Multiple sequence alignment - TraesCS5A01G455200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G455200 chr5A 100.000 2339 0 0 1 2339 635794533 635792195 0.000000e+00 4320
1 TraesCS5A01G455200 chr5A 85.965 114 11 5 1897 2006 635906018 635905906 1.470000e-22 117
2 TraesCS5A01G455200 chr2D 97.289 1365 35 2 1 1363 273017911 273019275 0.000000e+00 2314
3 TraesCS5A01G455200 chr2D 85.119 336 46 3 2008 2339 638386247 638385912 8.010000e-90 340
4 TraesCS5A01G455200 chr7D 97.285 1363 35 2 1 1362 232924947 232926308 0.000000e+00 2311
5 TraesCS5A01G455200 chr7D 97.001 1367 39 2 1 1366 149106978 149105613 0.000000e+00 2296
6 TraesCS5A01G455200 chr7D 96.845 1363 42 1 1 1362 497912483 497911121 0.000000e+00 2278
7 TraesCS5A01G455200 chr3D 96.843 1362 43 0 1 1362 87390036 87391397 0.000000e+00 2278
8 TraesCS5A01G455200 chr6A 96.708 1367 40 4 1 1366 35542452 35543814 0.000000e+00 2270
9 TraesCS5A01G455200 chr2A 96.557 1365 42 5 1 1362 742309307 742307945 0.000000e+00 2255
10 TraesCS5A01G455200 chr3B 92.862 1359 89 5 2 1358 418735711 418734359 0.000000e+00 1965
11 TraesCS5A01G455200 chr3B 85.843 332 43 3 2011 2338 749488642 749488973 1.330000e-92 350
12 TraesCS5A01G455200 chr4D 92.533 1366 93 8 1 1362 127148117 127149477 0.000000e+00 1949
13 TraesCS5A01G455200 chr4D 86.607 336 39 5 2008 2339 99207608 99207275 1.320000e-97 366
14 TraesCS5A01G455200 chr5B 87.791 344 28 7 1670 2002 638829100 638829440 7.840000e-105 390
15 TraesCS5A01G455200 chr5B 95.172 145 5 1 1531 1673 638797803 638797947 6.500000e-56 228
16 TraesCS5A01G455200 chr5B 95.652 115 3 1 1359 1471 638797614 638797728 1.430000e-42 183
17 TraesCS5A01G455200 chr5B 96.250 80 3 0 1377 1456 638829967 638830046 5.240000e-27 132
18 TraesCS5A01G455200 chr1D 86.747 332 40 3 2012 2339 418404825 418405156 1.320000e-97 366
19 TraesCS5A01G455200 chr1D 86.186 333 41 4 2011 2339 375352698 375353029 2.860000e-94 355
20 TraesCS5A01G455200 chr1D 85.119 336 46 2 2008 2339 469610143 469610478 8.010000e-90 340
21 TraesCS5A01G455200 chr4B 86.527 334 39 5 2011 2339 161559811 161559479 1.710000e-96 363
22 TraesCS5A01G455200 chr5D 85.586 333 44 3 2011 2339 485603323 485603655 1.720000e-91 346
23 TraesCS5A01G455200 chr7A 85.373 335 45 3 2009 2339 670686617 670686283 6.190000e-91 344


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G455200 chr5A 635792195 635794533 2338 True 4320 4320 100.0000 1 2339 1 chr5A.!!$R1 2338
1 TraesCS5A01G455200 chr2D 273017911 273019275 1364 False 2314 2314 97.2890 1 1363 1 chr2D.!!$F1 1362
2 TraesCS5A01G455200 chr7D 232924947 232926308 1361 False 2311 2311 97.2850 1 1362 1 chr7D.!!$F1 1361
3 TraesCS5A01G455200 chr7D 149105613 149106978 1365 True 2296 2296 97.0010 1 1366 1 chr7D.!!$R1 1365
4 TraesCS5A01G455200 chr7D 497911121 497912483 1362 True 2278 2278 96.8450 1 1362 1 chr7D.!!$R2 1361
5 TraesCS5A01G455200 chr3D 87390036 87391397 1361 False 2278 2278 96.8430 1 1362 1 chr3D.!!$F1 1361
6 TraesCS5A01G455200 chr6A 35542452 35543814 1362 False 2270 2270 96.7080 1 1366 1 chr6A.!!$F1 1365
7 TraesCS5A01G455200 chr2A 742307945 742309307 1362 True 2255 2255 96.5570 1 1362 1 chr2A.!!$R1 1361
8 TraesCS5A01G455200 chr3B 418734359 418735711 1352 True 1965 1965 92.8620 2 1358 1 chr3B.!!$R1 1356
9 TraesCS5A01G455200 chr4D 127148117 127149477 1360 False 1949 1949 92.5330 1 1362 1 chr4D.!!$F1 1361
10 TraesCS5A01G455200 chr5B 638829100 638830046 946 False 261 390 92.0205 1377 2002 2 chr5B.!!$F2 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
765 768 0.871722 TTCACTCAAAATGCGACCCG 59.128 50.0 0.0 0.0 0.0 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2193 2709 0.036294 AGGCCTTAGCACGACTTTCC 60.036 55.0 0.0 0.0 42.56 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 8.303876 GGGCATTTATTCTCAAAAGTTGTAGAA 58.696 33.333 0.00 0.00 34.10 2.10
205 206 5.480073 ACGGATTCTTTCAATCCCAATTTCA 59.520 36.000 7.62 0.00 42.46 2.69
311 312 5.132648 TGGAACTATCAGTATGGGAGCAAAT 59.867 40.000 0.00 0.00 36.16 2.32
483 484 2.972021 TGAAGATCTCACCCTTGTGTCA 59.028 45.455 0.00 0.00 43.26 3.58
765 768 0.871722 TTCACTCAAAATGCGACCCG 59.128 50.000 0.00 0.00 0.00 5.28
1151 1158 1.586042 CGGCGGCAATTTTCGATGG 60.586 57.895 10.53 0.00 0.00 3.51
1278 1286 2.946990 GACTTCGGTTTGGTTTGAGGAA 59.053 45.455 0.00 0.00 0.00 3.36
1379 1388 5.957842 AAAAACACGGCAAGAATAGATGA 57.042 34.783 0.00 0.00 0.00 2.92
1380 1389 5.551760 AAAACACGGCAAGAATAGATGAG 57.448 39.130 0.00 0.00 0.00 2.90
1381 1390 2.555199 ACACGGCAAGAATAGATGAGC 58.445 47.619 0.00 0.00 0.00 4.26
1382 1391 1.869767 CACGGCAAGAATAGATGAGCC 59.130 52.381 0.00 0.00 38.73 4.70
1383 1392 1.486310 ACGGCAAGAATAGATGAGCCA 59.514 47.619 0.00 0.00 42.10 4.75
1384 1393 2.092968 ACGGCAAGAATAGATGAGCCAA 60.093 45.455 0.00 0.00 42.10 4.52
1385 1394 2.945008 CGGCAAGAATAGATGAGCCAAA 59.055 45.455 0.00 0.00 42.10 3.28
1386 1395 3.567164 CGGCAAGAATAGATGAGCCAAAT 59.433 43.478 0.00 0.00 42.10 2.32
1387 1396 4.037208 CGGCAAGAATAGATGAGCCAAATT 59.963 41.667 0.00 0.00 42.10 1.82
1388 1397 5.287226 GGCAAGAATAGATGAGCCAAATTG 58.713 41.667 0.00 0.00 41.63 2.32
1389 1398 5.163478 GGCAAGAATAGATGAGCCAAATTGT 60.163 40.000 0.00 0.00 41.63 2.71
1390 1399 5.975939 GCAAGAATAGATGAGCCAAATTGTC 59.024 40.000 0.00 0.00 0.00 3.18
1391 1400 6.405065 GCAAGAATAGATGAGCCAAATTGTCA 60.405 38.462 0.00 0.00 0.00 3.58
1392 1401 6.690194 AGAATAGATGAGCCAAATTGTCAC 57.310 37.500 0.00 0.00 0.00 3.67
1393 1402 5.295292 AGAATAGATGAGCCAAATTGTCACG 59.705 40.000 0.00 0.00 0.00 4.35
1394 1403 1.470098 AGATGAGCCAAATTGTCACGC 59.530 47.619 0.00 0.00 0.00 5.34
1395 1404 1.199789 GATGAGCCAAATTGTCACGCA 59.800 47.619 0.00 0.00 0.00 5.24
1396 1405 1.246649 TGAGCCAAATTGTCACGCAT 58.753 45.000 0.00 0.00 0.00 4.73
1397 1406 1.068402 TGAGCCAAATTGTCACGCATG 60.068 47.619 0.00 0.00 0.00 4.06
1398 1407 0.388907 AGCCAAATTGTCACGCATGC 60.389 50.000 7.91 7.91 0.00 4.06
1399 1408 1.353609 GCCAAATTGTCACGCATGCC 61.354 55.000 13.15 0.00 0.00 4.40
1400 1409 0.038435 CCAAATTGTCACGCATGCCA 60.038 50.000 13.15 0.42 0.00 4.92
1401 1410 1.604947 CCAAATTGTCACGCATGCCAA 60.605 47.619 13.15 10.82 0.00 4.52
1402 1411 2.133553 CAAATTGTCACGCATGCCAAA 58.866 42.857 13.15 0.00 0.00 3.28
1403 1412 2.068837 AATTGTCACGCATGCCAAAG 57.931 45.000 13.15 0.00 0.00 2.77
1404 1413 0.388907 ATTGTCACGCATGCCAAAGC 60.389 50.000 13.15 0.00 40.48 3.51
1405 1414 1.454572 TTGTCACGCATGCCAAAGCT 61.455 50.000 13.15 0.00 40.80 3.74
1406 1415 1.443194 GTCACGCATGCCAAAGCTG 60.443 57.895 13.15 0.00 40.80 4.24
1407 1416 1.600356 TCACGCATGCCAAAGCTGA 60.600 52.632 13.15 0.63 40.80 4.26
1408 1417 0.961857 TCACGCATGCCAAAGCTGAT 60.962 50.000 13.15 0.00 40.80 2.90
1409 1418 0.800683 CACGCATGCCAAAGCTGATG 60.801 55.000 13.15 0.00 40.80 3.07
1410 1419 1.226859 CGCATGCCAAAGCTGATGG 60.227 57.895 13.15 13.28 40.80 3.51
1411 1420 1.659622 CGCATGCCAAAGCTGATGGA 61.660 55.000 20.18 7.85 40.56 3.41
1412 1421 0.102481 GCATGCCAAAGCTGATGGAG 59.898 55.000 20.18 10.98 40.56 3.86
1413 1422 1.471119 CATGCCAAAGCTGATGGAGT 58.529 50.000 20.18 6.74 40.56 3.85
1414 1423 1.404391 CATGCCAAAGCTGATGGAGTC 59.596 52.381 20.18 5.69 40.56 3.36
1415 1424 0.401356 TGCCAAAGCTGATGGAGTCA 59.599 50.000 20.18 7.92 40.56 3.41
1416 1425 1.202915 TGCCAAAGCTGATGGAGTCAA 60.203 47.619 20.18 0.32 40.56 3.18
1417 1426 2.097825 GCCAAAGCTGATGGAGTCAAT 58.902 47.619 20.18 0.00 40.56 2.57
1418 1427 2.098770 GCCAAAGCTGATGGAGTCAATC 59.901 50.000 20.18 0.00 40.56 2.67
1419 1428 3.618351 CCAAAGCTGATGGAGTCAATCT 58.382 45.455 12.44 0.00 40.56 2.40
1420 1429 4.774124 CCAAAGCTGATGGAGTCAATCTA 58.226 43.478 12.44 0.00 40.56 1.98
1421 1430 4.815308 CCAAAGCTGATGGAGTCAATCTAG 59.185 45.833 12.44 5.97 40.56 2.43
1422 1431 5.396101 CCAAAGCTGATGGAGTCAATCTAGA 60.396 44.000 12.44 0.00 40.56 2.43
1423 1432 5.946942 AAGCTGATGGAGTCAATCTAGAA 57.053 39.130 8.99 0.00 36.14 2.10
1424 1433 5.275067 AGCTGATGGAGTCAATCTAGAAC 57.725 43.478 8.99 0.00 36.14 3.01
1425 1434 4.961730 AGCTGATGGAGTCAATCTAGAACT 59.038 41.667 8.99 0.00 36.14 3.01
1426 1435 6.132658 AGCTGATGGAGTCAATCTAGAACTA 58.867 40.000 8.99 0.00 36.14 2.24
1427 1436 6.265196 AGCTGATGGAGTCAATCTAGAACTAG 59.735 42.308 8.99 2.77 36.14 2.57
1428 1437 6.264292 GCTGATGGAGTCAATCTAGAACTAGA 59.736 42.308 12.92 12.92 38.32 2.43
1429 1438 7.201866 GCTGATGGAGTCAATCTAGAACTAGAA 60.202 40.741 14.25 0.00 37.91 2.10
1430 1439 8.774546 TGATGGAGTCAATCTAGAACTAGAAT 57.225 34.615 14.25 4.86 44.44 2.40
1431 1440 8.855110 TGATGGAGTCAATCTAGAACTAGAATC 58.145 37.037 14.25 10.62 44.44 2.52
1432 1441 8.774546 ATGGAGTCAATCTAGAACTAGAATCA 57.225 34.615 14.25 2.77 44.44 2.57
1433 1442 8.595362 TGGAGTCAATCTAGAACTAGAATCAA 57.405 34.615 14.25 0.00 44.44 2.57
1434 1443 9.035890 TGGAGTCAATCTAGAACTAGAATCAAA 57.964 33.333 14.25 0.00 44.44 2.69
1435 1444 9.528018 GGAGTCAATCTAGAACTAGAATCAAAG 57.472 37.037 14.25 0.00 44.44 2.77
1438 1447 9.862371 GTCAATCTAGAACTAGAATCAAAGACA 57.138 33.333 14.25 0.00 44.44 3.41
1440 1449 9.311916 CAATCTAGAACTAGAATCAAAGACAGG 57.688 37.037 14.25 0.00 44.44 4.00
1441 1450 6.868622 TCTAGAACTAGAATCAAAGACAGGC 58.131 40.000 8.83 0.00 39.08 4.85
1442 1451 4.837972 AGAACTAGAATCAAAGACAGGCC 58.162 43.478 0.00 0.00 0.00 5.19
1443 1452 4.287067 AGAACTAGAATCAAAGACAGGCCA 59.713 41.667 5.01 0.00 0.00 5.36
1444 1453 4.213564 ACTAGAATCAAAGACAGGCCAG 57.786 45.455 5.01 0.00 0.00 4.85
1445 1454 3.584848 ACTAGAATCAAAGACAGGCCAGT 59.415 43.478 5.01 1.34 0.00 4.00
1446 1455 2.787994 AGAATCAAAGACAGGCCAGTG 58.212 47.619 5.09 0.00 0.00 3.66
1447 1456 2.107204 AGAATCAAAGACAGGCCAGTGT 59.893 45.455 5.09 0.00 0.00 3.55
1448 1457 2.664402 ATCAAAGACAGGCCAGTGTT 57.336 45.000 5.09 4.87 0.00 3.32
1449 1458 2.435372 TCAAAGACAGGCCAGTGTTT 57.565 45.000 16.46 16.46 35.64 2.83
1450 1459 2.733956 TCAAAGACAGGCCAGTGTTTT 58.266 42.857 19.11 10.39 33.32 2.43
1451 1460 3.892284 TCAAAGACAGGCCAGTGTTTTA 58.108 40.909 19.11 10.25 33.32 1.52
1452 1461 3.630312 TCAAAGACAGGCCAGTGTTTTAC 59.370 43.478 19.11 0.00 33.32 2.01
1453 1462 3.577805 AAGACAGGCCAGTGTTTTACT 57.422 42.857 5.09 0.00 41.36 2.24
1454 1463 3.577805 AGACAGGCCAGTGTTTTACTT 57.422 42.857 5.09 0.00 37.60 2.24
1455 1464 3.214328 AGACAGGCCAGTGTTTTACTTG 58.786 45.455 5.09 0.00 37.60 3.16
1456 1465 1.681264 ACAGGCCAGTGTTTTACTTGC 59.319 47.619 5.01 0.00 44.92 4.01
1457 1466 1.680735 CAGGCCAGTGTTTTACTTGCA 59.319 47.619 5.01 0.00 46.84 4.08
1458 1467 1.956477 AGGCCAGTGTTTTACTTGCAG 59.044 47.619 5.01 0.00 46.84 4.41
1459 1468 1.000274 GGCCAGTGTTTTACTTGCAGG 60.000 52.381 0.00 0.00 46.84 4.85
1460 1469 1.000274 GCCAGTGTTTTACTTGCAGGG 60.000 52.381 0.00 0.00 44.98 4.45
1461 1470 1.613437 CCAGTGTTTTACTTGCAGGGG 59.387 52.381 0.00 0.00 37.60 4.79
1462 1471 2.582052 CAGTGTTTTACTTGCAGGGGA 58.418 47.619 0.00 0.00 37.60 4.81
1463 1472 2.293399 CAGTGTTTTACTTGCAGGGGAC 59.707 50.000 0.00 0.00 37.60 4.46
1464 1473 1.265905 GTGTTTTACTTGCAGGGGACG 59.734 52.381 0.00 0.00 0.00 4.79
1465 1474 0.879090 GTTTTACTTGCAGGGGACGG 59.121 55.000 0.00 0.00 0.00 4.79
1473 1482 4.096003 CAGGGGACGGCCGACAAT 62.096 66.667 35.90 9.58 33.83 2.71
1474 1483 2.364579 AGGGGACGGCCGACAATA 60.365 61.111 35.90 0.00 33.83 1.90
1475 1484 1.991167 AGGGGACGGCCGACAATAA 60.991 57.895 35.90 0.00 33.83 1.40
1476 1485 1.078285 GGGGACGGCCGACAATAAA 60.078 57.895 35.90 0.00 33.83 1.40
1477 1486 0.677414 GGGGACGGCCGACAATAAAA 60.677 55.000 35.90 0.00 33.83 1.52
1478 1487 1.385528 GGGACGGCCGACAATAAAAT 58.614 50.000 35.90 5.18 33.83 1.82
1479 1488 1.332686 GGGACGGCCGACAATAAAATC 59.667 52.381 35.90 15.50 33.83 2.17
1480 1489 2.011222 GGACGGCCGACAATAAAATCA 58.989 47.619 35.90 0.00 0.00 2.57
1481 1490 2.420722 GGACGGCCGACAATAAAATCAA 59.579 45.455 35.90 0.00 0.00 2.57
1482 1491 3.486875 GGACGGCCGACAATAAAATCAAG 60.487 47.826 35.90 0.00 0.00 3.02
1483 1492 3.340034 ACGGCCGACAATAAAATCAAGA 58.660 40.909 35.90 0.00 0.00 3.02
1484 1493 3.754323 ACGGCCGACAATAAAATCAAGAA 59.246 39.130 35.90 0.00 0.00 2.52
1485 1494 4.142687 ACGGCCGACAATAAAATCAAGAAG 60.143 41.667 35.90 0.00 0.00 2.85
1486 1495 4.105486 GGCCGACAATAAAATCAAGAAGC 58.895 43.478 0.00 0.00 0.00 3.86
1487 1496 4.142381 GGCCGACAATAAAATCAAGAAGCT 60.142 41.667 0.00 0.00 0.00 3.74
1488 1497 5.402398 GCCGACAATAAAATCAAGAAGCTT 58.598 37.500 0.00 0.00 0.00 3.74
1489 1498 5.863935 GCCGACAATAAAATCAAGAAGCTTT 59.136 36.000 0.00 0.00 0.00 3.51
1490 1499 6.366061 GCCGACAATAAAATCAAGAAGCTTTT 59.634 34.615 0.00 0.00 31.17 2.27
1491 1500 7.410835 GCCGACAATAAAATCAAGAAGCTTTTC 60.411 37.037 0.00 0.00 29.23 2.29
1492 1501 7.062255 CCGACAATAAAATCAAGAAGCTTTTCC 59.938 37.037 0.00 0.00 29.23 3.13
1493 1502 7.594758 CGACAATAAAATCAAGAAGCTTTTCCA 59.405 33.333 0.00 0.00 29.23 3.53
1494 1503 8.593492 ACAATAAAATCAAGAAGCTTTTCCAC 57.407 30.769 0.00 0.00 29.23 4.02
1495 1504 7.382218 ACAATAAAATCAAGAAGCTTTTCCACG 59.618 33.333 0.00 0.00 29.23 4.94
1496 1505 2.997485 ATCAAGAAGCTTTTCCACGC 57.003 45.000 0.00 0.00 0.00 5.34
1497 1506 1.674359 TCAAGAAGCTTTTCCACGCA 58.326 45.000 0.00 0.00 0.00 5.24
1498 1507 2.020720 TCAAGAAGCTTTTCCACGCAA 58.979 42.857 0.00 0.00 0.00 4.85
1499 1508 2.425312 TCAAGAAGCTTTTCCACGCAAA 59.575 40.909 0.00 0.00 0.00 3.68
1500 1509 3.119316 TCAAGAAGCTTTTCCACGCAAAA 60.119 39.130 0.00 0.00 0.00 2.44
1501 1510 3.518634 AGAAGCTTTTCCACGCAAAAA 57.481 38.095 0.00 0.00 0.00 1.94
1522 1531 4.918810 AAAATCAAGAAGCTTCAACGGT 57.081 36.364 27.57 9.31 0.00 4.83
1523 1532 4.489679 AAATCAAGAAGCTTCAACGGTC 57.510 40.909 27.57 0.00 0.00 4.79
1524 1533 2.613026 TCAAGAAGCTTCAACGGTCA 57.387 45.000 27.57 2.04 0.00 4.02
1525 1534 3.126001 TCAAGAAGCTTCAACGGTCAT 57.874 42.857 27.57 1.82 0.00 3.06
1526 1535 3.067106 TCAAGAAGCTTCAACGGTCATC 58.933 45.455 27.57 0.00 0.00 2.92
1527 1536 2.100605 AGAAGCTTCAACGGTCATCC 57.899 50.000 27.57 0.00 0.00 3.51
1528 1537 1.625818 AGAAGCTTCAACGGTCATCCT 59.374 47.619 27.57 0.00 0.00 3.24
1529 1538 1.734465 GAAGCTTCAACGGTCATCCTG 59.266 52.381 21.67 0.00 0.00 3.86
1530 1539 0.036010 AGCTTCAACGGTCATCCTGG 60.036 55.000 0.00 0.00 0.00 4.45
1531 1540 1.026718 GCTTCAACGGTCATCCTGGG 61.027 60.000 0.00 0.00 0.00 4.45
1532 1541 0.613260 CTTCAACGGTCATCCTGGGA 59.387 55.000 0.00 0.00 0.00 4.37
1533 1542 1.210478 CTTCAACGGTCATCCTGGGAT 59.790 52.381 0.00 0.00 34.81 3.85
1534 1543 0.830648 TCAACGGTCATCCTGGGATC 59.169 55.000 0.00 0.00 31.62 3.36
1535 1544 0.541392 CAACGGTCATCCTGGGATCA 59.459 55.000 0.00 0.00 31.62 2.92
1536 1545 1.141657 CAACGGTCATCCTGGGATCAT 59.858 52.381 0.00 0.00 31.62 2.45
1537 1546 1.511613 ACGGTCATCCTGGGATCATT 58.488 50.000 0.00 0.00 31.62 2.57
1538 1547 1.846439 ACGGTCATCCTGGGATCATTT 59.154 47.619 0.00 0.00 31.62 2.32
1539 1548 2.242196 ACGGTCATCCTGGGATCATTTT 59.758 45.455 0.00 0.00 31.62 1.82
1540 1549 3.290710 CGGTCATCCTGGGATCATTTTT 58.709 45.455 0.00 0.00 31.62 1.94
1541 1550 3.067180 CGGTCATCCTGGGATCATTTTTG 59.933 47.826 0.00 0.00 31.62 2.44
1542 1551 4.026052 GGTCATCCTGGGATCATTTTTGT 58.974 43.478 0.00 0.00 31.62 2.83
1543 1552 5.200483 GGTCATCCTGGGATCATTTTTGTA 58.800 41.667 0.00 0.00 31.62 2.41
1544 1553 5.835280 GGTCATCCTGGGATCATTTTTGTAT 59.165 40.000 0.00 0.00 31.62 2.29
1545 1554 6.324770 GGTCATCCTGGGATCATTTTTGTATT 59.675 38.462 0.00 0.00 31.62 1.89
1546 1555 7.147672 GGTCATCCTGGGATCATTTTTGTATTT 60.148 37.037 0.00 0.00 31.62 1.40
1547 1556 8.260114 GTCATCCTGGGATCATTTTTGTATTTT 58.740 33.333 0.00 0.00 31.62 1.82
1548 1557 8.259411 TCATCCTGGGATCATTTTTGTATTTTG 58.741 33.333 0.00 0.00 31.62 2.44
1549 1558 7.552050 TCCTGGGATCATTTTTGTATTTTGT 57.448 32.000 0.00 0.00 0.00 2.83
1550 1559 8.657387 TCCTGGGATCATTTTTGTATTTTGTA 57.343 30.769 0.00 0.00 0.00 2.41
1551 1560 9.094578 TCCTGGGATCATTTTTGTATTTTGTAA 57.905 29.630 0.00 0.00 0.00 2.41
1552 1561 9.150348 CCTGGGATCATTTTTGTATTTTGTAAC 57.850 33.333 0.00 0.00 0.00 2.50
1553 1562 9.150348 CTGGGATCATTTTTGTATTTTGTAACC 57.850 33.333 0.00 0.00 0.00 2.85
1554 1563 8.875168 TGGGATCATTTTTGTATTTTGTAACCT 58.125 29.630 0.00 0.00 0.00 3.50
1555 1564 9.719355 GGGATCATTTTTGTATTTTGTAACCTT 57.281 29.630 0.00 0.00 0.00 3.50
1583 1592 8.842358 TTATGAGTTTTCGTTGATTTCCTAGT 57.158 30.769 0.00 0.00 0.00 2.57
1584 1593 9.932207 TTATGAGTTTTCGTTGATTTCCTAGTA 57.068 29.630 0.00 0.00 0.00 1.82
1585 1594 7.647907 TGAGTTTTCGTTGATTTCCTAGTAC 57.352 36.000 0.00 0.00 0.00 2.73
1586 1595 7.439381 TGAGTTTTCGTTGATTTCCTAGTACT 58.561 34.615 0.00 0.00 0.00 2.73
1587 1596 7.929785 TGAGTTTTCGTTGATTTCCTAGTACTT 59.070 33.333 0.00 0.00 0.00 2.24
1588 1597 8.672823 AGTTTTCGTTGATTTCCTAGTACTTT 57.327 30.769 0.00 0.00 0.00 2.66
1589 1598 9.117183 AGTTTTCGTTGATTTCCTAGTACTTTT 57.883 29.630 0.00 0.00 0.00 2.27
1590 1599 9.378597 GTTTTCGTTGATTTCCTAGTACTTTTC 57.621 33.333 0.00 0.00 0.00 2.29
1591 1600 8.897872 TTTCGTTGATTTCCTAGTACTTTTCT 57.102 30.769 0.00 0.00 0.00 2.52
1592 1601 8.897872 TTCGTTGATTTCCTAGTACTTTTCTT 57.102 30.769 0.00 0.00 0.00 2.52
1593 1602 8.897872 TCGTTGATTTCCTAGTACTTTTCTTT 57.102 30.769 0.00 0.00 0.00 2.52
1594 1603 8.770828 TCGTTGATTTCCTAGTACTTTTCTTTG 58.229 33.333 0.00 0.00 0.00 2.77
1595 1604 7.534239 CGTTGATTTCCTAGTACTTTTCTTTGC 59.466 37.037 0.00 0.00 0.00 3.68
1596 1605 7.129109 TGATTTCCTAGTACTTTTCTTTGCG 57.871 36.000 0.00 0.00 0.00 4.85
1597 1606 5.934935 TTTCCTAGTACTTTTCTTTGCGG 57.065 39.130 0.00 0.00 0.00 5.69
1598 1607 4.612264 TCCTAGTACTTTTCTTTGCGGT 57.388 40.909 0.00 0.00 0.00 5.68
1599 1608 4.563061 TCCTAGTACTTTTCTTTGCGGTC 58.437 43.478 0.00 0.00 0.00 4.79
1600 1609 4.039488 TCCTAGTACTTTTCTTTGCGGTCA 59.961 41.667 0.00 0.00 0.00 4.02
1601 1610 4.389077 CCTAGTACTTTTCTTTGCGGTCAG 59.611 45.833 0.00 0.00 0.00 3.51
1614 1623 2.084610 CGGTCAGCAGACTCAAATGA 57.915 50.000 9.29 0.00 44.36 2.57
1615 1624 2.416747 CGGTCAGCAGACTCAAATGAA 58.583 47.619 9.29 0.00 44.36 2.57
1616 1625 3.005554 CGGTCAGCAGACTCAAATGAAT 58.994 45.455 9.29 0.00 44.36 2.57
1617 1626 3.438087 CGGTCAGCAGACTCAAATGAATT 59.562 43.478 9.29 0.00 44.36 2.17
1618 1627 4.670992 CGGTCAGCAGACTCAAATGAATTG 60.671 45.833 9.29 0.00 44.36 2.32
1619 1628 4.456911 GGTCAGCAGACTCAAATGAATTGA 59.543 41.667 9.29 0.00 45.23 2.57
1620 1629 5.125097 GGTCAGCAGACTCAAATGAATTGAT 59.875 40.000 9.29 0.00 46.62 2.57
1621 1630 6.349944 GGTCAGCAGACTCAAATGAATTGATT 60.350 38.462 9.29 0.00 46.62 2.57
1622 1631 7.088905 GTCAGCAGACTCAAATGAATTGATTT 58.911 34.615 1.35 0.00 46.62 2.17
1623 1632 8.239314 GTCAGCAGACTCAAATGAATTGATTTA 58.761 33.333 2.40 0.00 46.62 1.40
1624 1633 8.239314 TCAGCAGACTCAAATGAATTGATTTAC 58.761 33.333 2.40 0.00 46.62 2.01
1625 1634 7.487189 CAGCAGACTCAAATGAATTGATTTACC 59.513 37.037 2.40 0.00 46.62 2.85
1626 1635 7.395489 AGCAGACTCAAATGAATTGATTTACCT 59.605 33.333 2.40 0.00 46.62 3.08
1627 1636 8.677300 GCAGACTCAAATGAATTGATTTACCTA 58.323 33.333 2.40 0.00 46.62 3.08
1646 1655 9.697990 TTTACCTAAACTTTAAAAAGGAGGACA 57.302 29.630 19.19 9.37 40.31 4.02
1647 1656 9.871175 TTACCTAAACTTTAAAAAGGAGGACAT 57.129 29.630 19.19 7.00 40.31 3.06
1648 1657 8.178313 ACCTAAACTTTAAAAAGGAGGACATG 57.822 34.615 19.19 0.00 40.31 3.21
1649 1658 7.090808 CCTAAACTTTAAAAAGGAGGACATGC 58.909 38.462 7.34 0.00 40.31 4.06
1650 1659 6.731292 AAACTTTAAAAAGGAGGACATGCT 57.269 33.333 7.34 0.00 40.31 3.79
1651 1660 5.712152 ACTTTAAAAAGGAGGACATGCTG 57.288 39.130 7.34 0.00 40.31 4.41
1652 1661 4.524328 ACTTTAAAAAGGAGGACATGCTGG 59.476 41.667 7.34 0.00 40.31 4.85
1653 1662 1.260544 AAAAAGGAGGACATGCTGGC 58.739 50.000 0.00 0.00 0.00 4.85
1654 1663 0.407139 AAAAGGAGGACATGCTGGCT 59.593 50.000 0.00 0.00 0.00 4.75
1655 1664 0.323178 AAAGGAGGACATGCTGGCTG 60.323 55.000 0.00 0.00 0.00 4.85
1656 1665 2.827642 GGAGGACATGCTGGCTGC 60.828 66.667 9.67 9.67 43.25 5.25
1657 1666 2.271497 GAGGACATGCTGGCTGCT 59.729 61.111 17.45 0.00 43.37 4.24
1658 1667 2.045242 AGGACATGCTGGCTGCTG 60.045 61.111 17.45 14.26 43.37 4.41
1659 1668 2.045634 GGACATGCTGGCTGCTGA 60.046 61.111 17.45 0.00 43.37 4.26
1660 1669 2.113433 GGACATGCTGGCTGCTGAG 61.113 63.158 17.45 9.35 43.37 3.35
1661 1670 1.376942 GACATGCTGGCTGCTGAGT 60.377 57.895 17.45 12.28 43.37 3.41
1662 1671 1.367599 GACATGCTGGCTGCTGAGTC 61.368 60.000 17.45 16.40 43.37 3.36
1663 1672 1.078356 CATGCTGGCTGCTGAGTCT 60.078 57.895 17.45 0.00 43.37 3.24
1664 1673 0.177373 CATGCTGGCTGCTGAGTCTA 59.823 55.000 17.45 0.00 43.37 2.59
1665 1674 0.177604 ATGCTGGCTGCTGAGTCTAC 59.822 55.000 17.45 0.00 43.37 2.59
1666 1675 1.187567 TGCTGGCTGCTGAGTCTACA 61.188 55.000 17.45 0.00 43.37 2.74
1667 1676 0.739112 GCTGGCTGCTGAGTCTACAC 60.739 60.000 9.31 0.00 38.95 2.90
1668 1677 0.457509 CTGGCTGCTGAGTCTACACG 60.458 60.000 0.00 0.00 0.00 4.49
1669 1678 1.179174 TGGCTGCTGAGTCTACACGT 61.179 55.000 0.00 0.00 0.00 4.49
1670 1679 0.038159 GGCTGCTGAGTCTACACGTT 60.038 55.000 0.00 0.00 0.00 3.99
1671 1680 1.201647 GGCTGCTGAGTCTACACGTTA 59.798 52.381 0.00 0.00 0.00 3.18
1672 1681 2.520979 GCTGCTGAGTCTACACGTTAG 58.479 52.381 0.00 0.00 0.00 2.34
1673 1682 2.520979 CTGCTGAGTCTACACGTTAGC 58.479 52.381 0.00 0.00 0.00 3.09
1681 1690 3.884091 AGTCTACACGTTAGCCTATCCAG 59.116 47.826 0.00 0.00 0.00 3.86
1690 1699 4.804139 CGTTAGCCTATCCAGTTTACACAG 59.196 45.833 0.00 0.00 0.00 3.66
1695 1704 5.070580 AGCCTATCCAGTTTACACAGTATCC 59.929 44.000 0.00 0.00 0.00 2.59
1701 1710 4.695455 CCAGTTTACACAGTATCCAACCTG 59.305 45.833 0.00 0.00 0.00 4.00
1709 1718 5.418209 ACACAGTATCCAACCTGACTAGTAC 59.582 44.000 0.00 0.00 0.00 2.73
1728 1737 0.939577 CGCGATGGTATCAGGTTCCG 60.940 60.000 0.00 0.00 0.00 4.30
1740 1749 2.328099 GGTTCCGAAGTGCCAGCTG 61.328 63.158 6.78 6.78 0.00 4.24
1766 1775 5.405935 TGATAGGACCATATGTTCCATCG 57.594 43.478 20.30 0.00 0.00 3.84
1793 1802 9.976255 TGCTTACACATGTTATATTCGTTAAAC 57.024 29.630 0.00 0.00 0.00 2.01
1813 1823 9.268255 GTTAAACAAAACTAAACAACCAAATGC 57.732 29.630 0.00 0.00 0.00 3.56
1814 1824 5.710613 ACAAAACTAAACAACCAAATGCG 57.289 34.783 0.00 0.00 0.00 4.73
1822 1832 1.683917 ACAACCAAATGCGCCAAAGTA 59.316 42.857 4.18 0.00 0.00 2.24
1823 1833 2.288152 ACAACCAAATGCGCCAAAGTAG 60.288 45.455 4.18 0.00 0.00 2.57
1829 1839 3.698029 AATGCGCCAAAGTAGCTAATG 57.302 42.857 4.18 0.00 0.00 1.90
1836 1846 3.378427 GCCAAAGTAGCTAATGGGTCAAG 59.622 47.826 18.23 0.00 33.45 3.02
1850 1860 4.624015 TGGGTCAAGTAGTTAAACTCGTG 58.376 43.478 0.00 0.00 0.00 4.35
1856 1866 3.303406 AGTAGTTAAACTCGTGCGTCAC 58.697 45.455 0.00 0.58 0.00 3.67
1858 1868 0.509929 GTTAAACTCGTGCGTCACCC 59.490 55.000 4.73 0.00 0.00 4.61
1871 1881 1.604693 CGTCACCCTGTGGTACTGAAC 60.605 57.143 0.00 0.00 45.57 3.18
1917 1927 4.999950 AGAGAAGTAGCTTGGTTGACATTG 59.000 41.667 0.00 0.00 0.00 2.82
1921 1931 6.770785 AGAAGTAGCTTGGTTGACATTGTTAA 59.229 34.615 0.00 0.00 0.00 2.01
1946 1957 9.933723 AATTCACTCATTTATCTTTTGGGAAAG 57.066 29.630 0.00 0.00 42.92 2.62
1948 1959 5.801947 CACTCATTTATCTTTTGGGAAAGCG 59.198 40.000 0.00 0.00 41.63 4.68
1966 1977 3.343617 AGCGGAAAAAGTAGCTAATGCA 58.656 40.909 0.00 0.00 42.74 3.96
1967 1978 3.756434 AGCGGAAAAAGTAGCTAATGCAA 59.244 39.130 0.00 0.00 42.74 4.08
1968 1979 3.851969 GCGGAAAAAGTAGCTAATGCAAC 59.148 43.478 0.00 0.00 42.74 4.17
1969 1980 4.614993 GCGGAAAAAGTAGCTAATGCAACA 60.615 41.667 0.00 0.00 42.74 3.33
1970 1981 5.640732 CGGAAAAAGTAGCTAATGCAACAT 58.359 37.500 0.00 0.00 42.74 2.71
1971 1982 5.512788 CGGAAAAAGTAGCTAATGCAACATG 59.487 40.000 0.00 0.00 42.74 3.21
1973 1984 7.090173 GGAAAAAGTAGCTAATGCAACATGAA 58.910 34.615 0.00 0.00 42.74 2.57
1974 1985 7.598493 GGAAAAAGTAGCTAATGCAACATGAAA 59.402 33.333 0.00 0.00 42.74 2.69
1981 2000 4.622740 GCTAATGCAACATGAAAAGACACC 59.377 41.667 0.00 0.00 39.41 4.16
1993 2012 0.601311 AAGACACCGCACAAGCTCTC 60.601 55.000 0.00 0.00 39.10 3.20
2002 2021 3.374988 CCGCACAAGCTCTCATGATAAAA 59.625 43.478 0.00 0.00 39.10 1.52
2030 2491 9.981114 AAATCAGGAAACTTTCGTTTTATTCAT 57.019 25.926 0.00 0.00 43.09 2.57
2031 2492 9.626045 AATCAGGAAACTTTCGTTTTATTCATC 57.374 29.630 0.00 0.00 43.09 2.92
2032 2493 8.391075 TCAGGAAACTTTCGTTTTATTCATCT 57.609 30.769 0.00 0.00 43.09 2.90
2033 2494 8.846211 TCAGGAAACTTTCGTTTTATTCATCTT 58.154 29.630 0.00 0.00 43.09 2.40
2034 2495 9.463443 CAGGAAACTTTCGTTTTATTCATCTTT 57.537 29.630 0.00 0.00 43.09 2.52
2094 2610 9.699410 AAAAATTACATCCAGATTCATAGACCA 57.301 29.630 0.00 0.00 0.00 4.02
2095 2611 8.682936 AAATTACATCCAGATTCATAGACCAC 57.317 34.615 0.00 0.00 0.00 4.16
2097 2613 4.302067 ACATCCAGATTCATAGACCACCT 58.698 43.478 0.00 0.00 0.00 4.00
2098 2614 4.102210 ACATCCAGATTCATAGACCACCTG 59.898 45.833 0.00 0.00 0.00 4.00
2100 2616 2.486191 CCAGATTCATAGACCACCTGGC 60.486 54.545 0.00 0.00 39.32 4.85
2101 2617 2.171237 CAGATTCATAGACCACCTGGCA 59.829 50.000 0.00 0.00 39.32 4.92
2102 2618 2.846206 AGATTCATAGACCACCTGGCAA 59.154 45.455 0.00 0.00 39.32 4.52
2103 2619 2.787473 TTCATAGACCACCTGGCAAG 57.213 50.000 0.00 0.00 39.32 4.01
2114 2630 3.631453 CTGGCAAGGACTACAAGCA 57.369 52.632 0.00 0.00 0.00 3.91
2115 2631 2.119801 CTGGCAAGGACTACAAGCAT 57.880 50.000 0.00 0.00 0.00 3.79
2116 2632 2.440409 CTGGCAAGGACTACAAGCATT 58.560 47.619 0.00 0.00 0.00 3.56
2130 2646 2.680312 AGCATTGAAGCGAGCTAAGA 57.320 45.000 0.00 0.00 40.15 2.10
2131 2647 2.275318 AGCATTGAAGCGAGCTAAGAC 58.725 47.619 0.00 0.00 40.15 3.01
2132 2648 2.093764 AGCATTGAAGCGAGCTAAGACT 60.094 45.455 0.00 0.00 40.15 3.24
2133 2649 2.283884 GCATTGAAGCGAGCTAAGACTC 59.716 50.000 0.00 0.00 0.00 3.36
2140 2656 2.654939 GAGCTAAGACTCGTTGCCG 58.345 57.895 0.00 0.00 0.00 5.69
2141 2657 0.109226 GAGCTAAGACTCGTTGCCGT 60.109 55.000 0.00 0.00 35.01 5.68
2142 2658 0.109226 AGCTAAGACTCGTTGCCGTC 60.109 55.000 0.00 0.00 35.01 4.79
2143 2659 0.388134 GCTAAGACTCGTTGCCGTCA 60.388 55.000 0.00 0.00 35.01 4.35
2144 2660 1.736032 GCTAAGACTCGTTGCCGTCAT 60.736 52.381 0.00 0.00 35.01 3.06
2145 2661 2.186076 CTAAGACTCGTTGCCGTCATC 58.814 52.381 0.00 0.00 35.01 2.92
2146 2662 0.603569 AAGACTCGTTGCCGTCATCT 59.396 50.000 0.00 0.00 35.01 2.90
2147 2663 0.171455 AGACTCGTTGCCGTCATCTC 59.829 55.000 0.00 0.00 35.01 2.75
2148 2664 0.802607 GACTCGTTGCCGTCATCTCC 60.803 60.000 0.00 0.00 35.01 3.71
2149 2665 1.251527 ACTCGTTGCCGTCATCTCCT 61.252 55.000 0.00 0.00 35.01 3.69
2150 2666 0.526524 CTCGTTGCCGTCATCTCCTC 60.527 60.000 0.00 0.00 35.01 3.71
2151 2667 0.965866 TCGTTGCCGTCATCTCCTCT 60.966 55.000 0.00 0.00 35.01 3.69
2152 2668 0.526524 CGTTGCCGTCATCTCCTCTC 60.527 60.000 0.00 0.00 0.00 3.20
2153 2669 0.179097 GTTGCCGTCATCTCCTCTCC 60.179 60.000 0.00 0.00 0.00 3.71
2154 2670 1.330655 TTGCCGTCATCTCCTCTCCC 61.331 60.000 0.00 0.00 0.00 4.30
2155 2671 1.456705 GCCGTCATCTCCTCTCCCT 60.457 63.158 0.00 0.00 0.00 4.20
2156 2672 1.460273 GCCGTCATCTCCTCTCCCTC 61.460 65.000 0.00 0.00 0.00 4.30
2157 2673 1.169661 CCGTCATCTCCTCTCCCTCG 61.170 65.000 0.00 0.00 0.00 4.63
2158 2674 1.791103 CGTCATCTCCTCTCCCTCGC 61.791 65.000 0.00 0.00 0.00 5.03
2159 2675 1.152652 TCATCTCCTCTCCCTCGCC 60.153 63.158 0.00 0.00 0.00 5.54
2160 2676 2.203422 ATCTCCTCTCCCTCGCCG 60.203 66.667 0.00 0.00 0.00 6.46
2161 2677 3.801068 ATCTCCTCTCCCTCGCCGG 62.801 68.421 0.00 0.00 0.00 6.13
2162 2678 4.507916 CTCCTCTCCCTCGCCGGA 62.508 72.222 5.05 0.00 33.16 5.14
2175 2691 2.361610 CCGGAGCCAGGCACAATT 60.362 61.111 15.80 0.00 0.00 2.32
2176 2692 1.077787 CCGGAGCCAGGCACAATTA 60.078 57.895 15.80 0.00 0.00 1.40
2177 2693 1.097547 CCGGAGCCAGGCACAATTAG 61.098 60.000 15.80 0.00 0.00 1.73
2178 2694 0.392998 CGGAGCCAGGCACAATTAGT 60.393 55.000 15.80 0.00 0.00 2.24
2179 2695 1.839424 GGAGCCAGGCACAATTAGTT 58.161 50.000 15.80 0.00 0.00 2.24
2180 2696 2.679639 CGGAGCCAGGCACAATTAGTTA 60.680 50.000 15.80 0.00 0.00 2.24
2181 2697 3.555966 GGAGCCAGGCACAATTAGTTAT 58.444 45.455 15.80 0.00 0.00 1.89
2182 2698 4.714632 GGAGCCAGGCACAATTAGTTATA 58.285 43.478 15.80 0.00 0.00 0.98
2183 2699 4.757149 GGAGCCAGGCACAATTAGTTATAG 59.243 45.833 15.80 0.00 0.00 1.31
2184 2700 5.368989 GAGCCAGGCACAATTAGTTATAGT 58.631 41.667 15.80 0.00 0.00 2.12
2185 2701 6.463897 GGAGCCAGGCACAATTAGTTATAGTA 60.464 42.308 15.80 0.00 0.00 1.82
2186 2702 6.525629 AGCCAGGCACAATTAGTTATAGTAG 58.474 40.000 15.80 0.00 0.00 2.57
2187 2703 6.326583 AGCCAGGCACAATTAGTTATAGTAGA 59.673 38.462 15.80 0.00 0.00 2.59
2188 2704 6.424207 GCCAGGCACAATTAGTTATAGTAGAC 59.576 42.308 6.55 0.00 0.00 2.59
2189 2705 7.497595 CCAGGCACAATTAGTTATAGTAGACA 58.502 38.462 0.00 0.00 0.00 3.41
2190 2706 7.653713 CCAGGCACAATTAGTTATAGTAGACAG 59.346 40.741 0.00 0.00 0.00 3.51
2191 2707 8.198109 CAGGCACAATTAGTTATAGTAGACAGT 58.802 37.037 0.00 0.00 0.00 3.55
2192 2708 8.414778 AGGCACAATTAGTTATAGTAGACAGTC 58.585 37.037 0.00 0.00 0.00 3.51
2193 2709 7.378995 GGCACAATTAGTTATAGTAGACAGTCG 59.621 40.741 0.00 0.00 0.00 4.18
2194 2710 7.378995 GCACAATTAGTTATAGTAGACAGTCGG 59.621 40.741 0.00 0.00 0.00 4.79
2195 2711 8.618677 CACAATTAGTTATAGTAGACAGTCGGA 58.381 37.037 0.00 0.00 0.00 4.55
2196 2712 9.182214 ACAATTAGTTATAGTAGACAGTCGGAA 57.818 33.333 0.00 0.00 0.00 4.30
2199 2715 8.798859 TTAGTTATAGTAGACAGTCGGAAAGT 57.201 34.615 0.00 0.00 0.00 2.66
2200 2716 7.319142 AGTTATAGTAGACAGTCGGAAAGTC 57.681 40.000 0.00 3.60 0.00 3.01
2201 2717 4.879104 ATAGTAGACAGTCGGAAAGTCG 57.121 45.455 0.00 0.00 37.36 4.18
2202 2718 2.502295 AGTAGACAGTCGGAAAGTCGT 58.498 47.619 0.00 0.00 37.36 4.34
2203 2719 2.225963 AGTAGACAGTCGGAAAGTCGTG 59.774 50.000 0.00 0.00 37.36 4.35
2204 2720 0.318784 AGACAGTCGGAAAGTCGTGC 60.319 55.000 0.00 0.00 37.36 5.34
2205 2721 0.318784 GACAGTCGGAAAGTCGTGCT 60.319 55.000 0.00 0.00 0.00 4.40
2206 2722 0.956633 ACAGTCGGAAAGTCGTGCTA 59.043 50.000 0.00 0.00 0.00 3.49
2207 2723 1.338973 ACAGTCGGAAAGTCGTGCTAA 59.661 47.619 0.00 0.00 0.00 3.09
2208 2724 1.986378 CAGTCGGAAAGTCGTGCTAAG 59.014 52.381 0.00 0.00 0.00 2.18
2209 2725 1.067776 AGTCGGAAAGTCGTGCTAAGG 60.068 52.381 0.00 0.00 0.00 2.69
2210 2726 0.389426 TCGGAAAGTCGTGCTAAGGC 60.389 55.000 0.00 0.00 39.26 4.35
2211 2727 1.359459 CGGAAAGTCGTGCTAAGGCC 61.359 60.000 0.00 0.00 37.74 5.19
2212 2728 0.036294 GGAAAGTCGTGCTAAGGCCT 60.036 55.000 0.00 0.00 37.74 5.19
2213 2729 1.610886 GGAAAGTCGTGCTAAGGCCTT 60.611 52.381 24.18 24.18 37.74 4.35
2214 2730 2.354403 GGAAAGTCGTGCTAAGGCCTTA 60.354 50.000 23.79 23.79 37.74 2.69
2215 2731 3.532542 GAAAGTCGTGCTAAGGCCTTAT 58.467 45.455 25.37 7.43 37.74 1.73
2216 2732 4.442472 GGAAAGTCGTGCTAAGGCCTTATA 60.442 45.833 25.37 14.69 37.74 0.98
2217 2733 4.323553 AAGTCGTGCTAAGGCCTTATAG 57.676 45.455 25.37 17.62 37.74 1.31
2218 2734 2.628657 AGTCGTGCTAAGGCCTTATAGG 59.371 50.000 25.37 20.41 38.80 2.57
2219 2735 2.626743 GTCGTGCTAAGGCCTTATAGGA 59.373 50.000 25.37 22.06 37.67 2.94
2220 2736 2.626743 TCGTGCTAAGGCCTTATAGGAC 59.373 50.000 25.37 24.18 46.64 3.85
2228 2744 2.640184 GGCCTTATAGGACCAACACAC 58.360 52.381 0.00 0.00 37.46 3.82
2229 2745 2.640184 GCCTTATAGGACCAACACACC 58.360 52.381 0.00 0.00 37.67 4.16
2230 2746 2.026636 GCCTTATAGGACCAACACACCA 60.027 50.000 0.00 0.00 37.67 4.17
2231 2747 3.873910 CCTTATAGGACCAACACACCAG 58.126 50.000 0.00 0.00 37.67 4.00
2232 2748 3.517901 CCTTATAGGACCAACACACCAGA 59.482 47.826 0.00 0.00 37.67 3.86
2233 2749 4.019681 CCTTATAGGACCAACACACCAGAA 60.020 45.833 0.00 0.00 37.67 3.02
2234 2750 2.922740 TAGGACCAACACACCAGAAC 57.077 50.000 0.00 0.00 0.00 3.01
2235 2751 0.916086 AGGACCAACACACCAGAACA 59.084 50.000 0.00 0.00 0.00 3.18
2236 2752 1.494721 AGGACCAACACACCAGAACAT 59.505 47.619 0.00 0.00 0.00 2.71
2237 2753 1.880027 GGACCAACACACCAGAACATC 59.120 52.381 0.00 0.00 0.00 3.06
2238 2754 2.571212 GACCAACACACCAGAACATCA 58.429 47.619 0.00 0.00 0.00 3.07
2239 2755 2.948979 GACCAACACACCAGAACATCAA 59.051 45.455 0.00 0.00 0.00 2.57
2240 2756 2.687935 ACCAACACACCAGAACATCAAC 59.312 45.455 0.00 0.00 0.00 3.18
2241 2757 2.951642 CCAACACACCAGAACATCAACT 59.048 45.455 0.00 0.00 0.00 3.16
2242 2758 3.243168 CCAACACACCAGAACATCAACTG 60.243 47.826 0.00 0.00 0.00 3.16
2243 2759 1.949525 ACACACCAGAACATCAACTGC 59.050 47.619 0.00 0.00 33.40 4.40
2244 2760 1.267806 CACACCAGAACATCAACTGCC 59.732 52.381 0.00 0.00 33.40 4.85
2245 2761 0.518636 CACCAGAACATCAACTGCCG 59.481 55.000 0.00 0.00 33.40 5.69
2246 2762 1.237285 ACCAGAACATCAACTGCCGC 61.237 55.000 0.00 0.00 33.40 6.53
2247 2763 1.503542 CAGAACATCAACTGCCGCC 59.496 57.895 0.00 0.00 0.00 6.13
2248 2764 2.034879 AGAACATCAACTGCCGCCG 61.035 57.895 0.00 0.00 0.00 6.46
2249 2765 2.031919 AACATCAACTGCCGCCGA 59.968 55.556 0.00 0.00 0.00 5.54
2250 2766 1.369091 GAACATCAACTGCCGCCGAT 61.369 55.000 0.00 0.00 0.00 4.18
2251 2767 1.647545 AACATCAACTGCCGCCGATG 61.648 55.000 6.01 6.01 40.84 3.84
2252 2768 1.815003 CATCAACTGCCGCCGATGA 60.815 57.895 0.00 0.00 37.97 2.92
2253 2769 1.078497 ATCAACTGCCGCCGATGAA 60.078 52.632 0.00 0.00 0.00 2.57
2254 2770 1.091771 ATCAACTGCCGCCGATGAAG 61.092 55.000 0.00 0.00 0.00 3.02
2255 2771 3.127533 AACTGCCGCCGATGAAGC 61.128 61.111 0.00 0.00 0.00 3.86
2265 2781 3.944422 GCCGATGAAGCGAAATTTAGA 57.056 42.857 2.11 0.00 0.00 2.10
2266 2782 4.474226 GCCGATGAAGCGAAATTTAGAT 57.526 40.909 2.11 0.00 0.00 1.98
2267 2783 4.458708 GCCGATGAAGCGAAATTTAGATC 58.541 43.478 2.11 0.78 0.00 2.75
2268 2784 4.692135 CCGATGAAGCGAAATTTAGATCG 58.308 43.478 2.11 7.59 41.81 3.69
2269 2785 4.376413 CCGATGAAGCGAAATTTAGATCGG 60.376 45.833 18.07 18.07 43.53 4.18
2270 2786 4.444388 CGATGAAGCGAAATTTAGATCGGA 59.556 41.667 2.11 0.00 39.38 4.55
2271 2787 5.051039 CGATGAAGCGAAATTTAGATCGGAA 60.051 40.000 2.11 0.00 39.38 4.30
2272 2788 5.718649 TGAAGCGAAATTTAGATCGGAAG 57.281 39.130 2.11 0.00 39.38 3.46
2273 2789 4.570772 TGAAGCGAAATTTAGATCGGAAGG 59.429 41.667 2.11 0.00 39.38 3.46
2274 2790 4.402056 AGCGAAATTTAGATCGGAAGGA 57.598 40.909 2.11 0.00 39.38 3.36
2275 2791 4.120589 AGCGAAATTTAGATCGGAAGGAC 58.879 43.478 2.11 0.00 39.38 3.85
2276 2792 3.247886 GCGAAATTTAGATCGGAAGGACC 59.752 47.826 2.11 0.00 39.38 4.46
2277 2793 3.808174 CGAAATTTAGATCGGAAGGACCC 59.192 47.826 0.00 0.00 35.49 4.46
2285 2801 3.801620 GGAAGGACCCGACCTGAA 58.198 61.111 0.00 0.00 40.49 3.02
2286 2802 1.597461 GGAAGGACCCGACCTGAAG 59.403 63.158 0.00 0.00 40.49 3.02
2287 2803 0.903454 GGAAGGACCCGACCTGAAGA 60.903 60.000 0.00 0.00 40.49 2.87
2288 2804 0.246910 GAAGGACCCGACCTGAAGAC 59.753 60.000 0.00 0.00 40.49 3.01
2289 2805 0.471211 AAGGACCCGACCTGAAGACA 60.471 55.000 0.00 0.00 40.49 3.41
2290 2806 1.186267 AGGACCCGACCTGAAGACAC 61.186 60.000 0.00 0.00 39.01 3.67
2291 2807 1.469335 GGACCCGACCTGAAGACACA 61.469 60.000 0.00 0.00 0.00 3.72
2292 2808 0.608640 GACCCGACCTGAAGACACAT 59.391 55.000 0.00 0.00 0.00 3.21
2293 2809 0.321671 ACCCGACCTGAAGACACATG 59.678 55.000 0.00 0.00 0.00 3.21
2294 2810 0.608130 CCCGACCTGAAGACACATGA 59.392 55.000 0.00 0.00 0.00 3.07
2295 2811 1.001974 CCCGACCTGAAGACACATGAA 59.998 52.381 0.00 0.00 0.00 2.57
2296 2812 2.069273 CCGACCTGAAGACACATGAAC 58.931 52.381 0.00 0.00 0.00 3.18
2297 2813 2.547855 CCGACCTGAAGACACATGAACA 60.548 50.000 0.00 0.00 0.00 3.18
2298 2814 2.733552 CGACCTGAAGACACATGAACAG 59.266 50.000 0.00 0.00 0.00 3.16
2299 2815 3.552890 CGACCTGAAGACACATGAACAGA 60.553 47.826 0.00 0.00 0.00 3.41
2300 2816 3.993081 GACCTGAAGACACATGAACAGAG 59.007 47.826 0.00 0.00 0.00 3.35
2301 2817 3.643320 ACCTGAAGACACATGAACAGAGA 59.357 43.478 0.00 0.00 0.00 3.10
2302 2818 3.993081 CCTGAAGACACATGAACAGAGAC 59.007 47.826 0.00 0.00 0.00 3.36
2303 2819 3.642705 TGAAGACACATGAACAGAGACG 58.357 45.455 0.00 0.00 0.00 4.18
2304 2820 3.317993 TGAAGACACATGAACAGAGACGA 59.682 43.478 0.00 0.00 0.00 4.20
2305 2821 4.202111 TGAAGACACATGAACAGAGACGAA 60.202 41.667 0.00 0.00 0.00 3.85
2306 2822 4.527509 AGACACATGAACAGAGACGAAT 57.472 40.909 0.00 0.00 0.00 3.34
2307 2823 5.644977 AGACACATGAACAGAGACGAATA 57.355 39.130 0.00 0.00 0.00 1.75
2308 2824 6.025749 AGACACATGAACAGAGACGAATAA 57.974 37.500 0.00 0.00 0.00 1.40
2309 2825 6.455647 AGACACATGAACAGAGACGAATAAA 58.544 36.000 0.00 0.00 0.00 1.40
2310 2826 6.587990 AGACACATGAACAGAGACGAATAAAG 59.412 38.462 0.00 0.00 0.00 1.85
2311 2827 6.455647 ACACATGAACAGAGACGAATAAAGA 58.544 36.000 0.00 0.00 0.00 2.52
2312 2828 6.366332 ACACATGAACAGAGACGAATAAAGAC 59.634 38.462 0.00 0.00 0.00 3.01
2313 2829 5.869888 ACATGAACAGAGACGAATAAAGACC 59.130 40.000 0.00 0.00 0.00 3.85
2314 2830 4.482386 TGAACAGAGACGAATAAAGACCG 58.518 43.478 0.00 0.00 0.00 4.79
2315 2831 3.505464 ACAGAGACGAATAAAGACCGG 57.495 47.619 0.00 0.00 0.00 5.28
2316 2832 3.087031 ACAGAGACGAATAAAGACCGGA 58.913 45.455 9.46 0.00 0.00 5.14
2317 2833 3.700038 ACAGAGACGAATAAAGACCGGAT 59.300 43.478 9.46 0.00 0.00 4.18
2318 2834 4.202030 ACAGAGACGAATAAAGACCGGATC 60.202 45.833 9.46 1.42 0.00 3.36
2319 2835 3.318557 AGAGACGAATAAAGACCGGATCC 59.681 47.826 9.46 0.00 0.00 3.36
2320 2836 2.034305 AGACGAATAAAGACCGGATCCG 59.966 50.000 27.65 27.65 39.44 4.18
2321 2837 2.026641 ACGAATAAAGACCGGATCCGA 58.973 47.619 35.42 14.86 42.83 4.55
2322 2838 2.034305 ACGAATAAAGACCGGATCCGAG 59.966 50.000 35.42 25.48 42.83 4.63
2323 2839 2.405172 GAATAAAGACCGGATCCGAGC 58.595 52.381 35.42 24.41 42.83 5.03
2324 2840 1.410004 ATAAAGACCGGATCCGAGCA 58.590 50.000 35.42 13.73 42.83 4.26
2325 2841 0.744874 TAAAGACCGGATCCGAGCAG 59.255 55.000 35.42 20.34 42.83 4.24
2326 2842 0.970937 AAAGACCGGATCCGAGCAGA 60.971 55.000 35.42 0.00 42.83 4.26
2327 2843 0.757188 AAGACCGGATCCGAGCAGAT 60.757 55.000 35.42 13.00 42.83 2.90
2328 2844 1.175983 AGACCGGATCCGAGCAGATC 61.176 60.000 35.42 19.86 42.83 2.75
2333 2849 2.127839 GATCCGAGCAGATCCACCA 58.872 57.895 0.00 0.00 37.31 4.17
2334 2850 0.465705 GATCCGAGCAGATCCACCAA 59.534 55.000 0.00 0.00 37.31 3.67
2335 2851 0.911769 ATCCGAGCAGATCCACCAAA 59.088 50.000 0.00 0.00 0.00 3.28
2336 2852 0.250234 TCCGAGCAGATCCACCAAAG 59.750 55.000 0.00 0.00 0.00 2.77
2337 2853 0.250234 CCGAGCAGATCCACCAAAGA 59.750 55.000 0.00 0.00 0.00 2.52
2338 2854 1.363744 CGAGCAGATCCACCAAAGAC 58.636 55.000 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 6.721208 GGATCCAGGCATCTTTCCAAATATTA 59.279 38.462 6.95 0.00 0.00 0.98
29 30 2.925966 TTTGGGATCCAGGCATCTTT 57.074 45.000 15.23 0.00 33.81 2.52
109 110 1.285280 TGGAGACCGGGTCAATCAAT 58.715 50.000 27.87 7.01 34.60 2.57
146 147 6.957631 TGGTCCACATAGTTTGTCTAATCAT 58.042 36.000 0.00 0.00 36.00 2.45
230 231 5.812286 ACCATTTTTCGTATAACTCCAGGT 58.188 37.500 0.00 0.00 0.00 4.00
311 312 5.595133 GTCCCATCCCGTTGGAATATTTTAA 59.405 40.000 0.00 0.00 45.98 1.52
407 408 0.526954 GTACCATGTAGTGTCCGCCG 60.527 60.000 0.00 0.00 0.00 6.46
483 484 2.050144 CTACACCCTGGGAGCATGTAT 58.950 52.381 22.23 0.00 0.00 2.29
765 768 3.522750 AGCTATGATCCCCATTGAGATCC 59.477 47.826 11.72 1.05 38.50 3.36
1151 1158 3.461061 TCACAAGCATAGTGATAGCAGC 58.539 45.455 2.30 0.00 40.80 5.25
1366 1375 5.899299 ACAATTTGGCTCATCTATTCTTGC 58.101 37.500 0.78 0.00 0.00 4.01
1367 1376 6.971184 GTGACAATTTGGCTCATCTATTCTTG 59.029 38.462 3.47 0.00 0.00 3.02
1368 1377 6.183360 CGTGACAATTTGGCTCATCTATTCTT 60.183 38.462 3.47 0.00 0.00 2.52
1369 1378 5.295292 CGTGACAATTTGGCTCATCTATTCT 59.705 40.000 3.47 0.00 0.00 2.40
1370 1379 5.505286 CGTGACAATTTGGCTCATCTATTC 58.495 41.667 3.47 0.00 0.00 1.75
1371 1380 4.201950 GCGTGACAATTTGGCTCATCTATT 60.202 41.667 3.47 0.00 0.00 1.73
1372 1381 3.313526 GCGTGACAATTTGGCTCATCTAT 59.686 43.478 3.47 0.00 0.00 1.98
1373 1382 2.677836 GCGTGACAATTTGGCTCATCTA 59.322 45.455 3.47 0.00 0.00 1.98
1374 1383 1.470098 GCGTGACAATTTGGCTCATCT 59.530 47.619 3.47 0.00 0.00 2.90
1375 1384 1.199789 TGCGTGACAATTTGGCTCATC 59.800 47.619 3.47 0.00 0.00 2.92
1376 1385 1.246649 TGCGTGACAATTTGGCTCAT 58.753 45.000 3.47 0.00 0.00 2.90
1377 1386 1.068402 CATGCGTGACAATTTGGCTCA 60.068 47.619 0.00 0.00 0.00 4.26
1378 1387 1.621107 CATGCGTGACAATTTGGCTC 58.379 50.000 0.00 0.00 0.00 4.70
1379 1388 0.388907 GCATGCGTGACAATTTGGCT 60.389 50.000 10.93 0.00 0.00 4.75
1380 1389 1.353609 GGCATGCGTGACAATTTGGC 61.354 55.000 12.44 0.00 31.88 4.52
1381 1390 0.038435 TGGCATGCGTGACAATTTGG 60.038 50.000 13.40 0.00 41.45 3.28
1382 1391 3.493351 TGGCATGCGTGACAATTTG 57.507 47.368 13.40 0.00 41.45 2.32
1387 1396 1.898094 AGCTTTGGCATGCGTGACA 60.898 52.632 11.40 11.40 43.12 3.58
1388 1397 1.443194 CAGCTTTGGCATGCGTGAC 60.443 57.895 12.44 7.69 41.70 3.67
1389 1398 0.961857 ATCAGCTTTGGCATGCGTGA 60.962 50.000 12.44 7.67 41.70 4.35
1390 1399 0.800683 CATCAGCTTTGGCATGCGTG 60.801 55.000 12.44 0.09 41.70 5.34
1391 1400 1.509463 CATCAGCTTTGGCATGCGT 59.491 52.632 12.44 0.00 41.70 5.24
1392 1401 1.226859 CCATCAGCTTTGGCATGCG 60.227 57.895 12.44 0.00 41.70 4.73
1393 1402 0.102481 CTCCATCAGCTTTGGCATGC 59.898 55.000 9.90 9.90 41.70 4.06
1394 1403 1.404391 GACTCCATCAGCTTTGGCATG 59.596 52.381 7.48 0.00 41.70 4.06
1395 1404 1.005097 TGACTCCATCAGCTTTGGCAT 59.995 47.619 7.48 0.00 41.70 4.40
1396 1405 0.401356 TGACTCCATCAGCTTTGGCA 59.599 50.000 7.48 0.00 41.70 4.92
1397 1406 1.538047 TTGACTCCATCAGCTTTGGC 58.462 50.000 7.48 0.00 38.99 4.52
1398 1407 3.618351 AGATTGACTCCATCAGCTTTGG 58.382 45.455 6.16 6.16 38.99 3.28
1399 1408 5.668471 TCTAGATTGACTCCATCAGCTTTG 58.332 41.667 0.00 0.00 38.99 2.77
1400 1409 5.946942 TCTAGATTGACTCCATCAGCTTT 57.053 39.130 0.00 0.00 38.99 3.51
1401 1410 5.424895 AGTTCTAGATTGACTCCATCAGCTT 59.575 40.000 0.00 0.00 38.99 3.74
1402 1411 4.961730 AGTTCTAGATTGACTCCATCAGCT 59.038 41.667 0.00 0.00 38.99 4.24
1403 1412 5.275067 AGTTCTAGATTGACTCCATCAGC 57.725 43.478 0.00 0.00 38.99 4.26
1404 1413 7.815840 TCTAGTTCTAGATTGACTCCATCAG 57.184 40.000 5.56 0.00 38.99 2.90
1405 1414 8.774546 ATTCTAGTTCTAGATTGACTCCATCA 57.225 34.615 9.88 0.00 34.65 3.07
1406 1415 8.855110 TGATTCTAGTTCTAGATTGACTCCATC 58.145 37.037 9.88 8.08 0.00 3.51
1407 1416 8.774546 TGATTCTAGTTCTAGATTGACTCCAT 57.225 34.615 9.88 0.00 0.00 3.41
1408 1417 8.595362 TTGATTCTAGTTCTAGATTGACTCCA 57.405 34.615 9.88 0.31 0.00 3.86
1409 1418 9.528018 CTTTGATTCTAGTTCTAGATTGACTCC 57.472 37.037 9.88 0.00 0.00 3.85
1412 1421 9.862371 TGTCTTTGATTCTAGTTCTAGATTGAC 57.138 33.333 9.88 9.95 0.00 3.18
1414 1423 9.311916 CCTGTCTTTGATTCTAGTTCTAGATTG 57.688 37.037 9.88 0.00 0.00 2.67
1415 1424 7.984617 GCCTGTCTTTGATTCTAGTTCTAGATT 59.015 37.037 9.88 7.07 0.00 2.40
1416 1425 7.418483 GGCCTGTCTTTGATTCTAGTTCTAGAT 60.418 40.741 9.88 2.17 0.00 1.98
1417 1426 6.127310 GGCCTGTCTTTGATTCTAGTTCTAGA 60.127 42.308 0.00 5.56 0.00 2.43
1418 1427 6.045955 GGCCTGTCTTTGATTCTAGTTCTAG 58.954 44.000 0.00 0.83 0.00 2.43
1419 1428 5.483937 TGGCCTGTCTTTGATTCTAGTTCTA 59.516 40.000 3.32 0.00 0.00 2.10
1420 1429 4.287067 TGGCCTGTCTTTGATTCTAGTTCT 59.713 41.667 3.32 0.00 0.00 3.01
1421 1430 4.579869 TGGCCTGTCTTTGATTCTAGTTC 58.420 43.478 3.32 0.00 0.00 3.01
1422 1431 4.042187 ACTGGCCTGTCTTTGATTCTAGTT 59.958 41.667 9.88 0.00 0.00 2.24
1423 1432 3.584848 ACTGGCCTGTCTTTGATTCTAGT 59.415 43.478 9.88 0.00 0.00 2.57
1424 1433 3.937706 CACTGGCCTGTCTTTGATTCTAG 59.062 47.826 13.09 0.00 0.00 2.43
1425 1434 3.327757 ACACTGGCCTGTCTTTGATTCTA 59.672 43.478 13.09 0.00 0.00 2.10
1426 1435 2.107204 ACACTGGCCTGTCTTTGATTCT 59.893 45.455 13.09 0.00 0.00 2.40
1427 1436 2.508526 ACACTGGCCTGTCTTTGATTC 58.491 47.619 13.09 0.00 0.00 2.52
1428 1437 2.664402 ACACTGGCCTGTCTTTGATT 57.336 45.000 13.09 0.00 0.00 2.57
1429 1438 2.664402 AACACTGGCCTGTCTTTGAT 57.336 45.000 13.09 0.00 0.00 2.57
1430 1439 2.435372 AAACACTGGCCTGTCTTTGA 57.565 45.000 13.09 0.00 0.00 2.69
1431 1440 3.632145 AGTAAAACACTGGCCTGTCTTTG 59.368 43.478 20.98 11.34 35.62 2.77
1432 1441 3.898482 AGTAAAACACTGGCCTGTCTTT 58.102 40.909 13.09 16.27 35.62 2.52
1433 1442 3.577805 AGTAAAACACTGGCCTGTCTT 57.422 42.857 13.09 4.73 35.62 3.01
1434 1443 3.214328 CAAGTAAAACACTGGCCTGTCT 58.786 45.455 13.09 2.89 37.63 3.41
1435 1444 3.626028 CAAGTAAAACACTGGCCTGTC 57.374 47.619 13.09 0.33 37.63 3.51
1441 1450 1.613437 CCCCTGCAAGTAAAACACTGG 59.387 52.381 0.00 0.00 37.63 4.00
1442 1451 2.293399 GTCCCCTGCAAGTAAAACACTG 59.707 50.000 0.00 0.00 37.63 3.66
1443 1452 2.583143 GTCCCCTGCAAGTAAAACACT 58.417 47.619 0.00 0.00 40.05 3.55
1444 1453 1.265905 CGTCCCCTGCAAGTAAAACAC 59.734 52.381 0.00 0.00 0.00 3.32
1445 1454 1.600023 CGTCCCCTGCAAGTAAAACA 58.400 50.000 0.00 0.00 0.00 2.83
1446 1455 0.879090 CCGTCCCCTGCAAGTAAAAC 59.121 55.000 0.00 0.00 0.00 2.43
1447 1456 0.891904 GCCGTCCCCTGCAAGTAAAA 60.892 55.000 0.00 0.00 0.00 1.52
1448 1457 1.302993 GCCGTCCCCTGCAAGTAAA 60.303 57.895 0.00 0.00 0.00 2.01
1449 1458 2.349755 GCCGTCCCCTGCAAGTAA 59.650 61.111 0.00 0.00 0.00 2.24
1450 1459 3.712907 GGCCGTCCCCTGCAAGTA 61.713 66.667 0.00 0.00 0.00 2.24
1456 1465 2.246761 TTATTGTCGGCCGTCCCCTG 62.247 60.000 27.15 0.00 0.00 4.45
1457 1466 1.555477 TTTATTGTCGGCCGTCCCCT 61.555 55.000 27.15 9.99 0.00 4.79
1458 1467 0.677414 TTTTATTGTCGGCCGTCCCC 60.677 55.000 27.15 12.22 0.00 4.81
1459 1468 1.332686 GATTTTATTGTCGGCCGTCCC 59.667 52.381 27.15 14.85 0.00 4.46
1460 1469 2.011222 TGATTTTATTGTCGGCCGTCC 58.989 47.619 27.15 17.53 0.00 4.79
1461 1470 3.372822 TCTTGATTTTATTGTCGGCCGTC 59.627 43.478 27.15 21.30 0.00 4.79
1462 1471 3.340034 TCTTGATTTTATTGTCGGCCGT 58.660 40.909 27.15 8.36 0.00 5.68
1463 1472 4.342772 CTTCTTGATTTTATTGTCGGCCG 58.657 43.478 22.12 22.12 0.00 6.13
1464 1473 4.105486 GCTTCTTGATTTTATTGTCGGCC 58.895 43.478 0.00 0.00 0.00 6.13
1465 1474 4.986622 AGCTTCTTGATTTTATTGTCGGC 58.013 39.130 0.00 0.00 0.00 5.54
1466 1475 7.062255 GGAAAAGCTTCTTGATTTTATTGTCGG 59.938 37.037 0.00 0.00 43.30 4.79
1467 1476 7.594758 TGGAAAAGCTTCTTGATTTTATTGTCG 59.405 33.333 0.00 0.00 43.30 4.35
1468 1477 8.703336 GTGGAAAAGCTTCTTGATTTTATTGTC 58.297 33.333 0.00 0.00 43.30 3.18
1469 1478 7.382218 CGTGGAAAAGCTTCTTGATTTTATTGT 59.618 33.333 0.00 0.00 43.30 2.71
1470 1479 7.619982 GCGTGGAAAAGCTTCTTGATTTTATTG 60.620 37.037 0.00 0.00 43.30 1.90
1471 1480 6.366061 GCGTGGAAAAGCTTCTTGATTTTATT 59.634 34.615 0.00 0.00 43.30 1.40
1472 1481 5.863935 GCGTGGAAAAGCTTCTTGATTTTAT 59.136 36.000 0.00 0.00 43.30 1.40
1473 1482 5.219633 GCGTGGAAAAGCTTCTTGATTTTA 58.780 37.500 0.00 0.00 43.30 1.52
1474 1483 4.051237 GCGTGGAAAAGCTTCTTGATTTT 58.949 39.130 0.00 0.00 45.53 1.82
1475 1484 3.068024 TGCGTGGAAAAGCTTCTTGATTT 59.932 39.130 0.00 0.00 35.59 2.17
1476 1485 2.622942 TGCGTGGAAAAGCTTCTTGATT 59.377 40.909 0.00 0.00 0.00 2.57
1477 1486 2.229792 TGCGTGGAAAAGCTTCTTGAT 58.770 42.857 0.00 0.00 0.00 2.57
1478 1487 1.674359 TGCGTGGAAAAGCTTCTTGA 58.326 45.000 0.00 0.00 0.00 3.02
1479 1488 2.490328 TTGCGTGGAAAAGCTTCTTG 57.510 45.000 0.00 0.00 0.00 3.02
1480 1489 3.518634 TTTTGCGTGGAAAAGCTTCTT 57.481 38.095 0.00 0.00 0.00 2.52
1481 1490 3.518634 TTTTTGCGTGGAAAAGCTTCT 57.481 38.095 0.00 0.00 0.00 2.85
1500 1509 5.163561 TGACCGTTGAAGCTTCTTGATTTTT 60.164 36.000 26.09 4.31 0.00 1.94
1501 1510 4.338118 TGACCGTTGAAGCTTCTTGATTTT 59.662 37.500 26.09 5.74 0.00 1.82
1502 1511 3.882888 TGACCGTTGAAGCTTCTTGATTT 59.117 39.130 26.09 7.31 0.00 2.17
1503 1512 3.476552 TGACCGTTGAAGCTTCTTGATT 58.523 40.909 26.09 8.86 0.00 2.57
1504 1513 3.126001 TGACCGTTGAAGCTTCTTGAT 57.874 42.857 26.09 8.99 0.00 2.57
1505 1514 2.613026 TGACCGTTGAAGCTTCTTGA 57.387 45.000 26.09 10.38 0.00 3.02
1506 1515 2.160417 GGATGACCGTTGAAGCTTCTTG 59.840 50.000 26.09 15.34 0.00 3.02
1507 1516 2.039084 AGGATGACCGTTGAAGCTTCTT 59.961 45.455 26.09 6.43 41.83 2.52
1508 1517 1.625818 AGGATGACCGTTGAAGCTTCT 59.374 47.619 26.09 6.43 41.83 2.85
1509 1518 1.734465 CAGGATGACCGTTGAAGCTTC 59.266 52.381 19.89 19.89 39.69 3.86
1510 1519 1.611673 CCAGGATGACCGTTGAAGCTT 60.612 52.381 0.00 0.00 39.69 3.74
1511 1520 0.036010 CCAGGATGACCGTTGAAGCT 60.036 55.000 0.00 0.00 39.69 3.74
1512 1521 1.026718 CCCAGGATGACCGTTGAAGC 61.027 60.000 0.00 0.00 39.69 3.86
1513 1522 0.613260 TCCCAGGATGACCGTTGAAG 59.387 55.000 0.00 0.00 39.69 3.02
1514 1523 1.209504 GATCCCAGGATGACCGTTGAA 59.790 52.381 3.29 0.00 39.69 2.69
1515 1524 0.830648 GATCCCAGGATGACCGTTGA 59.169 55.000 3.29 0.00 39.69 3.18
1516 1525 0.541392 TGATCCCAGGATGACCGTTG 59.459 55.000 3.29 0.00 39.69 4.10
1517 1526 1.511613 ATGATCCCAGGATGACCGTT 58.488 50.000 3.29 0.00 39.69 4.44
1518 1527 1.511613 AATGATCCCAGGATGACCGT 58.488 50.000 3.29 0.00 39.69 4.83
1519 1528 2.645838 AAATGATCCCAGGATGACCG 57.354 50.000 3.29 0.00 39.69 4.79
1520 1529 4.026052 ACAAAAATGATCCCAGGATGACC 58.974 43.478 3.29 0.00 39.69 4.02
1521 1530 6.966534 ATACAAAAATGATCCCAGGATGAC 57.033 37.500 3.29 0.00 39.69 3.06
1522 1531 7.976414 AAATACAAAAATGATCCCAGGATGA 57.024 32.000 3.29 0.00 39.69 2.92
1523 1532 8.042515 ACAAAATACAAAAATGATCCCAGGATG 58.957 33.333 3.29 0.00 34.60 3.51
1524 1533 8.149631 ACAAAATACAAAAATGATCCCAGGAT 57.850 30.769 0.00 0.00 37.59 3.24
1525 1534 7.552050 ACAAAATACAAAAATGATCCCAGGA 57.448 32.000 0.00 0.00 0.00 3.86
1526 1535 9.150348 GTTACAAAATACAAAAATGATCCCAGG 57.850 33.333 0.00 0.00 0.00 4.45
1527 1536 9.150348 GGTTACAAAATACAAAAATGATCCCAG 57.850 33.333 0.00 0.00 0.00 4.45
1528 1537 8.875168 AGGTTACAAAATACAAAAATGATCCCA 58.125 29.630 0.00 0.00 0.00 4.37
1529 1538 9.719355 AAGGTTACAAAATACAAAAATGATCCC 57.281 29.630 0.00 0.00 0.00 3.85
1557 1566 9.280174 ACTAGGAAATCAACGAAAACTCATAAA 57.720 29.630 0.00 0.00 0.00 1.40
1558 1567 8.842358 ACTAGGAAATCAACGAAAACTCATAA 57.158 30.769 0.00 0.00 0.00 1.90
1559 1568 9.362539 GTACTAGGAAATCAACGAAAACTCATA 57.637 33.333 0.00 0.00 0.00 2.15
1560 1569 8.095169 AGTACTAGGAAATCAACGAAAACTCAT 58.905 33.333 0.00 0.00 0.00 2.90
1561 1570 7.439381 AGTACTAGGAAATCAACGAAAACTCA 58.561 34.615 0.00 0.00 0.00 3.41
1562 1571 7.886405 AGTACTAGGAAATCAACGAAAACTC 57.114 36.000 0.00 0.00 0.00 3.01
1563 1572 8.672823 AAAGTACTAGGAAATCAACGAAAACT 57.327 30.769 0.00 0.00 0.00 2.66
1564 1573 9.378597 GAAAAGTACTAGGAAATCAACGAAAAC 57.621 33.333 0.00 0.00 0.00 2.43
1565 1574 9.333724 AGAAAAGTACTAGGAAATCAACGAAAA 57.666 29.630 0.00 0.00 0.00 2.29
1566 1575 8.897872 AGAAAAGTACTAGGAAATCAACGAAA 57.102 30.769 0.00 0.00 0.00 3.46
1567 1576 8.897872 AAGAAAAGTACTAGGAAATCAACGAA 57.102 30.769 0.00 0.00 0.00 3.85
1568 1577 8.770828 CAAAGAAAAGTACTAGGAAATCAACGA 58.229 33.333 0.00 0.00 0.00 3.85
1569 1578 7.534239 GCAAAGAAAAGTACTAGGAAATCAACG 59.466 37.037 0.00 0.00 0.00 4.10
1570 1579 7.534239 CGCAAAGAAAAGTACTAGGAAATCAAC 59.466 37.037 0.00 0.00 0.00 3.18
1571 1580 7.308348 CCGCAAAGAAAAGTACTAGGAAATCAA 60.308 37.037 0.00 0.00 0.00 2.57
1572 1581 6.148811 CCGCAAAGAAAAGTACTAGGAAATCA 59.851 38.462 0.00 0.00 0.00 2.57
1573 1582 6.148976 ACCGCAAAGAAAAGTACTAGGAAATC 59.851 38.462 0.00 0.00 0.00 2.17
1574 1583 6.002082 ACCGCAAAGAAAAGTACTAGGAAAT 58.998 36.000 0.00 0.00 0.00 2.17
1575 1584 5.370679 ACCGCAAAGAAAAGTACTAGGAAA 58.629 37.500 0.00 0.00 0.00 3.13
1576 1585 4.964593 ACCGCAAAGAAAAGTACTAGGAA 58.035 39.130 0.00 0.00 0.00 3.36
1577 1586 4.039488 TGACCGCAAAGAAAAGTACTAGGA 59.961 41.667 0.00 0.00 0.00 2.94
1578 1587 4.312443 TGACCGCAAAGAAAAGTACTAGG 58.688 43.478 0.00 0.00 0.00 3.02
1579 1588 4.143094 GCTGACCGCAAAGAAAAGTACTAG 60.143 45.833 0.00 0.00 38.92 2.57
1580 1589 3.744426 GCTGACCGCAAAGAAAAGTACTA 59.256 43.478 0.00 0.00 38.92 1.82
1581 1590 2.548480 GCTGACCGCAAAGAAAAGTACT 59.452 45.455 0.00 0.00 38.92 2.73
1582 1591 2.917363 GCTGACCGCAAAGAAAAGTAC 58.083 47.619 0.00 0.00 38.92 2.73
1594 1603 0.445436 CATTTGAGTCTGCTGACCGC 59.555 55.000 18.96 12.50 43.91 5.68
1595 1604 2.084610 TCATTTGAGTCTGCTGACCG 57.915 50.000 18.96 3.05 43.91 4.79
1596 1605 4.456911 TCAATTCATTTGAGTCTGCTGACC 59.543 41.667 18.96 11.59 39.44 4.02
1597 1606 5.618056 TCAATTCATTTGAGTCTGCTGAC 57.382 39.130 15.36 15.36 39.44 3.51
1620 1629 9.697990 TGTCCTCCTTTTTAAAGTTTAGGTAAA 57.302 29.630 11.85 2.32 33.60 2.01
1621 1630 9.871175 ATGTCCTCCTTTTTAAAGTTTAGGTAA 57.129 29.630 11.85 0.00 33.60 2.85
1622 1631 9.292195 CATGTCCTCCTTTTTAAAGTTTAGGTA 57.708 33.333 11.85 6.57 33.60 3.08
1623 1632 7.255836 GCATGTCCTCCTTTTTAAAGTTTAGGT 60.256 37.037 0.00 0.00 33.60 3.08
1624 1633 7.039714 AGCATGTCCTCCTTTTTAAAGTTTAGG 60.040 37.037 0.00 5.64 34.20 2.69
1625 1634 7.809806 CAGCATGTCCTCCTTTTTAAAGTTTAG 59.190 37.037 0.00 0.00 34.20 1.85
1626 1635 7.255801 CCAGCATGTCCTCCTTTTTAAAGTTTA 60.256 37.037 0.00 0.00 34.20 2.01
1627 1636 6.462909 CCAGCATGTCCTCCTTTTTAAAGTTT 60.463 38.462 0.00 0.00 34.20 2.66
1628 1637 5.011023 CCAGCATGTCCTCCTTTTTAAAGTT 59.989 40.000 0.00 0.00 34.20 2.66
1629 1638 4.524328 CCAGCATGTCCTCCTTTTTAAAGT 59.476 41.667 0.00 0.00 34.20 2.66
1630 1639 4.619160 GCCAGCATGTCCTCCTTTTTAAAG 60.619 45.833 0.00 0.00 35.79 1.85
1631 1640 3.258123 GCCAGCATGTCCTCCTTTTTAAA 59.742 43.478 0.00 0.00 0.00 1.52
1632 1641 2.825532 GCCAGCATGTCCTCCTTTTTAA 59.174 45.455 0.00 0.00 0.00 1.52
1633 1642 2.041620 AGCCAGCATGTCCTCCTTTTTA 59.958 45.455 0.00 0.00 0.00 1.52
1634 1643 1.203100 AGCCAGCATGTCCTCCTTTTT 60.203 47.619 0.00 0.00 0.00 1.94
1635 1644 0.407139 AGCCAGCATGTCCTCCTTTT 59.593 50.000 0.00 0.00 0.00 2.27
1636 1645 0.323178 CAGCCAGCATGTCCTCCTTT 60.323 55.000 0.00 0.00 0.00 3.11
1637 1646 1.302285 CAGCCAGCATGTCCTCCTT 59.698 57.895 0.00 0.00 0.00 3.36
1638 1647 2.996395 CAGCCAGCATGTCCTCCT 59.004 61.111 0.00 0.00 0.00 3.69
1639 1648 2.827642 GCAGCCAGCATGTCCTCC 60.828 66.667 0.00 0.00 44.79 4.30
1648 1657 0.739112 GTGTAGACTCAGCAGCCAGC 60.739 60.000 0.00 0.00 46.19 4.85
1649 1658 0.457509 CGTGTAGACTCAGCAGCCAG 60.458 60.000 0.00 0.00 0.00 4.85
1650 1659 1.179174 ACGTGTAGACTCAGCAGCCA 61.179 55.000 0.00 0.00 0.00 4.75
1651 1660 0.038159 AACGTGTAGACTCAGCAGCC 60.038 55.000 0.00 0.00 0.00 4.85
1652 1661 2.520979 CTAACGTGTAGACTCAGCAGC 58.479 52.381 0.00 0.00 0.00 5.25
1653 1662 2.520979 GCTAACGTGTAGACTCAGCAG 58.479 52.381 8.39 0.00 0.00 4.24
1654 1663 1.201647 GGCTAACGTGTAGACTCAGCA 59.798 52.381 8.39 0.00 0.00 4.41
1655 1664 1.473278 AGGCTAACGTGTAGACTCAGC 59.527 52.381 7.16 0.00 0.00 4.26
1656 1665 4.023878 GGATAGGCTAACGTGTAGACTCAG 60.024 50.000 14.04 0.00 34.22 3.35
1657 1666 3.881688 GGATAGGCTAACGTGTAGACTCA 59.118 47.826 14.04 5.06 34.22 3.41
1658 1667 3.881688 TGGATAGGCTAACGTGTAGACTC 59.118 47.826 14.04 4.64 34.22 3.36
1659 1668 3.884091 CTGGATAGGCTAACGTGTAGACT 59.116 47.826 14.75 14.75 36.71 3.24
1660 1669 3.631227 ACTGGATAGGCTAACGTGTAGAC 59.369 47.826 0.00 5.92 0.00 2.59
1661 1670 3.894759 ACTGGATAGGCTAACGTGTAGA 58.105 45.455 0.00 0.00 0.00 2.59
1662 1671 4.650754 AACTGGATAGGCTAACGTGTAG 57.349 45.455 0.00 0.00 0.00 2.74
1663 1672 5.418524 TGTAAACTGGATAGGCTAACGTGTA 59.581 40.000 0.00 0.00 0.00 2.90
1664 1673 3.975168 AAACTGGATAGGCTAACGTGT 57.025 42.857 0.00 0.00 0.00 4.49
1665 1674 4.565564 GTGTAAACTGGATAGGCTAACGTG 59.434 45.833 0.00 0.00 0.00 4.49
1666 1675 4.221262 TGTGTAAACTGGATAGGCTAACGT 59.779 41.667 0.00 0.00 0.00 3.99
1667 1676 4.751060 TGTGTAAACTGGATAGGCTAACG 58.249 43.478 0.00 0.00 0.00 3.18
1668 1677 5.731591 ACTGTGTAAACTGGATAGGCTAAC 58.268 41.667 0.00 0.00 0.00 2.34
1669 1678 7.201974 GGATACTGTGTAAACTGGATAGGCTAA 60.202 40.741 0.00 0.00 0.00 3.09
1670 1679 6.267014 GGATACTGTGTAAACTGGATAGGCTA 59.733 42.308 0.00 0.00 0.00 3.93
1671 1680 5.070580 GGATACTGTGTAAACTGGATAGGCT 59.929 44.000 0.00 0.00 0.00 4.58
1672 1681 5.163343 TGGATACTGTGTAAACTGGATAGGC 60.163 44.000 0.00 0.00 37.61 3.93
1673 1682 6.479972 TGGATACTGTGTAAACTGGATAGG 57.520 41.667 0.00 0.00 37.61 2.57
1681 1690 5.548406 AGTCAGGTTGGATACTGTGTAAAC 58.452 41.667 0.00 0.00 36.17 2.01
1690 1699 3.547613 CGCGTACTAGTCAGGTTGGATAC 60.548 52.174 0.00 0.00 0.00 2.24
1695 1704 2.451132 CATCGCGTACTAGTCAGGTTG 58.549 52.381 5.77 0.00 0.00 3.77
1701 1710 3.120269 CCTGATACCATCGCGTACTAGTC 60.120 52.174 5.77 0.03 0.00 2.59
1709 1718 0.939577 CGGAACCTGATACCATCGCG 60.940 60.000 0.00 0.00 0.00 5.87
1728 1737 4.020751 TCCTATCATATCAGCTGGCACTTC 60.021 45.833 15.13 0.00 0.00 3.01
1766 1775 9.976255 TTTAACGAATATAACATGTGTAAGCAC 57.024 29.630 0.00 0.00 45.44 4.40
1791 1800 5.446607 GCGCATTTGGTTGTTTAGTTTTGTT 60.447 36.000 0.30 0.00 0.00 2.83
1793 1802 4.513581 GCGCATTTGGTTGTTTAGTTTTG 58.486 39.130 0.30 0.00 0.00 2.44
1798 1808 2.430546 TGGCGCATTTGGTTGTTTAG 57.569 45.000 10.83 0.00 0.00 1.85
1799 1809 2.890808 TTGGCGCATTTGGTTGTTTA 57.109 40.000 10.83 0.00 0.00 2.01
1813 1823 1.940613 GACCCATTAGCTACTTTGGCG 59.059 52.381 9.95 7.05 34.52 5.69
1814 1824 2.999331 TGACCCATTAGCTACTTTGGC 58.001 47.619 9.95 0.00 0.00 4.52
1822 1832 7.017319 AGTTTAACTACTTGACCCATTAGCT 57.983 36.000 0.00 0.00 0.00 3.32
1823 1833 6.035758 CGAGTTTAACTACTTGACCCATTAGC 59.964 42.308 0.00 0.00 32.23 3.09
1829 1839 3.431233 GCACGAGTTTAACTACTTGACCC 59.569 47.826 0.00 0.00 34.29 4.46
1836 1846 2.406357 GGTGACGCACGAGTTTAACTAC 59.594 50.000 0.00 0.00 34.83 2.73
1856 1866 2.028930 GTCAGAGTTCAGTACCACAGGG 60.029 54.545 0.00 0.00 41.29 4.45
1858 1868 2.628178 TGGTCAGAGTTCAGTACCACAG 59.372 50.000 0.00 0.00 35.34 3.66
1905 1915 7.340122 TGAGTGAATTAACAATGTCAACCAA 57.660 32.000 0.00 0.00 0.00 3.67
1921 1931 8.037166 GCTTTCCCAAAAGATAAATGAGTGAAT 58.963 33.333 2.21 0.00 43.90 2.57
1946 1957 3.757745 TGCATTAGCTACTTTTTCCGC 57.242 42.857 0.00 0.00 42.74 5.54
1948 1959 6.620678 TCATGTTGCATTAGCTACTTTTTCC 58.379 36.000 0.00 0.00 45.02 3.13
1966 1977 2.020720 TGTGCGGTGTCTTTTCATGTT 58.979 42.857 0.00 0.00 0.00 2.71
1967 1978 1.674359 TGTGCGGTGTCTTTTCATGT 58.326 45.000 0.00 0.00 0.00 3.21
1968 1979 2.653890 CTTGTGCGGTGTCTTTTCATG 58.346 47.619 0.00 0.00 0.00 3.07
1969 1980 1.001378 GCTTGTGCGGTGTCTTTTCAT 60.001 47.619 0.00 0.00 0.00 2.57
1970 1981 0.380378 GCTTGTGCGGTGTCTTTTCA 59.620 50.000 0.00 0.00 0.00 2.69
1971 1982 0.663153 AGCTTGTGCGGTGTCTTTTC 59.337 50.000 0.00 0.00 45.42 2.29
1973 1984 0.179045 AGAGCTTGTGCGGTGTCTTT 60.179 50.000 0.00 0.00 45.42 2.52
1974 1985 0.601311 GAGAGCTTGTGCGGTGTCTT 60.601 55.000 0.00 0.00 45.42 3.01
1981 2000 4.604843 TTTTATCATGAGAGCTTGTGCG 57.395 40.909 0.09 0.00 45.42 5.34
2068 2529 9.699410 TGGTCTATGAATCTGGATGTAATTTTT 57.301 29.630 0.00 0.00 0.00 1.94
2069 2530 9.125026 GTGGTCTATGAATCTGGATGTAATTTT 57.875 33.333 0.00 0.00 0.00 1.82
2072 2588 6.560304 AGGTGGTCTATGAATCTGGATGTAAT 59.440 38.462 0.00 0.00 0.00 1.89
2073 2589 5.905331 AGGTGGTCTATGAATCTGGATGTAA 59.095 40.000 0.00 0.00 0.00 2.41
2076 2592 4.504514 CCAGGTGGTCTATGAATCTGGATG 60.505 50.000 0.00 0.00 41.87 3.51
2078 2594 3.041211 CCAGGTGGTCTATGAATCTGGA 58.959 50.000 0.00 0.00 41.87 3.86
2080 2596 2.171237 TGCCAGGTGGTCTATGAATCTG 59.829 50.000 0.00 0.00 37.57 2.90
2084 2600 1.281867 CCTTGCCAGGTGGTCTATGAA 59.718 52.381 0.00 0.00 35.06 2.57
2088 2604 0.178903 AGTCCTTGCCAGGTGGTCTA 60.179 55.000 3.35 0.00 41.69 2.59
2093 2609 1.813513 CTTGTAGTCCTTGCCAGGTG 58.186 55.000 3.35 0.00 41.69 4.00
2094 2610 0.036875 GCTTGTAGTCCTTGCCAGGT 59.963 55.000 3.35 0.00 41.69 4.00
2095 2611 0.036732 TGCTTGTAGTCCTTGCCAGG 59.963 55.000 0.00 0.00 42.50 4.45
2097 2613 2.161855 CAATGCTTGTAGTCCTTGCCA 58.838 47.619 0.00 0.00 0.00 4.92
2098 2614 2.436417 TCAATGCTTGTAGTCCTTGCC 58.564 47.619 0.00 0.00 0.00 4.52
2100 2616 3.425359 CGCTTCAATGCTTGTAGTCCTTG 60.425 47.826 0.00 0.00 31.53 3.61
2101 2617 2.744202 CGCTTCAATGCTTGTAGTCCTT 59.256 45.455 0.00 0.00 31.53 3.36
2102 2618 2.028112 TCGCTTCAATGCTTGTAGTCCT 60.028 45.455 0.00 0.00 31.53 3.85
2103 2619 2.346803 TCGCTTCAATGCTTGTAGTCC 58.653 47.619 0.00 0.00 31.53 3.85
2104 2620 2.222908 GCTCGCTTCAATGCTTGTAGTC 60.223 50.000 0.00 0.00 31.53 2.59
2105 2621 1.734465 GCTCGCTTCAATGCTTGTAGT 59.266 47.619 0.00 0.00 31.53 2.73
2106 2622 2.005451 AGCTCGCTTCAATGCTTGTAG 58.995 47.619 0.00 0.00 30.96 2.74
2107 2623 2.099141 AGCTCGCTTCAATGCTTGTA 57.901 45.000 0.00 0.00 30.96 2.41
2108 2624 2.099141 TAGCTCGCTTCAATGCTTGT 57.901 45.000 0.00 0.00 37.02 3.16
2109 2625 2.674852 TCTTAGCTCGCTTCAATGCTTG 59.325 45.455 0.00 0.00 37.02 4.01
2110 2626 2.675348 GTCTTAGCTCGCTTCAATGCTT 59.325 45.455 0.00 0.00 37.02 3.91
2111 2627 2.093764 AGTCTTAGCTCGCTTCAATGCT 60.094 45.455 0.00 0.00 39.30 3.79
2112 2628 2.275318 AGTCTTAGCTCGCTTCAATGC 58.725 47.619 0.00 0.00 0.00 3.56
2134 2650 0.179097 GGAGAGGAGATGACGGCAAC 60.179 60.000 0.00 0.00 0.00 4.17
2135 2651 1.330655 GGGAGAGGAGATGACGGCAA 61.331 60.000 0.00 0.00 0.00 4.52
2136 2652 1.758514 GGGAGAGGAGATGACGGCA 60.759 63.158 0.00 0.00 0.00 5.69
2137 2653 1.456705 AGGGAGAGGAGATGACGGC 60.457 63.158 0.00 0.00 0.00 5.68
2138 2654 1.169661 CGAGGGAGAGGAGATGACGG 61.170 65.000 0.00 0.00 0.00 4.79
2139 2655 1.791103 GCGAGGGAGAGGAGATGACG 61.791 65.000 0.00 0.00 0.00 4.35
2140 2656 1.460273 GGCGAGGGAGAGGAGATGAC 61.460 65.000 0.00 0.00 0.00 3.06
2141 2657 1.152652 GGCGAGGGAGAGGAGATGA 60.153 63.158 0.00 0.00 0.00 2.92
2142 2658 2.560119 CGGCGAGGGAGAGGAGATG 61.560 68.421 0.00 0.00 0.00 2.90
2143 2659 2.203422 CGGCGAGGGAGAGGAGAT 60.203 66.667 0.00 0.00 0.00 2.75
2144 2660 4.507916 CCGGCGAGGGAGAGGAGA 62.508 72.222 9.30 0.00 35.97 3.71
2145 2661 4.507916 TCCGGCGAGGGAGAGGAG 62.508 72.222 9.30 0.00 41.52 3.69
2158 2674 1.077787 TAATTGTGCCTGGCTCCGG 60.078 57.895 21.03 0.00 0.00 5.14
2159 2675 0.392998 ACTAATTGTGCCTGGCTCCG 60.393 55.000 21.03 5.12 0.00 4.63
2160 2676 1.839424 AACTAATTGTGCCTGGCTCC 58.161 50.000 21.03 10.95 0.00 4.70
2161 2677 5.368989 ACTATAACTAATTGTGCCTGGCTC 58.631 41.667 21.03 17.16 0.00 4.70
2162 2678 5.373812 ACTATAACTAATTGTGCCTGGCT 57.626 39.130 21.03 0.83 0.00 4.75
2163 2679 6.424207 GTCTACTATAACTAATTGTGCCTGGC 59.576 42.308 12.87 12.87 0.00 4.85
2164 2680 7.497595 TGTCTACTATAACTAATTGTGCCTGG 58.502 38.462 0.00 0.00 0.00 4.45
2165 2681 8.198109 ACTGTCTACTATAACTAATTGTGCCTG 58.802 37.037 0.00 0.00 0.00 4.85
2166 2682 8.307582 ACTGTCTACTATAACTAATTGTGCCT 57.692 34.615 0.00 0.00 0.00 4.75
2167 2683 7.378995 CGACTGTCTACTATAACTAATTGTGCC 59.621 40.741 6.21 0.00 0.00 5.01
2168 2684 7.378995 CCGACTGTCTACTATAACTAATTGTGC 59.621 40.741 6.21 0.00 0.00 4.57
2169 2685 8.618677 TCCGACTGTCTACTATAACTAATTGTG 58.381 37.037 6.21 0.00 0.00 3.33
2170 2686 8.743085 TCCGACTGTCTACTATAACTAATTGT 57.257 34.615 6.21 0.00 0.00 2.71
2173 2689 9.406113 ACTTTCCGACTGTCTACTATAACTAAT 57.594 33.333 6.21 0.00 0.00 1.73
2174 2690 8.798859 ACTTTCCGACTGTCTACTATAACTAA 57.201 34.615 6.21 0.00 0.00 2.24
2175 2691 7.223582 CGACTTTCCGACTGTCTACTATAACTA 59.776 40.741 6.21 0.00 0.00 2.24
2176 2692 6.036953 CGACTTTCCGACTGTCTACTATAACT 59.963 42.308 6.21 0.00 0.00 2.24
2177 2693 6.183360 ACGACTTTCCGACTGTCTACTATAAC 60.183 42.308 6.21 0.00 0.00 1.89
2178 2694 5.877012 ACGACTTTCCGACTGTCTACTATAA 59.123 40.000 6.21 0.00 0.00 0.98
2179 2695 5.292834 CACGACTTTCCGACTGTCTACTATA 59.707 44.000 6.21 0.00 0.00 1.31
2180 2696 4.094590 CACGACTTTCCGACTGTCTACTAT 59.905 45.833 6.21 0.00 0.00 2.12
2181 2697 3.434641 CACGACTTTCCGACTGTCTACTA 59.565 47.826 6.21 0.00 0.00 1.82
2182 2698 2.225963 CACGACTTTCCGACTGTCTACT 59.774 50.000 6.21 0.00 0.00 2.57
2183 2699 2.582687 CACGACTTTCCGACTGTCTAC 58.417 52.381 6.21 0.00 0.00 2.59
2184 2700 1.068748 GCACGACTTTCCGACTGTCTA 60.069 52.381 6.21 0.00 0.00 2.59
2185 2701 0.318784 GCACGACTTTCCGACTGTCT 60.319 55.000 6.21 0.00 0.00 3.41
2186 2702 0.318784 AGCACGACTTTCCGACTGTC 60.319 55.000 0.00 0.00 0.00 3.51
2187 2703 0.956633 TAGCACGACTTTCCGACTGT 59.043 50.000 0.00 0.00 0.00 3.55
2188 2704 1.986378 CTTAGCACGACTTTCCGACTG 59.014 52.381 0.00 0.00 0.00 3.51
2189 2705 1.067776 CCTTAGCACGACTTTCCGACT 60.068 52.381 0.00 0.00 0.00 4.18
2190 2706 1.347320 CCTTAGCACGACTTTCCGAC 58.653 55.000 0.00 0.00 0.00 4.79
2191 2707 0.389426 GCCTTAGCACGACTTTCCGA 60.389 55.000 0.00 0.00 39.53 4.55
2192 2708 1.359459 GGCCTTAGCACGACTTTCCG 61.359 60.000 0.00 0.00 42.56 4.30
2193 2709 0.036294 AGGCCTTAGCACGACTTTCC 60.036 55.000 0.00 0.00 42.56 3.13
2194 2710 1.809684 AAGGCCTTAGCACGACTTTC 58.190 50.000 18.87 0.00 42.56 2.62
2195 2711 3.629142 ATAAGGCCTTAGCACGACTTT 57.371 42.857 28.35 7.46 42.56 2.66
2196 2712 3.069729 CCTATAAGGCCTTAGCACGACTT 59.930 47.826 28.35 12.95 42.56 3.01
2197 2713 2.628657 CCTATAAGGCCTTAGCACGACT 59.371 50.000 28.35 13.65 42.56 4.18
2198 2714 2.626743 TCCTATAAGGCCTTAGCACGAC 59.373 50.000 28.35 0.00 42.56 4.34
2199 2715 2.626743 GTCCTATAAGGCCTTAGCACGA 59.373 50.000 28.35 17.85 42.56 4.35
2200 2716 2.288886 GGTCCTATAAGGCCTTAGCACG 60.289 54.545 28.35 16.06 42.56 5.34
2201 2717 2.704065 TGGTCCTATAAGGCCTTAGCAC 59.296 50.000 28.35 20.01 42.56 4.40
2202 2718 3.054779 TGGTCCTATAAGGCCTTAGCA 57.945 47.619 28.35 20.08 42.56 3.49
2203 2719 3.135895 TGTTGGTCCTATAAGGCCTTAGC 59.864 47.826 28.35 17.79 34.61 3.09
2204 2720 4.163458 TGTGTTGGTCCTATAAGGCCTTAG 59.837 45.833 28.35 18.46 34.61 2.18
2205 2721 4.080751 GTGTGTTGGTCCTATAAGGCCTTA 60.081 45.833 27.11 27.11 34.61 2.69
2206 2722 2.916934 TGTGTTGGTCCTATAAGGCCTT 59.083 45.455 24.18 24.18 34.61 4.35
2207 2723 2.238898 GTGTGTTGGTCCTATAAGGCCT 59.761 50.000 0.00 0.00 34.61 5.19
2208 2724 2.640184 GTGTGTTGGTCCTATAAGGCC 58.360 52.381 0.00 0.00 34.61 5.19
2209 2725 2.026636 TGGTGTGTTGGTCCTATAAGGC 60.027 50.000 0.00 0.00 34.61 4.35
2210 2726 3.517901 TCTGGTGTGTTGGTCCTATAAGG 59.482 47.826 0.00 0.00 36.46 2.69
2211 2727 4.819105 TCTGGTGTGTTGGTCCTATAAG 57.181 45.455 0.00 0.00 0.00 1.73
2212 2728 4.348461 TGTTCTGGTGTGTTGGTCCTATAA 59.652 41.667 0.00 0.00 0.00 0.98
2213 2729 3.904965 TGTTCTGGTGTGTTGGTCCTATA 59.095 43.478 0.00 0.00 0.00 1.31
2214 2730 2.708861 TGTTCTGGTGTGTTGGTCCTAT 59.291 45.455 0.00 0.00 0.00 2.57
2215 2731 2.120312 TGTTCTGGTGTGTTGGTCCTA 58.880 47.619 0.00 0.00 0.00 2.94
2216 2732 0.916086 TGTTCTGGTGTGTTGGTCCT 59.084 50.000 0.00 0.00 0.00 3.85
2217 2733 1.880027 GATGTTCTGGTGTGTTGGTCC 59.120 52.381 0.00 0.00 0.00 4.46
2218 2734 2.571212 TGATGTTCTGGTGTGTTGGTC 58.429 47.619 0.00 0.00 0.00 4.02
2219 2735 2.687935 GTTGATGTTCTGGTGTGTTGGT 59.312 45.455 0.00 0.00 0.00 3.67
2220 2736 2.951642 AGTTGATGTTCTGGTGTGTTGG 59.048 45.455 0.00 0.00 0.00 3.77
2221 2737 3.793129 GCAGTTGATGTTCTGGTGTGTTG 60.793 47.826 0.00 0.00 32.94 3.33
2222 2738 2.358898 GCAGTTGATGTTCTGGTGTGTT 59.641 45.455 0.00 0.00 32.94 3.32
2223 2739 1.949525 GCAGTTGATGTTCTGGTGTGT 59.050 47.619 0.00 0.00 32.94 3.72
2224 2740 1.267806 GGCAGTTGATGTTCTGGTGTG 59.732 52.381 0.00 0.00 32.94 3.82
2225 2741 1.609208 GGCAGTTGATGTTCTGGTGT 58.391 50.000 0.00 0.00 32.94 4.16
2226 2742 0.518636 CGGCAGTTGATGTTCTGGTG 59.481 55.000 0.00 0.00 32.94 4.17
2227 2743 1.237285 GCGGCAGTTGATGTTCTGGT 61.237 55.000 0.00 0.00 32.94 4.00
2228 2744 1.503542 GCGGCAGTTGATGTTCTGG 59.496 57.895 0.00 0.00 32.94 3.86
2229 2745 1.503542 GGCGGCAGTTGATGTTCTG 59.496 57.895 3.07 0.00 35.12 3.02
2230 2746 2.034879 CGGCGGCAGTTGATGTTCT 61.035 57.895 10.53 0.00 0.00 3.01
2231 2747 1.369091 ATCGGCGGCAGTTGATGTTC 61.369 55.000 10.53 0.00 0.00 3.18
2232 2748 1.377202 ATCGGCGGCAGTTGATGTT 60.377 52.632 10.53 0.00 0.00 2.71
2233 2749 2.108514 CATCGGCGGCAGTTGATGT 61.109 57.895 10.53 0.00 34.83 3.06
2234 2750 1.368345 TTCATCGGCGGCAGTTGATG 61.368 55.000 10.53 13.55 39.59 3.07
2235 2751 1.078497 TTCATCGGCGGCAGTTGAT 60.078 52.632 10.53 0.00 0.00 2.57
2236 2752 1.741401 CTTCATCGGCGGCAGTTGA 60.741 57.895 10.53 9.35 0.00 3.18
2237 2753 2.787249 CTTCATCGGCGGCAGTTG 59.213 61.111 10.53 3.38 0.00 3.16
2238 2754 3.127533 GCTTCATCGGCGGCAGTT 61.128 61.111 10.53 0.00 0.00 3.16
2245 2761 3.944422 TCTAAATTTCGCTTCATCGGC 57.056 42.857 0.00 0.00 0.00 5.54
2246 2762 4.376413 CCGATCTAAATTTCGCTTCATCGG 60.376 45.833 12.88 12.88 43.93 4.18
2247 2763 4.444388 TCCGATCTAAATTTCGCTTCATCG 59.556 41.667 0.00 0.00 34.10 3.84
2248 2764 5.907197 TCCGATCTAAATTTCGCTTCATC 57.093 39.130 0.00 0.00 34.10 2.92
2249 2765 5.237344 CCTTCCGATCTAAATTTCGCTTCAT 59.763 40.000 0.00 0.00 34.10 2.57
2250 2766 4.570772 CCTTCCGATCTAAATTTCGCTTCA 59.429 41.667 0.00 0.00 34.10 3.02
2251 2767 4.809426 TCCTTCCGATCTAAATTTCGCTTC 59.191 41.667 0.00 0.00 34.10 3.86
2252 2768 4.571176 GTCCTTCCGATCTAAATTTCGCTT 59.429 41.667 0.00 0.00 34.10 4.68
2253 2769 4.120589 GTCCTTCCGATCTAAATTTCGCT 58.879 43.478 0.00 0.00 34.10 4.93
2254 2770 3.247886 GGTCCTTCCGATCTAAATTTCGC 59.752 47.826 0.00 0.00 34.10 4.70
2255 2771 3.808174 GGGTCCTTCCGATCTAAATTTCG 59.192 47.826 0.00 0.00 37.00 3.46
2268 2784 0.903454 TCTTCAGGTCGGGTCCTTCC 60.903 60.000 0.00 0.00 35.37 3.46
2269 2785 0.246910 GTCTTCAGGTCGGGTCCTTC 59.753 60.000 0.00 0.00 35.37 3.46
2270 2786 0.471211 TGTCTTCAGGTCGGGTCCTT 60.471 55.000 0.00 0.00 35.37 3.36
2271 2787 1.155390 TGTCTTCAGGTCGGGTCCT 59.845 57.895 0.00 0.00 38.51 3.85
2272 2788 1.292541 GTGTCTTCAGGTCGGGTCC 59.707 63.158 0.00 0.00 0.00 4.46
2273 2789 0.608640 ATGTGTCTTCAGGTCGGGTC 59.391 55.000 0.00 0.00 0.00 4.46
2274 2790 0.321671 CATGTGTCTTCAGGTCGGGT 59.678 55.000 0.00 0.00 0.00 5.28
2275 2791 0.608130 TCATGTGTCTTCAGGTCGGG 59.392 55.000 0.00 0.00 0.00 5.14
2276 2792 2.069273 GTTCATGTGTCTTCAGGTCGG 58.931 52.381 0.00 0.00 0.00 4.79
2277 2793 2.733552 CTGTTCATGTGTCTTCAGGTCG 59.266 50.000 0.00 0.00 0.00 4.79
2278 2794 3.993081 CTCTGTTCATGTGTCTTCAGGTC 59.007 47.826 0.00 0.00 0.00 3.85
2279 2795 3.643320 TCTCTGTTCATGTGTCTTCAGGT 59.357 43.478 0.00 0.00 0.00 4.00
2280 2796 3.993081 GTCTCTGTTCATGTGTCTTCAGG 59.007 47.826 0.00 0.00 0.00 3.86
2281 2797 3.672397 CGTCTCTGTTCATGTGTCTTCAG 59.328 47.826 0.00 0.00 0.00 3.02
2282 2798 3.317993 TCGTCTCTGTTCATGTGTCTTCA 59.682 43.478 0.00 0.00 0.00 3.02
2283 2799 3.902150 TCGTCTCTGTTCATGTGTCTTC 58.098 45.455 0.00 0.00 0.00 2.87
2284 2800 4.322080 TTCGTCTCTGTTCATGTGTCTT 57.678 40.909 0.00 0.00 0.00 3.01
2285 2801 4.527509 ATTCGTCTCTGTTCATGTGTCT 57.472 40.909 0.00 0.00 0.00 3.41
2286 2802 6.586463 TCTTTATTCGTCTCTGTTCATGTGTC 59.414 38.462 0.00 0.00 0.00 3.67
2287 2803 6.366332 GTCTTTATTCGTCTCTGTTCATGTGT 59.634 38.462 0.00 0.00 0.00 3.72
2288 2804 6.183360 GGTCTTTATTCGTCTCTGTTCATGTG 60.183 42.308 0.00 0.00 0.00 3.21
2289 2805 5.869888 GGTCTTTATTCGTCTCTGTTCATGT 59.130 40.000 0.00 0.00 0.00 3.21
2290 2806 5.004821 CGGTCTTTATTCGTCTCTGTTCATG 59.995 44.000 0.00 0.00 0.00 3.07
2291 2807 5.103000 CGGTCTTTATTCGTCTCTGTTCAT 58.897 41.667 0.00 0.00 0.00 2.57
2292 2808 4.482386 CGGTCTTTATTCGTCTCTGTTCA 58.518 43.478 0.00 0.00 0.00 3.18
2293 2809 3.858238 CCGGTCTTTATTCGTCTCTGTTC 59.142 47.826 0.00 0.00 0.00 3.18
2294 2810 3.508793 TCCGGTCTTTATTCGTCTCTGTT 59.491 43.478 0.00 0.00 0.00 3.16
2295 2811 3.087031 TCCGGTCTTTATTCGTCTCTGT 58.913 45.455 0.00 0.00 0.00 3.41
2296 2812 3.777465 TCCGGTCTTTATTCGTCTCTG 57.223 47.619 0.00 0.00 0.00 3.35
2297 2813 3.318557 GGATCCGGTCTTTATTCGTCTCT 59.681 47.826 0.00 0.00 0.00 3.10
2298 2814 3.640592 GGATCCGGTCTTTATTCGTCTC 58.359 50.000 0.00 0.00 0.00 3.36
2299 2815 2.034305 CGGATCCGGTCTTTATTCGTCT 59.966 50.000 26.95 0.00 35.56 4.18
2300 2816 2.033801 TCGGATCCGGTCTTTATTCGTC 59.966 50.000 32.79 0.00 40.25 4.20
2301 2817 2.026641 TCGGATCCGGTCTTTATTCGT 58.973 47.619 32.79 0.00 40.25 3.85
2302 2818 2.662700 CTCGGATCCGGTCTTTATTCG 58.337 52.381 32.79 3.74 40.25 3.34
2303 2819 2.223971 TGCTCGGATCCGGTCTTTATTC 60.224 50.000 32.79 12.06 40.25 1.75
2304 2820 1.760613 TGCTCGGATCCGGTCTTTATT 59.239 47.619 32.79 0.00 40.25 1.40
2305 2821 1.341531 CTGCTCGGATCCGGTCTTTAT 59.658 52.381 32.79 0.00 40.25 1.40
2306 2822 0.744874 CTGCTCGGATCCGGTCTTTA 59.255 55.000 32.79 12.48 40.25 1.85
2307 2823 0.970937 TCTGCTCGGATCCGGTCTTT 60.971 55.000 32.79 0.00 40.25 2.52
2308 2824 0.757188 ATCTGCTCGGATCCGGTCTT 60.757 55.000 32.79 11.35 40.25 3.01
2309 2825 1.152652 ATCTGCTCGGATCCGGTCT 60.153 57.895 32.79 10.14 40.25 3.85
2310 2826 1.287503 GATCTGCTCGGATCCGGTC 59.712 63.158 32.79 23.58 40.25 4.79
2311 2827 3.449349 GATCTGCTCGGATCCGGT 58.551 61.111 32.79 12.72 40.25 5.28
2315 2831 0.465705 TTGGTGGATCTGCTCGGATC 59.534 55.000 9.62 9.62 40.78 3.36
2316 2832 0.911769 TTTGGTGGATCTGCTCGGAT 59.088 50.000 0.00 0.00 0.00 4.18
2317 2833 0.250234 CTTTGGTGGATCTGCTCGGA 59.750 55.000 0.00 0.00 0.00 4.55
2318 2834 0.250234 TCTTTGGTGGATCTGCTCGG 59.750 55.000 0.00 0.00 0.00 4.63
2319 2835 1.363744 GTCTTTGGTGGATCTGCTCG 58.636 55.000 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.