Multiple sequence alignment - TraesCS5A01G452400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G452400 chr5A 100.000 3913 0 0 1 3913 634061846 634057934 0.000000e+00 7227.0
1 TraesCS5A01G452400 chr5A 80.000 305 42 14 1762 2057 12621102 12621396 1.420000e-49 207.0
2 TraesCS5A01G452400 chr5A 79.868 303 46 12 1762 2057 69011958 69011664 1.420000e-49 207.0
3 TraesCS5A01G452400 chr5A 83.249 197 31 2 996 1191 12620506 12620701 3.110000e-41 180.0
4 TraesCS5A01G452400 chr5A 85.000 120 15 2 1622 1739 516606789 516606907 6.870000e-23 119.0
5 TraesCS5A01G452400 chr5D 83.791 2332 242 75 2 2278 506246745 506244495 0.000000e+00 2087.0
6 TraesCS5A01G452400 chr5D 92.714 549 30 5 2648 3188 506243911 506243365 0.000000e+00 784.0
7 TraesCS5A01G452400 chr5D 79.926 538 75 24 2449 2960 497944500 497943970 7.990000e-97 364.0
8 TraesCS5A01G452400 chr5D 90.435 230 18 3 2448 2674 506244157 506243929 2.290000e-77 300.0
9 TraesCS5A01G452400 chr5D 87.826 115 9 4 3235 3346 502587450 502587562 3.170000e-26 130.0
10 TraesCS5A01G452400 chr5B 89.176 850 51 21 1494 2303 637125289 637124441 0.000000e+00 1022.0
11 TraesCS5A01G452400 chr5B 90.438 753 49 13 2448 3186 637124186 637123443 0.000000e+00 970.0
12 TraesCS5A01G452400 chr5B 89.867 750 61 10 2448 3186 637019089 637018344 0.000000e+00 950.0
13 TraesCS5A01G452400 chr5B 87.748 808 81 11 659 1457 637126082 637125284 0.000000e+00 928.0
14 TraesCS5A01G452400 chr5B 90.429 700 47 12 2501 3184 637121013 637120318 0.000000e+00 904.0
15 TraesCS5A01G452400 chr5B 89.639 637 31 10 2 635 637126756 637126152 0.000000e+00 778.0
16 TraesCS5A01G452400 chr5B 88.515 653 54 14 2501 3141 637114307 637113664 0.000000e+00 771.0
17 TraesCS5A01G452400 chr5B 87.081 627 62 15 2501 3117 636961759 636961142 0.000000e+00 691.0
18 TraesCS5A01G452400 chr5B 90.476 441 34 4 2675 3113 636989824 636989390 3.390000e-160 575.0
19 TraesCS5A01G452400 chr5B 87.500 440 43 4 2675 3104 637045119 637044682 7.550000e-137 497.0
20 TraesCS5A01G452400 chr5B 87.500 288 25 9 2846 3131 637013959 637013681 4.880000e-84 322.0
21 TraesCS5A01G452400 chr5B 82.642 265 34 10 2160 2413 636990726 636990463 1.410000e-54 224.0
22 TraesCS5A01G452400 chr5B 82.197 264 33 11 2160 2413 637111582 637111323 8.520000e-52 215.0
23 TraesCS5A01G452400 chr5B 86.705 173 15 5 3736 3908 557406647 557406483 6.680000e-43 185.0
24 TraesCS5A01G452400 chr5B 84.270 178 21 3 3736 3913 474747508 474747338 2.420000e-37 167.0
25 TraesCS5A01G452400 chr2A 77.362 508 81 27 1755 2251 685752213 685751729 1.790000e-68 270.0
26 TraesCS5A01G452400 chr2A 80.263 304 42 12 1762 2057 137270911 137270618 3.060000e-51 213.0
27 TraesCS5A01G452400 chr2A 79.734 301 50 10 1762 2057 660108632 660108926 1.420000e-49 207.0
28 TraesCS5A01G452400 chr2A 84.925 199 28 2 996 1193 685752852 685752655 2.380000e-47 200.0
29 TraesCS5A01G452400 chr2A 83.854 192 29 2 996 1186 137271508 137271318 8.640000e-42 182.0
30 TraesCS5A01G452400 chr2B 77.778 468 73 24 1779 2236 647742906 647742460 3.880000e-65 259.0
31 TraesCS5A01G452400 chr2B 92.053 151 12 0 925 1075 149998936 149998786 3.060000e-51 213.0
32 TraesCS5A01G452400 chr2B 88.333 180 11 2 906 1075 707697230 707697051 1.420000e-49 207.0
33 TraesCS5A01G452400 chr2B 85.455 165 16 3 3235 3391 570900276 570900440 8.700000e-37 165.0
34 TraesCS5A01G452400 chr2B 88.571 70 7 1 3840 3908 382947572 382947641 2.510000e-12 84.2
35 TraesCS5A01G452400 chr2D 77.516 467 78 21 1779 2237 543047151 543046704 5.020000e-64 255.0
36 TraesCS5A01G452400 chr2D 83.916 143 12 6 3235 3368 21460054 21459914 4.100000e-25 126.0
37 TraesCS5A01G452400 chr2D 79.518 166 25 4 3235 3391 113649495 113649330 4.130000e-20 110.0
38 TraesCS5A01G452400 chr7D 81.250 352 21 26 3562 3908 164763810 164764121 3.910000e-60 243.0
39 TraesCS5A01G452400 chr7D 88.272 162 13 1 3237 3392 164763359 164763520 5.160000e-44 189.0
40 TraesCS5A01G452400 chr7D 85.311 177 19 4 3737 3913 534658611 534658442 4.020000e-40 176.0
41 TraesCS5A01G452400 chr7D 87.903 124 8 4 3785 3908 420084565 420084681 5.270000e-29 139.0
42 TraesCS5A01G452400 chr7D 85.217 115 10 4 3799 3913 173714270 173714163 1.150000e-20 111.0
43 TraesCS5A01G452400 chr7D 84.615 91 6 1 3632 3714 420084074 420084164 2.510000e-12 84.2
44 TraesCS5A01G452400 chr7D 92.593 54 4 0 3511 3564 164763724 164763777 1.170000e-10 78.7
45 TraesCS5A01G452400 chr3B 88.889 180 10 2 906 1075 53615612 53615791 3.060000e-51 213.0
46 TraesCS5A01G452400 chr4B 79.085 306 53 8 1762 2062 662856769 662857068 2.380000e-47 200.0
47 TraesCS5A01G452400 chr6B 86.667 180 14 5 906 1075 8529017 8529196 1.440000e-44 191.0
48 TraesCS5A01G452400 chr4A 86.111 180 15 2 906 1075 672218349 672218528 6.680000e-43 185.0
49 TraesCS5A01G452400 chr1A 83.333 198 29 2 996 1191 310700142 310700337 3.110000e-41 180.0
50 TraesCS5A01G452400 chr1B 92.982 114 8 0 1741 1854 586691904 586691791 2.420000e-37 167.0
51 TraesCS5A01G452400 chr3A 84.848 165 11 10 3233 3386 77481728 77481889 1.880000e-33 154.0
52 TraesCS5A01G452400 chr6D 83.333 174 20 6 3735 3908 400555700 400555536 6.770000e-33 152.0
53 TraesCS5A01G452400 chr3D 81.977 172 19 10 3233 3392 287294557 287294728 6.820000e-28 135.0
54 TraesCS5A01G452400 chr3D 88.764 89 9 1 1622 1710 322459511 322459598 1.490000e-19 108.0
55 TraesCS5A01G452400 chr6A 86.022 93 5 6 3307 3391 480808924 480808832 4.160000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G452400 chr5A 634057934 634061846 3912 True 7227.0 7227 100.0000 1 3913 1 chr5A.!!$R2 3912
1 TraesCS5A01G452400 chr5D 506243365 506246745 3380 True 1057.0 2087 88.9800 2 3188 3 chr5D.!!$R2 3186
2 TraesCS5A01G452400 chr5D 497943970 497944500 530 True 364.0 364 79.9260 2449 2960 1 chr5D.!!$R1 511
3 TraesCS5A01G452400 chr5B 637018344 637019089 745 True 950.0 950 89.8670 2448 3186 1 chr5B.!!$R5 738
4 TraesCS5A01G452400 chr5B 637120318 637126756 6438 True 920.4 1022 89.4860 2 3186 5 chr5B.!!$R9 3184
5 TraesCS5A01G452400 chr5B 636961142 636961759 617 True 691.0 691 87.0810 2501 3117 1 chr5B.!!$R3 616
6 TraesCS5A01G452400 chr5B 637111323 637114307 2984 True 493.0 771 85.3560 2160 3141 2 chr5B.!!$R8 981
7 TraesCS5A01G452400 chr5B 636989390 636990726 1336 True 399.5 575 86.5590 2160 3113 2 chr5B.!!$R7 953
8 TraesCS5A01G452400 chr2A 685751729 685752852 1123 True 235.0 270 81.1435 996 2251 2 chr2A.!!$R2 1255

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
685 749 0.463116 GGTTACATGGGCCTACACGG 60.463 60.0 4.53 0.0 0.0 4.94 F
1480 1701 0.038067 CCCATGCCATTGTGTGTGTG 60.038 55.0 0.00 0.0 0.0 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2332 2758 0.179000 ACTTCCAGGCTCGCAATAGG 59.821 55.0 0.0 0.0 0.0 2.57 R
3188 8283 0.110486 TCACCCCTTTGGAGTTGCTC 59.890 55.0 0.0 0.0 38.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 4.952335 AGCCAAGCAACAATTCTAGCTAAT 59.048 37.500 0.00 0.00 36.07 1.73
44 47 7.286316 AGCCAAGCAACAATTCTAGCTAATAAT 59.714 33.333 0.00 0.00 36.07 1.28
168 171 4.785950 CTCACGAGCCGAATCGAA 57.214 55.556 14.81 3.47 45.56 3.71
231 235 3.555586 GCACAAGAAGATGCAATGGGTTT 60.556 43.478 0.00 0.00 41.65 3.27
237 241 2.102578 AGATGCAATGGGTTTACTGGC 58.897 47.619 0.00 0.00 0.00 4.85
248 252 3.313690 GGTTTACTGGCGAAACAAATGG 58.686 45.455 10.42 0.00 38.32 3.16
250 254 3.907894 TTACTGGCGAAACAAATGGTC 57.092 42.857 0.00 0.00 0.00 4.02
257 261 3.243401 GGCGAAACAAATGGTCTTTGTCT 60.243 43.478 4.02 0.00 41.30 3.41
258 262 4.359706 GCGAAACAAATGGTCTTTGTCTT 58.640 39.130 4.02 2.23 41.30 3.01
259 263 4.803613 GCGAAACAAATGGTCTTTGTCTTT 59.196 37.500 4.02 0.00 41.30 2.52
260 264 5.290885 GCGAAACAAATGGTCTTTGTCTTTT 59.709 36.000 4.02 0.00 41.30 2.27
261 265 6.695245 CGAAACAAATGGTCTTTGTCTTTTG 58.305 36.000 4.02 0.00 41.30 2.44
262 266 6.529829 CGAAACAAATGGTCTTTGTCTTTTGA 59.470 34.615 4.02 0.00 41.30 2.69
399 403 2.270205 CTCGCCCACCAGCTCATT 59.730 61.111 0.00 0.00 0.00 2.57
510 514 4.838486 GCGCGGACGGAGACAGAG 62.838 72.222 8.83 0.00 40.57 3.35
511 515 3.125573 CGCGGACGGAGACAGAGA 61.126 66.667 0.00 0.00 34.97 3.10
512 516 2.795297 GCGGACGGAGACAGAGAG 59.205 66.667 0.00 0.00 0.00 3.20
570 574 2.278206 CGATCAGGAGGACACGCG 60.278 66.667 3.53 3.53 0.00 6.01
685 749 0.463116 GGTTACATGGGCCTACACGG 60.463 60.000 4.53 0.00 0.00 4.94
785 849 1.995626 CCATCCAGACGACCCCCTT 60.996 63.158 0.00 0.00 0.00 3.95
961 1041 1.222936 CATTTGCTCCCGCTCCTCT 59.777 57.895 0.00 0.00 36.97 3.69
980 1060 3.164269 CCGGATCTGACCCTGGGG 61.164 72.222 18.88 7.87 42.03 4.96
1242 1374 3.893914 CTTGCTCGTGCGTTCGTGC 62.894 63.158 16.58 16.58 46.00 5.34
1251 1383 2.343246 CGTGCGTTCGTGCTTAGATTTA 59.657 45.455 0.00 0.00 35.36 1.40
1268 1402 0.108992 TTAAGCGTTCGAGGATGCGT 60.109 50.000 0.00 0.00 0.00 5.24
1270 1404 0.108992 AAGCGTTCGAGGATGCGTTA 60.109 50.000 0.00 0.00 0.00 3.18
1271 1405 0.801067 AGCGTTCGAGGATGCGTTAC 60.801 55.000 0.00 0.00 0.00 2.50
1274 1408 1.343506 GTTCGAGGATGCGTTACGTT 58.656 50.000 6.63 0.00 0.00 3.99
1283 1417 1.424403 TGCGTTACGTTGGATCTGTG 58.576 50.000 6.63 0.00 0.00 3.66
1289 1423 0.321671 ACGTTGGATCTGTGACTGGG 59.678 55.000 0.00 0.00 0.00 4.45
1292 1426 1.347707 GTTGGATCTGTGACTGGGTCA 59.652 52.381 0.00 0.00 40.50 4.02
1306 1524 1.003696 TGGGTCATTTGTATGCGGTGA 59.996 47.619 0.00 0.00 0.00 4.02
1307 1525 1.400494 GGGTCATTTGTATGCGGTGAC 59.600 52.381 5.03 5.03 38.69 3.67
1309 1527 2.351726 GGTCATTTGTATGCGGTGACTC 59.648 50.000 10.93 1.81 39.22 3.36
1310 1528 2.351726 GTCATTTGTATGCGGTGACTCC 59.648 50.000 6.01 0.00 36.98 3.85
1312 1530 2.093306 TTTGTATGCGGTGACTCCTG 57.907 50.000 0.00 0.00 0.00 3.86
1313 1531 0.973632 TTGTATGCGGTGACTCCTGT 59.026 50.000 0.00 0.00 0.00 4.00
1314 1532 0.973632 TGTATGCGGTGACTCCTGTT 59.026 50.000 0.00 0.00 0.00 3.16
1315 1533 1.067142 TGTATGCGGTGACTCCTGTTC 60.067 52.381 0.00 0.00 0.00 3.18
1316 1534 0.172578 TATGCGGTGACTCCTGTTCG 59.827 55.000 0.00 0.00 0.00 3.95
1318 1536 1.174078 TGCGGTGACTCCTGTTCGTA 61.174 55.000 0.00 0.00 0.00 3.43
1320 1538 0.879765 CGGTGACTCCTGTTCGTACT 59.120 55.000 0.00 0.00 0.00 2.73
1322 1540 1.135746 GGTGACTCCTGTTCGTACTCG 60.136 57.143 0.00 0.00 38.55 4.18
1323 1541 1.802960 GTGACTCCTGTTCGTACTCGA 59.197 52.381 0.00 0.00 44.66 4.04
1328 1546 0.098200 CCTGTTCGTACTCGATGCGA 59.902 55.000 4.51 4.51 45.65 5.10
1341 1561 5.289595 ACTCGATGCGATTTCTGCTAATAA 58.710 37.500 0.00 0.00 34.61 1.40
1345 1565 6.531594 TCGATGCGATTTCTGCTAATAATAGG 59.468 38.462 0.00 0.00 0.00 2.57
1347 1567 7.488150 CGATGCGATTTCTGCTAATAATAGGTA 59.512 37.037 0.00 0.00 0.00 3.08
1357 1577 7.453439 TCTGCTAATAATAGGTAGGCATACACA 59.547 37.037 11.12 0.00 33.21 3.72
1378 1599 7.210174 ACACATGCATAGATGTAAATACTCGT 58.790 34.615 0.00 0.00 34.69 4.18
1381 1602 7.926018 ACATGCATAGATGTAAATACTCGTTCA 59.074 33.333 0.00 0.00 34.69 3.18
1405 1626 0.249238 GATGCCGCAGTGACCTAGAG 60.249 60.000 0.00 0.00 0.00 2.43
1414 1635 2.102252 CAGTGACCTAGAGATGCCCTTC 59.898 54.545 0.00 0.00 0.00 3.46
1420 1641 2.035632 CTAGAGATGCCCTTCGGTTCT 58.964 52.381 0.00 0.00 0.00 3.01
1424 1645 1.134371 AGATGCCCTTCGGTTCTTAGC 60.134 52.381 0.00 0.00 0.00 3.09
1429 1650 2.158943 GCCCTTCGGTTCTTAGCTGTAT 60.159 50.000 0.00 0.00 0.00 2.29
1440 1661 6.969473 GGTTCTTAGCTGTATCAATTCTTTGC 59.031 38.462 0.00 0.00 32.61 3.68
1447 1668 5.865552 GCTGTATCAATTCTTTGCATGTTGT 59.134 36.000 0.00 0.00 32.61 3.32
1451 1672 8.355913 TGTATCAATTCTTTGCATGTTGTTGTA 58.644 29.630 0.00 0.00 32.61 2.41
1452 1673 9.357652 GTATCAATTCTTTGCATGTTGTTGTAT 57.642 29.630 0.00 0.00 32.61 2.29
1453 1674 7.640616 TCAATTCTTTGCATGTTGTTGTATG 57.359 32.000 0.00 0.00 32.61 2.39
1454 1675 7.208777 TCAATTCTTTGCATGTTGTTGTATGT 58.791 30.769 0.00 0.00 32.61 2.29
1455 1676 7.381948 TCAATTCTTTGCATGTTGTTGTATGTC 59.618 33.333 0.00 0.00 32.61 3.06
1456 1677 5.119931 TCTTTGCATGTTGTTGTATGTCC 57.880 39.130 0.00 0.00 0.00 4.02
1457 1678 4.582240 TCTTTGCATGTTGTTGTATGTCCA 59.418 37.500 0.00 0.00 0.00 4.02
1458 1679 5.243507 TCTTTGCATGTTGTTGTATGTCCAT 59.756 36.000 0.00 0.00 0.00 3.41
1459 1680 4.437772 TGCATGTTGTTGTATGTCCATG 57.562 40.909 0.00 0.00 34.32 3.66
1460 1681 3.825585 TGCATGTTGTTGTATGTCCATGT 59.174 39.130 0.00 0.00 33.85 3.21
1461 1682 4.082841 TGCATGTTGTTGTATGTCCATGTC 60.083 41.667 0.00 0.00 33.85 3.06
1462 1683 4.675146 GCATGTTGTTGTATGTCCATGTCC 60.675 45.833 0.00 0.00 33.85 4.02
1463 1684 3.417101 TGTTGTTGTATGTCCATGTCCC 58.583 45.455 0.00 0.00 0.00 4.46
1464 1685 3.181439 TGTTGTTGTATGTCCATGTCCCA 60.181 43.478 0.00 0.00 0.00 4.37
1465 1686 4.016444 GTTGTTGTATGTCCATGTCCCAT 58.984 43.478 0.00 0.00 0.00 4.00
1466 1687 3.619419 TGTTGTATGTCCATGTCCCATG 58.381 45.455 0.00 0.00 0.00 3.66
1467 1688 2.346766 TGTATGTCCATGTCCCATGC 57.653 50.000 0.00 0.00 0.00 4.06
1468 1689 1.133823 TGTATGTCCATGTCCCATGCC 60.134 52.381 0.00 0.00 0.00 4.40
1469 1690 1.133823 GTATGTCCATGTCCCATGCCA 60.134 52.381 0.00 0.00 0.00 4.92
1470 1691 0.559205 ATGTCCATGTCCCATGCCAT 59.441 50.000 0.00 1.40 0.00 4.40
1471 1692 0.335705 TGTCCATGTCCCATGCCATT 59.664 50.000 0.00 0.00 0.00 3.16
1472 1693 0.748450 GTCCATGTCCCATGCCATTG 59.252 55.000 0.00 0.00 0.00 2.82
1473 1694 0.335705 TCCATGTCCCATGCCATTGT 59.664 50.000 0.00 0.00 0.00 2.71
1474 1695 0.462375 CCATGTCCCATGCCATTGTG 59.538 55.000 0.00 0.00 0.00 3.33
1475 1696 1.187974 CATGTCCCATGCCATTGTGT 58.812 50.000 0.00 0.00 0.00 3.72
1476 1697 1.134936 CATGTCCCATGCCATTGTGTG 60.135 52.381 0.00 0.00 0.00 3.82
1477 1698 0.178967 TGTCCCATGCCATTGTGTGT 60.179 50.000 0.00 0.00 0.00 3.72
1478 1699 0.244450 GTCCCATGCCATTGTGTGTG 59.756 55.000 0.00 0.00 0.00 3.82
1479 1700 0.178967 TCCCATGCCATTGTGTGTGT 60.179 50.000 0.00 0.00 0.00 3.72
1480 1701 0.038067 CCCATGCCATTGTGTGTGTG 60.038 55.000 0.00 0.00 0.00 3.82
1481 1702 0.675083 CCATGCCATTGTGTGTGTGT 59.325 50.000 0.00 0.00 0.00 3.72
1482 1703 1.603425 CCATGCCATTGTGTGTGTGTG 60.603 52.381 0.00 0.00 0.00 3.82
1483 1704 1.067364 CATGCCATTGTGTGTGTGTGT 59.933 47.619 0.00 0.00 0.00 3.72
1484 1705 0.455005 TGCCATTGTGTGTGTGTGTG 59.545 50.000 0.00 0.00 0.00 3.82
1485 1706 0.455410 GCCATTGTGTGTGTGTGTGT 59.545 50.000 0.00 0.00 0.00 3.72
1486 1707 1.798446 GCCATTGTGTGTGTGTGTGTG 60.798 52.381 0.00 0.00 0.00 3.82
1487 1708 1.472082 CCATTGTGTGTGTGTGTGTGT 59.528 47.619 0.00 0.00 0.00 3.72
1488 1709 2.517935 CATTGTGTGTGTGTGTGTGTG 58.482 47.619 0.00 0.00 0.00 3.82
1489 1710 1.598882 TTGTGTGTGTGTGTGTGTGT 58.401 45.000 0.00 0.00 0.00 3.72
1490 1711 2.457366 TGTGTGTGTGTGTGTGTGTA 57.543 45.000 0.00 0.00 0.00 2.90
1491 1712 2.979240 TGTGTGTGTGTGTGTGTGTAT 58.021 42.857 0.00 0.00 0.00 2.29
1492 1713 4.124851 TGTGTGTGTGTGTGTGTGTATA 57.875 40.909 0.00 0.00 0.00 1.47
1518 1794 1.679680 CTAGGCCAGATTTGCATGGTG 59.320 52.381 5.01 0.00 38.91 4.17
1583 1860 7.429636 TTTAGGTGCTGTATTTTAGTGTGTC 57.570 36.000 0.00 0.00 0.00 3.67
1586 1863 4.143179 GGTGCTGTATTTTAGTGTGTCGAC 60.143 45.833 9.11 9.11 0.00 4.20
1615 1892 3.005261 TGTTCGGTGTAAATTGCTGCAAT 59.995 39.130 21.48 21.48 35.39 3.56
1643 1920 2.487762 TCAAATTTGACGCCCAGCTTAG 59.512 45.455 16.91 0.00 31.01 2.18
1644 1921 2.200373 AATTTGACGCCCAGCTTAGT 57.800 45.000 0.00 0.00 0.00 2.24
1645 1922 1.453155 ATTTGACGCCCAGCTTAGTG 58.547 50.000 0.00 0.00 0.00 2.74
1677 1990 5.186996 TGTTTCCTTCTGCTTGATTTGAC 57.813 39.130 0.00 0.00 0.00 3.18
1683 1996 0.813184 CTGCTTGATTTGACGCCCAT 59.187 50.000 0.00 0.00 0.00 4.00
1691 2004 2.325583 TTTGACGCCCATCTGGTATC 57.674 50.000 0.00 0.00 36.04 2.24
1713 2029 9.965824 GTATCTTTGAAATGTTTCCTTCTTGAA 57.034 29.630 3.26 0.00 36.36 2.69
1727 2047 6.879400 TCCTTCTTGAAGGAACTATTAGCTC 58.121 40.000 24.85 0.00 45.45 4.09
1884 2220 4.894784 TGTTGTCAGAATCAGAGGGTAAC 58.105 43.478 0.00 0.00 0.00 2.50
1946 2285 7.067615 TGTTGTGTTCATTTCTGGCTTAAGTTA 59.932 33.333 4.02 0.00 0.00 2.24
2044 2383 1.133915 GTTTGAGACAGGTGGGTTGGA 60.134 52.381 0.00 0.00 0.00 3.53
2090 2436 4.512484 TGAACTTGATTCATGCGTCCATA 58.488 39.130 0.00 0.00 42.62 2.74
2091 2437 4.332543 TGAACTTGATTCATGCGTCCATAC 59.667 41.667 0.00 0.00 42.62 2.39
2134 2480 3.932089 ACTTGTGTTTGTTGTGCCAATTC 59.068 39.130 0.00 0.00 0.00 2.17
2285 2653 5.898174 ACATGATACATGCCTTCAACATTG 58.102 37.500 0.00 0.00 0.00 2.82
2291 2659 4.813027 ACATGCCTTCAACATTGAATGAC 58.187 39.130 12.80 4.77 45.26 3.06
2304 2672 6.518493 ACATTGAATGACTGAATTGCTGTTT 58.482 32.000 12.80 0.00 0.00 2.83
2305 2673 6.422701 ACATTGAATGACTGAATTGCTGTTTG 59.577 34.615 12.80 0.00 0.00 2.93
2306 2674 5.518848 TGAATGACTGAATTGCTGTTTGT 57.481 34.783 0.00 0.00 0.00 2.83
2307 2675 5.904941 TGAATGACTGAATTGCTGTTTGTT 58.095 33.333 0.00 0.00 0.00 2.83
2308 2676 7.036996 TGAATGACTGAATTGCTGTTTGTTA 57.963 32.000 0.00 0.00 0.00 2.41
2309 2677 7.140705 TGAATGACTGAATTGCTGTTTGTTAG 58.859 34.615 0.00 0.00 0.00 2.34
2311 2679 6.691754 TGACTGAATTGCTGTTTGTTAGAA 57.308 33.333 0.00 0.00 0.00 2.10
2314 2682 5.594317 ACTGAATTGCTGTTTGTTAGAACCT 59.406 36.000 0.00 0.00 0.00 3.50
2315 2683 6.096846 ACTGAATTGCTGTTTGTTAGAACCTT 59.903 34.615 0.00 0.00 0.00 3.50
2316 2684 6.272318 TGAATTGCTGTTTGTTAGAACCTTG 58.728 36.000 0.00 0.00 0.00 3.61
2323 2748 6.072452 GCTGTTTGTTAGAACCTTGCTAGATT 60.072 38.462 0.00 0.00 0.00 2.40
2359 2787 1.810031 CGAGCCTGGAAGTTTCACACA 60.810 52.381 0.00 0.00 0.00 3.72
2360 2788 1.876156 GAGCCTGGAAGTTTCACACAG 59.124 52.381 0.00 0.00 0.00 3.66
2362 2790 2.024414 GCCTGGAAGTTTCACACAGTT 58.976 47.619 0.00 0.00 0.00 3.16
2365 2795 3.251004 CCTGGAAGTTTCACACAGTTAGC 59.749 47.826 0.00 0.00 0.00 3.09
2376 2806 4.456222 TCACACAGTTAGCAGAGTAGTCTC 59.544 45.833 0.00 0.00 40.70 3.36
2378 2808 4.216687 ACACAGTTAGCAGAGTAGTCTCAC 59.783 45.833 0.00 0.00 42.66 3.51
2382 2812 5.644206 CAGTTAGCAGAGTAGTCTCACACTA 59.356 44.000 0.00 0.00 42.66 2.74
2413 2843 4.314522 TCTGAATCAACCCCTGCATTTA 57.685 40.909 0.00 0.00 0.00 1.40
2427 2973 5.652014 CCCTGCATTTAATTCTACAACCTGA 59.348 40.000 0.00 0.00 0.00 3.86
2428 2974 6.322201 CCCTGCATTTAATTCTACAACCTGAT 59.678 38.462 0.00 0.00 0.00 2.90
2439 2985 6.268825 TCTACAACCTGATGTCAACTAGTC 57.731 41.667 0.00 0.00 34.75 2.59
2445 2991 5.542779 ACCTGATGTCAACTAGTCAAAGAC 58.457 41.667 0.00 3.46 0.00 3.01
2447 2993 5.406780 CCTGATGTCAACTAGTCAAAGACAC 59.593 44.000 17.25 13.19 41.43 3.67
2448 2994 5.912892 TGATGTCAACTAGTCAAAGACACA 58.087 37.500 17.25 14.75 41.43 3.72
2449 2995 6.345298 TGATGTCAACTAGTCAAAGACACAA 58.655 36.000 17.25 9.60 41.43 3.33
2452 2998 6.042777 TGTCAACTAGTCAAAGACACAAGAG 58.957 40.000 13.22 0.00 34.59 2.85
2453 2999 6.043411 GTCAACTAGTCAAAGACACAAGAGT 58.957 40.000 0.00 0.00 34.60 3.24
2454 3000 6.199342 GTCAACTAGTCAAAGACACAAGAGTC 59.801 42.308 0.00 0.00 38.81 3.36
2465 3022 4.747108 AGACACAAGAGTCTTTGATGTTCG 59.253 41.667 16.84 2.63 46.26 3.95
2621 3546 1.830477 AGGAGGTGAGCAGTCAGATTC 59.170 52.381 0.00 0.00 31.53 2.52
2623 3548 1.830477 GAGGTGAGCAGTCAGATTCCT 59.170 52.381 0.00 0.00 31.53 3.36
2635 3566 3.817647 GTCAGATTCCTCAACATATGGCC 59.182 47.826 7.80 0.00 0.00 5.36
2639 3570 4.665009 AGATTCCTCAACATATGGCCCTTA 59.335 41.667 7.80 0.00 0.00 2.69
2644 3575 6.916909 TCCTCAACATATGGCCCTTAATTTA 58.083 36.000 7.80 0.00 0.00 1.40
2645 3576 7.534852 TCCTCAACATATGGCCCTTAATTTAT 58.465 34.615 7.80 0.00 0.00 1.40
2665 3643 2.380064 TTCCAAATGCAACTCTGGGT 57.620 45.000 0.00 0.00 0.00 4.51
2686 3664 5.453198 GGGTTGATTCTGACCATTTTGTTGT 60.453 40.000 10.56 0.00 37.68 3.32
2687 3665 5.691754 GGTTGATTCTGACCATTTTGTTGTC 59.308 40.000 5.31 0.00 35.95 3.18
2759 3749 1.135139 CATGAGATCTTGACCGTCGGT 59.865 52.381 18.94 18.94 39.44 4.69
2858 6973 2.181021 CACTACGTCGAGGGTGGC 59.819 66.667 10.27 0.00 0.00 5.01
3093 7223 1.351080 ATGCCTCCTGCTATGTGCCT 61.351 55.000 0.00 0.00 42.00 4.75
3120 7250 2.390938 CGTTTCTCGTTGCTGTCTACA 58.609 47.619 0.00 0.00 34.52 2.74
3146 7282 7.784470 AGTATGTGGGGCTTTGTAATTTTTA 57.216 32.000 0.00 0.00 0.00 1.52
3151 7287 6.763610 TGTGGGGCTTTGTAATTTTTACTTTG 59.236 34.615 0.00 0.00 0.00 2.77
3158 7294 9.420966 GCTTTGTAATTTTTACTTTGAACTTGC 57.579 29.630 0.00 0.00 0.00 4.01
3188 8283 8.555166 TCTGCGTAAATTTTTCTGTTGTTTAG 57.445 30.769 0.00 0.00 0.00 1.85
3189 8284 8.399425 TCTGCGTAAATTTTTCTGTTGTTTAGA 58.601 29.630 0.00 0.00 0.00 2.10
3190 8285 8.555166 TGCGTAAATTTTTCTGTTGTTTAGAG 57.445 30.769 0.00 0.00 0.00 2.43
3196 8291 8.634475 AATTTTTCTGTTGTTTAGAGCAACTC 57.366 30.769 8.68 0.00 44.54 3.01
3197 8292 5.751243 TTTCTGTTGTTTAGAGCAACTCC 57.249 39.130 8.68 0.00 44.54 3.85
3198 8293 4.415881 TCTGTTGTTTAGAGCAACTCCA 57.584 40.909 8.68 0.00 44.54 3.86
3199 8294 4.776349 TCTGTTGTTTAGAGCAACTCCAA 58.224 39.130 8.68 0.00 44.54 3.53
3200 8295 5.189928 TCTGTTGTTTAGAGCAACTCCAAA 58.810 37.500 8.68 0.00 44.54 3.28
3201 8296 5.296780 TCTGTTGTTTAGAGCAACTCCAAAG 59.703 40.000 8.68 0.00 44.54 2.77
3202 8297 4.338118 TGTTGTTTAGAGCAACTCCAAAGG 59.662 41.667 8.68 0.00 44.54 3.11
3203 8298 3.486383 TGTTTAGAGCAACTCCAAAGGG 58.514 45.455 0.00 0.00 0.00 3.95
3204 8299 2.820197 GTTTAGAGCAACTCCAAAGGGG 59.180 50.000 0.00 0.00 38.37 4.79
3205 8300 1.742308 TAGAGCAACTCCAAAGGGGT 58.258 50.000 0.00 0.00 38.11 4.95
3206 8301 0.111253 AGAGCAACTCCAAAGGGGTG 59.889 55.000 0.00 0.00 38.11 4.61
3207 8302 0.110486 GAGCAACTCCAAAGGGGTGA 59.890 55.000 0.00 0.00 38.11 4.02
3208 8303 0.178990 AGCAACTCCAAAGGGGTGAC 60.179 55.000 0.00 0.00 38.11 3.67
3210 8305 1.318576 CAACTCCAAAGGGGTGACAC 58.681 55.000 0.00 0.00 38.11 3.67
3212 8307 0.474184 ACTCCAAAGGGGTGACACAG 59.526 55.000 8.08 0.00 38.11 3.66
3213 8308 0.890996 CTCCAAAGGGGTGACACAGC 60.891 60.000 8.08 0.00 38.11 4.40
3214 8309 2.260869 CCAAAGGGGTGACACAGCG 61.261 63.158 8.08 0.00 34.58 5.18
3215 8310 1.227823 CAAAGGGGTGACACAGCGA 60.228 57.895 8.08 0.00 34.58 4.93
3216 8311 1.227853 AAAGGGGTGACACAGCGAC 60.228 57.895 8.08 0.00 34.58 5.19
3220 8315 2.347490 GGTGACACAGCGACCCAT 59.653 61.111 8.08 0.00 0.00 4.00
3221 8316 1.302511 GGTGACACAGCGACCCATT 60.303 57.895 8.08 0.00 0.00 3.16
3222 8317 0.889186 GGTGACACAGCGACCCATTT 60.889 55.000 8.08 0.00 0.00 2.32
3223 8318 0.517316 GTGACACAGCGACCCATTTC 59.483 55.000 0.00 0.00 0.00 2.17
3226 8321 2.236146 TGACACAGCGACCCATTTCTAT 59.764 45.455 0.00 0.00 0.00 1.98
3227 8322 3.270877 GACACAGCGACCCATTTCTATT 58.729 45.455 0.00 0.00 0.00 1.73
3229 8324 4.839121 ACACAGCGACCCATTTCTATTTA 58.161 39.130 0.00 0.00 0.00 1.40
3230 8325 4.876107 ACACAGCGACCCATTTCTATTTAG 59.124 41.667 0.00 0.00 0.00 1.85
3231 8326 4.876107 CACAGCGACCCATTTCTATTTAGT 59.124 41.667 0.00 0.00 0.00 2.24
3232 8327 4.876107 ACAGCGACCCATTTCTATTTAGTG 59.124 41.667 0.00 0.00 0.00 2.74
3233 8328 4.876107 CAGCGACCCATTTCTATTTAGTGT 59.124 41.667 0.00 0.00 0.00 3.55
3234 8329 5.006746 CAGCGACCCATTTCTATTTAGTGTC 59.993 44.000 0.00 0.00 0.00 3.67
3235 8330 4.272748 GCGACCCATTTCTATTTAGTGTCC 59.727 45.833 0.00 0.00 0.00 4.02
3236 8331 5.424757 CGACCCATTTCTATTTAGTGTCCA 58.575 41.667 0.00 0.00 0.00 4.02
3238 8333 6.373216 CGACCCATTTCTATTTAGTGTCCAAA 59.627 38.462 0.00 0.00 0.00 3.28
3239 8334 7.067008 CGACCCATTTCTATTTAGTGTCCAAAT 59.933 37.037 0.00 0.00 0.00 2.32
3240 8335 8.664669 ACCCATTTCTATTTAGTGTCCAAATT 57.335 30.769 0.00 0.00 0.00 1.82
3241 8336 9.100197 ACCCATTTCTATTTAGTGTCCAAATTT 57.900 29.630 0.00 0.00 0.00 1.82
3242 8337 9.369904 CCCATTTCTATTTAGTGTCCAAATTTG 57.630 33.333 11.40 11.40 0.00 2.32
3245 8340 9.860898 ATTTCTATTTAGTGTCCAAATTTGAGC 57.139 29.630 19.86 11.59 0.00 4.26
3248 8343 4.846779 TTAGTGTCCAAATTTGAGCCAC 57.153 40.909 19.86 19.26 0.00 5.01
3249 8344 2.665165 AGTGTCCAAATTTGAGCCACA 58.335 42.857 19.86 12.60 0.00 4.17
3250 8345 3.233507 AGTGTCCAAATTTGAGCCACAT 58.766 40.909 19.86 9.31 0.00 3.21
3251 8346 3.642848 AGTGTCCAAATTTGAGCCACATT 59.357 39.130 19.86 9.89 0.00 2.71
3253 8348 5.304101 AGTGTCCAAATTTGAGCCACATTTA 59.696 36.000 19.86 0.00 0.00 1.40
3254 8349 5.634859 GTGTCCAAATTTGAGCCACATTTAG 59.365 40.000 19.86 0.00 0.00 1.85
3255 8350 5.170748 GTCCAAATTTGAGCCACATTTAGG 58.829 41.667 19.86 0.00 0.00 2.69
3257 8352 5.047377 TCCAAATTTGAGCCACATTTAGGTC 60.047 40.000 19.86 0.00 0.00 3.85
3264 9029 1.366111 CCACATTTAGGTCGTGGGCG 61.366 60.000 0.00 0.00 45.32 6.13
3267 9032 1.087771 CATTTAGGTCGTGGGCGGAC 61.088 60.000 0.00 0.00 38.89 4.79
3269 9034 2.438951 TTTAGGTCGTGGGCGGACAC 62.439 60.000 4.71 0.00 38.89 3.67
3274 9039 2.181521 TCGTGGGCGGACACAAAAC 61.182 57.895 5.80 0.00 41.38 2.43
3280 9045 1.442017 GCGGACACAAAACGGATGC 60.442 57.895 0.00 0.00 0.00 3.91
3282 9047 0.591170 CGGACACAAAACGGATGCTT 59.409 50.000 0.00 0.00 0.00 3.91
3284 9049 2.661594 GGACACAAAACGGATGCTTTC 58.338 47.619 0.00 0.00 0.00 2.62
3285 9050 2.293399 GGACACAAAACGGATGCTTTCT 59.707 45.455 0.00 0.00 0.00 2.52
3286 9051 3.555518 GACACAAAACGGATGCTTTCTC 58.444 45.455 0.00 0.00 0.00 2.87
3287 9052 3.214328 ACACAAAACGGATGCTTTCTCT 58.786 40.909 0.00 0.00 0.00 3.10
3289 9054 2.554032 ACAAAACGGATGCTTTCTCTGG 59.446 45.455 0.00 0.00 0.00 3.86
3290 9055 1.168714 AAACGGATGCTTTCTCTGGC 58.831 50.000 0.00 0.00 0.00 4.85
3292 9057 0.107945 ACGGATGCTTTCTCTGGCTC 60.108 55.000 0.00 0.00 0.00 4.70
3293 9058 0.813210 CGGATGCTTTCTCTGGCTCC 60.813 60.000 0.00 0.00 0.00 4.70
3294 9059 0.465278 GGATGCTTTCTCTGGCTCCC 60.465 60.000 0.00 0.00 0.00 4.30
3299 9064 1.948144 GCTTTCTCTGGCTCCCTTGTC 60.948 57.143 0.00 0.00 0.00 3.18
3300 9065 0.693049 TTTCTCTGGCTCCCTTGTCC 59.307 55.000 0.00 0.00 0.00 4.02
3301 9066 1.544825 TTCTCTGGCTCCCTTGTCCG 61.545 60.000 0.00 0.00 0.00 4.79
3302 9067 2.203788 TCTGGCTCCCTTGTCCGT 60.204 61.111 0.00 0.00 0.00 4.69
3303 9068 2.046892 CTGGCTCCCTTGTCCGTG 60.047 66.667 0.00 0.00 0.00 4.94
3305 9070 2.358737 GGCTCCCTTGTCCGTGTG 60.359 66.667 0.00 0.00 0.00 3.82
3306 9071 3.050275 GCTCCCTTGTCCGTGTGC 61.050 66.667 0.00 0.00 0.00 4.57
3307 9072 2.738521 CTCCCTTGTCCGTGTGCG 60.739 66.667 0.00 0.00 37.95 5.34
3308 9073 3.515316 CTCCCTTGTCCGTGTGCGT 62.515 63.158 0.00 0.00 36.15 5.24
3309 9074 3.041940 CCCTTGTCCGTGTGCGTC 61.042 66.667 0.00 0.00 36.15 5.19
3311 9076 2.029073 CTTGTCCGTGTGCGTCCT 59.971 61.111 0.00 0.00 36.15 3.85
3312 9077 2.279851 TTGTCCGTGTGCGTCCTG 60.280 61.111 0.00 0.00 36.15 3.86
3313 9078 3.800685 TTGTCCGTGTGCGTCCTGG 62.801 63.158 0.00 0.00 36.15 4.45
3339 9104 2.040544 CGCTTGTCACCCACCCATC 61.041 63.158 0.00 0.00 0.00 3.51
3340 9105 1.678970 GCTTGTCACCCACCCATCC 60.679 63.158 0.00 0.00 0.00 3.51
3341 9106 1.000896 CTTGTCACCCACCCATCCC 60.001 63.158 0.00 0.00 0.00 3.85
3343 9108 2.614013 GTCACCCACCCATCCCCT 60.614 66.667 0.00 0.00 0.00 4.79
3345 9110 2.286425 CACCCACCCATCCCCTCT 60.286 66.667 0.00 0.00 0.00 3.69
3346 9111 1.004230 CACCCACCCATCCCCTCTA 59.996 63.158 0.00 0.00 0.00 2.43
3347 9112 1.004361 ACCCACCCATCCCCTCTAC 59.996 63.158 0.00 0.00 0.00 2.59
3348 9113 1.318380 CCCACCCATCCCCTCTACT 59.682 63.158 0.00 0.00 0.00 2.57
3349 9114 0.327576 CCCACCCATCCCCTCTACTT 60.328 60.000 0.00 0.00 0.00 2.24
3350 9115 1.596496 CCACCCATCCCCTCTACTTT 58.404 55.000 0.00 0.00 0.00 2.66
3351 9116 1.923148 CCACCCATCCCCTCTACTTTT 59.077 52.381 0.00 0.00 0.00 2.27
3352 9117 3.120108 CCACCCATCCCCTCTACTTTTA 58.880 50.000 0.00 0.00 0.00 1.52
3353 9118 3.722101 CCACCCATCCCCTCTACTTTTAT 59.278 47.826 0.00 0.00 0.00 1.40
3354 9119 4.168088 CCACCCATCCCCTCTACTTTTATT 59.832 45.833 0.00 0.00 0.00 1.40
3356 9121 6.465894 CCACCCATCCCCTCTACTTTTATTAG 60.466 46.154 0.00 0.00 0.00 1.73
3357 9122 5.073280 ACCCATCCCCTCTACTTTTATTAGC 59.927 44.000 0.00 0.00 0.00 3.09
3358 9123 5.310857 CCCATCCCCTCTACTTTTATTAGCT 59.689 44.000 0.00 0.00 0.00 3.32
3359 9124 6.234177 CCATCCCCTCTACTTTTATTAGCTG 58.766 44.000 0.00 0.00 0.00 4.24
3360 9125 5.888982 TCCCCTCTACTTTTATTAGCTGG 57.111 43.478 0.00 0.00 0.00 4.85
3361 9126 4.102681 TCCCCTCTACTTTTATTAGCTGGC 59.897 45.833 0.00 0.00 0.00 4.85
3362 9127 4.390264 CCCTCTACTTTTATTAGCTGGCC 58.610 47.826 0.00 0.00 0.00 5.36
3364 9129 4.141482 CCTCTACTTTTATTAGCTGGCCCA 60.141 45.833 0.00 0.00 0.00 5.36
3367 9132 2.031870 CTTTTATTAGCTGGCCCACCC 58.968 52.381 0.00 0.00 33.59 4.61
3368 9133 0.260523 TTTATTAGCTGGCCCACCCC 59.739 55.000 0.00 0.00 33.59 4.95
3369 9134 0.921749 TTATTAGCTGGCCCACCCCA 60.922 55.000 0.00 0.00 33.59 4.96
3370 9135 1.641552 TATTAGCTGGCCCACCCCAC 61.642 60.000 0.00 0.00 33.59 4.61
3379 9144 4.838152 CCACCCCACCGCTCGATG 62.838 72.222 0.00 0.00 0.00 3.84
3389 9154 4.887987 GCTCGATGCGCCTCTGCT 62.888 66.667 4.18 0.00 35.36 4.24
3390 9155 2.657944 CTCGATGCGCCTCTGCTC 60.658 66.667 4.18 0.00 35.36 4.26
3391 9156 4.212913 TCGATGCGCCTCTGCTCC 62.213 66.667 4.18 0.00 35.36 4.70
3392 9157 4.218578 CGATGCGCCTCTGCTCCT 62.219 66.667 4.18 0.00 35.36 3.69
3393 9158 2.188994 GATGCGCCTCTGCTCCTT 59.811 61.111 4.18 0.00 35.36 3.36
3395 9160 2.866085 GATGCGCCTCTGCTCCTTGT 62.866 60.000 4.18 0.00 35.36 3.16
3396 9161 2.817396 GCGCCTCTGCTCCTTGTC 60.817 66.667 0.00 0.00 34.43 3.18
3397 9162 2.977178 CGCCTCTGCTCCTTGTCT 59.023 61.111 0.00 0.00 34.43 3.41
3398 9163 1.153667 CGCCTCTGCTCCTTGTCTC 60.154 63.158 0.00 0.00 34.43 3.36
3399 9164 1.153667 GCCTCTGCTCCTTGTCTCG 60.154 63.158 0.00 0.00 33.53 4.04
3401 9166 1.153667 CTCTGCTCCTTGTCTCGCC 60.154 63.158 0.00 0.00 0.00 5.54
3402 9167 2.507992 CTGCTCCTTGTCTCGCCG 60.508 66.667 0.00 0.00 0.00 6.46
3403 9168 4.742201 TGCTCCTTGTCTCGCCGC 62.742 66.667 0.00 0.00 0.00 6.53
3405 9170 2.202676 CTCCTTGTCTCGCCGCTC 60.203 66.667 0.00 0.00 0.00 5.03
3406 9171 2.989253 TCCTTGTCTCGCCGCTCA 60.989 61.111 0.00 0.00 0.00 4.26
3407 9172 2.811317 CCTTGTCTCGCCGCTCAC 60.811 66.667 0.00 0.00 0.00 3.51
3408 9173 2.811317 CTTGTCTCGCCGCTCACC 60.811 66.667 0.00 0.00 0.00 4.02
3409 9174 4.373116 TTGTCTCGCCGCTCACCC 62.373 66.667 0.00 0.00 0.00 4.61
3419 9184 3.426568 GCTCACCCTTGCTGCGTC 61.427 66.667 0.00 0.00 0.00 5.19
3420 9185 3.114616 CTCACCCTTGCTGCGTCG 61.115 66.667 0.00 0.00 0.00 5.12
3494 9259 3.797353 GGGCTGAATCTGGGCGGA 61.797 66.667 0.00 0.00 0.00 5.54
3495 9260 2.203126 GGCTGAATCTGGGCGGAG 60.203 66.667 0.00 0.00 0.00 4.63
3496 9261 2.203126 GCTGAATCTGGGCGGAGG 60.203 66.667 0.00 0.00 0.00 4.30
3497 9262 3.036429 GCTGAATCTGGGCGGAGGT 62.036 63.158 0.00 0.00 0.00 3.85
3498 9263 1.153289 CTGAATCTGGGCGGAGGTG 60.153 63.158 0.00 0.00 0.00 4.00
3499 9264 1.612146 TGAATCTGGGCGGAGGTGA 60.612 57.895 0.00 0.00 0.00 4.02
3500 9265 1.144936 GAATCTGGGCGGAGGTGAG 59.855 63.158 0.00 0.00 0.00 3.51
3501 9266 2.932130 GAATCTGGGCGGAGGTGAGC 62.932 65.000 0.00 0.00 0.00 4.26
3514 9279 3.371063 TGAGCGTCACGTCCCTCC 61.371 66.667 0.00 0.00 0.00 4.30
3515 9280 3.063084 GAGCGTCACGTCCCTCCT 61.063 66.667 0.00 0.00 0.00 3.69
3516 9281 3.053849 GAGCGTCACGTCCCTCCTC 62.054 68.421 0.00 0.00 0.00 3.71
3517 9282 4.131088 GCGTCACGTCCCTCCTCC 62.131 72.222 0.00 0.00 0.00 4.30
3518 9283 2.675423 CGTCACGTCCCTCCTCCA 60.675 66.667 0.00 0.00 0.00 3.86
3520 9285 1.606889 GTCACGTCCCTCCTCCACT 60.607 63.158 0.00 0.00 0.00 4.00
3521 9286 1.606601 TCACGTCCCTCCTCCACTG 60.607 63.158 0.00 0.00 0.00 3.66
3522 9287 2.997897 ACGTCCCTCCTCCACTGC 60.998 66.667 0.00 0.00 0.00 4.40
3524 9289 2.716017 CGTCCCTCCTCCACTGCTC 61.716 68.421 0.00 0.00 0.00 4.26
3525 9290 2.363018 TCCCTCCTCCACTGCTCG 60.363 66.667 0.00 0.00 0.00 5.03
3526 9291 4.154347 CCCTCCTCCACTGCTCGC 62.154 72.222 0.00 0.00 0.00 5.03
3527 9292 4.154347 CCTCCTCCACTGCTCGCC 62.154 72.222 0.00 0.00 0.00 5.54
3544 9309 4.899239 CGCTCCCCGATCTGGCAC 62.899 72.222 0.00 0.00 40.02 5.01
3545 9310 4.899239 GCTCCCCGATCTGGCACG 62.899 72.222 0.00 0.00 35.87 5.34
3546 9311 3.147595 CTCCCCGATCTGGCACGA 61.148 66.667 0.00 0.00 35.87 4.35
3549 9314 4.227134 CCCGATCTGGCACGAGGG 62.227 72.222 0.00 0.00 35.87 4.30
3553 9318 3.432051 GATCTGGCACGAGGGTCCG 62.432 68.421 0.00 0.00 0.00 4.79
3559 9324 4.742201 CACGAGGGTCCGGTGCTG 62.742 72.222 0.00 0.00 0.00 4.41
3560 9325 4.988716 ACGAGGGTCCGGTGCTGA 62.989 66.667 0.00 0.00 0.00 4.26
3561 9326 4.135153 CGAGGGTCCGGTGCTGAG 62.135 72.222 0.00 0.00 0.00 3.35
3562 9327 3.775654 GAGGGTCCGGTGCTGAGG 61.776 72.222 0.00 0.00 0.00 3.86
3564 9329 3.319198 GGGTCCGGTGCTGAGGAA 61.319 66.667 0.00 0.00 38.41 3.36
3565 9330 2.266055 GGTCCGGTGCTGAGGAAG 59.734 66.667 0.00 0.00 38.41 3.46
3573 9338 2.581953 GCTGAGGAAGCGAGCGAG 60.582 66.667 0.00 0.00 43.45 5.03
3574 9339 2.103934 CTGAGGAAGCGAGCGAGG 59.896 66.667 0.00 0.00 0.00 4.63
3575 9340 4.135153 TGAGGAAGCGAGCGAGGC 62.135 66.667 0.00 0.00 0.00 4.70
3594 9359 4.724602 GCTCCGCGACTGCACAGA 62.725 66.667 8.23 0.00 42.97 3.41
3595 9360 2.505777 CTCCGCGACTGCACAGAG 60.506 66.667 8.23 0.00 42.97 3.35
3596 9361 3.274455 CTCCGCGACTGCACAGAGT 62.274 63.158 8.23 0.00 42.97 3.24
3597 9362 3.108289 CCGCGACTGCACAGAGTG 61.108 66.667 8.23 4.80 42.97 3.51
3598 9363 3.108289 CGCGACTGCACAGAGTGG 61.108 66.667 0.00 0.00 42.97 4.00
3599 9364 2.340078 GCGACTGCACAGAGTGGA 59.660 61.111 4.31 0.00 42.15 4.02
3600 9365 2.024319 GCGACTGCACAGAGTGGAC 61.024 63.158 4.31 0.00 42.15 4.02
3601 9366 1.730902 CGACTGCACAGAGTGGACG 60.731 63.158 4.31 0.00 33.64 4.79
3602 9367 2.024319 GACTGCACAGAGTGGACGC 61.024 63.158 4.31 0.00 33.64 5.19
3603 9368 2.740055 CTGCACAGAGTGGACGCC 60.740 66.667 0.00 0.00 33.64 5.68
3604 9369 4.662961 TGCACAGAGTGGACGCCG 62.663 66.667 0.00 0.00 33.64 6.46
3622 9387 4.849329 GCCTCCCACGCGTCGTAG 62.849 72.222 9.86 6.52 38.32 3.51
3624 9389 3.812019 CTCCCACGCGTCGTAGCT 61.812 66.667 9.86 0.00 38.32 3.32
3625 9390 3.736482 CTCCCACGCGTCGTAGCTC 62.736 68.421 9.86 0.00 38.32 4.09
3644 9409 4.570663 CGTGCCCGACCCGATCTC 62.571 72.222 0.00 0.00 35.63 2.75
3645 9410 4.570663 GTGCCCGACCCGATCTCG 62.571 72.222 0.00 0.00 39.44 4.04
3647 9412 4.267503 GCCCGACCCGATCTCGTC 62.268 72.222 2.65 1.39 37.74 4.20
3648 9413 3.593794 CCCGACCCGATCTCGTCC 61.594 72.222 2.65 0.00 37.74 4.79
3649 9414 3.593794 CCGACCCGATCTCGTCCC 61.594 72.222 2.65 0.00 37.74 4.46
3650 9415 3.593794 CGACCCGATCTCGTCCCC 61.594 72.222 0.00 0.00 37.74 4.81
3651 9416 2.123812 GACCCGATCTCGTCCCCT 60.124 66.667 0.00 0.00 37.74 4.79
3652 9417 2.442272 ACCCGATCTCGTCCCCTG 60.442 66.667 0.00 0.00 37.74 4.45
3653 9418 3.917760 CCCGATCTCGTCCCCTGC 61.918 72.222 0.00 0.00 37.74 4.85
3654 9419 3.147595 CCGATCTCGTCCCCTGCA 61.148 66.667 0.00 0.00 37.74 4.41
3655 9420 2.105128 CGATCTCGTCCCCTGCAC 59.895 66.667 0.00 0.00 34.11 4.57
3656 9421 2.501610 GATCTCGTCCCCTGCACC 59.498 66.667 0.00 0.00 0.00 5.01
3678 9443 4.410400 CTGGTCGCCCCCACCTTC 62.410 72.222 0.00 0.00 34.66 3.46
3680 9445 4.717313 GGTCGCCCCCACCTTCAC 62.717 72.222 0.00 0.00 0.00 3.18
3681 9446 4.717313 GTCGCCCCCACCTTCACC 62.717 72.222 0.00 0.00 0.00 4.02
3684 9449 4.717313 GCCCCCACCTTCACCGTC 62.717 72.222 0.00 0.00 0.00 4.79
3685 9450 4.029809 CCCCCACCTTCACCGTCC 62.030 72.222 0.00 0.00 0.00 4.79
3686 9451 4.029809 CCCCACCTTCACCGTCCC 62.030 72.222 0.00 0.00 0.00 4.46
3687 9452 4.029809 CCCACCTTCACCGTCCCC 62.030 72.222 0.00 0.00 0.00 4.81
3717 9482 4.838486 CTCTCCTGGTCGCGCGTC 62.838 72.222 30.98 24.71 0.00 5.19
3719 9484 4.838486 CTCCTGGTCGCGCGTCTC 62.838 72.222 30.98 20.01 0.00 3.36
3822 9587 4.430765 CCGTGGGGTTCGACCTCG 62.431 72.222 7.75 7.75 43.44 4.63
3824 9589 4.754667 GTGGGGTTCGACCTCGCC 62.755 72.222 6.28 7.99 43.44 5.54
3827 9592 3.782443 GGGTTCGACCTCGCCCAT 61.782 66.667 5.73 0.00 40.13 4.00
3828 9593 2.202892 GGTTCGACCTCGCCCATC 60.203 66.667 0.00 0.00 39.60 3.51
3829 9594 2.577059 GTTCGACCTCGCCCATCA 59.423 61.111 0.00 0.00 39.60 3.07
3830 9595 1.519455 GTTCGACCTCGCCCATCAG 60.519 63.158 0.00 0.00 39.60 2.90
3831 9596 3.371097 TTCGACCTCGCCCATCAGC 62.371 63.158 0.00 0.00 39.60 4.26
3832 9597 4.147449 CGACCTCGCCCATCAGCA 62.147 66.667 0.00 0.00 0.00 4.41
3833 9598 2.512515 GACCTCGCCCATCAGCAC 60.513 66.667 0.00 0.00 0.00 4.40
3834 9599 4.101448 ACCTCGCCCATCAGCACC 62.101 66.667 0.00 0.00 0.00 5.01
3835 9600 3.790437 CCTCGCCCATCAGCACCT 61.790 66.667 0.00 0.00 0.00 4.00
3836 9601 2.202987 CTCGCCCATCAGCACCTC 60.203 66.667 0.00 0.00 0.00 3.85
3837 9602 3.746949 CTCGCCCATCAGCACCTCC 62.747 68.421 0.00 0.00 0.00 4.30
3838 9603 4.864334 CGCCCATCAGCACCTCCC 62.864 72.222 0.00 0.00 0.00 4.30
3840 9605 3.813724 CCCATCAGCACCTCCCCC 61.814 72.222 0.00 0.00 0.00 5.40
3841 9606 2.693864 CCATCAGCACCTCCCCCT 60.694 66.667 0.00 0.00 0.00 4.79
3877 9642 4.496336 CCCTGCCCTGCCTGCTAC 62.496 72.222 0.00 0.00 0.00 3.58
3878 9643 4.845580 CCTGCCCTGCCTGCTACG 62.846 72.222 0.00 0.00 0.00 3.51
3879 9644 4.087892 CTGCCCTGCCTGCTACGT 62.088 66.667 0.00 0.00 0.00 3.57
3880 9645 4.393155 TGCCCTGCCTGCTACGTG 62.393 66.667 0.00 0.00 0.00 4.49
3881 9646 4.394712 GCCCTGCCTGCTACGTGT 62.395 66.667 0.00 0.00 0.00 4.49
3882 9647 2.347490 CCCTGCCTGCTACGTGTT 59.653 61.111 0.00 0.00 0.00 3.32
3883 9648 1.741770 CCCTGCCTGCTACGTGTTC 60.742 63.158 0.00 0.00 0.00 3.18
3884 9649 2.094659 CCTGCCTGCTACGTGTTCG 61.095 63.158 0.00 0.00 43.34 3.95
3885 9650 1.080772 CTGCCTGCTACGTGTTCGA 60.081 57.895 0.00 0.00 40.62 3.71
3886 9651 1.073216 CTGCCTGCTACGTGTTCGAG 61.073 60.000 0.00 0.00 40.62 4.04
3887 9652 1.211969 GCCTGCTACGTGTTCGAGA 59.788 57.895 0.00 0.00 40.62 4.04
3888 9653 0.388134 GCCTGCTACGTGTTCGAGAA 60.388 55.000 0.00 0.00 40.62 2.87
3889 9654 1.933500 GCCTGCTACGTGTTCGAGAAA 60.934 52.381 0.00 0.00 40.62 2.52
3890 9655 2.400399 CCTGCTACGTGTTCGAGAAAA 58.600 47.619 0.00 0.00 40.62 2.29
3891 9656 2.993899 CCTGCTACGTGTTCGAGAAAAT 59.006 45.455 0.00 0.00 40.62 1.82
3892 9657 3.181530 CCTGCTACGTGTTCGAGAAAATG 60.182 47.826 0.00 0.00 40.62 2.32
3893 9658 3.386486 TGCTACGTGTTCGAGAAAATGT 58.614 40.909 0.00 6.18 40.62 2.71
3894 9659 3.427528 TGCTACGTGTTCGAGAAAATGTC 59.572 43.478 0.00 0.00 40.62 3.06
3895 9660 3.427528 GCTACGTGTTCGAGAAAATGTCA 59.572 43.478 0.00 0.00 40.62 3.58
3896 9661 4.433022 GCTACGTGTTCGAGAAAATGTCAG 60.433 45.833 0.00 3.47 40.62 3.51
3897 9662 2.800544 ACGTGTTCGAGAAAATGTCAGG 59.199 45.455 0.00 0.00 40.62 3.86
3898 9663 2.157668 CGTGTTCGAGAAAATGTCAGGG 59.842 50.000 0.00 0.00 39.71 4.45
3899 9664 2.095718 GTGTTCGAGAAAATGTCAGGGC 60.096 50.000 0.00 0.00 0.00 5.19
3900 9665 1.128692 GTTCGAGAAAATGTCAGGGCG 59.871 52.381 0.00 0.00 0.00 6.13
3901 9666 0.391130 TCGAGAAAATGTCAGGGCGG 60.391 55.000 0.00 0.00 0.00 6.13
3902 9667 0.391130 CGAGAAAATGTCAGGGCGGA 60.391 55.000 0.00 0.00 0.00 5.54
3903 9668 1.087501 GAGAAAATGTCAGGGCGGAC 58.912 55.000 1.42 1.42 38.29 4.79
3908 9673 3.156714 TGTCAGGGCGGACATGTT 58.843 55.556 0.00 0.00 42.56 2.71
3909 9674 1.302431 TGTCAGGGCGGACATGTTG 60.302 57.895 0.00 0.00 42.56 3.33
3910 9675 1.003839 GTCAGGGCGGACATGTTGA 60.004 57.895 0.00 0.00 37.73 3.18
3911 9676 0.605319 GTCAGGGCGGACATGTTGAA 60.605 55.000 0.00 0.00 37.73 2.69
3912 9677 0.109532 TCAGGGCGGACATGTTGAAA 59.890 50.000 0.00 0.00 31.56 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.599558 GTTGCTTGGCTGCAGAATCA 59.400 50.000 20.43 9.36 44.27 2.57
41 42 3.142951 CCGGTTGGTGTTCAGTGAATTA 58.857 45.455 9.18 0.00 0.00 1.40
44 47 1.098712 GCCGGTTGGTGTTCAGTGAA 61.099 55.000 1.90 0.08 37.67 3.18
168 171 0.613260 TGCAGATACCGTCCAGCTTT 59.387 50.000 0.00 0.00 31.66 3.51
199 202 0.386478 CTTCTTGTGCTTGAAGGCGC 60.386 55.000 0.00 0.00 42.34 6.53
231 235 3.134574 AGACCATTTGTTTCGCCAGTA 57.865 42.857 0.00 0.00 0.00 2.74
237 241 6.529829 TCAAAAGACAAAGACCATTTGTTTCG 59.470 34.615 7.36 0.00 42.11 3.46
248 252 3.243201 CCTGGCTGTCAAAAGACAAAGAC 60.243 47.826 0.00 0.00 33.83 3.01
250 254 2.035066 CCCTGGCTGTCAAAAGACAAAG 59.965 50.000 0.00 0.00 33.83 2.77
257 261 0.843309 TCTCACCCTGGCTGTCAAAA 59.157 50.000 0.00 0.00 0.00 2.44
258 262 0.843309 TTCTCACCCTGGCTGTCAAA 59.157 50.000 0.00 0.00 0.00 2.69
259 263 1.067295 ATTCTCACCCTGGCTGTCAA 58.933 50.000 0.00 0.00 0.00 3.18
260 264 0.325933 CATTCTCACCCTGGCTGTCA 59.674 55.000 0.00 0.00 0.00 3.58
261 265 0.615331 TCATTCTCACCCTGGCTGTC 59.385 55.000 0.00 0.00 0.00 3.51
262 266 0.617413 CTCATTCTCACCCTGGCTGT 59.383 55.000 0.00 0.00 0.00 4.40
263 267 0.907486 TCTCATTCTCACCCTGGCTG 59.093 55.000 0.00 0.00 0.00 4.85
264 268 1.767681 GATCTCATTCTCACCCTGGCT 59.232 52.381 0.00 0.00 0.00 4.75
265 269 1.539929 CGATCTCATTCTCACCCTGGC 60.540 57.143 0.00 0.00 0.00 4.85
266 270 1.759445 ACGATCTCATTCTCACCCTGG 59.241 52.381 0.00 0.00 0.00 4.45
267 271 3.549019 CGTACGATCTCATTCTCACCCTG 60.549 52.174 10.44 0.00 0.00 4.45
474 478 2.338500 GCCTCTTTCTGGTACTGTTCG 58.662 52.381 0.00 0.00 0.00 3.95
510 514 4.154347 CAGGTGCGCCCCTCTCTC 62.154 72.222 9.08 0.00 34.57 3.20
671 701 1.227147 CGTACCGTGTAGGCCCATG 60.227 63.158 0.00 0.00 46.52 3.66
685 749 3.131478 GGCCCACACCATGCGTAC 61.131 66.667 0.00 0.00 0.00 3.67
785 849 2.689771 GGGGGCTAGGGTTTCGGA 60.690 66.667 0.00 0.00 0.00 4.55
936 1016 3.464494 GGGAGCAAATGCCCTGGC 61.464 66.667 0.00 0.00 43.38 4.85
961 1041 3.083349 CCAGGGTCAGATCCGGCA 61.083 66.667 0.00 0.00 0.00 5.69
980 1060 3.334751 GCGGCCGCAAAACCAAAC 61.335 61.111 43.55 11.09 41.49 2.93
1242 1374 5.332656 GCATCCTCGAACGCTTAAATCTAAG 60.333 44.000 0.00 0.00 38.06 2.18
1251 1383 0.108992 TAACGCATCCTCGAACGCTT 60.109 50.000 0.00 0.00 0.00 4.68
1257 1389 0.457166 CCAACGTAACGCATCCTCGA 60.457 55.000 0.00 0.00 0.00 4.04
1268 1402 2.028476 CCCAGTCACAGATCCAACGTAA 60.028 50.000 0.00 0.00 0.00 3.18
1270 1404 0.321671 CCCAGTCACAGATCCAACGT 59.678 55.000 0.00 0.00 0.00 3.99
1271 1405 0.321671 ACCCAGTCACAGATCCAACG 59.678 55.000 0.00 0.00 0.00 4.10
1274 1408 1.956869 ATGACCCAGTCACAGATCCA 58.043 50.000 0.00 0.00 45.65 3.41
1283 1417 1.670811 CCGCATACAAATGACCCAGTC 59.329 52.381 0.00 0.00 34.84 3.51
1289 1423 2.351726 GGAGTCACCGCATACAAATGAC 59.648 50.000 0.00 0.00 39.99 3.06
1292 1426 2.027192 ACAGGAGTCACCGCATACAAAT 60.027 45.455 0.00 0.00 44.74 2.32
1315 1533 1.188138 GCAGAAATCGCATCGAGTACG 59.812 52.381 0.00 0.00 39.91 3.67
1316 1534 2.464865 AGCAGAAATCGCATCGAGTAC 58.535 47.619 0.00 0.00 39.91 2.73
1318 1536 2.871182 TAGCAGAAATCGCATCGAGT 57.129 45.000 0.00 0.00 39.91 4.18
1320 1538 6.531594 CCTATTATTAGCAGAAATCGCATCGA 59.468 38.462 0.00 0.00 41.13 3.59
1322 1540 7.602517 ACCTATTATTAGCAGAAATCGCATC 57.397 36.000 0.00 0.00 0.00 3.91
1323 1541 7.766278 CCTACCTATTATTAGCAGAAATCGCAT 59.234 37.037 0.00 0.00 0.00 4.73
1328 1546 9.892130 GTATGCCTACCTATTATTAGCAGAAAT 57.108 33.333 0.00 0.00 0.00 2.17
1357 1577 7.114953 CGTGAACGAGTATTTACATCTATGCAT 59.885 37.037 3.79 3.79 43.02 3.96
1371 1592 1.470979 GGCATCACCGTGAACGAGTAT 60.471 52.381 5.07 0.00 43.02 2.12
1374 1595 3.474806 GGCATCACCGTGAACGAG 58.525 61.111 5.07 0.00 43.02 4.18
1414 1635 6.910536 AAGAATTGATACAGCTAAGAACCG 57.089 37.500 0.00 0.00 0.00 4.44
1420 1641 7.395190 ACATGCAAAGAATTGATACAGCTAA 57.605 32.000 0.00 0.00 38.94 3.09
1424 1645 7.383029 ACAACAACATGCAAAGAATTGATACAG 59.617 33.333 9.53 0.00 38.94 2.74
1429 1650 7.208777 ACATACAACAACATGCAAAGAATTGA 58.791 30.769 9.53 0.00 38.94 2.57
1440 1661 4.142403 GGGACATGGACATACAACAACATG 60.142 45.833 0.00 0.00 40.94 3.21
1447 1668 7.873469 AATGGCATGGGACATGGACATACAA 62.873 44.000 0.00 0.00 43.83 2.41
1451 1672 1.062734 AATGGCATGGGACATGGACAT 60.063 47.619 0.00 3.49 43.83 3.06
1452 1673 0.335705 AATGGCATGGGACATGGACA 59.664 50.000 0.00 1.40 43.83 4.02
1453 1674 0.748450 CAATGGCATGGGACATGGAC 59.252 55.000 0.00 0.00 43.83 4.02
1454 1675 0.335705 ACAATGGCATGGGACATGGA 59.664 50.000 6.84 0.00 43.83 3.41
1455 1676 0.462375 CACAATGGCATGGGACATGG 59.538 55.000 6.84 0.00 43.83 3.66
1456 1677 1.134936 CACACAATGGCATGGGACATG 60.135 52.381 6.84 4.92 43.83 3.21
1459 1680 0.244450 CACACACAATGGCATGGGAC 59.756 55.000 6.84 0.00 0.00 4.46
1460 1681 0.178967 ACACACACAATGGCATGGGA 60.179 50.000 6.84 0.00 0.00 4.37
1461 1682 0.038067 CACACACACAATGGCATGGG 60.038 55.000 6.84 2.25 0.00 4.00
1462 1683 0.675083 ACACACACACAATGGCATGG 59.325 50.000 0.00 0.00 0.00 3.66
1463 1684 1.067364 ACACACACACACAATGGCATG 59.933 47.619 0.00 0.00 0.00 4.06
1464 1685 1.067364 CACACACACACACAATGGCAT 59.933 47.619 0.00 0.00 0.00 4.40
1465 1686 0.455005 CACACACACACACAATGGCA 59.545 50.000 0.00 0.00 0.00 4.92
1466 1687 0.455410 ACACACACACACACAATGGC 59.545 50.000 0.00 0.00 0.00 4.40
1467 1688 1.472082 ACACACACACACACACAATGG 59.528 47.619 0.00 0.00 0.00 3.16
1468 1689 2.095314 ACACACACACACACACACAATG 60.095 45.455 0.00 0.00 0.00 2.82
1469 1690 2.158559 ACACACACACACACACACAAT 58.841 42.857 0.00 0.00 0.00 2.71
1470 1691 1.598882 ACACACACACACACACACAA 58.401 45.000 0.00 0.00 0.00 3.33
1471 1692 2.457366 TACACACACACACACACACA 57.543 45.000 0.00 0.00 0.00 3.72
1472 1693 5.235401 TCATTATACACACACACACACACAC 59.765 40.000 0.00 0.00 0.00 3.82
1473 1694 5.235401 GTCATTATACACACACACACACACA 59.765 40.000 0.00 0.00 0.00 3.72
1474 1695 5.333798 GGTCATTATACACACACACACACAC 60.334 44.000 0.00 0.00 0.00 3.82
1475 1696 4.752604 GGTCATTATACACACACACACACA 59.247 41.667 0.00 0.00 0.00 3.72
1476 1697 4.994852 AGGTCATTATACACACACACACAC 59.005 41.667 0.00 0.00 0.00 3.82
1477 1698 5.222079 AGGTCATTATACACACACACACA 57.778 39.130 0.00 0.00 0.00 3.72
1478 1699 5.810587 CCTAGGTCATTATACACACACACAC 59.189 44.000 0.00 0.00 0.00 3.82
1479 1700 5.625886 GCCTAGGTCATTATACACACACACA 60.626 44.000 11.31 0.00 0.00 3.72
1480 1701 4.809426 GCCTAGGTCATTATACACACACAC 59.191 45.833 11.31 0.00 0.00 3.82
1481 1702 4.141801 GGCCTAGGTCATTATACACACACA 60.142 45.833 9.01 0.00 0.00 3.72
1482 1703 4.141801 TGGCCTAGGTCATTATACACACAC 60.142 45.833 13.40 0.00 0.00 3.82
1483 1704 4.034410 TGGCCTAGGTCATTATACACACA 58.966 43.478 13.40 0.00 0.00 3.72
1484 1705 4.344102 TCTGGCCTAGGTCATTATACACAC 59.656 45.833 18.38 0.00 0.00 3.82
1485 1706 4.552674 TCTGGCCTAGGTCATTATACACA 58.447 43.478 18.38 0.00 0.00 3.72
1486 1707 5.746990 ATCTGGCCTAGGTCATTATACAC 57.253 43.478 18.38 0.00 0.00 2.90
1487 1708 6.533730 CAAATCTGGCCTAGGTCATTATACA 58.466 40.000 18.38 0.00 0.00 2.29
1488 1709 5.412904 GCAAATCTGGCCTAGGTCATTATAC 59.587 44.000 18.38 1.49 0.00 1.47
1489 1710 5.073008 TGCAAATCTGGCCTAGGTCATTATA 59.927 40.000 18.38 3.33 0.00 0.98
1490 1711 4.141181 TGCAAATCTGGCCTAGGTCATTAT 60.141 41.667 18.38 10.99 0.00 1.28
1491 1712 3.201930 TGCAAATCTGGCCTAGGTCATTA 59.798 43.478 18.38 8.88 0.00 1.90
1492 1713 2.025037 TGCAAATCTGGCCTAGGTCATT 60.025 45.455 18.38 6.45 0.00 2.57
1518 1794 5.007921 AGGTTTGATTTCATTTTGCTGCAAC 59.992 36.000 15.72 1.39 0.00 4.17
1583 1860 7.388712 CAATTTACACCGAACAGTTATAGTCG 58.611 38.462 0.00 0.00 0.00 4.18
1586 1863 7.180079 CAGCAATTTACACCGAACAGTTATAG 58.820 38.462 0.00 0.00 0.00 1.31
1615 1892 3.131223 TGGGCGTCAAATTTGAACAAAGA 59.869 39.130 22.07 3.10 39.21 2.52
1643 1920 5.403466 GCAGAAGGAAACATTTCAATGACAC 59.597 40.000 6.53 0.00 39.67 3.67
1644 1921 5.302568 AGCAGAAGGAAACATTTCAATGACA 59.697 36.000 6.53 0.00 39.67 3.58
1645 1922 5.776744 AGCAGAAGGAAACATTTCAATGAC 58.223 37.500 6.53 0.00 39.67 3.06
1677 1990 2.620251 TCAAAGATACCAGATGGGCG 57.380 50.000 3.48 0.00 42.05 6.13
1683 1996 7.944554 AGAAGGAAACATTTCAAAGATACCAGA 59.055 33.333 6.68 0.00 38.92 3.86
1713 2029 7.610580 ATTAGAAGCAGAGCTAATAGTTCCT 57.389 36.000 0.38 0.00 38.25 3.36
1719 2035 9.915629 GTTAAGCTATTAGAAGCAGAGCTAATA 57.084 33.333 0.00 0.00 45.30 0.98
1727 2047 6.823689 TCCCAAAGTTAAGCTATTAGAAGCAG 59.176 38.462 0.00 0.00 45.30 4.24
1884 2220 1.149174 AGTGGCAAGGTGGTGTGAG 59.851 57.895 0.00 0.00 0.00 3.51
1946 2285 6.369615 GCCAGACATTTGACAAAATTAGCATT 59.630 34.615 4.41 0.00 33.59 3.56
2044 2383 5.146010 ACTTGACACAACCAACAAATTGT 57.854 34.783 0.00 0.00 39.63 2.71
2134 2480 7.485810 TCCATTGAATATCTGCACAATCAAAG 58.514 34.615 0.00 0.00 31.85 2.77
2285 2653 7.362662 TCTAACAAACAGCAATTCAGTCATTC 58.637 34.615 0.00 0.00 0.00 2.67
2291 2659 6.076981 AGGTTCTAACAAACAGCAATTCAG 57.923 37.500 0.00 0.00 0.00 3.02
2304 2672 7.817418 AAACAAATCTAGCAAGGTTCTAACA 57.183 32.000 0.00 0.00 0.00 2.41
2331 2757 0.465705 CTTCCAGGCTCGCAATAGGA 59.534 55.000 0.00 0.00 0.00 2.94
2332 2758 0.179000 ACTTCCAGGCTCGCAATAGG 59.821 55.000 0.00 0.00 0.00 2.57
2338 2764 0.884704 TGTGAAACTTCCAGGCTCGC 60.885 55.000 0.00 0.00 38.04 5.03
2359 2787 4.658063 AGTGTGAGACTACTCTGCTAACT 58.342 43.478 0.00 0.00 42.99 2.24
2360 2788 6.497785 TTAGTGTGAGACTACTCTGCTAAC 57.502 41.667 0.00 0.00 42.99 2.34
2362 2790 8.047911 AGTATTTAGTGTGAGACTACTCTGCTA 58.952 37.037 0.00 0.00 42.99 3.49
2365 2795 8.500753 AGAGTATTTAGTGTGAGACTACTCTG 57.499 38.462 10.88 0.00 41.98 3.35
2378 2808 8.669243 GGGTTGATTCAGAAAGAGTATTTAGTG 58.331 37.037 0.00 0.00 0.00 2.74
2382 2812 6.660949 CAGGGGTTGATTCAGAAAGAGTATTT 59.339 38.462 0.00 0.00 0.00 1.40
2413 2843 7.680730 ACTAGTTGACATCAGGTTGTAGAATT 58.319 34.615 0.00 0.00 0.00 2.17
2427 2973 6.582636 TCTTGTGTCTTTGACTAGTTGACAT 58.417 36.000 18.08 0.00 39.39 3.06
2428 2974 5.972935 TCTTGTGTCTTTGACTAGTTGACA 58.027 37.500 13.90 13.90 35.62 3.58
2445 2991 3.809832 ACCGAACATCAAAGACTCTTGTG 59.190 43.478 0.00 0.00 0.00 3.33
2447 2993 5.207768 CAAACCGAACATCAAAGACTCTTG 58.792 41.667 0.00 0.00 0.00 3.02
2448 2994 4.881850 ACAAACCGAACATCAAAGACTCTT 59.118 37.500 0.00 0.00 0.00 2.85
2449 2995 4.451900 ACAAACCGAACATCAAAGACTCT 58.548 39.130 0.00 0.00 0.00 3.24
2452 2998 6.481954 AGATACAAACCGAACATCAAAGAC 57.518 37.500 0.00 0.00 0.00 3.01
2453 2999 8.610248 TTTAGATACAAACCGAACATCAAAGA 57.390 30.769 0.00 0.00 0.00 2.52
2454 3000 9.277565 CATTTAGATACAAACCGAACATCAAAG 57.722 33.333 0.00 0.00 0.00 2.77
2465 3022 8.378172 TGATTCGATCCATTTAGATACAAACC 57.622 34.615 0.00 0.00 0.00 3.27
2621 3546 7.781324 ATAAATTAAGGGCCATATGTTGAGG 57.219 36.000 6.18 0.00 0.00 3.86
2623 3548 8.646900 GGAAATAAATTAAGGGCCATATGTTGA 58.353 33.333 6.18 0.00 0.00 3.18
2635 3566 9.657419 AGAGTTGCATTTGGAAATAAATTAAGG 57.343 29.630 0.00 0.00 0.00 2.69
2639 3570 6.880529 CCCAGAGTTGCATTTGGAAATAAATT 59.119 34.615 0.00 0.00 32.34 1.82
2644 3575 3.242011 ACCCAGAGTTGCATTTGGAAAT 58.758 40.909 0.00 0.00 32.34 2.17
2645 3576 2.676748 ACCCAGAGTTGCATTTGGAAA 58.323 42.857 0.00 0.00 32.34 3.13
2665 3643 6.713762 AGACAACAAAATGGTCAGAATCAA 57.286 33.333 0.00 0.00 34.04 2.57
2686 3664 4.406003 GCTTTCCAAGACCCTGATAGTAGA 59.594 45.833 0.00 0.00 0.00 2.59
2687 3665 4.162320 TGCTTTCCAAGACCCTGATAGTAG 59.838 45.833 0.00 0.00 0.00 2.57
2930 7056 7.504924 AACAAAACATCTTCCGAATACAAGA 57.495 32.000 0.00 0.00 33.18 3.02
3117 7247 6.563037 TTACAAAGCCCCACATACTATGTA 57.437 37.500 1.19 0.00 42.70 2.29
3120 7250 7.971368 AAAATTACAAAGCCCCACATACTAT 57.029 32.000 0.00 0.00 0.00 2.12
3151 7287 1.508632 TACGCAGAACCAGCAAGTTC 58.491 50.000 10.08 10.08 45.34 3.01
3158 7294 5.519722 ACAGAAAAATTTACGCAGAACCAG 58.480 37.500 0.00 0.00 0.00 4.00
3188 8283 0.110486 TCACCCCTTTGGAGTTGCTC 59.890 55.000 0.00 0.00 38.00 4.26
3189 8284 0.178990 GTCACCCCTTTGGAGTTGCT 60.179 55.000 0.00 0.00 38.00 3.91
3190 8285 0.467290 TGTCACCCCTTTGGAGTTGC 60.467 55.000 0.00 0.00 38.00 4.17
3194 8289 0.890996 GCTGTGTCACCCCTTTGGAG 60.891 60.000 0.00 0.00 38.00 3.86
3196 8291 2.260869 CGCTGTGTCACCCCTTTGG 61.261 63.158 0.00 0.00 41.37 3.28
3197 8292 1.227823 TCGCTGTGTCACCCCTTTG 60.228 57.895 0.00 0.00 0.00 2.77
3198 8293 1.227853 GTCGCTGTGTCACCCCTTT 60.228 57.895 0.00 0.00 0.00 3.11
3199 8294 2.426023 GTCGCTGTGTCACCCCTT 59.574 61.111 0.00 0.00 0.00 3.95
3200 8295 3.626924 GGTCGCTGTGTCACCCCT 61.627 66.667 0.00 0.00 0.00 4.79
3201 8296 4.699522 GGGTCGCTGTGTCACCCC 62.700 72.222 6.82 0.00 43.79 4.95
3203 8298 0.889186 AAATGGGTCGCTGTGTCACC 60.889 55.000 0.00 0.00 0.00 4.02
3204 8299 0.517316 GAAATGGGTCGCTGTGTCAC 59.483 55.000 0.00 0.00 0.00 3.67
3205 8300 0.396435 AGAAATGGGTCGCTGTGTCA 59.604 50.000 0.00 0.00 0.00 3.58
3206 8301 2.380084 TAGAAATGGGTCGCTGTGTC 57.620 50.000 0.00 0.00 0.00 3.67
3207 8302 3.350219 AATAGAAATGGGTCGCTGTGT 57.650 42.857 0.00 0.00 0.00 3.72
3208 8303 4.876107 ACTAAATAGAAATGGGTCGCTGTG 59.124 41.667 0.00 0.00 0.00 3.66
3210 8305 4.876107 ACACTAAATAGAAATGGGTCGCTG 59.124 41.667 0.00 0.00 0.00 5.18
3212 8307 4.272748 GGACACTAAATAGAAATGGGTCGC 59.727 45.833 0.00 0.00 0.00 5.19
3213 8308 5.424757 TGGACACTAAATAGAAATGGGTCG 58.575 41.667 0.00 0.00 0.00 4.79
3214 8309 7.696992 TTTGGACACTAAATAGAAATGGGTC 57.303 36.000 0.00 0.00 0.00 4.46
3215 8310 8.664669 AATTTGGACACTAAATAGAAATGGGT 57.335 30.769 0.00 0.00 0.00 4.51
3216 8311 9.369904 CAAATTTGGACACTAAATAGAAATGGG 57.630 33.333 10.49 0.00 0.00 4.00
3220 8315 8.303876 GGCTCAAATTTGGACACTAAATAGAAA 58.696 33.333 17.90 0.00 0.00 2.52
3221 8316 7.450014 TGGCTCAAATTTGGACACTAAATAGAA 59.550 33.333 17.90 0.00 0.00 2.10
3222 8317 6.945435 TGGCTCAAATTTGGACACTAAATAGA 59.055 34.615 17.90 0.00 0.00 1.98
3223 8318 7.029563 GTGGCTCAAATTTGGACACTAAATAG 58.970 38.462 25.95 12.55 35.69 1.73
3226 8321 4.646945 TGTGGCTCAAATTTGGACACTAAA 59.353 37.500 29.67 17.08 37.87 1.85
3227 8322 4.211125 TGTGGCTCAAATTTGGACACTAA 58.789 39.130 29.67 17.57 37.87 2.24
3229 8324 2.665165 TGTGGCTCAAATTTGGACACT 58.335 42.857 29.67 0.00 37.87 3.55
3230 8325 3.665745 ATGTGGCTCAAATTTGGACAC 57.334 42.857 26.26 26.26 37.67 3.67
3231 8326 4.686191 AAATGTGGCTCAAATTTGGACA 57.314 36.364 17.90 13.66 30.99 4.02
3232 8327 5.170748 CCTAAATGTGGCTCAAATTTGGAC 58.829 41.667 17.90 11.30 33.30 4.02
3233 8328 4.837860 ACCTAAATGTGGCTCAAATTTGGA 59.162 37.500 17.90 4.50 33.30 3.53
3234 8329 5.151297 ACCTAAATGTGGCTCAAATTTGG 57.849 39.130 17.90 9.84 32.99 3.28
3235 8330 4.858692 CGACCTAAATGTGGCTCAAATTTG 59.141 41.667 12.15 12.15 32.99 2.32
3236 8331 4.522789 ACGACCTAAATGTGGCTCAAATTT 59.477 37.500 8.00 8.00 35.69 1.82
3238 8333 3.440173 CACGACCTAAATGTGGCTCAAAT 59.560 43.478 0.00 0.00 0.00 2.32
3239 8334 2.811431 CACGACCTAAATGTGGCTCAAA 59.189 45.455 0.00 0.00 0.00 2.69
3240 8335 2.422597 CACGACCTAAATGTGGCTCAA 58.577 47.619 0.00 0.00 0.00 3.02
3241 8336 1.338674 CCACGACCTAAATGTGGCTCA 60.339 52.381 0.00 0.00 45.85 4.26
3242 8337 1.369625 CCACGACCTAAATGTGGCTC 58.630 55.000 0.00 0.00 45.85 4.70
3243 8338 3.551259 CCACGACCTAAATGTGGCT 57.449 52.632 0.00 0.00 45.85 4.75
3248 8343 1.087771 GTCCGCCCACGACCTAAATG 61.088 60.000 0.00 0.00 43.93 2.32
3249 8344 1.219935 GTCCGCCCACGACCTAAAT 59.780 57.895 0.00 0.00 43.93 1.40
3250 8345 2.208619 TGTCCGCCCACGACCTAAA 61.209 57.895 0.00 0.00 43.93 1.85
3251 8346 2.601067 TGTCCGCCCACGACCTAA 60.601 61.111 0.00 0.00 43.93 2.69
3254 8349 4.612412 TTGTGTCCGCCCACGACC 62.612 66.667 0.00 0.00 43.93 4.79
3255 8350 2.181521 TTTTGTGTCCGCCCACGAC 61.182 57.895 0.00 0.00 43.93 4.34
3257 8352 2.330041 GTTTTGTGTCCGCCCACG 59.670 61.111 0.00 0.00 38.20 4.94
3264 9029 2.293399 AGAAAGCATCCGTTTTGTGTCC 59.707 45.455 0.00 0.00 0.00 4.02
3267 9032 3.558505 CAGAGAAAGCATCCGTTTTGTG 58.441 45.455 0.00 0.00 0.00 3.33
3269 9034 2.669391 GCCAGAGAAAGCATCCGTTTTG 60.669 50.000 0.00 0.00 0.00 2.44
3270 9035 1.541588 GCCAGAGAAAGCATCCGTTTT 59.458 47.619 0.00 0.00 0.00 2.43
3274 9039 0.813210 GGAGCCAGAGAAAGCATCCG 60.813 60.000 0.00 0.00 0.00 4.18
3280 9045 1.339535 GGACAAGGGAGCCAGAGAAAG 60.340 57.143 0.00 0.00 0.00 2.62
3282 9047 1.544825 CGGACAAGGGAGCCAGAGAA 61.545 60.000 0.00 0.00 0.00 2.87
3284 9049 2.286523 ACGGACAAGGGAGCCAGAG 61.287 63.158 0.00 0.00 0.00 3.35
3285 9050 2.203788 ACGGACAAGGGAGCCAGA 60.204 61.111 0.00 0.00 0.00 3.86
3286 9051 2.046892 CACGGACAAGGGAGCCAG 60.047 66.667 0.00 0.00 0.00 4.85
3287 9052 2.847234 ACACGGACAAGGGAGCCA 60.847 61.111 0.00 0.00 0.00 4.75
3289 9054 3.050275 GCACACGGACAAGGGAGC 61.050 66.667 0.00 0.00 0.00 4.70
3290 9055 2.738521 CGCACACGGACAAGGGAG 60.739 66.667 0.00 0.00 34.97 4.30
3292 9057 3.041940 GACGCACACGGACAAGGG 61.042 66.667 0.00 0.00 46.04 3.95
3293 9058 3.041940 GGACGCACACGGACAAGG 61.042 66.667 0.00 0.00 46.04 3.61
3294 9059 2.029073 AGGACGCACACGGACAAG 59.971 61.111 0.00 0.00 46.04 3.16
3321 9086 2.034066 ATGGGTGGGTGACAAGCG 59.966 61.111 0.00 0.00 0.00 4.68
3322 9087 1.678970 GGATGGGTGGGTGACAAGC 60.679 63.158 0.00 0.00 0.00 4.01
3323 9088 1.000896 GGGATGGGTGGGTGACAAG 60.001 63.158 0.00 0.00 0.00 3.16
3325 9090 2.938798 GGGGATGGGTGGGTGACA 60.939 66.667 0.00 0.00 0.00 3.58
3326 9091 2.614013 AGGGGATGGGTGGGTGAC 60.614 66.667 0.00 0.00 0.00 3.67
3327 9092 1.532894 TAGAGGGGATGGGTGGGTGA 61.533 60.000 0.00 0.00 0.00 4.02
3329 9094 1.004361 GTAGAGGGGATGGGTGGGT 59.996 63.158 0.00 0.00 0.00 4.51
3331 9096 1.596496 AAAGTAGAGGGGATGGGTGG 58.404 55.000 0.00 0.00 0.00 4.61
3332 9097 5.388599 AATAAAAGTAGAGGGGATGGGTG 57.611 43.478 0.00 0.00 0.00 4.61
3333 9098 5.073280 GCTAATAAAAGTAGAGGGGATGGGT 59.927 44.000 0.00 0.00 0.00 4.51
3336 9101 6.234177 CCAGCTAATAAAAGTAGAGGGGATG 58.766 44.000 0.00 0.00 0.00 3.51
3339 9104 4.390264 GCCAGCTAATAAAAGTAGAGGGG 58.610 47.826 0.00 0.00 0.00 4.79
3340 9105 4.390264 GGCCAGCTAATAAAAGTAGAGGG 58.610 47.826 0.00 0.00 0.00 4.30
3341 9106 4.141482 TGGGCCAGCTAATAAAAGTAGAGG 60.141 45.833 0.00 0.00 0.00 3.69
3343 9108 4.384868 GGTGGGCCAGCTAATAAAAGTAGA 60.385 45.833 27.77 0.00 34.09 2.59
3345 9110 3.372241 GGGTGGGCCAGCTAATAAAAGTA 60.372 47.826 32.43 0.00 36.17 2.24
3346 9111 2.623239 GGGTGGGCCAGCTAATAAAAGT 60.623 50.000 32.43 0.00 36.17 2.66
3347 9112 2.031870 GGGTGGGCCAGCTAATAAAAG 58.968 52.381 32.43 0.00 36.17 2.27
3348 9113 1.342574 GGGGTGGGCCAGCTAATAAAA 60.343 52.381 32.43 0.00 36.17 1.52
3349 9114 0.260523 GGGGTGGGCCAGCTAATAAA 59.739 55.000 32.43 0.00 36.17 1.40
3350 9115 0.921749 TGGGGTGGGCCAGCTAATAA 60.922 55.000 32.43 12.91 36.17 1.40
3351 9116 1.308304 TGGGGTGGGCCAGCTAATA 60.308 57.895 32.43 15.12 36.17 0.98
3352 9117 2.616893 TGGGGTGGGCCAGCTAAT 60.617 61.111 32.43 0.00 36.17 1.73
3353 9118 3.657350 GTGGGGTGGGCCAGCTAA 61.657 66.667 32.43 19.41 36.17 3.09
3362 9127 4.838152 CATCGAGCGGTGGGGTGG 62.838 72.222 0.00 0.00 0.00 4.61
3381 9146 1.153667 CGAGACAAGGAGCAGAGGC 60.154 63.158 0.00 0.00 41.61 4.70
3382 9147 1.153667 GCGAGACAAGGAGCAGAGG 60.154 63.158 0.00 0.00 0.00 3.69
3383 9148 1.153667 GGCGAGACAAGGAGCAGAG 60.154 63.158 0.00 0.00 0.00 3.35
3385 9150 2.507992 CGGCGAGACAAGGAGCAG 60.508 66.667 0.00 0.00 0.00 4.24
3386 9151 4.742201 GCGGCGAGACAAGGAGCA 62.742 66.667 12.98 0.00 0.00 4.26
3387 9152 4.443266 AGCGGCGAGACAAGGAGC 62.443 66.667 12.98 0.00 0.00 4.70
3388 9153 2.202676 GAGCGGCGAGACAAGGAG 60.203 66.667 12.98 0.00 0.00 3.69
3389 9154 2.989253 TGAGCGGCGAGACAAGGA 60.989 61.111 12.98 0.00 0.00 3.36
3390 9155 2.811317 GTGAGCGGCGAGACAAGG 60.811 66.667 12.98 0.00 0.00 3.61
3391 9156 2.811317 GGTGAGCGGCGAGACAAG 60.811 66.667 12.98 0.00 0.00 3.16
3392 9157 4.373116 GGGTGAGCGGCGAGACAA 62.373 66.667 12.98 0.00 0.00 3.18
3395 9160 4.069232 CAAGGGTGAGCGGCGAGA 62.069 66.667 12.98 0.00 0.00 4.04
3402 9167 3.426568 GACGCAGCAAGGGTGAGC 61.427 66.667 3.66 0.00 44.33 4.26
3403 9168 3.114616 CGACGCAGCAAGGGTGAG 61.115 66.667 3.66 0.00 44.33 3.51
3478 9243 2.203126 CTCCGCCCAGATTCAGCC 60.203 66.667 0.00 0.00 0.00 4.85
3479 9244 2.203126 CCTCCGCCCAGATTCAGC 60.203 66.667 0.00 0.00 0.00 4.26
3480 9245 1.153289 CACCTCCGCCCAGATTCAG 60.153 63.158 0.00 0.00 0.00 3.02
3481 9246 1.612146 TCACCTCCGCCCAGATTCA 60.612 57.895 0.00 0.00 0.00 2.57
3483 9248 3.036429 GCTCACCTCCGCCCAGATT 62.036 63.158 0.00 0.00 0.00 2.40
3484 9249 3.474570 GCTCACCTCCGCCCAGAT 61.475 66.667 0.00 0.00 0.00 2.90
3491 9256 3.948086 GACGTGACGCTCACCTCCG 62.948 68.421 4.25 4.26 44.20 4.63
3492 9257 2.126424 GACGTGACGCTCACCTCC 60.126 66.667 4.25 0.46 44.20 4.30
3493 9258 2.126424 GGACGTGACGCTCACCTC 60.126 66.667 4.25 9.32 44.20 3.85
3494 9259 3.681835 GGGACGTGACGCTCACCT 61.682 66.667 4.25 2.25 44.20 4.00
3495 9260 3.628280 GAGGGACGTGACGCTCACC 62.628 68.421 4.25 2.01 44.20 4.02
3496 9261 2.126424 GAGGGACGTGACGCTCAC 60.126 66.667 4.25 3.11 45.14 3.51
3497 9262 3.371063 GGAGGGACGTGACGCTCA 61.371 66.667 18.82 0.00 46.75 4.26
3498 9263 3.053849 GAGGAGGGACGTGACGCTC 62.054 68.421 4.25 11.52 45.09 5.03
3499 9264 3.063084 GAGGAGGGACGTGACGCT 61.063 66.667 4.25 0.00 35.82 5.07
3500 9265 4.131088 GGAGGAGGGACGTGACGC 62.131 72.222 4.25 0.00 0.00 5.19
3501 9266 2.675423 TGGAGGAGGGACGTGACG 60.675 66.667 2.24 2.24 0.00 4.35
3502 9267 1.606889 AGTGGAGGAGGGACGTGAC 60.607 63.158 0.00 0.00 0.00 3.67
3503 9268 1.606601 CAGTGGAGGAGGGACGTGA 60.607 63.158 0.00 0.00 0.00 4.35
3504 9269 2.973899 CAGTGGAGGAGGGACGTG 59.026 66.667 0.00 0.00 0.00 4.49
3505 9270 2.997897 GCAGTGGAGGAGGGACGT 60.998 66.667 0.00 0.00 0.00 4.34
3508 9273 2.363018 CGAGCAGTGGAGGAGGGA 60.363 66.667 0.00 0.00 0.00 4.20
3509 9274 4.154347 GCGAGCAGTGGAGGAGGG 62.154 72.222 0.00 0.00 0.00 4.30
3511 9276 4.504916 CGGCGAGCAGTGGAGGAG 62.505 72.222 0.00 0.00 0.00 3.69
3527 9292 4.899239 GTGCCAGATCGGGGAGCG 62.899 72.222 14.13 0.00 34.06 5.03
3529 9294 3.144120 CTCGTGCCAGATCGGGGAG 62.144 68.421 14.13 7.98 34.06 4.30
3530 9295 3.147595 CTCGTGCCAGATCGGGGA 61.148 66.667 14.13 8.16 34.06 4.81
3531 9296 4.227134 CCTCGTGCCAGATCGGGG 62.227 72.222 14.13 8.02 41.31 5.73
3532 9297 4.227134 CCCTCGTGCCAGATCGGG 62.227 72.222 7.64 7.64 34.06 5.14
3533 9298 3.432051 GACCCTCGTGCCAGATCGG 62.432 68.421 0.00 0.00 38.11 4.18
3534 9299 2.105128 GACCCTCGTGCCAGATCG 59.895 66.667 0.00 0.00 0.00 3.69
3535 9300 2.501610 GGACCCTCGTGCCAGATC 59.498 66.667 0.00 0.00 0.00 2.75
3536 9301 3.461773 CGGACCCTCGTGCCAGAT 61.462 66.667 0.00 0.00 0.00 2.90
3542 9307 4.742201 CAGCACCGGACCCTCGTG 62.742 72.222 9.46 0.00 0.00 4.35
3543 9308 4.988716 TCAGCACCGGACCCTCGT 62.989 66.667 9.46 0.00 0.00 4.18
3544 9309 4.135153 CTCAGCACCGGACCCTCG 62.135 72.222 9.46 0.00 0.00 4.63
3545 9310 3.775654 CCTCAGCACCGGACCCTC 61.776 72.222 9.46 0.00 0.00 4.30
3546 9311 3.846405 TTCCTCAGCACCGGACCCT 62.846 63.158 9.46 0.00 0.00 4.34
3558 9323 4.135153 GCCTCGCTCGCTTCCTCA 62.135 66.667 0.00 0.00 0.00 3.86
3580 9345 3.108289 CACTCTGTGCAGTCGCGG 61.108 66.667 6.13 0.00 42.97 6.46
3584 9349 2.024319 GCGTCCACTCTGTGCAGTC 61.024 63.158 0.00 0.00 31.34 3.51
3585 9350 2.029666 GCGTCCACTCTGTGCAGT 59.970 61.111 0.00 0.00 31.34 4.40
3587 9352 4.662961 CGGCGTCCACTCTGTGCA 62.663 66.667 0.00 0.00 31.34 4.57
3606 9371 4.849329 GCTACGACGCGTGGGAGG 62.849 72.222 31.00 17.95 41.39 4.30
3628 9393 4.570663 CGAGATCGGGTCGGGCAC 62.571 72.222 0.00 0.00 33.66 5.01
3630 9395 4.267503 GACGAGATCGGGTCGGGC 62.268 72.222 7.22 0.00 44.95 6.13
3631 9396 3.593794 GGACGAGATCGGGTCGGG 61.594 72.222 7.22 0.00 44.95 5.14
3633 9398 3.593794 GGGGACGAGATCGGGTCG 61.594 72.222 7.22 7.10 44.95 4.79
3635 9400 2.442272 CAGGGGACGAGATCGGGT 60.442 66.667 7.22 0.00 44.95 5.28
3636 9401 3.917760 GCAGGGGACGAGATCGGG 61.918 72.222 7.22 0.00 44.95 5.14
3637 9402 3.147595 TGCAGGGGACGAGATCGG 61.148 66.667 7.22 0.00 44.95 4.18
3639 9404 2.501610 GGTGCAGGGGACGAGATC 59.498 66.667 0.00 0.00 0.00 2.75
3664 9429 4.717313 GGTGAAGGTGGGGGCGAC 62.717 72.222 0.00 0.00 0.00 5.19
3667 9432 4.717313 GACGGTGAAGGTGGGGGC 62.717 72.222 0.00 0.00 0.00 5.80
3668 9433 4.029809 GGACGGTGAAGGTGGGGG 62.030 72.222 0.00 0.00 0.00 5.40
3669 9434 4.029809 GGGACGGTGAAGGTGGGG 62.030 72.222 0.00 0.00 0.00 4.96
3670 9435 4.029809 GGGGACGGTGAAGGTGGG 62.030 72.222 0.00 0.00 0.00 4.61
3700 9465 4.838486 GACGCGCGACCAGGAGAG 62.838 72.222 39.36 2.87 0.00 3.20
3805 9570 4.430765 CGAGGTCGAACCCCACGG 62.431 72.222 0.00 0.00 39.75 4.94
3807 9572 4.754667 GGCGAGGTCGAACCCCAC 62.755 72.222 2.94 0.00 39.75 4.61
3811 9576 2.202892 GATGGGCGAGGTCGAACC 60.203 66.667 2.94 5.15 43.02 3.62
3812 9577 1.519455 CTGATGGGCGAGGTCGAAC 60.519 63.158 2.94 0.00 43.02 3.95
3813 9578 2.892640 CTGATGGGCGAGGTCGAA 59.107 61.111 2.94 0.00 43.02 3.71
3816 9581 2.512515 GTGCTGATGGGCGAGGTC 60.513 66.667 0.00 0.00 34.52 3.85
3817 9582 4.101448 GGTGCTGATGGGCGAGGT 62.101 66.667 0.00 0.00 34.52 3.85
3818 9583 3.746949 GAGGTGCTGATGGGCGAGG 62.747 68.421 0.00 0.00 34.52 4.63
3819 9584 2.202987 GAGGTGCTGATGGGCGAG 60.203 66.667 0.00 0.00 34.52 5.03
3820 9585 3.785859 GGAGGTGCTGATGGGCGA 61.786 66.667 0.00 0.00 34.52 5.54
3822 9587 4.512914 GGGGAGGTGCTGATGGGC 62.513 72.222 0.00 0.00 0.00 5.36
3823 9588 3.813724 GGGGGAGGTGCTGATGGG 61.814 72.222 0.00 0.00 0.00 4.00
3824 9589 2.693864 AGGGGGAGGTGCTGATGG 60.694 66.667 0.00 0.00 0.00 3.51
3825 9590 2.750657 GGAGGGGGAGGTGCTGATG 61.751 68.421 0.00 0.00 0.00 3.07
3827 9592 4.741239 GGGAGGGGGAGGTGCTGA 62.741 72.222 0.00 0.00 0.00 4.26
3860 9625 4.496336 GTAGCAGGCAGGGCAGGG 62.496 72.222 0.00 0.00 0.00 4.45
3861 9626 4.845580 CGTAGCAGGCAGGGCAGG 62.846 72.222 0.00 0.00 0.00 4.85
3862 9627 4.087892 ACGTAGCAGGCAGGGCAG 62.088 66.667 0.00 0.00 0.00 4.85
3863 9628 4.393155 CACGTAGCAGGCAGGGCA 62.393 66.667 0.00 0.00 0.00 5.36
3864 9629 3.901797 AACACGTAGCAGGCAGGGC 62.902 63.158 0.00 0.00 0.00 5.19
3865 9630 1.741770 GAACACGTAGCAGGCAGGG 60.742 63.158 0.00 0.00 0.00 4.45
3866 9631 2.094659 CGAACACGTAGCAGGCAGG 61.095 63.158 0.00 0.00 0.00 4.85
3867 9632 1.073216 CTCGAACACGTAGCAGGCAG 61.073 60.000 0.00 0.00 0.00 4.85
3868 9633 1.080772 CTCGAACACGTAGCAGGCA 60.081 57.895 0.00 0.00 0.00 4.75
3869 9634 0.388134 TTCTCGAACACGTAGCAGGC 60.388 55.000 0.00 0.00 0.00 4.85
3870 9635 2.060326 TTTCTCGAACACGTAGCAGG 57.940 50.000 0.00 0.00 0.00 4.85
3871 9636 3.428870 ACATTTTCTCGAACACGTAGCAG 59.571 43.478 0.00 0.00 0.00 4.24
3872 9637 3.386486 ACATTTTCTCGAACACGTAGCA 58.614 40.909 0.00 0.00 0.00 3.49
3873 9638 3.427528 TGACATTTTCTCGAACACGTAGC 59.572 43.478 0.00 0.00 0.00 3.58
3874 9639 4.090066 CCTGACATTTTCTCGAACACGTAG 59.910 45.833 0.00 0.00 0.00 3.51
3875 9640 3.985279 CCTGACATTTTCTCGAACACGTA 59.015 43.478 0.00 0.00 0.00 3.57
3876 9641 2.800544 CCTGACATTTTCTCGAACACGT 59.199 45.455 0.00 0.00 0.00 4.49
3877 9642 2.157668 CCCTGACATTTTCTCGAACACG 59.842 50.000 0.00 0.00 0.00 4.49
3878 9643 2.095718 GCCCTGACATTTTCTCGAACAC 60.096 50.000 0.00 0.00 0.00 3.32
3879 9644 2.151202 GCCCTGACATTTTCTCGAACA 58.849 47.619 0.00 0.00 0.00 3.18
3880 9645 1.128692 CGCCCTGACATTTTCTCGAAC 59.871 52.381 0.00 0.00 0.00 3.95
3881 9646 1.438651 CGCCCTGACATTTTCTCGAA 58.561 50.000 0.00 0.00 0.00 3.71
3882 9647 0.391130 CCGCCCTGACATTTTCTCGA 60.391 55.000 0.00 0.00 0.00 4.04
3883 9648 0.391130 TCCGCCCTGACATTTTCTCG 60.391 55.000 0.00 0.00 0.00 4.04
3884 9649 1.087501 GTCCGCCCTGACATTTTCTC 58.912 55.000 0.00 0.00 35.29 2.87
3885 9650 0.400213 TGTCCGCCCTGACATTTTCT 59.600 50.000 0.00 0.00 40.22 2.52
3886 9651 2.941210 TGTCCGCCCTGACATTTTC 58.059 52.632 0.00 0.00 40.22 2.29
3892 9657 0.605319 TTCAACATGTCCGCCCTGAC 60.605 55.000 0.00 0.00 35.77 3.51
3893 9658 0.109532 TTTCAACATGTCCGCCCTGA 59.890 50.000 0.00 0.00 0.00 3.86
3894 9659 2.639970 TTTCAACATGTCCGCCCTG 58.360 52.632 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.