Multiple sequence alignment - TraesCS5A01G449900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G449900 chr5A 100.000 2884 0 0 979 3862 631664291 631667174 0.000000e+00 5326.0
1 TraesCS5A01G449900 chr5A 100.000 1868 0 0 4163 6030 631667475 631669342 0.000000e+00 3450.0
2 TraesCS5A01G449900 chr5A 100.000 658 0 0 1 658 631663313 631663970 0.000000e+00 1216.0
3 TraesCS5A01G449900 chr5A 100.000 36 0 0 4198 4233 332289203 332289238 3.900000e-07 67.6
4 TraesCS5A01G449900 chr5A 100.000 31 0 0 3832 3862 143658053 143658083 2.350000e-04 58.4
5 TraesCS5A01G449900 chr5B 92.807 1418 74 17 2098 3499 632153815 632155220 0.000000e+00 2028.0
6 TraesCS5A01G449900 chr5B 91.500 1000 53 15 986 1972 632152835 632153815 0.000000e+00 1347.0
7 TraesCS5A01G449900 chr5B 92.216 758 40 11 4867 5618 632156099 632156843 0.000000e+00 1055.0
8 TraesCS5A01G449900 chr5B 90.816 294 20 4 3501 3790 632155179 632155469 2.640000e-103 387.0
9 TraesCS5A01G449900 chr5B 80.037 546 65 27 4266 4800 632155560 632156072 1.240000e-96 364.0
10 TraesCS5A01G449900 chr5B 88.000 300 25 5 5742 6030 632157703 632158002 1.610000e-90 344.0
11 TraesCS5A01G449900 chr5B 87.342 316 9 13 344 658 632152096 632152381 3.480000e-87 333.0
12 TraesCS5A01G449900 chr5B 92.143 140 8 3 112 249 622393431 622393569 1.710000e-45 195.0
13 TraesCS5A01G449900 chr5B 93.694 111 5 2 1 109 632151874 632151984 1.340000e-36 165.0
14 TraesCS5A01G449900 chr5B 92.473 93 7 0 5614 5706 632157512 632157604 3.790000e-27 134.0
15 TraesCS5A01G449900 chr3B 88.821 1637 117 27 985 2609 212889172 212887590 0.000000e+00 1949.0
16 TraesCS5A01G449900 chr3B 88.772 855 77 14 2659 3501 212887592 212886745 0.000000e+00 1029.0
17 TraesCS5A01G449900 chr3B 86.441 295 23 6 3501 3791 212886788 212886507 2.110000e-79 307.0
18 TraesCS5A01G449900 chr3B 96.552 58 1 1 4176 4233 236507747 236507691 1.790000e-15 95.3
19 TraesCS5A01G449900 chr3B 88.889 54 5 1 4176 4229 481313660 481313608 1.400000e-06 65.8
20 TraesCS5A01G449900 chr5D 86.744 1373 114 42 4266 5618 503672488 503673812 0.000000e+00 1465.0
21 TraesCS5A01G449900 chr5D 94.420 896 39 6 979 1872 503669741 503670627 0.000000e+00 1367.0
22 TraesCS5A01G449900 chr5D 91.472 856 59 10 2659 3501 503671282 503672136 0.000000e+00 1164.0
23 TraesCS5A01G449900 chr5D 88.922 677 51 17 1941 2609 503670624 503671284 0.000000e+00 813.0
24 TraesCS5A01G449900 chr5D 91.089 303 22 3 3501 3799 503672093 503672394 7.280000e-109 405.0
25 TraesCS5A01G449900 chr5D 84.778 427 15 19 236 656 503669271 503669653 3.410000e-102 383.0
26 TraesCS5A01G449900 chr5D 88.000 300 25 5 5742 6030 503674434 503674733 1.610000e-90 344.0
27 TraesCS5A01G449900 chr5D 96.491 114 4 0 125 238 70640482 70640595 7.980000e-44 189.0
28 TraesCS5A01G449900 chr5D 93.023 129 7 2 124 250 61483802 61483930 2.870000e-43 187.0
29 TraesCS5A01G449900 chr5D 92.683 123 3 2 1 122 503669147 503669264 8.030000e-39 172.0
30 TraesCS5A01G449900 chr5D 93.548 93 6 0 5614 5706 503674243 503674335 8.150000e-29 139.0
31 TraesCS5A01G449900 chr2A 95.798 119 4 1 127 244 73898436 73898554 2.220000e-44 191.0
32 TraesCS5A01G449900 chr2A 96.522 115 3 1 124 237 180979151 180979265 7.980000e-44 189.0
33 TraesCS5A01G449900 chr2A 98.276 58 0 1 4176 4233 515306266 515306322 3.850000e-17 100.0
34 TraesCS5A01G449900 chr1D 95.652 115 5 0 127 241 459859039 459859153 1.030000e-42 185.0
35 TraesCS5A01G449900 chr1D 97.059 34 1 0 3828 3861 6139951 6139918 2.350000e-04 58.4
36 TraesCS5A01G449900 chr1D 100.000 30 0 0 3831 3860 9887531 9887560 8.440000e-04 56.5
37 TraesCS5A01G449900 chr1D 100.000 30 0 0 3831 3860 10029060 10029031 8.440000e-04 56.5
38 TraesCS5A01G449900 chr1D 94.286 35 2 0 3826 3860 112467780 112467814 3.000000e-03 54.7
39 TraesCS5A01G449900 chr1A 95.690 116 4 1 126 240 384334556 384334441 1.030000e-42 185.0
40 TraesCS5A01G449900 chr1A 98.333 60 1 0 4176 4235 583933319 583933378 8.270000e-19 106.0
41 TraesCS5A01G449900 chr3D 92.857 126 7 2 116 241 607554230 607554353 1.340000e-41 182.0
42 TraesCS5A01G449900 chr7D 92.126 127 7 3 116 241 30960172 30960296 6.210000e-40 176.0
43 TraesCS5A01G449900 chr4D 79.581 191 35 4 1020 1209 451279445 451279632 3.790000e-27 134.0
44 TraesCS5A01G449900 chr4A 79.581 191 35 4 1020 1209 15655000 15654813 3.790000e-27 134.0
45 TraesCS5A01G449900 chr4B 79.058 191 36 4 1020 1209 564866512 564866699 1.760000e-25 128.0
46 TraesCS5A01G449900 chr2B 93.939 66 1 2 4171 4236 47660926 47660864 4.970000e-16 97.1
47 TraesCS5A01G449900 chr2B 100.000 31 0 0 3832 3862 752867773 752867803 2.350000e-04 58.4
48 TraesCS5A01G449900 chr2B 100.000 28 0 0 3835 3862 171793447 171793420 1.100000e-02 52.8
49 TraesCS5A01G449900 chr6D 96.226 53 1 1 4184 4236 154596252 154596201 1.080000e-12 86.1
50 TraesCS5A01G449900 chr6D 100.000 30 0 0 3833 3862 350632401 350632430 8.440000e-04 56.5
51 TraesCS5A01G449900 chr3A 93.103 58 4 0 5742 5799 710842678 710842735 1.080000e-12 86.1
52 TraesCS5A01G449900 chr6A 100.000 36 0 0 4198 4233 594732176 594732211 3.900000e-07 67.6
53 TraesCS5A01G449900 chr6A 82.609 69 5 4 4176 4241 144524230 144524294 3.000000e-03 54.7
54 TraesCS5A01G449900 chr2D 100.000 31 0 0 3832 3862 383812650 383812680 2.350000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G449900 chr5A 631663313 631669342 6029 False 3330.666667 5326 100.000000 1 6030 3 chr5A.!!$F3 6029
1 TraesCS5A01G449900 chr5B 632151874 632158002 6128 False 684.111111 2028 89.876111 1 6030 9 chr5B.!!$F2 6029
2 TraesCS5A01G449900 chr3B 212886507 212889172 2665 True 1095.000000 1949 88.011333 985 3791 3 chr3B.!!$R3 2806
3 TraesCS5A01G449900 chr5D 503669147 503674733 5586 False 694.666667 1465 90.184000 1 6030 9 chr5D.!!$F3 6029

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
468 478 0.107800 TTGAACCGACAAACGACCCA 60.108 50.000 0.00 0.0 45.77 4.51 F
475 485 0.602905 GACAAACGACCCACCAGGAG 60.603 60.000 0.00 0.0 39.89 3.69 F
1573 1718 0.039618 ATGGGGCCAGTGGTTGTAAG 59.960 55.000 11.74 0.0 0.00 2.34 F
1807 1960 0.376152 CATTGCTGGCTTGCTAGACG 59.624 55.000 10.14 0.0 29.01 4.18 F
2996 3173 1.069022 GCATACTGTGTGGTTGCTGTG 60.069 52.381 6.67 0.0 0.00 3.66 F
3507 3690 0.104304 TCTTTAATCCCGCTCCGCTC 59.896 55.000 0.00 0.0 0.00 5.03 F
3842 4086 0.105913 AGGCTGGCTAGTACTCCCTC 60.106 60.000 0.13 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1425 1568 0.036306 AGAAGCCTGGTACCAAACGG 59.964 55.0 17.11 14.92 0.00 4.44 R
1807 1960 0.109132 GGCTGCCATTTGCTACACAC 60.109 55.0 15.17 0.00 42.00 3.82 R
2996 3173 0.038166 TCTGTTGCCCCACTGATTCC 59.962 55.0 0.00 0.00 0.00 3.01 R
3130 3307 0.539438 TAGCCCCACACTGCCAAAAG 60.539 55.0 0.00 0.00 0.00 2.27 R
4860 5114 0.036199 TTGGGCCTGAAATTGCATGC 60.036 50.0 11.82 11.82 0.00 4.06 R
5002 5256 0.033601 ACTTGCCACAGTTGAACCCA 60.034 50.0 0.00 0.00 0.00 4.51 R
5611 5869 0.388649 CAGCGTACGCATATCCCTCC 60.389 60.0 38.58 8.51 44.88 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 108 4.787381 TCATACAATTACGCACCAATCG 57.213 40.909 0.00 0.00 0.00 3.34
109 112 0.450184 AATTACGCACCAATCGCACC 59.550 50.000 0.00 0.00 0.00 5.01
110 113 0.392461 ATTACGCACCAATCGCACCT 60.392 50.000 0.00 0.00 0.00 4.00
122 125 0.880278 TCGCACCTCACACAAGCTTC 60.880 55.000 0.00 0.00 0.00 3.86
124 127 1.605457 CGCACCTCACACAAGCTTCTA 60.605 52.381 0.00 0.00 0.00 2.10
125 128 2.072298 GCACCTCACACAAGCTTCTAG 58.928 52.381 0.00 0.00 0.00 2.43
126 129 2.548920 GCACCTCACACAAGCTTCTAGT 60.549 50.000 0.00 0.00 0.00 2.57
127 130 3.306088 GCACCTCACACAAGCTTCTAGTA 60.306 47.826 0.00 0.00 0.00 1.82
128 131 4.238514 CACCTCACACAAGCTTCTAGTAC 58.761 47.826 0.00 0.00 0.00 2.73
129 132 4.021894 CACCTCACACAAGCTTCTAGTACT 60.022 45.833 0.00 0.00 0.00 2.73
130 133 4.218852 ACCTCACACAAGCTTCTAGTACTC 59.781 45.833 0.00 0.00 0.00 2.59
131 134 4.381079 CCTCACACAAGCTTCTAGTACTCC 60.381 50.000 0.00 0.00 0.00 3.85
132 135 3.510360 TCACACAAGCTTCTAGTACTCCC 59.490 47.826 0.00 0.00 0.00 4.30
133 136 3.511934 CACACAAGCTTCTAGTACTCCCT 59.488 47.826 0.00 0.00 0.00 4.20
134 137 3.764972 ACACAAGCTTCTAGTACTCCCTC 59.235 47.826 0.00 0.00 0.00 4.30
135 138 3.131400 CACAAGCTTCTAGTACTCCCTCC 59.869 52.174 0.00 0.00 0.00 4.30
136 139 2.351706 AGCTTCTAGTACTCCCTCCG 57.648 55.000 0.00 0.00 0.00 4.63
137 140 1.565288 AGCTTCTAGTACTCCCTCCGT 59.435 52.381 0.00 0.00 0.00 4.69
138 141 2.025131 AGCTTCTAGTACTCCCTCCGTT 60.025 50.000 0.00 0.00 0.00 4.44
139 142 2.759535 GCTTCTAGTACTCCCTCCGTTT 59.240 50.000 0.00 0.00 0.00 3.60
140 143 3.950395 GCTTCTAGTACTCCCTCCGTTTA 59.050 47.826 0.00 0.00 0.00 2.01
141 144 4.202000 GCTTCTAGTACTCCCTCCGTTTAC 60.202 50.000 0.00 0.00 0.00 2.01
142 145 4.851639 TCTAGTACTCCCTCCGTTTACT 57.148 45.455 0.00 0.00 0.00 2.24
143 146 5.184892 TCTAGTACTCCCTCCGTTTACTT 57.815 43.478 0.00 0.00 0.00 2.24
144 147 5.574188 TCTAGTACTCCCTCCGTTTACTTT 58.426 41.667 0.00 0.00 0.00 2.66
145 148 6.012745 TCTAGTACTCCCTCCGTTTACTTTT 58.987 40.000 0.00 0.00 0.00 2.27
146 149 4.891260 AGTACTCCCTCCGTTTACTTTTG 58.109 43.478 0.00 0.00 0.00 2.44
147 150 3.851458 ACTCCCTCCGTTTACTTTTGT 57.149 42.857 0.00 0.00 0.00 2.83
148 151 4.961438 ACTCCCTCCGTTTACTTTTGTA 57.039 40.909 0.00 0.00 0.00 2.41
149 152 5.294734 ACTCCCTCCGTTTACTTTTGTAA 57.705 39.130 0.00 0.00 42.54 2.41
150 153 5.303165 ACTCCCTCCGTTTACTTTTGTAAG 58.697 41.667 0.00 0.00 44.60 2.34
151 154 5.163269 ACTCCCTCCGTTTACTTTTGTAAGT 60.163 40.000 0.00 0.00 44.60 2.24
152 155 5.299949 TCCCTCCGTTTACTTTTGTAAGTC 58.700 41.667 0.00 0.00 44.60 3.01
153 156 4.151157 CCCTCCGTTTACTTTTGTAAGTCG 59.849 45.833 0.00 0.00 44.60 4.18
154 157 4.746611 CCTCCGTTTACTTTTGTAAGTCGT 59.253 41.667 0.00 0.00 44.60 4.34
155 158 5.234972 CCTCCGTTTACTTTTGTAAGTCGTT 59.765 40.000 0.00 0.00 44.60 3.85
156 159 6.238184 CCTCCGTTTACTTTTGTAAGTCGTTT 60.238 38.462 0.00 0.00 44.60 3.60
157 160 6.704819 TCCGTTTACTTTTGTAAGTCGTTTC 58.295 36.000 0.00 0.00 44.60 2.78
158 161 6.312426 TCCGTTTACTTTTGTAAGTCGTTTCA 59.688 34.615 0.00 0.00 44.60 2.69
159 162 6.626095 CCGTTTACTTTTGTAAGTCGTTTCAG 59.374 38.462 0.00 0.00 44.60 3.02
160 163 7.393327 CGTTTACTTTTGTAAGTCGTTTCAGA 58.607 34.615 0.00 0.00 44.60 3.27
161 164 7.369026 CGTTTACTTTTGTAAGTCGTTTCAGAC 59.631 37.037 0.00 0.00 44.60 3.51
162 165 7.830940 TTACTTTTGTAAGTCGTTTCAGACA 57.169 32.000 0.00 0.00 43.45 3.41
163 166 6.730960 ACTTTTGTAAGTCGTTTCAGACAA 57.269 33.333 0.00 0.00 40.60 3.18
164 167 7.316544 ACTTTTGTAAGTCGTTTCAGACAAT 57.683 32.000 0.00 0.00 40.60 2.71
165 168 7.758495 ACTTTTGTAAGTCGTTTCAGACAATT 58.242 30.769 0.00 0.00 40.60 2.32
166 169 7.908601 ACTTTTGTAAGTCGTTTCAGACAATTC 59.091 33.333 0.00 0.00 40.60 2.17
167 170 6.912203 TTGTAAGTCGTTTCAGACAATTCA 57.088 33.333 0.00 0.00 43.24 2.57
168 171 6.912203 TGTAAGTCGTTTCAGACAATTCAA 57.088 33.333 0.00 0.00 43.24 2.69
169 172 7.310072 TGTAAGTCGTTTCAGACAATTCAAA 57.690 32.000 0.00 0.00 43.24 2.69
170 173 7.753659 TGTAAGTCGTTTCAGACAATTCAAAA 58.246 30.769 0.00 0.00 43.24 2.44
171 174 8.402472 TGTAAGTCGTTTCAGACAATTCAAAAT 58.598 29.630 0.00 0.00 43.24 1.82
172 175 9.872757 GTAAGTCGTTTCAGACAATTCAAAATA 57.127 29.630 0.00 0.00 43.24 1.40
174 177 7.584987 AGTCGTTTCAGACAATTCAAAATAGG 58.415 34.615 0.00 0.00 43.24 2.57
175 178 6.305638 GTCGTTTCAGACAATTCAAAATAGGC 59.694 38.462 0.00 0.00 40.65 3.93
176 179 6.206634 TCGTTTCAGACAATTCAAAATAGGCT 59.793 34.615 0.00 0.00 0.00 4.58
177 180 6.306356 CGTTTCAGACAATTCAAAATAGGCTG 59.694 38.462 0.00 0.00 0.00 4.85
178 181 6.899393 TTCAGACAATTCAAAATAGGCTGT 57.101 33.333 0.00 0.00 0.00 4.40
179 182 6.899393 TCAGACAATTCAAAATAGGCTGTT 57.101 33.333 0.00 0.00 0.00 3.16
180 183 7.288810 TCAGACAATTCAAAATAGGCTGTTT 57.711 32.000 3.12 3.12 0.00 2.83
181 184 7.725251 TCAGACAATTCAAAATAGGCTGTTTT 58.275 30.769 15.20 15.20 0.00 2.43
182 185 8.855110 TCAGACAATTCAAAATAGGCTGTTTTA 58.145 29.630 19.57 7.84 0.00 1.52
183 186 8.915654 CAGACAATTCAAAATAGGCTGTTTTAC 58.084 33.333 19.57 7.47 0.00 2.01
184 187 8.637986 AGACAATTCAAAATAGGCTGTTTTACA 58.362 29.630 19.57 10.87 0.00 2.41
185 188 8.587952 ACAATTCAAAATAGGCTGTTTTACAC 57.412 30.769 19.57 0.00 0.00 2.90
186 189 8.200792 ACAATTCAAAATAGGCTGTTTTACACA 58.799 29.630 19.57 6.59 0.00 3.72
187 190 9.206870 CAATTCAAAATAGGCTGTTTTACACAT 57.793 29.630 19.57 8.29 33.76 3.21
188 191 9.777297 AATTCAAAATAGGCTGTTTTACACATT 57.223 25.926 19.57 12.65 33.76 2.71
189 192 8.586570 TTCAAAATAGGCTGTTTTACACATTG 57.413 30.769 19.57 8.44 33.76 2.82
190 193 7.721402 TCAAAATAGGCTGTTTTACACATTGT 58.279 30.769 19.57 0.00 33.76 2.71
191 194 7.865385 TCAAAATAGGCTGTTTTACACATTGTC 59.135 33.333 19.57 0.00 33.76 3.18
192 195 7.524717 AAATAGGCTGTTTTACACATTGTCT 57.475 32.000 3.12 0.00 33.76 3.41
193 196 4.836125 AGGCTGTTTTACACATTGTCTG 57.164 40.909 0.00 0.00 33.76 3.51
194 197 4.460263 AGGCTGTTTTACACATTGTCTGA 58.540 39.130 0.00 0.00 33.76 3.27
195 198 4.887071 AGGCTGTTTTACACATTGTCTGAA 59.113 37.500 0.00 0.00 33.76 3.02
196 199 5.359576 AGGCTGTTTTACACATTGTCTGAAA 59.640 36.000 0.00 0.00 33.76 2.69
197 200 6.040842 AGGCTGTTTTACACATTGTCTGAAAT 59.959 34.615 0.00 0.00 33.76 2.17
198 201 6.144402 GGCTGTTTTACACATTGTCTGAAATG 59.856 38.462 9.50 9.50 42.21 2.32
200 203 7.096477 GCTGTTTTACACATTGTCTGAAATGTC 60.096 37.037 12.25 5.04 45.47 3.06
201 204 7.995289 TGTTTTACACATTGTCTGAAATGTCT 58.005 30.769 12.25 6.84 45.47 3.41
202 205 8.465999 TGTTTTACACATTGTCTGAAATGTCTT 58.534 29.630 12.25 7.68 45.47 3.01
203 206 8.958043 GTTTTACACATTGTCTGAAATGTCTTC 58.042 33.333 12.25 0.00 45.47 2.87
204 207 7.800155 TTACACATTGTCTGAAATGTCTTCA 57.200 32.000 12.25 0.00 45.47 3.02
205 208 6.698008 ACACATTGTCTGAAATGTCTTCAA 57.302 33.333 12.25 0.00 45.47 2.69
206 209 6.732154 ACACATTGTCTGAAATGTCTTCAAG 58.268 36.000 12.25 6.29 45.47 3.02
207 210 6.147581 CACATTGTCTGAAATGTCTTCAAGG 58.852 40.000 12.25 0.00 45.47 3.61
208 211 5.829924 ACATTGTCTGAAATGTCTTCAAGGT 59.170 36.000 10.41 0.00 45.47 3.50
209 212 6.016777 ACATTGTCTGAAATGTCTTCAAGGTC 60.017 38.462 10.41 0.00 45.47 3.85
210 213 5.296151 TGTCTGAAATGTCTTCAAGGTCT 57.704 39.130 0.00 0.00 0.00 3.85
211 214 5.684704 TGTCTGAAATGTCTTCAAGGTCTT 58.315 37.500 0.00 0.00 0.00 3.01
212 215 6.826668 TGTCTGAAATGTCTTCAAGGTCTTA 58.173 36.000 0.00 0.00 0.00 2.10
213 216 7.453393 TGTCTGAAATGTCTTCAAGGTCTTAT 58.547 34.615 0.00 0.00 0.00 1.73
214 217 8.593679 TGTCTGAAATGTCTTCAAGGTCTTATA 58.406 33.333 0.00 0.00 0.00 0.98
215 218 9.436957 GTCTGAAATGTCTTCAAGGTCTTATAA 57.563 33.333 0.00 0.00 0.00 0.98
221 224 9.793259 AATGTCTTCAAGGTCTTATAAAAGTGA 57.207 29.630 0.00 0.00 34.13 3.41
222 225 9.793259 ATGTCTTCAAGGTCTTATAAAAGTGAA 57.207 29.630 0.00 0.00 34.13 3.18
223 226 9.052759 TGTCTTCAAGGTCTTATAAAAGTGAAC 57.947 33.333 0.00 0.00 34.13 3.18
224 227 9.052759 GTCTTCAAGGTCTTATAAAAGTGAACA 57.947 33.333 0.00 0.00 34.13 3.18
225 228 9.273016 TCTTCAAGGTCTTATAAAAGTGAACAG 57.727 33.333 0.00 0.00 34.13 3.16
226 229 9.273016 CTTCAAGGTCTTATAAAAGTGAACAGA 57.727 33.333 0.00 0.00 34.13 3.41
227 230 8.833231 TCAAGGTCTTATAAAAGTGAACAGAG 57.167 34.615 0.00 0.00 34.13 3.35
228 231 7.878127 TCAAGGTCTTATAAAAGTGAACAGAGG 59.122 37.037 0.00 0.00 34.13 3.69
229 232 6.712276 AGGTCTTATAAAAGTGAACAGAGGG 58.288 40.000 0.00 0.00 34.13 4.30
230 233 6.500751 AGGTCTTATAAAAGTGAACAGAGGGA 59.499 38.462 0.00 0.00 34.13 4.20
231 234 6.819146 GGTCTTATAAAAGTGAACAGAGGGAG 59.181 42.308 0.00 0.00 34.13 4.30
232 235 7.387643 GTCTTATAAAAGTGAACAGAGGGAGT 58.612 38.462 0.00 0.00 34.13 3.85
233 236 8.529476 GTCTTATAAAAGTGAACAGAGGGAGTA 58.471 37.037 0.00 0.00 34.13 2.59
234 237 8.529476 TCTTATAAAAGTGAACAGAGGGAGTAC 58.471 37.037 0.00 0.00 34.13 2.73
293 296 7.936847 TGTATTTGCAGGAGTAGAAAAGAAGAA 59.063 33.333 0.00 0.00 0.00 2.52
295 298 6.867662 TTGCAGGAGTAGAAAAGAAGAAAG 57.132 37.500 0.00 0.00 0.00 2.62
296 299 5.308825 TGCAGGAGTAGAAAAGAAGAAAGG 58.691 41.667 0.00 0.00 0.00 3.11
297 300 5.071788 TGCAGGAGTAGAAAAGAAGAAAGGA 59.928 40.000 0.00 0.00 0.00 3.36
300 303 6.146347 CAGGAGTAGAAAAGAAGAAAGGAACG 59.854 42.308 0.00 0.00 0.00 3.95
301 304 5.990386 GGAGTAGAAAAGAAGAAAGGAACGT 59.010 40.000 0.00 0.00 0.00 3.99
302 305 7.015001 AGGAGTAGAAAAGAAGAAAGGAACGTA 59.985 37.037 0.00 0.00 0.00 3.57
303 306 7.328982 GGAGTAGAAAAGAAGAAAGGAACGTAG 59.671 40.741 0.00 0.00 0.00 3.51
304 307 7.949434 AGTAGAAAAGAAGAAAGGAACGTAGA 58.051 34.615 0.00 0.00 0.00 2.59
305 308 8.586744 AGTAGAAAAGAAGAAAGGAACGTAGAT 58.413 33.333 0.00 0.00 0.00 1.98
306 309 9.852091 GTAGAAAAGAAGAAAGGAACGTAGATA 57.148 33.333 0.00 0.00 0.00 1.98
307 310 8.989653 AGAAAAGAAGAAAGGAACGTAGATAG 57.010 34.615 0.00 0.00 0.00 2.08
309 312 9.205719 GAAAAGAAGAAAGGAACGTAGATAGTT 57.794 33.333 0.00 0.00 34.07 2.24
311 314 9.557061 AAAGAAGAAAGGAACGTAGATAGTTTT 57.443 29.630 0.00 0.00 31.14 2.43
312 315 9.557061 AAGAAGAAAGGAACGTAGATAGTTTTT 57.443 29.630 0.00 0.00 31.14 1.94
456 466 0.820482 ACCCCGGAAAAGTTGAACCG 60.820 55.000 0.73 0.00 44.16 4.44
459 469 1.301423 CCGGAAAAGTTGAACCGACA 58.699 50.000 14.36 0.00 46.94 4.35
461 471 2.097791 CCGGAAAAGTTGAACCGACAAA 59.902 45.455 14.36 0.00 46.94 2.83
468 478 0.107800 TTGAACCGACAAACGACCCA 60.108 50.000 0.00 0.00 45.77 4.51
469 479 0.810823 TGAACCGACAAACGACCCAC 60.811 55.000 0.00 0.00 45.77 4.61
470 480 1.501337 GAACCGACAAACGACCCACC 61.501 60.000 0.00 0.00 45.77 4.61
471 481 2.109387 CCGACAAACGACCCACCA 59.891 61.111 0.00 0.00 45.77 4.17
472 482 1.959226 CCGACAAACGACCCACCAG 60.959 63.158 0.00 0.00 45.77 4.00
473 483 1.959226 CGACAAACGACCCACCAGG 60.959 63.158 0.00 0.00 45.77 4.45
474 484 1.448497 GACAAACGACCCACCAGGA 59.552 57.895 0.00 0.00 39.89 3.86
475 485 0.602905 GACAAACGACCCACCAGGAG 60.603 60.000 0.00 0.00 39.89 3.69
476 486 1.302511 CAAACGACCCACCAGGAGG 60.303 63.158 0.00 0.00 39.89 4.30
483 493 3.406200 CCACCAGGAGGGAGCCAG 61.406 72.222 0.00 0.00 41.15 4.85
484 494 4.106925 CACCAGGAGGGAGCCAGC 62.107 72.222 0.00 0.00 41.15 4.85
487 497 3.795041 CAGGAGGGAGCCAGCCAG 61.795 72.222 0.00 0.00 0.00 4.85
1319 1461 4.830765 TCGATTTGGGCTCGCCGG 62.831 66.667 0.00 0.00 36.11 6.13
1338 1480 2.714530 GCGTAGATCTCGCGGATTC 58.285 57.895 18.93 0.04 43.94 2.52
1422 1565 2.032681 GCGGGAGGTTGTTGCTCT 59.967 61.111 0.00 0.00 0.00 4.09
1425 1568 2.035442 GGGAGGTTGTTGCTCTCGC 61.035 63.158 0.00 0.00 34.31 5.03
1426 1569 2.035442 GGAGGTTGTTGCTCTCGCC 61.035 63.158 0.00 0.00 34.43 5.54
1436 1579 2.098831 GCTCTCGCCGTTTGGTACC 61.099 63.158 4.43 4.43 37.67 3.34
1486 1629 1.405121 GGTATCGGCCAGTTCGAGTTT 60.405 52.381 2.24 0.00 40.09 2.66
1573 1718 0.039618 ATGGGGCCAGTGGTTGTAAG 59.960 55.000 11.74 0.00 0.00 2.34
1612 1757 6.112734 ACCGACATCAGCAGTAAAATAATCA 58.887 36.000 0.00 0.00 0.00 2.57
1696 1841 1.605710 GGCTTGCTAGGCATGTGTATG 59.394 52.381 16.52 0.00 45.79 2.39
1743 1896 2.512485 TGGCAGTTCATTTGTTGCTG 57.488 45.000 0.00 0.00 36.79 4.41
1745 1898 2.144482 GCAGTTCATTTGTTGCTGCT 57.856 45.000 0.00 0.00 46.20 4.24
1746 1899 2.476821 GCAGTTCATTTGTTGCTGCTT 58.523 42.857 0.00 0.00 46.20 3.91
1747 1900 3.641648 GCAGTTCATTTGTTGCTGCTTA 58.358 40.909 0.00 0.00 46.20 3.09
1752 1905 4.852134 TCATTTGTTGCTGCTTACATGT 57.148 36.364 2.69 2.69 0.00 3.21
1807 1960 0.376152 CATTGCTGGCTTGCTAGACG 59.624 55.000 10.14 0.00 29.01 4.18
1872 2029 5.074377 TCCAGATAAGCAATGCCCCTTAATA 59.926 40.000 0.00 0.00 0.00 0.98
1873 2030 5.774690 CCAGATAAGCAATGCCCCTTAATAA 59.225 40.000 0.00 0.00 0.00 1.40
1874 2031 6.438425 CCAGATAAGCAATGCCCCTTAATAAT 59.562 38.462 0.00 0.00 0.00 1.28
1875 2032 7.363268 CCAGATAAGCAATGCCCCTTAATAATC 60.363 40.741 0.00 0.00 0.00 1.75
1877 2034 8.614814 AGATAAGCAATGCCCCTTAATAATCTA 58.385 33.333 0.00 0.00 0.00 1.98
1878 2035 9.413734 GATAAGCAATGCCCCTTAATAATCTAT 57.586 33.333 0.00 0.00 0.00 1.98
1879 2036 9.774071 ATAAGCAATGCCCCTTAATAATCTATT 57.226 29.630 0.00 0.00 0.00 1.73
1976 2135 6.375455 TCATACCCTTGATCTTTTTGAAGAGC 59.625 38.462 0.00 0.00 35.87 4.09
2048 2207 7.611213 AAATCAACCTACATAAGTGTGTAGC 57.389 36.000 9.13 0.00 46.49 3.58
2072 2231 3.888323 TGTTTCAGCCTTTTATGACAGCA 59.112 39.130 0.00 0.00 0.00 4.41
2084 2243 6.588348 TTTATGACAGCAGATCACATTACG 57.412 37.500 0.00 0.00 0.00 3.18
2192 2352 7.014615 ACCATAAGAATGAATATTCCCTTGCAC 59.985 37.037 12.90 0.00 42.99 4.57
2249 2412 5.960811 TCCTCTCTGATTGGACTGTAGATTT 59.039 40.000 0.00 0.00 0.00 2.17
2262 2425 6.294176 GGACTGTAGATTTGATGCACTTGTTT 60.294 38.462 0.00 0.00 0.00 2.83
2302 2465 3.065371 GCACTTTGCAACAACACTAGTCT 59.935 43.478 0.00 0.00 44.26 3.24
2355 2520 6.417930 AGCTTTAAAACTGTTTCGAGATTTGC 59.582 34.615 6.20 4.17 0.00 3.68
2419 2584 5.471456 AGTTCTGACATTTGGCTTCTACTTG 59.529 40.000 0.00 0.00 0.00 3.16
2432 2597 9.679661 TTGGCTTCTACTTGTGAATATTCAATA 57.320 29.630 19.55 9.35 39.21 1.90
2459 2624 5.088739 GCATTTTACTGTACACAGATGCAC 58.911 41.667 20.36 2.97 46.59 4.57
2498 2665 6.747125 AGCATCAGTAGAGTACATCTCATTG 58.253 40.000 0.00 0.00 44.98 2.82
2502 2669 5.068329 TCAGTAGAGTACATCTCATTGCCAG 59.932 44.000 0.00 0.00 44.98 4.85
2515 2682 2.309528 TTGCCAGTCTAGCAATACCG 57.690 50.000 1.18 0.00 44.95 4.02
2538 2705 9.337396 ACCGTTCATACATTACATGATTATGTT 57.663 29.630 8.57 0.00 45.01 2.71
2539 2706 9.811655 CCGTTCATACATTACATGATTATGTTC 57.188 33.333 8.57 5.17 45.01 3.18
2624 2792 5.872963 TGTGTACTGAGGTAGTAGAAGACA 58.127 41.667 0.00 0.00 42.37 3.41
2715 2887 8.511604 AGTGCTACTATGTGAATTTTAATGCT 57.488 30.769 0.00 0.00 0.00 3.79
2732 2905 1.885887 TGCTCAATTCCTTCAAACCCG 59.114 47.619 0.00 0.00 0.00 5.28
2788 2964 7.395772 TGACAATACTGCTGGGAAAAATTGATA 59.604 33.333 0.00 0.00 0.00 2.15
2853 3029 6.881065 TGCAGACATAGCACTTCTCTAAAAAT 59.119 34.615 0.00 0.00 37.02 1.82
2919 3096 6.207928 CAGAACACTACATTGCATTTGTTGA 58.792 36.000 15.18 0.00 0.00 3.18
2993 3170 1.527034 CAGCATACTGTGTGGTTGCT 58.473 50.000 6.51 2.93 44.05 3.91
2996 3173 1.069022 GCATACTGTGTGGTTGCTGTG 60.069 52.381 6.67 0.00 0.00 3.66
3047 3224 2.845363 TCTTGGTTCGGGTTAAGGAC 57.155 50.000 0.00 0.00 0.00 3.85
3059 3236 3.504520 GGGTTAAGGACGATTTCAGCAAA 59.495 43.478 0.00 0.00 0.00 3.68
3130 3307 0.584876 GAGTTTGGGTACGTGTGTGC 59.415 55.000 0.00 0.00 0.00 4.57
3136 3313 0.309612 GGGTACGTGTGTGCTTTTGG 59.690 55.000 0.00 0.00 0.00 3.28
3169 3348 8.692710 GGGGCTATTTAAAATATATGGCCTTAC 58.307 37.037 3.32 2.04 41.30 2.34
3180 3362 8.482852 AATATATGGCCTTACTTTGCTCATTT 57.517 30.769 3.32 0.00 0.00 2.32
3190 3372 7.095940 CCTTACTTTGCTCATTTTGTGTGAATG 60.096 37.037 0.00 0.00 36.15 2.67
3204 3387 6.612247 TGTGTGAATGTTTACTGTTGTAGG 57.388 37.500 0.00 0.00 0.00 3.18
3237 3420 2.562738 AGAGCACATGCAGTACTGTGTA 59.437 45.455 23.44 11.26 43.66 2.90
3297 3480 4.889832 AGCACAAGTTTCAGAAGTCAAG 57.110 40.909 0.00 0.00 0.00 3.02
3333 3516 7.004086 TGGAAAACATTGAGAAGGTACATCTT 58.996 34.615 0.00 0.00 36.11 2.40
3385 3568 4.908601 TTGCAGGAAGTTTCTGATCCTA 57.091 40.909 15.81 0.00 41.63 2.94
3387 3570 4.836825 TGCAGGAAGTTTCTGATCCTAAG 58.163 43.478 15.81 0.00 41.63 2.18
3389 3572 4.633565 GCAGGAAGTTTCTGATCCTAAGTG 59.366 45.833 15.81 0.00 41.63 3.16
3397 3580 8.880991 AGTTTCTGATCCTAAGTGTACTTCTA 57.119 34.615 0.00 0.00 37.40 2.10
3417 3600 6.422776 TCTAAAATTCAGGTTCTTGATCGC 57.577 37.500 0.00 0.00 0.00 4.58
3500 3683 4.695217 TTGACACATTCTTTAATCCCGC 57.305 40.909 0.00 0.00 0.00 6.13
3501 3684 3.950397 TGACACATTCTTTAATCCCGCT 58.050 40.909 0.00 0.00 0.00 5.52
3502 3685 3.938963 TGACACATTCTTTAATCCCGCTC 59.061 43.478 0.00 0.00 0.00 5.03
3503 3686 3.279434 ACACATTCTTTAATCCCGCTCC 58.721 45.455 0.00 0.00 0.00 4.70
3504 3687 2.287915 CACATTCTTTAATCCCGCTCCG 59.712 50.000 0.00 0.00 0.00 4.63
3505 3688 1.264288 CATTCTTTAATCCCGCTCCGC 59.736 52.381 0.00 0.00 0.00 5.54
3506 3689 0.539986 TTCTTTAATCCCGCTCCGCT 59.460 50.000 0.00 0.00 0.00 5.52
3507 3690 0.104304 TCTTTAATCCCGCTCCGCTC 59.896 55.000 0.00 0.00 0.00 5.03
3508 3691 0.179084 CTTTAATCCCGCTCCGCTCA 60.179 55.000 0.00 0.00 0.00 4.26
3509 3692 0.461339 TTTAATCCCGCTCCGCTCAC 60.461 55.000 0.00 0.00 0.00 3.51
3510 3693 1.609635 TTAATCCCGCTCCGCTCACA 61.610 55.000 0.00 0.00 0.00 3.58
3511 3694 2.016393 TAATCCCGCTCCGCTCACAG 62.016 60.000 0.00 0.00 0.00 3.66
3514 3697 4.379243 CCGCTCCGCTCACAGGTT 62.379 66.667 0.00 0.00 0.00 3.50
3515 3698 2.357517 CGCTCCGCTCACAGGTTT 60.358 61.111 0.00 0.00 0.00 3.27
3516 3699 1.961277 CGCTCCGCTCACAGGTTTT 60.961 57.895 0.00 0.00 0.00 2.43
3517 3700 0.669318 CGCTCCGCTCACAGGTTTTA 60.669 55.000 0.00 0.00 0.00 1.52
3518 3701 1.519408 GCTCCGCTCACAGGTTTTAA 58.481 50.000 0.00 0.00 0.00 1.52
3519 3702 2.084546 GCTCCGCTCACAGGTTTTAAT 58.915 47.619 0.00 0.00 0.00 1.40
3520 3703 3.267483 GCTCCGCTCACAGGTTTTAATA 58.733 45.455 0.00 0.00 0.00 0.98
3521 3704 3.687698 GCTCCGCTCACAGGTTTTAATAA 59.312 43.478 0.00 0.00 0.00 1.40
3522 3705 4.335594 GCTCCGCTCACAGGTTTTAATAAT 59.664 41.667 0.00 0.00 0.00 1.28
3523 3706 5.163652 GCTCCGCTCACAGGTTTTAATAATT 60.164 40.000 0.00 0.00 0.00 1.40
3524 3707 6.189677 TCCGCTCACAGGTTTTAATAATTG 57.810 37.500 0.00 0.00 0.00 2.32
3525 3708 5.124776 TCCGCTCACAGGTTTTAATAATTGG 59.875 40.000 0.00 0.00 0.00 3.16
3526 3709 4.798387 CGCTCACAGGTTTTAATAATTGGC 59.202 41.667 0.00 0.00 0.00 4.52
3527 3710 5.621104 CGCTCACAGGTTTTAATAATTGGCA 60.621 40.000 0.00 0.00 0.00 4.92
3528 3711 5.576774 GCTCACAGGTTTTAATAATTGGCAC 59.423 40.000 0.00 0.00 0.00 5.01
3529 3712 6.656632 TCACAGGTTTTAATAATTGGCACA 57.343 33.333 0.00 0.00 0.00 4.57
3530 3713 7.238486 TCACAGGTTTTAATAATTGGCACAT 57.762 32.000 0.00 0.00 39.30 3.21
3531 3714 7.675062 TCACAGGTTTTAATAATTGGCACATT 58.325 30.769 0.00 0.00 39.30 2.71
3532 3715 7.816995 TCACAGGTTTTAATAATTGGCACATTC 59.183 33.333 0.00 0.00 39.30 2.67
3533 3716 7.818930 CACAGGTTTTAATAATTGGCACATTCT 59.181 33.333 0.00 0.00 39.30 2.40
3534 3717 8.374743 ACAGGTTTTAATAATTGGCACATTCTT 58.625 29.630 0.00 0.00 39.30 2.52
3535 3718 9.218440 CAGGTTTTAATAATTGGCACATTCTTT 57.782 29.630 0.00 0.00 39.30 2.52
3536 3719 9.791801 AGGTTTTAATAATTGGCACATTCTTTT 57.208 25.926 0.00 0.00 39.30 2.27
3572 3755 5.812286 ACTGGGTACTGTACTTTAATTGGG 58.188 41.667 16.79 2.05 0.00 4.12
3575 3758 6.240145 TGGGTACTGTACTTTAATTGGGTTC 58.760 40.000 16.79 0.00 0.00 3.62
3577 3760 6.165577 GGTACTGTACTTTAATTGGGTTCGA 58.834 40.000 16.79 0.00 0.00 3.71
3582 3765 6.239396 TGTACTTTAATTGGGTTCGATTCCA 58.761 36.000 8.95 6.36 0.00 3.53
3595 3778 6.039382 GGGTTCGATTCCAAGCTGTTATTATT 59.961 38.462 8.95 0.00 0.00 1.40
3686 3869 5.376625 AGGTCACAATTGAAGCAGTTAAGA 58.623 37.500 13.59 0.00 31.90 2.10
3687 3870 6.006449 AGGTCACAATTGAAGCAGTTAAGAT 58.994 36.000 13.59 0.00 31.90 2.40
3792 3979 6.019156 GTGCTCTTGATATGCTCAAACTACTC 60.019 42.308 0.00 0.00 43.20 2.59
3793 3980 6.045318 GCTCTTGATATGCTCAAACTACTCA 58.955 40.000 0.00 0.00 43.20 3.41
3814 4058 3.802685 CAGGCGTAACTGGCTAATACTTC 59.197 47.826 0.00 0.00 43.82 3.01
3818 4062 4.148348 GCGTAACTGGCTAATACTTCATCG 59.852 45.833 0.00 0.00 0.00 3.84
3821 4065 6.142480 CGTAACTGGCTAATACTTCATCGAAG 59.858 42.308 2.22 2.22 44.37 3.79
3830 4074 1.012841 CTTCATCGAAGAAGGCTGGC 58.987 55.000 20.06 0.00 43.58 4.85
3831 4075 0.615331 TTCATCGAAGAAGGCTGGCT 59.385 50.000 0.00 0.00 43.58 4.75
3832 4076 1.485124 TCATCGAAGAAGGCTGGCTA 58.515 50.000 3.41 0.00 43.58 3.93
3833 4077 1.410517 TCATCGAAGAAGGCTGGCTAG 59.589 52.381 3.41 0.00 43.58 3.42
3834 4078 1.137872 CATCGAAGAAGGCTGGCTAGT 59.862 52.381 3.41 0.00 43.58 2.57
3835 4079 2.139323 TCGAAGAAGGCTGGCTAGTA 57.861 50.000 3.41 0.00 0.00 1.82
3836 4080 1.749634 TCGAAGAAGGCTGGCTAGTAC 59.250 52.381 3.41 0.00 0.00 2.73
3837 4081 1.751924 CGAAGAAGGCTGGCTAGTACT 59.248 52.381 3.41 0.00 0.00 2.73
3838 4082 2.223618 CGAAGAAGGCTGGCTAGTACTC 60.224 54.545 3.41 0.00 0.00 2.59
3839 4083 1.783071 AGAAGGCTGGCTAGTACTCC 58.217 55.000 3.41 0.00 0.00 3.85
3840 4084 0.753867 GAAGGCTGGCTAGTACTCCC 59.246 60.000 3.41 1.65 0.00 4.30
3841 4085 0.340208 AAGGCTGGCTAGTACTCCCT 59.660 55.000 3.41 0.00 0.00 4.20
3842 4086 0.105913 AGGCTGGCTAGTACTCCCTC 60.106 60.000 0.13 0.00 0.00 4.30
3843 4087 0.105913 GGCTGGCTAGTACTCCCTCT 60.106 60.000 0.00 0.00 0.00 3.69
3844 4088 1.036707 GCTGGCTAGTACTCCCTCTG 58.963 60.000 0.00 0.00 0.00 3.35
3845 4089 1.686741 GCTGGCTAGTACTCCCTCTGT 60.687 57.143 0.00 0.00 0.00 3.41
3846 4090 2.303175 CTGGCTAGTACTCCCTCTGTC 58.697 57.143 0.00 0.00 0.00 3.51
3847 4091 1.063867 TGGCTAGTACTCCCTCTGTCC 60.064 57.143 0.00 0.00 0.00 4.02
3848 4092 1.694844 GCTAGTACTCCCTCTGTCCC 58.305 60.000 0.00 0.00 0.00 4.46
3849 4093 1.063867 GCTAGTACTCCCTCTGTCCCA 60.064 57.143 0.00 0.00 0.00 4.37
3850 4094 2.425102 GCTAGTACTCCCTCTGTCCCAT 60.425 54.545 0.00 0.00 0.00 4.00
3851 4095 3.181431 GCTAGTACTCCCTCTGTCCCATA 60.181 52.174 0.00 0.00 0.00 2.74
3852 4096 4.691935 GCTAGTACTCCCTCTGTCCCATAA 60.692 50.000 0.00 0.00 0.00 1.90
3853 4097 4.561254 AGTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
3854 4098 5.681494 AGTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
3855 4099 6.234404 AGTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
3856 4100 7.358255 AGTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
3857 4101 7.776745 AGTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
3858 4102 7.896496 AGTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
3859 4103 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
3860 4104 7.491681 ACTCCCTCTGTCCCATAATATAAGAT 58.508 38.462 0.00 0.00 0.00 2.40
3861 4105 7.401493 ACTCCCTCTGTCCCATAATATAAGATG 59.599 40.741 0.00 0.00 0.00 2.90
4208 4452 4.878878 CCCCCTAGCGCCTTAAAG 57.121 61.111 2.29 0.00 0.00 1.85
4209 4453 1.526225 CCCCCTAGCGCCTTAAAGC 60.526 63.158 2.29 0.00 0.00 3.51
4210 4454 1.223487 CCCCTAGCGCCTTAAAGCA 59.777 57.895 2.29 0.00 35.48 3.91
4211 4455 0.393808 CCCCTAGCGCCTTAAAGCAA 60.394 55.000 2.29 0.00 35.48 3.91
4212 4456 1.459450 CCCTAGCGCCTTAAAGCAAA 58.541 50.000 2.29 0.00 35.48 3.68
4213 4457 1.401905 CCCTAGCGCCTTAAAGCAAAG 59.598 52.381 2.29 0.00 35.48 2.77
4214 4458 1.202188 CCTAGCGCCTTAAAGCAAAGC 60.202 52.381 2.29 0.00 35.48 3.51
4215 4459 0.446222 TAGCGCCTTAAAGCAAAGCG 59.554 50.000 2.29 0.00 35.48 4.68
4216 4460 1.081442 GCGCCTTAAAGCAAAGCGT 60.081 52.632 0.00 0.00 32.39 5.07
4217 4461 1.065572 GCGCCTTAAAGCAAAGCGTC 61.066 55.000 0.00 0.00 32.39 5.19
4218 4462 0.789383 CGCCTTAAAGCAAAGCGTCG 60.789 55.000 0.00 0.00 0.00 5.12
4219 4463 1.065572 GCCTTAAAGCAAAGCGTCGC 61.066 55.000 9.80 9.80 0.00 5.19
4220 4464 0.454452 CCTTAAAGCAAAGCGTCGCC 60.454 55.000 14.86 0.00 0.00 5.54
4221 4465 0.517316 CTTAAAGCAAAGCGTCGCCT 59.483 50.000 14.86 0.00 0.00 5.52
4222 4466 0.948678 TTAAAGCAAAGCGTCGCCTT 59.051 45.000 14.86 3.97 0.00 4.35
4223 4467 1.798283 TAAAGCAAAGCGTCGCCTTA 58.202 45.000 14.86 0.00 0.00 2.69
4224 4468 0.948678 AAAGCAAAGCGTCGCCTTAA 59.051 45.000 14.86 0.00 0.00 1.85
4225 4469 0.948678 AAGCAAAGCGTCGCCTTAAA 59.051 45.000 14.86 0.00 0.00 1.52
4226 4470 0.948678 AGCAAAGCGTCGCCTTAAAA 59.051 45.000 14.86 0.00 0.00 1.52
4227 4471 1.335496 AGCAAAGCGTCGCCTTAAAAA 59.665 42.857 14.86 0.00 0.00 1.94
4228 4472 1.450533 GCAAAGCGTCGCCTTAAAAAC 59.549 47.619 14.86 0.00 0.00 2.43
4229 4473 2.722071 CAAAGCGTCGCCTTAAAAACA 58.278 42.857 14.86 0.00 0.00 2.83
4230 4474 3.305110 CAAAGCGTCGCCTTAAAAACAT 58.695 40.909 14.86 0.00 0.00 2.71
4231 4475 4.468643 CAAAGCGTCGCCTTAAAAACATA 58.531 39.130 14.86 0.00 0.00 2.29
4232 4476 4.336532 AAGCGTCGCCTTAAAAACATAG 57.663 40.909 14.86 0.00 0.00 2.23
4233 4477 2.676342 AGCGTCGCCTTAAAAACATAGG 59.324 45.455 14.86 0.00 0.00 2.57
4234 4478 2.417586 GCGTCGCCTTAAAAACATAGGT 59.582 45.455 5.75 0.00 0.00 3.08
4235 4479 3.120095 GCGTCGCCTTAAAAACATAGGTT 60.120 43.478 5.75 0.00 39.43 3.50
4236 4480 4.093261 GCGTCGCCTTAAAAACATAGGTTA 59.907 41.667 5.75 0.00 35.82 2.85
4237 4481 5.220719 GCGTCGCCTTAAAAACATAGGTTAT 60.221 40.000 5.75 0.00 35.82 1.89
4238 4482 6.676213 GCGTCGCCTTAAAAACATAGGTTATT 60.676 38.462 5.75 0.00 35.82 1.40
4239 4483 7.465781 GCGTCGCCTTAAAAACATAGGTTATTA 60.466 37.037 5.75 0.00 35.82 0.98
4240 4484 7.847564 CGTCGCCTTAAAAACATAGGTTATTAC 59.152 37.037 0.00 0.00 35.82 1.89
4241 4485 8.667463 GTCGCCTTAAAAACATAGGTTATTACA 58.333 33.333 0.00 0.00 35.82 2.41
4242 4486 9.398538 TCGCCTTAAAAACATAGGTTATTACAT 57.601 29.630 0.00 0.00 35.82 2.29
4243 4487 9.659830 CGCCTTAAAAACATAGGTTATTACATC 57.340 33.333 0.00 0.00 35.82 3.06
4244 4488 9.961265 GCCTTAAAAACATAGGTTATTACATCC 57.039 33.333 0.00 0.00 35.82 3.51
4257 4501 7.872993 AGGTTATTACATCCAATATGTGAGACG 59.127 37.037 0.97 0.00 33.76 4.18
4258 4502 7.117812 GGTTATTACATCCAATATGTGAGACGG 59.882 40.741 0.97 0.00 33.76 4.79
4259 4503 5.862678 TTACATCCAATATGTGAGACGGA 57.137 39.130 0.97 0.00 33.76 4.69
4260 4504 4.327982 ACATCCAATATGTGAGACGGAG 57.672 45.455 0.00 0.00 0.00 4.63
4261 4505 3.070159 ACATCCAATATGTGAGACGGAGG 59.930 47.826 0.00 0.00 0.00 4.30
4262 4506 2.039418 TCCAATATGTGAGACGGAGGG 58.961 52.381 0.00 0.00 0.00 4.30
4263 4507 2.039418 CCAATATGTGAGACGGAGGGA 58.961 52.381 0.00 0.00 0.00 4.20
4264 4508 2.036475 CCAATATGTGAGACGGAGGGAG 59.964 54.545 0.00 0.00 0.00 4.30
4279 4523 4.021894 CGGAGGGAGTACTTCTTATGGATG 60.022 50.000 0.01 0.00 0.00 3.51
4313 4557 8.996651 CCTCCCTAGGTTATATCAAAAATTGT 57.003 34.615 8.29 0.00 38.19 2.71
4337 4585 7.565398 TGTTTTCTCCTATAGCTGATAAGGACT 59.435 37.037 0.00 0.00 0.00 3.85
4357 4605 8.738645 AGGACTTTAAGGTGATTGAATATGTC 57.261 34.615 0.00 0.00 0.00 3.06
4358 4606 8.328758 AGGACTTTAAGGTGATTGAATATGTCA 58.671 33.333 0.00 0.00 0.00 3.58
4359 4607 9.125026 GGACTTTAAGGTGATTGAATATGTCAT 57.875 33.333 0.00 0.00 35.70 3.06
4364 4612 7.814264 AAGGTGATTGAATATGTCATCTTCC 57.186 36.000 8.11 0.00 38.57 3.46
4365 4613 7.146715 AGGTGATTGAATATGTCATCTTCCT 57.853 36.000 8.11 0.00 35.70 3.36
4366 4614 6.996879 AGGTGATTGAATATGTCATCTTCCTG 59.003 38.462 8.11 0.00 35.70 3.86
4367 4615 6.769822 GGTGATTGAATATGTCATCTTCCTGT 59.230 38.462 8.11 0.00 35.70 4.00
4368 4616 7.933577 GGTGATTGAATATGTCATCTTCCTGTA 59.066 37.037 8.11 0.00 35.70 2.74
4369 4617 9.330063 GTGATTGAATATGTCATCTTCCTGTAA 57.670 33.333 8.11 0.00 35.70 2.41
4373 4621 8.908786 TGAATATGTCATCTTCCTGTAATTCC 57.091 34.615 8.11 0.00 0.00 3.01
4374 4622 8.717717 TGAATATGTCATCTTCCTGTAATTCCT 58.282 33.333 8.11 0.00 0.00 3.36
4377 4625 7.682787 ATGTCATCTTCCTGTAATTCCTACT 57.317 36.000 0.00 0.00 0.00 2.57
4378 4626 7.496346 TGTCATCTTCCTGTAATTCCTACTT 57.504 36.000 0.00 0.00 0.00 2.24
4379 4627 7.556844 TGTCATCTTCCTGTAATTCCTACTTC 58.443 38.462 0.00 0.00 0.00 3.01
4380 4628 6.987404 GTCATCTTCCTGTAATTCCTACTTCC 59.013 42.308 0.00 0.00 0.00 3.46
4381 4629 5.593679 TCTTCCTGTAATTCCTACTTCCG 57.406 43.478 0.00 0.00 0.00 4.30
4382 4630 5.021458 TCTTCCTGTAATTCCTACTTCCGT 58.979 41.667 0.00 0.00 0.00 4.69
4391 4639 2.600790 TCCTACTTCCGTTGGTGAGAA 58.399 47.619 0.00 0.00 37.33 2.87
4394 4642 2.240493 ACTTCCGTTGGTGAGAACAG 57.760 50.000 0.00 0.00 0.00 3.16
4395 4643 1.485066 ACTTCCGTTGGTGAGAACAGT 59.515 47.619 0.00 0.00 0.00 3.55
4416 4664 8.025243 ACAGTTACATATTTGTTCAGGTAACG 57.975 34.615 0.00 0.00 43.08 3.18
4418 4666 8.500773 CAGTTACATATTTGTTCAGGTAACGTT 58.499 33.333 5.88 5.88 43.08 3.99
4420 4668 6.249035 ACATATTTGTTCAGGTAACGTTGG 57.751 37.500 11.99 0.00 41.30 3.77
4423 4671 7.825270 ACATATTTGTTCAGGTAACGTTGGATA 59.175 33.333 11.99 0.00 41.30 2.59
4425 4673 4.196626 TGTTCAGGTAACGTTGGATAGG 57.803 45.455 11.99 0.00 41.30 2.57
4426 4674 3.833650 TGTTCAGGTAACGTTGGATAGGA 59.166 43.478 11.99 0.00 41.30 2.94
4427 4675 4.468510 TGTTCAGGTAACGTTGGATAGGAT 59.531 41.667 11.99 0.00 41.30 3.24
4429 4677 5.687166 TCAGGTAACGTTGGATAGGATTT 57.313 39.130 11.99 0.00 46.39 2.17
4433 4681 8.926374 TCAGGTAACGTTGGATAGGATTTATTA 58.074 33.333 11.99 0.00 46.39 0.98
4434 4682 8.985805 CAGGTAACGTTGGATAGGATTTATTAC 58.014 37.037 11.99 0.00 46.39 1.89
4462 4713 7.408756 TGGAGCATTAATTATTTCTGCTGTT 57.591 32.000 15.36 0.00 42.87 3.16
4463 4714 8.518430 TGGAGCATTAATTATTTCTGCTGTTA 57.482 30.769 15.36 3.29 42.87 2.41
4480 4731 8.298854 TCTGCTGTTACGATAAGTTAACTGTTA 58.701 33.333 9.34 0.00 0.00 2.41
4509 4760 9.457436 TTTCCTCTACAAGAGTTTTAAGTGTTT 57.543 29.630 3.42 0.00 40.72 2.83
4520 4771 8.352942 AGAGTTTTAAGTGTTTTCCTGCTATTG 58.647 33.333 0.00 0.00 0.00 1.90
4525 4776 5.165961 AGTGTTTTCCTGCTATTGCTCTA 57.834 39.130 0.00 0.00 40.48 2.43
4535 4786 6.043127 TCCTGCTATTGCTCTAATGGTAATGA 59.957 38.462 0.00 0.00 40.48 2.57
4556 4807 6.867519 TGACCAGTTATATCTCCAAGTTGA 57.132 37.500 3.87 0.00 0.00 3.18
4557 4808 7.437713 TGACCAGTTATATCTCCAAGTTGAT 57.562 36.000 3.87 0.00 0.00 2.57
4559 4810 7.092891 TGACCAGTTATATCTCCAAGTTGATGT 60.093 37.037 3.87 0.00 0.00 3.06
4560 4811 7.050377 ACCAGTTATATCTCCAAGTTGATGTG 58.950 38.462 3.87 0.00 0.00 3.21
4561 4812 7.050377 CCAGTTATATCTCCAAGTTGATGTGT 58.950 38.462 3.87 0.00 0.00 3.72
4566 4817 5.954296 ATCTCCAAGTTGATGTGTTCTTG 57.046 39.130 3.87 0.00 37.57 3.02
4574 4825 6.808008 AGTTGATGTGTTCTTGTGATAAGG 57.192 37.500 0.00 0.00 0.00 2.69
4587 4838 4.304110 TGTGATAAGGAGACACAAACGAC 58.696 43.478 0.00 0.00 40.72 4.34
4589 4840 3.322541 TGATAAGGAGACACAAACGACCA 59.677 43.478 0.00 0.00 0.00 4.02
4590 4841 2.930826 AAGGAGACACAAACGACCAT 57.069 45.000 0.00 0.00 0.00 3.55
4595 4847 4.000988 GGAGACACAAACGACCATAATGT 58.999 43.478 0.00 0.00 0.00 2.71
4605 4857 8.073768 ACAAACGACCATAATGTTGTTCTTAAG 58.926 33.333 0.00 0.00 41.03 1.85
4606 4858 6.178239 ACGACCATAATGTTGTTCTTAAGC 57.822 37.500 0.00 0.00 28.10 3.09
4612 4864 3.942130 ATGTTGTTCTTAAGCTTGGGC 57.058 42.857 9.86 0.00 39.06 5.36
4617 4869 3.495331 TGTTCTTAAGCTTGGGCATCAA 58.505 40.909 9.86 0.00 41.70 2.57
4622 4874 6.112927 TCTTAAGCTTGGGCATCAAAATTT 57.887 33.333 9.86 0.00 41.70 1.82
4623 4875 5.933463 TCTTAAGCTTGGGCATCAAAATTTG 59.067 36.000 9.86 0.00 41.70 2.32
4624 4876 4.354893 AAGCTTGGGCATCAAAATTTGA 57.645 36.364 11.10 11.10 41.70 2.69
4654 4906 3.776969 AGTTGATGTTCTCCTGGCTGATA 59.223 43.478 0.00 0.00 0.00 2.15
4657 4909 3.519107 TGATGTTCTCCTGGCTGATACAA 59.481 43.478 0.00 0.00 0.00 2.41
4658 4910 3.334583 TGTTCTCCTGGCTGATACAAC 57.665 47.619 0.00 0.00 0.00 3.32
4659 4911 2.271800 GTTCTCCTGGCTGATACAACG 58.728 52.381 0.00 0.00 0.00 4.10
4660 4912 0.175760 TCTCCTGGCTGATACAACGC 59.824 55.000 0.00 0.00 0.00 4.84
4661 4913 0.811616 CTCCTGGCTGATACAACGCC 60.812 60.000 0.00 0.00 44.02 5.68
4663 4915 2.813179 CTGGCTGATACAACGCCGC 61.813 63.158 0.00 0.00 46.67 6.53
4664 4916 3.573491 GGCTGATACAACGCCGCC 61.573 66.667 0.00 0.00 33.64 6.13
4672 4924 0.179094 TACAACGCCGCCCATCTTAG 60.179 55.000 0.00 0.00 0.00 2.18
4681 4933 0.475906 GCCCATCTTAGCATCCTGGT 59.524 55.000 0.00 0.00 0.00 4.00
4684 4936 2.441001 CCCATCTTAGCATCCTGGTCTT 59.559 50.000 0.00 0.00 0.00 3.01
4708 4962 1.737735 GGCGAGCCAAAACATTGCC 60.738 57.895 9.58 0.00 36.37 4.52
4711 4965 1.468054 GCGAGCCAAAACATTGCCTAG 60.468 52.381 0.00 0.00 0.00 3.02
4718 4972 4.549458 CCAAAACATTGCCTAGTGTTGAG 58.451 43.478 0.00 0.00 38.47 3.02
4719 4973 3.923017 AAACATTGCCTAGTGTTGAGC 57.077 42.857 0.00 0.00 38.47 4.26
4723 4977 3.891366 ACATTGCCTAGTGTTGAGCTTTT 59.109 39.130 0.00 0.00 0.00 2.27
4726 4980 1.541588 GCCTAGTGTTGAGCTTTTGGG 59.458 52.381 0.00 0.00 0.00 4.12
4727 4981 2.863809 CCTAGTGTTGAGCTTTTGGGT 58.136 47.619 0.00 0.00 0.00 4.51
4728 4982 3.809324 GCCTAGTGTTGAGCTTTTGGGTA 60.809 47.826 0.00 0.00 0.00 3.69
4730 4984 5.010282 CCTAGTGTTGAGCTTTTGGGTATT 58.990 41.667 0.00 0.00 0.00 1.89
4731 4985 5.476945 CCTAGTGTTGAGCTTTTGGGTATTT 59.523 40.000 0.00 0.00 0.00 1.40
4793 5047 9.800433 TCATAAAGTTTGCATAAACATACCATG 57.200 29.630 4.19 0.00 46.76 3.66
4801 5055 5.478332 TGCATAAACATACCATGTGTTTCCA 59.522 36.000 14.20 9.06 44.10 3.53
4811 5065 5.723295 ACCATGTGTTTCCAATTATGCTTC 58.277 37.500 0.00 0.00 0.00 3.86
4812 5066 5.245751 ACCATGTGTTTCCAATTATGCTTCA 59.754 36.000 0.00 0.00 0.00 3.02
4835 5089 4.586001 AGTTGGATGTCTGAAACAGCAATT 59.414 37.500 0.00 0.00 46.29 2.32
4836 5090 4.508461 TGGATGTCTGAAACAGCAATTG 57.492 40.909 0.00 0.00 46.29 2.32
4865 5119 7.035004 TCTAAGATTTTTAATGGTGTGCATGC 58.965 34.615 11.82 11.82 0.00 4.06
4948 5202 6.989659 ACAAAACATGAAGATCAAGCTGATT 58.010 32.000 0.00 0.00 37.20 2.57
5002 5256 0.908910 TAATCCTGTCGGTGTGCCAT 59.091 50.000 0.00 0.00 34.09 4.40
5005 5259 2.747460 CTGTCGGTGTGCCATGGG 60.747 66.667 15.13 0.00 34.09 4.00
5014 5268 0.106268 TGTGCCATGGGTTCAACTGT 60.106 50.000 15.13 0.00 0.00 3.55
5021 5275 0.033601 TGGGTTCAACTGTGGCAAGT 60.034 50.000 0.00 0.00 0.00 3.16
5022 5276 0.668535 GGGTTCAACTGTGGCAAGTC 59.331 55.000 0.00 0.00 0.00 3.01
5023 5277 0.668535 GGTTCAACTGTGGCAAGTCC 59.331 55.000 0.00 0.00 0.00 3.85
5063 5317 3.452755 TCGTGAGACACATTCAACTGT 57.547 42.857 0.00 0.00 33.40 3.55
5066 5320 3.733337 GTGAGACACATTCAACTGTCCT 58.267 45.455 0.00 0.00 38.04 3.85
5101 5357 6.558771 TGATTCGAGCAAAACCCATATATG 57.441 37.500 5.68 5.68 0.00 1.78
5102 5358 9.637084 GCTGATTCGAGCAAAACCCATATATGG 62.637 44.444 22.97 22.97 42.02 2.74
5103 5359 4.431416 TCGAGCAAAACCCATATATGGT 57.569 40.909 26.59 14.22 46.65 3.55
5105 5361 3.304659 CGAGCAAAACCCATATATGGTGC 60.305 47.826 26.41 26.41 46.65 5.01
5106 5362 3.914771 AGCAAAACCCATATATGGTGCT 58.085 40.909 28.95 28.95 45.86 4.40
5107 5363 4.670896 GCAAAACCCATATATGGTGCTT 57.329 40.909 26.42 16.48 46.65 3.91
5108 5364 5.782893 GCAAAACCCATATATGGTGCTTA 57.217 39.130 26.42 0.00 46.65 3.09
5109 5365 5.772521 GCAAAACCCATATATGGTGCTTAG 58.227 41.667 26.42 15.99 46.65 2.18
5110 5366 5.301805 GCAAAACCCATATATGGTGCTTAGT 59.698 40.000 26.42 16.50 46.65 2.24
5121 5378 5.948992 ATGGTGCTTAGTGTTCTTTCTTC 57.051 39.130 0.00 0.00 0.00 2.87
5198 5455 1.495951 GTCGTGTTGGGATGTTCGC 59.504 57.895 0.00 0.00 0.00 4.70
5206 5463 2.178235 GGGATGTTCGCTTACCGCC 61.178 63.158 0.00 0.00 36.73 6.13
5277 5534 7.360113 TGTATGTATAGCTTGGATCTTGACA 57.640 36.000 0.00 0.00 0.00 3.58
5278 5535 7.966812 TGTATGTATAGCTTGGATCTTGACAT 58.033 34.615 0.00 0.00 0.00 3.06
5349 5606 4.771114 ATTGGAGTCGGAATTATGTGGA 57.229 40.909 0.00 0.00 0.00 4.02
5359 5616 4.202441 GGAATTATGTGGATGTGTCTGCT 58.798 43.478 0.00 0.00 0.00 4.24
5366 5623 1.421268 TGGATGTGTCTGCTTTGGTCT 59.579 47.619 0.00 0.00 0.00 3.85
5414 5671 0.946221 GTCTGACCACGACAAGCCTG 60.946 60.000 0.00 0.00 0.00 4.85
5417 5674 4.643387 ACCACGACAAGCCTGGCC 62.643 66.667 16.57 0.00 0.00 5.36
5428 5685 1.750780 GCCTGGCCTTGGCTTCTAC 60.751 63.158 26.09 3.60 46.38 2.59
5453 5710 0.950116 GGCCAGTTGCTCTCATATGC 59.050 55.000 0.00 0.00 40.92 3.14
5473 5730 0.654472 CGTGTCACTTTCGTTGCTGC 60.654 55.000 0.65 0.00 0.00 5.25
5475 5732 0.808060 TGTCACTTTCGTTGCTGCGA 60.808 50.000 0.00 0.00 39.28 5.10
5481 5738 0.318022 TTTCGTTGCTGCGACGTAGA 60.318 50.000 33.84 21.52 41.46 2.59
5483 5740 0.796870 TCGTTGCTGCGACGTAGATG 60.797 55.000 33.84 12.12 41.46 2.90
5515 5772 2.360350 CTGCTGCATTCACCCGGT 60.360 61.111 1.31 0.00 0.00 5.28
5524 5781 2.353208 GCATTCACCCGGTTTATTTGCA 60.353 45.455 0.00 0.00 0.00 4.08
5530 5787 3.130340 CACCCGGTTTATTTGCATAGCTT 59.870 43.478 0.00 0.00 0.00 3.74
5532 5789 3.490761 CCCGGTTTATTTGCATAGCTTGG 60.491 47.826 0.00 0.00 0.00 3.61
5534 5791 3.490761 CGGTTTATTTGCATAGCTTGGGG 60.491 47.826 0.00 0.00 0.00 4.96
5546 5803 1.777272 AGCTTGGGGTCATATCCCTTC 59.223 52.381 0.00 0.00 46.27 3.46
5582 5840 2.191400 AGAGGCCAGTCTGATAGCAAA 58.809 47.619 5.01 0.00 0.00 3.68
5583 5841 2.776536 AGAGGCCAGTCTGATAGCAAAT 59.223 45.455 5.01 0.00 0.00 2.32
5584 5842 2.877168 GAGGCCAGTCTGATAGCAAATG 59.123 50.000 5.01 0.00 0.00 2.32
5585 5843 2.240667 AGGCCAGTCTGATAGCAAATGT 59.759 45.455 5.01 0.00 0.00 2.71
5586 5844 3.455910 AGGCCAGTCTGATAGCAAATGTA 59.544 43.478 5.01 0.00 0.00 2.29
5630 6562 0.388649 GGAGGGATATGCGTACGCTG 60.389 60.000 36.99 1.41 42.51 5.18
5653 6585 4.961511 GCGTGGGACGACTGTGCA 62.962 66.667 0.00 0.00 46.05 4.57
5702 6634 1.728971 CTTCAGCACGGAGAACATGAC 59.271 52.381 0.00 0.00 0.00 3.06
5715 6698 5.163814 GGAGAACATGACTGCACAATACTTC 60.164 44.000 0.00 0.00 0.00 3.01
5716 6699 4.389992 AGAACATGACTGCACAATACTTCG 59.610 41.667 0.00 0.00 0.00 3.79
5717 6700 3.002791 ACATGACTGCACAATACTTCGG 58.997 45.455 0.00 0.00 0.00 4.30
5719 6702 3.120321 TGACTGCACAATACTTCGGTT 57.880 42.857 0.00 0.00 0.00 4.44
5735 6720 6.103330 ACTTCGGTTTTACTGTTGCATTTTT 58.897 32.000 0.00 0.00 0.00 1.94
5759 6744 1.683917 CCCTGTAGCCTACTGTAGCAG 59.316 57.143 9.35 10.41 37.52 4.24
5760 6745 1.067821 CCTGTAGCCTACTGTAGCAGC 59.932 57.143 9.35 8.41 34.37 5.25
5761 6746 1.067821 CTGTAGCCTACTGTAGCAGCC 59.932 57.143 9.35 0.00 34.37 4.85
5762 6747 1.342076 TGTAGCCTACTGTAGCAGCCT 60.342 52.381 9.35 5.34 34.37 4.58
5763 6748 1.067821 GTAGCCTACTGTAGCAGCCTG 59.932 57.143 9.35 0.00 34.37 4.85
5764 6749 1.144936 GCCTACTGTAGCAGCCTGG 59.855 63.158 9.35 0.00 34.37 4.45
5766 6751 1.690219 CCTACTGTAGCAGCCTGGGG 61.690 65.000 9.35 0.00 34.37 4.96
5799 6797 3.338250 AATCCAAGCTCCGCCCCA 61.338 61.111 0.00 0.00 0.00 4.96
5826 6826 0.590195 GCAAGCACGGGATGATCATC 59.410 55.000 24.90 24.90 37.11 2.92
5827 6827 1.957668 CAAGCACGGGATGATCATCA 58.042 50.000 31.49 0.00 39.54 3.07
5860 6860 2.942376 CTGCGGCATCTTGGTTTATACA 59.058 45.455 1.75 0.00 0.00 2.29
5873 6873 8.664798 TCTTGGTTTATACATCATGTTTCTTCG 58.335 33.333 0.00 0.00 0.00 3.79
5874 6874 8.554835 TTGGTTTATACATCATGTTTCTTCGA 57.445 30.769 0.00 0.00 0.00 3.71
5880 6880 9.559732 TTATACATCATGTTTCTTCGATGGATT 57.440 29.630 0.00 0.00 39.56 3.01
5902 6902 7.600375 GGATTCGACAGAAATGATAGCTATTCA 59.400 37.037 7.87 7.88 40.15 2.57
5903 6903 7.936950 TTCGACAGAAATGATAGCTATTCAG 57.063 36.000 7.87 1.90 32.65 3.02
5920 6920 9.153479 AGCTATTCAGAATGGATTCTACTTACT 57.847 33.333 10.60 0.00 44.84 2.24
5935 6935 8.991783 TTCTACTTACTAGCTAAGATTGGCTA 57.008 34.615 9.84 9.84 43.57 3.93
5948 6948 7.095439 GCTAAGATTGGCTATAGCAGTTTACAG 60.095 40.741 25.53 14.76 44.36 2.74
5952 6952 8.651389 AGATTGGCTATAGCAGTTTACAGATTA 58.349 33.333 25.53 0.00 44.36 1.75
5955 6955 8.433421 TGGCTATAGCAGTTTACAGATTAAAC 57.567 34.615 25.53 3.21 44.36 2.01
5987 6987 1.797025 ACGCAGTTGAGGCTCTAAAC 58.203 50.000 16.72 12.46 37.78 2.01
5989 6989 1.338200 CGCAGTTGAGGCTCTAAACCT 60.338 52.381 16.72 0.00 41.41 3.50
5997 7003 6.039829 AGTTGAGGCTCTAAACCTTTTTCTTG 59.960 38.462 16.72 0.00 37.77 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 108 2.072298 CTAGAAGCTTGTGTGAGGTGC 58.928 52.381 2.10 0.00 0.00 5.01
109 112 4.381079 GGGAGTACTAGAAGCTTGTGTGAG 60.381 50.000 2.10 0.00 0.00 3.51
110 113 3.510360 GGGAGTACTAGAAGCTTGTGTGA 59.490 47.826 2.10 0.00 0.00 3.58
122 125 5.911378 AAAGTAAACGGAGGGAGTACTAG 57.089 43.478 0.00 0.00 0.00 2.57
124 127 4.346127 ACAAAAGTAAACGGAGGGAGTACT 59.654 41.667 0.00 0.00 0.00 2.73
125 128 4.635223 ACAAAAGTAAACGGAGGGAGTAC 58.365 43.478 0.00 0.00 0.00 2.73
126 129 4.961438 ACAAAAGTAAACGGAGGGAGTA 57.039 40.909 0.00 0.00 0.00 2.59
127 130 3.851458 ACAAAAGTAAACGGAGGGAGT 57.149 42.857 0.00 0.00 0.00 3.85
128 131 5.303165 ACTTACAAAAGTAAACGGAGGGAG 58.697 41.667 0.00 0.00 44.26 4.30
129 132 5.294734 ACTTACAAAAGTAAACGGAGGGA 57.705 39.130 0.00 0.00 44.26 4.20
130 133 4.151157 CGACTTACAAAAGTAAACGGAGGG 59.849 45.833 0.00 0.00 46.09 4.30
131 134 4.746611 ACGACTTACAAAAGTAAACGGAGG 59.253 41.667 14.18 0.00 46.09 4.30
132 135 5.895216 ACGACTTACAAAAGTAAACGGAG 57.105 39.130 14.18 0.00 46.09 4.63
133 136 6.312426 TGAAACGACTTACAAAAGTAAACGGA 59.688 34.615 14.18 0.76 46.09 4.69
134 137 6.476896 TGAAACGACTTACAAAAGTAAACGG 58.523 36.000 14.18 0.00 46.09 4.44
135 138 7.369026 GTCTGAAACGACTTACAAAAGTAAACG 59.631 37.037 0.00 0.00 46.09 3.60
136 139 8.170553 TGTCTGAAACGACTTACAAAAGTAAAC 58.829 33.333 0.00 0.00 46.09 2.01
137 140 8.254178 TGTCTGAAACGACTTACAAAAGTAAA 57.746 30.769 0.00 0.00 46.09 2.01
138 141 7.830940 TGTCTGAAACGACTTACAAAAGTAA 57.169 32.000 0.00 0.00 46.09 2.24
139 142 7.830940 TTGTCTGAAACGACTTACAAAAGTA 57.169 32.000 0.00 0.00 46.09 2.24
141 144 7.908082 TGAATTGTCTGAAACGACTTACAAAAG 59.092 33.333 0.00 0.00 38.77 2.27
142 145 7.753659 TGAATTGTCTGAAACGACTTACAAAA 58.246 30.769 0.00 0.00 35.00 2.44
143 146 7.310072 TGAATTGTCTGAAACGACTTACAAA 57.690 32.000 0.00 0.00 35.00 2.83
144 147 6.912203 TGAATTGTCTGAAACGACTTACAA 57.088 33.333 0.00 0.00 35.00 2.41
145 148 6.912203 TTGAATTGTCTGAAACGACTTACA 57.088 33.333 0.00 0.00 35.00 2.41
146 149 8.782533 ATTTTGAATTGTCTGAAACGACTTAC 57.217 30.769 0.00 0.00 35.00 2.34
148 151 8.076178 CCTATTTTGAATTGTCTGAAACGACTT 58.924 33.333 0.00 0.00 35.00 3.01
149 152 7.584987 CCTATTTTGAATTGTCTGAAACGACT 58.415 34.615 0.00 0.00 35.00 4.18
150 153 6.305638 GCCTATTTTGAATTGTCTGAAACGAC 59.694 38.462 0.00 0.00 34.52 4.34
151 154 6.206634 AGCCTATTTTGAATTGTCTGAAACGA 59.793 34.615 0.00 0.00 0.00 3.85
152 155 6.306356 CAGCCTATTTTGAATTGTCTGAAACG 59.694 38.462 0.00 0.00 0.00 3.60
153 156 7.147976 ACAGCCTATTTTGAATTGTCTGAAAC 58.852 34.615 1.46 0.00 0.00 2.78
154 157 7.288810 ACAGCCTATTTTGAATTGTCTGAAA 57.711 32.000 1.46 0.00 0.00 2.69
155 158 6.899393 ACAGCCTATTTTGAATTGTCTGAA 57.101 33.333 1.46 0.00 0.00 3.02
156 159 6.899393 AACAGCCTATTTTGAATTGTCTGA 57.101 33.333 1.46 0.00 0.00 3.27
157 160 7.951530 AAAACAGCCTATTTTGAATTGTCTG 57.048 32.000 0.00 0.00 0.00 3.51
158 161 8.637986 TGTAAAACAGCCTATTTTGAATTGTCT 58.362 29.630 0.00 0.00 31.79 3.41
159 162 8.699749 GTGTAAAACAGCCTATTTTGAATTGTC 58.300 33.333 0.00 0.00 31.79 3.18
160 163 8.200792 TGTGTAAAACAGCCTATTTTGAATTGT 58.799 29.630 0.00 0.00 33.78 2.71
161 164 8.586570 TGTGTAAAACAGCCTATTTTGAATTG 57.413 30.769 0.00 0.00 33.78 2.32
162 165 9.777297 AATGTGTAAAACAGCCTATTTTGAATT 57.223 25.926 0.00 0.00 43.64 2.17
163 166 9.206870 CAATGTGTAAAACAGCCTATTTTGAAT 57.793 29.630 0.00 0.00 43.64 2.57
164 167 8.200792 ACAATGTGTAAAACAGCCTATTTTGAA 58.799 29.630 0.00 0.00 43.64 2.69
165 168 7.721402 ACAATGTGTAAAACAGCCTATTTTGA 58.279 30.769 0.00 0.00 43.64 2.69
166 169 7.867403 AGACAATGTGTAAAACAGCCTATTTTG 59.133 33.333 0.00 0.00 43.64 2.44
167 170 7.867403 CAGACAATGTGTAAAACAGCCTATTTT 59.133 33.333 0.00 0.00 43.64 1.82
168 171 7.230510 TCAGACAATGTGTAAAACAGCCTATTT 59.769 33.333 0.00 0.00 43.64 1.40
169 172 6.714810 TCAGACAATGTGTAAAACAGCCTATT 59.285 34.615 0.00 0.00 43.64 1.73
170 173 6.237901 TCAGACAATGTGTAAAACAGCCTAT 58.762 36.000 0.00 0.00 43.64 2.57
171 174 5.616270 TCAGACAATGTGTAAAACAGCCTA 58.384 37.500 0.00 0.00 43.64 3.93
172 175 4.460263 TCAGACAATGTGTAAAACAGCCT 58.540 39.130 0.00 0.00 43.64 4.58
173 176 4.829064 TCAGACAATGTGTAAAACAGCC 57.171 40.909 0.00 0.00 43.64 4.85
174 177 6.697019 ACATTTCAGACAATGTGTAAAACAGC 59.303 34.615 0.00 0.00 44.19 4.40
175 178 8.131100 AGACATTTCAGACAATGTGTAAAACAG 58.869 33.333 12.82 0.00 45.55 3.16
176 179 7.995289 AGACATTTCAGACAATGTGTAAAACA 58.005 30.769 12.82 0.00 45.55 2.83
177 180 8.856490 AAGACATTTCAGACAATGTGTAAAAC 57.144 30.769 12.82 2.36 45.55 2.43
178 181 8.681806 TGAAGACATTTCAGACAATGTGTAAAA 58.318 29.630 12.82 0.00 45.55 1.52
179 182 8.219546 TGAAGACATTTCAGACAATGTGTAAA 57.780 30.769 12.82 0.00 45.55 2.01
180 183 7.800155 TGAAGACATTTCAGACAATGTGTAA 57.200 32.000 12.82 3.20 45.55 2.41
181 184 7.041167 CCTTGAAGACATTTCAGACAATGTGTA 60.041 37.037 12.82 0.00 45.55 2.90
182 185 6.238842 CCTTGAAGACATTTCAGACAATGTGT 60.239 38.462 12.82 8.23 45.55 3.72
183 186 6.147581 CCTTGAAGACATTTCAGACAATGTG 58.852 40.000 12.82 2.31 45.55 3.21
185 188 6.206243 AGACCTTGAAGACATTTCAGACAATG 59.794 38.462 0.00 0.00 39.67 2.82
186 189 6.302269 AGACCTTGAAGACATTTCAGACAAT 58.698 36.000 0.00 0.00 0.00 2.71
187 190 5.684704 AGACCTTGAAGACATTTCAGACAA 58.315 37.500 0.00 0.00 0.00 3.18
188 191 5.296151 AGACCTTGAAGACATTTCAGACA 57.704 39.130 0.00 0.00 0.00 3.41
189 192 7.913674 ATAAGACCTTGAAGACATTTCAGAC 57.086 36.000 0.00 0.00 0.00 3.51
195 198 9.793259 TCACTTTTATAAGACCTTGAAGACATT 57.207 29.630 0.00 0.00 35.30 2.71
196 199 9.793259 TTCACTTTTATAAGACCTTGAAGACAT 57.207 29.630 0.00 0.00 35.30 3.06
197 200 9.052759 GTTCACTTTTATAAGACCTTGAAGACA 57.947 33.333 0.00 0.00 35.30 3.41
198 201 9.052759 TGTTCACTTTTATAAGACCTTGAAGAC 57.947 33.333 0.00 0.00 35.30 3.01
199 202 9.273016 CTGTTCACTTTTATAAGACCTTGAAGA 57.727 33.333 0.00 0.00 35.30 2.87
200 203 9.273016 TCTGTTCACTTTTATAAGACCTTGAAG 57.727 33.333 0.00 0.00 35.30 3.02
201 204 9.273016 CTCTGTTCACTTTTATAAGACCTTGAA 57.727 33.333 0.00 0.00 35.30 2.69
202 205 7.878127 CCTCTGTTCACTTTTATAAGACCTTGA 59.122 37.037 0.00 0.00 35.30 3.02
203 206 7.119846 CCCTCTGTTCACTTTTATAAGACCTTG 59.880 40.741 0.00 0.00 35.30 3.61
204 207 7.017254 TCCCTCTGTTCACTTTTATAAGACCTT 59.983 37.037 0.00 0.00 35.30 3.50
205 208 6.500751 TCCCTCTGTTCACTTTTATAAGACCT 59.499 38.462 0.00 0.00 35.30 3.85
206 209 6.708285 TCCCTCTGTTCACTTTTATAAGACC 58.292 40.000 0.00 0.00 35.30 3.85
207 210 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
208 211 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
209 212 8.532819 AGTACTCCCTCTGTTCACTTTTATAAG 58.467 37.037 0.00 0.00 37.40 1.73
210 213 8.431910 AGTACTCCCTCTGTTCACTTTTATAA 57.568 34.615 0.00 0.00 0.00 0.98
211 214 9.537852 TTAGTACTCCCTCTGTTCACTTTTATA 57.462 33.333 0.00 0.00 0.00 0.98
212 215 6.936968 AGTACTCCCTCTGTTCACTTTTAT 57.063 37.500 0.00 0.00 0.00 1.40
213 216 7.844493 TTAGTACTCCCTCTGTTCACTTTTA 57.156 36.000 0.00 0.00 0.00 1.52
214 217 6.742559 TTAGTACTCCCTCTGTTCACTTTT 57.257 37.500 0.00 0.00 0.00 2.27
215 218 6.936968 ATTAGTACTCCCTCTGTTCACTTT 57.063 37.500 0.00 0.00 0.00 2.66
216 219 6.936968 AATTAGTACTCCCTCTGTTCACTT 57.063 37.500 0.00 0.00 0.00 3.16
217 220 6.936968 AAATTAGTACTCCCTCTGTTCACT 57.063 37.500 0.00 0.00 0.00 3.41
220 223 9.478768 GCTATTAAATTAGTACTCCCTCTGTTC 57.521 37.037 0.00 0.00 0.00 3.18
221 224 8.430431 GGCTATTAAATTAGTACTCCCTCTGTT 58.570 37.037 0.00 0.00 0.00 3.16
222 225 7.567622 TGGCTATTAAATTAGTACTCCCTCTGT 59.432 37.037 0.00 0.00 0.00 3.41
223 226 7.963532 TGGCTATTAAATTAGTACTCCCTCTG 58.036 38.462 0.00 0.00 0.00 3.35
224 227 8.562949 TTGGCTATTAAATTAGTACTCCCTCT 57.437 34.615 0.00 0.00 0.00 3.69
225 228 9.053840 GTTTGGCTATTAAATTAGTACTCCCTC 57.946 37.037 0.00 0.00 0.00 4.30
226 229 8.779031 AGTTTGGCTATTAAATTAGTACTCCCT 58.221 33.333 0.00 0.00 0.00 4.20
227 230 8.975663 AGTTTGGCTATTAAATTAGTACTCCC 57.024 34.615 0.00 0.00 0.00 4.30
231 234 9.783256 CCACAAGTTTGGCTATTAAATTAGTAC 57.217 33.333 0.00 0.00 0.00 2.73
232 235 9.523168 ACCACAAGTTTGGCTATTAAATTAGTA 57.477 29.630 4.56 0.00 40.77 1.82
233 236 8.417273 ACCACAAGTTTGGCTATTAAATTAGT 57.583 30.769 4.56 0.00 40.77 2.24
336 339 6.680810 TCCGTACCGTCGATGATTTAATTAT 58.319 36.000 6.11 0.00 0.00 1.28
340 343 3.627123 TCTCCGTACCGTCGATGATTTAA 59.373 43.478 6.11 0.00 0.00 1.52
342 345 2.019249 TCTCCGTACCGTCGATGATTT 58.981 47.619 6.11 0.00 0.00 2.17
456 466 0.602905 CTCCTGGTGGGTCGTTTGTC 60.603 60.000 0.00 0.00 36.25 3.18
459 469 2.526046 CCCTCCTGGTGGGTCGTTT 61.526 63.158 23.06 0.00 39.82 3.60
461 471 3.907027 CTCCCTCCTGGTGGGTCGT 62.907 68.421 28.29 0.00 44.84 4.34
470 480 3.795041 CTGGCTGGCTCCCTCCTG 61.795 72.222 2.00 0.00 0.00 3.86
471 481 4.016790 TCTGGCTGGCTCCCTCCT 62.017 66.667 2.00 0.00 0.00 3.69
472 482 3.791586 GTCTGGCTGGCTCCCTCC 61.792 72.222 2.00 0.00 0.00 4.30
473 483 3.791586 GGTCTGGCTGGCTCCCTC 61.792 72.222 2.00 0.00 0.00 4.30
474 484 4.664267 TGGTCTGGCTGGCTCCCT 62.664 66.667 2.00 0.00 0.00 4.20
475 485 4.106925 CTGGTCTGGCTGGCTCCC 62.107 72.222 2.00 0.24 0.00 4.30
476 486 2.533974 CTTCTGGTCTGGCTGGCTCC 62.534 65.000 2.00 3.49 0.00 4.70
477 487 1.078567 CTTCTGGTCTGGCTGGCTC 60.079 63.158 2.00 0.00 0.00 4.70
478 488 2.600729 CCTTCTGGTCTGGCTGGCT 61.601 63.158 2.00 0.00 0.00 4.75
479 489 2.045536 CCTTCTGGTCTGGCTGGC 60.046 66.667 0.00 0.00 0.00 4.85
480 490 2.673523 CCCTTCTGGTCTGGCTGG 59.326 66.667 0.00 0.00 0.00 4.85
481 491 2.227036 ACCCCTTCTGGTCTGGCTG 61.227 63.158 0.00 0.00 31.15 4.85
482 492 2.208349 ACCCCTTCTGGTCTGGCT 59.792 61.111 0.00 0.00 31.15 4.75
510 520 1.974343 CCCGAAATGTTTCCGCCCA 60.974 57.895 0.25 0.00 33.68 5.36
1422 1565 2.344500 CCTGGTACCAAACGGCGA 59.656 61.111 17.11 0.00 0.00 5.54
1425 1568 0.036306 AGAAGCCTGGTACCAAACGG 59.964 55.000 17.11 14.92 0.00 4.44
1426 1569 2.028385 ACTAGAAGCCTGGTACCAAACG 60.028 50.000 17.11 7.47 31.94 3.60
1436 1579 3.927142 CGACCAACTAAACTAGAAGCCTG 59.073 47.826 0.00 0.00 0.00 4.85
1486 1629 5.756347 GCACGATATTGACCAAGTATTACCA 59.244 40.000 0.00 0.00 0.00 3.25
1561 1704 1.882912 TGCAGCTCTTACAACCACTG 58.117 50.000 0.00 0.00 0.00 3.66
1585 1730 0.172578 TTACTGCTGATGTCGGTCGG 59.827 55.000 0.00 0.00 0.00 4.79
1586 1731 1.990799 TTTACTGCTGATGTCGGTCG 58.009 50.000 0.00 0.00 0.00 4.79
1587 1732 6.257849 TGATTATTTTACTGCTGATGTCGGTC 59.742 38.462 0.00 0.00 0.00 4.79
1588 1733 6.112734 TGATTATTTTACTGCTGATGTCGGT 58.887 36.000 0.00 0.00 0.00 4.69
1612 1757 1.137086 CAGAGCCGGCACTATGTACTT 59.863 52.381 31.54 2.38 0.00 2.24
1659 1804 0.519077 GCCAGCAACTAACAGTCTGC 59.481 55.000 0.00 5.76 34.63 4.26
1696 1841 4.240096 GCATAAATATGTGCTGGCATTCC 58.760 43.478 0.00 0.00 40.23 3.01
1807 1960 0.109132 GGCTGCCATTTGCTACACAC 60.109 55.000 15.17 0.00 42.00 3.82
1826 1979 7.966812 TGGAAGCCTATACCATGCATATATAG 58.033 38.462 20.61 20.61 0.00 1.31
1846 2003 1.959282 GGGGCATTGCTTATCTGGAAG 59.041 52.381 8.82 0.00 0.00 3.46
1976 2135 8.705594 TCTTCTAACCAATTCCCTATCTACTTG 58.294 37.037 0.00 0.00 0.00 3.16
2043 2202 5.709631 TCATAAAAGGCTGAAACATGCTACA 59.290 36.000 0.00 0.00 0.00 2.74
2048 2207 4.860907 GCTGTCATAAAAGGCTGAAACATG 59.139 41.667 0.00 0.00 0.00 3.21
2072 2231 1.768275 TGGCCCATCGTAATGTGATCT 59.232 47.619 0.00 0.00 0.00 2.75
2084 2243 6.072452 GCTTATACAAACTTAGATGGCCCATC 60.072 42.308 16.25 16.25 40.80 3.51
2298 2461 1.742831 TGTGCGACAAAAGCAAAGACT 59.257 42.857 0.00 0.00 46.97 3.24
2302 2465 1.207390 GCATGTGCGACAAAAGCAAA 58.793 45.000 0.00 0.00 46.97 3.68
2432 2597 6.313905 GCATCTGTGTACAGTAAAATGCTACT 59.686 38.462 20.31 0.00 44.12 2.57
2476 2643 5.925397 GGCAATGAGATGTACTCTACTGATG 59.075 44.000 0.00 0.00 45.13 3.07
2498 2665 2.202566 GAACGGTATTGCTAGACTGGC 58.797 52.381 3.43 3.43 0.00 4.85
2502 2669 7.650504 TGTAATGTATGAACGGTATTGCTAGAC 59.349 37.037 0.00 0.00 0.00 2.59
2624 2792 9.113838 GTTAATTTCCACTACATCATCACATCT 57.886 33.333 0.00 0.00 0.00 2.90
2715 2887 4.202172 GGAAAACGGGTTTGAAGGAATTGA 60.202 41.667 0.00 0.00 32.36 2.57
2732 2905 2.124122 GCAATGTGGTCGTTGGAAAAC 58.876 47.619 0.00 0.00 39.96 2.43
2770 2946 6.284891 TCCTTTATCAATTTTTCCCAGCAG 57.715 37.500 0.00 0.00 0.00 4.24
2853 3029 6.715280 AGGAGAGAAACAAGCATTATCTTCA 58.285 36.000 0.00 0.00 28.08 3.02
2919 3096 6.463995 TTTTGACTTGGAAGTTAGCAACAT 57.536 33.333 0.00 0.00 39.88 2.71
2969 3146 1.280133 ACCACACAGTATGCTGCAGAT 59.720 47.619 20.43 10.74 46.30 2.90
2993 3170 0.539438 GTTGCCCCACTGATTCCACA 60.539 55.000 0.00 0.00 0.00 4.17
2996 3173 0.038166 TCTGTTGCCCCACTGATTCC 59.962 55.000 0.00 0.00 0.00 3.01
3059 3236 2.243221 AGCTTTCCCACCAGCATATCTT 59.757 45.455 0.00 0.00 38.61 2.40
3130 3307 0.539438 TAGCCCCACACTGCCAAAAG 60.539 55.000 0.00 0.00 0.00 2.27
3136 3313 4.736126 ATTTTAAATAGCCCCACACTGC 57.264 40.909 0.00 0.00 0.00 4.40
3169 3348 6.592798 AACATTCACACAAAATGAGCAAAG 57.407 33.333 3.06 0.00 37.51 2.77
3173 3352 6.697019 ACAGTAAACATTCACACAAAATGAGC 59.303 34.615 3.06 0.00 37.51 4.26
3174 3353 8.533965 CAACAGTAAACATTCACACAAAATGAG 58.466 33.333 3.06 0.00 37.51 2.90
3175 3354 8.031864 ACAACAGTAAACATTCACACAAAATGA 58.968 29.630 3.06 0.00 37.51 2.57
3176 3355 8.183830 ACAACAGTAAACATTCACACAAAATG 57.816 30.769 0.00 0.00 39.50 2.32
3180 3362 6.600032 ACCTACAACAGTAAACATTCACACAA 59.400 34.615 0.00 0.00 0.00 3.33
3190 3372 7.311364 TGAGTTTTGACCTACAACAGTAAAC 57.689 36.000 0.00 0.00 38.29 2.01
3204 3387 3.732721 GCATGTGCTCTTTGAGTTTTGAC 59.267 43.478 0.00 0.00 38.21 3.18
3237 3420 4.168101 TGTTTATCTCTTCAGGGTGGTCT 58.832 43.478 0.00 0.00 0.00 3.85
3297 3480 5.698832 TCAATGTTTTCCATCATCACGTTC 58.301 37.500 0.00 0.00 31.75 3.95
3333 3516 7.620880 ACCTTCAGTATATCTGCAAAGTACAA 58.379 34.615 0.00 0.00 43.32 2.41
3349 3532 7.630082 ACTTCCTGCAAATTATACCTTCAGTA 58.370 34.615 0.00 0.00 34.76 2.74
3352 3535 7.669722 AGAAACTTCCTGCAAATTATACCTTCA 59.330 33.333 0.00 0.00 0.00 3.02
3367 3550 5.799213 ACACTTAGGATCAGAAACTTCCTG 58.201 41.667 1.00 0.00 40.13 3.86
3385 3568 9.628500 AAGAACCTGAATTTTAGAAGTACACTT 57.372 29.630 0.00 0.00 39.23 3.16
3387 3570 9.052759 TCAAGAACCTGAATTTTAGAAGTACAC 57.947 33.333 0.00 0.00 0.00 2.90
3397 3580 3.119849 CCGCGATCAAGAACCTGAATTTT 60.120 43.478 8.23 0.00 0.00 1.82
3417 3600 0.813210 GCAGCTCAATCTTCTCCCCG 60.813 60.000 0.00 0.00 0.00 5.73
3500 3683 6.258160 CAATTATTAAAACCTGTGAGCGGAG 58.742 40.000 0.00 0.00 0.00 4.63
3501 3684 5.124776 CCAATTATTAAAACCTGTGAGCGGA 59.875 40.000 0.00 0.00 0.00 5.54
3502 3685 5.339990 CCAATTATTAAAACCTGTGAGCGG 58.660 41.667 0.00 0.00 0.00 5.52
3503 3686 4.798387 GCCAATTATTAAAACCTGTGAGCG 59.202 41.667 0.00 0.00 0.00 5.03
3504 3687 5.576774 GTGCCAATTATTAAAACCTGTGAGC 59.423 40.000 0.00 0.00 0.00 4.26
3505 3688 6.686630 TGTGCCAATTATTAAAACCTGTGAG 58.313 36.000 0.00 0.00 0.00 3.51
3506 3689 6.656632 TGTGCCAATTATTAAAACCTGTGA 57.343 33.333 0.00 0.00 0.00 3.58
3507 3690 7.818930 AGAATGTGCCAATTATTAAAACCTGTG 59.181 33.333 0.00 0.00 0.00 3.66
3508 3691 7.906327 AGAATGTGCCAATTATTAAAACCTGT 58.094 30.769 0.00 0.00 0.00 4.00
3509 3692 8.776376 AAGAATGTGCCAATTATTAAAACCTG 57.224 30.769 0.00 0.00 0.00 4.00
3510 3693 9.791801 AAAAGAATGTGCCAATTATTAAAACCT 57.208 25.926 0.00 0.00 0.00 3.50
3516 3699 8.356657 CGGGATAAAAGAATGTGCCAATTATTA 58.643 33.333 0.00 0.00 0.00 0.98
3517 3700 7.209475 CGGGATAAAAGAATGTGCCAATTATT 58.791 34.615 0.00 0.00 0.00 1.40
3518 3701 6.738453 GCGGGATAAAAGAATGTGCCAATTAT 60.738 38.462 0.00 0.00 0.00 1.28
3519 3702 5.451242 GCGGGATAAAAGAATGTGCCAATTA 60.451 40.000 0.00 0.00 0.00 1.40
3520 3703 4.680440 GCGGGATAAAAGAATGTGCCAATT 60.680 41.667 0.00 0.00 0.00 2.32
3521 3704 3.181476 GCGGGATAAAAGAATGTGCCAAT 60.181 43.478 0.00 0.00 0.00 3.16
3522 3705 2.165437 GCGGGATAAAAGAATGTGCCAA 59.835 45.455 0.00 0.00 0.00 4.52
3523 3706 1.748493 GCGGGATAAAAGAATGTGCCA 59.252 47.619 0.00 0.00 0.00 4.92
3524 3707 1.067060 GGCGGGATAAAAGAATGTGCC 59.933 52.381 0.00 0.00 0.00 5.01
3525 3708 1.067060 GGGCGGGATAAAAGAATGTGC 59.933 52.381 0.00 0.00 0.00 4.57
3526 3709 2.358898 CAGGGCGGGATAAAAGAATGTG 59.641 50.000 0.00 0.00 0.00 3.21
3527 3710 2.025321 ACAGGGCGGGATAAAAGAATGT 60.025 45.455 0.00 0.00 0.00 2.71
3528 3711 2.654863 ACAGGGCGGGATAAAAGAATG 58.345 47.619 0.00 0.00 0.00 2.67
3529 3712 3.458487 AGTACAGGGCGGGATAAAAGAAT 59.542 43.478 0.00 0.00 0.00 2.40
3530 3713 2.841881 AGTACAGGGCGGGATAAAAGAA 59.158 45.455 0.00 0.00 0.00 2.52
3531 3714 2.169769 CAGTACAGGGCGGGATAAAAGA 59.830 50.000 0.00 0.00 0.00 2.52
3532 3715 2.561569 CAGTACAGGGCGGGATAAAAG 58.438 52.381 0.00 0.00 0.00 2.27
3533 3716 1.210967 CCAGTACAGGGCGGGATAAAA 59.789 52.381 0.00 0.00 0.00 1.52
3534 3717 0.834612 CCAGTACAGGGCGGGATAAA 59.165 55.000 0.00 0.00 0.00 1.40
3535 3718 1.052124 CCCAGTACAGGGCGGGATAA 61.052 60.000 10.86 0.00 43.10 1.75
3536 3719 1.458777 CCCAGTACAGGGCGGGATA 60.459 63.158 10.86 0.00 43.10 2.59
3537 3720 2.768344 CCCAGTACAGGGCGGGAT 60.768 66.667 10.86 0.00 43.10 3.85
3555 3738 7.550196 GGAATCGAACCCAATTAAAGTACAGTA 59.450 37.037 0.00 0.00 0.00 2.74
3575 3758 9.950680 ACAATAAATAATAACAGCTTGGAATCG 57.049 29.630 0.00 0.00 0.00 3.34
3600 3783 6.935208 CCAAGCCTAATTATCCTGGTACTAAC 59.065 42.308 0.00 0.00 0.00 2.34
3686 3869 7.806180 ACAGTTTAGTATAAAGCTGGATCCAT 58.194 34.615 16.63 2.31 40.73 3.41
3687 3870 7.195374 ACAGTTTAGTATAAAGCTGGATCCA 57.805 36.000 15.27 15.27 40.73 3.41
3743 3927 6.759827 ACCTAACACAACAACTACTAAGTGTG 59.240 38.462 0.00 0.00 39.82 3.82
3744 3928 6.759827 CACCTAACACAACAACTACTAAGTGT 59.240 38.462 0.00 0.00 41.48 3.55
3745 3929 6.292703 GCACCTAACACAACAACTACTAAGTG 60.293 42.308 0.00 0.00 35.62 3.16
3746 3930 5.756833 GCACCTAACACAACAACTACTAAGT 59.243 40.000 0.00 0.00 37.65 2.24
3747 3931 5.989777 AGCACCTAACACAACAACTACTAAG 59.010 40.000 0.00 0.00 0.00 2.18
3748 3932 5.920903 AGCACCTAACACAACAACTACTAA 58.079 37.500 0.00 0.00 0.00 2.24
3749 3933 5.303589 AGAGCACCTAACACAACAACTACTA 59.696 40.000 0.00 0.00 0.00 1.82
3750 3934 4.101119 AGAGCACCTAACACAACAACTACT 59.899 41.667 0.00 0.00 0.00 2.57
3751 3935 4.377897 AGAGCACCTAACACAACAACTAC 58.622 43.478 0.00 0.00 0.00 2.73
3757 3944 5.447818 GCATATCAAGAGCACCTAACACAAC 60.448 44.000 0.00 0.00 0.00 3.32
3792 3979 3.454371 AGTATTAGCCAGTTACGCCTG 57.546 47.619 0.00 0.00 0.00 4.85
3793 3980 3.449737 TGAAGTATTAGCCAGTTACGCCT 59.550 43.478 0.00 0.00 0.00 5.52
3814 4058 1.137872 ACTAGCCAGCCTTCTTCGATG 59.862 52.381 0.00 0.00 0.00 3.84
3818 4062 2.101750 GGAGTACTAGCCAGCCTTCTTC 59.898 54.545 0.00 0.00 0.00 2.87
3821 4065 0.753867 GGGAGTACTAGCCAGCCTTC 59.246 60.000 0.00 0.00 0.00 3.46
3824 4068 0.105913 AGAGGGAGTACTAGCCAGCC 60.106 60.000 0.00 0.00 0.00 4.85
3826 4070 2.303175 GACAGAGGGAGTACTAGCCAG 58.697 57.143 0.00 0.00 0.00 4.85
3827 4071 1.063867 GGACAGAGGGAGTACTAGCCA 60.064 57.143 0.00 0.00 0.00 4.75
3828 4072 1.694844 GGACAGAGGGAGTACTAGCC 58.305 60.000 0.00 0.00 0.00 3.93
4171 4415 3.255379 CGCCTCGACGCCTAAAGC 61.255 66.667 0.63 0.00 38.52 3.51
4191 4435 1.526225 GCTTTAAGGCGCTAGGGGG 60.526 63.158 7.64 0.00 0.00 5.40
4192 4436 0.393808 TTGCTTTAAGGCGCTAGGGG 60.394 55.000 7.64 0.00 34.52 4.79
4193 4437 1.401905 CTTTGCTTTAAGGCGCTAGGG 59.598 52.381 7.64 1.65 34.52 3.53
4194 4438 1.202188 GCTTTGCTTTAAGGCGCTAGG 60.202 52.381 7.64 0.00 31.39 3.02
4195 4439 2.179949 GCTTTGCTTTAAGGCGCTAG 57.820 50.000 7.64 3.47 31.39 3.42
4200 4444 1.065572 GCGACGCTTTGCTTTAAGGC 61.066 55.000 13.73 1.97 37.96 4.35
4201 4445 0.454452 GGCGACGCTTTGCTTTAAGG 60.454 55.000 20.77 0.00 31.91 2.69
4202 4446 0.517316 AGGCGACGCTTTGCTTTAAG 59.483 50.000 20.77 0.00 31.91 1.85
4203 4447 0.948678 AAGGCGACGCTTTGCTTTAA 59.051 45.000 20.77 0.00 29.68 1.52
4204 4448 1.798283 TAAGGCGACGCTTTGCTTTA 58.202 45.000 25.34 3.74 33.56 1.85
4205 4449 0.948678 TTAAGGCGACGCTTTGCTTT 59.051 45.000 25.34 5.13 35.63 3.51
4206 4450 0.948678 TTTAAGGCGACGCTTTGCTT 59.051 45.000 25.34 18.47 31.91 3.91
4207 4451 0.948678 TTTTAAGGCGACGCTTTGCT 59.051 45.000 25.34 8.93 31.91 3.91
4208 4452 1.450533 GTTTTTAAGGCGACGCTTTGC 59.549 47.619 25.34 6.58 0.00 3.68
4209 4453 2.722071 TGTTTTTAAGGCGACGCTTTG 58.278 42.857 25.34 0.00 0.00 2.77
4210 4454 3.636282 ATGTTTTTAAGGCGACGCTTT 57.364 38.095 21.23 21.23 0.00 3.51
4211 4455 3.126343 CCTATGTTTTTAAGGCGACGCTT 59.874 43.478 20.77 9.77 0.00 4.68
4212 4456 2.676342 CCTATGTTTTTAAGGCGACGCT 59.324 45.455 20.77 2.90 0.00 5.07
4213 4457 2.417586 ACCTATGTTTTTAAGGCGACGC 59.582 45.455 12.43 12.43 33.42 5.19
4214 4458 4.673534 AACCTATGTTTTTAAGGCGACG 57.326 40.909 0.00 0.00 33.42 5.12
4215 4459 8.667463 TGTAATAACCTATGTTTTTAAGGCGAC 58.333 33.333 0.00 0.00 35.87 5.19
4216 4460 8.789825 TGTAATAACCTATGTTTTTAAGGCGA 57.210 30.769 0.00 0.00 35.87 5.54
4217 4461 9.659830 GATGTAATAACCTATGTTTTTAAGGCG 57.340 33.333 0.00 0.00 35.87 5.52
4218 4462 9.961265 GGATGTAATAACCTATGTTTTTAAGGC 57.039 33.333 0.00 0.00 35.87 4.35
4231 4475 7.872993 CGTCTCACATATTGGATGTAATAACCT 59.127 37.037 0.00 0.00 0.00 3.50
4232 4476 7.117812 CCGTCTCACATATTGGATGTAATAACC 59.882 40.741 0.00 0.00 0.00 2.85
4233 4477 7.870954 TCCGTCTCACATATTGGATGTAATAAC 59.129 37.037 0.00 0.00 0.00 1.89
4234 4478 7.958088 TCCGTCTCACATATTGGATGTAATAA 58.042 34.615 0.00 0.00 0.00 1.40
4235 4479 7.309805 CCTCCGTCTCACATATTGGATGTAATA 60.310 40.741 0.00 0.00 0.00 0.98
4236 4480 6.419484 TCCGTCTCACATATTGGATGTAAT 57.581 37.500 0.00 0.00 0.00 1.89
4237 4481 5.221441 CCTCCGTCTCACATATTGGATGTAA 60.221 44.000 0.00 0.00 0.00 2.41
4238 4482 4.280929 CCTCCGTCTCACATATTGGATGTA 59.719 45.833 0.00 0.00 0.00 2.29
4239 4483 3.070159 CCTCCGTCTCACATATTGGATGT 59.930 47.826 0.00 0.00 0.00 3.06
4240 4484 3.555795 CCCTCCGTCTCACATATTGGATG 60.556 52.174 0.00 0.00 0.00 3.51
4241 4485 2.634940 CCCTCCGTCTCACATATTGGAT 59.365 50.000 0.00 0.00 0.00 3.41
4242 4486 2.039418 CCCTCCGTCTCACATATTGGA 58.961 52.381 0.00 0.00 0.00 3.53
4243 4487 2.036475 CTCCCTCCGTCTCACATATTGG 59.964 54.545 0.00 0.00 0.00 3.16
4244 4488 2.695666 ACTCCCTCCGTCTCACATATTG 59.304 50.000 0.00 0.00 0.00 1.90
4245 4489 3.033659 ACTCCCTCCGTCTCACATATT 57.966 47.619 0.00 0.00 0.00 1.28
4246 4490 2.757894 ACTCCCTCCGTCTCACATAT 57.242 50.000 0.00 0.00 0.00 1.78
4247 4491 2.508716 AGTACTCCCTCCGTCTCACATA 59.491 50.000 0.00 0.00 0.00 2.29
4248 4492 1.285373 AGTACTCCCTCCGTCTCACAT 59.715 52.381 0.00 0.00 0.00 3.21
4249 4493 0.697079 AGTACTCCCTCCGTCTCACA 59.303 55.000 0.00 0.00 0.00 3.58
4250 4494 1.744522 GAAGTACTCCCTCCGTCTCAC 59.255 57.143 0.00 0.00 0.00 3.51
4251 4495 1.634459 AGAAGTACTCCCTCCGTCTCA 59.366 52.381 0.00 0.00 0.00 3.27
4252 4496 2.423446 AGAAGTACTCCCTCCGTCTC 57.577 55.000 0.00 0.00 0.00 3.36
4253 4497 2.903375 AAGAAGTACTCCCTCCGTCT 57.097 50.000 0.00 0.00 0.00 4.18
4254 4498 3.318557 CCATAAGAAGTACTCCCTCCGTC 59.681 52.174 0.00 0.00 0.00 4.79
4255 4499 3.053095 TCCATAAGAAGTACTCCCTCCGT 60.053 47.826 0.00 0.00 0.00 4.69
4256 4500 3.563223 TCCATAAGAAGTACTCCCTCCG 58.437 50.000 0.00 0.00 0.00 4.63
4257 4501 5.011227 GTCATCCATAAGAAGTACTCCCTCC 59.989 48.000 0.00 0.00 0.00 4.30
4258 4502 5.836358 AGTCATCCATAAGAAGTACTCCCTC 59.164 44.000 0.00 0.00 0.00 4.30
4259 4503 5.782925 AGTCATCCATAAGAAGTACTCCCT 58.217 41.667 0.00 0.00 0.00 4.20
4260 4504 7.005296 TCTAGTCATCCATAAGAAGTACTCCC 58.995 42.308 0.00 0.00 0.00 4.30
4261 4505 7.940137 TCTCTAGTCATCCATAAGAAGTACTCC 59.060 40.741 0.00 0.00 0.00 3.85
4262 4506 8.780249 GTCTCTAGTCATCCATAAGAAGTACTC 58.220 40.741 0.00 0.00 0.00 2.59
4263 4507 7.722285 GGTCTCTAGTCATCCATAAGAAGTACT 59.278 40.741 0.00 0.00 0.00 2.73
4264 4508 7.722285 AGGTCTCTAGTCATCCATAAGAAGTAC 59.278 40.741 0.00 0.00 0.00 2.73
4308 4552 9.566432 CCTTATCAGCTATAGGAGAAAACAATT 57.434 33.333 1.04 0.00 0.00 2.32
4309 4553 8.938883 TCCTTATCAGCTATAGGAGAAAACAAT 58.061 33.333 1.04 0.00 0.00 2.71
4310 4554 8.204836 GTCCTTATCAGCTATAGGAGAAAACAA 58.795 37.037 1.04 0.00 0.00 2.83
4311 4555 7.565398 AGTCCTTATCAGCTATAGGAGAAAACA 59.435 37.037 1.04 0.00 0.00 2.83
4312 4556 7.958088 AGTCCTTATCAGCTATAGGAGAAAAC 58.042 38.462 1.04 0.00 0.00 2.43
4313 4557 8.554490 AAGTCCTTATCAGCTATAGGAGAAAA 57.446 34.615 1.04 0.00 0.00 2.29
4321 4569 8.777578 TCACCTTAAAGTCCTTATCAGCTATA 57.222 34.615 0.00 0.00 0.00 1.31
4355 4603 6.987404 GGAAGTAGGAATTACAGGAAGATGAC 59.013 42.308 0.00 0.00 34.56 3.06
4356 4604 6.183360 CGGAAGTAGGAATTACAGGAAGATGA 60.183 42.308 0.00 0.00 34.56 2.92
4357 4605 5.986135 CGGAAGTAGGAATTACAGGAAGATG 59.014 44.000 0.00 0.00 34.56 2.90
4358 4606 5.661759 ACGGAAGTAGGAATTACAGGAAGAT 59.338 40.000 0.00 0.00 46.88 2.40
4359 4607 5.021458 ACGGAAGTAGGAATTACAGGAAGA 58.979 41.667 0.00 0.00 46.88 2.87
4360 4608 5.340439 ACGGAAGTAGGAATTACAGGAAG 57.660 43.478 0.00 0.00 46.88 3.46
4376 4624 2.240493 ACTGTTCTCACCAACGGAAG 57.760 50.000 0.00 0.00 36.32 3.46
4377 4625 2.702592 AACTGTTCTCACCAACGGAA 57.297 45.000 0.00 0.00 36.32 4.30
4378 4626 2.431419 TGTAACTGTTCTCACCAACGGA 59.569 45.455 0.00 0.00 36.32 4.69
4379 4627 2.828877 TGTAACTGTTCTCACCAACGG 58.171 47.619 0.00 0.00 38.44 4.44
4380 4628 6.721571 AATATGTAACTGTTCTCACCAACG 57.278 37.500 0.00 0.00 0.00 4.10
4381 4629 7.871853 ACAAATATGTAACTGTTCTCACCAAC 58.128 34.615 0.00 0.00 38.24 3.77
4382 4630 8.458573 AACAAATATGTAACTGTTCTCACCAA 57.541 30.769 0.00 0.00 39.40 3.67
4391 4639 7.658575 ACGTTACCTGAACAAATATGTAACTGT 59.341 33.333 0.00 0.00 39.40 3.55
4394 4642 7.747357 CCAACGTTACCTGAACAAATATGTAAC 59.253 37.037 0.00 0.00 39.40 2.50
4395 4643 7.660617 TCCAACGTTACCTGAACAAATATGTAA 59.339 33.333 0.00 0.00 39.40 2.41
4418 4666 9.111519 TGCTCCATTAGTAATAAATCCTATCCA 57.888 33.333 0.00 0.00 0.00 3.41
4433 4681 9.359653 AGCAGAAATAATTAATGCTCCATTAGT 57.640 29.630 10.38 0.00 43.46 2.24
4434 4682 9.622004 CAGCAGAAATAATTAATGCTCCATTAG 57.378 33.333 12.31 1.71 45.03 1.73
4438 4689 7.408756 AACAGCAGAAATAATTAATGCTCCA 57.591 32.000 12.31 0.00 45.03 3.86
4451 4702 8.656849 CAGTTAACTTATCGTAACAGCAGAAAT 58.343 33.333 5.07 0.00 0.00 2.17
4485 4736 9.106070 GAAAACACTTAAAACTCTTGTAGAGGA 57.894 33.333 8.44 0.00 46.45 3.71
4486 4737 8.343366 GGAAAACACTTAAAACTCTTGTAGAGG 58.657 37.037 8.44 0.00 46.45 3.69
4488 4739 8.889717 CAGGAAAACACTTAAAACTCTTGTAGA 58.110 33.333 0.00 0.00 0.00 2.59
4492 4743 6.564328 AGCAGGAAAACACTTAAAACTCTTG 58.436 36.000 0.00 0.00 0.00 3.02
4501 4752 5.560724 AGAGCAATAGCAGGAAAACACTTA 58.439 37.500 0.00 0.00 45.49 2.24
4506 4757 5.358160 ACCATTAGAGCAATAGCAGGAAAAC 59.642 40.000 0.00 0.00 45.49 2.43
4509 4760 4.778213 ACCATTAGAGCAATAGCAGGAA 57.222 40.909 0.00 0.00 45.49 3.36
4535 4786 7.050377 CACATCAACTTGGAGATATAACTGGT 58.950 38.462 0.00 0.00 0.00 4.00
4556 4807 5.934625 GTGTCTCCTTATCACAAGAACACAT 59.065 40.000 0.00 0.00 33.04 3.21
4557 4808 5.163353 TGTGTCTCCTTATCACAAGAACACA 60.163 40.000 12.06 12.06 38.80 3.72
4559 4810 5.545063 TGTGTCTCCTTATCACAAGAACA 57.455 39.130 0.00 0.00 38.80 3.18
4566 4817 3.678548 GGTCGTTTGTGTCTCCTTATCAC 59.321 47.826 0.00 0.00 0.00 3.06
4574 4825 5.049680 ACAACATTATGGTCGTTTGTGTCTC 60.050 40.000 0.00 0.00 0.00 3.36
4584 4835 6.422776 AGCTTAAGAACAACATTATGGTCG 57.577 37.500 6.67 0.00 41.99 4.79
4585 4836 7.029563 CCAAGCTTAAGAACAACATTATGGTC 58.970 38.462 6.67 0.00 37.29 4.02
4587 4838 6.332630 CCCAAGCTTAAGAACAACATTATGG 58.667 40.000 6.67 0.00 0.00 2.74
4589 4840 5.480073 TGCCCAAGCTTAAGAACAACATTAT 59.520 36.000 6.67 0.00 40.80 1.28
4590 4841 4.830046 TGCCCAAGCTTAAGAACAACATTA 59.170 37.500 6.67 0.00 40.80 1.90
4595 4847 3.495331 TGATGCCCAAGCTTAAGAACAA 58.505 40.909 6.67 0.00 40.80 2.83
4605 4857 5.632244 AATTCAAATTTTGATGCCCAAGC 57.368 34.783 12.39 0.00 39.84 4.01
4622 4874 7.428020 CAGGAGAACATCAACTTCAAAATTCA 58.572 34.615 0.00 0.00 0.00 2.57
4623 4875 6.865205 CCAGGAGAACATCAACTTCAAAATTC 59.135 38.462 0.00 0.00 0.00 2.17
4624 4876 6.739565 GCCAGGAGAACATCAACTTCAAAATT 60.740 38.462 0.00 0.00 0.00 1.82
4631 4883 2.373169 TCAGCCAGGAGAACATCAACTT 59.627 45.455 0.00 0.00 0.00 2.66
4632 4884 1.980765 TCAGCCAGGAGAACATCAACT 59.019 47.619 0.00 0.00 0.00 3.16
4633 4885 2.479566 TCAGCCAGGAGAACATCAAC 57.520 50.000 0.00 0.00 0.00 3.18
4634 4886 3.519107 TGTATCAGCCAGGAGAACATCAA 59.481 43.478 0.00 0.00 0.00 2.57
4641 4893 0.175760 GCGTTGTATCAGCCAGGAGA 59.824 55.000 0.00 0.00 0.00 3.71
4654 4906 1.449601 CTAAGATGGGCGGCGTTGT 60.450 57.895 9.37 0.00 0.00 3.32
4657 4909 2.996168 GATGCTAAGATGGGCGGCGT 62.996 60.000 9.37 0.00 0.00 5.68
4658 4910 2.281070 ATGCTAAGATGGGCGGCG 60.281 61.111 0.51 0.51 0.00 6.46
4659 4911 1.968540 GGATGCTAAGATGGGCGGC 60.969 63.158 0.00 0.00 0.00 6.53
4660 4912 0.604780 CAGGATGCTAAGATGGGCGG 60.605 60.000 0.00 0.00 0.00 6.13
4661 4913 0.604780 CCAGGATGCTAAGATGGGCG 60.605 60.000 0.00 0.00 31.97 6.13
4663 4915 2.053244 AGACCAGGATGCTAAGATGGG 58.947 52.381 0.00 0.00 35.26 4.00
4664 4916 3.853355 AAGACCAGGATGCTAAGATGG 57.147 47.619 0.00 0.00 37.07 3.51
4672 4924 2.225467 GCCAGAATAAGACCAGGATGC 58.775 52.381 0.00 0.00 31.97 3.91
4708 4962 6.206634 TGAAATACCCAAAAGCTCAACACTAG 59.793 38.462 0.00 0.00 0.00 2.57
4711 4965 5.195001 TGAAATACCCAAAAGCTCAACAC 57.805 39.130 0.00 0.00 0.00 3.32
4723 4977 8.837099 ATCATGTTATCCTTTTGAAATACCCA 57.163 30.769 0.00 0.00 0.00 4.51
4731 4985 9.851686 AGTAGCAATATCATGTTATCCTTTTGA 57.148 29.630 0.00 0.00 0.00 2.69
4771 5025 7.441017 ACACATGGTATGTTTATGCAAACTTT 58.559 30.769 0.00 0.00 43.73 2.66
4783 5037 7.041107 GCATAATTGGAAACACATGGTATGTT 58.959 34.615 0.00 0.00 42.70 2.71
4786 5040 7.123997 TGAAGCATAATTGGAAACACATGGTAT 59.876 33.333 0.00 0.00 42.67 2.73
4789 5043 5.722263 TGAAGCATAATTGGAAACACATGG 58.278 37.500 0.00 0.00 42.67 3.66
4793 5047 5.634859 CCAACTGAAGCATAATTGGAAACAC 59.365 40.000 0.00 0.00 42.04 3.32
4801 5055 6.182627 TCAGACATCCAACTGAAGCATAATT 58.817 36.000 0.00 0.00 39.68 1.40
4811 5065 2.880268 TGCTGTTTCAGACATCCAACTG 59.120 45.455 0.66 0.00 37.69 3.16
4812 5066 3.213206 TGCTGTTTCAGACATCCAACT 57.787 42.857 0.66 0.00 37.69 3.16
4839 5093 7.707893 GCATGCACACCATTAAAAATCTTAGAT 59.292 33.333 14.21 0.00 29.71 1.98
4844 5098 5.149973 TGCATGCACACCATTAAAAATCT 57.850 34.783 18.46 0.00 29.71 2.40
4848 5102 5.761726 TGAAATTGCATGCACACCATTAAAA 59.238 32.000 22.58 1.08 29.71 1.52
4854 5108 1.001068 CCTGAAATTGCATGCACACCA 59.999 47.619 22.58 14.58 0.00 4.17
4857 5111 0.037139 GGCCTGAAATTGCATGCACA 60.037 50.000 22.58 14.25 32.03 4.57
4860 5114 0.036199 TTGGGCCTGAAATTGCATGC 60.036 50.000 11.82 11.82 0.00 4.06
4861 5115 1.551430 TCTTGGGCCTGAAATTGCATG 59.449 47.619 4.53 0.00 0.00 4.06
4863 5117 1.941377 ATCTTGGGCCTGAAATTGCA 58.059 45.000 4.53 0.00 0.00 4.08
4864 5118 3.264947 GAAATCTTGGGCCTGAAATTGC 58.735 45.455 4.53 0.00 0.00 3.56
4865 5119 4.501071 CTGAAATCTTGGGCCTGAAATTG 58.499 43.478 4.53 0.00 0.00 2.32
4948 5202 1.522092 GACGATGATGCCCAGGACA 59.478 57.895 0.00 0.00 0.00 4.02
5002 5256 0.033601 ACTTGCCACAGTTGAACCCA 60.034 50.000 0.00 0.00 0.00 4.51
5005 5259 1.388547 TGGACTTGCCACAGTTGAAC 58.611 50.000 0.00 0.00 43.33 3.18
5021 5275 2.618302 CCTCGAGTAGTCCTCACTTGGA 60.618 54.545 12.31 0.00 40.48 3.53
5022 5276 1.746220 CCTCGAGTAGTCCTCACTTGG 59.254 57.143 12.31 0.00 40.48 3.61
5023 5277 2.420722 GACCTCGAGTAGTCCTCACTTG 59.579 54.545 12.31 0.00 40.48 3.16
5034 5288 1.270465 TGTGTCTCACGACCTCGAGTA 60.270 52.381 12.31 0.00 43.02 2.59
5036 5290 0.805614 ATGTGTCTCACGACCTCGAG 59.194 55.000 5.13 5.13 43.02 4.04
5063 5317 6.015434 TGCTCGAATCAGCAGTAATATAAGGA 60.015 38.462 3.84 0.00 44.73 3.36
5101 5357 5.301555 AGAGAAGAAAGAACACTAAGCACC 58.698 41.667 0.00 0.00 0.00 5.01
5102 5358 7.115663 CACTAGAGAAGAAAGAACACTAAGCAC 59.884 40.741 0.00 0.00 0.00 4.40
5103 5359 7.148641 CACTAGAGAAGAAAGAACACTAAGCA 58.851 38.462 0.00 0.00 0.00 3.91
5105 5361 7.115663 GCACACTAGAGAAGAAAGAACACTAAG 59.884 40.741 0.00 0.00 0.00 2.18
5106 5362 6.924060 GCACACTAGAGAAGAAAGAACACTAA 59.076 38.462 0.00 0.00 0.00 2.24
5107 5363 6.448006 GCACACTAGAGAAGAAAGAACACTA 58.552 40.000 0.00 0.00 0.00 2.74
5108 5364 5.293560 GCACACTAGAGAAGAAAGAACACT 58.706 41.667 0.00 0.00 0.00 3.55
5109 5365 4.149046 CGCACACTAGAGAAGAAAGAACAC 59.851 45.833 0.00 0.00 0.00 3.32
5110 5366 4.299155 CGCACACTAGAGAAGAAAGAACA 58.701 43.478 0.00 0.00 0.00 3.18
5121 5378 2.510238 GGCCAGCGCACACTAGAG 60.510 66.667 11.47 0.00 36.38 2.43
5198 5455 2.203015 CACCCATCCGGCGGTAAG 60.203 66.667 27.32 16.20 33.26 2.34
5206 5463 4.802051 CCAGCCACCACCCATCCG 62.802 72.222 0.00 0.00 0.00 4.18
5337 5594 4.202441 AGCAGACACATCCACATAATTCC 58.798 43.478 0.00 0.00 0.00 3.01
5343 5600 2.165167 CCAAAGCAGACACATCCACAT 58.835 47.619 0.00 0.00 0.00 3.21
5349 5606 2.636893 AGAGAGACCAAAGCAGACACAT 59.363 45.455 0.00 0.00 0.00 3.21
5359 5616 1.144913 CCCCCAACAAGAGAGACCAAA 59.855 52.381 0.00 0.00 0.00 3.28
5366 5623 1.463214 TCCAGCCCCCAACAAGAGA 60.463 57.895 0.00 0.00 0.00 3.10
5414 5671 3.195698 CGCGTAGAAGCCAAGGCC 61.196 66.667 7.62 0.00 43.17 5.19
5417 5674 1.787847 CCAACGCGTAGAAGCCAAG 59.212 57.895 14.46 0.00 0.00 3.61
5424 5681 1.666553 CAACTGGCCAACGCGTAGA 60.667 57.895 14.46 0.00 35.02 2.59
5425 5682 2.860293 CAACTGGCCAACGCGTAG 59.140 61.111 14.46 8.57 35.02 3.51
5426 5683 3.350612 GCAACTGGCCAACGCGTA 61.351 61.111 14.46 0.00 36.11 4.42
5428 5685 4.389576 GAGCAACTGGCCAACGCG 62.390 66.667 7.01 3.53 46.50 6.01
5473 5730 2.092211 GCAACAAGGTTCATCTACGTCG 59.908 50.000 0.00 0.00 0.00 5.12
5475 5732 2.066262 CGCAACAAGGTTCATCTACGT 58.934 47.619 0.00 0.00 0.00 3.57
5481 5738 1.001378 GCAGAACGCAACAAGGTTCAT 60.001 47.619 6.67 0.00 43.79 2.57
5483 5740 0.663153 AGCAGAACGCAACAAGGTTC 59.337 50.000 0.00 0.00 46.13 3.62
5515 5772 4.348486 TGACCCCAAGCTATGCAAATAAA 58.652 39.130 0.00 0.00 0.00 1.40
5534 5791 1.947456 GCAAACGGGAAGGGATATGAC 59.053 52.381 0.00 0.00 0.00 3.06
5546 5803 2.354821 GCCTCTATTAACAGCAAACGGG 59.645 50.000 0.00 0.00 0.00 5.28
5582 5840 2.517959 CCCATGGATTGCCGAATACAT 58.482 47.619 15.22 0.00 43.02 2.29
5583 5841 1.979855 CCCATGGATTGCCGAATACA 58.020 50.000 15.22 0.00 36.80 2.29
5584 5842 0.598065 GCCCATGGATTGCCGAATAC 59.402 55.000 15.22 0.00 36.79 1.89
5585 5843 0.888736 CGCCCATGGATTGCCGAATA 60.889 55.000 15.22 0.00 36.79 1.75
5586 5844 2.195567 CGCCCATGGATTGCCGAAT 61.196 57.895 15.22 0.00 36.79 3.34
5611 5869 0.388649 CAGCGTACGCATATCCCTCC 60.389 60.000 38.58 8.51 44.88 4.30
5618 5876 1.226745 CCGGAACAGCGTACGCATA 60.227 57.895 38.58 0.00 44.88 3.14
5648 6580 1.065491 GGTGGGTGATATCACTGCACA 60.065 52.381 29.87 21.32 45.73 4.57
5653 6585 1.134401 CAAGCGGTGGGTGATATCACT 60.134 52.381 29.87 10.24 45.73 3.41
5702 6634 5.049680 ACAGTAAAACCGAAGTATTGTGCAG 60.050 40.000 0.00 0.00 0.00 4.41
5738 6723 0.389757 GCTACAGTAGGCTACAGGGC 59.610 60.000 25.48 20.21 41.20 5.19
5741 6726 1.067821 GGCTGCTACAGTAGGCTACAG 59.932 57.143 25.48 20.10 46.74 2.74
5742 6727 1.112113 GGCTGCTACAGTAGGCTACA 58.888 55.000 25.48 5.27 46.74 2.74
5743 6728 3.969995 GGCTGCTACAGTAGGCTAC 57.030 57.895 16.93 16.93 46.74 3.58
5747 6732 1.690219 CCCCAGGCTGCTACAGTAGG 61.690 65.000 9.56 1.83 33.43 3.18
5748 6733 1.826024 CCCCAGGCTGCTACAGTAG 59.174 63.158 9.56 2.85 33.43 2.57
5749 6734 2.367202 GCCCCAGGCTGCTACAGTA 61.367 63.158 9.56 0.00 46.69 2.74
5775 6773 1.075748 GGAGCTTGGATTGGGCCAT 60.076 57.895 7.26 0.00 37.86 4.40
5799 6797 2.281070 CCGTGCTTGCTCCTGTGT 60.281 61.111 0.00 0.00 0.00 3.72
5826 6826 1.191096 GCCGCAGCAATAAAATCGTG 58.809 50.000 0.00 0.00 39.53 4.35
5827 6827 3.622459 GCCGCAGCAATAAAATCGT 57.378 47.368 0.00 0.00 39.53 3.73
5873 6873 5.931146 AGCTATCATTTCTGTCGAATCCATC 59.069 40.000 0.00 0.00 0.00 3.51
5874 6874 5.862845 AGCTATCATTTCTGTCGAATCCAT 58.137 37.500 0.00 0.00 0.00 3.41
5880 6880 7.277174 TCTGAATAGCTATCATTTCTGTCGA 57.723 36.000 6.72 0.00 0.00 4.20
5883 6883 8.435187 TCCATTCTGAATAGCTATCATTTCTGT 58.565 33.333 6.72 0.00 0.00 3.41
5902 6902 9.869667 TCTTAGCTAGTAAGTAGAATCCATTCT 57.130 33.333 7.01 7.01 41.92 2.40
5919 6919 6.279513 ACTGCTATAGCCAATCTTAGCTAG 57.720 41.667 21.84 10.04 44.36 3.42
5920 6920 6.672266 AACTGCTATAGCCAATCTTAGCTA 57.328 37.500 21.84 0.00 45.17 3.32
5935 6935 6.537660 GTCCGGTTTAATCTGTAAACTGCTAT 59.462 38.462 0.00 0.00 40.57 2.97
5938 6938 4.453136 TGTCCGGTTTAATCTGTAAACTGC 59.547 41.667 0.00 2.10 40.57 4.40
5948 6948 3.424433 CGTTTGAGCTGTCCGGTTTAATC 60.424 47.826 0.00 0.00 0.00 1.75
5952 6952 1.782028 GCGTTTGAGCTGTCCGGTTT 61.782 55.000 0.00 0.00 0.00 3.27
5955 6955 2.664851 TGCGTTTGAGCTGTCCGG 60.665 61.111 0.00 0.00 38.13 5.14
5987 6987 3.614870 CGATTTCTGGCCCAAGAAAAAGG 60.615 47.826 19.06 9.70 46.37 3.11
5989 6989 2.298729 CCGATTTCTGGCCCAAGAAAAA 59.701 45.455 19.06 1.73 46.37 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.