Multiple sequence alignment - TraesCS5A01G458700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G458700 chr5A 100.000 3894 0 0 1 3894 639075655 639079548 0.000000e+00 7191.0
1 TraesCS5A01G458700 chr5D 93.720 1465 62 21 1655 3109 510834350 510835794 0.000000e+00 2169.0
2 TraesCS5A01G458700 chr5D 91.413 757 42 6 795 1542 510833609 510834351 0.000000e+00 1016.0
3 TraesCS5A01G458700 chr5D 86.760 642 42 21 17 651 510832763 510833368 0.000000e+00 675.0
4 TraesCS5A01G458700 chr5B 92.819 1518 76 23 1655 3154 641799418 641800920 0.000000e+00 2169.0
5 TraesCS5A01G458700 chr5B 92.657 858 44 6 691 1545 641798582 641799423 0.000000e+00 1218.0
6 TraesCS5A01G458700 chr5B 88.808 411 26 13 240 644 641797811 641798207 1.630000e-133 486.0
7 TraesCS5A01G458700 chr5B 90.909 121 7 1 37 157 641797283 641797399 4.030000e-35 159.0
8 TraesCS5A01G458700 chr5B 92.105 76 6 0 646 721 641798506 641798581 1.480000e-19 108.0
9 TraesCS5A01G458700 chr6B 79.924 523 71 19 3393 3885 529876718 529877236 1.720000e-93 353.0
10 TraesCS5A01G458700 chr4D 82.968 411 48 14 3398 3795 388921545 388921946 6.190000e-93 351.0
11 TraesCS5A01G458700 chr7D 82.793 401 57 10 3393 3782 159709500 159709899 8.010000e-92 348.0
12 TraesCS5A01G458700 chr7D 72.365 351 74 19 1891 2234 561954069 561954403 5.360000e-14 89.8
13 TraesCS5A01G458700 chr3B 83.077 390 52 7 3396 3781 558089542 558089921 3.730000e-90 342.0
14 TraesCS5A01G458700 chr6A 81.931 404 60 9 3396 3795 569430018 569430412 2.900000e-86 329.0
15 TraesCS5A01G458700 chr6A 85.496 131 8 1 1543 1662 593283523 593283653 4.080000e-25 126.0
16 TraesCS5A01G458700 chr3A 81.683 404 60 12 3401 3795 9048770 9049168 1.350000e-84 324.0
17 TraesCS5A01G458700 chr3A 90.278 72 7 0 1545 1616 741749311 741749240 1.150000e-15 95.3
18 TraesCS5A01G458700 chr3A 89.831 59 6 0 1544 1602 172756224 172756282 4.170000e-10 76.8
19 TraesCS5A01G458700 chr2D 81.043 422 59 17 3390 3795 625193431 625193847 2.260000e-82 316.0
20 TraesCS5A01G458700 chr4A 79.287 449 66 16 3425 3849 632207590 632208035 4.920000e-74 289.0
21 TraesCS5A01G458700 chr4A 83.193 119 9 1 1551 1658 53341640 53341758 8.900000e-17 99.0
22 TraesCS5A01G458700 chr1A 80.274 365 59 8 3425 3782 540293777 540293419 2.980000e-66 263.0
23 TraesCS5A01G458700 chr7A 84.167 120 8 1 1546 1654 90659888 90660007 5.320000e-19 106.0
24 TraesCS5A01G458700 chr7B 89.655 58 6 0 2177 2234 611554456 611554399 1.500000e-09 75.0
25 TraesCS5A01G458700 chr4B 89.362 47 5 0 1552 1598 28410657 28410703 4.200000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G458700 chr5A 639075655 639079548 3893 False 7191.000000 7191 100.0000 1 3894 1 chr5A.!!$F1 3893
1 TraesCS5A01G458700 chr5D 510832763 510835794 3031 False 1286.666667 2169 90.6310 17 3109 3 chr5D.!!$F1 3092
2 TraesCS5A01G458700 chr5B 641797283 641800920 3637 False 828.000000 2169 91.4596 37 3154 5 chr5B.!!$F1 3117
3 TraesCS5A01G458700 chr6B 529876718 529877236 518 False 353.000000 353 79.9240 3393 3885 1 chr6B.!!$F1 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
907 1702 0.178964 TCTTCCACAAAAGCCAGGGG 60.179 55.0 0.00 0.00 0.0 4.79 F
2330 3127 0.823460 TGCTCCATCTGATGTACGCA 59.177 50.0 15.95 16.29 0.0 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2351 3148 0.034756 TCTGCAACAGCCACGTACAT 59.965 50.0 0.0 0.0 0.00 2.29 R
3311 4127 0.031994 CAAGTTTCAAACCGCCAGGG 59.968 55.0 0.0 0.0 43.47 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 3.190849 CACCAGAGCGTGCGATGG 61.191 66.667 14.35 14.35 38.83 3.51
87 88 3.381983 ACCAGAGCGTGCGATGGA 61.382 61.111 20.48 0.00 36.62 3.41
88 89 2.107750 CCAGAGCGTGCGATGGAT 59.892 61.111 11.51 0.00 34.60 3.41
89 90 2.242572 CCAGAGCGTGCGATGGATG 61.243 63.158 11.51 0.00 34.60 3.51
92 93 2.436469 AGCGTGCGATGGATGCAA 60.436 55.556 5.33 0.00 45.23 4.08
157 158 1.819928 TCAATCAACCCACCACATCG 58.180 50.000 0.00 0.00 0.00 3.84
166 520 3.541632 ACCCACCACATCGTATCATTTC 58.458 45.455 0.00 0.00 0.00 2.17
178 535 3.061403 CGTATCATTTCGCAACCGAGTAC 60.061 47.826 0.00 0.00 45.35 2.73
179 536 2.736144 TCATTTCGCAACCGAGTACT 57.264 45.000 0.00 0.00 45.35 2.73
180 537 3.853831 TCATTTCGCAACCGAGTACTA 57.146 42.857 0.00 0.00 45.35 1.82
188 545 2.476854 GCAACCGAGTACTAGTACACCG 60.477 54.545 29.87 28.21 38.48 4.94
190 547 0.659957 CCGAGTACTAGTACACCGGC 59.340 60.000 33.65 19.17 42.63 6.13
193 550 2.421424 CGAGTACTAGTACACCGGCTTT 59.579 50.000 29.87 10.73 38.48 3.51
198 555 4.879197 ACTAGTACACCGGCTTTACTTT 57.121 40.909 13.72 2.04 0.00 2.66
201 558 3.660865 AGTACACCGGCTTTACTTTCAG 58.339 45.455 0.00 0.00 0.00 3.02
208 565 3.561725 CCGGCTTTACTTTCAGATGATCC 59.438 47.826 0.00 0.00 0.00 3.36
211 568 5.463724 CGGCTTTACTTTCAGATGATCCTAC 59.536 44.000 0.00 0.00 0.00 3.18
212 569 5.463724 GGCTTTACTTTCAGATGATCCTACG 59.536 44.000 0.00 0.00 0.00 3.51
213 570 6.043411 GCTTTACTTTCAGATGATCCTACGT 58.957 40.000 0.00 0.00 0.00 3.57
226 583 6.373186 TGATCCTACGTAGTAACATGACAG 57.627 41.667 20.73 2.17 45.13 3.51
228 585 5.556355 TCCTACGTAGTAACATGACAGTG 57.444 43.478 20.73 1.48 45.13 3.66
233 590 5.672629 ACGTAGTAACATGACAGTGCATGC 61.673 45.833 20.50 11.82 44.54 4.06
241 598 1.015109 GACAGTGCATGCCATCTGAG 58.985 55.000 28.45 12.88 0.00 3.35
254 611 1.738350 CATCTGAGCTGCCTTGTCAAG 59.262 52.381 5.53 5.53 0.00 3.02
258 615 1.152902 AGCTGCCTTGTCAAGCACA 60.153 52.632 7.09 6.70 34.68 4.57
285 648 7.382898 AGTGTCCTCTGAAGAAAATTACTCTC 58.617 38.462 0.00 0.00 0.00 3.20
287 650 7.544217 GTGTCCTCTGAAGAAAATTACTCTCTC 59.456 40.741 0.00 0.00 0.00 3.20
289 652 8.091449 GTCCTCTGAAGAAAATTACTCTCTCAA 58.909 37.037 0.00 0.00 0.00 3.02
290 653 8.310382 TCCTCTGAAGAAAATTACTCTCTCAAG 58.690 37.037 0.00 0.00 0.00 3.02
291 654 8.093927 CCTCTGAAGAAAATTACTCTCTCAAGT 58.906 37.037 0.00 0.00 0.00 3.16
292 655 9.139174 CTCTGAAGAAAATTACTCTCTCAAGTC 57.861 37.037 0.00 0.00 0.00 3.01
295 658 7.382488 TGAAGAAAATTACTCTCTCAAGTCGTG 59.618 37.037 0.00 0.00 0.00 4.35
296 659 6.750148 AGAAAATTACTCTCTCAAGTCGTGT 58.250 36.000 0.00 0.00 0.00 4.49
297 660 7.210873 AGAAAATTACTCTCTCAAGTCGTGTT 58.789 34.615 0.00 0.00 0.00 3.32
299 662 7.870588 AAATTACTCTCTCAAGTCGTGTTAC 57.129 36.000 0.00 0.00 0.00 2.50
301 664 4.491234 ACTCTCTCAAGTCGTGTTACTG 57.509 45.455 0.00 0.00 0.00 2.74
302 665 4.135306 ACTCTCTCAAGTCGTGTTACTGA 58.865 43.478 0.00 0.00 0.00 3.41
303 666 4.762765 ACTCTCTCAAGTCGTGTTACTGAT 59.237 41.667 0.00 0.00 0.00 2.90
304 667 5.048153 TCTCTCAAGTCGTGTTACTGATG 57.952 43.478 0.00 0.00 0.00 3.07
305 668 3.575630 TCTCAAGTCGTGTTACTGATGC 58.424 45.455 0.00 0.00 0.00 3.91
306 669 3.255888 TCTCAAGTCGTGTTACTGATGCT 59.744 43.478 0.00 0.00 0.00 3.79
307 670 4.457949 TCTCAAGTCGTGTTACTGATGCTA 59.542 41.667 0.00 0.00 0.00 3.49
308 671 4.482386 TCAAGTCGTGTTACTGATGCTAC 58.518 43.478 0.00 0.00 0.00 3.58
322 685 0.249280 TGCTACAGTCACCGTGTGTG 60.249 55.000 5.29 3.84 46.88 3.82
335 698 1.097547 GTGTGTGCTGTTGAGCTGGT 61.098 55.000 0.00 0.00 46.39 4.00
449 815 7.309438 GGAGATTTTAATTTCAAGGACAGTGCT 60.309 37.037 0.00 0.00 0.00 4.40
450 816 7.373493 AGATTTTAATTTCAAGGACAGTGCTG 58.627 34.615 0.00 0.00 0.00 4.41
498 864 1.831389 CTGCAGTACACACACGGCAC 61.831 60.000 5.25 0.00 43.27 5.01
526 895 0.249489 AATGCGCGGGAAGCTAGTAG 60.249 55.000 8.83 0.00 45.59 2.57
527 896 1.107538 ATGCGCGGGAAGCTAGTAGA 61.108 55.000 8.83 0.00 45.59 2.59
528 897 1.317431 TGCGCGGGAAGCTAGTAGAA 61.317 55.000 8.83 0.00 45.59 2.10
588 957 0.610174 TCTGATTCCTGCGCTTCAGT 59.390 50.000 9.73 0.00 41.25 3.41
595 964 0.814457 CCTGCGCTTCAGTAGAGACT 59.186 55.000 9.73 0.00 41.25 3.24
632 1004 3.186702 TGAAAGTCGTGGTTCATCACA 57.813 42.857 0.00 0.00 37.50 3.58
660 1329 7.283127 TGTTGCCATCATACTTCTTAAGATTCC 59.717 37.037 5.89 0.00 0.00 3.01
666 1335 9.708222 CATCATACTTCTTAAGATTCCAAAACG 57.292 33.333 5.89 0.00 0.00 3.60
730 1433 0.466922 AGCAAACTCCAGCAGCACTT 60.467 50.000 0.00 0.00 0.00 3.16
734 1437 1.602311 AACTCCAGCAGCACTTCTTG 58.398 50.000 0.00 0.00 0.00 3.02
764 1467 4.748102 TCTGTTTCATTCCTGAACGTGTAC 59.252 41.667 0.00 0.00 41.05 2.90
765 1468 3.491639 TGTTTCATTCCTGAACGTGTACG 59.508 43.478 2.43 2.43 41.05 3.67
770 1473 3.646611 TTCCTGAACGTGTACGATGAA 57.353 42.857 11.79 3.70 43.02 2.57
778 1481 5.517411 TGAACGTGTACGATGAATATTGGTC 59.483 40.000 11.79 0.00 43.02 4.02
781 1484 6.046593 ACGTGTACGATGAATATTGGTCAAT 58.953 36.000 11.79 1.65 43.02 2.57
852 1639 3.699538 GGGGTGGATCTGTAATTTCCAAC 59.300 47.826 2.96 2.96 44.86 3.77
874 1661 2.164624 AGTATCGAGGTTCTCTGTGCAC 59.835 50.000 10.75 10.75 0.00 4.57
905 1700 2.276732 TCTCTTCCACAAAAGCCAGG 57.723 50.000 0.00 0.00 0.00 4.45
906 1701 1.202927 TCTCTTCCACAAAAGCCAGGG 60.203 52.381 0.00 0.00 0.00 4.45
907 1702 0.178964 TCTTCCACAAAAGCCAGGGG 60.179 55.000 0.00 0.00 0.00 4.79
908 1703 1.152355 TTCCACAAAAGCCAGGGGG 60.152 57.895 0.00 0.00 37.18 5.40
1198 1994 2.125912 CTTGCACCGGTCTCCTCG 60.126 66.667 2.59 0.00 0.00 4.63
1239 2035 2.224769 CCTGTCTTTCTTGCCACCCTTA 60.225 50.000 0.00 0.00 0.00 2.69
1251 2047 2.038295 GCCACCCTTATCTCTGGATCTG 59.962 54.545 0.00 0.00 33.71 2.90
1252 2048 3.312890 CCACCCTTATCTCTGGATCTGT 58.687 50.000 0.00 0.00 33.71 3.41
1253 2049 3.713764 CCACCCTTATCTCTGGATCTGTT 59.286 47.826 0.00 0.00 33.71 3.16
1297 2093 2.717580 TCGGTACAACACTGCTACAG 57.282 50.000 0.00 0.00 37.52 2.74
1305 2101 2.519377 ACACTGCTACAGCGTTTACA 57.481 45.000 0.00 0.00 45.83 2.41
1306 2102 3.040147 ACACTGCTACAGCGTTTACAT 57.960 42.857 0.00 0.00 45.83 2.29
1486 2282 3.019564 GGATTCTTCCCCAGATTGTGTG 58.980 50.000 0.00 0.00 35.84 3.82
1548 2344 5.382664 TTTTCCTTTGTCTGGGAAGTACT 57.617 39.130 0.00 0.00 41.78 2.73
1549 2345 4.618920 TTCCTTTGTCTGGGAAGTACTC 57.381 45.455 0.00 0.00 36.78 2.59
1550 2346 2.904434 TCCTTTGTCTGGGAAGTACTCC 59.096 50.000 0.00 0.00 44.54 3.85
1560 2356 1.477295 GGAAGTACTCCCTCTGTTCCG 59.523 57.143 0.00 0.00 38.44 4.30
1561 2357 2.444421 GAAGTACTCCCTCTGTTCCGA 58.556 52.381 0.00 0.00 0.00 4.55
1562 2358 2.599408 AGTACTCCCTCTGTTCCGAA 57.401 50.000 0.00 0.00 0.00 4.30
1563 2359 3.103080 AGTACTCCCTCTGTTCCGAAT 57.897 47.619 0.00 0.00 0.00 3.34
1564 2360 3.442076 AGTACTCCCTCTGTTCCGAATT 58.558 45.455 0.00 0.00 0.00 2.17
1565 2361 4.607239 AGTACTCCCTCTGTTCCGAATTA 58.393 43.478 0.00 0.00 0.00 1.40
1566 2362 5.209659 AGTACTCCCTCTGTTCCGAATTAT 58.790 41.667 0.00 0.00 0.00 1.28
1567 2363 5.661759 AGTACTCCCTCTGTTCCGAATTATT 59.338 40.000 0.00 0.00 0.00 1.40
1568 2364 5.437191 ACTCCCTCTGTTCCGAATTATTT 57.563 39.130 0.00 0.00 0.00 1.40
1569 2365 5.186198 ACTCCCTCTGTTCCGAATTATTTG 58.814 41.667 0.00 0.00 0.00 2.32
1570 2366 5.174037 TCCCTCTGTTCCGAATTATTTGT 57.826 39.130 0.00 0.00 0.00 2.83
1571 2367 5.566469 TCCCTCTGTTCCGAATTATTTGTT 58.434 37.500 0.00 0.00 0.00 2.83
1572 2368 6.007703 TCCCTCTGTTCCGAATTATTTGTTT 58.992 36.000 0.00 0.00 0.00 2.83
1573 2369 6.492087 TCCCTCTGTTCCGAATTATTTGTTTT 59.508 34.615 0.00 0.00 0.00 2.43
1574 2370 7.666388 TCCCTCTGTTCCGAATTATTTGTTTTA 59.334 33.333 0.00 0.00 0.00 1.52
1575 2371 7.968405 CCCTCTGTTCCGAATTATTTGTTTTAG 59.032 37.037 0.00 0.00 0.00 1.85
1576 2372 8.726988 CCTCTGTTCCGAATTATTTGTTTTAGA 58.273 33.333 0.00 0.00 0.00 2.10
1616 2412 9.631452 TGAGATATCTAGCATTAAAATGAGTCG 57.369 33.333 4.89 0.00 38.70 4.18
1617 2413 9.632807 GAGATATCTAGCATTAAAATGAGTCGT 57.367 33.333 4.89 0.00 38.70 4.34
1625 2421 8.804688 AGCATTAAAATGAGTCGTATCTAGAC 57.195 34.615 6.87 0.00 38.70 2.59
1626 2422 8.414003 AGCATTAAAATGAGTCGTATCTAGACA 58.586 33.333 6.87 0.00 38.70 3.41
1627 2423 9.031360 GCATTAAAATGAGTCGTATCTAGACAA 57.969 33.333 6.87 0.00 38.70 3.18
1631 2427 8.649973 AAAATGAGTCGTATCTAGACAAATCC 57.350 34.615 0.00 0.00 40.84 3.01
1632 2428 6.961360 ATGAGTCGTATCTAGACAAATCCA 57.039 37.500 0.00 0.00 40.84 3.41
1633 2429 6.769134 TGAGTCGTATCTAGACAAATCCAA 57.231 37.500 0.00 0.00 40.84 3.53
1634 2430 6.796426 TGAGTCGTATCTAGACAAATCCAAG 58.204 40.000 0.00 0.00 40.84 3.61
1635 2431 6.602009 TGAGTCGTATCTAGACAAATCCAAGA 59.398 38.462 0.00 0.00 40.84 3.02
1636 2432 7.033530 AGTCGTATCTAGACAAATCCAAGAG 57.966 40.000 0.00 0.00 40.84 2.85
1637 2433 6.829298 AGTCGTATCTAGACAAATCCAAGAGA 59.171 38.462 0.00 0.00 40.84 3.10
1638 2434 7.339721 AGTCGTATCTAGACAAATCCAAGAGAA 59.660 37.037 0.00 0.00 40.84 2.87
1639 2435 7.646130 GTCGTATCTAGACAAATCCAAGAGAAG 59.354 40.741 0.00 0.00 38.42 2.85
1640 2436 7.339721 TCGTATCTAGACAAATCCAAGAGAAGT 59.660 37.037 0.00 0.00 0.00 3.01
1641 2437 8.622157 CGTATCTAGACAAATCCAAGAGAAGTA 58.378 37.037 0.00 0.00 0.00 2.24
1645 2441 9.877178 TCTAGACAAATCCAAGAGAAGTAATTC 57.123 33.333 0.00 0.00 0.00 2.17
1646 2442 9.658799 CTAGACAAATCCAAGAGAAGTAATTCA 57.341 33.333 5.62 0.00 0.00 2.57
1647 2443 8.558973 AGACAAATCCAAGAGAAGTAATTCAG 57.441 34.615 5.62 0.00 0.00 3.02
1648 2444 8.378565 AGACAAATCCAAGAGAAGTAATTCAGA 58.621 33.333 5.62 0.00 0.00 3.27
1649 2445 8.924511 ACAAATCCAAGAGAAGTAATTCAGAA 57.075 30.769 5.62 0.00 0.00 3.02
1650 2446 8.787852 ACAAATCCAAGAGAAGTAATTCAGAAC 58.212 33.333 5.62 0.00 0.00 3.01
1651 2447 7.602517 AATCCAAGAGAAGTAATTCAGAACG 57.397 36.000 5.62 0.00 0.00 3.95
1652 2448 5.479306 TCCAAGAGAAGTAATTCAGAACGG 58.521 41.667 5.62 0.00 0.00 4.44
1653 2449 5.245301 TCCAAGAGAAGTAATTCAGAACGGA 59.755 40.000 5.62 1.88 0.00 4.69
1654 2450 5.578727 CCAAGAGAAGTAATTCAGAACGGAG 59.421 44.000 5.62 0.00 0.00 4.63
1655 2451 5.331876 AGAGAAGTAATTCAGAACGGAGG 57.668 43.478 5.62 0.00 0.00 4.30
1656 2452 4.160626 AGAGAAGTAATTCAGAACGGAGGG 59.839 45.833 5.62 0.00 0.00 4.30
1657 2453 4.094476 AGAAGTAATTCAGAACGGAGGGA 58.906 43.478 5.62 0.00 0.00 4.20
1658 2454 4.160626 AGAAGTAATTCAGAACGGAGGGAG 59.839 45.833 5.62 0.00 0.00 4.30
1659 2455 3.442076 AGTAATTCAGAACGGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
1700 2496 1.880646 CGGGGACATTTCGTTTCAGGT 60.881 52.381 0.00 0.00 0.00 4.00
1707 2503 5.064834 GGACATTTCGTTTCAGGTTATCTCC 59.935 44.000 0.00 0.00 0.00 3.71
1748 2545 8.112099 CGAAAAGAAGCGCTAGTAGTAATTTA 57.888 34.615 12.05 0.00 0.00 1.40
1759 2556 9.052759 CGCTAGTAGTAATTTATTTTGGGTGAT 57.947 33.333 0.00 0.00 0.00 3.06
2071 2868 3.519930 GTCTCCCCGTCGCTCTCC 61.520 72.222 0.00 0.00 0.00 3.71
2309 3106 3.315765 TCGCCTCCACGAAAATGTT 57.684 47.368 0.00 0.00 39.54 2.71
2311 3108 1.156736 CGCCTCCACGAAAATGTTCT 58.843 50.000 0.00 0.00 34.06 3.01
2313 3110 1.401539 GCCTCCACGAAAATGTTCTGC 60.402 52.381 0.00 0.00 0.00 4.26
2314 3111 2.154462 CCTCCACGAAAATGTTCTGCT 58.846 47.619 0.00 0.00 0.00 4.24
2315 3112 2.160417 CCTCCACGAAAATGTTCTGCTC 59.840 50.000 0.00 0.00 0.00 4.26
2316 3113 2.151202 TCCACGAAAATGTTCTGCTCC 58.849 47.619 0.00 0.00 0.00 4.70
2317 3114 1.879380 CCACGAAAATGTTCTGCTCCA 59.121 47.619 0.00 0.00 0.00 3.86
2320 3117 3.438087 CACGAAAATGTTCTGCTCCATCT 59.562 43.478 0.00 0.00 0.00 2.90
2321 3118 3.438087 ACGAAAATGTTCTGCTCCATCTG 59.562 43.478 0.00 0.00 0.00 2.90
2322 3119 3.686241 CGAAAATGTTCTGCTCCATCTGA 59.314 43.478 0.00 0.00 0.00 3.27
2323 3120 4.334759 CGAAAATGTTCTGCTCCATCTGAT 59.665 41.667 0.00 0.00 0.00 2.90
2326 3123 5.363562 AATGTTCTGCTCCATCTGATGTA 57.636 39.130 15.95 0.00 0.00 2.29
2327 3124 4.128925 TGTTCTGCTCCATCTGATGTAC 57.871 45.455 15.95 5.98 0.00 2.90
2328 3125 3.119291 GTTCTGCTCCATCTGATGTACG 58.881 50.000 15.95 5.51 0.00 3.67
2329 3126 1.067669 TCTGCTCCATCTGATGTACGC 59.932 52.381 15.95 14.23 0.00 4.42
2330 3127 0.823460 TGCTCCATCTGATGTACGCA 59.177 50.000 15.95 16.29 0.00 5.24
2333 3130 2.739932 GCTCCATCTGATGTACGCAGTT 60.740 50.000 15.95 4.86 37.78 3.16
2335 3132 1.328680 CCATCTGATGTACGCAGTTGC 59.671 52.381 15.95 0.00 37.78 4.17
2345 3142 1.510623 CGCAGTTGCTTGACGATGC 60.511 57.895 2.29 0.00 39.32 3.91
2346 3143 1.154150 GCAGTTGCTTGACGATGCC 60.154 57.895 0.00 0.00 38.21 4.40
2351 3148 1.199789 GTTGCTTGACGATGCCATTGA 59.800 47.619 0.00 0.00 0.00 2.57
2355 3152 2.613595 GCTTGACGATGCCATTGATGTA 59.386 45.455 0.00 0.00 0.00 2.29
2356 3153 3.546815 GCTTGACGATGCCATTGATGTAC 60.547 47.826 0.00 0.00 0.00 2.90
2357 3154 2.200899 TGACGATGCCATTGATGTACG 58.799 47.619 0.00 0.00 0.00 3.67
2358 3155 2.201732 GACGATGCCATTGATGTACGT 58.798 47.619 0.00 0.00 35.53 3.57
2359 3156 1.933181 ACGATGCCATTGATGTACGTG 59.067 47.619 0.00 0.00 0.00 4.49
2360 3157 1.261354 CGATGCCATTGATGTACGTGG 59.739 52.381 0.00 0.00 34.84 4.94
2364 3161 1.737838 CCATTGATGTACGTGGCTGT 58.262 50.000 0.00 0.00 0.00 4.40
2392 3189 0.389948 ACCTGATCAAGAACGACGGC 60.390 55.000 0.00 0.00 0.00 5.68
2425 3222 0.508641 CGCAGGTGTTCAAGAACTCG 59.491 55.000 13.49 6.25 41.67 4.18
2431 3228 1.859080 GTGTTCAAGAACTCGAGCGTT 59.141 47.619 13.61 0.00 41.67 4.84
2876 3673 0.532573 GCTCGACCAGGTCAAGATCA 59.467 55.000 20.13 0.00 32.09 2.92
2896 3693 1.587613 GCCGCTCAAGCTCTAGTCG 60.588 63.158 0.00 0.00 39.32 4.18
2947 3750 2.395690 CTGTCGCGTTGATTCGGC 59.604 61.111 5.77 0.00 0.00 5.54
2954 3757 1.636340 CGTTGATTCGGCATCGTCC 59.364 57.895 0.00 0.00 34.08 4.79
2964 3767 0.308376 GGCATCGTCCTCTCGTCTAC 59.692 60.000 0.00 0.00 0.00 2.59
2965 3768 1.301423 GCATCGTCCTCTCGTCTACT 58.699 55.000 0.00 0.00 0.00 2.57
2966 3769 2.481854 GCATCGTCCTCTCGTCTACTA 58.518 52.381 0.00 0.00 0.00 1.82
2967 3770 3.068560 GCATCGTCCTCTCGTCTACTAT 58.931 50.000 0.00 0.00 0.00 2.12
2968 3771 3.120477 GCATCGTCCTCTCGTCTACTATG 60.120 52.174 0.00 0.00 0.00 2.23
2969 3772 3.815856 TCGTCCTCTCGTCTACTATGT 57.184 47.619 0.00 0.00 0.00 2.29
2970 3773 4.926140 TCGTCCTCTCGTCTACTATGTA 57.074 45.455 0.00 0.00 0.00 2.29
3001 3808 6.945435 AGTGGGTATGTAATTTGTGACATTGA 59.055 34.615 0.00 0.00 37.47 2.57
3065 3879 2.109538 CTGTGCTGTGCGTGAACCTG 62.110 60.000 0.00 0.00 0.00 4.00
3066 3880 3.279116 TGCTGTGCGTGAACCTGC 61.279 61.111 0.00 0.00 0.00 4.85
3067 3881 4.374702 GCTGTGCGTGAACCTGCG 62.375 66.667 0.00 0.00 0.00 5.18
3068 3882 2.661537 CTGTGCGTGAACCTGCGA 60.662 61.111 0.00 0.00 0.00 5.10
3069 3883 2.661537 TGTGCGTGAACCTGCGAG 60.662 61.111 0.00 0.00 0.00 5.03
3070 3884 4.077188 GTGCGTGAACCTGCGAGC 62.077 66.667 0.00 0.00 0.00 5.03
3071 3885 4.299547 TGCGTGAACCTGCGAGCT 62.300 61.111 0.00 0.00 0.00 4.09
3072 3886 3.482783 GCGTGAACCTGCGAGCTC 61.483 66.667 2.73 2.73 0.00 4.09
3074 3888 2.811317 GTGAACCTGCGAGCTCCG 60.811 66.667 8.47 4.62 42.21 4.63
3115 3931 6.461110 TGCGTAGGCTTTCTACTAGTATTT 57.539 37.500 9.11 0.00 44.66 1.40
3140 3956 3.362281 TGATTTTGTAATGACGACGCG 57.638 42.857 3.53 3.53 0.00 6.01
3154 3970 1.548973 GACGCGTCCACTGTTCACTG 61.549 60.000 28.61 0.00 0.00 3.66
3155 3971 2.939022 GCGTCCACTGTTCACTGC 59.061 61.111 0.00 0.00 0.00 4.40
3156 3972 2.943345 GCGTCCACTGTTCACTGCG 61.943 63.158 0.00 0.00 0.00 5.18
3157 3973 2.939022 GTCCACTGTTCACTGCGC 59.061 61.111 0.00 0.00 0.00 6.09
3158 3974 1.887242 GTCCACTGTTCACTGCGCA 60.887 57.895 10.98 10.98 0.00 6.09
3159 3975 1.887242 TCCACTGTTCACTGCGCAC 60.887 57.895 5.66 0.00 0.00 5.34
3160 3976 2.246397 CACTGTTCACTGCGCACG 59.754 61.111 5.66 5.54 0.00 5.34
3161 3977 2.202878 ACTGTTCACTGCGCACGT 60.203 55.556 5.66 6.30 0.00 4.49
3162 3978 1.066752 ACTGTTCACTGCGCACGTA 59.933 52.632 5.66 0.00 0.00 3.57
3163 3979 0.528901 ACTGTTCACTGCGCACGTAA 60.529 50.000 5.66 0.00 0.00 3.18
3164 3980 0.111266 CTGTTCACTGCGCACGTAAC 60.111 55.000 5.66 11.42 0.00 2.50
3165 3981 1.203313 GTTCACTGCGCACGTAACC 59.797 57.895 5.66 0.00 0.00 2.85
3166 3982 2.304401 TTCACTGCGCACGTAACCG 61.304 57.895 5.66 0.00 40.83 4.44
3167 3983 2.680693 TTCACTGCGCACGTAACCGA 62.681 55.000 5.66 0.00 37.88 4.69
3168 3984 2.732094 ACTGCGCACGTAACCGAC 60.732 61.111 5.66 0.11 37.88 4.79
3179 3995 2.998668 GTAACCGACGAATCATGCAG 57.001 50.000 0.00 0.00 0.00 4.41
3180 3996 2.268298 GTAACCGACGAATCATGCAGT 58.732 47.619 0.00 0.00 0.00 4.40
3181 3997 1.808411 AACCGACGAATCATGCAGTT 58.192 45.000 0.00 0.00 0.00 3.16
3182 3998 1.808411 ACCGACGAATCATGCAGTTT 58.192 45.000 0.00 0.00 0.00 2.66
3183 3999 1.464608 ACCGACGAATCATGCAGTTTG 59.535 47.619 0.00 0.00 0.00 2.93
3184 4000 1.202065 CCGACGAATCATGCAGTTTGG 60.202 52.381 0.00 0.00 0.00 3.28
3185 4001 1.464608 CGACGAATCATGCAGTTTGGT 59.535 47.619 0.00 0.00 0.00 3.67
3186 4002 2.474526 CGACGAATCATGCAGTTTGGTC 60.475 50.000 0.00 2.06 33.73 4.02
3187 4003 2.744202 GACGAATCATGCAGTTTGGTCT 59.256 45.455 11.43 0.00 34.05 3.85
3188 4004 2.744202 ACGAATCATGCAGTTTGGTCTC 59.256 45.455 0.00 0.00 0.00 3.36
3189 4005 3.005554 CGAATCATGCAGTTTGGTCTCT 58.994 45.455 0.00 0.00 0.00 3.10
3190 4006 3.063180 CGAATCATGCAGTTTGGTCTCTC 59.937 47.826 0.00 0.00 0.00 3.20
3191 4007 2.479566 TCATGCAGTTTGGTCTCTCC 57.520 50.000 0.00 0.00 0.00 3.71
3192 4008 1.699083 TCATGCAGTTTGGTCTCTCCA 59.301 47.619 0.00 0.00 45.60 3.86
3193 4009 2.306805 TCATGCAGTTTGGTCTCTCCAT 59.693 45.455 0.00 0.00 46.60 3.41
3194 4010 3.519107 TCATGCAGTTTGGTCTCTCCATA 59.481 43.478 0.00 0.00 46.60 2.74
3195 4011 4.164796 TCATGCAGTTTGGTCTCTCCATAT 59.835 41.667 0.00 0.00 46.60 1.78
3196 4012 4.574674 TGCAGTTTGGTCTCTCCATATT 57.425 40.909 0.00 0.00 46.60 1.28
3197 4013 4.517285 TGCAGTTTGGTCTCTCCATATTC 58.483 43.478 0.00 0.00 46.60 1.75
3198 4014 4.225942 TGCAGTTTGGTCTCTCCATATTCT 59.774 41.667 0.00 0.00 46.60 2.40
3199 4015 5.425217 TGCAGTTTGGTCTCTCCATATTCTA 59.575 40.000 0.00 0.00 46.60 2.10
3200 4016 5.755861 GCAGTTTGGTCTCTCCATATTCTAC 59.244 44.000 0.00 0.00 46.60 2.59
3201 4017 6.630413 GCAGTTTGGTCTCTCCATATTCTACA 60.630 42.308 0.00 0.00 46.60 2.74
3202 4018 6.983307 CAGTTTGGTCTCTCCATATTCTACAG 59.017 42.308 0.00 0.00 46.60 2.74
3203 4019 5.537300 TTGGTCTCTCCATATTCTACAGC 57.463 43.478 0.00 0.00 46.60 4.40
3204 4020 3.898123 TGGTCTCTCCATATTCTACAGCC 59.102 47.826 0.00 0.00 41.93 4.85
3205 4021 3.898123 GGTCTCTCCATATTCTACAGCCA 59.102 47.826 0.00 0.00 35.97 4.75
3206 4022 4.021544 GGTCTCTCCATATTCTACAGCCAG 60.022 50.000 0.00 0.00 35.97 4.85
3207 4023 4.021544 GTCTCTCCATATTCTACAGCCAGG 60.022 50.000 0.00 0.00 0.00 4.45
3208 4024 2.634940 TCTCCATATTCTACAGCCAGGC 59.365 50.000 1.84 1.84 0.00 4.85
3209 4025 1.344438 TCCATATTCTACAGCCAGGCG 59.656 52.381 5.55 3.56 0.00 5.52
3210 4026 1.070758 CCATATTCTACAGCCAGGCGT 59.929 52.381 5.55 9.93 0.00 5.68
3211 4027 2.408050 CATATTCTACAGCCAGGCGTC 58.592 52.381 5.55 0.00 0.00 5.19
3212 4028 0.384309 TATTCTACAGCCAGGCGTCG 59.616 55.000 5.55 3.79 0.00 5.12
3213 4029 2.907897 ATTCTACAGCCAGGCGTCGC 62.908 60.000 9.22 9.22 0.00 5.19
3221 4037 4.072088 CAGGCGTCGCGTCCAAAC 62.072 66.667 9.88 0.00 28.67 2.93
3229 4045 2.358984 GCGTCCAAACCGGCCTTA 60.359 61.111 0.00 0.00 33.14 2.69
3230 4046 1.967494 GCGTCCAAACCGGCCTTAA 60.967 57.895 0.00 0.00 33.14 1.85
3231 4047 1.517210 GCGTCCAAACCGGCCTTAAA 61.517 55.000 0.00 0.00 33.14 1.52
3232 4048 0.239082 CGTCCAAACCGGCCTTAAAC 59.761 55.000 0.00 0.00 33.14 2.01
3233 4049 0.599558 GTCCAAACCGGCCTTAAACC 59.400 55.000 0.00 0.00 33.14 3.27
3234 4050 0.540133 TCCAAACCGGCCTTAAACCC 60.540 55.000 0.00 0.00 33.14 4.11
3235 4051 0.541063 CCAAACCGGCCTTAAACCCT 60.541 55.000 0.00 0.00 0.00 4.34
3236 4052 0.885879 CAAACCGGCCTTAAACCCTC 59.114 55.000 0.00 0.00 0.00 4.30
3237 4053 0.607217 AAACCGGCCTTAAACCCTCG 60.607 55.000 0.00 0.00 0.00 4.63
3238 4054 2.124860 CCGGCCTTAAACCCTCGG 60.125 66.667 0.00 0.00 0.00 4.63
3239 4055 2.124860 CGGCCTTAAACCCTCGGG 60.125 66.667 0.00 0.00 42.03 5.14
3240 4056 2.439701 GGCCTTAAACCCTCGGGC 60.440 66.667 0.82 0.00 41.80 6.13
3241 4057 2.353573 GCCTTAAACCCTCGGGCA 59.646 61.111 0.82 0.00 42.08 5.36
3242 4058 1.749258 GCCTTAAACCCTCGGGCAG 60.749 63.158 0.82 0.00 42.08 4.85
3243 4059 1.749258 CCTTAAACCCTCGGGCAGC 60.749 63.158 0.82 0.00 39.32 5.25
3244 4060 1.749258 CTTAAACCCTCGGGCAGCC 60.749 63.158 1.26 1.26 39.32 4.85
3245 4061 3.615509 TTAAACCCTCGGGCAGCCG 62.616 63.158 5.00 0.62 39.32 5.52
3251 4067 3.610669 CTCGGGCAGCCGCTAGAT 61.611 66.667 5.00 0.00 38.60 1.98
3252 4068 3.565910 CTCGGGCAGCCGCTAGATC 62.566 68.421 5.00 0.00 38.60 2.75
3253 4069 3.916544 CGGGCAGCCGCTAGATCA 61.917 66.667 5.00 0.00 38.60 2.92
3254 4070 2.746359 GGGCAGCCGCTAGATCAT 59.254 61.111 5.00 0.00 38.60 2.45
3255 4071 1.072159 GGGCAGCCGCTAGATCATT 59.928 57.895 5.00 0.00 38.60 2.57
3256 4072 1.233285 GGGCAGCCGCTAGATCATTG 61.233 60.000 5.00 0.00 38.60 2.82
3257 4073 0.250038 GGCAGCCGCTAGATCATTGA 60.250 55.000 0.00 0.00 38.60 2.57
3258 4074 0.864455 GCAGCCGCTAGATCATTGAC 59.136 55.000 0.00 0.00 34.30 3.18
3259 4075 1.506493 CAGCCGCTAGATCATTGACC 58.494 55.000 0.00 0.00 0.00 4.02
3260 4076 0.032678 AGCCGCTAGATCATTGACCG 59.967 55.000 0.00 0.00 0.00 4.79
3261 4077 0.249489 GCCGCTAGATCATTGACCGT 60.249 55.000 0.00 0.00 0.00 4.83
3262 4078 1.806623 GCCGCTAGATCATTGACCGTT 60.807 52.381 0.00 0.00 0.00 4.44
3263 4079 2.128035 CCGCTAGATCATTGACCGTTC 58.872 52.381 0.00 0.00 0.00 3.95
3264 4080 2.481276 CCGCTAGATCATTGACCGTTCA 60.481 50.000 0.00 0.00 0.00 3.18
3265 4081 3.384668 CGCTAGATCATTGACCGTTCAT 58.615 45.455 0.00 0.00 0.00 2.57
3266 4082 3.183172 CGCTAGATCATTGACCGTTCATG 59.817 47.826 0.00 0.00 0.00 3.07
3267 4083 4.371786 GCTAGATCATTGACCGTTCATGA 58.628 43.478 0.00 0.00 0.00 3.07
3268 4084 4.993584 GCTAGATCATTGACCGTTCATGAT 59.006 41.667 0.00 7.31 34.94 2.45
3269 4085 5.468072 GCTAGATCATTGACCGTTCATGATT 59.532 40.000 0.00 4.01 33.62 2.57
3270 4086 6.017605 GCTAGATCATTGACCGTTCATGATTT 60.018 38.462 0.00 6.53 33.62 2.17
3271 4087 6.764308 AGATCATTGACCGTTCATGATTTT 57.236 33.333 0.00 1.32 33.62 1.82
3272 4088 7.161773 AGATCATTGACCGTTCATGATTTTT 57.838 32.000 0.00 0.00 33.62 1.94
3292 4108 5.441709 TTTTATCCAAACGGGTCTCAAAC 57.558 39.130 0.00 0.00 38.11 2.93
3293 4109 2.649531 ATCCAAACGGGTCTCAAACA 57.350 45.000 0.00 0.00 38.11 2.83
3294 4110 2.421751 TCCAAACGGGTCTCAAACAA 57.578 45.000 0.00 0.00 38.11 2.83
3295 4111 2.938838 TCCAAACGGGTCTCAAACAAT 58.061 42.857 0.00 0.00 38.11 2.71
3296 4112 2.621055 TCCAAACGGGTCTCAAACAATG 59.379 45.455 0.00 0.00 38.11 2.82
3297 4113 2.621055 CCAAACGGGTCTCAAACAATGA 59.379 45.455 0.00 0.00 36.38 2.57
3298 4114 5.518036 TCCAAACGGGTCTCAAACAATGAG 61.518 45.833 0.00 0.00 45.76 2.90
3306 4122 1.462616 TCAAACAATGAGGCGGATGG 58.537 50.000 0.00 0.00 33.04 3.51
3307 4123 0.457035 CAAACAATGAGGCGGATGGG 59.543 55.000 0.00 0.00 0.00 4.00
3308 4124 0.684153 AAACAATGAGGCGGATGGGG 60.684 55.000 0.00 0.00 0.00 4.96
3309 4125 2.908940 CAATGAGGCGGATGGGGC 60.909 66.667 0.00 0.00 0.00 5.80
3310 4126 4.569180 AATGAGGCGGATGGGGCG 62.569 66.667 0.00 0.00 37.59 6.13
3327 4143 2.338620 GCCCTGGCGGTTTGAAAC 59.661 61.111 0.00 0.00 0.00 2.78
3328 4144 2.200337 GCCCTGGCGGTTTGAAACT 61.200 57.895 8.09 0.00 0.00 2.66
3329 4145 1.744320 GCCCTGGCGGTTTGAAACTT 61.744 55.000 8.09 0.00 0.00 2.66
3330 4146 0.031994 CCCTGGCGGTTTGAAACTTG 59.968 55.000 8.09 2.53 0.00 3.16
3331 4147 0.744281 CCTGGCGGTTTGAAACTTGT 59.256 50.000 8.09 0.00 0.00 3.16
3332 4148 1.136110 CCTGGCGGTTTGAAACTTGTT 59.864 47.619 8.09 0.00 0.00 2.83
3333 4149 2.418060 CCTGGCGGTTTGAAACTTGTTT 60.418 45.455 8.09 0.00 0.00 2.83
3334 4150 2.857748 CTGGCGGTTTGAAACTTGTTTC 59.142 45.455 16.62 16.62 0.00 2.78
3335 4151 2.198406 GGCGGTTTGAAACTTGTTTCC 58.802 47.619 19.53 7.45 0.00 3.13
3336 4152 2.159156 GGCGGTTTGAAACTTGTTTCCT 60.159 45.455 19.53 0.00 0.00 3.36
3337 4153 3.517602 GCGGTTTGAAACTTGTTTCCTT 58.482 40.909 19.53 0.00 0.00 3.36
3338 4154 3.550275 GCGGTTTGAAACTTGTTTCCTTC 59.450 43.478 19.53 11.25 0.00 3.46
3339 4155 3.789224 CGGTTTGAAACTTGTTTCCTTCG 59.211 43.478 19.53 14.64 0.00 3.79
3340 4156 4.673320 CGGTTTGAAACTTGTTTCCTTCGT 60.673 41.667 19.53 0.00 0.00 3.85
3341 4157 5.165676 GGTTTGAAACTTGTTTCCTTCGTT 58.834 37.500 19.53 0.00 0.00 3.85
3342 4158 5.061684 GGTTTGAAACTTGTTTCCTTCGTTG 59.938 40.000 19.53 0.00 0.00 4.10
3343 4159 4.364415 TGAAACTTGTTTCCTTCGTTGG 57.636 40.909 19.53 0.00 0.00 3.77
3344 4160 4.011023 TGAAACTTGTTTCCTTCGTTGGA 58.989 39.130 19.53 0.00 0.00 3.53
3345 4161 4.642885 TGAAACTTGTTTCCTTCGTTGGAT 59.357 37.500 19.53 0.00 35.83 3.41
3346 4162 4.830826 AACTTGTTTCCTTCGTTGGATC 57.169 40.909 0.51 0.00 35.83 3.36
3347 4163 2.806244 ACTTGTTTCCTTCGTTGGATCG 59.194 45.455 0.51 0.00 35.83 3.69
3348 4164 1.803334 TGTTTCCTTCGTTGGATCGG 58.197 50.000 0.51 0.00 35.83 4.18
3349 4165 1.071071 TGTTTCCTTCGTTGGATCGGT 59.929 47.619 0.51 0.00 35.83 4.69
3350 4166 1.463444 GTTTCCTTCGTTGGATCGGTG 59.537 52.381 0.51 0.00 35.83 4.94
3351 4167 0.036765 TTCCTTCGTTGGATCGGTGG 60.037 55.000 0.51 0.00 35.83 4.61
3352 4168 2.106683 CCTTCGTTGGATCGGTGGC 61.107 63.158 0.00 0.00 0.00 5.01
3353 4169 2.433491 TTCGTTGGATCGGTGGCG 60.433 61.111 0.00 0.00 0.00 5.69
3354 4170 3.229156 TTCGTTGGATCGGTGGCGT 62.229 57.895 0.00 0.00 0.00 5.68
3355 4171 1.875420 TTCGTTGGATCGGTGGCGTA 61.875 55.000 0.00 0.00 0.00 4.42
3356 4172 1.876714 CGTTGGATCGGTGGCGTAG 60.877 63.158 0.00 0.00 0.00 3.51
3379 4195 2.438434 GCGGGTTGCATAGTGCCT 60.438 61.111 0.00 0.00 44.23 4.75
3380 4196 1.153249 GCGGGTTGCATAGTGCCTA 60.153 57.895 0.00 0.00 44.23 3.93
3381 4197 1.160329 GCGGGTTGCATAGTGCCTAG 61.160 60.000 0.00 0.00 44.23 3.02
3382 4198 1.160329 CGGGTTGCATAGTGCCTAGC 61.160 60.000 0.00 0.00 44.23 3.42
3383 4199 0.819666 GGGTTGCATAGTGCCTAGCC 60.820 60.000 0.00 3.49 44.23 3.93
3384 4200 0.107214 GGTTGCATAGTGCCTAGCCA 60.107 55.000 0.00 0.00 44.23 4.75
3385 4201 1.477558 GGTTGCATAGTGCCTAGCCAT 60.478 52.381 0.00 0.00 44.23 4.40
3386 4202 1.876156 GTTGCATAGTGCCTAGCCATC 59.124 52.381 0.00 0.00 44.23 3.51
3387 4203 0.397941 TGCATAGTGCCTAGCCATCC 59.602 55.000 0.00 0.00 44.23 3.51
3388 4204 0.397941 GCATAGTGCCTAGCCATCCA 59.602 55.000 0.00 0.00 37.42 3.41
3389 4205 1.879796 GCATAGTGCCTAGCCATCCAC 60.880 57.143 0.00 0.00 37.42 4.02
3390 4206 0.681733 ATAGTGCCTAGCCATCCACG 59.318 55.000 0.00 0.00 33.62 4.94
3391 4207 0.686441 TAGTGCCTAGCCATCCACGT 60.686 55.000 0.00 0.00 33.62 4.49
3394 4210 2.903357 CCTAGCCATCCACGTGCT 59.097 61.111 10.91 6.27 39.10 4.40
3397 4213 2.584261 CTAGCCATCCACGTGCTGCT 62.584 60.000 10.91 15.94 36.57 4.24
3406 4222 2.120909 ACGTGCTGCTGCCACTTTT 61.121 52.632 13.47 0.00 38.71 2.27
3409 4225 1.455402 TGCTGCTGCCACTTTTCCA 60.455 52.632 13.47 0.00 38.71 3.53
3415 4231 0.954452 CTGCCACTTTTCCACTCCAC 59.046 55.000 0.00 0.00 0.00 4.02
3417 4233 0.178990 GCCACTTTTCCACTCCACCT 60.179 55.000 0.00 0.00 0.00 4.00
3419 4235 1.133792 CCACTTTTCCACTCCACCTGT 60.134 52.381 0.00 0.00 0.00 4.00
3421 4237 2.127708 ACTTTTCCACTCCACCTGTCT 58.872 47.619 0.00 0.00 0.00 3.41
3423 4239 1.507140 TTTCCACTCCACCTGTCTGT 58.493 50.000 0.00 0.00 0.00 3.41
3430 4246 3.692101 CACTCCACCTGTCTGTCTAGTAG 59.308 52.174 0.00 0.00 0.00 2.57
3467 4287 1.281419 TGGGGAACGAGCCATTTCTA 58.719 50.000 0.00 0.00 0.00 2.10
3471 4291 1.062148 GGAACGAGCCATTTCTAACGC 59.938 52.381 0.00 0.00 0.00 4.84
3473 4293 0.036765 ACGAGCCATTTCTAACGCCA 60.037 50.000 0.00 0.00 0.00 5.69
3508 4328 0.249405 CTCCTTGAGCAGATCCGAGC 60.249 60.000 0.00 0.00 0.00 5.03
3513 4333 1.288752 GAGCAGATCCGAGCTAGGC 59.711 63.158 8.21 0.00 42.04 3.93
3514 4334 1.456518 AGCAGATCCGAGCTAGGCA 60.457 57.895 8.21 0.00 39.78 4.75
3520 4340 2.356818 ATCCGAGCTAGGCACGAAGC 62.357 60.000 8.21 0.00 44.57 3.86
3552 4372 0.972883 GGGGCTACCTCTAGATGCAG 59.027 60.000 0.00 0.00 36.80 4.41
3561 4381 2.234143 CTCTAGATGCAGTGGATCCGA 58.766 52.381 19.85 15.30 0.00 4.55
3562 4382 2.625314 CTCTAGATGCAGTGGATCCGAA 59.375 50.000 19.85 6.41 0.00 4.30
3563 4383 3.031013 TCTAGATGCAGTGGATCCGAAA 58.969 45.455 19.85 4.11 0.00 3.46
3578 4398 1.623811 CCGAAAGAGGAGTTGGAGGAA 59.376 52.381 0.00 0.00 0.00 3.36
3587 4407 2.107366 GAGTTGGAGGAAGAGGAGGAG 58.893 57.143 0.00 0.00 0.00 3.69
3588 4408 0.539518 GTTGGAGGAAGAGGAGGAGC 59.460 60.000 0.00 0.00 0.00 4.70
3589 4409 0.618968 TTGGAGGAAGAGGAGGAGCC 60.619 60.000 0.00 0.00 0.00 4.70
3590 4410 2.131067 GGAGGAAGAGGAGGAGCCG 61.131 68.421 0.00 0.00 43.43 5.52
3591 4411 1.076632 GAGGAAGAGGAGGAGCCGA 60.077 63.158 0.00 0.00 43.43 5.54
3611 4440 0.327000 AGGAGGAAGATGTGGGGGAG 60.327 60.000 0.00 0.00 0.00 4.30
3612 4441 1.529309 GAGGAAGATGTGGGGGAGC 59.471 63.158 0.00 0.00 0.00 4.70
3613 4442 0.985490 GAGGAAGATGTGGGGGAGCT 60.985 60.000 0.00 0.00 0.00 4.09
3614 4443 1.225704 GGAAGATGTGGGGGAGCTG 59.774 63.158 0.00 0.00 0.00 4.24
3617 4446 2.692368 GATGTGGGGGAGCTGGGA 60.692 66.667 0.00 0.00 0.00 4.37
3640 4469 4.193334 CGACGCGGATCTGCAGGA 62.193 66.667 25.69 0.57 34.15 3.86
3669 4498 1.124477 GGCCATCCTCGATTCCCTCT 61.124 60.000 0.00 0.00 0.00 3.69
3680 4509 0.336737 ATTCCCTCTGGTCGGAGTCT 59.663 55.000 6.12 0.00 0.00 3.24
3682 4511 1.304547 CCCTCTGGTCGGAGTCTGT 60.305 63.158 0.00 0.00 0.00 3.41
3686 4515 1.112916 TCTGGTCGGAGTCTGTTGCA 61.113 55.000 0.00 0.00 0.00 4.08
3692 4521 1.676384 GGAGTCTGTTGCAGAGGCT 59.324 57.895 1.75 1.75 41.46 4.58
3698 4527 0.244994 CTGTTGCAGAGGCTAGACGT 59.755 55.000 0.00 0.00 41.91 4.34
3700 4529 0.243907 GTTGCAGAGGCTAGACGTCA 59.756 55.000 19.50 2.84 41.91 4.35
3710 4539 2.990674 CTAGACGTCATCGCCGGCAG 62.991 65.000 28.98 19.33 41.18 4.85
3721 4550 4.247380 CCGGCAGGAGATGGAGGC 62.247 72.222 0.00 0.00 41.02 4.70
3725 4554 2.108566 CAGGAGATGGAGGCGCAG 59.891 66.667 10.83 0.00 0.00 5.18
3750 4579 2.262915 CGGAGGAGGCGGATATGC 59.737 66.667 0.00 0.00 0.00 3.14
3752 4581 1.594310 GGAGGAGGCGGATATGCTC 59.406 63.158 0.00 0.00 33.52 4.26
3753 4582 1.188219 GGAGGAGGCGGATATGCTCA 61.188 60.000 0.00 0.00 35.76 4.26
3754 4583 0.901124 GAGGAGGCGGATATGCTCAT 59.099 55.000 0.00 0.00 34.36 2.90
3759 4588 2.493675 GAGGCGGATATGCTCATCTACA 59.506 50.000 0.00 0.00 34.52 2.74
3782 4611 2.158234 GGATGAGGTGGAGTAGGAGGAT 60.158 54.545 0.00 0.00 0.00 3.24
3783 4612 2.461300 TGAGGTGGAGTAGGAGGATG 57.539 55.000 0.00 0.00 0.00 3.51
3788 4635 0.636647 TGGAGTAGGAGGATGAGCCA 59.363 55.000 0.00 0.00 40.02 4.75
3845 4692 5.640357 CGATGAAGAGTAGCTAGGGTAGTAG 59.360 48.000 0.00 0.00 0.00 2.57
3846 4693 5.972327 TGAAGAGTAGCTAGGGTAGTAGT 57.028 43.478 0.00 0.00 0.00 2.73
3847 4694 7.525194 CGATGAAGAGTAGCTAGGGTAGTAGTA 60.525 44.444 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.942962 CGCGAGAGATAACTACGGGT 59.057 55.000 0.00 0.00 35.84 5.28
1 2 0.385723 GCGCGAGAGATAACTACGGG 60.386 60.000 12.10 0.00 39.58 5.28
3 4 1.972640 CATGCGCGAGAGATAACTACG 59.027 52.381 12.10 0.00 0.00 3.51
4 5 3.269486 TCATGCGCGAGAGATAACTAC 57.731 47.619 12.10 0.00 0.00 2.73
5 6 3.502211 TCATCATGCGCGAGAGATAACTA 59.498 43.478 12.10 0.00 0.00 2.24
6 7 2.294512 TCATCATGCGCGAGAGATAACT 59.705 45.455 12.10 0.00 0.00 2.24
7 8 2.406691 GTCATCATGCGCGAGAGATAAC 59.593 50.000 12.10 1.00 0.00 1.89
8 9 2.608016 GGTCATCATGCGCGAGAGATAA 60.608 50.000 12.10 0.00 0.00 1.75
9 10 1.068264 GGTCATCATGCGCGAGAGATA 60.068 52.381 12.10 0.00 0.00 1.98
10 11 0.319383 GGTCATCATGCGCGAGAGAT 60.319 55.000 12.10 5.98 0.00 2.75
11 12 1.066422 GGTCATCATGCGCGAGAGA 59.934 57.895 12.10 3.29 0.00 3.10
12 13 2.298629 CGGTCATCATGCGCGAGAG 61.299 63.158 12.10 0.00 0.00 3.20
13 14 2.278792 CGGTCATCATGCGCGAGA 60.279 61.111 12.10 4.18 0.00 4.04
14 15 3.333189 CCGGTCATCATGCGCGAG 61.333 66.667 12.10 0.00 0.00 5.03
15 16 3.150647 ATCCGGTCATCATGCGCGA 62.151 57.895 12.10 0.00 0.00 5.87
86 87 0.955428 TCACGTCAAGCCCTTGCATC 60.955 55.000 3.18 0.00 40.24 3.91
87 88 0.322816 ATCACGTCAAGCCCTTGCAT 60.323 50.000 3.18 0.00 40.24 3.96
88 89 1.073025 ATCACGTCAAGCCCTTGCA 59.927 52.632 3.18 0.00 40.24 4.08
89 90 1.503542 CATCACGTCAAGCCCTTGC 59.496 57.895 3.18 0.00 40.24 4.01
92 93 1.003355 CACCATCACGTCAAGCCCT 60.003 57.895 0.00 0.00 0.00 5.19
157 158 4.110482 AGTACTCGGTTGCGAAATGATAC 58.890 43.478 0.00 0.00 0.00 2.24
166 520 2.476854 GGTGTACTAGTACTCGGTTGCG 60.477 54.545 28.56 0.00 37.00 4.85
178 535 4.813027 TGAAAGTAAAGCCGGTGTACTAG 58.187 43.478 1.90 0.00 0.00 2.57
179 536 4.523943 TCTGAAAGTAAAGCCGGTGTACTA 59.476 41.667 1.90 0.00 33.76 1.82
180 537 3.322828 TCTGAAAGTAAAGCCGGTGTACT 59.677 43.478 1.90 5.66 33.76 2.73
188 545 5.463724 CGTAGGATCATCTGAAAGTAAAGCC 59.536 44.000 0.00 0.00 33.76 4.35
190 547 8.407064 ACTACGTAGGATCATCTGAAAGTAAAG 58.593 37.037 25.63 0.00 33.76 1.85
193 550 8.834465 GTTACTACGTAGGATCATCTGAAAGTA 58.166 37.037 25.63 4.38 33.76 2.24
198 555 6.996282 TCATGTTACTACGTAGGATCATCTGA 59.004 38.462 22.98 18.35 26.82 3.27
201 558 6.967135 TGTCATGTTACTACGTAGGATCATC 58.033 40.000 22.98 15.65 26.82 2.92
208 565 4.729595 TGCACTGTCATGTTACTACGTAG 58.270 43.478 20.97 20.97 0.00 3.51
211 568 3.242091 GCATGCACTGTCATGTTACTACG 60.242 47.826 14.21 0.00 44.20 3.51
212 569 3.063997 GGCATGCACTGTCATGTTACTAC 59.936 47.826 21.36 0.00 44.20 2.73
213 570 3.270027 GGCATGCACTGTCATGTTACTA 58.730 45.455 21.36 0.00 44.20 1.82
226 583 1.728069 CAGCTCAGATGGCATGCAC 59.272 57.895 21.36 9.64 0.00 4.57
228 585 2.722487 GCAGCTCAGATGGCATGC 59.278 61.111 9.90 9.90 0.00 4.06
233 590 0.035725 TGACAAGGCAGCTCAGATGG 60.036 55.000 0.00 0.00 0.00 3.51
241 598 0.102844 TTTGTGCTTGACAAGGCAGC 59.897 50.000 16.80 3.62 45.43 5.25
254 611 2.838736 TCTTCAGAGGACACTTTGTGC 58.161 47.619 0.00 0.00 39.13 4.57
258 615 8.214364 AGAGTAATTTTCTTCAGAGGACACTTT 58.786 33.333 0.00 0.00 0.00 2.66
285 648 3.579709 AGCATCAGTAACACGACTTGAG 58.420 45.455 0.00 0.00 0.00 3.02
287 650 4.234574 TGTAGCATCAGTAACACGACTTG 58.765 43.478 0.00 0.00 0.00 3.16
289 652 3.506455 ACTGTAGCATCAGTAACACGACT 59.494 43.478 11.18 0.00 45.31 4.18
290 653 3.834610 ACTGTAGCATCAGTAACACGAC 58.165 45.455 11.18 0.00 45.31 4.34
291 654 3.504520 TGACTGTAGCATCAGTAACACGA 59.495 43.478 12.51 0.00 46.81 4.35
292 655 3.608506 GTGACTGTAGCATCAGTAACACG 59.391 47.826 18.09 0.00 46.81 4.49
295 658 3.179830 CGGTGACTGTAGCATCAGTAAC 58.820 50.000 15.95 15.95 46.81 2.50
296 659 2.823747 ACGGTGACTGTAGCATCAGTAA 59.176 45.455 12.51 4.39 46.81 2.24
297 660 2.163613 CACGGTGACTGTAGCATCAGTA 59.836 50.000 12.51 1.75 46.81 2.74
299 662 1.067565 ACACGGTGACTGTAGCATCAG 60.068 52.381 16.29 6.61 40.80 2.90
301 664 1.336887 ACACACGGTGACTGTAGCATC 60.337 52.381 16.29 0.00 36.96 3.91
302 665 0.679505 ACACACGGTGACTGTAGCAT 59.320 50.000 16.29 0.00 36.96 3.79
303 666 2.120765 ACACACGGTGACTGTAGCA 58.879 52.632 16.29 0.00 36.96 3.49
526 895 6.030228 CACTAATGATTCCCGCTTCTTTTTC 58.970 40.000 0.00 0.00 0.00 2.29
527 896 5.622233 GCACTAATGATTCCCGCTTCTTTTT 60.622 40.000 0.00 0.00 0.00 1.94
528 897 4.142381 GCACTAATGATTCCCGCTTCTTTT 60.142 41.667 0.00 0.00 0.00 2.27
595 964 9.214957 ACGACTTTCATTGACTATAATTTGACA 57.785 29.630 0.00 0.00 0.00 3.58
660 1329 1.407258 TGGAAAGAAGGGTGCGTTTTG 59.593 47.619 0.00 0.00 0.00 2.44
730 1433 7.719193 TCAGGAATGAAACAGAACAATACAAGA 59.281 33.333 0.00 0.00 0.00 3.02
734 1437 6.797033 CGTTCAGGAATGAAACAGAACAATAC 59.203 38.462 0.00 0.00 36.16 1.89
852 1639 2.164422 TGCACAGAGAACCTCGATACTG 59.836 50.000 0.00 0.00 35.36 2.74
874 1661 5.667539 TGTGGAAGAGATAGTGAGGAAAG 57.332 43.478 0.00 0.00 0.00 2.62
907 1702 3.334054 AAGAGGACTGCCCCTGCC 61.334 66.667 0.00 0.00 36.49 4.85
908 1703 2.270527 GAAGAGGACTGCCCCTGC 59.729 66.667 0.00 0.00 36.49 4.85
909 1704 2.993853 GGAAGAGGACTGCCCCTG 59.006 66.667 0.00 0.00 35.82 4.45
1198 1994 3.006247 GGACTGAGAGAGAAAATGGTGC 58.994 50.000 0.00 0.00 0.00 5.01
1239 2035 6.213195 AGAACAAGAAGAACAGATCCAGAGAT 59.787 38.462 0.00 0.00 34.57 2.75
1251 2047 5.320607 GCATTTGCAAGAACAAGAAGAAC 57.679 39.130 0.00 0.00 41.59 3.01
1486 2282 4.202398 TGTCCCTGATCTTGCAATAGATCC 60.202 45.833 20.63 9.25 46.50 3.36
1529 2325 2.904434 GGAGTACTTCCCAGACAAAGGA 59.096 50.000 0.00 0.00 40.37 3.36
1530 2326 3.336138 GGAGTACTTCCCAGACAAAGG 57.664 52.381 0.00 0.00 40.37 3.11
1545 2341 6.070424 ACAAATAATTCGGAACAGAGGGAGTA 60.070 38.462 0.00 0.00 0.00 2.59
1546 2342 5.186198 CAAATAATTCGGAACAGAGGGAGT 58.814 41.667 0.00 0.00 0.00 3.85
1547 2343 5.186198 ACAAATAATTCGGAACAGAGGGAG 58.814 41.667 0.00 0.00 0.00 4.30
1548 2344 5.174037 ACAAATAATTCGGAACAGAGGGA 57.826 39.130 0.00 0.00 0.00 4.20
1549 2345 5.897377 AACAAATAATTCGGAACAGAGGG 57.103 39.130 0.00 0.00 0.00 4.30
1550 2346 8.726988 TCTAAAACAAATAATTCGGAACAGAGG 58.273 33.333 0.00 0.00 0.00 3.69
1590 2386 9.631452 CGACTCATTTTAATGCTAGATATCTCA 57.369 33.333 8.95 2.25 36.36 3.27
1591 2387 9.632807 ACGACTCATTTTAATGCTAGATATCTC 57.367 33.333 8.95 0.00 36.36 2.75
1599 2395 9.894783 GTCTAGATACGACTCATTTTAATGCTA 57.105 33.333 0.00 0.00 36.36 3.49
1600 2396 8.414003 TGTCTAGATACGACTCATTTTAATGCT 58.586 33.333 0.00 0.00 36.36 3.79
1601 2397 8.575565 TGTCTAGATACGACTCATTTTAATGC 57.424 34.615 0.00 0.00 36.36 3.56
1605 2401 9.745880 GGATTTGTCTAGATACGACTCATTTTA 57.254 33.333 0.00 0.00 32.70 1.52
1606 2402 8.258007 TGGATTTGTCTAGATACGACTCATTTT 58.742 33.333 0.00 0.00 32.70 1.82
1607 2403 7.782049 TGGATTTGTCTAGATACGACTCATTT 58.218 34.615 0.00 0.00 32.70 2.32
1608 2404 7.348080 TGGATTTGTCTAGATACGACTCATT 57.652 36.000 0.00 0.00 32.70 2.57
1609 2405 6.961360 TGGATTTGTCTAGATACGACTCAT 57.039 37.500 0.00 0.00 32.70 2.90
1610 2406 6.602009 TCTTGGATTTGTCTAGATACGACTCA 59.398 38.462 0.00 0.00 32.70 3.41
1611 2407 7.012515 TCTCTTGGATTTGTCTAGATACGACTC 59.987 40.741 0.00 0.00 32.70 3.36
1612 2408 6.829298 TCTCTTGGATTTGTCTAGATACGACT 59.171 38.462 0.00 0.00 32.70 4.18
1613 2409 7.028926 TCTCTTGGATTTGTCTAGATACGAC 57.971 40.000 0.00 0.00 0.00 4.34
1614 2410 7.339721 ACTTCTCTTGGATTTGTCTAGATACGA 59.660 37.037 0.00 0.00 0.00 3.43
1615 2411 7.484975 ACTTCTCTTGGATTTGTCTAGATACG 58.515 38.462 0.00 0.00 0.00 3.06
1619 2415 9.877178 GAATTACTTCTCTTGGATTTGTCTAGA 57.123 33.333 0.00 0.00 0.00 2.43
1620 2416 9.658799 TGAATTACTTCTCTTGGATTTGTCTAG 57.341 33.333 0.00 0.00 32.29 2.43
1621 2417 9.658799 CTGAATTACTTCTCTTGGATTTGTCTA 57.341 33.333 0.00 0.00 32.29 2.59
1622 2418 8.378565 TCTGAATTACTTCTCTTGGATTTGTCT 58.621 33.333 0.00 0.00 32.29 3.41
1623 2419 8.553459 TCTGAATTACTTCTCTTGGATTTGTC 57.447 34.615 0.00 0.00 32.29 3.18
1624 2420 8.787852 GTTCTGAATTACTTCTCTTGGATTTGT 58.212 33.333 0.00 0.00 32.29 2.83
1625 2421 7.959651 CGTTCTGAATTACTTCTCTTGGATTTG 59.040 37.037 0.00 0.00 32.29 2.32
1626 2422 7.119846 CCGTTCTGAATTACTTCTCTTGGATTT 59.880 37.037 0.00 0.00 32.29 2.17
1627 2423 6.595716 CCGTTCTGAATTACTTCTCTTGGATT 59.404 38.462 0.00 0.00 32.29 3.01
1628 2424 6.070767 TCCGTTCTGAATTACTTCTCTTGGAT 60.071 38.462 0.00 0.00 32.29 3.41
1629 2425 5.245301 TCCGTTCTGAATTACTTCTCTTGGA 59.755 40.000 0.00 0.00 32.29 3.53
1630 2426 5.479306 TCCGTTCTGAATTACTTCTCTTGG 58.521 41.667 0.00 0.00 32.29 3.61
1631 2427 5.578727 CCTCCGTTCTGAATTACTTCTCTTG 59.421 44.000 0.00 0.00 32.29 3.02
1632 2428 5.337652 CCCTCCGTTCTGAATTACTTCTCTT 60.338 44.000 0.00 0.00 32.29 2.85
1633 2429 4.160626 CCCTCCGTTCTGAATTACTTCTCT 59.839 45.833 0.00 0.00 32.29 3.10
1634 2430 4.159879 TCCCTCCGTTCTGAATTACTTCTC 59.840 45.833 0.00 0.00 32.29 2.87
1635 2431 4.094476 TCCCTCCGTTCTGAATTACTTCT 58.906 43.478 0.00 0.00 32.29 2.85
1636 2432 4.081586 ACTCCCTCCGTTCTGAATTACTTC 60.082 45.833 0.00 0.00 0.00 3.01
1637 2433 3.838903 ACTCCCTCCGTTCTGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
1638 2434 3.442076 ACTCCCTCCGTTCTGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
1639 2435 3.889520 ACTCCCTCCGTTCTGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
1640 2436 3.383825 GCTACTCCCTCCGTTCTGAATTA 59.616 47.826 0.00 0.00 0.00 1.40
1641 2437 2.168728 GCTACTCCCTCCGTTCTGAATT 59.831 50.000 0.00 0.00 0.00 2.17
1642 2438 1.757699 GCTACTCCCTCCGTTCTGAAT 59.242 52.381 0.00 0.00 0.00 2.57
1643 2439 1.183549 GCTACTCCCTCCGTTCTGAA 58.816 55.000 0.00 0.00 0.00 3.02
1644 2440 0.039180 TGCTACTCCCTCCGTTCTGA 59.961 55.000 0.00 0.00 0.00 3.27
1645 2441 0.895530 TTGCTACTCCCTCCGTTCTG 59.104 55.000 0.00 0.00 0.00 3.02
1646 2442 1.640917 TTTGCTACTCCCTCCGTTCT 58.359 50.000 0.00 0.00 0.00 3.01
1647 2443 2.467566 TTTTGCTACTCCCTCCGTTC 57.532 50.000 0.00 0.00 0.00 3.95
1648 2444 2.711542 CATTTTGCTACTCCCTCCGTT 58.288 47.619 0.00 0.00 0.00 4.44
1649 2445 1.679032 GCATTTTGCTACTCCCTCCGT 60.679 52.381 0.00 0.00 40.96 4.69
1650 2446 1.017387 GCATTTTGCTACTCCCTCCG 58.983 55.000 0.00 0.00 40.96 4.63
1651 2447 2.019984 CTGCATTTTGCTACTCCCTCC 58.980 52.381 0.75 0.00 45.31 4.30
1652 2448 2.019984 CCTGCATTTTGCTACTCCCTC 58.980 52.381 0.75 0.00 45.31 4.30
1653 2449 1.341383 CCCTGCATTTTGCTACTCCCT 60.341 52.381 0.75 0.00 45.31 4.20
1654 2450 1.106285 CCCTGCATTTTGCTACTCCC 58.894 55.000 0.75 0.00 45.31 4.30
1655 2451 1.745653 GTCCCTGCATTTTGCTACTCC 59.254 52.381 0.75 0.00 45.31 3.85
1656 2452 2.436417 TGTCCCTGCATTTTGCTACTC 58.564 47.619 0.75 0.00 45.31 2.59
1657 2453 2.584835 TGTCCCTGCATTTTGCTACT 57.415 45.000 0.75 0.00 45.31 2.57
1658 2454 3.019564 AGATGTCCCTGCATTTTGCTAC 58.980 45.455 0.75 0.00 45.31 3.58
1659 2455 3.282021 GAGATGTCCCTGCATTTTGCTA 58.718 45.455 0.75 0.00 45.31 3.49
1700 2496 2.099263 GCGTGCACTAGACTGGAGATAA 59.901 50.000 16.19 0.00 0.00 1.75
1707 2503 3.536394 CGCGCGTGCACTAGACTG 61.536 66.667 24.19 0.00 42.97 3.51
1748 2545 2.173519 CAGACCTGCATCACCCAAAAT 58.826 47.619 0.00 0.00 0.00 1.82
1774 2571 1.615107 CCGTCTCGAAGTTGCCGTTC 61.615 60.000 0.00 0.00 0.00 3.95
2155 2952 2.915659 AAGGTGACCTCCGCGACA 60.916 61.111 8.23 0.00 30.89 4.35
2162 2959 0.606673 GGGTTGCTGAAGGTGACCTC 60.607 60.000 3.76 0.00 30.89 3.85
2285 3082 1.662446 TTCGTGGAGGCGAAACGAC 60.662 57.895 10.33 0.00 46.11 4.34
2305 3102 3.928005 ACATCAGATGGAGCAGAACAT 57.072 42.857 15.13 0.00 33.60 2.71
2306 3103 3.429410 CGTACATCAGATGGAGCAGAACA 60.429 47.826 15.13 0.00 33.60 3.18
2307 3104 3.119291 CGTACATCAGATGGAGCAGAAC 58.881 50.000 15.13 1.10 33.60 3.01
2309 3106 1.067669 GCGTACATCAGATGGAGCAGA 59.932 52.381 15.13 0.00 33.60 4.26
2311 3108 0.823460 TGCGTACATCAGATGGAGCA 59.177 50.000 19.37 19.37 36.33 4.26
2313 3110 2.862536 CAACTGCGTACATCAGATGGAG 59.137 50.000 15.13 6.52 35.61 3.86
2314 3111 2.892374 CAACTGCGTACATCAGATGGA 58.108 47.619 15.13 2.76 35.61 3.41
2315 3112 1.328680 GCAACTGCGTACATCAGATGG 59.671 52.381 15.13 0.00 35.64 3.51
2316 3113 2.726555 GCAACTGCGTACATCAGATG 57.273 50.000 16.31 9.03 37.39 2.90
2328 3125 1.154150 GGCATCGTCAAGCAACTGC 60.154 57.895 0.00 0.00 42.49 4.40
2329 3126 0.806868 ATGGCATCGTCAAGCAACTG 59.193 50.000 0.00 0.00 0.00 3.16
2330 3127 1.200716 CAATGGCATCGTCAAGCAACT 59.799 47.619 0.00 0.00 0.00 3.16
2332 3129 1.532523 TCAATGGCATCGTCAAGCAA 58.467 45.000 0.00 0.00 0.00 3.91
2333 3130 1.402613 CATCAATGGCATCGTCAAGCA 59.597 47.619 0.00 0.00 0.00 3.91
2335 3132 3.302675 CGTACATCAATGGCATCGTCAAG 60.303 47.826 0.00 0.00 0.00 3.02
2345 3142 1.737838 ACAGCCACGTACATCAATGG 58.262 50.000 0.00 0.00 35.17 3.16
2346 3143 2.728846 GCAACAGCCACGTACATCAATG 60.729 50.000 0.00 0.00 0.00 2.82
2351 3148 0.034756 TCTGCAACAGCCACGTACAT 59.965 50.000 0.00 0.00 0.00 2.29
2355 3152 1.156736 GTTATCTGCAACAGCCACGT 58.843 50.000 0.00 0.00 0.00 4.49
2356 3153 0.447801 GGTTATCTGCAACAGCCACG 59.552 55.000 0.00 0.00 0.00 4.94
2357 3154 1.470098 CAGGTTATCTGCAACAGCCAC 59.530 52.381 0.00 0.00 36.60 5.01
2358 3155 1.350684 TCAGGTTATCTGCAACAGCCA 59.649 47.619 0.00 0.00 43.06 4.75
2359 3156 2.113860 TCAGGTTATCTGCAACAGCC 57.886 50.000 0.00 0.00 43.06 4.85
2360 3157 3.273434 TGATCAGGTTATCTGCAACAGC 58.727 45.455 0.00 0.00 43.06 4.40
2361 3158 5.181009 TCTTGATCAGGTTATCTGCAACAG 58.819 41.667 4.57 0.00 43.06 3.16
2362 3159 5.164620 TCTTGATCAGGTTATCTGCAACA 57.835 39.130 4.57 0.00 43.06 3.33
2363 3160 5.446473 CGTTCTTGATCAGGTTATCTGCAAC 60.446 44.000 4.57 0.00 43.06 4.17
2364 3161 4.631377 CGTTCTTGATCAGGTTATCTGCAA 59.369 41.667 4.57 0.00 43.06 4.08
2392 3189 4.207281 TGCGGCCCGATCTCGAAG 62.207 66.667 7.68 0.00 43.02 3.79
2548 3345 3.760035 AGCTCCACCGCGTACTGG 61.760 66.667 4.92 6.88 34.40 4.00
2860 3657 1.293924 GCATGATCTTGACCTGGTCG 58.706 55.000 21.15 8.73 34.95 4.79
2896 3693 2.054232 TCTGGTCTACTCCGATGGAC 57.946 55.000 0.00 0.00 0.00 4.02
2947 3750 4.059511 ACATAGTAGACGAGAGGACGATG 58.940 47.826 0.00 0.00 34.29 3.84
2967 3770 9.258629 ACAAATTACATACCCACTACTACTACA 57.741 33.333 0.00 0.00 0.00 2.74
2968 3771 9.525409 CACAAATTACATACCCACTACTACTAC 57.475 37.037 0.00 0.00 0.00 2.73
2969 3772 9.478238 TCACAAATTACATACCCACTACTACTA 57.522 33.333 0.00 0.00 0.00 1.82
2970 3773 8.255905 GTCACAAATTACATACCCACTACTACT 58.744 37.037 0.00 0.00 0.00 2.57
2984 3791 6.009589 AGGTCCATCAATGTCACAAATTACA 58.990 36.000 0.00 0.00 0.00 2.41
3001 3808 3.634448 CACACGATTAGAGAGAGGTCCAT 59.366 47.826 0.00 0.00 0.00 3.41
3065 3879 0.517316 AACAAATTGACGGAGCTCGC 59.483 50.000 7.83 0.00 43.89 5.03
3066 3880 2.574322 CAAACAAATTGACGGAGCTCG 58.426 47.619 7.83 5.83 41.85 5.03
3067 3881 2.351738 CCCAAACAAATTGACGGAGCTC 60.352 50.000 4.71 4.71 41.85 4.09
3068 3882 1.613437 CCCAAACAAATTGACGGAGCT 59.387 47.619 0.00 0.00 41.85 4.09
3069 3883 1.611491 TCCCAAACAAATTGACGGAGC 59.389 47.619 0.00 0.00 41.85 4.70
3070 3884 4.519540 AATCCCAAACAAATTGACGGAG 57.480 40.909 0.00 0.00 41.85 4.63
3071 3885 4.626042 CAAATCCCAAACAAATTGACGGA 58.374 39.130 0.00 0.00 41.85 4.69
3072 3886 3.186205 GCAAATCCCAAACAAATTGACGG 59.814 43.478 0.00 0.00 41.85 4.79
3074 3888 3.807071 ACGCAAATCCCAAACAAATTGAC 59.193 39.130 0.00 0.00 41.85 3.18
3115 3931 5.220397 GCGTCGTCATTACAAAATCATCTCA 60.220 40.000 0.00 0.00 0.00 3.27
3140 3956 1.887242 TGCGCAGTGAACAGTGGAC 60.887 57.895 5.66 0.00 32.50 4.02
3145 3961 0.111266 GTTACGTGCGCAGTGAACAG 60.111 55.000 12.22 0.00 0.00 3.16
3160 3976 2.268298 ACTGCATGATTCGTCGGTTAC 58.732 47.619 0.00 0.00 0.00 2.50
3161 3977 2.665649 ACTGCATGATTCGTCGGTTA 57.334 45.000 0.00 0.00 0.00 2.85
3162 3978 1.808411 AACTGCATGATTCGTCGGTT 58.192 45.000 0.00 0.00 0.00 4.44
3163 3979 1.464608 CAAACTGCATGATTCGTCGGT 59.535 47.619 0.00 0.00 0.00 4.69
3164 3980 1.202065 CCAAACTGCATGATTCGTCGG 60.202 52.381 0.00 0.00 0.00 4.79
3165 3981 1.464608 ACCAAACTGCATGATTCGTCG 59.535 47.619 0.00 0.00 0.00 5.12
3166 3982 2.744202 AGACCAAACTGCATGATTCGTC 59.256 45.455 0.00 0.00 0.00 4.20
3167 3983 2.744202 GAGACCAAACTGCATGATTCGT 59.256 45.455 0.00 0.00 0.00 3.85
3168 3984 3.005554 AGAGACCAAACTGCATGATTCG 58.994 45.455 0.00 0.00 0.00 3.34
3169 3985 3.376546 GGAGAGACCAAACTGCATGATTC 59.623 47.826 0.00 0.00 38.79 2.52
3170 3986 3.245016 TGGAGAGACCAAACTGCATGATT 60.245 43.478 0.00 0.00 46.75 2.57
3171 3987 2.306805 TGGAGAGACCAAACTGCATGAT 59.693 45.455 0.00 0.00 46.75 2.45
3172 3988 1.699083 TGGAGAGACCAAACTGCATGA 59.301 47.619 0.00 0.00 46.75 3.07
3173 3989 2.189594 TGGAGAGACCAAACTGCATG 57.810 50.000 0.00 0.00 46.75 4.06
3183 3999 3.898123 TGGCTGTAGAATATGGAGAGACC 59.102 47.826 0.00 0.00 39.54 3.85
3184 4000 4.021544 CCTGGCTGTAGAATATGGAGAGAC 60.022 50.000 0.00 0.00 0.00 3.36
3185 4001 4.155709 CCTGGCTGTAGAATATGGAGAGA 58.844 47.826 0.00 0.00 0.00 3.10
3186 4002 3.306641 GCCTGGCTGTAGAATATGGAGAG 60.307 52.174 12.43 0.00 0.00 3.20
3187 4003 2.634940 GCCTGGCTGTAGAATATGGAGA 59.365 50.000 12.43 0.00 0.00 3.71
3188 4004 2.611473 CGCCTGGCTGTAGAATATGGAG 60.611 54.545 17.92 0.00 0.00 3.86
3189 4005 1.344438 CGCCTGGCTGTAGAATATGGA 59.656 52.381 17.92 0.00 0.00 3.41
3190 4006 1.070758 ACGCCTGGCTGTAGAATATGG 59.929 52.381 17.92 0.00 0.00 2.74
3191 4007 2.408050 GACGCCTGGCTGTAGAATATG 58.592 52.381 17.92 0.00 0.00 1.78
3192 4008 1.000163 CGACGCCTGGCTGTAGAATAT 60.000 52.381 17.92 0.00 0.00 1.28
3193 4009 0.384309 CGACGCCTGGCTGTAGAATA 59.616 55.000 17.92 0.00 0.00 1.75
3194 4010 1.141881 CGACGCCTGGCTGTAGAAT 59.858 57.895 17.92 0.00 0.00 2.40
3195 4011 2.571757 CGACGCCTGGCTGTAGAA 59.428 61.111 17.92 0.00 0.00 2.10
3196 4012 4.129737 GCGACGCCTGGCTGTAGA 62.130 66.667 17.92 0.00 0.00 2.59
3204 4020 4.072088 GTTTGGACGCGACGCCTG 62.072 66.667 15.93 3.43 0.00 4.85
3215 4031 0.540133 GGGTTTAAGGCCGGTTTGGA 60.540 55.000 1.90 0.00 42.00 3.53
3216 4032 0.541063 AGGGTTTAAGGCCGGTTTGG 60.541 55.000 1.90 0.00 42.50 3.28
3217 4033 0.885879 GAGGGTTTAAGGCCGGTTTG 59.114 55.000 1.90 0.00 0.00 2.93
3218 4034 0.607217 CGAGGGTTTAAGGCCGGTTT 60.607 55.000 1.90 0.27 0.00 3.27
3219 4035 1.002990 CGAGGGTTTAAGGCCGGTT 60.003 57.895 1.90 0.00 0.00 4.44
3220 4036 2.666812 CGAGGGTTTAAGGCCGGT 59.333 61.111 1.90 0.00 0.00 5.28
3221 4037 2.124860 CCGAGGGTTTAAGGCCGG 60.125 66.667 0.00 0.00 0.00 6.13
3222 4038 2.124860 CCCGAGGGTTTAAGGCCG 60.125 66.667 0.00 0.00 0.00 6.13
3223 4039 2.439701 GCCCGAGGGTTTAAGGCC 60.440 66.667 10.26 0.00 37.66 5.19
3224 4040 1.749258 CTGCCCGAGGGTTTAAGGC 60.749 63.158 10.26 0.00 44.13 4.35
3225 4041 1.749258 GCTGCCCGAGGGTTTAAGG 60.749 63.158 10.26 0.00 37.65 2.69
3226 4042 1.749258 GGCTGCCCGAGGGTTTAAG 60.749 63.158 7.66 4.30 37.65 1.85
3227 4043 2.353573 GGCTGCCCGAGGGTTTAA 59.646 61.111 7.66 0.00 37.65 1.52
3237 4053 1.072159 AATGATCTAGCGGCTGCCC 59.928 57.895 15.55 6.06 44.31 5.36
3238 4054 0.250038 TCAATGATCTAGCGGCTGCC 60.250 55.000 15.55 9.11 44.31 4.85
3239 4055 0.864455 GTCAATGATCTAGCGGCTGC 59.136 55.000 13.86 10.33 43.24 5.25
3240 4056 1.506493 GGTCAATGATCTAGCGGCTG 58.494 55.000 13.86 2.84 0.00 4.85
3241 4057 0.032678 CGGTCAATGATCTAGCGGCT 59.967 55.000 7.98 7.98 0.00 5.52
3242 4058 0.249489 ACGGTCAATGATCTAGCGGC 60.249 55.000 11.89 0.00 38.36 6.53
3243 4059 2.128035 GAACGGTCAATGATCTAGCGG 58.872 52.381 0.00 0.00 38.36 5.52
3244 4060 2.809446 TGAACGGTCAATGATCTAGCG 58.191 47.619 0.00 1.39 39.81 4.26
3245 4061 4.371786 TCATGAACGGTCAATGATCTAGC 58.628 43.478 7.51 0.00 37.30 3.42
3246 4062 7.488187 AAATCATGAACGGTCAATGATCTAG 57.512 36.000 21.01 2.43 37.30 2.43
3247 4063 7.864108 AAAATCATGAACGGTCAATGATCTA 57.136 32.000 21.01 3.01 37.30 1.98
3248 4064 6.764308 AAAATCATGAACGGTCAATGATCT 57.236 33.333 21.01 10.68 37.30 2.75
3269 4085 5.360144 TGTTTGAGACCCGTTTGGATAAAAA 59.640 36.000 0.00 0.00 37.49 1.94
3270 4086 4.888239 TGTTTGAGACCCGTTTGGATAAAA 59.112 37.500 0.00 0.00 37.49 1.52
3271 4087 4.462133 TGTTTGAGACCCGTTTGGATAAA 58.538 39.130 0.00 0.00 37.49 1.40
3272 4088 4.088056 TGTTTGAGACCCGTTTGGATAA 57.912 40.909 0.00 0.00 37.49 1.75
3273 4089 3.773418 TGTTTGAGACCCGTTTGGATA 57.227 42.857 0.00 0.00 37.49 2.59
3274 4090 2.649531 TGTTTGAGACCCGTTTGGAT 57.350 45.000 0.00 0.00 37.49 3.41
3275 4091 2.421751 TTGTTTGAGACCCGTTTGGA 57.578 45.000 0.00 0.00 37.49 3.53
3276 4092 2.621055 TCATTGTTTGAGACCCGTTTGG 59.379 45.455 0.00 0.00 41.37 3.28
3277 4093 3.980646 TCATTGTTTGAGACCCGTTTG 57.019 42.857 0.00 0.00 0.00 2.93
3287 4103 1.462616 CCATCCGCCTCATTGTTTGA 58.537 50.000 0.00 0.00 0.00 2.69
3288 4104 0.457035 CCCATCCGCCTCATTGTTTG 59.543 55.000 0.00 0.00 0.00 2.93
3289 4105 0.684153 CCCCATCCGCCTCATTGTTT 60.684 55.000 0.00 0.00 0.00 2.83
3290 4106 1.076777 CCCCATCCGCCTCATTGTT 60.077 57.895 0.00 0.00 0.00 2.83
3291 4107 2.597340 CCCCATCCGCCTCATTGT 59.403 61.111 0.00 0.00 0.00 2.71
3292 4108 2.908940 GCCCCATCCGCCTCATTG 60.909 66.667 0.00 0.00 0.00 2.82
3293 4109 4.569180 CGCCCCATCCGCCTCATT 62.569 66.667 0.00 0.00 0.00 2.57
3310 4126 1.744320 AAGTTTCAAACCGCCAGGGC 61.744 55.000 0.00 0.00 43.47 5.19
3311 4127 0.031994 CAAGTTTCAAACCGCCAGGG 59.968 55.000 0.00 0.00 43.47 4.45
3312 4128 0.744281 ACAAGTTTCAAACCGCCAGG 59.256 50.000 0.00 0.00 45.13 4.45
3313 4129 2.577449 AACAAGTTTCAAACCGCCAG 57.423 45.000 0.00 0.00 0.00 4.85
3314 4130 2.882324 GAAACAAGTTTCAAACCGCCA 58.118 42.857 18.09 0.00 46.03 5.69
3321 4137 9.730435 CGATCCAACGAAGGAAACAAGTTTCAA 62.730 40.741 22.72 2.37 41.92 2.69
3322 4138 8.369869 CGATCCAACGAAGGAAACAAGTTTCA 62.370 42.308 22.72 4.13 41.92 2.69
3323 4139 4.625972 TCCAACGAAGGAAACAAGTTTC 57.374 40.909 15.46 15.46 46.03 2.78
3324 4140 4.261031 CGATCCAACGAAGGAAACAAGTTT 60.261 41.667 4.80 0.00 41.92 2.66
3325 4141 3.250040 CGATCCAACGAAGGAAACAAGTT 59.750 43.478 4.80 0.00 41.92 2.66
3326 4142 2.806244 CGATCCAACGAAGGAAACAAGT 59.194 45.455 4.80 0.00 41.92 3.16
3327 4143 2.159627 CCGATCCAACGAAGGAAACAAG 59.840 50.000 4.80 0.00 41.92 3.16
3328 4144 2.147958 CCGATCCAACGAAGGAAACAA 58.852 47.619 4.80 0.00 41.92 2.83
3329 4145 1.071071 ACCGATCCAACGAAGGAAACA 59.929 47.619 4.80 0.00 41.92 2.83
3330 4146 1.463444 CACCGATCCAACGAAGGAAAC 59.537 52.381 4.80 2.66 41.92 2.78
3331 4147 1.609580 CCACCGATCCAACGAAGGAAA 60.610 52.381 4.80 0.00 41.92 3.13
3332 4148 0.036765 CCACCGATCCAACGAAGGAA 60.037 55.000 4.80 0.00 41.92 3.36
3333 4149 1.594833 CCACCGATCCAACGAAGGA 59.405 57.895 3.24 3.24 43.01 3.36
3334 4150 2.106683 GCCACCGATCCAACGAAGG 61.107 63.158 0.00 0.00 35.09 3.46
3335 4151 2.452813 CGCCACCGATCCAACGAAG 61.453 63.158 0.00 0.00 36.29 3.79
3336 4152 1.875420 TACGCCACCGATCCAACGAA 61.875 55.000 0.00 0.00 38.29 3.85
3337 4153 2.274232 CTACGCCACCGATCCAACGA 62.274 60.000 0.00 0.00 38.29 3.85
3338 4154 1.876714 CTACGCCACCGATCCAACG 60.877 63.158 0.00 0.00 38.29 4.10
3339 4155 2.171725 GCTACGCCACCGATCCAAC 61.172 63.158 0.00 0.00 38.29 3.77
3340 4156 2.185867 GCTACGCCACCGATCCAA 59.814 61.111 0.00 0.00 38.29 3.53
3341 4157 2.758327 AGCTACGCCACCGATCCA 60.758 61.111 0.00 0.00 38.29 3.41
3342 4158 2.027751 GAGCTACGCCACCGATCC 59.972 66.667 0.00 0.00 38.29 3.36
3343 4159 2.027751 GGAGCTACGCCACCGATC 59.972 66.667 0.00 0.00 38.29 3.69
3344 4160 3.900892 CGGAGCTACGCCACCGAT 61.901 66.667 4.83 0.00 45.93 4.18
3356 4172 4.849310 TATGCAACCCGCCGGAGC 62.849 66.667 5.05 6.46 41.33 4.70
3357 4173 2.588877 CTATGCAACCCGCCGGAG 60.589 66.667 5.05 0.00 41.33 4.63
3358 4174 3.395702 ACTATGCAACCCGCCGGA 61.396 61.111 5.05 0.00 41.33 5.14
3359 4175 3.202001 CACTATGCAACCCGCCGG 61.202 66.667 0.00 0.00 41.33 6.13
3360 4176 3.876198 GCACTATGCAACCCGCCG 61.876 66.667 0.00 0.00 44.26 6.46
3369 4185 0.397941 TGGATGGCTAGGCACTATGC 59.602 55.000 22.77 11.97 41.70 3.14
3370 4186 1.606480 CGTGGATGGCTAGGCACTATG 60.606 57.143 22.77 14.12 41.70 2.23
3371 4187 0.681733 CGTGGATGGCTAGGCACTAT 59.318 55.000 22.77 5.76 41.70 2.12
3372 4188 0.686441 ACGTGGATGGCTAGGCACTA 60.686 55.000 22.77 10.67 41.75 2.74
3373 4189 1.990060 ACGTGGATGGCTAGGCACT 60.990 57.895 22.77 10.89 46.37 4.40
3374 4190 1.815421 CACGTGGATGGCTAGGCAC 60.815 63.158 22.77 14.82 0.00 5.01
3375 4191 2.584064 CACGTGGATGGCTAGGCA 59.416 61.111 22.54 22.54 0.00 4.75
3376 4192 2.897350 GCACGTGGATGGCTAGGC 60.897 66.667 18.88 9.85 0.00 3.93
3377 4193 1.522355 CAGCACGTGGATGGCTAGG 60.522 63.158 18.88 0.00 35.82 3.02
3378 4194 2.176273 GCAGCACGTGGATGGCTAG 61.176 63.158 18.88 4.11 35.82 3.42
3379 4195 2.125147 GCAGCACGTGGATGGCTA 60.125 61.111 18.88 0.00 35.82 3.93
3380 4196 4.025858 AGCAGCACGTGGATGGCT 62.026 61.111 18.88 4.33 38.70 4.75
3381 4197 3.807538 CAGCAGCACGTGGATGGC 61.808 66.667 18.88 1.50 32.19 4.40
3382 4198 3.807538 GCAGCAGCACGTGGATGG 61.808 66.667 18.88 0.00 41.58 3.51
3383 4199 3.807538 GGCAGCAGCACGTGGATG 61.808 66.667 18.88 11.62 44.61 3.51
3384 4200 4.334118 TGGCAGCAGCACGTGGAT 62.334 61.111 18.88 0.00 44.61 3.41
3387 4203 2.340453 AAAAGTGGCAGCAGCACGTG 62.340 55.000 12.28 12.28 44.61 4.49
3388 4204 2.063541 GAAAAGTGGCAGCAGCACGT 62.064 55.000 2.65 0.00 44.61 4.49
3389 4205 1.370900 GAAAAGTGGCAGCAGCACG 60.371 57.895 2.65 0.00 44.61 5.34
3390 4206 1.006922 GGAAAAGTGGCAGCAGCAC 60.007 57.895 2.65 0.00 44.61 4.40
3391 4207 1.455402 TGGAAAAGTGGCAGCAGCA 60.455 52.632 2.65 0.00 44.61 4.41
3394 4210 0.823356 GGAGTGGAAAAGTGGCAGCA 60.823 55.000 0.00 0.00 0.00 4.41
3397 4213 0.467290 GGTGGAGTGGAAAAGTGGCA 60.467 55.000 0.00 0.00 0.00 4.92
3406 4222 0.188587 AGACAGACAGGTGGAGTGGA 59.811 55.000 0.00 0.00 0.00 4.02
3409 4225 2.982339 ACTAGACAGACAGGTGGAGT 57.018 50.000 0.00 0.00 0.00 3.85
3415 4231 2.223923 GCATGGCTACTAGACAGACAGG 60.224 54.545 10.86 10.86 36.17 4.00
3417 4233 1.757118 GGCATGGCTACTAGACAGACA 59.243 52.381 12.86 7.04 36.17 3.41
3419 4235 1.414158 GGGCATGGCTACTAGACAGA 58.586 55.000 19.78 0.00 36.17 3.41
3421 4237 1.054406 GGGGGCATGGCTACTAGACA 61.054 60.000 19.78 0.00 37.84 3.41
3423 4239 1.054406 GTGGGGGCATGGCTACTAGA 61.054 60.000 19.78 0.00 0.00 2.43
3447 4263 0.404040 AGAAATGGCTCGTTCCCCAA 59.596 50.000 0.00 0.00 34.25 4.12
3450 4270 1.664151 CGTTAGAAATGGCTCGTTCCC 59.336 52.381 0.00 0.00 0.00 3.97
3454 4274 0.036765 TGGCGTTAGAAATGGCTCGT 60.037 50.000 6.92 0.00 42.90 4.18
3545 4365 1.833630 TCTTTCGGATCCACTGCATCT 59.166 47.619 13.41 0.00 0.00 2.90
3552 4372 2.622436 CAACTCCTCTTTCGGATCCAC 58.378 52.381 13.41 0.00 31.43 4.02
3561 4381 2.909662 CCTCTTCCTCCAACTCCTCTTT 59.090 50.000 0.00 0.00 0.00 2.52
3562 4382 2.112691 TCCTCTTCCTCCAACTCCTCTT 59.887 50.000 0.00 0.00 0.00 2.85
3563 4383 1.719378 TCCTCTTCCTCCAACTCCTCT 59.281 52.381 0.00 0.00 0.00 3.69
3578 4398 1.076339 CTCCTTCGGCTCCTCCTCT 60.076 63.158 0.00 0.00 0.00 3.69
3587 4407 0.462759 CCACATCTTCCTCCTTCGGC 60.463 60.000 0.00 0.00 0.00 5.54
3588 4408 0.179000 CCCACATCTTCCTCCTTCGG 59.821 60.000 0.00 0.00 0.00 4.30
3589 4409 0.179000 CCCCACATCTTCCTCCTTCG 59.821 60.000 0.00 0.00 0.00 3.79
3590 4410 0.548510 CCCCCACATCTTCCTCCTTC 59.451 60.000 0.00 0.00 0.00 3.46
3591 4411 0.121197 TCCCCCACATCTTCCTCCTT 59.879 55.000 0.00 0.00 0.00 3.36
3599 4428 2.693864 CCCAGCTCCCCCACATCT 60.694 66.667 0.00 0.00 0.00 2.90
3623 4452 4.193334 TCCTGCAGATCCGCGTCG 62.193 66.667 17.39 0.00 33.35 5.12
3624 4453 2.279120 CTCCTGCAGATCCGCGTC 60.279 66.667 17.39 0.00 33.35 5.19
3625 4454 3.842923 CCTCCTGCAGATCCGCGT 61.843 66.667 17.39 0.00 33.35 6.01
3626 4455 3.496875 CTCCTCCTGCAGATCCGCG 62.497 68.421 17.39 0.00 33.35 6.46
3627 4456 2.420890 CTCCTCCTGCAGATCCGC 59.579 66.667 17.39 0.00 0.00 5.54
3628 4457 2.420890 GCTCCTCCTGCAGATCCG 59.579 66.667 17.39 0.00 0.00 4.18
3638 4467 3.771110 GATGGCCTGCTGCTCCTCC 62.771 68.421 3.32 0.00 40.92 4.30
3640 4469 3.806667 GGATGGCCTGCTGCTCCT 61.807 66.667 3.32 0.00 40.92 3.69
3669 4498 1.112916 TCTGCAACAGACTCCGACCA 61.113 55.000 0.00 0.00 35.39 4.02
3680 4509 0.243907 GACGTCTAGCCTCTGCAACA 59.756 55.000 8.70 0.00 41.13 3.33
3682 4511 1.135139 GATGACGTCTAGCCTCTGCAA 59.865 52.381 17.92 0.00 41.13 4.08
3686 4515 1.448922 GGCGATGACGTCTAGCCTCT 61.449 60.000 28.95 5.18 44.06 3.69
3692 4521 3.120979 CTGCCGGCGATGACGTCTA 62.121 63.158 23.90 3.52 42.31 2.59
3698 4527 2.839632 ATCTCCTGCCGGCGATGA 60.840 61.111 23.90 17.15 33.57 2.92
3700 4529 3.933722 CCATCTCCTGCCGGCGAT 61.934 66.667 23.90 15.45 35.13 4.58
3710 4539 4.166888 TGCTGCGCCTCCATCTCC 62.167 66.667 4.18 0.00 0.00 3.71
3733 4562 2.219325 GAGCATATCCGCCTCCTCCG 62.219 65.000 0.00 0.00 0.00 4.63
3752 4581 3.645212 ACTCCACCTCATCCATGTAGATG 59.355 47.826 5.79 5.79 44.21 2.90
3753 4582 3.933886 ACTCCACCTCATCCATGTAGAT 58.066 45.455 0.00 0.00 0.00 1.98
3754 4583 3.404869 ACTCCACCTCATCCATGTAGA 57.595 47.619 0.00 0.00 0.00 2.59
3759 4588 2.427002 CCTCCTACTCCACCTCATCCAT 60.427 54.545 0.00 0.00 0.00 3.41
3770 4599 1.337118 CTGGCTCATCCTCCTACTCC 58.663 60.000 0.00 0.00 35.26 3.85
3797 4644 2.271800 GAGATGTCCACAACGATGGTC 58.728 52.381 0.00 0.00 40.95 4.02
3822 4669 6.536447 ACTACTACCCTAGCTACTCTTCATC 58.464 44.000 0.00 0.00 0.00 2.92
3824 4671 5.972327 ACTACTACCCTAGCTACTCTTCA 57.028 43.478 0.00 0.00 0.00 3.02
3825 4672 7.066307 ACTACTACTACCCTAGCTACTCTTC 57.934 44.000 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.