Multiple sequence alignment - TraesCS5A01G459500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G459500 chr5A 100.000 2183 0 0 1 2183 640180074 640177892 0.000000e+00 4032.0
1 TraesCS5A01G459500 chr5A 94.655 711 32 5 1 708 500640655 500641362 0.000000e+00 1098.0
2 TraesCS5A01G459500 chr5A 100.000 218 0 0 2479 2696 640177596 640177379 1.160000e-108 403.0
3 TraesCS5A01G459500 chr5A 93.878 147 9 0 734 880 640184547 640184401 3.490000e-54 222.0
4 TraesCS5A01G459500 chr5A 91.837 147 12 0 734 880 94244942 94245088 3.520000e-49 206.0
5 TraesCS5A01G459500 chr5A 91.216 148 13 0 733 880 94249911 94250058 4.550000e-48 202.0
6 TraesCS5A01G459500 chr5B 87.586 1313 130 19 866 2166 642879680 642878389 0.000000e+00 1491.0
7 TraesCS5A01G459500 chr5D 92.949 851 35 7 868 1698 511907295 511906450 0.000000e+00 1216.0
8 TraesCS5A01G459500 chr5D 82.627 472 59 12 1708 2166 511892341 511891880 1.950000e-106 396.0
9 TraesCS5A01G459500 chr5D 82.796 93 15 1 2079 2170 190502164 190502072 6.190000e-12 82.4
10 TraesCS5A01G459500 chr5D 91.304 46 4 0 2507 2552 457563876 457563921 2.240000e-06 63.9
11 TraesCS5A01G459500 chr5D 89.796 49 4 1 2487 2534 445066073 445066025 8.060000e-06 62.1
12 TraesCS5A01G459500 chr5D 84.906 53 8 0 2482 2534 233003307 233003255 1.000000e-03 54.7
13 TraesCS5A01G459500 chr1A 94.930 710 32 4 1 708 520732119 520732826 0.000000e+00 1109.0
14 TraesCS5A01G459500 chr1A 94.930 710 30 4 1 705 536029226 536028518 0.000000e+00 1107.0
15 TraesCS5A01G459500 chr2A 94.583 720 31 6 1 713 622353816 622353098 0.000000e+00 1107.0
16 TraesCS5A01G459500 chr2A 94.568 718 32 7 1 713 141659201 141659916 0.000000e+00 1103.0
17 TraesCS5A01G459500 chr2A 94.908 707 32 4 1 704 497593095 497592390 0.000000e+00 1103.0
18 TraesCS5A01G459500 chr2A 94.421 717 33 6 1 713 111997989 111997276 0.000000e+00 1096.0
19 TraesCS5A01G459500 chr2A 94.290 718 35 6 1 713 45223539 45222823 0.000000e+00 1094.0
20 TraesCS5A01G459500 chr2A 88.462 52 4 2 2484 2534 4844460 4844510 8.060000e-06 62.1
21 TraesCS5A01G459500 chr3A 94.901 706 31 5 2 704 55893246 55892543 0.000000e+00 1099.0
22 TraesCS5A01G459500 chr7A 94.771 153 8 0 733 885 474564510 474564358 3.470000e-59 239.0
23 TraesCS5A01G459500 chr6A 94.595 148 8 0 733 880 226075663 226075810 2.090000e-56 230.0
24 TraesCS5A01G459500 chr4D 95.714 140 6 0 739 878 65847510 65847649 2.700000e-55 226.0
25 TraesCS5A01G459500 chr4D 94.366 142 8 0 739 880 2103494 2103353 4.520000e-53 219.0
26 TraesCS5A01G459500 chr2D 93.919 148 9 0 733 880 406151944 406152091 9.710000e-55 224.0
27 TraesCS5A01G459500 chr2D 95.070 142 7 0 739 880 597956963 597957104 9.710000e-55 224.0
28 TraesCS5A01G459500 chr7D 83.333 108 18 0 2498 2605 528629527 528629420 1.710000e-17 100.0
29 TraesCS5A01G459500 chr7D 100.000 28 0 0 2507 2534 531112979 531113006 5.000000e-03 52.8
30 TraesCS5A01G459500 chr4A 82.353 102 12 5 2506 2604 192779377 192779279 1.720000e-12 84.2
31 TraesCS5A01G459500 chr2B 84.615 78 10 2 2482 2558 263079075 263078999 2.880000e-10 76.8
32 TraesCS5A01G459500 chr2B 88.000 50 3 3 2487 2534 648681440 648681488 3.750000e-04 56.5
33 TraesCS5A01G459500 chr3D 88.679 53 6 0 2482 2534 477023796 477023744 6.230000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G459500 chr5A 640177379 640180074 2695 True 2217.5 4032 100.000 1 2696 2 chr5A.!!$R2 2695
1 TraesCS5A01G459500 chr5A 500640655 500641362 707 False 1098.0 1098 94.655 1 708 1 chr5A.!!$F3 707
2 TraesCS5A01G459500 chr5B 642878389 642879680 1291 True 1491.0 1491 87.586 866 2166 1 chr5B.!!$R1 1300
3 TraesCS5A01G459500 chr5D 511906450 511907295 845 True 1216.0 1216 92.949 868 1698 1 chr5D.!!$R5 830
4 TraesCS5A01G459500 chr1A 520732119 520732826 707 False 1109.0 1109 94.930 1 708 1 chr1A.!!$F1 707
5 TraesCS5A01G459500 chr1A 536028518 536029226 708 True 1107.0 1107 94.930 1 705 1 chr1A.!!$R1 704
6 TraesCS5A01G459500 chr2A 622353098 622353816 718 True 1107.0 1107 94.583 1 713 1 chr2A.!!$R4 712
7 TraesCS5A01G459500 chr2A 141659201 141659916 715 False 1103.0 1103 94.568 1 713 1 chr2A.!!$F2 712
8 TraesCS5A01G459500 chr2A 497592390 497593095 705 True 1103.0 1103 94.908 1 704 1 chr2A.!!$R3 703
9 TraesCS5A01G459500 chr2A 111997276 111997989 713 True 1096.0 1096 94.421 1 713 1 chr2A.!!$R2 712
10 TraesCS5A01G459500 chr2A 45222823 45223539 716 True 1094.0 1094 94.290 1 713 1 chr2A.!!$R1 712
11 TraesCS5A01G459500 chr3A 55892543 55893246 703 True 1099.0 1099 94.901 2 704 1 chr3A.!!$R1 702

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
468 476 0.106268 TGGGTGTGCATCCAACTTGT 60.106 50.0 1.0 0.0 38.97 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2097 2144 0.179129 CGCACTTTCCATCCAATGCC 60.179 55.0 0.0 0.0 0.0 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 6.928492 GTCTTCTCAAAATAACATGGCCAAAA 59.072 34.615 10.96 0.00 0.00 2.44
164 165 2.484742 TGCTCTCATCATGCACAACT 57.515 45.000 0.00 0.00 0.00 3.16
248 249 4.452114 GCAATATATGAGCGTGAACCATGA 59.548 41.667 0.00 0.00 0.00 3.07
311 316 6.264518 GGTTATGTGGAGAAGACAAAAAGGAA 59.735 38.462 0.00 0.00 0.00 3.36
391 396 5.193679 GTTAATGCAAGGAGTAGGGATTGT 58.806 41.667 0.00 0.00 0.00 2.71
421 426 6.835819 ACGGATGCACTAGAGCTATAAATA 57.164 37.500 13.47 0.00 34.99 1.40
468 476 0.106268 TGGGTGTGCATCCAACTTGT 60.106 50.000 1.00 0.00 38.97 3.16
511 519 0.776810 TTGAGGAGGCCCATTGTTGA 59.223 50.000 0.00 0.00 33.88 3.18
603 611 5.109210 TCTAACATGAAGATTACGGTGCTG 58.891 41.667 0.00 0.00 0.00 4.41
725 741 7.894753 TTTTATTCCTCATATTGGATGTGCA 57.105 32.000 0.00 0.00 33.09 4.57
726 742 6.882610 TTATTCCTCATATTGGATGTGCAC 57.117 37.500 10.75 10.75 33.09 4.57
727 743 2.837498 TCCTCATATTGGATGTGCACG 58.163 47.619 13.13 0.00 0.00 5.34
728 744 1.875514 CCTCATATTGGATGTGCACGG 59.124 52.381 13.13 0.00 0.00 4.94
729 745 2.564771 CTCATATTGGATGTGCACGGT 58.435 47.619 13.13 2.88 0.00 4.83
730 746 3.494223 CCTCATATTGGATGTGCACGGTA 60.494 47.826 13.13 0.00 0.00 4.02
731 747 4.318332 CTCATATTGGATGTGCACGGTAT 58.682 43.478 13.13 0.00 0.00 2.73
732 748 5.476091 TCATATTGGATGTGCACGGTATA 57.524 39.130 13.13 5.96 0.00 1.47
733 749 6.048732 TCATATTGGATGTGCACGGTATAT 57.951 37.500 13.13 7.92 0.00 0.86
734 750 7.176589 TCATATTGGATGTGCACGGTATATA 57.823 36.000 13.13 7.68 0.00 0.86
735 751 7.791029 TCATATTGGATGTGCACGGTATATAT 58.209 34.615 13.13 9.56 0.00 0.86
736 752 8.264347 TCATATTGGATGTGCACGGTATATATT 58.736 33.333 13.13 0.00 0.00 1.28
737 753 6.741992 ATTGGATGTGCACGGTATATATTG 57.258 37.500 13.13 0.00 0.00 1.90
738 754 4.574892 TGGATGTGCACGGTATATATTGG 58.425 43.478 13.13 0.00 0.00 3.16
739 755 4.284746 TGGATGTGCACGGTATATATTGGA 59.715 41.667 13.13 0.00 0.00 3.53
740 756 5.045942 TGGATGTGCACGGTATATATTGGAT 60.046 40.000 13.13 0.00 0.00 3.41
741 757 5.294306 GGATGTGCACGGTATATATTGGATG 59.706 44.000 13.13 0.00 0.00 3.51
742 758 5.222079 TGTGCACGGTATATATTGGATGT 57.778 39.130 13.13 0.00 0.00 3.06
743 759 6.347859 TGTGCACGGTATATATTGGATGTA 57.652 37.500 13.13 0.00 0.00 2.29
744 760 6.941857 TGTGCACGGTATATATTGGATGTAT 58.058 36.000 13.13 0.00 0.00 2.29
745 761 6.816140 TGTGCACGGTATATATTGGATGTATG 59.184 38.462 13.13 0.00 0.00 2.39
746 762 7.039270 GTGCACGGTATATATTGGATGTATGA 58.961 38.462 0.00 0.00 0.00 2.15
747 763 7.547722 GTGCACGGTATATATTGGATGTATGAA 59.452 37.037 0.00 0.00 0.00 2.57
748 764 8.264347 TGCACGGTATATATTGGATGTATGAAT 58.736 33.333 0.00 0.00 0.00 2.57
749 765 9.109393 GCACGGTATATATTGGATGTATGAATT 57.891 33.333 0.00 0.00 0.00 2.17
751 767 9.109393 ACGGTATATATTGGATGTATGAATTGC 57.891 33.333 0.00 0.00 0.00 3.56
752 768 9.108284 CGGTATATATTGGATGTATGAATTGCA 57.892 33.333 0.00 0.00 0.00 4.08
754 770 9.920826 GTATATATTGGATGTATGAATTGCACG 57.079 33.333 0.00 0.00 0.00 5.34
755 771 8.791327 ATATATTGGATGTATGAATTGCACGA 57.209 30.769 0.00 0.00 0.00 4.35
756 772 7.692460 ATATTGGATGTATGAATTGCACGAT 57.308 32.000 0.00 0.00 0.00 3.73
757 773 4.816786 TGGATGTATGAATTGCACGATG 57.183 40.909 0.00 0.00 0.00 3.84
758 774 4.198530 TGGATGTATGAATTGCACGATGT 58.801 39.130 0.00 0.00 0.00 3.06
759 775 5.363939 TGGATGTATGAATTGCACGATGTA 58.636 37.500 0.00 0.00 0.00 2.29
760 776 5.997129 TGGATGTATGAATTGCACGATGTAT 59.003 36.000 0.00 0.00 0.00 2.29
761 777 6.486320 TGGATGTATGAATTGCACGATGTATT 59.514 34.615 0.00 0.00 0.00 1.89
762 778 6.798476 GGATGTATGAATTGCACGATGTATTG 59.202 38.462 0.00 0.00 0.00 1.90
763 779 6.917217 TGTATGAATTGCACGATGTATTGA 57.083 33.333 0.00 0.00 0.00 2.57
764 780 7.495135 TGTATGAATTGCACGATGTATTGAT 57.505 32.000 0.00 0.00 0.00 2.57
765 781 7.929159 TGTATGAATTGCACGATGTATTGATT 58.071 30.769 0.00 0.00 0.00 2.57
766 782 8.069574 TGTATGAATTGCACGATGTATTGATTC 58.930 33.333 0.00 0.00 0.00 2.52
767 783 5.500825 TGAATTGCACGATGTATTGATTCG 58.499 37.500 0.00 0.00 38.76 3.34
768 784 3.942539 TTGCACGATGTATTGATTCGG 57.057 42.857 0.00 0.00 37.20 4.30
769 785 2.899976 TGCACGATGTATTGATTCGGT 58.100 42.857 0.00 0.00 37.20 4.69
770 786 2.607180 TGCACGATGTATTGATTCGGTG 59.393 45.455 0.00 0.00 37.20 4.94
771 787 2.599848 GCACGATGTATTGATTCGGTGC 60.600 50.000 0.00 0.00 37.20 5.01
772 788 2.607180 CACGATGTATTGATTCGGTGCA 59.393 45.455 0.00 0.00 37.20 4.57
773 789 3.063316 CACGATGTATTGATTCGGTGCAA 59.937 43.478 0.00 0.00 37.20 4.08
774 790 3.876914 ACGATGTATTGATTCGGTGCAAT 59.123 39.130 0.00 0.00 37.20 3.56
775 791 4.213674 CGATGTATTGATTCGGTGCAATG 58.786 43.478 0.00 0.00 36.27 2.82
776 792 4.260743 CGATGTATTGATTCGGTGCAATGT 60.261 41.667 0.00 0.00 36.27 2.71
777 793 4.354071 TGTATTGATTCGGTGCAATGTG 57.646 40.909 0.00 0.00 36.27 3.21
778 794 2.282701 ATTGATTCGGTGCAATGTGC 57.717 45.000 0.00 0.00 45.29 4.57
793 809 6.721571 GCAATGTGCACGGTATATATAAGT 57.278 37.500 13.13 0.00 44.26 2.24
794 810 7.821595 GCAATGTGCACGGTATATATAAGTA 57.178 36.000 13.13 0.00 44.26 2.24
795 811 8.420374 GCAATGTGCACGGTATATATAAGTAT 57.580 34.615 13.13 0.00 44.26 2.12
796 812 9.524106 GCAATGTGCACGGTATATATAAGTATA 57.476 33.333 13.13 0.00 44.26 1.47
800 816 9.246670 TGTGCACGGTATATATAAGTATAAGGT 57.753 33.333 13.13 0.00 0.00 3.50
801 817 9.512435 GTGCACGGTATATATAAGTATAAGGTG 57.488 37.037 0.00 0.00 31.67 4.00
802 818 9.465199 TGCACGGTATATATAAGTATAAGGTGA 57.535 33.333 0.00 0.00 30.91 4.02
803 819 9.947669 GCACGGTATATATAAGTATAAGGTGAG 57.052 37.037 0.00 0.00 30.91 3.51
805 821 9.129532 ACGGTATATATAAGTATAAGGTGAGGC 57.870 37.037 0.00 0.00 0.00 4.70
806 822 9.128404 CGGTATATATAAGTATAAGGTGAGGCA 57.872 37.037 0.00 0.00 0.00 4.75
812 828 5.810080 AAGTATAAGGTGAGGCATCTACC 57.190 43.478 10.71 10.71 34.68 3.18
813 829 5.081315 AGTATAAGGTGAGGCATCTACCT 57.919 43.478 14.21 14.21 46.38 3.08
826 842 6.998802 AGGCATCTACCTCAATCTATACAAC 58.001 40.000 0.00 0.00 33.62 3.32
827 843 6.554982 AGGCATCTACCTCAATCTATACAACA 59.445 38.462 0.00 0.00 33.62 3.33
828 844 7.071196 AGGCATCTACCTCAATCTATACAACAA 59.929 37.037 0.00 0.00 33.62 2.83
829 845 7.715249 GGCATCTACCTCAATCTATACAACAAA 59.285 37.037 0.00 0.00 0.00 2.83
830 846 8.552034 GCATCTACCTCAATCTATACAACAAAC 58.448 37.037 0.00 0.00 0.00 2.93
831 847 9.823647 CATCTACCTCAATCTATACAACAAACT 57.176 33.333 0.00 0.00 0.00 2.66
843 859 8.780249 TCTATACAACAAACTAAAAAGGTGAGC 58.220 33.333 0.00 0.00 0.00 4.26
844 860 5.006153 ACAACAAACTAAAAAGGTGAGCC 57.994 39.130 0.00 0.00 0.00 4.70
846 862 5.889289 ACAACAAACTAAAAAGGTGAGCCTA 59.111 36.000 0.00 0.00 46.33 3.93
847 863 6.039382 ACAACAAACTAAAAAGGTGAGCCTAG 59.961 38.462 0.00 0.00 46.33 3.02
848 864 5.691896 ACAAACTAAAAAGGTGAGCCTAGT 58.308 37.500 0.00 0.00 46.33 2.57
849 865 5.763698 ACAAACTAAAAAGGTGAGCCTAGTC 59.236 40.000 0.00 0.00 46.33 2.59
850 866 5.562298 AACTAAAAAGGTGAGCCTAGTCA 57.438 39.130 0.00 0.00 46.33 3.41
851 867 5.562298 ACTAAAAAGGTGAGCCTAGTCAA 57.438 39.130 0.00 0.00 46.33 3.18
852 868 6.128138 ACTAAAAAGGTGAGCCTAGTCAAT 57.872 37.500 0.00 0.00 46.33 2.57
853 869 5.940470 ACTAAAAAGGTGAGCCTAGTCAATG 59.060 40.000 0.00 0.00 46.33 2.82
854 870 4.373156 AAAAGGTGAGCCTAGTCAATGT 57.627 40.909 0.00 0.00 46.33 2.71
855 871 5.499004 AAAAGGTGAGCCTAGTCAATGTA 57.501 39.130 0.00 0.00 46.33 2.29
856 872 4.473477 AAGGTGAGCCTAGTCAATGTAC 57.527 45.455 0.00 0.00 46.33 2.90
857 873 3.441101 AGGTGAGCCTAGTCAATGTACA 58.559 45.455 0.00 0.00 44.90 2.90
858 874 4.033709 AGGTGAGCCTAGTCAATGTACAT 58.966 43.478 1.41 1.41 44.90 2.29
859 875 4.122776 GGTGAGCCTAGTCAATGTACATG 58.877 47.826 9.63 4.13 0.00 3.21
860 876 3.557595 GTGAGCCTAGTCAATGTACATGC 59.442 47.826 9.63 6.55 0.00 4.06
861 877 3.197549 TGAGCCTAGTCAATGTACATGCA 59.802 43.478 9.63 0.00 0.00 3.96
862 878 3.535561 AGCCTAGTCAATGTACATGCAC 58.464 45.455 9.63 9.08 0.00 4.57
863 879 3.055167 AGCCTAGTCAATGTACATGCACA 60.055 43.478 9.63 0.15 0.00 4.57
864 880 3.310774 GCCTAGTCAATGTACATGCACAG 59.689 47.826 9.63 8.82 0.00 3.66
865 881 4.758688 CCTAGTCAATGTACATGCACAGA 58.241 43.478 9.63 0.45 0.00 3.41
866 882 5.363101 CCTAGTCAATGTACATGCACAGAT 58.637 41.667 9.63 0.00 0.00 2.90
867 883 6.515832 CCTAGTCAATGTACATGCACAGATA 58.484 40.000 9.63 0.00 0.00 1.98
868 884 6.986231 CCTAGTCAATGTACATGCACAGATAA 59.014 38.462 9.63 0.00 0.00 1.75
869 885 6.668541 AGTCAATGTACATGCACAGATAAC 57.331 37.500 9.63 1.07 0.00 1.89
870 886 6.172630 AGTCAATGTACATGCACAGATAACA 58.827 36.000 9.63 0.00 0.00 2.41
871 887 6.825213 AGTCAATGTACATGCACAGATAACAT 59.175 34.615 9.63 0.00 0.00 2.71
872 888 7.986889 AGTCAATGTACATGCACAGATAACATA 59.013 33.333 9.63 0.00 0.00 2.29
873 889 8.064222 GTCAATGTACATGCACAGATAACATAC 58.936 37.037 9.63 0.00 0.00 2.39
874 890 7.986889 TCAATGTACATGCACAGATAACATACT 59.013 33.333 9.63 0.00 0.00 2.12
875 891 7.953158 ATGTACATGCACAGATAACATACTC 57.047 36.000 7.78 0.00 0.00 2.59
876 892 6.872920 TGTACATGCACAGATAACATACTCA 58.127 36.000 0.00 0.00 0.00 3.41
877 893 7.327214 TGTACATGCACAGATAACATACTCAA 58.673 34.615 0.00 0.00 0.00 3.02
878 894 6.668541 ACATGCACAGATAACATACTCAAC 57.331 37.500 0.00 0.00 0.00 3.18
879 895 6.172630 ACATGCACAGATAACATACTCAACA 58.827 36.000 0.00 0.00 0.00 3.33
986 1015 1.151777 ATATCGTTGCTTCCACGCCG 61.152 55.000 0.00 0.00 0.00 6.46
987 1016 2.215465 TATCGTTGCTTCCACGCCGA 62.215 55.000 0.00 0.00 0.00 5.54
988 1017 3.342627 CGTTGCTTCCACGCCGAA 61.343 61.111 0.00 0.00 0.00 4.30
1110 1139 2.111878 GCCATGTCCTAGCGCCAT 59.888 61.111 2.29 0.00 0.00 4.40
1128 1157 3.733960 CGACGTCGTGGCTCTCCA 61.734 66.667 29.08 0.00 40.85 3.86
1426 1455 1.311859 ACGTGTGTCTTGACCGAGTA 58.688 50.000 0.00 0.00 0.00 2.59
1504 1541 0.038343 GGGTGTACGGCGAACAACTA 60.038 55.000 16.62 0.00 34.86 2.24
1581 1618 3.552384 TGTTGAAGACCGCCCCGT 61.552 61.111 0.00 0.00 0.00 5.28
1631 1668 0.882474 CTTCGAGTCCGTGTTCCTCT 59.118 55.000 0.00 0.00 37.05 3.69
1634 1671 0.388649 CGAGTCCGTGTTCCTCTTGG 60.389 60.000 0.00 0.00 0.00 3.61
1640 1677 2.281484 TGTTCCTCTTGGCGTGGC 60.281 61.111 0.00 0.00 0.00 5.01
1676 1714 1.065600 GCCTGCAAACTTCGCACAA 59.934 52.632 0.00 0.00 35.08 3.33
1694 1735 8.667987 TCGCACAATTTAAGTGATTGAAATAC 57.332 30.769 0.00 0.00 39.30 1.89
1723 1764 4.457834 CAAACTGGGTGTGTTTGGTTTA 57.542 40.909 10.41 0.00 45.98 2.01
1724 1765 4.822026 CAAACTGGGTGTGTTTGGTTTAA 58.178 39.130 10.41 0.00 45.98 1.52
1725 1766 5.423886 CAAACTGGGTGTGTTTGGTTTAAT 58.576 37.500 10.41 0.00 45.98 1.40
1726 1767 6.574350 CAAACTGGGTGTGTTTGGTTTAATA 58.426 36.000 10.41 0.00 45.98 0.98
1733 1774 6.041182 GGGTGTGTTTGGTTTAATAAGGTTCT 59.959 38.462 0.00 0.00 0.00 3.01
1779 1826 9.559732 TGGTATATAACTGTCTTTGAATCATGG 57.440 33.333 0.00 0.00 0.00 3.66
1783 1830 3.499338 ACTGTCTTTGAATCATGGCCAA 58.501 40.909 10.96 0.00 0.00 4.52
1784 1831 3.508793 ACTGTCTTTGAATCATGGCCAAG 59.491 43.478 10.96 5.19 0.00 3.61
1785 1832 3.499338 TGTCTTTGAATCATGGCCAAGT 58.501 40.909 10.96 0.00 0.00 3.16
1786 1833 3.256383 TGTCTTTGAATCATGGCCAAGTG 59.744 43.478 10.96 4.28 0.00 3.16
1788 1835 3.896888 TCTTTGAATCATGGCCAAGTGTT 59.103 39.130 10.96 5.20 0.00 3.32
1789 1836 3.663995 TTGAATCATGGCCAAGTGTTG 57.336 42.857 10.96 2.38 0.00 3.33
1790 1837 2.874014 TGAATCATGGCCAAGTGTTGA 58.126 42.857 10.96 9.40 0.00 3.18
1805 1852 5.031066 AGTGTTGAGTACCTGCTAAAACA 57.969 39.130 0.00 0.00 0.00 2.83
1845 1892 9.645059 TTGTCTATTTCTGTATTGAGAACTCAG 57.355 33.333 4.72 0.00 41.13 3.35
1858 1905 6.048732 TGAGAACTCAGTGCCATGTATTTA 57.951 37.500 0.00 0.00 34.14 1.40
1864 1911 6.291377 ACTCAGTGCCATGTATTTATAGTGG 58.709 40.000 0.00 0.00 0.00 4.00
1868 1915 8.268605 TCAGTGCCATGTATTTATAGTGGTAAA 58.731 33.333 0.00 0.00 32.56 2.01
1869 1916 8.342634 CAGTGCCATGTATTTATAGTGGTAAAC 58.657 37.037 0.00 0.00 32.56 2.01
1870 1917 7.225931 AGTGCCATGTATTTATAGTGGTAAACG 59.774 37.037 0.00 0.00 32.56 3.60
1945 1992 1.257743 GCATCCCTATACGCTGAGGA 58.742 55.000 0.00 0.00 34.46 3.71
1948 1995 3.067461 GCATCCCTATACGCTGAGGATAG 59.933 52.174 3.85 3.85 42.31 2.08
1955 2002 0.687757 ACGCTGAGGATAGGCTTGGA 60.688 55.000 0.00 0.00 0.00 3.53
1963 2010 4.289672 TGAGGATAGGCTTGGAGAAAAGTT 59.710 41.667 0.00 0.00 0.00 2.66
1969 2016 7.122799 GGATAGGCTTGGAGAAAAGTTGTTTAT 59.877 37.037 0.00 0.00 0.00 1.40
2030 2077 2.280797 GTCAGCACCGCCTTCACA 60.281 61.111 0.00 0.00 0.00 3.58
2033 2080 1.376424 CAGCACCGCCTTCACATCT 60.376 57.895 0.00 0.00 0.00 2.90
2038 2085 1.296392 CCGCCTTCACATCTGGTCA 59.704 57.895 0.00 0.00 0.00 4.02
2042 2089 1.067142 GCCTTCACATCTGGTCACGTA 60.067 52.381 0.00 0.00 0.00 3.57
2048 2095 1.893137 ACATCTGGTCACGTAGCTCAA 59.107 47.619 0.00 0.00 0.00 3.02
2054 2101 2.036604 TGGTCACGTAGCTCAACATCAA 59.963 45.455 0.00 0.00 0.00 2.57
2057 2104 3.679980 GTCACGTAGCTCAACATCAATGT 59.320 43.478 0.00 0.00 44.20 2.71
2058 2105 3.926527 TCACGTAGCTCAACATCAATGTC 59.073 43.478 0.00 0.00 40.80 3.06
2059 2106 3.679502 CACGTAGCTCAACATCAATGTCA 59.320 43.478 0.00 0.00 40.80 3.58
2062 2109 2.089980 AGCTCAACATCAATGTCAGCC 58.910 47.619 17.27 6.16 42.89 4.85
2064 2111 0.804364 TCAACATCAATGTCAGCCGC 59.196 50.000 0.00 0.00 40.80 6.53
2090 2137 0.108041 CCCTTGGCCAACATGAATGC 60.108 55.000 16.05 0.00 0.00 3.56
2094 2141 2.580326 GCCAACATGAATGCGGCG 60.580 61.111 0.51 0.51 39.09 6.46
2097 2144 4.178214 AACATGAATGCGGCGCGG 62.178 61.111 28.09 11.08 0.00 6.46
2113 2160 1.322538 GCGGGCATTGGATGGAAAGT 61.323 55.000 0.00 0.00 0.00 2.66
2114 2161 0.457035 CGGGCATTGGATGGAAAGTG 59.543 55.000 0.00 0.00 0.00 3.16
2115 2162 0.176449 GGGCATTGGATGGAAAGTGC 59.824 55.000 0.00 0.00 0.00 4.40
2133 2180 4.779733 GGGAGAGGCGGGTGAGGA 62.780 72.222 0.00 0.00 0.00 3.71
2146 2193 1.970640 GGTGAGGAATTTTTGTGGGCT 59.029 47.619 0.00 0.00 0.00 5.19
2151 2198 2.111792 AGGAATTTTTGTGGGCTAGGGT 59.888 45.455 0.00 0.00 0.00 4.34
2157 2204 0.844661 TTGTGGGCTAGGGTGGTCAT 60.845 55.000 0.00 0.00 0.00 3.06
2160 2207 1.046472 TGGGCTAGGGTGGTCATACG 61.046 60.000 0.00 0.00 0.00 3.06
2166 2213 4.157120 GGTGGTCATACGCGGGCT 62.157 66.667 12.47 0.00 0.00 5.19
2167 2214 2.125269 GTGGTCATACGCGGGCTT 60.125 61.111 12.47 0.00 0.00 4.35
2168 2215 2.125310 TGGTCATACGCGGGCTTG 60.125 61.111 12.47 1.97 0.00 4.01
2169 2216 2.895372 GGTCATACGCGGGCTTGG 60.895 66.667 12.47 0.00 0.00 3.61
2170 2217 3.573491 GTCATACGCGGGCTTGGC 61.573 66.667 12.47 0.00 0.00 4.52
2171 2218 4.089239 TCATACGCGGGCTTGGCA 62.089 61.111 12.47 0.00 0.00 4.92
2172 2219 3.130819 CATACGCGGGCTTGGCAA 61.131 61.111 12.47 0.00 0.00 4.52
2173 2220 3.131478 ATACGCGGGCTTGGCAAC 61.131 61.111 12.47 0.00 0.00 4.17
2177 2224 4.179579 GCGGGCTTGGCAACGATC 62.180 66.667 12.21 0.00 42.51 3.69
2178 2225 2.436646 CGGGCTTGGCAACGATCT 60.437 61.111 0.00 0.00 42.51 2.75
2179 2226 1.153449 CGGGCTTGGCAACGATCTA 60.153 57.895 0.00 0.00 42.51 1.98
2180 2227 1.154205 CGGGCTTGGCAACGATCTAG 61.154 60.000 0.00 0.00 42.51 2.43
2181 2228 0.178068 GGGCTTGGCAACGATCTAGA 59.822 55.000 0.00 0.00 42.51 2.43
2182 2229 1.291132 GGCTTGGCAACGATCTAGAC 58.709 55.000 0.00 0.00 42.51 2.59
2502 2549 3.857638 AAAAATGCGTTCGGACCAC 57.142 47.368 0.00 0.00 0.00 4.16
2503 2550 0.312729 AAAAATGCGTTCGGACCACC 59.687 50.000 0.00 0.00 0.00 4.61
2504 2551 1.520600 AAAATGCGTTCGGACCACCC 61.521 55.000 0.00 0.00 0.00 4.61
2505 2552 2.684192 AAATGCGTTCGGACCACCCA 62.684 55.000 0.00 0.00 34.14 4.51
2506 2553 3.605749 ATGCGTTCGGACCACCCAG 62.606 63.158 0.00 0.00 34.14 4.45
2516 2563 3.151710 CCACCCAGCGGACCGATA 61.152 66.667 20.50 0.00 0.00 2.92
2517 2564 2.106332 CACCCAGCGGACCGATAC 59.894 66.667 20.50 0.00 0.00 2.24
2518 2565 2.363276 ACCCAGCGGACCGATACA 60.363 61.111 20.50 0.00 0.00 2.29
2519 2566 2.417516 CCCAGCGGACCGATACAG 59.582 66.667 20.50 3.32 0.00 2.74
2520 2567 2.417516 CCAGCGGACCGATACAGG 59.582 66.667 20.50 5.15 37.30 4.00
2521 2568 2.279517 CAGCGGACCGATACAGGC 60.280 66.667 20.50 0.00 33.69 4.85
2522 2569 3.537874 AGCGGACCGATACAGGCC 61.538 66.667 20.50 0.00 33.69 5.19
2523 2570 4.603946 GCGGACCGATACAGGCCC 62.604 72.222 20.50 0.00 33.69 5.80
2525 2572 4.603946 GGACCGATACAGGCCCGC 62.604 72.222 0.00 0.00 33.69 6.13
2526 2573 3.845259 GACCGATACAGGCCCGCA 61.845 66.667 0.00 0.00 33.69 5.69
2527 2574 3.161450 ACCGATACAGGCCCGCAT 61.161 61.111 0.00 0.00 33.69 4.73
2528 2575 2.111043 CCGATACAGGCCCGCATT 59.889 61.111 0.00 0.00 0.00 3.56
2529 2576 2.253758 CCGATACAGGCCCGCATTG 61.254 63.158 0.00 0.00 0.00 2.82
2530 2577 2.253758 CGATACAGGCCCGCATTGG 61.254 63.158 0.00 0.00 37.55 3.16
2531 2578 1.148273 GATACAGGCCCGCATTGGA 59.852 57.895 0.00 0.00 42.00 3.53
2532 2579 0.250901 GATACAGGCCCGCATTGGAT 60.251 55.000 0.00 0.00 42.00 3.41
2533 2580 0.538057 ATACAGGCCCGCATTGGATG 60.538 55.000 0.00 0.00 42.00 3.51
2534 2581 1.920734 TACAGGCCCGCATTGGATGT 61.921 55.000 0.00 0.00 42.00 3.06
2535 2582 2.124151 AGGCCCGCATTGGATGTC 60.124 61.111 0.00 0.00 42.00 3.06
2536 2583 2.440065 GGCCCGCATTGGATGTCA 60.440 61.111 0.00 0.00 42.00 3.58
2537 2584 2.774799 GGCCCGCATTGGATGTCAC 61.775 63.158 0.00 0.00 42.00 3.67
2538 2585 2.045708 GCCCGCATTGGATGTCACA 61.046 57.895 0.00 0.00 42.00 3.58
2539 2586 1.594194 GCCCGCATTGGATGTCACAA 61.594 55.000 0.00 0.00 42.00 3.33
2540 2587 0.171007 CCCGCATTGGATGTCACAAC 59.829 55.000 0.00 0.00 42.00 3.32
2541 2588 0.880441 CCGCATTGGATGTCACAACA 59.120 50.000 0.00 0.00 42.00 3.33
2543 2590 2.521996 CGCATTGGATGTCACAACATG 58.478 47.619 0.00 0.00 46.20 3.21
2544 2591 2.095110 CGCATTGGATGTCACAACATGT 60.095 45.455 0.00 0.00 46.20 3.21
2545 2592 3.612241 CGCATTGGATGTCACAACATGTT 60.612 43.478 4.92 4.92 46.20 2.71
2546 2593 4.309099 GCATTGGATGTCACAACATGTTT 58.691 39.130 8.77 0.00 46.20 2.83
2547 2594 4.150980 GCATTGGATGTCACAACATGTTTG 59.849 41.667 8.77 10.85 46.20 2.93
2548 2595 4.319139 TTGGATGTCACAACATGTTTGG 57.681 40.909 8.77 4.06 46.20 3.28
2549 2596 3.560105 TGGATGTCACAACATGTTTGGA 58.440 40.909 8.77 6.60 46.20 3.53
2550 2597 3.317711 TGGATGTCACAACATGTTTGGAC 59.682 43.478 23.21 23.21 46.20 4.02
2551 2598 3.305335 GGATGTCACAACATGTTTGGACC 60.305 47.826 25.35 16.13 46.20 4.46
2552 2599 1.673400 TGTCACAACATGTTTGGACCG 59.327 47.619 25.35 11.69 0.00 4.79
2553 2600 1.673920 GTCACAACATGTTTGGACCGT 59.326 47.619 20.94 9.00 0.00 4.83
2554 2601 1.673400 TCACAACATGTTTGGACCGTG 59.327 47.619 8.77 12.68 0.00 4.94
2555 2602 0.383949 ACAACATGTTTGGACCGTGC 59.616 50.000 8.77 0.00 0.00 5.34
2556 2603 0.660005 CAACATGTTTGGACCGTGCG 60.660 55.000 8.77 0.00 0.00 5.34
2557 2604 0.816018 AACATGTTTGGACCGTGCGA 60.816 50.000 4.92 0.00 0.00 5.10
2558 2605 0.605319 ACATGTTTGGACCGTGCGAT 60.605 50.000 0.00 0.00 0.00 4.58
2559 2606 1.338294 ACATGTTTGGACCGTGCGATA 60.338 47.619 0.00 0.00 0.00 2.92
2560 2607 1.939934 CATGTTTGGACCGTGCGATAT 59.060 47.619 0.00 0.00 0.00 1.63
2561 2608 2.963548 TGTTTGGACCGTGCGATATA 57.036 45.000 0.00 0.00 0.00 0.86
2562 2609 2.816689 TGTTTGGACCGTGCGATATAG 58.183 47.619 0.00 0.00 0.00 1.31
2563 2610 2.427812 TGTTTGGACCGTGCGATATAGA 59.572 45.455 0.00 0.00 0.00 1.98
2564 2611 2.787601 TTGGACCGTGCGATATAGAC 57.212 50.000 0.00 0.00 0.00 2.59
2565 2612 0.589708 TGGACCGTGCGATATAGACG 59.410 55.000 0.00 0.00 0.00 4.18
2566 2613 0.590195 GGACCGTGCGATATAGACGT 59.410 55.000 0.00 0.00 0.00 4.34
2567 2614 1.800586 GGACCGTGCGATATAGACGTA 59.199 52.381 0.00 0.00 0.00 3.57
2568 2615 2.417933 GGACCGTGCGATATAGACGTAT 59.582 50.000 0.00 0.00 0.00 3.06
2569 2616 3.414464 GACCGTGCGATATAGACGTATG 58.586 50.000 0.00 0.00 33.58 2.39
2570 2617 2.174764 CCGTGCGATATAGACGTATGC 58.825 52.381 0.00 0.00 32.76 3.14
2571 2618 1.832402 CGTGCGATATAGACGTATGCG 59.168 52.381 0.19 0.19 44.93 4.73
2572 2619 2.174764 GTGCGATATAGACGTATGCGG 58.825 52.381 8.39 0.00 43.45 5.69
2573 2620 1.131693 TGCGATATAGACGTATGCGGG 59.868 52.381 8.39 0.00 43.45 6.13
2574 2621 1.131883 GCGATATAGACGTATGCGGGT 59.868 52.381 8.39 0.00 43.45 5.28
2575 2622 2.782163 CGATATAGACGTATGCGGGTG 58.218 52.381 8.39 0.00 43.45 4.61
2576 2623 2.477357 CGATATAGACGTATGCGGGTGG 60.477 54.545 8.39 0.00 43.45 4.61
2577 2624 1.985473 TATAGACGTATGCGGGTGGT 58.015 50.000 8.39 0.00 43.45 4.16
2578 2625 1.117150 ATAGACGTATGCGGGTGGTT 58.883 50.000 8.39 0.00 43.45 3.67
2579 2626 0.896923 TAGACGTATGCGGGTGGTTT 59.103 50.000 8.39 0.00 43.45 3.27
2580 2627 0.672401 AGACGTATGCGGGTGGTTTG 60.672 55.000 8.39 0.00 43.45 2.93
2581 2628 0.671163 GACGTATGCGGGTGGTTTGA 60.671 55.000 8.39 0.00 43.45 2.69
2582 2629 0.035820 ACGTATGCGGGTGGTTTGAT 60.036 50.000 8.39 0.00 43.45 2.57
2583 2630 0.376852 CGTATGCGGGTGGTTTGATG 59.623 55.000 0.00 0.00 0.00 3.07
2584 2631 0.738389 GTATGCGGGTGGTTTGATGG 59.262 55.000 0.00 0.00 0.00 3.51
2585 2632 0.329931 TATGCGGGTGGTTTGATGGT 59.670 50.000 0.00 0.00 0.00 3.55
2586 2633 0.541764 ATGCGGGTGGTTTGATGGTT 60.542 50.000 0.00 0.00 0.00 3.67
2587 2634 1.175983 TGCGGGTGGTTTGATGGTTC 61.176 55.000 0.00 0.00 0.00 3.62
2588 2635 1.175983 GCGGGTGGTTTGATGGTTCA 61.176 55.000 0.00 0.00 0.00 3.18
2589 2636 1.544724 CGGGTGGTTTGATGGTTCAT 58.455 50.000 0.00 0.00 0.00 2.57
2590 2637 1.202114 CGGGTGGTTTGATGGTTCATG 59.798 52.381 0.00 0.00 0.00 3.07
2591 2638 2.247358 GGGTGGTTTGATGGTTCATGT 58.753 47.619 0.00 0.00 0.00 3.21
2592 2639 2.632512 GGGTGGTTTGATGGTTCATGTT 59.367 45.455 0.00 0.00 0.00 2.71
2593 2640 3.554752 GGGTGGTTTGATGGTTCATGTTG 60.555 47.826 0.00 0.00 0.00 3.33
2594 2641 3.554752 GGTGGTTTGATGGTTCATGTTGG 60.555 47.826 0.00 0.00 0.00 3.77
2595 2642 3.320541 GTGGTTTGATGGTTCATGTTGGA 59.679 43.478 0.00 0.00 0.00 3.53
2596 2643 3.573538 TGGTTTGATGGTTCATGTTGGAG 59.426 43.478 0.00 0.00 0.00 3.86
2597 2644 3.826157 GGTTTGATGGTTCATGTTGGAGA 59.174 43.478 0.00 0.00 0.00 3.71
2598 2645 4.463891 GGTTTGATGGTTCATGTTGGAGAT 59.536 41.667 0.00 0.00 0.00 2.75
2599 2646 5.404946 GTTTGATGGTTCATGTTGGAGATG 58.595 41.667 0.00 0.00 0.00 2.90
2600 2647 3.018856 TGATGGTTCATGTTGGAGATGC 58.981 45.455 0.00 0.00 0.00 3.91
2601 2648 1.838112 TGGTTCATGTTGGAGATGCC 58.162 50.000 0.00 0.00 37.10 4.40
2602 2649 1.106285 GGTTCATGTTGGAGATGCCC 58.894 55.000 0.00 0.00 34.97 5.36
2603 2650 1.341383 GGTTCATGTTGGAGATGCCCT 60.341 52.381 0.00 0.00 34.97 5.19
2604 2651 2.450476 GTTCATGTTGGAGATGCCCTT 58.550 47.619 0.00 0.00 34.97 3.95
2605 2652 3.620488 GTTCATGTTGGAGATGCCCTTA 58.380 45.455 0.00 0.00 34.97 2.69
2606 2653 3.281727 TCATGTTGGAGATGCCCTTAC 57.718 47.619 0.00 0.00 34.97 2.34
2607 2654 2.092429 TCATGTTGGAGATGCCCTTACC 60.092 50.000 0.00 0.00 34.97 2.85
2608 2655 1.668826 TGTTGGAGATGCCCTTACCT 58.331 50.000 0.00 0.00 34.97 3.08
2609 2656 1.992557 TGTTGGAGATGCCCTTACCTT 59.007 47.619 0.00 0.00 34.97 3.50
2610 2657 3.186283 TGTTGGAGATGCCCTTACCTTA 58.814 45.455 0.00 0.00 34.97 2.69
2611 2658 3.785887 TGTTGGAGATGCCCTTACCTTAT 59.214 43.478 0.00 0.00 34.97 1.73
2612 2659 4.972568 TGTTGGAGATGCCCTTACCTTATA 59.027 41.667 0.00 0.00 34.97 0.98
2613 2660 5.430417 TGTTGGAGATGCCCTTACCTTATAA 59.570 40.000 0.00 0.00 34.97 0.98
2614 2661 5.825593 TGGAGATGCCCTTACCTTATAAG 57.174 43.478 5.43 5.43 34.97 1.73
2615 2662 5.224441 TGGAGATGCCCTTACCTTATAAGT 58.776 41.667 11.50 2.82 34.97 2.24
2616 2663 5.307196 TGGAGATGCCCTTACCTTATAAGTC 59.693 44.000 11.50 0.00 34.97 3.01
2617 2664 5.307196 GGAGATGCCCTTACCTTATAAGTCA 59.693 44.000 11.50 0.00 0.00 3.41
2618 2665 6.176014 AGATGCCCTTACCTTATAAGTCAC 57.824 41.667 11.50 0.00 0.00 3.67
2619 2666 4.395959 TGCCCTTACCTTATAAGTCACG 57.604 45.455 11.50 0.00 0.00 4.35
2620 2667 3.133362 TGCCCTTACCTTATAAGTCACGG 59.867 47.826 11.50 5.63 0.00 4.94
2621 2668 3.133542 GCCCTTACCTTATAAGTCACGGT 59.866 47.826 11.50 5.29 0.00 4.83
2622 2669 4.690122 CCCTTACCTTATAAGTCACGGTG 58.310 47.826 11.50 0.56 0.00 4.94
2623 2670 4.442472 CCCTTACCTTATAAGTCACGGTGG 60.442 50.000 11.50 1.94 0.00 4.61
2624 2671 4.161001 CCTTACCTTATAAGTCACGGTGGT 59.839 45.833 11.50 3.25 0.00 4.16
2625 2672 3.604875 ACCTTATAAGTCACGGTGGTG 57.395 47.619 11.50 0.00 45.78 4.17
2626 2673 2.235402 ACCTTATAAGTCACGGTGGTGG 59.765 50.000 11.50 2.48 44.50 4.61
2627 2674 2.235402 CCTTATAAGTCACGGTGGTGGT 59.765 50.000 11.50 0.00 44.50 4.16
2628 2675 3.259064 CTTATAAGTCACGGTGGTGGTG 58.741 50.000 8.50 0.00 44.50 4.17
2629 2676 1.344065 ATAAGTCACGGTGGTGGTGA 58.656 50.000 8.50 0.00 44.50 4.02
2630 2677 0.677288 TAAGTCACGGTGGTGGTGAG 59.323 55.000 8.50 0.00 44.43 3.51
2631 2678 2.660258 AAGTCACGGTGGTGGTGAGC 62.660 60.000 8.50 0.00 44.43 4.26
2632 2679 2.842462 TCACGGTGGTGGTGAGCT 60.842 61.111 8.50 0.00 44.50 4.09
2633 2680 2.357517 CACGGTGGTGGTGAGCTC 60.358 66.667 6.82 6.82 40.58 4.09
2634 2681 3.991051 ACGGTGGTGGTGAGCTCG 61.991 66.667 9.64 0.00 0.00 5.03
2635 2682 3.991051 CGGTGGTGGTGAGCTCGT 61.991 66.667 9.64 0.00 0.00 4.18
2636 2683 2.632544 CGGTGGTGGTGAGCTCGTA 61.633 63.158 9.64 0.00 0.00 3.43
2637 2684 1.215647 GGTGGTGGTGAGCTCGTAG 59.784 63.158 9.64 0.00 0.00 3.51
2638 2685 1.533469 GGTGGTGGTGAGCTCGTAGT 61.533 60.000 9.64 0.00 0.00 2.73
2639 2686 0.388649 GTGGTGGTGAGCTCGTAGTG 60.389 60.000 9.64 0.00 0.00 2.74
2640 2687 1.215647 GGTGGTGAGCTCGTAGTGG 59.784 63.158 9.64 0.00 0.00 4.00
2641 2688 1.248785 GGTGGTGAGCTCGTAGTGGA 61.249 60.000 9.64 0.00 0.00 4.02
2642 2689 0.818296 GTGGTGAGCTCGTAGTGGAT 59.182 55.000 9.64 0.00 0.00 3.41
2643 2690 2.022195 GTGGTGAGCTCGTAGTGGATA 58.978 52.381 9.64 0.00 0.00 2.59
2644 2691 2.033550 GTGGTGAGCTCGTAGTGGATAG 59.966 54.545 9.64 0.00 0.00 2.08
2645 2692 2.092592 TGGTGAGCTCGTAGTGGATAGA 60.093 50.000 9.64 0.00 0.00 1.98
2646 2693 2.550606 GGTGAGCTCGTAGTGGATAGAG 59.449 54.545 9.64 0.00 0.00 2.43
2647 2694 3.468770 GTGAGCTCGTAGTGGATAGAGA 58.531 50.000 9.64 0.00 32.84 3.10
2648 2695 4.069304 GTGAGCTCGTAGTGGATAGAGAT 58.931 47.826 9.64 0.00 32.84 2.75
2649 2696 4.068599 TGAGCTCGTAGTGGATAGAGATG 58.931 47.826 9.64 0.00 32.84 2.90
2650 2697 3.417101 AGCTCGTAGTGGATAGAGATGG 58.583 50.000 0.00 0.00 32.84 3.51
2651 2698 3.073209 AGCTCGTAGTGGATAGAGATGGA 59.927 47.826 0.00 0.00 32.84 3.41
2652 2699 3.438781 GCTCGTAGTGGATAGAGATGGAG 59.561 52.174 0.00 0.00 32.84 3.86
2653 2700 4.006989 CTCGTAGTGGATAGAGATGGAGG 58.993 52.174 0.00 0.00 32.84 4.30
2654 2701 3.394940 TCGTAGTGGATAGAGATGGAGGT 59.605 47.826 0.00 0.00 0.00 3.85
2655 2702 3.754323 CGTAGTGGATAGAGATGGAGGTC 59.246 52.174 0.00 0.00 0.00 3.85
2656 2703 3.252554 AGTGGATAGAGATGGAGGTCC 57.747 52.381 0.00 0.00 0.00 4.46
2657 2704 2.794760 AGTGGATAGAGATGGAGGTCCT 59.205 50.000 0.00 0.00 36.82 3.85
2658 2705 3.990933 AGTGGATAGAGATGGAGGTCCTA 59.009 47.826 0.00 0.00 36.82 2.94
2659 2706 4.420552 AGTGGATAGAGATGGAGGTCCTAA 59.579 45.833 0.00 0.00 36.82 2.69
2660 2707 5.077159 AGTGGATAGAGATGGAGGTCCTAAT 59.923 44.000 0.00 0.00 36.82 1.73
2661 2708 5.420739 GTGGATAGAGATGGAGGTCCTAATC 59.579 48.000 0.00 0.00 36.82 1.75
2662 2709 4.642885 GGATAGAGATGGAGGTCCTAATCG 59.357 50.000 0.00 0.00 36.82 3.34
2663 2710 2.883026 AGAGATGGAGGTCCTAATCGG 58.117 52.381 0.00 0.00 36.82 4.18
2664 2711 1.896465 GAGATGGAGGTCCTAATCGGG 59.104 57.143 0.00 0.00 36.82 5.14
2665 2712 1.503784 AGATGGAGGTCCTAATCGGGA 59.496 52.381 0.00 0.00 36.82 5.14
2666 2713 2.112691 AGATGGAGGTCCTAATCGGGAT 59.887 50.000 0.00 0.00 37.73 3.85
2667 2714 3.336997 AGATGGAGGTCCTAATCGGGATA 59.663 47.826 0.00 0.00 37.73 2.59
2668 2715 3.170991 TGGAGGTCCTAATCGGGATAG 57.829 52.381 0.00 0.00 37.73 2.08
2669 2716 2.720254 TGGAGGTCCTAATCGGGATAGA 59.280 50.000 0.00 0.00 37.73 1.98
2670 2717 3.245300 TGGAGGTCCTAATCGGGATAGAG 60.245 52.174 0.00 0.00 37.73 2.43
2671 2718 2.756207 GAGGTCCTAATCGGGATAGAGC 59.244 54.545 0.00 0.00 37.73 4.09
2672 2719 2.110188 AGGTCCTAATCGGGATAGAGCA 59.890 50.000 0.00 0.00 37.73 4.26
2673 2720 2.231721 GGTCCTAATCGGGATAGAGCAC 59.768 54.545 0.00 0.00 37.73 4.40
2674 2721 2.891580 GTCCTAATCGGGATAGAGCACA 59.108 50.000 0.00 0.00 37.73 4.57
2675 2722 3.321111 GTCCTAATCGGGATAGAGCACAA 59.679 47.826 0.00 0.00 37.73 3.33
2676 2723 3.321111 TCCTAATCGGGATAGAGCACAAC 59.679 47.826 0.00 0.00 0.00 3.32
2677 2724 2.622064 AATCGGGATAGAGCACAACC 57.378 50.000 0.00 0.00 0.00 3.77
2678 2725 0.759346 ATCGGGATAGAGCACAACCC 59.241 55.000 0.00 0.00 37.42 4.11
2679 2726 0.325296 TCGGGATAGAGCACAACCCT 60.325 55.000 0.00 0.00 38.51 4.34
2680 2727 0.179073 CGGGATAGAGCACAACCCTG 60.179 60.000 0.00 0.00 38.51 4.45
2681 2728 0.181350 GGGATAGAGCACAACCCTGG 59.819 60.000 0.00 0.00 37.75 4.45
2682 2729 0.912486 GGATAGAGCACAACCCTGGT 59.088 55.000 0.00 0.00 0.00 4.00
2683 2730 1.407437 GGATAGAGCACAACCCTGGTG 60.407 57.143 0.00 0.00 39.25 4.17
2684 2731 1.555075 GATAGAGCACAACCCTGGTGA 59.445 52.381 0.00 0.00 38.54 4.02
2685 2732 0.685097 TAGAGCACAACCCTGGTGAC 59.315 55.000 0.00 0.00 38.54 3.67
2686 2733 1.056700 AGAGCACAACCCTGGTGACT 61.057 55.000 0.00 0.00 38.54 3.41
2687 2734 0.886490 GAGCACAACCCTGGTGACTG 60.886 60.000 0.00 0.00 38.54 3.51
2688 2735 1.152963 GCACAACCCTGGTGACTGT 60.153 57.895 0.00 0.00 38.54 3.55
2689 2736 0.751643 GCACAACCCTGGTGACTGTT 60.752 55.000 0.00 0.00 38.54 3.16
2690 2737 1.308998 CACAACCCTGGTGACTGTTC 58.691 55.000 0.00 0.00 38.54 3.18
2691 2738 1.134098 CACAACCCTGGTGACTGTTCT 60.134 52.381 0.00 0.00 38.54 3.01
2692 2739 1.141053 ACAACCCTGGTGACTGTTCTC 59.859 52.381 0.00 0.00 0.00 2.87
2693 2740 0.393077 AACCCTGGTGACTGTTCTCG 59.607 55.000 0.00 0.00 0.00 4.04
2694 2741 1.293498 CCCTGGTGACTGTTCTCGG 59.707 63.158 0.00 0.00 0.00 4.63
2695 2742 1.374758 CCTGGTGACTGTTCTCGGC 60.375 63.158 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 133 3.473923 TGAGAGCATTCTTGTGTGACA 57.526 42.857 0.00 0.00 32.53 3.58
164 165 0.250684 TTGCTTGGCTTGTCATCGGA 60.251 50.000 0.00 0.00 0.00 4.55
218 219 6.676237 TCACGCTCATATATTGCTTGAAAA 57.324 33.333 11.67 0.00 33.24 2.29
224 225 4.071961 TGGTTCACGCTCATATATTGCT 57.928 40.909 6.08 0.00 0.00 3.91
239 240 5.125356 CCATAGTGCTATGTTCATGGTTCA 58.875 41.667 15.52 0.00 40.90 3.18
242 243 3.459598 ACCCATAGTGCTATGTTCATGGT 59.540 43.478 15.52 12.40 40.90 3.55
248 249 7.136822 TCTATTTCACCCATAGTGCTATGTT 57.863 36.000 15.52 2.70 46.81 2.71
321 326 4.584325 GCCCATTGATTAGCCTTGTTGATA 59.416 41.667 0.00 0.00 0.00 2.15
440 445 2.890945 GGATGCACACCCACTAGTTTTT 59.109 45.455 0.00 0.00 0.00 1.94
441 446 2.158534 TGGATGCACACCCACTAGTTTT 60.159 45.455 8.94 0.00 0.00 2.43
468 476 2.356125 GCCCTAGGTCTTCATGAGCAAA 60.356 50.000 8.29 0.00 44.98 3.68
708 724 1.875514 CCGTGCACATCCAATATGAGG 59.124 52.381 18.64 0.83 0.00 3.86
709 725 2.564771 ACCGTGCACATCCAATATGAG 58.435 47.619 18.64 0.00 0.00 2.90
712 728 7.498900 CCAATATATACCGTGCACATCCAATAT 59.501 37.037 18.64 13.33 0.00 1.28
714 730 5.647658 CCAATATATACCGTGCACATCCAAT 59.352 40.000 18.64 6.92 0.00 3.16
715 731 5.000591 CCAATATATACCGTGCACATCCAA 58.999 41.667 18.64 0.00 0.00 3.53
716 732 4.284746 TCCAATATATACCGTGCACATCCA 59.715 41.667 18.64 0.00 0.00 3.41
717 733 4.827692 TCCAATATATACCGTGCACATCC 58.172 43.478 18.64 0.00 0.00 3.51
718 734 5.874810 ACATCCAATATATACCGTGCACATC 59.125 40.000 18.64 0.00 0.00 3.06
719 735 5.804639 ACATCCAATATATACCGTGCACAT 58.195 37.500 18.64 6.75 0.00 3.21
720 736 5.222079 ACATCCAATATATACCGTGCACA 57.778 39.130 18.64 0.00 0.00 4.57
721 737 7.039270 TCATACATCCAATATATACCGTGCAC 58.961 38.462 6.82 6.82 0.00 4.57
722 738 7.176589 TCATACATCCAATATATACCGTGCA 57.823 36.000 0.00 0.00 0.00 4.57
723 739 8.662781 ATTCATACATCCAATATATACCGTGC 57.337 34.615 0.00 0.00 0.00 5.34
725 741 9.109393 GCAATTCATACATCCAATATATACCGT 57.891 33.333 0.00 0.00 0.00 4.83
726 742 9.108284 TGCAATTCATACATCCAATATATACCG 57.892 33.333 0.00 0.00 0.00 4.02
728 744 9.920826 CGTGCAATTCATACATCCAATATATAC 57.079 33.333 0.00 0.00 0.00 1.47
729 745 9.883142 TCGTGCAATTCATACATCCAATATATA 57.117 29.630 0.00 0.00 0.00 0.86
730 746 8.791327 TCGTGCAATTCATACATCCAATATAT 57.209 30.769 0.00 0.00 0.00 0.86
731 747 8.667463 CATCGTGCAATTCATACATCCAATATA 58.333 33.333 0.00 0.00 0.00 0.86
732 748 7.175467 ACATCGTGCAATTCATACATCCAATAT 59.825 33.333 0.00 0.00 0.00 1.28
733 749 6.486320 ACATCGTGCAATTCATACATCCAATA 59.514 34.615 0.00 0.00 0.00 1.90
734 750 5.300034 ACATCGTGCAATTCATACATCCAAT 59.700 36.000 0.00 0.00 0.00 3.16
735 751 4.639755 ACATCGTGCAATTCATACATCCAA 59.360 37.500 0.00 0.00 0.00 3.53
736 752 4.198530 ACATCGTGCAATTCATACATCCA 58.801 39.130 0.00 0.00 0.00 3.41
737 753 4.818534 ACATCGTGCAATTCATACATCC 57.181 40.909 0.00 0.00 0.00 3.51
738 754 7.575365 TCAATACATCGTGCAATTCATACATC 58.425 34.615 0.00 0.00 0.00 3.06
739 755 7.495135 TCAATACATCGTGCAATTCATACAT 57.505 32.000 0.00 0.00 0.00 2.29
740 756 6.917217 TCAATACATCGTGCAATTCATACA 57.083 33.333 0.00 0.00 0.00 2.29
741 757 7.266966 CGAATCAATACATCGTGCAATTCATAC 59.733 37.037 0.00 0.00 0.00 2.39
742 758 7.290118 CGAATCAATACATCGTGCAATTCATA 58.710 34.615 0.00 0.00 0.00 2.15
743 759 6.138088 CGAATCAATACATCGTGCAATTCAT 58.862 36.000 0.00 0.00 0.00 2.57
744 760 5.500825 CGAATCAATACATCGTGCAATTCA 58.499 37.500 0.00 0.00 0.00 2.57
745 761 4.905866 CCGAATCAATACATCGTGCAATTC 59.094 41.667 0.00 0.00 34.90 2.17
746 762 4.335315 ACCGAATCAATACATCGTGCAATT 59.665 37.500 0.00 0.00 34.90 2.32
747 763 3.876914 ACCGAATCAATACATCGTGCAAT 59.123 39.130 0.00 0.00 34.90 3.56
748 764 3.063316 CACCGAATCAATACATCGTGCAA 59.937 43.478 0.00 0.00 34.90 4.08
749 765 2.607180 CACCGAATCAATACATCGTGCA 59.393 45.455 0.00 0.00 34.90 4.57
750 766 2.599848 GCACCGAATCAATACATCGTGC 60.600 50.000 0.00 0.00 36.89 5.34
751 767 2.607180 TGCACCGAATCAATACATCGTG 59.393 45.455 0.00 0.00 34.90 4.35
752 768 2.899976 TGCACCGAATCAATACATCGT 58.100 42.857 0.00 0.00 34.90 3.73
753 769 3.942539 TTGCACCGAATCAATACATCG 57.057 42.857 0.00 0.00 36.39 3.84
754 770 4.971830 CACATTGCACCGAATCAATACATC 59.028 41.667 0.00 0.00 32.22 3.06
755 771 4.734402 GCACATTGCACCGAATCAATACAT 60.734 41.667 0.00 0.00 44.26 2.29
756 772 3.427368 GCACATTGCACCGAATCAATACA 60.427 43.478 0.00 0.00 44.26 2.29
757 773 3.108144 GCACATTGCACCGAATCAATAC 58.892 45.455 0.00 0.00 44.26 1.89
758 774 3.419264 GCACATTGCACCGAATCAATA 57.581 42.857 0.00 0.00 44.26 1.90
759 775 2.282701 GCACATTGCACCGAATCAAT 57.717 45.000 0.00 0.00 44.26 2.57
760 776 3.790744 GCACATTGCACCGAATCAA 57.209 47.368 0.00 0.00 44.26 2.57
770 786 6.721571 ACTTATATATACCGTGCACATTGC 57.278 37.500 18.64 0.00 45.29 3.56
774 790 9.246670 ACCTTATACTTATATATACCGTGCACA 57.753 33.333 18.64 0.00 0.00 4.57
775 791 9.512435 CACCTTATACTTATATATACCGTGCAC 57.488 37.037 6.82 6.82 0.00 4.57
776 792 9.465199 TCACCTTATACTTATATATACCGTGCA 57.535 33.333 0.00 0.00 0.00 4.57
777 793 9.947669 CTCACCTTATACTTATATATACCGTGC 57.052 37.037 0.00 0.00 0.00 5.34
779 795 9.129532 GCCTCACCTTATACTTATATATACCGT 57.870 37.037 0.00 0.00 0.00 4.83
780 796 9.128404 TGCCTCACCTTATACTTATATATACCG 57.872 37.037 0.00 0.00 0.00 4.02
786 802 9.203163 GGTAGATGCCTCACCTTATACTTATAT 57.797 37.037 0.00 0.00 0.00 0.86
787 803 8.399529 AGGTAGATGCCTCACCTTATACTTATA 58.600 37.037 7.11 0.00 39.73 0.98
788 804 7.249715 AGGTAGATGCCTCACCTTATACTTAT 58.750 38.462 7.11 0.00 39.73 1.73
789 805 6.621394 AGGTAGATGCCTCACCTTATACTTA 58.379 40.000 7.11 0.00 39.73 2.24
790 806 5.468658 AGGTAGATGCCTCACCTTATACTT 58.531 41.667 7.11 0.00 39.73 2.24
791 807 5.081315 AGGTAGATGCCTCACCTTATACT 57.919 43.478 7.11 0.00 39.73 2.12
802 818 6.554982 TGTTGTATAGATTGAGGTAGATGCCT 59.445 38.462 0.00 0.00 42.53 4.75
803 819 6.759272 TGTTGTATAGATTGAGGTAGATGCC 58.241 40.000 0.00 0.00 0.00 4.40
804 820 8.552034 GTTTGTTGTATAGATTGAGGTAGATGC 58.448 37.037 0.00 0.00 0.00 3.91
805 821 9.823647 AGTTTGTTGTATAGATTGAGGTAGATG 57.176 33.333 0.00 0.00 0.00 2.90
817 833 8.780249 GCTCACCTTTTTAGTTTGTTGTATAGA 58.220 33.333 0.00 0.00 0.00 1.98
818 834 8.021396 GGCTCACCTTTTTAGTTTGTTGTATAG 58.979 37.037 0.00 0.00 0.00 1.31
819 835 7.878036 GGCTCACCTTTTTAGTTTGTTGTATA 58.122 34.615 0.00 0.00 0.00 1.47
820 836 6.745116 GGCTCACCTTTTTAGTTTGTTGTAT 58.255 36.000 0.00 0.00 0.00 2.29
821 837 6.139048 GGCTCACCTTTTTAGTTTGTTGTA 57.861 37.500 0.00 0.00 0.00 2.41
822 838 5.006153 GGCTCACCTTTTTAGTTTGTTGT 57.994 39.130 0.00 0.00 0.00 3.32
837 853 3.887621 TGTACATTGACTAGGCTCACC 57.112 47.619 0.00 0.00 0.00 4.02
838 854 3.557595 GCATGTACATTGACTAGGCTCAC 59.442 47.826 5.37 0.00 0.00 3.51
839 855 3.197549 TGCATGTACATTGACTAGGCTCA 59.802 43.478 5.37 0.00 0.00 4.26
840 856 3.557595 GTGCATGTACATTGACTAGGCTC 59.442 47.826 5.37 2.24 0.00 4.70
841 857 3.055167 TGTGCATGTACATTGACTAGGCT 60.055 43.478 13.02 0.00 0.00 4.58
842 858 3.270027 TGTGCATGTACATTGACTAGGC 58.730 45.455 13.02 5.38 0.00 3.93
843 859 4.758688 TCTGTGCATGTACATTGACTAGG 58.241 43.478 17.33 3.32 0.00 3.02
844 860 7.492344 TGTTATCTGTGCATGTACATTGACTAG 59.508 37.037 17.33 4.05 0.00 2.57
845 861 7.327214 TGTTATCTGTGCATGTACATTGACTA 58.673 34.615 17.33 4.72 0.00 2.59
846 862 6.172630 TGTTATCTGTGCATGTACATTGACT 58.827 36.000 17.33 5.53 0.00 3.41
847 863 6.421377 TGTTATCTGTGCATGTACATTGAC 57.579 37.500 17.33 14.01 0.00 3.18
848 864 7.986889 AGTATGTTATCTGTGCATGTACATTGA 59.013 33.333 17.33 12.19 0.00 2.57
849 865 8.146479 AGTATGTTATCTGTGCATGTACATTG 57.854 34.615 17.33 6.95 0.00 2.82
850 866 7.986889 TGAGTATGTTATCTGTGCATGTACATT 59.013 33.333 17.33 10.39 0.00 2.71
851 867 7.500141 TGAGTATGTTATCTGTGCATGTACAT 58.500 34.615 17.33 1.41 0.00 2.29
852 868 6.872920 TGAGTATGTTATCTGTGCATGTACA 58.127 36.000 16.13 16.13 0.00 2.90
853 869 7.277760 TGTTGAGTATGTTATCTGTGCATGTAC 59.722 37.037 7.03 7.03 0.00 2.90
854 870 7.327214 TGTTGAGTATGTTATCTGTGCATGTA 58.673 34.615 0.00 0.00 0.00 2.29
855 871 6.172630 TGTTGAGTATGTTATCTGTGCATGT 58.827 36.000 0.00 0.00 0.00 3.21
856 872 6.238293 CCTGTTGAGTATGTTATCTGTGCATG 60.238 42.308 0.00 0.00 0.00 4.06
857 873 5.819379 CCTGTTGAGTATGTTATCTGTGCAT 59.181 40.000 0.00 0.00 0.00 3.96
858 874 5.178061 CCTGTTGAGTATGTTATCTGTGCA 58.822 41.667 0.00 0.00 0.00 4.57
859 875 4.572389 CCCTGTTGAGTATGTTATCTGTGC 59.428 45.833 0.00 0.00 0.00 4.57
860 876 5.977635 TCCCTGTTGAGTATGTTATCTGTG 58.022 41.667 0.00 0.00 0.00 3.66
861 877 5.958380 TCTCCCTGTTGAGTATGTTATCTGT 59.042 40.000 0.00 0.00 33.93 3.41
862 878 6.471233 TCTCCCTGTTGAGTATGTTATCTG 57.529 41.667 0.00 0.00 33.93 2.90
863 879 7.496346 TTTCTCCCTGTTGAGTATGTTATCT 57.504 36.000 0.00 0.00 33.93 1.98
864 880 7.770897 ACATTTCTCCCTGTTGAGTATGTTATC 59.229 37.037 0.00 0.00 36.37 1.75
865 881 7.633789 ACATTTCTCCCTGTTGAGTATGTTAT 58.366 34.615 0.00 0.00 36.37 1.89
866 882 7.016153 ACATTTCTCCCTGTTGAGTATGTTA 57.984 36.000 0.00 0.00 36.37 2.41
867 883 5.880901 ACATTTCTCCCTGTTGAGTATGTT 58.119 37.500 0.00 0.00 36.37 2.71
868 884 5.505181 ACATTTCTCCCTGTTGAGTATGT 57.495 39.130 0.00 0.00 35.70 2.29
876 892 5.388654 AGTCATTCAACATTTCTCCCTGTT 58.611 37.500 0.00 0.00 36.04 3.16
877 893 4.990526 AGTCATTCAACATTTCTCCCTGT 58.009 39.130 0.00 0.00 0.00 4.00
878 894 5.005740 TGAGTCATTCAACATTTCTCCCTG 58.994 41.667 0.00 0.00 31.34 4.45
879 895 5.246981 TGAGTCATTCAACATTTCTCCCT 57.753 39.130 0.00 0.00 31.34 4.20
910 926 7.636326 ACATATAACTCGCGGGAAATAAAAAG 58.364 34.615 15.95 0.00 0.00 2.27
986 1015 3.002791 TGGTCGATGATGCAACTTCTTC 58.997 45.455 8.00 1.02 0.00 2.87
987 1016 2.744202 GTGGTCGATGATGCAACTTCTT 59.256 45.455 8.00 0.00 0.00 2.52
988 1017 2.350522 GTGGTCGATGATGCAACTTCT 58.649 47.619 8.00 0.00 0.00 2.85
1110 1139 3.429141 GGAGAGCCACGACGTCGA 61.429 66.667 41.52 0.00 43.02 4.20
1343 1372 2.436115 GTGGTTGTAGAGCCCCGC 60.436 66.667 0.00 0.00 0.00 6.13
1399 1428 2.025898 TCAAGACACACGTACACCTCA 58.974 47.619 0.00 0.00 0.00 3.86
1426 1455 4.388499 ATCGTTTGGGCGAGCGGT 62.388 61.111 0.00 0.00 44.43 5.68
1487 1524 2.056094 ACTAGTTGTTCGCCGTACAC 57.944 50.000 0.00 0.00 0.00 2.90
1491 1528 1.494824 GTCAACTAGTTGTTCGCCGT 58.505 50.000 29.83 0.00 41.16 5.68
1504 1541 1.598130 GTTGGAGCAGGCGTCAACT 60.598 57.895 18.37 0.00 37.21 3.16
1581 1618 3.648067 GTCATACAGAATGGGGGAGATGA 59.352 47.826 0.00 0.00 43.62 2.92
1591 1628 0.869880 TCGCGCGGTCATACAGAATG 60.870 55.000 31.69 0.00 46.00 2.67
1640 1677 1.523258 CAAGCTCTCATGGCTCCGG 60.523 63.158 0.00 0.00 39.30 5.14
1694 1735 4.712122 ACACACCCAGTTTGTAACTTTG 57.288 40.909 0.00 0.00 40.46 2.77
1723 1764 4.288626 TGGTCAGGCAAGTAGAACCTTATT 59.711 41.667 0.00 0.00 0.00 1.40
1724 1765 3.844211 TGGTCAGGCAAGTAGAACCTTAT 59.156 43.478 0.00 0.00 0.00 1.73
1725 1766 3.244582 TGGTCAGGCAAGTAGAACCTTA 58.755 45.455 0.00 0.00 0.00 2.69
1726 1767 2.054799 TGGTCAGGCAAGTAGAACCTT 58.945 47.619 0.00 0.00 0.00 3.50
1733 1774 4.647424 CAAAGTTTTGGTCAGGCAAGTA 57.353 40.909 0.00 0.00 34.59 2.24
1759 1800 5.263599 TGGCCATGATTCAAAGACAGTTAT 58.736 37.500 0.00 0.00 0.00 1.89
1767 1808 3.947910 ACACTTGGCCATGATTCAAAG 57.052 42.857 24.48 10.36 0.00 2.77
1768 1809 3.640498 TCAACACTTGGCCATGATTCAAA 59.360 39.130 24.48 0.00 0.00 2.69
1779 1826 0.875059 GCAGGTACTCAACACTTGGC 59.125 55.000 0.00 0.00 34.60 4.52
1783 1830 5.031066 TGTTTTAGCAGGTACTCAACACT 57.969 39.130 0.00 0.00 34.60 3.55
1784 1831 5.941948 ATGTTTTAGCAGGTACTCAACAC 57.058 39.130 0.00 0.00 34.60 3.32
1785 1832 5.240623 CCAATGTTTTAGCAGGTACTCAACA 59.759 40.000 0.00 2.25 34.60 3.33
1786 1833 5.699839 CCAATGTTTTAGCAGGTACTCAAC 58.300 41.667 0.00 0.00 34.60 3.18
1788 1835 3.756434 GCCAATGTTTTAGCAGGTACTCA 59.244 43.478 0.00 0.00 34.60 3.41
1789 1836 3.756434 TGCCAATGTTTTAGCAGGTACTC 59.244 43.478 0.00 0.00 34.60 2.59
1790 1837 3.761897 TGCCAATGTTTTAGCAGGTACT 58.238 40.909 0.00 0.00 43.88 2.73
1805 1852 8.776470 CAGAAATAGACAAACAATTTTGCCAAT 58.224 29.630 0.00 0.00 45.32 3.16
1824 1871 6.818644 GGCACTGAGTTCTCAATACAGAAATA 59.181 38.462 0.00 0.00 34.11 1.40
1845 1892 7.011669 ACGTTTACCACTATAAATACATGGCAC 59.988 37.037 0.00 0.00 33.46 5.01
1889 1936 5.663456 CAAATGGCATTTGTGGTAAGCTAT 58.337 37.500 34.13 5.69 43.47 2.97
1916 1963 6.039829 CAGCGTATAGGGATGCAGATAATCTA 59.960 42.308 0.00 0.00 33.52 1.98
1945 1992 8.422577 AATAAACAACTTTTCTCCAAGCCTAT 57.577 30.769 0.00 0.00 0.00 2.57
1948 1995 5.629435 CGAATAAACAACTTTTCTCCAAGCC 59.371 40.000 0.00 0.00 0.00 4.35
1952 1999 4.580995 TGCCGAATAAACAACTTTTCTCCA 59.419 37.500 0.00 0.00 0.00 3.86
1955 2002 5.709966 GGATGCCGAATAAACAACTTTTCT 58.290 37.500 0.00 0.00 0.00 2.52
1963 2010 2.020720 AATGCGGATGCCGAATAAACA 58.979 42.857 10.44 0.00 45.79 2.83
2012 2059 3.414700 GTGAAGGCGGTGCTGACG 61.415 66.667 0.00 0.00 0.00 4.35
2015 2062 1.376424 AGATGTGAAGGCGGTGCTG 60.376 57.895 0.00 0.00 0.00 4.41
2018 2065 1.003355 ACCAGATGTGAAGGCGGTG 60.003 57.895 0.00 0.00 0.00 4.94
2019 2066 1.296715 GACCAGATGTGAAGGCGGT 59.703 57.895 0.00 0.00 0.00 5.68
2021 2068 1.354337 CGTGACCAGATGTGAAGGCG 61.354 60.000 0.00 0.00 0.00 5.52
2030 2077 1.893137 TGTTGAGCTACGTGACCAGAT 59.107 47.619 0.00 0.00 0.00 2.90
2033 2080 1.616374 TGATGTTGAGCTACGTGACCA 59.384 47.619 0.00 0.00 0.00 4.02
2038 2085 3.925379 TGACATTGATGTTGAGCTACGT 58.075 40.909 0.00 0.00 41.95 3.57
2042 2089 2.089980 GGCTGACATTGATGTTGAGCT 58.910 47.619 19.75 0.00 42.01 4.09
2048 2095 1.651240 GCAGCGGCTGACATTGATGT 61.651 55.000 32.72 0.00 39.55 3.06
2054 2101 3.515286 GCATGCAGCGGCTGACAT 61.515 61.111 32.72 27.79 41.91 3.06
2072 2119 0.458889 CGCATTCATGTTGGCCAAGG 60.459 55.000 21.21 11.98 0.00 3.61
2075 2122 3.004326 GCCGCATTCATGTTGGCCA 62.004 57.895 0.00 0.00 42.06 5.36
2079 2126 2.945576 CGCGCCGCATTCATGTTG 60.946 61.111 10.75 0.00 0.00 3.33
2094 2141 1.322538 ACTTTCCATCCAATGCCCGC 61.323 55.000 0.00 0.00 0.00 6.13
2097 2144 0.179129 CGCACTTTCCATCCAATGCC 60.179 55.000 0.00 0.00 0.00 4.40
2100 2147 0.331278 TCCCGCACTTTCCATCCAAT 59.669 50.000 0.00 0.00 0.00 3.16
2130 2177 2.111792 ACCCTAGCCCACAAAAATTCCT 59.888 45.455 0.00 0.00 0.00 3.36
2133 2180 2.256306 CCACCCTAGCCCACAAAAATT 58.744 47.619 0.00 0.00 0.00 1.82
2146 2193 2.129146 CCCGCGTATGACCACCCTA 61.129 63.158 4.92 0.00 0.00 3.53
2151 2198 2.125310 CAAGCCCGCGTATGACCA 60.125 61.111 4.92 0.00 0.00 4.02
2160 2207 4.179579 GATCGTTGCCAAGCCCGC 62.180 66.667 0.00 0.00 0.00 6.13
2484 2531 0.312729 GGTGGTCCGAACGCATTTTT 59.687 50.000 0.00 0.00 0.00 1.94
2485 2532 1.520600 GGGTGGTCCGAACGCATTTT 61.521 55.000 0.00 0.00 33.83 1.82
2486 2533 1.969589 GGGTGGTCCGAACGCATTT 60.970 57.895 0.00 0.00 33.83 2.32
2487 2534 2.359478 GGGTGGTCCGAACGCATT 60.359 61.111 0.00 0.00 33.83 3.56
2488 2535 3.605749 CTGGGTGGTCCGAACGCAT 62.606 63.158 0.00 0.00 39.42 4.73
2489 2536 4.308458 CTGGGTGGTCCGAACGCA 62.308 66.667 0.00 0.02 38.06 5.24
2498 2545 3.968837 TATCGGTCCGCTGGGTGGT 62.969 63.158 6.34 0.00 34.40 4.16
2499 2546 3.151710 TATCGGTCCGCTGGGTGG 61.152 66.667 6.34 0.00 33.83 4.61
2500 2547 2.106332 GTATCGGTCCGCTGGGTG 59.894 66.667 6.34 0.00 33.83 4.61
2501 2548 2.363276 TGTATCGGTCCGCTGGGT 60.363 61.111 6.34 0.00 33.83 4.51
2502 2549 2.417516 CTGTATCGGTCCGCTGGG 59.582 66.667 6.34 0.00 0.00 4.45
2503 2550 2.417516 CCTGTATCGGTCCGCTGG 59.582 66.667 6.34 2.61 0.00 4.85
2504 2551 2.279517 GCCTGTATCGGTCCGCTG 60.280 66.667 6.34 0.00 0.00 5.18
2505 2552 3.537874 GGCCTGTATCGGTCCGCT 61.538 66.667 6.34 0.00 0.00 5.52
2506 2553 4.603946 GGGCCTGTATCGGTCCGC 62.604 72.222 6.34 0.00 39.41 5.54
2508 2555 4.603946 GCGGGCCTGTATCGGTCC 62.604 72.222 14.55 0.00 45.64 4.46
2509 2556 2.660258 AATGCGGGCCTGTATCGGTC 62.660 60.000 16.25 0.00 0.00 4.79
2510 2557 2.742116 AATGCGGGCCTGTATCGGT 61.742 57.895 16.25 0.00 0.00 4.69
2511 2558 2.111043 AATGCGGGCCTGTATCGG 59.889 61.111 16.25 0.00 0.00 4.18
2512 2559 2.253758 CCAATGCGGGCCTGTATCG 61.254 63.158 16.25 4.36 0.00 2.92
2513 2560 0.250901 ATCCAATGCGGGCCTGTATC 60.251 55.000 16.25 0.00 34.36 2.24
2514 2561 0.538057 CATCCAATGCGGGCCTGTAT 60.538 55.000 14.55 12.12 34.36 2.29
2515 2562 1.152984 CATCCAATGCGGGCCTGTA 60.153 57.895 14.55 9.72 34.36 2.74
2516 2563 2.440796 CATCCAATGCGGGCCTGT 60.441 61.111 14.55 0.00 34.36 4.00
2517 2564 2.440796 ACATCCAATGCGGGCCTG 60.441 61.111 7.41 7.41 34.36 4.85
2518 2565 2.124151 GACATCCAATGCGGGCCT 60.124 61.111 0.84 0.00 34.36 5.19
2519 2566 2.440065 TGACATCCAATGCGGGCC 60.440 61.111 0.00 0.00 34.36 5.80
2520 2567 1.594194 TTGTGACATCCAATGCGGGC 61.594 55.000 0.00 0.00 34.36 6.13
2521 2568 0.171007 GTTGTGACATCCAATGCGGG 59.829 55.000 0.00 0.00 34.36 6.13
2522 2569 0.880441 TGTTGTGACATCCAATGCGG 59.120 50.000 0.00 0.00 0.00 5.69
2523 2570 2.095110 ACATGTTGTGACATCCAATGCG 60.095 45.455 0.00 0.00 44.55 4.73
2524 2571 3.581024 ACATGTTGTGACATCCAATGC 57.419 42.857 0.00 0.00 44.55 3.56
2525 2572 4.687018 CCAAACATGTTGTGACATCCAATG 59.313 41.667 12.82 1.71 44.55 2.82
2526 2573 4.588106 TCCAAACATGTTGTGACATCCAAT 59.412 37.500 12.82 0.00 44.55 3.16
2527 2574 3.956848 TCCAAACATGTTGTGACATCCAA 59.043 39.130 12.82 0.00 44.55 3.53
2528 2575 3.317711 GTCCAAACATGTTGTGACATCCA 59.682 43.478 24.86 0.00 44.55 3.41
2529 2576 3.305335 GGTCCAAACATGTTGTGACATCC 60.305 47.826 28.11 16.02 44.55 3.51
2530 2577 3.609175 CGGTCCAAACATGTTGTGACATC 60.609 47.826 28.11 17.61 44.55 3.06
2532 2579 1.673400 CGGTCCAAACATGTTGTGACA 59.327 47.619 28.11 12.24 40.71 3.58
2533 2580 1.673920 ACGGTCCAAACATGTTGTGAC 59.326 47.619 23.05 23.05 0.00 3.67
2534 2581 1.673400 CACGGTCCAAACATGTTGTGA 59.327 47.619 12.82 8.97 0.00 3.58
2535 2582 1.863624 GCACGGTCCAAACATGTTGTG 60.864 52.381 12.82 14.93 0.00 3.33
2536 2583 0.383949 GCACGGTCCAAACATGTTGT 59.616 50.000 12.82 1.18 0.00 3.32
2537 2584 0.660005 CGCACGGTCCAAACATGTTG 60.660 55.000 12.82 6.46 0.00 3.33
2538 2585 0.816018 TCGCACGGTCCAAACATGTT 60.816 50.000 4.92 4.92 0.00 2.71
2539 2586 0.605319 ATCGCACGGTCCAAACATGT 60.605 50.000 0.00 0.00 0.00 3.21
2540 2587 1.364721 TATCGCACGGTCCAAACATG 58.635 50.000 0.00 0.00 0.00 3.21
2541 2588 2.325583 ATATCGCACGGTCCAAACAT 57.674 45.000 0.00 0.00 0.00 2.71
2542 2589 2.427812 TCTATATCGCACGGTCCAAACA 59.572 45.455 0.00 0.00 0.00 2.83
2543 2590 2.793232 GTCTATATCGCACGGTCCAAAC 59.207 50.000 0.00 0.00 0.00 2.93
2544 2591 2.542205 CGTCTATATCGCACGGTCCAAA 60.542 50.000 0.00 0.00 0.00 3.28
2545 2592 1.002142 CGTCTATATCGCACGGTCCAA 60.002 52.381 0.00 0.00 0.00 3.53
2546 2593 0.589708 CGTCTATATCGCACGGTCCA 59.410 55.000 0.00 0.00 0.00 4.02
2547 2594 0.590195 ACGTCTATATCGCACGGTCC 59.410 55.000 6.11 0.00 37.86 4.46
2548 2595 3.414464 CATACGTCTATATCGCACGGTC 58.586 50.000 0.00 0.00 37.86 4.79
2549 2596 2.413765 GCATACGTCTATATCGCACGGT 60.414 50.000 0.00 0.00 37.86 4.83
2550 2597 2.174764 GCATACGTCTATATCGCACGG 58.825 52.381 0.00 0.00 37.86 4.94
2551 2598 1.832402 CGCATACGTCTATATCGCACG 59.168 52.381 0.00 0.00 39.48 5.34
2552 2599 2.174764 CCGCATACGTCTATATCGCAC 58.825 52.381 0.00 0.00 37.70 5.34
2553 2600 1.131693 CCCGCATACGTCTATATCGCA 59.868 52.381 0.00 0.00 37.70 5.10
2554 2601 1.131883 ACCCGCATACGTCTATATCGC 59.868 52.381 0.00 0.00 37.70 4.58
2555 2602 2.477357 CCACCCGCATACGTCTATATCG 60.477 54.545 0.00 0.00 37.70 2.92
2556 2603 2.490903 ACCACCCGCATACGTCTATATC 59.509 50.000 0.00 0.00 37.70 1.63
2557 2604 2.522185 ACCACCCGCATACGTCTATAT 58.478 47.619 0.00 0.00 37.70 0.86
2558 2605 1.985473 ACCACCCGCATACGTCTATA 58.015 50.000 0.00 0.00 37.70 1.31
2559 2606 1.117150 AACCACCCGCATACGTCTAT 58.883 50.000 0.00 0.00 37.70 1.98
2560 2607 0.896923 AAACCACCCGCATACGTCTA 59.103 50.000 0.00 0.00 37.70 2.59
2561 2608 0.672401 CAAACCACCCGCATACGTCT 60.672 55.000 0.00 0.00 37.70 4.18
2562 2609 0.671163 TCAAACCACCCGCATACGTC 60.671 55.000 0.00 0.00 37.70 4.34
2563 2610 0.035820 ATCAAACCACCCGCATACGT 60.036 50.000 0.00 0.00 37.70 3.57
2564 2611 0.376852 CATCAAACCACCCGCATACG 59.623 55.000 0.00 0.00 39.67 3.06
2565 2612 0.738389 CCATCAAACCACCCGCATAC 59.262 55.000 0.00 0.00 0.00 2.39
2566 2613 0.329931 ACCATCAAACCACCCGCATA 59.670 50.000 0.00 0.00 0.00 3.14
2567 2614 0.541764 AACCATCAAACCACCCGCAT 60.542 50.000 0.00 0.00 0.00 4.73
2568 2615 1.152652 AACCATCAAACCACCCGCA 60.153 52.632 0.00 0.00 0.00 5.69
2569 2616 1.175983 TGAACCATCAAACCACCCGC 61.176 55.000 0.00 0.00 30.99 6.13
2570 2617 1.202114 CATGAACCATCAAACCACCCG 59.798 52.381 0.00 0.00 39.49 5.28
2571 2618 2.247358 ACATGAACCATCAAACCACCC 58.753 47.619 0.00 0.00 39.49 4.61
2572 2619 3.554752 CCAACATGAACCATCAAACCACC 60.555 47.826 0.00 0.00 39.49 4.61
2573 2620 3.320541 TCCAACATGAACCATCAAACCAC 59.679 43.478 0.00 0.00 39.49 4.16
2574 2621 3.570540 TCCAACATGAACCATCAAACCA 58.429 40.909 0.00 0.00 39.49 3.67
2575 2622 3.826157 TCTCCAACATGAACCATCAAACC 59.174 43.478 0.00 0.00 39.49 3.27
2576 2623 5.404946 CATCTCCAACATGAACCATCAAAC 58.595 41.667 0.00 0.00 39.49 2.93
2577 2624 4.082081 GCATCTCCAACATGAACCATCAAA 60.082 41.667 0.00 0.00 39.49 2.69
2578 2625 3.444742 GCATCTCCAACATGAACCATCAA 59.555 43.478 0.00 0.00 39.49 2.57
2579 2626 3.018856 GCATCTCCAACATGAACCATCA 58.981 45.455 0.00 0.00 40.57 3.07
2580 2627 2.360165 GGCATCTCCAACATGAACCATC 59.640 50.000 0.00 0.00 34.01 3.51
2581 2628 2.381911 GGCATCTCCAACATGAACCAT 58.618 47.619 0.00 0.00 34.01 3.55
2582 2629 1.616725 GGGCATCTCCAACATGAACCA 60.617 52.381 0.00 0.00 36.21 3.67
2583 2630 1.106285 GGGCATCTCCAACATGAACC 58.894 55.000 0.00 0.00 36.21 3.62
2584 2631 2.134789 AGGGCATCTCCAACATGAAC 57.865 50.000 0.00 0.00 36.21 3.18
2585 2632 2.905415 AAGGGCATCTCCAACATGAA 57.095 45.000 0.00 0.00 36.21 2.57
2586 2633 2.092429 GGTAAGGGCATCTCCAACATGA 60.092 50.000 0.00 0.00 36.21 3.07
2587 2634 2.092212 AGGTAAGGGCATCTCCAACATG 60.092 50.000 0.00 0.00 36.21 3.21
2588 2635 2.208872 AGGTAAGGGCATCTCCAACAT 58.791 47.619 0.00 0.00 36.21 2.71
2589 2636 1.668826 AGGTAAGGGCATCTCCAACA 58.331 50.000 0.00 0.00 36.21 3.33
2590 2637 2.808906 AAGGTAAGGGCATCTCCAAC 57.191 50.000 0.00 0.00 36.21 3.77
2591 2638 5.670361 ACTTATAAGGTAAGGGCATCTCCAA 59.330 40.000 16.73 0.00 36.21 3.53
2592 2639 5.224441 ACTTATAAGGTAAGGGCATCTCCA 58.776 41.667 16.73 0.00 36.21 3.86
2593 2640 5.307196 TGACTTATAAGGTAAGGGCATCTCC 59.693 44.000 16.73 0.00 0.00 3.71
2594 2641 6.224584 GTGACTTATAAGGTAAGGGCATCTC 58.775 44.000 16.73 1.60 0.00 2.75
2595 2642 5.221461 CGTGACTTATAAGGTAAGGGCATCT 60.221 44.000 16.73 0.00 0.00 2.90
2596 2643 4.989168 CGTGACTTATAAGGTAAGGGCATC 59.011 45.833 16.73 2.74 0.00 3.91
2597 2644 4.202326 CCGTGACTTATAAGGTAAGGGCAT 60.202 45.833 16.73 0.00 0.00 4.40
2598 2645 3.133362 CCGTGACTTATAAGGTAAGGGCA 59.867 47.826 16.73 0.00 0.00 5.36
2599 2646 3.133542 ACCGTGACTTATAAGGTAAGGGC 59.866 47.826 16.73 0.00 32.76 5.19
2600 2647 4.442472 CCACCGTGACTTATAAGGTAAGGG 60.442 50.000 16.73 16.12 33.30 3.95
2601 2648 4.161001 ACCACCGTGACTTATAAGGTAAGG 59.839 45.833 16.73 16.39 33.30 2.69
2602 2649 5.107133 CACCACCGTGACTTATAAGGTAAG 58.893 45.833 16.73 7.19 43.14 2.34
2603 2650 4.081531 CCACCACCGTGACTTATAAGGTAA 60.082 45.833 16.73 0.00 43.14 2.85
2604 2651 3.448301 CCACCACCGTGACTTATAAGGTA 59.552 47.826 16.73 2.41 43.14 3.08
2605 2652 2.235402 CCACCACCGTGACTTATAAGGT 59.765 50.000 16.73 2.61 43.14 3.50
2606 2653 2.235402 ACCACCACCGTGACTTATAAGG 59.765 50.000 16.73 1.96 43.14 2.69
2607 2654 3.056393 TCACCACCACCGTGACTTATAAG 60.056 47.826 11.05 11.05 43.14 1.73
2608 2655 2.898612 TCACCACCACCGTGACTTATAA 59.101 45.455 0.00 0.00 43.14 0.98
2609 2656 2.494471 CTCACCACCACCGTGACTTATA 59.506 50.000 0.00 0.00 43.14 0.98
2610 2657 1.275291 CTCACCACCACCGTGACTTAT 59.725 52.381 0.00 0.00 43.14 1.73
2611 2658 0.677288 CTCACCACCACCGTGACTTA 59.323 55.000 0.00 0.00 43.14 2.24
2612 2659 1.445942 CTCACCACCACCGTGACTT 59.554 57.895 0.00 0.00 43.14 3.01
2613 2660 3.138625 CTCACCACCACCGTGACT 58.861 61.111 0.00 0.00 43.14 3.41
2614 2661 2.665185 GCTCACCACCACCGTGAC 60.665 66.667 0.00 0.00 43.14 3.67
2615 2662 2.842462 AGCTCACCACCACCGTGA 60.842 61.111 0.00 0.00 43.14 4.35
2616 2663 2.357517 GAGCTCACCACCACCGTG 60.358 66.667 9.40 0.00 39.91 4.94
2617 2664 3.991051 CGAGCTCACCACCACCGT 61.991 66.667 15.40 0.00 0.00 4.83
2618 2665 2.543687 CTACGAGCTCACCACCACCG 62.544 65.000 15.40 0.00 0.00 4.94
2619 2666 1.215647 CTACGAGCTCACCACCACC 59.784 63.158 15.40 0.00 0.00 4.61
2620 2667 0.388649 CACTACGAGCTCACCACCAC 60.389 60.000 15.40 0.00 0.00 4.16
2621 2668 1.532604 CCACTACGAGCTCACCACCA 61.533 60.000 15.40 0.00 0.00 4.17
2622 2669 1.215647 CCACTACGAGCTCACCACC 59.784 63.158 15.40 0.00 0.00 4.61
2623 2670 0.818296 ATCCACTACGAGCTCACCAC 59.182 55.000 15.40 0.00 0.00 4.16
2624 2671 2.092592 TCTATCCACTACGAGCTCACCA 60.093 50.000 15.40 0.00 0.00 4.17
2625 2672 2.550606 CTCTATCCACTACGAGCTCACC 59.449 54.545 15.40 0.00 0.00 4.02
2626 2673 3.468770 TCTCTATCCACTACGAGCTCAC 58.531 50.000 15.40 0.00 0.00 3.51
2627 2674 3.840124 TCTCTATCCACTACGAGCTCA 57.160 47.619 15.40 0.00 0.00 4.26
2628 2675 3.438781 CCATCTCTATCCACTACGAGCTC 59.561 52.174 2.73 2.73 0.00 4.09
2629 2676 3.073209 TCCATCTCTATCCACTACGAGCT 59.927 47.826 0.00 0.00 0.00 4.09
2630 2677 3.413327 TCCATCTCTATCCACTACGAGC 58.587 50.000 0.00 0.00 0.00 5.03
2631 2678 4.006989 CCTCCATCTCTATCCACTACGAG 58.993 52.174 0.00 0.00 0.00 4.18
2632 2679 3.394940 ACCTCCATCTCTATCCACTACGA 59.605 47.826 0.00 0.00 0.00 3.43
2633 2680 3.754323 GACCTCCATCTCTATCCACTACG 59.246 52.174 0.00 0.00 0.00 3.51
2634 2681 4.083565 GGACCTCCATCTCTATCCACTAC 58.916 52.174 0.00 0.00 35.64 2.73
2635 2682 3.990933 AGGACCTCCATCTCTATCCACTA 59.009 47.826 0.00 0.00 38.89 2.74
2636 2683 2.794760 AGGACCTCCATCTCTATCCACT 59.205 50.000 0.00 0.00 38.89 4.00
2637 2684 3.252554 AGGACCTCCATCTCTATCCAC 57.747 52.381 0.00 0.00 38.89 4.02
2638 2685 5.584913 GATTAGGACCTCCATCTCTATCCA 58.415 45.833 0.00 0.00 38.89 3.41
2639 2686 4.642885 CGATTAGGACCTCCATCTCTATCC 59.357 50.000 0.00 0.00 38.89 2.59
2640 2687 4.642885 CCGATTAGGACCTCCATCTCTATC 59.357 50.000 0.00 0.00 45.00 2.08
2641 2688 4.570933 CCCGATTAGGACCTCCATCTCTAT 60.571 50.000 0.00 0.00 45.00 1.98
2642 2689 3.245300 CCCGATTAGGACCTCCATCTCTA 60.245 52.174 0.00 0.00 45.00 2.43
2643 2690 2.491825 CCCGATTAGGACCTCCATCTCT 60.492 54.545 0.00 0.00 45.00 3.10
2644 2691 1.896465 CCCGATTAGGACCTCCATCTC 59.104 57.143 0.00 0.00 45.00 2.75
2645 2692 1.503784 TCCCGATTAGGACCTCCATCT 59.496 52.381 0.00 0.00 45.00 2.90
2646 2693 2.011122 TCCCGATTAGGACCTCCATC 57.989 55.000 0.00 0.00 45.00 3.51
2647 2694 2.723530 ATCCCGATTAGGACCTCCAT 57.276 50.000 0.00 0.00 45.00 3.41
2648 2695 2.720254 TCTATCCCGATTAGGACCTCCA 59.280 50.000 0.00 0.00 45.00 3.86
2649 2696 3.358118 CTCTATCCCGATTAGGACCTCC 58.642 54.545 0.00 0.00 45.00 4.30
2650 2697 2.756207 GCTCTATCCCGATTAGGACCTC 59.244 54.545 0.00 0.00 45.00 3.85
2651 2698 2.110188 TGCTCTATCCCGATTAGGACCT 59.890 50.000 0.00 0.00 45.00 3.85
2652 2699 2.231721 GTGCTCTATCCCGATTAGGACC 59.768 54.545 0.00 0.00 45.00 4.46
2653 2700 2.891580 TGTGCTCTATCCCGATTAGGAC 59.108 50.000 0.00 0.00 45.00 3.85
2654 2701 3.238788 TGTGCTCTATCCCGATTAGGA 57.761 47.619 0.00 0.00 45.00 2.94
2655 2702 3.555168 GGTTGTGCTCTATCCCGATTAGG 60.555 52.174 0.00 0.00 40.63 2.69
2656 2703 3.555168 GGGTTGTGCTCTATCCCGATTAG 60.555 52.174 0.00 0.00 0.00 1.73
2657 2704 2.367567 GGGTTGTGCTCTATCCCGATTA 59.632 50.000 0.00 0.00 0.00 1.75
2658 2705 1.141053 GGGTTGTGCTCTATCCCGATT 59.859 52.381 0.00 0.00 0.00 3.34
2659 2706 0.759346 GGGTTGTGCTCTATCCCGAT 59.241 55.000 0.00 0.00 0.00 4.18
2660 2707 0.325296 AGGGTTGTGCTCTATCCCGA 60.325 55.000 0.00 0.00 42.57 5.14
2661 2708 0.179073 CAGGGTTGTGCTCTATCCCG 60.179 60.000 0.00 0.00 42.57 5.14
2662 2709 0.181350 CCAGGGTTGTGCTCTATCCC 59.819 60.000 0.00 1.48 38.50 3.85
2663 2710 0.912486 ACCAGGGTTGTGCTCTATCC 59.088 55.000 0.00 0.00 0.00 2.59
2664 2711 1.555075 TCACCAGGGTTGTGCTCTATC 59.445 52.381 0.00 0.00 33.71 2.08
2665 2712 1.279271 GTCACCAGGGTTGTGCTCTAT 59.721 52.381 0.00 0.00 33.71 1.98
2666 2713 0.685097 GTCACCAGGGTTGTGCTCTA 59.315 55.000 0.00 0.00 33.71 2.43
2667 2714 1.056700 AGTCACCAGGGTTGTGCTCT 61.057 55.000 0.00 0.00 33.71 4.09
2668 2715 0.886490 CAGTCACCAGGGTTGTGCTC 60.886 60.000 0.00 0.00 33.71 4.26
2669 2716 1.149174 CAGTCACCAGGGTTGTGCT 59.851 57.895 0.00 0.00 33.71 4.40
2670 2717 0.751643 AACAGTCACCAGGGTTGTGC 60.752 55.000 0.00 0.00 33.71 4.57
2671 2718 1.134098 AGAACAGTCACCAGGGTTGTG 60.134 52.381 0.00 0.00 35.01 3.33
2672 2719 1.141053 GAGAACAGTCACCAGGGTTGT 59.859 52.381 0.00 0.00 0.00 3.32
2673 2720 1.873903 CGAGAACAGTCACCAGGGTTG 60.874 57.143 0.00 0.00 0.00 3.77
2674 2721 0.393077 CGAGAACAGTCACCAGGGTT 59.607 55.000 0.00 0.00 0.00 4.11
2675 2722 1.472662 CCGAGAACAGTCACCAGGGT 61.473 60.000 0.00 0.00 0.00 4.34
2676 2723 1.293498 CCGAGAACAGTCACCAGGG 59.707 63.158 0.00 0.00 0.00 4.45
2677 2724 1.374758 GCCGAGAACAGTCACCAGG 60.375 63.158 0.00 0.00 0.00 4.45
2678 2725 4.268687 GCCGAGAACAGTCACCAG 57.731 61.111 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.