.00 0.00 0.00 3.58
2683 2868 8.075574 TCAGCAATTTGTGTTTCTTATGTGTAG 58.924 33.333 0.00 0.00 0.00 2.74
2684 2869 7.860373 GTCAGCAATTTGTGTTTCTTATGTGTA 59.140 33.333 0.00 0.00 0.00 2.90
2685 2870 6.697019 GTCAGCAATTTGTGTTTCTTATGTGT 59.303 34.615 0.00 0.00 0.00 3.72
2686 2871 6.696583 TGTCAGCAATTTGTGTTTCTTATGTG 59.303 34.615 0.00 0.00 0.00 3.21
2687 2872 6.804677 TGTCAGCAATTTGTGTTTCTTATGT 58.195 32.000 0.00 0.00 0.00 2.29
2688 2873 7.878477 ATGTCAGCAATTTGTGTTTCTTATG 57.122 32.000 0.00 0.00 0.00 1.90
2689 2874 8.143193 TCAATGTCAGCAATTTGTGTTTCTTAT 58.857 29.630 0.00 0.00 0.00 1.73
2690 2875 7.487484 TCAATGTCAGCAATTTGTGTTTCTTA 58.513 30.769 0.00 0.00 0.00 2.10
2691 2876 6.339730 TCAATGTCAGCAATTTGTGTTTCTT 58.660 32.000 0.00 0.00 0.00 2.52
2692 2877 5.904941 TCAATGTCAGCAATTTGTGTTTCT 58.095 33.333 0.00 0.00 0.00 2.52
2693 2878 6.586868 TTCAATGTCAGCAATTTGTGTTTC 57.413 33.333 0.00 0.00 0.00 2.78
2694 2879 6.981762 TTTCAATGTCAGCAATTTGTGTTT 57.018 29.167 0.00 0.00 0.00 2.83
2695 2880 6.370994 TGTTTTCAATGTCAGCAATTTGTGTT 59.629 30.769 0.00 0.00 0.00 3.32
2696 2881 5.873712 TGTTTTCAATGTCAGCAATTTGTGT 59.126 32.000 0.00 0.00 0.00 3.72
2697 2882 6.036300 ACTGTTTTCAATGTCAGCAATTTGTG 59.964 34.615 0.00 0.00 0.00 3.33
2698 2883 6.036300 CACTGTTTTCAATGTCAGCAATTTGT 59.964 34.615 0.00 0.00 0.00 2.83
2699 2884 6.415702 CACTGTTTTCAATGTCAGCAATTTG 58.584 36.000 0.00 0.00 0.00 2.32
2700 2885 5.524646 CCACTGTTTTCAATGTCAGCAATTT 59.475 36.000 0.00 0.00 0.00 1.82
2701 2886 5.051816 CCACTGTTTTCAATGTCAGCAATT 58.948 37.500 0.00 0.00 0.00 2.32
2702 2887 4.341806 TCCACTGTTTTCAATGTCAGCAAT 59.658 37.500 0.00 0.00 0.00 3.56
2703 2888 3.698539 TCCACTGTTTTCAATGTCAGCAA 59.301 39.130 0.00 0.00 0.00 3.91
2704 2889 3.066621 GTCCACTGTTTTCAATGTCAGCA 59.933 43.478 0.00 0.00 0.00 4.41
2705 2890 3.066621 TGTCCACTGTTTTCAATGTCAGC 59.933 43.478 0.00 0.00 0.00 4.26
2706 2891 4.336433 ACTGTCCACTGTTTTCAATGTCAG 59.664 41.667 0.00 0.00 35.28 3.51
2707 2892 4.096231 CACTGTCCACTGTTTTCAATGTCA 59.904 41.667 0.00 0.00 0.00 3.58
2708 2893 4.096382 ACACTGTCCACTGTTTTCAATGTC 59.904 41.667 0.00 0.00 0.00 3.06
2709 2894 4.016444 ACACTGTCCACTGTTTTCAATGT 58.984 39.130 0.00 0.00 0.00 2.71
2710 2895 4.142403 ACACACTGTCCACTGTTTTCAATG 60.142 41.667 0.00 0.00 0.00 2.82
2711 2896 4.016444 ACACACTGTCCACTGTTTTCAAT 58.984 39.130 0.00 0.00 0.00 2.57
2712 2897 3.190327 CACACACTGTCCACTGTTTTCAA 59.810 43.478 0.00 0.00 0.00 2.69
2713 2898 2.746904 CACACACTGTCCACTGTTTTCA 59.253 45.455 0.00 0.00 0.00 2.69
2714 2899 2.747446 ACACACACTGTCCACTGTTTTC 59.253 45.455 0.00 0.00 0.00 2.29
2715 2900 2.790433 ACACACACTGTCCACTGTTTT 58.210 42.857 0.00 0.00 0.00 2.43
2716 2901 2.489938 ACACACACTGTCCACTGTTT 57.510 45.000 0.00 0.00 0.00 2.83
2717 2902 3.838244 ATACACACACTGTCCACTGTT 57.162 42.857 0.00 0.00 33.91 3.16
2718 2903 3.118408 ACAATACACACACTGTCCACTGT 60.118 43.478 0.00 0.00 33.91 3.55
2719 2904 3.466836 ACAATACACACACTGTCCACTG 58.533 45.455 0.00 0.00 33.91 3.66
2720 2905 3.838244 ACAATACACACACTGTCCACT 57.162 42.857 0.00 0.00 33.91 4.00
2721 2906 5.054477 AGTAACAATACACACACTGTCCAC 58.946 41.667 0.00 0.00 34.29 4.02
2722 2907 5.284861 AGTAACAATACACACACTGTCCA 57.715 39.130 0.00 0.00 34.29 4.02
2772 2957 6.589830 AATACATTGATTCGTGAGCTACAC 57.410 37.500 6.31 6.31 45.11 2.90
2773 2958 7.549134 AGAAAATACATTGATTCGTGAGCTACA 59.451 33.333 0.00 0.00 0.00 2.74
2774 2959 7.910304 AGAAAATACATTGATTCGTGAGCTAC 58.090 34.615 0.00 0.00 0.00 3.58
2775 2960 7.763985 TGAGAAAATACATTGATTCGTGAGCTA 59.236 33.333 0.00 0.00 0.00 3.32
2776 2961 6.595326 TGAGAAAATACATTGATTCGTGAGCT 59.405 34.615 0.00 0.00 0.00 4.09
2777 2962 6.775088 TGAGAAAATACATTGATTCGTGAGC 58.225 36.000 0.00 0.00 0.00 4.26
2778 2963 8.606602 TCATGAGAAAATACATTGATTCGTGAG 58.393 33.333 0.00 0.00 0.00 3.51
2779 2964 8.491331 TCATGAGAAAATACATTGATTCGTGA 57.509 30.769 0.00 0.00 0.00 4.35
2780 2965 9.558648 TTTCATGAGAAAATACATTGATTCGTG 57.441 29.630 0.00 0.00 40.61 4.35
2824 3009 8.783093 CGTTTCCACATTTACATATGGATGTAT 58.217 33.333 16.34 0.00 45.77 2.29
2825 3010 7.988028 TCGTTTCCACATTTACATATGGATGTA 59.012 33.333 16.34 5.11 44.77 2.29
2827 3012 7.258022 TCGTTTCCACATTTACATATGGATG 57.742 36.000 7.80 10.38 40.87 3.51
2828 3013 7.873719 TTCGTTTCCACATTTACATATGGAT 57.126 32.000 7.80 0.00 40.87 3.41
2829 3014 7.873719 ATTCGTTTCCACATTTACATATGGA 57.126 32.000 7.80 0.00 39.50 3.41
2830 3015 8.925161 AAATTCGTTTCCACATTTACATATGG 57.075 30.769 7.80 0.00 0.00 2.74
2895 3080 2.280457 GCTCGGGCTACATGGAGC 60.280 66.667 22.57 22.57 44.24 4.70
2896 3081 1.227380 GTGCTCGGGCTACATGGAG 60.227 63.158 9.62 0.00 39.59 3.86
2897 3082 2.731571 GGTGCTCGGGCTACATGGA 61.732 63.158 9.62 0.00 39.59 3.41
2898 3083 2.203070 GGTGCTCGGGCTACATGG 60.203 66.667 9.62 0.00 39.59 3.66
2899 3084 0.676466 TTTGGTGCTCGGGCTACATG 60.676 55.000 9.62 0.00 39.59 3.21
2900 3085 0.037590 TTTTGGTGCTCGGGCTACAT 59.962 50.000 9.62 0.00 39.59 2.29
2901 3086 0.887387 GTTTTGGTGCTCGGGCTACA 60.887 55.000 9.62 4.27 39.59 2.74
2902 3087 1.873863 GTTTTGGTGCTCGGGCTAC 59.126 57.895 9.62 4.92 39.59 3.58
2903 3088 1.669760 CGTTTTGGTGCTCGGGCTA 60.670 57.895 9.62 0.00 39.59 3.93
2904 3089 2.978010 CGTTTTGGTGCTCGGGCT 60.978 61.111 9.62 0.00 39.59 5.19
2905 3090 4.700365 GCGTTTTGGTGCTCGGGC 62.700 66.667 0.00 0.00 39.26 6.13
2906 3091 4.038080 GGCGTTTTGGTGCTCGGG 62.038 66.667 0.00 0.00 0.00 5.14
2907 3092 4.383602 CGGCGTTTTGGTGCTCGG 62.384 66.667 0.00 0.00 0.00 4.63
2909 3094 3.959975 TGCGGCGTTTTGGTGCTC 61.960 61.111 9.37 0.00 0.00 4.26
2910 3095 4.264638 GTGCGGCGTTTTGGTGCT 62.265 61.111 9.37 0.00 0.00 4.40
2911 3096 4.264638 AGTGCGGCGTTTTGGTGC 62.265 61.111 9.37 0.00 0.00 5.01
2912 3097 2.051345 GAGTGCGGCGTTTTGGTG 60.051 61.111 9.37 0.00 0.00 4.17
2913 3098 3.284449 GGAGTGCGGCGTTTTGGT 61.284 61.111 9.37 0.00 0.00 3.67
2914 3099 1.302383 TATGGAGTGCGGCGTTTTGG 61.302 55.000 9.37 0.00 0.00 3.28
2915 3100 0.732571 ATATGGAGTGCGGCGTTTTG 59.267 50.000 9.37 0.00 0.00 2.44
2916 3101 1.459450 AATATGGAGTGCGGCGTTTT 58.541 45.000 9.37 0.00 0.00 2.43
2917 3102 1.459450 AAATATGGAGTGCGGCGTTT 58.541 45.000 9.37 0.00 0.00 3.60
2918 3103 1.459450 AAAATATGGAGTGCGGCGTT 58.541 45.000 9.37 0.00 0.00 4.84
2919 3104 1.937899 GTAAAATATGGAGTGCGGCGT 59.062 47.619 9.37 0.00 0.00 5.68
2920 3105 2.210116 AGTAAAATATGGAGTGCGGCG 58.790 47.619 0.51 0.51 0.00 6.46
2921 3106 4.632538 AAAGTAAAATATGGAGTGCGGC 57.367 40.909 0.00 0.00 0.00 6.53
2922 3107 9.268268 TCTATAAAAGTAAAATATGGAGTGCGG 57.732 33.333 0.00 0.00 0.00 5.69
2960 3145 9.019656 ACCACATACATTTAAGCATCAAACTAA 57.980 29.630 0.00 0.00 0.00 2.24
2978 3163 6.920569 ACAGGAAAATTATCGACCACATAC 57.079 37.500 0.00 0.00 0.00 2.39
2998 3183 7.041721 TGAACCAGCAACATCTTACTATACAG 58.958 38.462 0.00 0.00 0.00 2.74
3000 3185 8.438676 AATGAACCAGCAACATCTTACTATAC 57.561 34.615 0.00 0.00 0.00 1.47
3005 3190 5.088739 CGAAATGAACCAGCAACATCTTAC 58.911 41.667 0.00 0.00 0.00 2.34
3006 3191 4.759693 ACGAAATGAACCAGCAACATCTTA 59.240 37.500 0.00 0.00 0.00 2.10
3009 3194 3.559238 ACGAAATGAACCAGCAACATC 57.441 42.857 0.00 0.00 0.00 3.06
3024 3209 4.603989 TGGTGTGTTATGGTCTACGAAA 57.396 40.909 0.00 0.00 0.00 3.46
3026 3211 4.500127 CATTGGTGTGTTATGGTCTACGA 58.500 43.478 0.00 0.00 0.00 3.43
3027 3212 3.063452 GCATTGGTGTGTTATGGTCTACG 59.937 47.826 0.00 0.00 0.00 3.51
3056 3241 8.754991 TTTCACTCCAACTTTCAATTACCTAA 57.245 30.769 0.00 0.00 0.00 2.69
3090 3275 5.615289 GCATAGTGTATCTTGTTGGGATCT 58.385 41.667 0.00 0.00 0.00 2.75
3100 3285 6.017357 TCGTATCTGTTCGCATAGTGTATCTT 60.017 38.462 0.00 0.00 0.00 2.40
3107 3292 5.690816 CATACTCGTATCTGTTCGCATAGT 58.309 41.667 0.00 0.00 0.00 2.12
3114 3299 5.177142 TCTCGTAGCATACTCGTATCTGTTC 59.823 44.000 0.00 0.00 40.12 3.18
3119 3304 4.667161 GCTGTCTCGTAGCATACTCGTATC 60.667 50.000 0.00 0.00 40.12 2.24
3198 3383 7.390440 TGTTTCCATTTCACGAAGTCTATCAAT 59.610 33.333 0.00 0.00 41.61 2.57
3211 3396 2.698274 ACCTGGGTTGTTTCCATTTCAC 59.302 45.455 0.00 0.00 33.29 3.18
3224 3409 6.962902 TCCCAAAATTTTGATATACCTGGGTT 59.037 34.615 28.44 0.00 41.50 4.11
3226 3411 7.430760 TTCCCAAAATTTTGATATACCTGGG 57.569 36.000 28.44 19.41 42.03 4.45
3256 3441 7.402640 CGATCCAGAAGTAAAGAAAGCAATAC 58.597 38.462 0.00 0.00 0.00 1.89
3264 3449 5.417894 TCTGTAGCGATCCAGAAGTAAAGAA 59.582 40.000 0.00 0.00 34.88 2.52
3265 3450 4.948004 TCTGTAGCGATCCAGAAGTAAAGA 59.052 41.667 0.00 0.00 34.88 2.52
3266 3451 5.250235 TCTGTAGCGATCCAGAAGTAAAG 57.750 43.478 0.00 0.00 34.88 1.85
3271 3456 3.570125 TGGTATCTGTAGCGATCCAGAAG 59.430 47.826 0.00 0.00 40.81 2.85
3277 3462 2.806818 TCGAGTGGTATCTGTAGCGATC 59.193 50.000 0.00 0.00 0.00 3.69
3278 3463 2.847441 TCGAGTGGTATCTGTAGCGAT 58.153 47.619 0.00 0.00 0.00 4.58
3291 3476 0.443869 CAACGCAAGGATTCGAGTGG 59.556 55.000 0.00 0.00 46.39 4.00
3296 3481 1.535462 AGTTTCCAACGCAAGGATTCG 59.465 47.619 0.00 0.00 46.39 3.34
3297 3482 3.308530 CAAGTTTCCAACGCAAGGATTC 58.691 45.455 0.00 0.00 46.39 2.52
3298 3483 2.035832 CCAAGTTTCCAACGCAAGGATT 59.964 45.455 0.00 0.00 46.39 3.01
3301 3486 0.031994 CCCAAGTTTCCAACGCAAGG 59.968 55.000 0.00 0.00 46.39 3.61
3306 3491 1.616159 ATGGTCCCAAGTTTCCAACG 58.384 50.000 0.00 0.00 36.23 4.10
3308 3493 3.640967 CTCAAATGGTCCCAAGTTTCCAA 59.359 43.478 0.00 0.00 33.55 3.53
3309 3494 3.230134 CTCAAATGGTCCCAAGTTTCCA 58.770 45.455 0.00 0.00 0.00 3.53
3310 3495 2.029020 GCTCAAATGGTCCCAAGTTTCC 60.029 50.000 0.00 0.00 0.00 3.13
3311 3496 2.893489 AGCTCAAATGGTCCCAAGTTTC 59.107 45.455 0.00 0.00 0.00 2.78
3312 3497 2.962859 AGCTCAAATGGTCCCAAGTTT 58.037 42.857 0.00 0.00 0.00 2.66
3313 3498 2.683211 AGCTCAAATGGTCCCAAGTT 57.317 45.000 0.00 0.00 0.00 2.66
3314 3499 2.108952 AGAAGCTCAAATGGTCCCAAGT 59.891 45.455 0.00 0.00 0.00 3.16
3315 3500 2.800250 AGAAGCTCAAATGGTCCCAAG 58.200 47.619 0.00 0.00 0.00 3.61
3320 3505 5.867716 TCGTAGTTTAGAAGCTCAAATGGTC 59.132 40.000 0.00 0.00 0.00 4.02
3322 3507 5.220491 GCTCGTAGTTTAGAAGCTCAAATGG 60.220 44.000 0.00 0.00 0.00 3.16
3330 3515 3.995048 ACCAAAGCTCGTAGTTTAGAAGC 59.005 43.478 0.00 0.00 0.00 3.86
3333 3518 3.006537 AGCACCAAAGCTCGTAGTTTAGA 59.993 43.478 0.00 0.00 42.18 2.10
3356 3541 3.983988 CGGACTCATGACATTATTCCTCG 59.016 47.826 0.00 0.00 0.00 4.63
3359 3544 6.089551 CGTTATCGGACTCATGACATTATTCC 59.910 42.308 0.00 0.00 0.00 3.01
3362 3547 4.923871 GCGTTATCGGACTCATGACATTAT 59.076 41.667 0.00 0.00 37.56 1.28
3365 3550 2.362397 AGCGTTATCGGACTCATGACAT 59.638 45.455 0.00 0.00 37.56 3.06
3368 3553 4.848562 ATTAGCGTTATCGGACTCATGA 57.151 40.909 0.00 0.00 37.56 3.07
3384 3569 5.449177 GGGATGTGTGACTAAAGCAATTAGC 60.449 44.000 8.69 4.02 44.11 3.09
3388 3573 4.018960 AGAGGGATGTGTGACTAAAGCAAT 60.019 41.667 0.00 0.00 0.00 3.56
3389 3574 3.327757 AGAGGGATGTGTGACTAAAGCAA 59.672 43.478 0.00 0.00 0.00 3.91
3391 3576 3.618690 AGAGGGATGTGTGACTAAAGC 57.381 47.619 0.00 0.00 0.00 3.51
3590 3798 9.463443 TTTCGAATGAAGGAAATCTTTTCTTTC 57.537 29.630 14.41 14.41 36.16 2.62
3601 3809 7.881232 ACCTTATGTACTTTCGAATGAAGGAAA 59.119 33.333 23.78 4.64 34.96 3.13
3603 3811 6.942976 ACCTTATGTACTTTCGAATGAAGGA 58.057 36.000 23.78 5.96 34.96 3.36
3644 3856 8.087750 GTGATGGTCAAATTTAAACATTGGAGA 58.912 33.333 12.95 2.00 0.00 3.71
3658 3870 4.219288 GCAGAGGAAAAGTGATGGTCAAAT 59.781 41.667 0.00 0.00 0.00 2.32
3663 3875 4.225942 TCATAGCAGAGGAAAAGTGATGGT 59.774 41.667 0.00 0.00 0.00 3.55
3674 3886 6.301486 ACATTTGCATATTCATAGCAGAGGA 58.699 36.000 0.00 0.00 39.72 3.71
3749 3961 6.762661 CACCAAACTTTTCTGATTTTGACCAT 59.237 34.615 0.00 0.00 31.79 3.55
3752 3964 6.020678 CGACACCAAACTTTTCTGATTTTGAC 60.021 38.462 0.00 0.00 31.79 3.18
3767 3979 1.804748 CTAGAAAGGCCGACACCAAAC 59.195 52.381 0.00 0.00 0.00 2.93
3768 3980 1.880646 GCTAGAAAGGCCGACACCAAA 60.881 52.381 0.00 0.00 0.00 3.28
3773 3985 0.685097 ACTTGCTAGAAAGGCCGACA 59.315 50.000 15.22 0.00 0.00 4.35
3774 3986 1.337823 TGACTTGCTAGAAAGGCCGAC 60.338 52.381 14.24 1.19 33.94 4.79
3777 3989 2.716217 ACATGACTTGCTAGAAAGGCC 58.284 47.619 14.24 6.06 33.94 5.19
3778 3990 4.331168 CACTACATGACTTGCTAGAAAGGC 59.669 45.833 15.22 12.67 35.59 4.35
3779 3991 5.482908 ACACTACATGACTTGCTAGAAAGG 58.517 41.667 15.22 0.00 0.00 3.11
3788 4000 5.277490 CCACTGTTCAACACTACATGACTTG 60.277 44.000 0.00 0.00 0.00 3.16
3832 4044 5.954752 TGGCCCACTGATTCAAAATATAACA 59.045 36.000 0.00 0.00 0.00 2.41
3833 4045 6.463995 TGGCCCACTGATTCAAAATATAAC 57.536 37.500 0.00 0.00 0.00 1.89
3834 4046 6.462768 GCATGGCCCACTGATTCAAAATATAA 60.463 38.462 0.00 0.00 0.00 0.98
3835 4047 5.010922 GCATGGCCCACTGATTCAAAATATA 59.989 40.000 0.00 0.00 0.00 0.86
3836 4048 4.202284 GCATGGCCCACTGATTCAAAATAT 60.202 41.667 0.00 0.00 0.00 1.28
3837 4049 3.132646 GCATGGCCCACTGATTCAAAATA 59.867 43.478 0.00 0.00 0.00 1.40
3838 4050 2.093341 GCATGGCCCACTGATTCAAAAT 60.093 45.455 0.00 0.00 0.00 1.82
3839 4051 1.275856 GCATGGCCCACTGATTCAAAA 59.724 47.619 0.00 0.00 0.00 2.44
3840 4052 0.896923 GCATGGCCCACTGATTCAAA 59.103 50.000 0.00 0.00 0.00 2.69
3841 4053 0.040058 AGCATGGCCCACTGATTCAA 59.960 50.000 0.00 0.00 0.00 2.69
3842 4054 0.040058 AAGCATGGCCCACTGATTCA 59.960 50.000 0.00 0.00 0.00 2.57
3843 4055 1.678101 GTAAGCATGGCCCACTGATTC 59.322 52.381 0.00 0.00 0.00 2.52
3844 4056 1.285962 AGTAAGCATGGCCCACTGATT 59.714 47.619 0.00 2.80 0.00 2.57
3845 4057 0.921896 AGTAAGCATGGCCCACTGAT 59.078 50.000 0.00 0.00 0.00 2.90
3846 4058 0.698238 AAGTAAGCATGGCCCACTGA 59.302 50.000 0.00 0.00 0.00 3.41
3847 4059 1.549203 AAAGTAAGCATGGCCCACTG 58.451 50.000 0.00 0.00 0.00 3.66
3848 4060 2.309136 AAAAGTAAGCATGGCCCACT 57.691 45.000 0.00 0.00 0.00 4.00
3849 4061 4.529109 TTTAAAAGTAAGCATGGCCCAC 57.471 40.909 0.00 0.00 0.00 4.61
3850 4062 6.859112 TTATTTAAAAGTAAGCATGGCCCA 57.141 33.333 0.00 0.00 0.00 5.36
3851 4063 8.554835 TTTTTATTTAAAAGTAAGCATGGCCC 57.445 30.769 0.00 0.00 36.62 5.80
3888 4100 8.297426 GCCTACAAATAAAACTTAGCTTCACTT 58.703 33.333 0.00 0.00 0.00 3.16
3889 4101 7.665974 AGCCTACAAATAAAACTTAGCTTCACT 59.334 33.333 0.00 0.00 0.00 3.41
3890 4102 7.817641 AGCCTACAAATAAAACTTAGCTTCAC 58.182 34.615 0.00 0.00 0.00 3.18
3891 4103 7.996098 AGCCTACAAATAAAACTTAGCTTCA 57.004 32.000 0.00 0.00 0.00 3.02
3921 4133 9.990360 TTCAAAGTTGAATGTATACAGAGTACA 57.010 29.630 11.91 4.32 41.88 2.90
3924 4136 9.429359 CTCTTCAAAGTTGAATGTATACAGAGT 57.571 33.333 11.91 0.00 45.26 3.24
3925 4137 9.645059 TCTCTTCAAAGTTGAATGTATACAGAG 57.355 33.333 11.91 7.49 45.26 3.35
3950 4162 5.689383 TTGTACTTGTGGCAAAGAGAATC 57.311 39.130 13.77 0.00 0.00 2.52
3951 4163 6.463995 TTTTGTACTTGTGGCAAAGAGAAT 57.536 33.333 13.77 0.00 34.25 2.40
3952 4164 5.906113 TTTTGTACTTGTGGCAAAGAGAA 57.094 34.783 13.77 3.52 34.25 2.87
3953 4165 6.463995 AATTTTGTACTTGTGGCAAAGAGA 57.536 33.333 13.77 2.34 34.25 3.10
3954 4166 8.702438 CAATAATTTTGTACTTGTGGCAAAGAG 58.298 33.333 13.77 4.44 34.25 2.85
3955 4167 7.170658 GCAATAATTTTGTACTTGTGGCAAAGA 59.829 33.333 13.77 0.00 34.25 2.52
3956 4168 7.290118 GCAATAATTTTGTACTTGTGGCAAAG 58.710 34.615 0.00 0.00 34.25 2.77
3957 4169 6.074088 CGCAATAATTTTGTACTTGTGGCAAA 60.074 34.615 0.00 0.00 0.00 3.68
3958 4170 5.403766 CGCAATAATTTTGTACTTGTGGCAA 59.596 36.000 0.00 0.00 0.00 4.52
3959 4171 4.920340 CGCAATAATTTTGTACTTGTGGCA 59.080 37.500 0.00 0.00 0.00 4.92
3960 4172 4.920927 ACGCAATAATTTTGTACTTGTGGC 59.079 37.500 7.09 0.00 32.95 5.01
3961 4173 6.419413 ACAACGCAATAATTTTGTACTTGTGG 59.581 34.615 7.09 0.00 32.95 4.17
3962 4174 7.388290 ACAACGCAATAATTTTGTACTTGTG 57.612 32.000 0.00 0.00 34.41 3.33
3963 4175 6.358558 CGACAACGCAATAATTTTGTACTTGT 59.641 34.615 0.00 0.00 32.34 3.16
3964 4176 6.183359 CCGACAACGCAATAATTTTGTACTTG 60.183 38.462 0.00 0.00 38.29 3.16
3965 4177 5.854338 CCGACAACGCAATAATTTTGTACTT 59.146 36.000 0.00 0.00 38.29 2.24
3966 4178 5.387279 CCGACAACGCAATAATTTTGTACT 58.613 37.500 0.00 0.00 38.29 2.73
3967 4179 4.555747 CCCGACAACGCAATAATTTTGTAC 59.444 41.667 0.00 0.00 38.29 2.90
3968 4180 4.724303 CCCGACAACGCAATAATTTTGTA 58.276 39.130 0.00 0.00 38.29 2.41
3969 4181 3.570559 CCCGACAACGCAATAATTTTGT 58.429 40.909 0.00 0.00 38.29 2.83
3970 4182 2.344142 GCCCGACAACGCAATAATTTTG 59.656 45.455 0.00 0.00 38.29 2.44
3971 4183 2.230266 AGCCCGACAACGCAATAATTTT 59.770 40.909 0.00 0.00 38.29 1.82
3972 4184 1.816224 AGCCCGACAACGCAATAATTT 59.184 42.857 0.00 0.00 38.29 1.82
3973 4185 1.459450 AGCCCGACAACGCAATAATT 58.541 45.000 0.00 0.00 38.29 1.40
3974 4186 1.459450 AAGCCCGACAACGCAATAAT 58.541 45.000 0.00 0.00 38.29 1.28
3975 4187 2.096220 TAAGCCCGACAACGCAATAA 57.904 45.000 0.00 0.00 38.29 1.40
3976 4188 2.096220 TTAAGCCCGACAACGCAATA 57.904 45.000 0.00 0.00 38.29 1.90
3977 4189 1.240256 TTTAAGCCCGACAACGCAAT 58.760 45.000 0.00 0.00 38.29 3.56
3978 4190 1.022735 TTTTAAGCCCGACAACGCAA 58.977 45.000 0.00 0.00 38.29 4.85
3979 4191 1.240256 ATTTTAAGCCCGACAACGCA 58.760 45.000 0.00 0.00 38.29 5.24
3980 4192 2.341318 AATTTTAAGCCCGACAACGC 57.659 45.000 0.00 0.00 38.29 4.84
3981 4193 9.887406 AATATAATAATTTTAAGCCCGACAACG 57.113 29.630 0.00 0.00 39.43 4.10
4031 4243 9.788960 GAAACAAAGAAAACAGAAGTACAGAAT 57.211 29.630 0.00 0.00 0.00 2.40
4032 4244 9.010029 AGAAACAAAGAAAACAGAAGTACAGAA 57.990 29.630 0.00 0.00 0.00 3.02
4033 4245 8.561738 AGAAACAAAGAAAACAGAAGTACAGA 57.438 30.769 0.00 0.00 0.00 3.41
4034 4246 9.626045 AAAGAAACAAAGAAAACAGAAGTACAG 57.374 29.630 0.00 0.00 0.00 2.74
4035 4247 9.974980 AAAAGAAACAAAGAAAACAGAAGTACA 57.025 25.926 0.00 0.00 0.00 2.90
4059 4271 8.874816 CCAAAAGAAACCGATGAAAACTAAAAA 58.125 29.630 0.00 0.00 0.00 1.94
4060 4272 8.035984 ACCAAAAGAAACCGATGAAAACTAAAA 58.964 29.630 0.00 0.00 0.00 1.52
4061 4273 7.548967 ACCAAAAGAAACCGATGAAAACTAAA 58.451 30.769 0.00 0.00 0.00 1.85
4062 4274 7.102847 ACCAAAAGAAACCGATGAAAACTAA 57.897 32.000 0.00 0.00 0.00 2.24
4063 4275 6.702716 ACCAAAAGAAACCGATGAAAACTA 57.297 33.333 0.00 0.00 0.00 2.24
4064 4276 5.592104 ACCAAAAGAAACCGATGAAAACT 57.408 34.783 0.00 0.00 0.00 2.66
4065 4277 6.656314 AAACCAAAAGAAACCGATGAAAAC 57.344 33.333 0.00 0.00 0.00 2.43
4066 4278 7.674471 AAAAACCAAAAGAAACCGATGAAAA 57.326 28.000 0.00 0.00 0.00 2.29
4115 4327 9.083080 TCATGTAGACGAAAAATGTACAGTATG 57.917 33.333 0.33 0.00 46.00 2.39
4116 4328 9.647797 TTCATGTAGACGAAAAATGTACAGTAT 57.352 29.630 0.33 0.00 30.24 2.12
4117 4329 9.478768 TTTCATGTAGACGAAAAATGTACAGTA 57.521 29.630 0.33 0.00 30.24 2.74
4118 4330 7.956420 TTCATGTAGACGAAAAATGTACAGT 57.044 32.000 0.33 0.00 30.24 3.55
4119 4331 9.658475 TTTTTCATGTAGACGAAAAATGTACAG 57.342 29.630 2.82 0.00 42.92 2.74
4120 4332 9.440784 GTTTTTCATGTAGACGAAAAATGTACA 57.559 29.630 9.40 0.00 46.79 2.90
4121 4333 9.440784 TGTTTTTCATGTAGACGAAAAATGTAC 57.559 29.630 9.40 0.00 46.79 2.90
4123 4335 9.528018 AATGTTTTTCATGTAGACGAAAAATGT 57.472 25.926 9.40 0.58 46.79 2.71
4153 4365 9.944663 ATGTATTCAAAATCGTTAAATGCGTAT 57.055 25.926 0.00 0.00 0.00 3.06
4154 4366 9.216087 CATGTATTCAAAATCGTTAAATGCGTA 57.784 29.630 0.00 0.00 0.00 4.42
4155 4367 7.965655 TCATGTATTCAAAATCGTTAAATGCGT 59.034 29.630 0.00 0.00 0.00 5.24
4156 4368 8.321678 TCATGTATTCAAAATCGTTAAATGCG 57.678 30.769 0.00 0.00 0.00 4.73
4163 4375 9.859427 AATGTCAATCATGTATTCAAAATCGTT 57.141 25.926 0.00 0.00 36.81 3.85
4164 4376 9.859427 AAATGTCAATCATGTATTCAAAATCGT 57.141 25.926 0.00 0.00 36.81 3.73
4230 4442 9.911138 TGTTTCTGTATACGAAAATGTACAGTA 57.089 29.630 18.10 0.00 42.10 2.74
4231 4443 8.821147 TGTTTCTGTATACGAAAATGTACAGT 57.179 30.769 18.10 0.00 42.10 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.