Multiple sequence alignment - TraesCS5A01G445700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G445700 chr5A 100.000 4473 0 0 3853 8325 625735986 625731514 0.000000e+00 8261.0
1 TraesCS5A01G445700 chr5A 100.000 3300 0 0 1 3300 625739838 625736539 0.000000e+00 6095.0
2 TraesCS5A01G445700 chr5B 94.006 1902 97 7 6003 7903 629897540 629899425 0.000000e+00 2865.0
3 TraesCS5A01G445700 chr5B 94.217 1781 80 9 6003 7779 633176621 633174860 0.000000e+00 2697.0
4 TraesCS5A01G445700 chr5B 95.370 1620 73 2 6003 7620 623171583 623173202 0.000000e+00 2575.0
5 TraesCS5A01G445700 chr5B 95.309 1620 74 2 6003 7620 626842550 626844169 0.000000e+00 2569.0
6 TraesCS5A01G445700 chr5B 95.374 1578 69 3 6007 7581 625117368 625118944 0.000000e+00 2507.0
7 TraesCS5A01G445700 chr5B 95.311 1578 70 3 6007 7581 628696917 628698493 0.000000e+00 2501.0
8 TraesCS5A01G445700 chr5B 94.246 1599 66 10 965 2553 628694345 628695927 0.000000e+00 2420.0
9 TraesCS5A01G445700 chr5B 94.121 1599 72 7 965 2553 625114792 625116378 0.000000e+00 2412.0
10 TraesCS5A01G445700 chr5B 94.121 1599 68 11 965 2553 626837933 626839515 0.000000e+00 2409.0
11 TraesCS5A01G445700 chr5B 93.715 1607 67 12 965 2553 623166957 623168547 0.000000e+00 2377.0
12 TraesCS5A01G445700 chr5B 92.893 1604 80 13 965 2553 629895554 629897138 0.000000e+00 2300.0
13 TraesCS5A01G445700 chr5B 91.403 1582 70 24 850 2408 633179571 633178033 0.000000e+00 2108.0
14 TraesCS5A01G445700 chr5B 98.698 922 12 0 3853 4774 646247288 646248209 0.000000e+00 1637.0
15 TraesCS5A01G445700 chr5B 91.632 968 69 8 5046 6006 550523758 550522796 0.000000e+00 1328.0
16 TraesCS5A01G445700 chr5B 94.825 715 25 5 2588 3300 625116366 625117070 0.000000e+00 1105.0
17 TraesCS5A01G445700 chr5B 94.825 715 25 5 2588 3300 628695915 628696619 0.000000e+00 1105.0
18 TraesCS5A01G445700 chr5B 84.891 503 36 17 7617 8113 623176108 623176576 9.780000e-129 472.0
19 TraesCS5A01G445700 chr5B 84.891 503 36 17 7617 8113 626847074 626847542 9.780000e-129 472.0
20 TraesCS5A01G445700 chr5B 86.493 422 28 9 7712 8113 628700506 628700918 3.570000e-118 436.0
21 TraesCS5A01G445700 chr5B 86.256 422 29 9 7712 8113 625120957 625121369 1.660000e-116 431.0
22 TraesCS5A01G445700 chr5B 91.022 323 8 7 2589 2905 629897127 629897434 4.650000e-112 416.0
23 TraesCS5A01G445700 chr5B 94.096 271 15 1 4776 5046 625117091 625117360 2.160000e-110 411.0
24 TraesCS5A01G445700 chr5B 93.727 271 16 1 4776 5046 628696640 628696909 1.010000e-108 405.0
25 TraesCS5A01G445700 chr5B 90.441 272 21 3 4776 5046 633176892 633176625 3.700000e-93 353.0
26 TraesCS5A01G445700 chr5B 86.645 307 26 4 3007 3300 633177217 633176913 8.060000e-85 326.0
27 TraesCS5A01G445700 chr5B 85.306 245 4 9 2663 2905 623171263 623171477 3.020000e-54 224.0
28 TraesCS5A01G445700 chr5B 85.306 245 4 9 2663 2905 626842230 626842444 3.020000e-54 224.0
29 TraesCS5A01G445700 chr5B 95.370 108 5 0 14 121 633179702 633179595 1.110000e-38 172.0
30 TraesCS5A01G445700 chr5B 97.959 98 2 0 4949 5046 623171482 623171579 4.000000e-38 171.0
31 TraesCS5A01G445700 chr5B 97.959 98 2 0 4949 5046 626842449 626842546 4.000000e-38 171.0
32 TraesCS5A01G445700 chr5B 97.959 98 2 0 4949 5046 629897439 629897536 4.000000e-38 171.0
33 TraesCS5A01G445700 chr5B 92.771 83 6 0 499 581 361435181 361435099 4.080000e-23 121.0
34 TraesCS5A01G445700 chr5B 95.890 73 3 0 424 496 629649821 629649893 1.470000e-22 119.0
35 TraesCS5A01G445700 chr5B 76.066 305 30 19 8020 8320 629899409 629899674 1.470000e-22 119.0
36 TraesCS5A01G445700 chr5B 79.096 177 23 6 8144 8320 623176573 623176735 8.830000e-20 110.0
37 TraesCS5A01G445700 chr5B 79.096 177 23 6 8144 8320 626847539 626847701 8.830000e-20 110.0
38 TraesCS5A01G445700 chr6B 99.029 927 9 0 3853 4779 527577799 527576873 0.000000e+00 1663.0
39 TraesCS5A01G445700 chr6B 79.122 934 187 5 6375 7304 714330625 714329696 9.110000e-179 638.0
40 TraesCS5A01G445700 chr6B 83.007 153 26 0 1175 1327 714336603 714336451 1.130000e-28 139.0
41 TraesCS5A01G445700 chr6B 84.746 118 17 1 4840 4956 204946656 204946773 5.280000e-22 117.0
42 TraesCS5A01G445700 chr4B 98.712 932 12 0 3853 4784 661204881 661203950 0.000000e+00 1655.0
43 TraesCS5A01G445700 chr3B 98.708 929 12 0 3853 4781 82042063 82041135 0.000000e+00 1650.0
44 TraesCS5A01G445700 chr3B 98.703 925 12 0 3853 4777 748457239 748456315 0.000000e+00 1642.0
45 TraesCS5A01G445700 chr3B 98.596 926 13 0 3853 4778 78548598 78549523 0.000000e+00 1639.0
46 TraesCS5A01G445700 chr3B 79.439 107 22 0 8217 8323 765563603 765563497 8.960000e-10 76.8
47 TraesCS5A01G445700 chr3A 98.707 928 9 3 3856 4782 670850862 670849937 0.000000e+00 1644.0
48 TraesCS5A01G445700 chr3A 83.654 104 17 0 8217 8320 7129313 7129416 1.910000e-16 99.0
49 TraesCS5A01G445700 chr3A 82.143 112 20 0 8213 8324 628158112 628158223 6.880000e-16 97.1
50 TraesCS5A01G445700 chr7B 98.807 922 11 0 3853 4774 744907689 744908610 0.000000e+00 1642.0
51 TraesCS5A01G445700 chr7B 93.498 969 52 8 5046 6006 749561421 749560456 0.000000e+00 1430.0
52 TraesCS5A01G445700 chr7B 95.890 73 3 0 424 496 399892964 399892892 1.470000e-22 119.0
53 TraesCS5A01G445700 chr7B 79.630 108 22 0 8217 8324 622611935 622612042 2.490000e-10 78.7
54 TraesCS5A01G445700 chrUn 98.698 922 12 0 3853 4774 449433653 449434574 0.000000e+00 1637.0
55 TraesCS5A01G445700 chrUn 95.330 364 17 0 6003 6366 349939221 349939584 5.600000e-161 579.0
56 TraesCS5A01G445700 chrUn 95.330 364 17 0 6003 6366 349941514 349941877 5.600000e-161 579.0
57 TraesCS5A01G445700 chrUn 85.306 245 4 9 2663 2905 349938901 349939115 3.020000e-54 224.0
58 TraesCS5A01G445700 chrUn 85.306 245 4 9 2663 2905 349941194 349941408 3.020000e-54 224.0
59 TraesCS5A01G445700 chrUn 97.959 98 2 0 4949 5046 349939120 349939217 4.000000e-38 171.0
60 TraesCS5A01G445700 chrUn 97.959 98 2 0 4949 5046 349941413 349941510 4.000000e-38 171.0
61 TraesCS5A01G445700 chrUn 76.978 139 24 5 2251 2385 211921307 211921441 1.160000e-08 73.1
62 TraesCS5A01G445700 chr7D 94.502 964 43 7 5047 6003 423334622 423335582 0.000000e+00 1478.0
63 TraesCS5A01G445700 chr7D 83.889 180 11 3 420 581 29807290 29807469 1.120000e-33 156.0
64 TraesCS5A01G445700 chr2A 94.306 966 48 5 5046 6006 27321716 27320753 0.000000e+00 1472.0
65 TraesCS5A01G445700 chr2A 86.333 300 35 3 126 419 390649165 390648866 1.040000e-83 322.0
66 TraesCS5A01G445700 chr2A 76.190 336 46 18 1769 2086 77538300 77538619 6.730000e-31 147.0
67 TraesCS5A01G445700 chr2A 90.588 85 7 1 496 579 194715915 194715999 2.460000e-20 111.0
68 TraesCS5A01G445700 chr1D 94.374 871 40 6 5113 5976 332211358 332212226 0.000000e+00 1328.0
69 TraesCS5A01G445700 chr1D 86.184 304 34 5 123 419 301954010 301954312 1.040000e-83 322.0
70 TraesCS5A01G445700 chr1D 87.692 260 29 3 123 379 441096814 441096555 4.880000e-77 300.0
71 TraesCS5A01G445700 chr1D 84.358 179 10 6 419 579 2720407 2720229 8.650000e-35 159.0
72 TraesCS5A01G445700 chr1D 86.538 104 14 0 8217 8320 373114234 373114337 1.900000e-21 115.0
73 TraesCS5A01G445700 chr1D 85.227 88 13 0 8219 8306 362515835 362515748 3.200000e-14 91.6
74 TraesCS5A01G445700 chr2D 90.296 979 70 15 5046 6001 33298591 33299567 0.000000e+00 1258.0
75 TraesCS5A01G445700 chr2D 75.749 334 49 17 1769 2086 76871677 76871994 1.130000e-28 139.0
76 TraesCS5A01G445700 chr2D 93.103 87 6 0 496 582 626585866 626585952 2.440000e-25 128.0
77 TraesCS5A01G445700 chr7A 91.048 849 62 8 5091 5927 727305260 727306106 0.000000e+00 1134.0
78 TraesCS5A01G445700 chr7A 91.048 849 61 9 5091 5927 727279342 727280187 0.000000e+00 1133.0
79 TraesCS5A01G445700 chr7A 89.245 781 50 17 5196 5963 100620883 100620124 0.000000e+00 946.0
80 TraesCS5A01G445700 chr7A 86.139 303 36 3 123 419 337600371 337600673 1.040000e-83 322.0
81 TraesCS5A01G445700 chr6A 83.013 1042 165 11 6297 7331 32898759 32897723 0.000000e+00 933.0
82 TraesCS5A01G445700 chr6A 76.909 1074 166 48 1075 2086 32900824 32899771 1.230000e-147 534.0
83 TraesCS5A01G445700 chr6A 88.672 256 25 4 126 379 516833036 516832783 8.120000e-80 309.0
84 TraesCS5A01G445700 chr6D 82.964 1039 165 11 6297 7328 29771042 29772075 0.000000e+00 928.0
85 TraesCS5A01G445700 chr6D 79.259 945 190 5 6333 7274 468168732 468167791 0.000000e+00 654.0
86 TraesCS5A01G445700 chr6D 78.143 1066 152 42 1075 2086 29768994 29770032 3.320000e-168 603.0
87 TraesCS5A01G445700 chr6D 82.902 193 33 0 2195 2387 29770116 29770308 3.090000e-39 174.0
88 TraesCS5A01G445700 chr6D 82.418 182 13 4 420 582 60494533 60494352 3.130000e-29 141.0
89 TraesCS5A01G445700 chr6D 77.953 127 20 5 2266 2388 468183371 468183249 1.160000e-08 73.1
90 TraesCS5A01G445700 chr5D 82.316 786 117 17 5047 5824 565699645 565698874 0.000000e+00 662.0
91 TraesCS5A01G445700 chr5D 87.583 451 40 9 7671 8113 297089550 297089108 7.450000e-140 508.0
92 TraesCS5A01G445700 chr5D 87.500 384 34 8 7259 7631 297092972 297092592 1.660000e-116 431.0
93 TraesCS5A01G445700 chr5D 88.552 297 33 1 123 418 255865151 255864855 7.940000e-95 359.0
94 TraesCS5A01G445700 chr5D 93.671 79 4 1 419 496 540003048 540003126 5.280000e-22 117.0
95 TraesCS5A01G445700 chr4D 85.953 299 35 5 126 422 360765997 360765704 6.270000e-81 313.0
96 TraesCS5A01G445700 chr4D 95.946 74 2 1 424 496 62477122 62477049 1.470000e-22 119.0
97 TraesCS5A01G445700 chr4D 93.750 80 4 1 418 496 315271988 315271909 1.470000e-22 119.0
98 TraesCS5A01G445700 chr4D 94.737 76 4 0 421 496 385151441 385151516 1.470000e-22 119.0
99 TraesCS5A01G445700 chr4D 91.566 83 7 0 496 578 503512063 503512145 1.900000e-21 115.0
100 TraesCS5A01G445700 chr2B 85.570 298 38 3 126 422 481474906 481474613 2.920000e-79 307.0
101 TraesCS5A01G445700 chr2B 83.069 189 12 5 410 579 354689990 354689803 4.020000e-33 154.0
102 TraesCS5A01G445700 chr2B 76.119 335 48 16 1769 2087 118630286 118630604 6.730000e-31 147.0
103 TraesCS5A01G445700 chr2B 92.857 84 6 0 496 579 71877187 71877270 1.130000e-23 122.0
104 TraesCS5A01G445700 chr1A 86.111 288 33 4 138 422 581029327 581029610 3.780000e-78 303.0
105 TraesCS5A01G445700 chr3D 88.073 109 12 1 8217 8324 481917640 481917748 2.440000e-25 128.0
106 TraesCS5A01G445700 chr3D 94.937 79 4 0 499 577 186624364 186624286 3.150000e-24 124.0
107 TraesCS5A01G445700 chr3D 91.667 84 7 0 496 579 590073259 590073342 5.280000e-22 117.0
108 TraesCS5A01G445700 chr3D 92.593 81 4 2 418 496 3542075 3541995 1.900000e-21 115.0
109 TraesCS5A01G445700 chr4A 86.905 84 10 1 8219 8302 735874474 735874392 8.900000e-15 93.5
110 TraesCS5A01G445700 chr1B 81.250 112 18 1 8213 8324 10553366 10553474 4.140000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G445700 chr5A 625731514 625739838 8324 True 7178.000000 8261 100.000000 1 8325 2 chr5A.!!$R1 8324
1 TraesCS5A01G445700 chr5B 646247288 646248209 921 False 1637.000000 1637 98.698000 3853 4774 1 chr5B.!!$F2 921
2 TraesCS5A01G445700 chr5B 628694345 628700918 6573 False 1373.400000 2501 92.920400 965 8113 5 chr5B.!!$F6 7148
3 TraesCS5A01G445700 chr5B 625114792 625121369 6577 False 1373.200000 2507 92.934400 965 8113 5 chr5B.!!$F4 7148
4 TraesCS5A01G445700 chr5B 550522796 550523758 962 True 1328.000000 1328 91.632000 5046 6006 1 chr5B.!!$R2 960
5 TraesCS5A01G445700 chr5B 629895554 629899674 4120 False 1174.200000 2865 90.389200 965 8320 5 chr5B.!!$F7 7355
6 TraesCS5A01G445700 chr5B 633174860 633179702 4842 True 1131.200000 2697 91.615200 14 7779 5 chr5B.!!$R3 7765
7 TraesCS5A01G445700 chr5B 626837933 626847701 9768 False 992.500000 2569 89.447000 965 8320 6 chr5B.!!$F5 7355
8 TraesCS5A01G445700 chr5B 623166957 623176735 9778 False 988.166667 2575 89.389500 965 8320 6 chr5B.!!$F3 7355
9 TraesCS5A01G445700 chr6B 527576873 527577799 926 True 1663.000000 1663 99.029000 3853 4779 1 chr6B.!!$R1 926
10 TraesCS5A01G445700 chr6B 714329696 714330625 929 True 638.000000 638 79.122000 6375 7304 1 chr6B.!!$R2 929
11 TraesCS5A01G445700 chr4B 661203950 661204881 931 True 1655.000000 1655 98.712000 3853 4784 1 chr4B.!!$R1 931
12 TraesCS5A01G445700 chr3B 82041135 82042063 928 True 1650.000000 1650 98.708000 3853 4781 1 chr3B.!!$R1 928
13 TraesCS5A01G445700 chr3B 748456315 748457239 924 True 1642.000000 1642 98.703000 3853 4777 1 chr3B.!!$R2 924
14 TraesCS5A01G445700 chr3B 78548598 78549523 925 False 1639.000000 1639 98.596000 3853 4778 1 chr3B.!!$F1 925
15 TraesCS5A01G445700 chr3A 670849937 670850862 925 True 1644.000000 1644 98.707000 3856 4782 1 chr3A.!!$R1 926
16 TraesCS5A01G445700 chr7B 744907689 744908610 921 False 1642.000000 1642 98.807000 3853 4774 1 chr7B.!!$F2 921
17 TraesCS5A01G445700 chr7B 749560456 749561421 965 True 1430.000000 1430 93.498000 5046 6006 1 chr7B.!!$R2 960
18 TraesCS5A01G445700 chrUn 449433653 449434574 921 False 1637.000000 1637 98.698000 3853 4774 1 chrUn.!!$F2 921
19 TraesCS5A01G445700 chrUn 349938901 349941877 2976 False 324.666667 579 92.865000 2663 6366 6 chrUn.!!$F3 3703
20 TraesCS5A01G445700 chr7D 423334622 423335582 960 False 1478.000000 1478 94.502000 5047 6003 1 chr7D.!!$F2 956
21 TraesCS5A01G445700 chr2A 27320753 27321716 963 True 1472.000000 1472 94.306000 5046 6006 1 chr2A.!!$R1 960
22 TraesCS5A01G445700 chr1D 332211358 332212226 868 False 1328.000000 1328 94.374000 5113 5976 1 chr1D.!!$F2 863
23 TraesCS5A01G445700 chr2D 33298591 33299567 976 False 1258.000000 1258 90.296000 5046 6001 1 chr2D.!!$F1 955
24 TraesCS5A01G445700 chr7A 727305260 727306106 846 False 1134.000000 1134 91.048000 5091 5927 1 chr7A.!!$F3 836
25 TraesCS5A01G445700 chr7A 727279342 727280187 845 False 1133.000000 1133 91.048000 5091 5927 1 chr7A.!!$F2 836
26 TraesCS5A01G445700 chr7A 100620124 100620883 759 True 946.000000 946 89.245000 5196 5963 1 chr7A.!!$R1 767
27 TraesCS5A01G445700 chr6A 32897723 32900824 3101 True 733.500000 933 79.961000 1075 7331 2 chr6A.!!$R2 6256
28 TraesCS5A01G445700 chr6D 468167791 468168732 941 True 654.000000 654 79.259000 6333 7274 1 chr6D.!!$R2 941
29 TraesCS5A01G445700 chr6D 29768994 29772075 3081 False 568.333333 928 81.336333 1075 7328 3 chr6D.!!$F1 6253
30 TraesCS5A01G445700 chr5D 565698874 565699645 771 True 662.000000 662 82.316000 5047 5824 1 chr5D.!!$R2 777
31 TraesCS5A01G445700 chr5D 297089108 297092972 3864 True 469.500000 508 87.541500 7259 8113 2 chr5D.!!$R3 854

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
444 445 0.108019 GGTGTTTGGTTCCCGAGACT 59.892 55.000 0.00 0.00 0.00 3.24 F
837 838 0.254747 CCATCCTAGACCGGCCAAAA 59.745 55.000 0.00 0.00 0.00 2.44 F
2093 2221 0.318762 GGATGCCGAGGTACCATCTC 59.681 60.000 15.94 1.71 36.49 2.75 F
2596 3166 0.327924 TTGAGTGGCTGGGTACATGG 59.672 55.000 0.00 0.00 0.00 3.66 F
2597 3167 0.546507 TGAGTGGCTGGGTACATGGA 60.547 55.000 0.00 0.00 0.00 3.41 F
2656 3254 1.376466 GCTCAAGACAGGCCCAGAA 59.624 57.895 0.00 0.00 0.00 3.02 F
3254 6647 2.290323 GCAGGGTAGCTTCTCCTTTCAA 60.290 50.000 0.00 0.00 0.00 2.69 F
4391 7784 2.305927 AGAAATCCATGTCGGGTCTTGT 59.694 45.455 0.00 0.00 34.36 3.16 F
5307 8709 2.756760 GCACCAACCATCTCATGACAAT 59.243 45.455 0.00 0.00 0.00 2.71 F
5950 9383 0.460109 GAACAAATCCATTGCCCGGC 60.460 55.000 1.04 1.04 43.13 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2294 2430 0.609957 TTCCTGGCTTGCATGGACAG 60.610 55.000 14.05 14.05 39.38 3.51 R
2581 3151 0.037590 TTGTCCATGTACCCAGCCAC 59.962 55.000 0.00 0.00 0.00 5.01 R
3941 7334 0.178958 CGTAGGGCCTAGATCTGGGT 60.179 60.000 24.55 9.23 33.26 4.51 R
4666 8060 5.285651 CACGCCCAAAAGAAATAACAAGAA 58.714 37.500 0.00 0.00 0.00 2.52 R
4774 8168 7.013274 TGAGGACCTTTTACTTTGATGAGTTTG 59.987 37.037 0.00 0.00 0.00 2.93 R
4788 8182 0.034337 AAGCGCGTGAGGACCTTTTA 59.966 50.000 8.43 0.00 0.00 1.52 R
4916 8310 3.325135 CCATCCTAATCGTTTAGAGGCCT 59.675 47.826 3.86 3.86 37.59 5.19 R
5526 8948 1.133761 AGCACCTAGTATCGAGCTCCA 60.134 52.381 8.47 0.00 0.00 3.86 R
6520 9958 1.252904 TACCGAACCCACCTCTTCCG 61.253 60.000 0.00 0.00 0.00 4.30 R
8128 18302 0.037326 TGGCTGGAACGCAACTCTAG 60.037 55.000 0.00 0.00 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.075005 GGGTAGCAGCGGGACTCA 61.075 66.667 0.00 0.00 0.00 3.41
86 87 1.217244 CGAAGGGTGGGTTCCTACG 59.783 63.158 0.00 0.00 33.58 3.51
87 88 1.538687 CGAAGGGTGGGTTCCTACGT 61.539 60.000 0.00 0.00 33.58 3.57
105 106 1.602311 GTGCTTCTGGCCATAGGATG 58.398 55.000 5.51 3.78 40.92 3.51
121 122 1.001393 ATGCCCCCAATCGAACGTT 60.001 52.632 0.00 0.00 0.00 3.99
123 124 1.673009 GCCCCCAATCGAACGTTCA 60.673 57.895 26.71 14.74 0.00 3.18
124 125 1.029947 GCCCCCAATCGAACGTTCAT 61.030 55.000 26.71 16.22 0.00 2.57
126 127 1.448985 CCCCAATCGAACGTTCATGT 58.551 50.000 26.71 9.86 0.00 3.21
128 129 2.350498 CCCCAATCGAACGTTCATGTAC 59.650 50.000 26.71 0.56 0.00 2.90
130 131 2.350498 CCAATCGAACGTTCATGTACCC 59.650 50.000 26.71 0.00 0.00 3.69
131 132 3.259064 CAATCGAACGTTCATGTACCCT 58.741 45.455 26.71 2.63 0.00 4.34
132 133 4.426416 CAATCGAACGTTCATGTACCCTA 58.574 43.478 26.71 2.13 0.00 3.53
133 134 3.492421 TCGAACGTTCATGTACCCTAC 57.508 47.619 26.71 0.00 0.00 3.18
134 135 2.159531 TCGAACGTTCATGTACCCTACG 60.160 50.000 26.71 9.86 38.14 3.51
135 136 2.533266 GAACGTTCATGTACCCTACGG 58.467 52.381 23.12 0.00 36.60 4.02
151 152 5.614308 CCCTACGGGTAAAAACCTATTAGG 58.386 45.833 8.25 8.25 38.71 2.69
152 153 5.455183 CCCTACGGGTAAAAACCTATTAGGG 60.455 48.000 14.26 15.35 37.67 3.53
153 154 5.130975 CCTACGGGTAAAAACCTATTAGGGT 59.869 44.000 14.26 4.36 36.34 4.34
154 155 6.326323 CCTACGGGTAAAAACCTATTAGGGTA 59.674 42.308 14.26 2.89 30.80 3.69
156 157 6.653020 ACGGGTAAAAACCTATTAGGGTAAG 58.347 40.000 14.26 0.00 30.80 2.34
157 158 6.443527 ACGGGTAAAAACCTATTAGGGTAAGA 59.556 38.462 14.26 0.00 30.80 2.10
158 159 6.988580 CGGGTAAAAACCTATTAGGGTAAGAG 59.011 42.308 14.26 0.00 30.80 2.85
159 160 6.769822 GGGTAAAAACCTATTAGGGTAAGAGC 59.230 42.308 14.26 5.71 30.80 4.09
163 164 5.568620 AACCTATTAGGGTAAGAGCATGG 57.431 43.478 14.26 0.00 40.58 3.66
164 165 3.910627 ACCTATTAGGGTAAGAGCATGGG 59.089 47.826 14.26 0.00 40.58 4.00
165 166 4.168101 CCTATTAGGGTAAGAGCATGGGA 58.832 47.826 1.37 0.00 0.00 4.37
166 167 4.020128 CCTATTAGGGTAAGAGCATGGGAC 60.020 50.000 1.37 0.00 0.00 4.46
167 168 8.821127 ACCTATTAGGGTAAGAGCATGGGACA 62.821 46.154 14.26 0.00 41.77 4.02
182 183 4.881019 TGGGACAAAACATTACCAATGG 57.119 40.909 0.00 0.00 38.31 3.16
183 184 3.580458 TGGGACAAAACATTACCAATGGG 59.420 43.478 3.55 0.00 38.31 4.00
184 185 4.941793 TGGGACAAAACATTACCAATGGGT 60.942 41.667 3.55 0.00 44.35 4.51
185 186 5.695766 TGGGACAAAACATTACCAATGGGTA 60.696 40.000 3.55 0.00 40.76 3.69
214 215 7.545362 AATAGACAAATCTCAAACTCATCGG 57.455 36.000 0.00 0.00 36.29 4.18
215 216 4.256920 AGACAAATCTCAAACTCATCGGG 58.743 43.478 0.00 0.00 0.00 5.14
217 218 5.046591 AGACAAATCTCAAACTCATCGGGTA 60.047 40.000 0.00 0.00 0.00 3.69
218 219 4.935808 ACAAATCTCAAACTCATCGGGTAC 59.064 41.667 0.00 0.00 0.00 3.34
220 221 4.819105 ATCTCAAACTCATCGGGTACAA 57.181 40.909 0.00 0.00 0.00 2.41
221 222 3.921677 TCTCAAACTCATCGGGTACAAC 58.078 45.455 0.00 0.00 0.00 3.32
222 223 3.322541 TCTCAAACTCATCGGGTACAACA 59.677 43.478 0.00 0.00 0.00 3.33
223 224 3.659786 TCAAACTCATCGGGTACAACAG 58.340 45.455 0.00 0.00 0.00 3.16
224 225 2.742053 CAAACTCATCGGGTACAACAGG 59.258 50.000 0.00 0.00 0.00 4.00
225 226 1.640917 ACTCATCGGGTACAACAGGT 58.359 50.000 0.00 0.00 0.00 4.00
226 227 2.811410 ACTCATCGGGTACAACAGGTA 58.189 47.619 0.00 0.00 0.00 3.08
227 228 3.167485 ACTCATCGGGTACAACAGGTAA 58.833 45.455 0.00 0.00 32.72 2.85
228 229 3.194968 ACTCATCGGGTACAACAGGTAAG 59.805 47.826 0.00 0.00 32.72 2.34
229 230 2.498481 TCATCGGGTACAACAGGTAAGG 59.502 50.000 0.00 0.00 32.72 2.69
230 231 2.014010 TCGGGTACAACAGGTAAGGT 57.986 50.000 0.00 0.00 32.72 3.50
231 232 2.328319 TCGGGTACAACAGGTAAGGTT 58.672 47.619 0.00 0.00 32.72 3.50
232 233 3.505386 TCGGGTACAACAGGTAAGGTTA 58.495 45.455 0.00 0.00 32.72 2.85
233 234 4.095946 TCGGGTACAACAGGTAAGGTTAT 58.904 43.478 0.00 0.00 32.72 1.89
234 235 4.081531 TCGGGTACAACAGGTAAGGTTATG 60.082 45.833 0.00 0.00 32.72 1.90
235 236 4.520179 GGGTACAACAGGTAAGGTTATGG 58.480 47.826 0.00 0.00 32.72 2.74
236 237 4.520179 GGTACAACAGGTAAGGTTATGGG 58.480 47.826 0.00 0.00 32.72 4.00
237 238 4.225717 GGTACAACAGGTAAGGTTATGGGA 59.774 45.833 0.00 0.00 32.72 4.37
238 239 5.104235 GGTACAACAGGTAAGGTTATGGGAT 60.104 44.000 0.00 0.00 32.72 3.85
239 240 5.112129 ACAACAGGTAAGGTTATGGGATC 57.888 43.478 0.00 0.00 0.00 3.36
240 241 4.538490 ACAACAGGTAAGGTTATGGGATCA 59.462 41.667 0.00 0.00 0.00 2.92
241 242 4.772886 ACAGGTAAGGTTATGGGATCAC 57.227 45.455 0.00 0.00 0.00 3.06
242 243 4.108570 ACAGGTAAGGTTATGGGATCACA 58.891 43.478 0.00 0.00 0.00 3.58
252 253 6.743575 GTTATGGGATCACATAAGCCATAC 57.256 41.667 27.09 13.73 42.24 2.39
253 254 3.788227 TGGGATCACATAAGCCATACC 57.212 47.619 0.00 0.00 0.00 2.73
255 256 2.615493 GGGATCACATAAGCCATACCCG 60.615 54.545 0.00 0.00 0.00 5.28
256 257 2.076863 GATCACATAAGCCATACCCGC 58.923 52.381 0.00 0.00 0.00 6.13
257 258 0.249699 TCACATAAGCCATACCCGCG 60.250 55.000 0.00 0.00 0.00 6.46
258 259 0.531974 CACATAAGCCATACCCGCGT 60.532 55.000 4.92 0.00 0.00 6.01
259 260 1.042229 ACATAAGCCATACCCGCGTA 58.958 50.000 4.92 0.00 0.00 4.42
260 261 1.269936 ACATAAGCCATACCCGCGTAC 60.270 52.381 4.92 0.00 0.00 3.67
261 262 0.319405 ATAAGCCATACCCGCGTACC 59.681 55.000 4.92 0.00 0.00 3.34
265 266 1.301401 CCATACCCGCGTACCCATG 60.301 63.158 4.92 0.93 0.00 3.66
266 267 1.444250 CATACCCGCGTACCCATGT 59.556 57.895 4.92 0.00 0.00 3.21
269 270 1.391157 TACCCGCGTACCCATGTACC 61.391 60.000 4.92 0.00 43.69 3.34
270 271 2.107546 CCGCGTACCCATGTACCC 59.892 66.667 4.92 0.00 43.69 3.69
272 273 1.518774 CGCGTACCCATGTACCCTT 59.481 57.895 0.00 0.00 43.69 3.95
273 274 0.746063 CGCGTACCCATGTACCCTTA 59.254 55.000 0.00 0.00 43.69 2.69
274 275 1.342174 CGCGTACCCATGTACCCTTAT 59.658 52.381 0.00 0.00 43.69 1.73
275 276 2.557924 CGCGTACCCATGTACCCTTATA 59.442 50.000 0.00 0.00 43.69 0.98
276 277 3.005684 CGCGTACCCATGTACCCTTATAA 59.994 47.826 0.00 0.00 43.69 0.98
277 278 4.501229 CGCGTACCCATGTACCCTTATAAA 60.501 45.833 0.00 0.00 43.69 1.40
279 280 5.999600 GCGTACCCATGTACCCTTATAAAAT 59.000 40.000 0.00 0.00 43.69 1.82
281 282 7.447594 CGTACCCATGTACCCTTATAAAATCT 58.552 38.462 0.00 0.00 43.69 2.40
282 283 8.587608 CGTACCCATGTACCCTTATAAAATCTA 58.412 37.037 0.00 0.00 43.69 1.98
285 286 8.783903 ACCCATGTACCCTTATAAAATCTAACA 58.216 33.333 0.00 0.00 0.00 2.41
286 287 9.635404 CCCATGTACCCTTATAAAATCTAACAA 57.365 33.333 0.00 0.00 0.00 2.83
334 335 9.868277 ATTTTGTCATGAGTTTGTCAACTTAAA 57.132 25.926 0.00 0.00 43.79 1.52
335 336 9.698309 TTTTGTCATGAGTTTGTCAACTTAAAA 57.302 25.926 0.00 0.00 43.79 1.52
337 338 8.854979 TGTCATGAGTTTGTCAACTTAAAATG 57.145 30.769 0.00 0.00 43.79 2.32
338 339 8.465999 TGTCATGAGTTTGTCAACTTAAAATGT 58.534 29.630 0.00 0.00 43.79 2.71
339 340 9.944663 GTCATGAGTTTGTCAACTTAAAATGTA 57.055 29.630 0.00 0.00 43.79 2.29
343 344 9.944663 TGAGTTTGTCAACTTAAAATGTATGAC 57.055 29.630 0.00 0.00 43.79 3.06
425 426 9.952030 ATAAAATGGGTTGTTGTTTATAAAGGG 57.048 29.630 0.00 0.00 0.00 3.95
426 427 6.367374 AATGGGTTGTTGTTTATAAAGGGG 57.633 37.500 0.00 0.00 0.00 4.79
428 429 4.589374 TGGGTTGTTGTTTATAAAGGGGTG 59.411 41.667 0.00 0.00 0.00 4.61
429 430 4.589798 GGGTTGTTGTTTATAAAGGGGTGT 59.410 41.667 0.00 0.00 0.00 4.16
430 431 5.070714 GGGTTGTTGTTTATAAAGGGGTGTT 59.929 40.000 0.00 0.00 0.00 3.32
431 432 6.408320 GGGTTGTTGTTTATAAAGGGGTGTTT 60.408 38.462 0.00 0.00 0.00 2.83
432 433 6.480651 GGTTGTTGTTTATAAAGGGGTGTTTG 59.519 38.462 0.00 0.00 0.00 2.93
433 434 6.163135 TGTTGTTTATAAAGGGGTGTTTGG 57.837 37.500 0.00 0.00 0.00 3.28
434 435 5.661759 TGTTGTTTATAAAGGGGTGTTTGGT 59.338 36.000 0.00 0.00 0.00 3.67
435 436 6.156429 TGTTGTTTATAAAGGGGTGTTTGGTT 59.844 34.615 0.00 0.00 0.00 3.67
436 437 6.408107 TGTTTATAAAGGGGTGTTTGGTTC 57.592 37.500 0.00 0.00 0.00 3.62
437 438 5.304871 TGTTTATAAAGGGGTGTTTGGTTCC 59.695 40.000 0.00 0.00 0.00 3.62
438 439 2.385135 TAAAGGGGTGTTTGGTTCCC 57.615 50.000 0.00 0.00 40.41 3.97
439 440 0.757561 AAAGGGGTGTTTGGTTCCCG 60.758 55.000 0.00 0.00 43.92 5.14
440 441 1.647334 AAGGGGTGTTTGGTTCCCGA 61.647 55.000 0.00 0.00 43.92 5.14
441 442 1.602605 GGGGTGTTTGGTTCCCGAG 60.603 63.158 0.00 0.00 41.92 4.63
442 443 1.452801 GGGTGTTTGGTTCCCGAGA 59.547 57.895 0.00 0.00 0.00 4.04
444 445 0.108019 GGTGTTTGGTTCCCGAGACT 59.892 55.000 0.00 0.00 0.00 3.24
445 446 1.476291 GGTGTTTGGTTCCCGAGACTT 60.476 52.381 0.00 0.00 0.00 3.01
446 447 2.294979 GTGTTTGGTTCCCGAGACTTT 58.705 47.619 0.00 0.00 0.00 2.66
447 448 2.686405 GTGTTTGGTTCCCGAGACTTTT 59.314 45.455 0.00 0.00 0.00 2.27
448 449 3.129813 GTGTTTGGTTCCCGAGACTTTTT 59.870 43.478 0.00 0.00 0.00 1.94
449 450 3.129638 TGTTTGGTTCCCGAGACTTTTTG 59.870 43.478 0.00 0.00 0.00 2.44
450 451 2.721425 TGGTTCCCGAGACTTTTTGT 57.279 45.000 0.00 0.00 0.00 2.83
451 452 2.294074 TGGTTCCCGAGACTTTTTGTG 58.706 47.619 0.00 0.00 0.00 3.33
452 453 2.294979 GGTTCCCGAGACTTTTTGTGT 58.705 47.619 0.00 0.00 0.00 3.72
454 455 3.488553 GGTTCCCGAGACTTTTTGTGTTG 60.489 47.826 0.00 0.00 0.00 3.33
455 456 2.294074 TCCCGAGACTTTTTGTGTTGG 58.706 47.619 0.00 0.00 41.75 3.77
456 457 2.774439 CCGAGACTTTTTGTGTTGGG 57.226 50.000 0.00 0.00 39.23 4.12
457 458 2.294074 CCGAGACTTTTTGTGTTGGGA 58.706 47.619 0.00 0.00 39.23 4.37
458 459 2.032924 CCGAGACTTTTTGTGTTGGGAC 59.967 50.000 0.00 0.00 39.23 4.46
461 462 4.211374 CGAGACTTTTTGTGTTGGGACTAG 59.789 45.833 0.00 0.00 0.00 2.57
463 464 5.751586 AGACTTTTTGTGTTGGGACTAGAA 58.248 37.500 0.00 0.00 0.00 2.10
464 465 6.184789 AGACTTTTTGTGTTGGGACTAGAAA 58.815 36.000 0.00 0.00 0.00 2.52
465 466 6.661805 AGACTTTTTGTGTTGGGACTAGAAAA 59.338 34.615 0.00 0.00 0.00 2.29
466 467 7.177744 AGACTTTTTGTGTTGGGACTAGAAAAA 59.822 33.333 0.00 0.00 0.00 1.94
467 468 7.320399 ACTTTTTGTGTTGGGACTAGAAAAAG 58.680 34.615 14.09 14.09 39.12 2.27
469 470 6.445357 TTTGTGTTGGGACTAGAAAAAGTC 57.555 37.500 0.00 0.00 44.31 3.01
480 481 7.310072 GACTAGAAAAAGTCCCTAGCAAATC 57.690 40.000 0.00 0.00 40.06 2.17
481 482 6.779860 ACTAGAAAAAGTCCCTAGCAAATCA 58.220 36.000 0.00 0.00 34.70 2.57
482 483 7.231467 ACTAGAAAAAGTCCCTAGCAAATCAA 58.769 34.615 0.00 0.00 34.70 2.57
483 484 6.976934 AGAAAAAGTCCCTAGCAAATCAAA 57.023 33.333 0.00 0.00 0.00 2.69
485 486 6.323739 AGAAAAAGTCCCTAGCAAATCAAACA 59.676 34.615 0.00 0.00 0.00 2.83
487 488 3.690460 AGTCCCTAGCAAATCAAACAGG 58.310 45.455 0.00 0.00 0.00 4.00
488 489 2.755103 GTCCCTAGCAAATCAAACAGGG 59.245 50.000 0.00 0.00 43.52 4.45
490 491 2.493278 CCCTAGCAAATCAAACAGGGTG 59.507 50.000 0.00 0.00 38.34 4.61
492 493 1.341080 AGCAAATCAAACAGGGTGGG 58.659 50.000 0.00 0.00 0.00 4.61
494 495 1.000843 GCAAATCAAACAGGGTGGGAC 59.999 52.381 0.00 0.00 0.00 4.46
495 496 2.597455 CAAATCAAACAGGGTGGGACT 58.403 47.619 0.00 0.00 0.00 3.85
496 497 3.761897 CAAATCAAACAGGGTGGGACTA 58.238 45.455 0.00 0.00 0.00 2.59
497 498 4.148838 CAAATCAAACAGGGTGGGACTAA 58.851 43.478 0.00 0.00 0.00 2.24
499 500 3.955524 TCAAACAGGGTGGGACTAAAA 57.044 42.857 0.00 0.00 0.00 1.52
500 501 3.827722 TCAAACAGGGTGGGACTAAAAG 58.172 45.455 0.00 0.00 0.00 2.27
501 502 2.287977 AACAGGGTGGGACTAAAAGC 57.712 50.000 0.00 0.00 0.00 3.51
502 503 1.145571 ACAGGGTGGGACTAAAAGCA 58.854 50.000 0.00 0.00 0.00 3.91
503 504 1.202891 ACAGGGTGGGACTAAAAGCAC 60.203 52.381 0.00 0.00 0.00 4.40
505 506 0.404426 GGGTGGGACTAAAAGCACCT 59.596 55.000 0.00 0.00 29.96 4.00
506 507 1.613520 GGGTGGGACTAAAAGCACCTC 60.614 57.143 0.00 0.00 29.96 3.85
507 508 1.351350 GGTGGGACTAAAAGCACCTCT 59.649 52.381 0.00 0.00 0.00 3.69
508 509 2.224793 GGTGGGACTAAAAGCACCTCTT 60.225 50.000 0.00 0.00 36.34 2.85
510 511 3.253432 GTGGGACTAAAAGCACCTCTTTG 59.747 47.826 0.00 0.00 43.84 2.77
511 512 3.137544 TGGGACTAAAAGCACCTCTTTGA 59.862 43.478 0.00 0.00 43.84 2.69
512 513 3.753797 GGGACTAAAAGCACCTCTTTGAG 59.246 47.826 1.27 1.27 45.17 3.02
513 514 4.505039 GGGACTAAAAGCACCTCTTTGAGA 60.505 45.833 8.36 0.00 43.26 3.27
514 515 4.693095 GGACTAAAAGCACCTCTTTGAGAG 59.307 45.833 8.36 0.00 43.26 3.20
515 516 5.297569 ACTAAAAGCACCTCTTTGAGAGT 57.702 39.130 8.36 2.74 43.26 3.24
517 518 4.429854 AAAAGCACCTCTTTGAGAGTCT 57.570 40.909 0.00 0.00 43.84 3.24
521 522 4.786425 AGCACCTCTTTGAGAGTCTTTTT 58.214 39.130 0.00 0.00 40.72 1.94
550 551 8.850007 AAAGTCCTATGAACTAGAAAAAGTCC 57.150 34.615 0.00 0.00 0.00 3.85
552 553 8.896722 AGTCCTATGAACTAGAAAAAGTCCTA 57.103 34.615 0.00 0.00 0.00 2.94
553 554 8.973182 AGTCCTATGAACTAGAAAAAGTCCTAG 58.027 37.037 0.00 0.00 38.57 3.02
555 556 8.120538 TCCTATGAACTAGAAAAAGTCCTAGGA 58.879 37.037 7.62 7.62 37.32 2.94
556 557 8.198778 CCTATGAACTAGAAAAAGTCCTAGGAC 58.801 40.741 31.29 31.29 44.86 3.85
570 571 5.861727 GTCCTAGGACTAAAGAACCAAACA 58.138 41.667 31.12 0.00 41.57 2.83
571 572 5.699915 GTCCTAGGACTAAAGAACCAAACAC 59.300 44.000 31.12 2.21 41.57 3.32
572 573 5.001874 CCTAGGACTAAAGAACCAAACACC 58.998 45.833 1.05 0.00 0.00 4.16
574 575 4.204799 AGGACTAAAGAACCAAACACCAC 58.795 43.478 0.00 0.00 0.00 4.16
575 576 3.317149 GGACTAAAGAACCAAACACCACC 59.683 47.826 0.00 0.00 0.00 4.61
576 577 4.204799 GACTAAAGAACCAAACACCACCT 58.795 43.478 0.00 0.00 0.00 4.00
578 579 5.757988 ACTAAAGAACCAAACACCACCTAA 58.242 37.500 0.00 0.00 0.00 2.69
579 580 5.826208 ACTAAAGAACCAAACACCACCTAAG 59.174 40.000 0.00 0.00 0.00 2.18
581 582 5.376756 AAGAACCAAACACCACCTAAGTA 57.623 39.130 0.00 0.00 0.00 2.24
583 584 5.313712 AGAACCAAACACCACCTAAGTATG 58.686 41.667 0.00 0.00 0.00 2.39
584 585 4.717279 ACCAAACACCACCTAAGTATGT 57.283 40.909 0.00 0.00 0.00 2.29
586 587 6.382919 ACCAAACACCACCTAAGTATGTAT 57.617 37.500 0.00 0.00 0.00 2.29
588 589 6.657541 ACCAAACACCACCTAAGTATGTATTG 59.342 38.462 0.00 0.00 0.00 1.90
590 591 7.556275 CCAAACACCACCTAAGTATGTATTGAT 59.444 37.037 0.00 0.00 0.00 2.57
591 592 8.397906 CAAACACCACCTAAGTATGTATTGATG 58.602 37.037 0.00 0.00 0.00 3.07
592 593 7.195374 ACACCACCTAAGTATGTATTGATGT 57.805 36.000 0.00 0.00 0.00 3.06
593 594 7.630082 ACACCACCTAAGTATGTATTGATGTT 58.370 34.615 0.00 0.00 0.00 2.71
594 595 8.764558 ACACCACCTAAGTATGTATTGATGTTA 58.235 33.333 0.00 0.00 0.00 2.41
686 687 8.821686 ATGTTACTCAATCATGGGTATTTTCA 57.178 30.769 0.00 0.00 42.05 2.69
687 688 8.821686 TGTTACTCAATCATGGGTATTTTCAT 57.178 30.769 0.00 0.00 42.05 2.57
688 689 8.902806 TGTTACTCAATCATGGGTATTTTCATC 58.097 33.333 0.00 0.00 42.05 2.92
689 690 6.966534 ACTCAATCATGGGTATTTTCATCC 57.033 37.500 0.00 0.00 38.93 3.51
690 691 5.532406 ACTCAATCATGGGTATTTTCATCCG 59.468 40.000 0.00 0.00 38.93 4.18
691 692 4.278170 TCAATCATGGGTATTTTCATCCGC 59.722 41.667 0.00 0.00 0.00 5.54
692 693 2.217750 TCATGGGTATTTTCATCCGCG 58.782 47.619 0.00 0.00 0.00 6.46
693 694 1.266718 CATGGGTATTTTCATCCGCGG 59.733 52.381 22.12 22.12 0.00 6.46
694 695 1.098712 TGGGTATTTTCATCCGCGGC 61.099 55.000 23.51 2.01 0.00 6.53
695 696 1.098712 GGGTATTTTCATCCGCGGCA 61.099 55.000 23.51 10.36 0.00 5.69
696 697 0.736053 GGTATTTTCATCCGCGGCAA 59.264 50.000 23.51 10.31 0.00 4.52
697 698 1.336755 GGTATTTTCATCCGCGGCAAT 59.663 47.619 23.51 14.82 0.00 3.56
698 699 2.604614 GGTATTTTCATCCGCGGCAATC 60.605 50.000 23.51 3.38 0.00 2.67
699 700 0.385390 ATTTTCATCCGCGGCAATCC 59.615 50.000 23.51 0.00 0.00 3.01
700 701 0.962855 TTTTCATCCGCGGCAATCCA 60.963 50.000 23.51 1.11 0.00 3.41
701 702 0.751277 TTTCATCCGCGGCAATCCAT 60.751 50.000 23.51 4.20 0.00 3.41
702 703 0.751277 TTCATCCGCGGCAATCCATT 60.751 50.000 23.51 0.00 0.00 3.16
703 704 0.751277 TCATCCGCGGCAATCCATTT 60.751 50.000 23.51 0.00 0.00 2.32
704 705 0.950836 CATCCGCGGCAATCCATTTA 59.049 50.000 23.51 0.00 0.00 1.40
705 706 1.541147 CATCCGCGGCAATCCATTTAT 59.459 47.619 23.51 0.61 0.00 1.40
706 707 1.686355 TCCGCGGCAATCCATTTATT 58.314 45.000 23.51 0.00 0.00 1.40
707 708 2.028130 TCCGCGGCAATCCATTTATTT 58.972 42.857 23.51 0.00 0.00 1.40
708 709 2.428890 TCCGCGGCAATCCATTTATTTT 59.571 40.909 23.51 0.00 0.00 1.82
709 710 2.539274 CCGCGGCAATCCATTTATTTTG 59.461 45.455 14.67 0.00 0.00 2.44
710 711 3.186119 CGCGGCAATCCATTTATTTTGT 58.814 40.909 0.00 0.00 0.00 2.83
711 712 4.355437 CGCGGCAATCCATTTATTTTGTA 58.645 39.130 0.00 0.00 0.00 2.41
712 713 4.981674 CGCGGCAATCCATTTATTTTGTAT 59.018 37.500 0.00 0.00 0.00 2.29
713 714 5.116983 CGCGGCAATCCATTTATTTTGTATC 59.883 40.000 0.00 0.00 0.00 2.24
714 715 6.215845 GCGGCAATCCATTTATTTTGTATCT 58.784 36.000 0.00 0.00 0.00 1.98
715 716 6.363357 GCGGCAATCCATTTATTTTGTATCTC 59.637 38.462 0.00 0.00 0.00 2.75
716 717 7.651808 CGGCAATCCATTTATTTTGTATCTCT 58.348 34.615 0.00 0.00 0.00 3.10
717 718 8.783093 CGGCAATCCATTTATTTTGTATCTCTA 58.217 33.333 0.00 0.00 0.00 2.43
728 729 9.914131 TTATTTTGTATCTCTATCAGATGACGG 57.086 33.333 0.00 0.00 42.37 4.79
729 730 7.582667 TTTTGTATCTCTATCAGATGACGGA 57.417 36.000 0.00 0.00 42.37 4.69
730 731 7.767250 TTTGTATCTCTATCAGATGACGGAT 57.233 36.000 0.00 0.00 42.37 4.18
731 732 8.863872 TTTGTATCTCTATCAGATGACGGATA 57.136 34.615 0.00 0.00 42.37 2.59
732 733 9.467796 TTTGTATCTCTATCAGATGACGGATAT 57.532 33.333 0.00 0.00 42.37 1.63
733 734 8.443953 TGTATCTCTATCAGATGACGGATATG 57.556 38.462 0.00 0.00 42.37 1.78
734 735 8.267894 TGTATCTCTATCAGATGACGGATATGA 58.732 37.037 0.00 0.00 42.37 2.15
735 736 9.114952 GTATCTCTATCAGATGACGGATATGAA 57.885 37.037 0.00 0.00 42.37 2.57
736 737 8.586879 ATCTCTATCAGATGACGGATATGAAA 57.413 34.615 0.00 0.00 40.71 2.69
737 738 8.409358 TCTCTATCAGATGACGGATATGAAAA 57.591 34.615 0.00 0.00 35.91 2.29
738 739 8.860088 TCTCTATCAGATGACGGATATGAAAAA 58.140 33.333 0.00 0.00 35.91 1.94
762 763 7.966246 AAAATTATGTTCATTTGCAAGCTCA 57.034 28.000 0.00 0.00 0.00 4.26
763 764 7.966246 AAATTATGTTCATTTGCAAGCTCAA 57.034 28.000 0.00 0.00 0.00 3.02
764 765 7.966246 AATTATGTTCATTTGCAAGCTCAAA 57.034 28.000 0.00 3.32 39.87 2.69
765 766 8.556213 AATTATGTTCATTTGCAAGCTCAAAT 57.444 26.923 7.40 7.40 44.77 2.32
771 772 3.322211 TTTGCAAGCTCAAATGGGATG 57.678 42.857 0.00 0.00 31.64 3.51
772 773 1.187974 TGCAAGCTCAAATGGGATGG 58.812 50.000 0.00 0.00 0.00 3.51
773 774 1.272592 TGCAAGCTCAAATGGGATGGA 60.273 47.619 0.00 0.00 0.00 3.41
774 775 2.037144 GCAAGCTCAAATGGGATGGAT 58.963 47.619 0.00 0.00 0.00 3.41
775 776 3.225104 GCAAGCTCAAATGGGATGGATA 58.775 45.455 0.00 0.00 0.00 2.59
776 777 3.638160 GCAAGCTCAAATGGGATGGATAA 59.362 43.478 0.00 0.00 0.00 1.75
777 778 4.261909 GCAAGCTCAAATGGGATGGATAAG 60.262 45.833 0.00 0.00 0.00 1.73
778 779 4.109877 AGCTCAAATGGGATGGATAAGG 57.890 45.455 0.00 0.00 0.00 2.69
779 780 3.160269 GCTCAAATGGGATGGATAAGGG 58.840 50.000 0.00 0.00 0.00 3.95
780 781 3.437052 GCTCAAATGGGATGGATAAGGGT 60.437 47.826 0.00 0.00 0.00 4.34
781 782 4.202567 GCTCAAATGGGATGGATAAGGGTA 60.203 45.833 0.00 0.00 0.00 3.69
782 783 5.517299 GCTCAAATGGGATGGATAAGGGTAT 60.517 44.000 0.00 0.00 0.00 2.73
783 784 6.297010 GCTCAAATGGGATGGATAAGGGTATA 60.297 42.308 0.00 0.00 0.00 1.47
784 785 7.270832 TCAAATGGGATGGATAAGGGTATAG 57.729 40.000 0.00 0.00 0.00 1.31
787 788 8.339247 CAAATGGGATGGATAAGGGTATAGAAT 58.661 37.037 0.00 0.00 0.00 2.40
788 789 9.588432 AAATGGGATGGATAAGGGTATAGAATA 57.412 33.333 0.00 0.00 0.00 1.75
789 790 9.588432 AATGGGATGGATAAGGGTATAGAATAA 57.412 33.333 0.00 0.00 0.00 1.40
790 791 8.388656 TGGGATGGATAAGGGTATAGAATAAC 57.611 38.462 0.00 0.00 0.00 1.89
791 792 8.191110 TGGGATGGATAAGGGTATAGAATAACT 58.809 37.037 0.00 0.00 0.00 2.24
792 793 9.059023 GGGATGGATAAGGGTATAGAATAACTT 57.941 37.037 0.00 0.00 0.00 2.66
796 797 8.877195 TGGATAAGGGTATAGAATAACTTCACC 58.123 37.037 0.00 0.00 33.56 4.02
797 798 8.319881 GGATAAGGGTATAGAATAACTTCACCC 58.680 40.741 0.00 0.00 44.73 4.61
799 800 7.707467 AAGGGTATAGAATAACTTCACCCAT 57.293 36.000 9.42 0.00 45.79 4.00
800 801 8.808240 AAGGGTATAGAATAACTTCACCCATA 57.192 34.615 9.42 0.00 45.79 2.74
801 802 8.203681 AGGGTATAGAATAACTTCACCCATAC 57.796 38.462 9.42 4.29 45.79 2.39
802 803 7.237055 AGGGTATAGAATAACTTCACCCATACC 59.763 40.741 9.42 10.22 45.79 2.73
803 804 7.392418 GGTATAGAATAACTTCACCCATACCC 58.608 42.308 0.00 0.00 33.52 3.69
808 809 3.895704 AACTTCACCCATACCCAAACT 57.104 42.857 0.00 0.00 0.00 2.66
809 810 3.434940 ACTTCACCCATACCCAAACTC 57.565 47.619 0.00 0.00 0.00 3.01
810 811 2.986728 ACTTCACCCATACCCAAACTCT 59.013 45.455 0.00 0.00 0.00 3.24
811 812 4.172807 ACTTCACCCATACCCAAACTCTA 58.827 43.478 0.00 0.00 0.00 2.43
812 813 4.019591 ACTTCACCCATACCCAAACTCTAC 60.020 45.833 0.00 0.00 0.00 2.59
813 814 2.498481 TCACCCATACCCAAACTCTACG 59.502 50.000 0.00 0.00 0.00 3.51
814 815 1.835531 ACCCATACCCAAACTCTACGG 59.164 52.381 0.00 0.00 0.00 4.02
815 816 1.140252 CCCATACCCAAACTCTACGGG 59.860 57.143 0.00 0.00 46.22 5.28
818 819 4.296265 CCCAAACTCTACGGGTGC 57.704 61.111 0.00 0.00 35.03 5.01
819 820 1.376812 CCCAAACTCTACGGGTGCC 60.377 63.158 0.00 0.00 35.03 5.01
820 821 1.373435 CCAAACTCTACGGGTGCCA 59.627 57.895 0.00 0.00 0.00 4.92
822 823 1.369625 CAAACTCTACGGGTGCCATC 58.630 55.000 0.00 0.00 0.00 3.51
824 825 0.617820 AACTCTACGGGTGCCATCCT 60.618 55.000 0.00 0.00 0.00 3.24
825 826 0.260816 ACTCTACGGGTGCCATCCTA 59.739 55.000 0.00 0.00 0.00 2.94
837 838 0.254747 CCATCCTAGACCGGCCAAAA 59.745 55.000 0.00 0.00 0.00 2.44
851 852 3.708734 AAAAACTCGGCCGCGTCG 61.709 61.111 22.83 11.43 0.00 5.12
892 893 5.296283 TCCCGAAACAAAAATACAAACTCGA 59.704 36.000 0.00 0.00 0.00 4.04
893 894 5.623673 CCCGAAACAAAAATACAAACTCGAG 59.376 40.000 11.84 11.84 0.00 4.04
928 929 1.862806 GTGGCGACAAAGCTCAGTC 59.137 57.895 0.00 8.11 46.06 3.51
937 938 0.387878 AAAGCTCAGTCGACTCGCTG 60.388 55.000 29.29 15.78 32.28 5.18
940 941 0.664767 GCTCAGTCGACTCGCTGTTT 60.665 55.000 16.96 0.00 34.53 2.83
941 942 1.772182 CTCAGTCGACTCGCTGTTTT 58.228 50.000 16.96 0.00 34.53 2.43
943 944 3.502920 CTCAGTCGACTCGCTGTTTTAT 58.497 45.455 16.96 0.00 34.53 1.40
1024 1032 2.099062 GCAAACCGCAGAGCATCG 59.901 61.111 0.00 0.00 42.67 3.84
1067 1079 3.105937 GGAAAGAAAAACATATCGCGCC 58.894 45.455 0.00 0.00 0.00 6.53
1283 1301 3.036429 GCGAGGGCTTCCAGGTCAT 62.036 63.158 0.00 0.00 35.83 3.06
1334 1364 1.314534 TTCCTCGCCGACACCGATAA 61.315 55.000 0.00 0.00 38.22 1.75
1344 1374 1.062002 GACACCGATAACAACCGCATG 59.938 52.381 0.00 0.00 0.00 4.06
1521 1566 2.132686 ACCCAGTACAGGTTCCAAACT 58.867 47.619 3.34 0.00 32.05 2.66
1893 2015 0.896940 AGAGTTTCCCCGTCGTGCTA 60.897 55.000 0.00 0.00 0.00 3.49
2044 2166 1.568612 CGTGTGCAAATGCTCGGAGT 61.569 55.000 6.90 0.00 42.66 3.85
2088 2216 0.535102 CCAATGGATGCCGAGGTACC 60.535 60.000 2.73 2.73 0.00 3.34
2091 2219 0.687354 ATGGATGCCGAGGTACCATC 59.313 55.000 15.94 7.65 36.78 3.51
2093 2221 0.318762 GGATGCCGAGGTACCATCTC 59.681 60.000 15.94 1.71 36.49 2.75
2237 2373 0.389817 TCGATGAGTGCAAGTTCCCG 60.390 55.000 0.00 0.00 0.00 5.14
2333 2469 2.042686 TGAGAGGCGATGGGAAATTG 57.957 50.000 0.00 0.00 0.00 2.32
2345 2481 1.613437 GGGAAATTGGGACAGTGTGTG 59.387 52.381 0.00 0.00 42.39 3.82
2358 2494 3.221771 CAGTGTGTGGAGAAATTTCCCA 58.778 45.455 18.85 18.85 36.35 4.37
2360 2496 4.281688 CAGTGTGTGGAGAAATTTCCCATT 59.718 41.667 23.05 4.84 36.35 3.16
2551 3121 3.697166 AGTGAAAATGGGGTACATGGAC 58.303 45.455 0.00 0.00 40.44 4.02
2552 3122 3.075283 AGTGAAAATGGGGTACATGGACA 59.925 43.478 10.99 0.00 40.44 4.02
2553 3123 3.443681 GTGAAAATGGGGTACATGGACAG 59.556 47.826 10.99 0.00 40.44 3.51
2554 3124 2.143876 AAATGGGGTACATGGACAGC 57.856 50.000 10.99 0.00 40.44 4.40
2555 3125 1.298953 AATGGGGTACATGGACAGCT 58.701 50.000 10.99 0.00 40.44 4.24
2556 3126 1.298953 ATGGGGTACATGGACAGCTT 58.701 50.000 10.99 0.00 38.70 3.74
2557 3127 1.072266 TGGGGTACATGGACAGCTTT 58.928 50.000 10.99 0.00 0.00 3.51
2558 3128 1.427368 TGGGGTACATGGACAGCTTTT 59.573 47.619 10.99 0.00 0.00 2.27
2559 3129 2.158385 TGGGGTACATGGACAGCTTTTT 60.158 45.455 10.99 0.00 0.00 1.94
2589 3159 3.817709 TTTTCTTTTTGAGTGGCTGGG 57.182 42.857 0.00 0.00 0.00 4.45
2590 3160 2.452600 TTCTTTTTGAGTGGCTGGGT 57.547 45.000 0.00 0.00 0.00 4.51
2591 3161 3.586470 TTCTTTTTGAGTGGCTGGGTA 57.414 42.857 0.00 0.00 0.00 3.69
2592 3162 2.858745 TCTTTTTGAGTGGCTGGGTAC 58.141 47.619 0.00 0.00 0.00 3.34
2593 3163 2.173782 TCTTTTTGAGTGGCTGGGTACA 59.826 45.455 0.00 0.00 0.00 2.90
2594 3164 2.969821 TTTTGAGTGGCTGGGTACAT 57.030 45.000 0.00 0.00 0.00 2.29
2595 3165 2.198827 TTTGAGTGGCTGGGTACATG 57.801 50.000 0.00 0.00 0.00 3.21
2596 3166 0.327924 TTGAGTGGCTGGGTACATGG 59.672 55.000 0.00 0.00 0.00 3.66
2597 3167 0.546507 TGAGTGGCTGGGTACATGGA 60.547 55.000 0.00 0.00 0.00 3.41
2612 3182 2.256174 CATGGACAACTACGTACACGG 58.744 52.381 6.72 0.00 44.95 4.94
2656 3254 1.376466 GCTCAAGACAGGCCCAGAA 59.624 57.895 0.00 0.00 0.00 3.02
2739 5988 7.448777 GGTCCTCTTCTTTTCCTAGTTTTTGAT 59.551 37.037 0.00 0.00 0.00 2.57
2741 5990 9.421399 TCCTCTTCTTTTCCTAGTTTTTGATTT 57.579 29.630 0.00 0.00 0.00 2.17
2848 6097 3.951775 TTGGCATGGTTTCCAACATAC 57.048 42.857 0.00 0.00 37.43 2.39
2870 6119 6.824305 ACCATATGCCTTTGACTAATATGC 57.176 37.500 0.00 0.00 32.34 3.14
2933 6210 9.541143 AACAAAACCAAAATATGAACTAACCAG 57.459 29.630 0.00 0.00 0.00 4.00
3123 6503 9.467258 TTTGCTCTAAAGAACAGATGAAATTTG 57.533 29.630 0.00 0.00 34.06 2.32
3136 6516 7.094032 ACAGATGAAATTTGAAGAGGGTCATTC 60.094 37.037 0.00 0.00 31.92 2.67
3234 6627 2.416431 CCTTTCAGCTTGTTGGCATAGC 60.416 50.000 8.26 8.26 35.16 2.97
3254 6647 2.290323 GCAGGGTAGCTTCTCCTTTCAA 60.290 50.000 0.00 0.00 0.00 2.69
4391 7784 2.305927 AGAAATCCATGTCGGGTCTTGT 59.694 45.455 0.00 0.00 34.36 3.16
4666 8060 9.045223 GTTGTTGGCATTTCTTCTCTTATTTTT 57.955 29.630 0.00 0.00 0.00 1.94
4788 8182 4.853924 ATTTCGGCAAACTCATCAAAGT 57.146 36.364 0.00 0.00 0.00 2.66
4914 8308 3.319137 ACATTCACTATGAGCACACGT 57.681 42.857 0.00 0.00 37.69 4.49
4916 8310 3.253230 CATTCACTATGAGCACACGTCA 58.747 45.455 0.00 0.00 36.26 4.35
4938 8332 3.325135 AGGCCTCTAAACGATTAGGATGG 59.675 47.826 11.97 12.11 39.24 3.51
5126 8520 3.702048 GAGCACACACCCGGCCTA 61.702 66.667 0.00 0.00 0.00 3.93
5307 8709 2.756760 GCACCAACCATCTCATGACAAT 59.243 45.455 0.00 0.00 0.00 2.71
5476 8896 6.619744 TCAACAAGGTAACGACGTATGAATA 58.380 36.000 0.00 0.00 46.39 1.75
5548 8970 2.222886 GAGCTCGATACTAGGTGCTCA 58.777 52.381 12.54 0.00 44.19 4.26
5636 9062 1.447838 CTACCAACGATGCCGCTGT 60.448 57.895 0.00 0.00 39.95 4.40
5814 9245 9.425248 AAATAGGCCAATCAAAATCTAGATCAA 57.575 29.630 5.01 0.00 0.00 2.57
5950 9383 0.460109 GAACAAATCCATTGCCCGGC 60.460 55.000 1.04 1.04 43.13 6.13
6050 9484 1.816074 GATCCACCTTGCGGTAAACA 58.184 50.000 0.00 0.00 43.24 2.83
6068 9502 5.543507 AAACATACAAGGATGCAACCAAA 57.456 34.783 16.21 0.00 0.00 3.28
6129 9563 2.736670 AGAAATCCAATTCCCCGAGG 57.263 50.000 0.00 0.00 0.00 4.63
6193 9627 2.817258 CGAAGAGGACAAGTCAGAGTCT 59.183 50.000 2.29 0.00 35.18 3.24
6330 9766 8.865590 TGCAAACTTTTTAGTAGGATGTTTTC 57.134 30.769 0.00 0.00 0.00 2.29
6367 9805 9.730705 ATCATTGGTGGTATTTCTATCATAGTG 57.269 33.333 0.00 0.00 0.00 2.74
6421 9859 1.981495 AGAAGGAAGACCAGGGAGTTG 59.019 52.381 0.00 0.00 38.94 3.16
6539 9977 1.252904 CGGAAGAGGTGGGTTCGGTA 61.253 60.000 0.00 0.00 0.00 4.02
6791 10229 8.718656 ACAAGAAGCCTCTAAACTTGGATATAT 58.281 33.333 0.00 0.00 41.15 0.86
7027 10465 0.829333 ATCTACAGTCAGGCCTGCTG 59.171 55.000 35.67 35.67 39.17 4.41
7042 10480 2.805099 CCTGCTGACTGAAAAGAGTGAC 59.195 50.000 0.00 0.00 0.00 3.67
7165 10603 0.318784 ACGAGAACAGAGCAACCGAC 60.319 55.000 0.00 0.00 0.00 4.79
7220 10658 5.319453 ACATGGAGCTTCTTCAAAATCTGA 58.681 37.500 0.00 0.00 0.00 3.27
7243 10681 0.459237 GGATGGCAGTCGAGTGTCTG 60.459 60.000 24.29 11.08 34.83 3.51
7320 10758 8.613482 TCTAATACTGAACAAGTCTCGTAGATG 58.387 37.037 0.00 0.00 40.56 2.90
7410 10853 9.113838 GAGCAAATATTACTGATACATATGGGG 57.886 37.037 7.80 0.00 0.00 4.96
7456 10899 5.917541 AATGTGTACTTGGTTGTAACTCG 57.082 39.130 0.00 0.00 0.00 4.18
7567 11019 0.971959 TTCCCCATGTGCTTGGATGC 60.972 55.000 5.77 0.00 39.25 3.91
7645 15999 4.539870 CAGCTACAAATCAACAGTTGTGG 58.460 43.478 13.14 0.00 40.93 4.17
7652 16006 7.346751 ACAAATCAACAGTTGTGGAGTTTAT 57.653 32.000 13.14 0.00 39.34 1.40
7653 16007 8.458573 ACAAATCAACAGTTGTGGAGTTTATA 57.541 30.769 13.14 0.00 39.34 0.98
7655 16009 9.180678 CAAATCAACAGTTGTGGAGTTTATAAC 57.819 33.333 13.14 0.00 34.42 1.89
7661 17810 9.581099 AACAGTTGTGGAGTTTATAACAAAAAG 57.419 29.630 0.00 0.00 34.54 2.27
7663 17812 9.796120 CAGTTGTGGAGTTTATAACAAAAAGAA 57.204 29.630 0.00 0.00 34.54 2.52
7732 17881 2.551287 CCGGAATGTTGGACCAAGTACA 60.551 50.000 7.31 3.21 0.00 2.90
7755 17904 2.592194 CTCATGCATGTTTGTCAGCAC 58.408 47.619 25.43 0.00 40.14 4.40
7769 17926 1.141881 AGCACGGAAATCGCTCGAT 59.858 52.632 0.00 0.00 43.89 3.59
7800 17962 2.281484 GGAAGGTCGGCACAGCAA 60.281 61.111 0.00 0.00 0.00 3.91
7804 17966 4.120331 GGTCGGCACAGCAATGGC 62.120 66.667 3.93 3.93 41.61 4.40
7835 17998 5.864628 GAACAAAAGGTGGTCAGATACTC 57.135 43.478 0.00 0.00 44.12 2.59
7836 17999 4.974645 ACAAAAGGTGGTCAGATACTCA 57.025 40.909 0.00 0.00 0.00 3.41
7837 18000 4.899502 ACAAAAGGTGGTCAGATACTCAG 58.100 43.478 0.00 0.00 0.00 3.35
7838 18001 4.593206 ACAAAAGGTGGTCAGATACTCAGA 59.407 41.667 0.00 0.00 0.00 3.27
7839 18002 5.249393 ACAAAAGGTGGTCAGATACTCAGAT 59.751 40.000 0.00 0.00 0.00 2.90
7858 18021 3.641436 AGATTTTGGCCGGAAAAGTCTTT 59.359 39.130 17.12 0.00 0.00 2.52
7859 18022 3.897141 TTTTGGCCGGAAAAGTCTTTT 57.103 38.095 5.05 10.38 35.12 2.27
7871 18034 6.368213 GGAAAAGTCTTTTGTACGGTATGTG 58.632 40.000 15.28 0.00 31.94 3.21
7905 18074 1.522580 GGGCTTCGGACTCAGCATC 60.523 63.158 2.89 0.00 37.81 3.91
7908 18077 0.174389 GCTTCGGACTCAGCATCTGA 59.826 55.000 0.00 0.00 38.25 3.27
7920 18089 2.854777 CAGCATCTGAACGTAGTAGTGC 59.145 50.000 6.95 6.95 45.00 4.40
7952 18121 2.441164 AGAGCCGGATGAGCGTCT 60.441 61.111 5.05 0.00 34.64 4.18
8000 18169 3.368495 GCACCAAAACAAACTACTTCGG 58.632 45.455 0.00 0.00 0.00 4.30
8013 18182 1.378762 CTTCGGCCCCCAGAAAGAA 59.621 57.895 0.00 0.00 0.00 2.52
8017 18186 1.304464 GGCCCCCAGAAAGAACCTG 60.304 63.158 0.00 0.00 0.00 4.00
8062 18231 4.724697 CTTGACCGCGCACGCTTG 62.725 66.667 13.70 6.67 39.32 4.01
8109 18283 1.262683 CCTAACTCCGTCGGTATCGTC 59.737 57.143 11.88 0.00 37.69 4.20
8117 18291 2.992313 CGGTATCGTCGCCGTTTG 59.008 61.111 2.07 0.00 42.73 2.93
8118 18292 2.699212 GGTATCGTCGCCGTTTGC 59.301 61.111 0.00 0.00 35.01 3.68
8119 18293 1.808390 GGTATCGTCGCCGTTTGCT 60.808 57.895 0.00 0.00 38.05 3.91
8120 18294 1.629504 GTATCGTCGCCGTTTGCTC 59.370 57.895 0.00 0.00 38.05 4.26
8121 18295 1.870458 TATCGTCGCCGTTTGCTCG 60.870 57.895 0.00 0.00 38.05 5.03
8122 18296 2.255994 TATCGTCGCCGTTTGCTCGA 62.256 55.000 0.00 0.00 43.75 4.04
8123 18297 3.399770 CGTCGCCGTTTGCTCGAA 61.400 61.111 0.00 0.00 37.22 3.71
8124 18298 2.932905 GTCGCCGTTTGCTCGAAA 59.067 55.556 0.00 0.00 38.05 3.46
8125 18299 1.277440 GTCGCCGTTTGCTCGAAAA 59.723 52.632 0.00 0.00 38.05 2.29
8126 18300 0.990295 GTCGCCGTTTGCTCGAAAAC 60.990 55.000 3.14 3.14 38.05 2.43
8127 18301 1.724581 CGCCGTTTGCTCGAAAACC 60.725 57.895 7.05 0.00 36.83 3.27
8128 18302 1.371267 GCCGTTTGCTCGAAAACCC 60.371 57.895 7.05 0.00 36.83 4.11
8129 18303 1.792118 GCCGTTTGCTCGAAAACCCT 61.792 55.000 7.05 0.00 36.83 4.34
8130 18304 1.515081 CCGTTTGCTCGAAAACCCTA 58.485 50.000 7.05 0.00 36.83 3.53
8131 18305 1.463444 CCGTTTGCTCGAAAACCCTAG 59.537 52.381 7.05 0.00 36.83 3.02
8132 18306 2.409975 CGTTTGCTCGAAAACCCTAGA 58.590 47.619 7.05 0.00 36.83 2.43
8133 18307 2.412089 CGTTTGCTCGAAAACCCTAGAG 59.588 50.000 7.05 0.00 36.83 2.43
8134 18308 3.400255 GTTTGCTCGAAAACCCTAGAGT 58.600 45.455 1.93 0.00 34.58 3.24
8135 18309 3.764237 TTGCTCGAAAACCCTAGAGTT 57.236 42.857 0.00 0.00 33.57 3.01
8136 18310 3.040147 TGCTCGAAAACCCTAGAGTTG 57.960 47.619 0.00 0.00 33.57 3.16
8137 18311 1.732809 GCTCGAAAACCCTAGAGTTGC 59.267 52.381 0.00 0.00 33.57 4.17
8138 18312 1.993370 CTCGAAAACCCTAGAGTTGCG 59.007 52.381 6.38 6.38 32.70 4.85
8139 18313 1.342174 TCGAAAACCCTAGAGTTGCGT 59.658 47.619 10.80 0.00 33.02 5.24
8140 18314 2.140717 CGAAAACCCTAGAGTTGCGTT 58.859 47.619 0.00 0.00 0.00 4.84
8141 18315 2.157085 CGAAAACCCTAGAGTTGCGTTC 59.843 50.000 0.00 0.00 0.00 3.95
8142 18316 2.180432 AAACCCTAGAGTTGCGTTCC 57.820 50.000 0.00 0.00 0.00 3.62
8161 18335 1.211212 CCAGCCAGATGAACCTGATGA 59.789 52.381 0.00 0.00 36.29 2.92
8193 18367 1.673168 AGGAATTGAGCGCCATTCTC 58.327 50.000 18.76 11.85 0.00 2.87
8195 18369 2.019984 GGAATTGAGCGCCATTCTCTT 58.980 47.619 18.76 4.27 0.00 2.85
8198 18372 0.615331 TTGAGCGCCATTCTCTTCCT 59.385 50.000 2.29 0.00 0.00 3.36
8199 18373 0.107993 TGAGCGCCATTCTCTTCCTG 60.108 55.000 2.29 0.00 0.00 3.86
8201 18375 1.078143 GCGCCATTCTCTTCCTGGT 60.078 57.895 0.00 0.00 32.42 4.00
8203 18377 1.373570 CGCCATTCTCTTCCTGGTTC 58.626 55.000 0.00 0.00 32.42 3.62
8204 18378 1.373570 GCCATTCTCTTCCTGGTTCG 58.626 55.000 0.00 0.00 32.42 3.95
8205 18379 1.373570 CCATTCTCTTCCTGGTTCGC 58.626 55.000 0.00 0.00 0.00 4.70
8206 18380 1.339055 CCATTCTCTTCCTGGTTCGCA 60.339 52.381 0.00 0.00 0.00 5.10
8207 18381 1.734465 CATTCTCTTCCTGGTTCGCAC 59.266 52.381 0.00 0.00 0.00 5.34
8208 18382 0.034896 TTCTCTTCCTGGTTCGCACC 59.965 55.000 0.00 0.00 44.56 5.01
8238 18412 1.143073 AGGGCATTTCTAACCGATCCC 59.857 52.381 0.00 0.00 0.00 3.85
8239 18413 1.143073 GGGCATTTCTAACCGATCCCT 59.857 52.381 0.00 0.00 0.00 4.20
8251 18425 2.366590 ACCGATCCCTTATAACCGGTTC 59.633 50.000 26.16 4.92 46.64 3.62
8254 18428 3.243501 CGATCCCTTATAACCGGTTCGAA 60.244 47.826 26.16 17.58 39.94 3.71
8255 18429 3.806625 TCCCTTATAACCGGTTCGAAG 57.193 47.619 26.16 25.09 0.00 3.79
8259 18433 4.110482 CCTTATAACCGGTTCGAAGAGTG 58.890 47.826 29.56 16.61 38.43 3.51
8268 18442 3.423123 CGGTTCGAAGAGTGAAAATTCGG 60.423 47.826 0.00 0.00 44.42 4.30
8270 18444 4.377124 GGTTCGAAGAGTGAAAATTCGGTC 60.377 45.833 0.00 1.48 44.42 4.79
8274 18448 5.632347 TCGAAGAGTGAAAATTCGGTCTTAC 59.368 40.000 6.71 4.56 44.42 2.34
8277 18451 7.307219 CGAAGAGTGAAAATTCGGTCTTACTTT 60.307 37.037 8.84 0.00 41.50 2.66
8306 18480 1.271597 GCATCTAGCCGATCCCCAATT 60.272 52.381 0.00 0.00 37.23 2.32
8311 18485 2.244651 GCCGATCCCCAATTCGTCG 61.245 63.158 0.00 0.00 33.60 5.12
8312 18486 1.143183 CCGATCCCCAATTCGTCGT 59.857 57.895 0.00 0.00 33.60 4.34
8313 18487 0.386476 CCGATCCCCAATTCGTCGTA 59.614 55.000 0.00 0.00 33.60 3.43
8314 18488 1.202440 CCGATCCCCAATTCGTCGTAA 60.202 52.381 0.00 0.00 33.60 3.18
8316 18490 2.480845 GATCCCCAATTCGTCGTAAGG 58.519 52.381 0.00 0.00 38.47 2.69
8318 18492 0.538118 CCCCAATTCGTCGTAAGGGA 59.462 55.000 12.44 0.00 38.60 4.20
8319 18493 1.472728 CCCCAATTCGTCGTAAGGGAG 60.473 57.143 12.44 2.29 38.60 4.30
8320 18494 1.287425 CCAATTCGTCGTAAGGGAGC 58.713 55.000 0.00 0.00 38.47 4.70
8321 18495 1.404986 CCAATTCGTCGTAAGGGAGCA 60.405 52.381 0.00 0.00 38.47 4.26
8322 18496 2.343101 CAATTCGTCGTAAGGGAGCAA 58.657 47.619 0.00 0.00 38.47 3.91
8323 18497 2.739913 CAATTCGTCGTAAGGGAGCAAA 59.260 45.455 0.00 0.00 38.47 3.68
8324 18498 2.074547 TTCGTCGTAAGGGAGCAAAG 57.925 50.000 0.00 0.00 38.47 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.554692 CCGCCAGCGTTCGATGTC 61.555 66.667 11.55 0.00 37.81 3.06
2 3 3.709880 TACCCGCCAGCGTTCGATG 62.710 63.158 11.55 3.43 37.81 3.84
3 4 3.426117 CTACCCGCCAGCGTTCGAT 62.426 63.158 11.55 0.00 37.81 3.59
6 7 4.752879 TGCTACCCGCCAGCGTTC 62.753 66.667 11.55 0.00 42.13 3.95
7 8 4.760047 CTGCTACCCGCCAGCGTT 62.760 66.667 11.55 0.00 42.13 4.84
33 34 3.506455 TCGACTTCGATTTCACTCCTCTT 59.494 43.478 0.00 0.00 44.22 2.85
56 57 3.198872 CCACCCTTCGCTATCTTCTTTC 58.801 50.000 0.00 0.00 0.00 2.62
86 87 1.602311 CATCCTATGGCCAGAAGCAC 58.398 55.000 13.05 0.00 46.50 4.40
87 88 0.179009 GCATCCTATGGCCAGAAGCA 60.179 55.000 13.05 0.00 46.50 3.91
105 106 1.029947 ATGAACGTTCGATTGGGGGC 61.030 55.000 22.48 0.00 0.00 5.80
130 131 6.239217 ACCCTAATAGGTTTTTACCCGTAG 57.761 41.667 5.49 0.00 36.44 3.51
131 132 7.621683 TCTTACCCTAATAGGTTTTTACCCGTA 59.378 37.037 5.49 0.00 41.58 4.02
132 133 6.443527 TCTTACCCTAATAGGTTTTTACCCGT 59.556 38.462 5.49 0.00 41.58 5.28
133 134 6.888105 TCTTACCCTAATAGGTTTTTACCCG 58.112 40.000 5.49 0.00 41.58 5.28
134 135 6.769822 GCTCTTACCCTAATAGGTTTTTACCC 59.230 42.308 5.49 0.00 41.58 3.69
135 136 7.341030 TGCTCTTACCCTAATAGGTTTTTACC 58.659 38.462 5.49 0.00 41.58 2.85
136 137 8.837389 CATGCTCTTACCCTAATAGGTTTTTAC 58.163 37.037 5.49 0.00 41.58 2.01
138 139 6.833933 CCATGCTCTTACCCTAATAGGTTTTT 59.166 38.462 5.49 0.00 41.58 1.94
139 140 6.365520 CCATGCTCTTACCCTAATAGGTTTT 58.634 40.000 5.49 0.00 41.58 2.43
140 141 5.163088 CCCATGCTCTTACCCTAATAGGTTT 60.163 44.000 5.49 0.00 41.58 3.27
142 143 3.910627 CCCATGCTCTTACCCTAATAGGT 59.089 47.826 5.49 0.00 44.37 3.08
143 144 4.020128 GTCCCATGCTCTTACCCTAATAGG 60.020 50.000 0.00 0.00 34.30 2.57
144 145 4.593206 TGTCCCATGCTCTTACCCTAATAG 59.407 45.833 0.00 0.00 0.00 1.73
146 147 3.393687 TGTCCCATGCTCTTACCCTAAT 58.606 45.455 0.00 0.00 0.00 1.73
148 149 2.561209 TGTCCCATGCTCTTACCCTA 57.439 50.000 0.00 0.00 0.00 3.53
149 150 1.668826 TTGTCCCATGCTCTTACCCT 58.331 50.000 0.00 0.00 0.00 4.34
150 151 2.492088 GTTTTGTCCCATGCTCTTACCC 59.508 50.000 0.00 0.00 0.00 3.69
151 152 3.153919 TGTTTTGTCCCATGCTCTTACC 58.846 45.455 0.00 0.00 0.00 2.85
152 153 5.391312 AATGTTTTGTCCCATGCTCTTAC 57.609 39.130 0.00 0.00 0.00 2.34
153 154 5.417580 GGTAATGTTTTGTCCCATGCTCTTA 59.582 40.000 0.00 0.00 0.00 2.10
154 155 4.220602 GGTAATGTTTTGTCCCATGCTCTT 59.779 41.667 0.00 0.00 0.00 2.85
156 157 3.509575 TGGTAATGTTTTGTCCCATGCTC 59.490 43.478 0.00 0.00 0.00 4.26
157 158 3.505386 TGGTAATGTTTTGTCCCATGCT 58.495 40.909 0.00 0.00 0.00 3.79
158 159 3.951775 TGGTAATGTTTTGTCCCATGC 57.048 42.857 0.00 0.00 0.00 4.06
159 160 5.177326 CCATTGGTAATGTTTTGTCCCATG 58.823 41.667 0.00 0.00 37.18 3.66
163 164 4.882842 ACCCATTGGTAATGTTTTGTCC 57.117 40.909 1.20 0.00 45.45 4.02
188 189 9.098355 CCGATGAGTTTGAGATTTGTCTATTTA 57.902 33.333 0.00 0.00 0.00 1.40
189 190 7.066284 CCCGATGAGTTTGAGATTTGTCTATTT 59.934 37.037 0.00 0.00 0.00 1.40
191 192 6.051717 CCCGATGAGTTTGAGATTTGTCTAT 58.948 40.000 0.00 0.00 0.00 1.98
193 194 4.256920 CCCGATGAGTTTGAGATTTGTCT 58.743 43.478 0.00 0.00 0.00 3.41
194 195 4.003648 ACCCGATGAGTTTGAGATTTGTC 58.996 43.478 0.00 0.00 0.00 3.18
195 196 4.021102 ACCCGATGAGTTTGAGATTTGT 57.979 40.909 0.00 0.00 0.00 2.83
197 198 5.160607 TGTACCCGATGAGTTTGAGATTT 57.839 39.130 0.00 0.00 0.00 2.17
198 199 4.819105 TGTACCCGATGAGTTTGAGATT 57.181 40.909 0.00 0.00 0.00 2.40
199 200 4.020573 TGTTGTACCCGATGAGTTTGAGAT 60.021 41.667 0.00 0.00 0.00 2.75
201 202 3.659786 TGTTGTACCCGATGAGTTTGAG 58.340 45.455 0.00 0.00 0.00 3.02
202 203 3.556213 CCTGTTGTACCCGATGAGTTTGA 60.556 47.826 0.00 0.00 0.00 2.69
203 204 2.742053 CCTGTTGTACCCGATGAGTTTG 59.258 50.000 0.00 0.00 0.00 2.93
207 208 3.430374 CCTTACCTGTTGTACCCGATGAG 60.430 52.174 0.00 0.00 0.00 2.90
208 209 2.498481 CCTTACCTGTTGTACCCGATGA 59.502 50.000 0.00 0.00 0.00 2.92
209 210 2.235402 ACCTTACCTGTTGTACCCGATG 59.765 50.000 0.00 0.00 0.00 3.84
210 211 2.543635 ACCTTACCTGTTGTACCCGAT 58.456 47.619 0.00 0.00 0.00 4.18
211 212 2.014010 ACCTTACCTGTTGTACCCGA 57.986 50.000 0.00 0.00 0.00 5.14
212 213 2.845363 AACCTTACCTGTTGTACCCG 57.155 50.000 0.00 0.00 0.00 5.28
214 215 4.225717 TCCCATAACCTTACCTGTTGTACC 59.774 45.833 0.00 0.00 0.00 3.34
215 216 5.425196 TCCCATAACCTTACCTGTTGTAC 57.575 43.478 0.00 0.00 0.00 2.90
217 218 4.538490 TGATCCCATAACCTTACCTGTTGT 59.462 41.667 0.00 0.00 0.00 3.32
218 219 4.881850 GTGATCCCATAACCTTACCTGTTG 59.118 45.833 0.00 0.00 0.00 3.33
220 221 4.108570 TGTGATCCCATAACCTTACCTGT 58.891 43.478 0.00 0.00 0.00 4.00
221 222 4.771114 TGTGATCCCATAACCTTACCTG 57.229 45.455 0.00 0.00 0.00 4.00
222 223 6.465894 GCTTATGTGATCCCATAACCTTACCT 60.466 42.308 6.54 0.00 34.47 3.08
223 224 5.705905 GCTTATGTGATCCCATAACCTTACC 59.294 44.000 6.54 0.00 34.47 2.85
224 225 5.705905 GGCTTATGTGATCCCATAACCTTAC 59.294 44.000 6.54 0.00 34.47 2.34
225 226 5.371176 TGGCTTATGTGATCCCATAACCTTA 59.629 40.000 19.72 7.58 34.47 2.69
226 227 4.167892 TGGCTTATGTGATCCCATAACCTT 59.832 41.667 19.72 0.00 34.47 3.50
227 228 3.721575 TGGCTTATGTGATCCCATAACCT 59.278 43.478 19.72 0.00 34.47 3.50
228 229 4.098914 TGGCTTATGTGATCCCATAACC 57.901 45.455 6.54 12.23 34.47 2.85
229 230 5.648092 GGTATGGCTTATGTGATCCCATAAC 59.352 44.000 6.54 5.57 39.48 1.89
230 231 5.280985 GGGTATGGCTTATGTGATCCCATAA 60.281 44.000 9.82 9.82 39.48 1.90
231 232 4.227300 GGGTATGGCTTATGTGATCCCATA 59.773 45.833 0.00 0.00 37.47 2.74
232 233 3.010584 GGGTATGGCTTATGTGATCCCAT 59.989 47.826 0.00 0.00 39.47 4.00
233 234 2.375174 GGGTATGGCTTATGTGATCCCA 59.625 50.000 0.00 0.00 33.33 4.37
234 235 2.615493 CGGGTATGGCTTATGTGATCCC 60.615 54.545 0.00 0.00 0.00 3.85
235 236 2.699954 CGGGTATGGCTTATGTGATCC 58.300 52.381 0.00 0.00 0.00 3.36
236 237 2.076863 GCGGGTATGGCTTATGTGATC 58.923 52.381 0.00 0.00 0.00 2.92
237 238 1.608025 CGCGGGTATGGCTTATGTGAT 60.608 52.381 0.00 0.00 0.00 3.06
238 239 0.249699 CGCGGGTATGGCTTATGTGA 60.250 55.000 0.00 0.00 0.00 3.58
239 240 0.531974 ACGCGGGTATGGCTTATGTG 60.532 55.000 12.47 0.00 0.00 3.21
240 241 1.042229 TACGCGGGTATGGCTTATGT 58.958 50.000 12.47 0.00 0.00 2.29
241 242 1.425412 GTACGCGGGTATGGCTTATG 58.575 55.000 15.92 0.00 0.00 1.90
242 243 0.319405 GGTACGCGGGTATGGCTTAT 59.681 55.000 15.92 0.00 0.00 1.73
248 249 0.675083 TACATGGGTACGCGGGTATG 59.325 55.000 15.92 12.88 0.00 2.39
249 250 0.675633 GTACATGGGTACGCGGGTAT 59.324 55.000 15.92 1.03 40.41 2.73
250 251 2.114638 GTACATGGGTACGCGGGTA 58.885 57.895 12.47 8.44 40.41 3.69
259 260 8.783903 TGTTAGATTTTATAAGGGTACATGGGT 58.216 33.333 0.00 0.00 0.00 4.51
260 261 9.635404 TTGTTAGATTTTATAAGGGTACATGGG 57.365 33.333 0.00 0.00 0.00 4.00
308 309 9.868277 TTTAAGTTGACAAACTCATGACAAAAT 57.132 25.926 0.00 0.00 46.15 1.82
309 310 9.698309 TTTTAAGTTGACAAACTCATGACAAAA 57.302 25.926 0.00 0.00 46.15 2.44
310 311 9.868277 ATTTTAAGTTGACAAACTCATGACAAA 57.132 25.926 0.00 0.00 46.15 2.83
311 312 9.299963 CATTTTAAGTTGACAAACTCATGACAA 57.700 29.630 0.00 0.00 46.15 3.18
313 314 8.856490 ACATTTTAAGTTGACAAACTCATGAC 57.144 30.769 0.00 0.00 46.15 3.06
317 318 9.944663 GTCATACATTTTAAGTTGACAAACTCA 57.055 29.630 0.00 0.00 46.15 3.41
399 400 9.952030 CCCTTTATAAACAACAACCCATTTTAT 57.048 29.630 0.00 0.00 0.00 1.40
401 402 7.147284 ACCCCTTTATAAACAACAACCCATTTT 60.147 33.333 0.00 0.00 0.00 1.82
402 403 6.330514 ACCCCTTTATAAACAACAACCCATTT 59.669 34.615 0.00 0.00 0.00 2.32
404 405 5.247337 CACCCCTTTATAAACAACAACCCAT 59.753 40.000 0.00 0.00 0.00 4.00
405 406 4.589374 CACCCCTTTATAAACAACAACCCA 59.411 41.667 0.00 0.00 0.00 4.51
406 407 4.589798 ACACCCCTTTATAAACAACAACCC 59.410 41.667 0.00 0.00 0.00 4.11
407 408 5.794726 ACACCCCTTTATAAACAACAACC 57.205 39.130 0.00 0.00 0.00 3.77
408 409 6.480651 CCAAACACCCCTTTATAAACAACAAC 59.519 38.462 0.00 0.00 0.00 3.32
409 410 6.156429 ACCAAACACCCCTTTATAAACAACAA 59.844 34.615 0.00 0.00 0.00 2.83
410 411 5.661759 ACCAAACACCCCTTTATAAACAACA 59.338 36.000 0.00 0.00 0.00 3.33
411 412 6.164417 ACCAAACACCCCTTTATAAACAAC 57.836 37.500 0.00 0.00 0.00 3.32
413 414 5.304871 GGAACCAAACACCCCTTTATAAACA 59.695 40.000 0.00 0.00 0.00 2.83
414 415 5.786311 GGAACCAAACACCCCTTTATAAAC 58.214 41.667 0.00 0.00 0.00 2.01
433 434 3.488553 CCAACACAAAAAGTCTCGGGAAC 60.489 47.826 0.00 0.00 0.00 3.62
434 435 2.685897 CCAACACAAAAAGTCTCGGGAA 59.314 45.455 0.00 0.00 0.00 3.97
435 436 2.294074 CCAACACAAAAAGTCTCGGGA 58.706 47.619 0.00 0.00 0.00 5.14
436 437 1.336755 CCCAACACAAAAAGTCTCGGG 59.663 52.381 0.00 0.00 0.00 5.14
437 438 2.032924 GTCCCAACACAAAAAGTCTCGG 59.967 50.000 0.00 0.00 0.00 4.63
438 439 2.943033 AGTCCCAACACAAAAAGTCTCG 59.057 45.455 0.00 0.00 0.00 4.04
439 440 5.365619 TCTAGTCCCAACACAAAAAGTCTC 58.634 41.667 0.00 0.00 0.00 3.36
440 441 5.367945 TCTAGTCCCAACACAAAAAGTCT 57.632 39.130 0.00 0.00 0.00 3.24
441 442 6.445357 TTTCTAGTCCCAACACAAAAAGTC 57.555 37.500 0.00 0.00 0.00 3.01
442 443 6.844097 TTTTCTAGTCCCAACACAAAAAGT 57.156 33.333 0.00 0.00 0.00 2.66
444 445 7.234661 ACTTTTTCTAGTCCCAACACAAAAA 57.765 32.000 0.00 0.00 0.00 1.94
445 446 6.844097 ACTTTTTCTAGTCCCAACACAAAA 57.156 33.333 0.00 0.00 0.00 2.44
446 447 6.445357 GACTTTTTCTAGTCCCAACACAAA 57.555 37.500 0.00 0.00 38.88 2.83
456 457 6.879458 TGATTTGCTAGGGACTTTTTCTAGTC 59.121 38.462 0.00 0.00 43.05 2.59
457 458 6.779860 TGATTTGCTAGGGACTTTTTCTAGT 58.220 36.000 0.00 0.00 41.75 2.57
458 459 7.687941 TTGATTTGCTAGGGACTTTTTCTAG 57.312 36.000 0.00 0.00 41.75 2.43
461 462 6.512297 TGTTTGATTTGCTAGGGACTTTTTC 58.488 36.000 0.00 0.00 41.75 2.29
463 464 5.011023 CCTGTTTGATTTGCTAGGGACTTTT 59.989 40.000 0.00 0.00 41.75 2.27
464 465 4.524328 CCTGTTTGATTTGCTAGGGACTTT 59.476 41.667 0.00 0.00 41.75 2.66
465 466 4.082125 CCTGTTTGATTTGCTAGGGACTT 58.918 43.478 0.00 0.00 41.75 3.01
466 467 3.562176 CCCTGTTTGATTTGCTAGGGACT 60.562 47.826 0.00 0.00 46.19 3.85
467 468 2.755103 CCCTGTTTGATTTGCTAGGGAC 59.245 50.000 0.00 0.00 46.19 4.46
471 472 2.493278 CCCACCCTGTTTGATTTGCTAG 59.507 50.000 0.00 0.00 0.00 3.42
473 474 1.133199 TCCCACCCTGTTTGATTTGCT 60.133 47.619 0.00 0.00 0.00 3.91
475 476 2.597455 AGTCCCACCCTGTTTGATTTG 58.403 47.619 0.00 0.00 0.00 2.32
476 477 4.463050 TTAGTCCCACCCTGTTTGATTT 57.537 40.909 0.00 0.00 0.00 2.17
478 479 4.407365 CTTTTAGTCCCACCCTGTTTGAT 58.593 43.478 0.00 0.00 0.00 2.57
479 480 3.827722 CTTTTAGTCCCACCCTGTTTGA 58.172 45.455 0.00 0.00 0.00 2.69
480 481 2.296190 GCTTTTAGTCCCACCCTGTTTG 59.704 50.000 0.00 0.00 0.00 2.93
481 482 2.091555 TGCTTTTAGTCCCACCCTGTTT 60.092 45.455 0.00 0.00 0.00 2.83
482 483 1.497286 TGCTTTTAGTCCCACCCTGTT 59.503 47.619 0.00 0.00 0.00 3.16
483 484 1.145571 TGCTTTTAGTCCCACCCTGT 58.854 50.000 0.00 0.00 0.00 4.00
485 486 0.404426 GGTGCTTTTAGTCCCACCCT 59.596 55.000 0.00 0.00 41.39 4.34
487 488 1.351350 AGAGGTGCTTTTAGTCCCACC 59.649 52.381 0.57 0.57 46.22 4.61
488 489 2.861147 AGAGGTGCTTTTAGTCCCAC 57.139 50.000 0.00 0.00 0.00 4.61
490 491 3.751518 TCAAAGAGGTGCTTTTAGTCCC 58.248 45.455 0.00 0.00 44.24 4.46
492 493 5.301555 ACTCTCAAAGAGGTGCTTTTAGTC 58.698 41.667 8.71 0.00 46.45 2.59
494 495 5.546526 AGACTCTCAAAGAGGTGCTTTTAG 58.453 41.667 8.71 0.00 46.45 1.85
495 496 5.552870 AGACTCTCAAAGAGGTGCTTTTA 57.447 39.130 8.71 0.00 46.45 1.52
496 497 4.429854 AGACTCTCAAAGAGGTGCTTTT 57.570 40.909 8.71 0.00 46.45 2.27
497 498 4.429854 AAGACTCTCAAAGAGGTGCTTT 57.570 40.909 8.71 0.00 46.45 3.51
499 500 4.429854 AAAAGACTCTCAAAGAGGTGCT 57.570 40.909 8.71 0.83 46.45 4.40
524 525 9.286170 GGACTTTTTCTAGTTCATAGGACTTTT 57.714 33.333 0.00 0.00 31.83 2.27
525 526 8.661345 AGGACTTTTTCTAGTTCATAGGACTTT 58.339 33.333 0.00 0.00 31.83 2.66
526 527 8.208575 AGGACTTTTTCTAGTTCATAGGACTT 57.791 34.615 0.00 0.00 31.83 3.01
528 529 8.198778 CCTAGGACTTTTTCTAGTTCATAGGAC 58.801 40.741 1.05 0.00 34.87 3.85
530 531 8.198778 GTCCTAGGACTTTTTCTAGTTCATAGG 58.801 40.741 31.12 1.99 41.57 2.57
547 548 5.699915 GTGTTTGGTTCTTTAGTCCTAGGAC 59.300 44.000 31.29 31.29 44.86 3.85
548 549 5.221783 GGTGTTTGGTTCTTTAGTCCTAGGA 60.222 44.000 7.62 7.62 0.00 2.94
550 551 5.469084 GTGGTGTTTGGTTCTTTAGTCCTAG 59.531 44.000 0.00 0.00 0.00 3.02
552 553 4.204799 GTGGTGTTTGGTTCTTTAGTCCT 58.795 43.478 0.00 0.00 0.00 3.85
553 554 3.317149 GGTGGTGTTTGGTTCTTTAGTCC 59.683 47.826 0.00 0.00 0.00 3.85
555 556 4.245251 AGGTGGTGTTTGGTTCTTTAGT 57.755 40.909 0.00 0.00 0.00 2.24
556 557 5.826208 ACTTAGGTGGTGTTTGGTTCTTTAG 59.174 40.000 0.00 0.00 0.00 1.85
558 559 4.606210 ACTTAGGTGGTGTTTGGTTCTTT 58.394 39.130 0.00 0.00 0.00 2.52
559 560 4.245251 ACTTAGGTGGTGTTTGGTTCTT 57.755 40.909 0.00 0.00 0.00 2.52
561 562 5.067954 ACATACTTAGGTGGTGTTTGGTTC 58.932 41.667 0.00 0.00 0.00 3.62
562 563 5.056553 ACATACTTAGGTGGTGTTTGGTT 57.943 39.130 0.00 0.00 0.00 3.67
563 564 4.717279 ACATACTTAGGTGGTGTTTGGT 57.283 40.909 0.00 0.00 0.00 3.67
565 566 7.915293 TCAATACATACTTAGGTGGTGTTTG 57.085 36.000 3.78 7.82 31.52 2.93
568 569 7.195374 ACATCAATACATACTTAGGTGGTGT 57.805 36.000 3.91 3.91 32.93 4.16
569 570 9.778741 ATAACATCAATACATACTTAGGTGGTG 57.221 33.333 0.00 0.00 0.00 4.17
660 661 9.253832 TGAAAATACCCATGATTGAGTAACATT 57.746 29.630 0.00 0.00 0.00 2.71
661 662 8.821686 TGAAAATACCCATGATTGAGTAACAT 57.178 30.769 0.00 0.00 0.00 2.71
662 663 8.821686 ATGAAAATACCCATGATTGAGTAACA 57.178 30.769 0.00 0.00 0.00 2.41
663 664 8.352942 GGATGAAAATACCCATGATTGAGTAAC 58.647 37.037 0.00 0.00 0.00 2.50
665 666 6.710295 CGGATGAAAATACCCATGATTGAGTA 59.290 38.462 0.00 0.00 0.00 2.59
666 667 5.532406 CGGATGAAAATACCCATGATTGAGT 59.468 40.000 0.00 0.00 0.00 3.41
667 668 5.563475 GCGGATGAAAATACCCATGATTGAG 60.563 44.000 0.00 0.00 0.00 3.02
668 669 4.278170 GCGGATGAAAATACCCATGATTGA 59.722 41.667 0.00 0.00 0.00 2.57
669 670 4.549458 GCGGATGAAAATACCCATGATTG 58.451 43.478 0.00 0.00 0.00 2.67
670 671 3.253188 CGCGGATGAAAATACCCATGATT 59.747 43.478 0.00 0.00 0.00 2.57
673 674 1.266718 CCGCGGATGAAAATACCCATG 59.733 52.381 24.07 0.00 0.00 3.66
674 675 1.604604 CCGCGGATGAAAATACCCAT 58.395 50.000 24.07 0.00 0.00 4.00
675 676 1.098712 GCCGCGGATGAAAATACCCA 61.099 55.000 33.48 0.00 0.00 4.51
676 677 1.098712 TGCCGCGGATGAAAATACCC 61.099 55.000 33.48 6.69 0.00 3.69
677 678 0.736053 TTGCCGCGGATGAAAATACC 59.264 50.000 33.48 7.30 0.00 2.73
678 679 2.604614 GGATTGCCGCGGATGAAAATAC 60.605 50.000 33.48 15.99 0.00 1.89
679 680 1.606668 GGATTGCCGCGGATGAAAATA 59.393 47.619 33.48 3.73 0.00 1.40
682 683 0.751277 ATGGATTGCCGCGGATGAAA 60.751 50.000 33.48 17.28 36.79 2.69
683 684 0.751277 AATGGATTGCCGCGGATGAA 60.751 50.000 33.48 18.37 36.79 2.57
684 685 0.751277 AAATGGATTGCCGCGGATGA 60.751 50.000 33.48 14.25 36.79 2.92
685 686 0.950836 TAAATGGATTGCCGCGGATG 59.049 50.000 33.48 1.91 36.79 3.51
686 687 1.909700 ATAAATGGATTGCCGCGGAT 58.090 45.000 33.48 15.52 36.79 4.18
687 688 1.686355 AATAAATGGATTGCCGCGGA 58.314 45.000 33.48 9.86 36.79 5.54
688 689 2.507339 AAATAAATGGATTGCCGCGG 57.493 45.000 24.05 24.05 36.79 6.46
689 690 3.186119 ACAAAATAAATGGATTGCCGCG 58.814 40.909 0.00 0.00 36.79 6.46
690 691 6.215845 AGATACAAAATAAATGGATTGCCGC 58.784 36.000 0.00 0.00 36.79 6.53
691 692 7.651808 AGAGATACAAAATAAATGGATTGCCG 58.348 34.615 0.00 0.00 36.79 5.69
702 703 9.914131 CCGTCATCTGATAGAGATACAAAATAA 57.086 33.333 0.00 0.00 39.64 1.40
703 704 9.297037 TCCGTCATCTGATAGAGATACAAAATA 57.703 33.333 0.00 0.00 39.64 1.40
704 705 8.183104 TCCGTCATCTGATAGAGATACAAAAT 57.817 34.615 0.00 0.00 39.64 1.82
705 706 7.582667 TCCGTCATCTGATAGAGATACAAAA 57.417 36.000 0.00 0.00 39.64 2.44
706 707 7.767250 ATCCGTCATCTGATAGAGATACAAA 57.233 36.000 0.00 0.00 39.64 2.83
707 708 8.897752 CATATCCGTCATCTGATAGAGATACAA 58.102 37.037 0.00 0.00 39.64 2.41
708 709 8.267894 TCATATCCGTCATCTGATAGAGATACA 58.732 37.037 0.00 0.00 39.64 2.29
709 710 8.669946 TCATATCCGTCATCTGATAGAGATAC 57.330 38.462 0.00 0.00 39.64 2.24
710 711 9.686683 TTTCATATCCGTCATCTGATAGAGATA 57.313 33.333 0.00 0.00 39.64 1.98
711 712 8.586879 TTTCATATCCGTCATCTGATAGAGAT 57.413 34.615 0.00 0.00 42.70 2.75
712 713 8.409358 TTTTCATATCCGTCATCTGATAGAGA 57.591 34.615 0.00 0.00 34.25 3.10
737 738 8.380743 TGAGCTTGCAAATGAACATAATTTTT 57.619 26.923 0.00 0.00 0.00 1.94
738 739 7.966246 TGAGCTTGCAAATGAACATAATTTT 57.034 28.000 0.00 0.00 0.00 1.82
739 740 7.966246 TTGAGCTTGCAAATGAACATAATTT 57.034 28.000 0.00 0.00 0.00 1.82
740 741 7.966246 TTTGAGCTTGCAAATGAACATAATT 57.034 28.000 0.00 0.00 33.16 1.40
750 751 3.370103 CCATCCCATTTGAGCTTGCAAAT 60.370 43.478 0.00 7.40 46.35 2.32
751 752 2.027929 CCATCCCATTTGAGCTTGCAAA 60.028 45.455 0.00 3.32 41.49 3.68
752 753 1.551430 CCATCCCATTTGAGCTTGCAA 59.449 47.619 0.00 0.00 0.00 4.08
753 754 1.187974 CCATCCCATTTGAGCTTGCA 58.812 50.000 0.00 0.00 0.00 4.08
754 755 1.477553 TCCATCCCATTTGAGCTTGC 58.522 50.000 0.00 0.00 0.00 4.01
755 756 4.280174 CCTTATCCATCCCATTTGAGCTTG 59.720 45.833 0.00 0.00 0.00 4.01
756 757 4.477249 CCTTATCCATCCCATTTGAGCTT 58.523 43.478 0.00 0.00 0.00 3.74
757 758 3.181425 CCCTTATCCATCCCATTTGAGCT 60.181 47.826 0.00 0.00 0.00 4.09
758 759 3.160269 CCCTTATCCATCCCATTTGAGC 58.840 50.000 0.00 0.00 0.00 4.26
759 760 4.459852 ACCCTTATCCATCCCATTTGAG 57.540 45.455 0.00 0.00 0.00 3.02
760 761 7.028760 TCTATACCCTTATCCATCCCATTTGA 58.971 38.462 0.00 0.00 0.00 2.69
761 762 7.270832 TCTATACCCTTATCCATCCCATTTG 57.729 40.000 0.00 0.00 0.00 2.32
762 763 7.905144 TTCTATACCCTTATCCATCCCATTT 57.095 36.000 0.00 0.00 0.00 2.32
763 764 9.588432 TTATTCTATACCCTTATCCATCCCATT 57.412 33.333 0.00 0.00 0.00 3.16
764 765 9.004231 GTTATTCTATACCCTTATCCATCCCAT 57.996 37.037 0.00 0.00 0.00 4.00
765 766 8.191110 AGTTATTCTATACCCTTATCCATCCCA 58.809 37.037 0.00 0.00 0.00 4.37
766 767 8.625467 AGTTATTCTATACCCTTATCCATCCC 57.375 38.462 0.00 0.00 0.00 3.85
770 771 8.877195 GGTGAAGTTATTCTATACCCTTATCCA 58.123 37.037 0.00 0.00 36.33 3.41
771 772 8.319881 GGGTGAAGTTATTCTATACCCTTATCC 58.680 40.741 0.00 0.00 43.35 2.59
772 773 8.877195 TGGGTGAAGTTATTCTATACCCTTATC 58.123 37.037 10.53 0.00 45.18 1.75
773 774 8.808240 TGGGTGAAGTTATTCTATACCCTTAT 57.192 34.615 10.53 0.00 45.18 1.73
774 775 8.808240 ATGGGTGAAGTTATTCTATACCCTTA 57.192 34.615 10.53 0.00 45.18 2.69
775 776 7.707467 ATGGGTGAAGTTATTCTATACCCTT 57.293 36.000 10.53 2.09 45.18 3.95
776 777 7.237055 GGTATGGGTGAAGTTATTCTATACCCT 59.763 40.741 10.53 0.32 45.18 4.34
777 778 7.392418 GGTATGGGTGAAGTTATTCTATACCC 58.608 42.308 0.00 0.00 45.17 3.69
778 779 7.016858 TGGGTATGGGTGAAGTTATTCTATACC 59.983 40.741 12.12 12.12 37.65 2.73
779 780 7.970102 TGGGTATGGGTGAAGTTATTCTATAC 58.030 38.462 0.00 0.00 36.33 1.47
780 781 8.570038 TTGGGTATGGGTGAAGTTATTCTATA 57.430 34.615 0.00 0.00 36.33 1.31
781 782 7.460214 TTGGGTATGGGTGAAGTTATTCTAT 57.540 36.000 0.00 0.00 36.33 1.98
782 783 6.894735 TTGGGTATGGGTGAAGTTATTCTA 57.105 37.500 0.00 0.00 36.33 2.10
783 784 5.789574 TTGGGTATGGGTGAAGTTATTCT 57.210 39.130 0.00 0.00 36.33 2.40
784 785 5.949952 AGTTTGGGTATGGGTGAAGTTATTC 59.050 40.000 0.00 0.00 35.87 1.75
787 788 4.600111 AGAGTTTGGGTATGGGTGAAGTTA 59.400 41.667 0.00 0.00 0.00 2.24
788 789 3.397955 AGAGTTTGGGTATGGGTGAAGTT 59.602 43.478 0.00 0.00 0.00 2.66
789 790 2.986728 AGAGTTTGGGTATGGGTGAAGT 59.013 45.455 0.00 0.00 0.00 3.01
790 791 3.721087 AGAGTTTGGGTATGGGTGAAG 57.279 47.619 0.00 0.00 0.00 3.02
791 792 3.055675 CGTAGAGTTTGGGTATGGGTGAA 60.056 47.826 0.00 0.00 0.00 3.18
792 793 2.498481 CGTAGAGTTTGGGTATGGGTGA 59.502 50.000 0.00 0.00 0.00 4.02
793 794 2.419574 CCGTAGAGTTTGGGTATGGGTG 60.420 54.545 0.00 0.00 0.00 4.61
794 795 1.835531 CCGTAGAGTTTGGGTATGGGT 59.164 52.381 0.00 0.00 0.00 4.51
795 796 1.140252 CCCGTAGAGTTTGGGTATGGG 59.860 57.143 0.00 0.00 38.18 4.00
796 797 2.614829 CCCGTAGAGTTTGGGTATGG 57.385 55.000 0.00 0.00 38.18 2.74
802 803 0.035439 ATGGCACCCGTAGAGTTTGG 60.035 55.000 0.00 0.00 0.00 3.28
803 804 1.369625 GATGGCACCCGTAGAGTTTG 58.630 55.000 0.00 0.00 0.00 2.93
808 809 0.554305 TCTAGGATGGCACCCGTAGA 59.446 55.000 13.65 13.65 0.00 2.59
809 810 0.674534 GTCTAGGATGGCACCCGTAG 59.325 60.000 0.00 2.31 0.00 3.51
810 811 0.757935 GGTCTAGGATGGCACCCGTA 60.758 60.000 0.00 0.00 0.00 4.02
811 812 2.064581 GGTCTAGGATGGCACCCGT 61.065 63.158 0.00 0.00 0.00 5.28
812 813 2.822399 GGTCTAGGATGGCACCCG 59.178 66.667 0.00 0.00 0.00 5.28
813 814 2.808206 CCGGTCTAGGATGGCACCC 61.808 68.421 0.00 0.00 0.00 4.61
814 815 2.822399 CCGGTCTAGGATGGCACC 59.178 66.667 0.00 0.00 0.00 5.01
815 816 2.109181 GCCGGTCTAGGATGGCAC 59.891 66.667 1.90 0.00 46.76 5.01
817 818 2.265467 TTTGGCCGGTCTAGGATGGC 62.265 60.000 7.97 10.45 46.82 4.40
818 819 0.254747 TTTTGGCCGGTCTAGGATGG 59.745 55.000 7.97 0.00 0.00 3.51
819 820 1.743394 GTTTTTGGCCGGTCTAGGATG 59.257 52.381 7.97 0.00 0.00 3.51
820 821 1.633945 AGTTTTTGGCCGGTCTAGGAT 59.366 47.619 7.97 0.00 0.00 3.24
822 823 1.450025 GAGTTTTTGGCCGGTCTAGG 58.550 55.000 7.97 0.00 0.00 3.02
824 825 0.320946 CCGAGTTTTTGGCCGGTCTA 60.321 55.000 7.97 0.00 37.40 2.59
825 826 1.599797 CCGAGTTTTTGGCCGGTCT 60.600 57.895 7.97 0.00 37.40 3.85
851 852 3.220999 GAAAGGTTTGTGCCCCGCC 62.221 63.158 0.00 0.00 0.00 6.13
852 853 2.338620 GAAAGGTTTGTGCCCCGC 59.661 61.111 0.00 0.00 0.00 6.13
854 855 2.570284 CGGGAAAGGTTTGTGCCCC 61.570 63.158 0.00 0.00 35.30 5.80
855 856 1.110518 TTCGGGAAAGGTTTGTGCCC 61.111 55.000 0.00 0.00 35.40 5.36
856 857 0.747852 TTTCGGGAAAGGTTTGTGCC 59.252 50.000 0.00 0.00 0.00 5.01
858 859 3.512033 TTGTTTCGGGAAAGGTTTGTG 57.488 42.857 0.00 0.00 0.00 3.33
892 893 1.663702 CGGACTTCACGCGTTTCCT 60.664 57.895 10.22 0.00 0.00 3.36
893 894 1.952635 ACGGACTTCACGCGTTTCC 60.953 57.895 10.22 12.41 34.00 3.13
1045 1053 3.181500 GGCGCGATATGTTTTTCTTTCCT 60.181 43.478 12.10 0.00 0.00 3.36
1059 1071 1.227527 CATGTTCCTGGGCGCGATA 60.228 57.895 12.10 0.00 0.00 2.92
1067 1079 3.443045 GCGTGGGCATGTTCCTGG 61.443 66.667 8.34 0.00 39.62 4.45
1107 1125 3.019003 TAGAAGCTGGACTGGCCGC 62.019 63.158 8.09 8.09 40.66 6.53
1521 1566 4.147449 CCGAGCGTCATGGCCTGA 62.147 66.667 3.32 2.06 0.00 3.86
1893 2015 2.490217 CCGACGATGGCGAAGTCT 59.510 61.111 0.00 0.00 41.64 3.24
2088 2216 7.606858 TTGTTAGCTTGATTGAGAAGAGATG 57.393 36.000 0.00 0.00 0.00 2.90
2091 2219 7.148507 ACGAATTGTTAGCTTGATTGAGAAGAG 60.149 37.037 0.00 0.00 0.00 2.85
2093 2221 6.835914 ACGAATTGTTAGCTTGATTGAGAAG 58.164 36.000 0.00 0.00 0.00 2.85
2185 2319 9.741647 GAGAAGATAAAATTAAGGGCATGAAAG 57.258 33.333 0.00 0.00 0.00 2.62
2237 2373 4.609691 GCTCGAGCAGTAGTATAGATCC 57.390 50.000 31.91 0.00 41.59 3.36
2294 2430 0.609957 TTCCTGGCTTGCATGGACAG 60.610 55.000 14.05 14.05 39.38 3.51
2333 2469 2.568623 ATTTCTCCACACACTGTCCC 57.431 50.000 0.00 0.00 0.00 4.46
2345 2481 4.023291 TGGCTACAATGGGAAATTTCTCC 58.977 43.478 15.49 15.29 34.41 3.71
2358 2494 2.128771 ACAATCGCCTTGGCTACAAT 57.871 45.000 10.12 0.00 39.30 2.71
2360 2496 1.164411 CAACAATCGCCTTGGCTACA 58.836 50.000 10.12 0.00 39.30 2.74
2533 3103 2.427095 GCTGTCCATGTACCCCATTTTC 59.573 50.000 0.00 0.00 0.00 2.29
2568 3138 3.517500 ACCCAGCCACTCAAAAAGAAAAA 59.482 39.130 0.00 0.00 0.00 1.94
2569 3139 3.103742 ACCCAGCCACTCAAAAAGAAAA 58.896 40.909 0.00 0.00 0.00 2.29
2570 3140 2.745968 ACCCAGCCACTCAAAAAGAAA 58.254 42.857 0.00 0.00 0.00 2.52
2571 3141 2.452600 ACCCAGCCACTCAAAAAGAA 57.547 45.000 0.00 0.00 0.00 2.52
2572 3142 2.173782 TGTACCCAGCCACTCAAAAAGA 59.826 45.455 0.00 0.00 0.00 2.52
2573 3143 2.582052 TGTACCCAGCCACTCAAAAAG 58.418 47.619 0.00 0.00 0.00 2.27
2574 3144 2.738587 TGTACCCAGCCACTCAAAAA 57.261 45.000 0.00 0.00 0.00 1.94
2575 3145 2.513753 CATGTACCCAGCCACTCAAAA 58.486 47.619 0.00 0.00 0.00 2.44
2576 3146 1.271871 CCATGTACCCAGCCACTCAAA 60.272 52.381 0.00 0.00 0.00 2.69
2577 3147 0.327924 CCATGTACCCAGCCACTCAA 59.672 55.000 0.00 0.00 0.00 3.02
2578 3148 0.546507 TCCATGTACCCAGCCACTCA 60.547 55.000 0.00 0.00 0.00 3.41
2579 3149 0.107654 GTCCATGTACCCAGCCACTC 60.108 60.000 0.00 0.00 0.00 3.51
2580 3150 0.840288 TGTCCATGTACCCAGCCACT 60.840 55.000 0.00 0.00 0.00 4.00
2581 3151 0.037590 TTGTCCATGTACCCAGCCAC 59.962 55.000 0.00 0.00 0.00 5.01
2582 3152 0.037590 GTTGTCCATGTACCCAGCCA 59.962 55.000 0.00 0.00 0.00 4.75
2583 3153 0.328258 AGTTGTCCATGTACCCAGCC 59.672 55.000 0.00 0.00 0.00 4.85
2584 3154 2.629051 GTAGTTGTCCATGTACCCAGC 58.371 52.381 0.00 0.00 0.00 4.85
2585 3155 2.232941 ACGTAGTTGTCCATGTACCCAG 59.767 50.000 0.00 0.00 37.78 4.45
2586 3156 2.250031 ACGTAGTTGTCCATGTACCCA 58.750 47.619 0.00 0.00 37.78 4.51
2587 3157 3.193267 TGTACGTAGTTGTCCATGTACCC 59.807 47.826 0.00 0.00 37.78 3.69
2588 3158 4.168760 GTGTACGTAGTTGTCCATGTACC 58.831 47.826 0.00 0.00 37.78 3.34
2589 3159 3.848019 CGTGTACGTAGTTGTCCATGTAC 59.152 47.826 0.00 0.00 37.78 2.90
2590 3160 3.119884 CCGTGTACGTAGTTGTCCATGTA 60.120 47.826 0.00 0.00 37.78 2.29
2591 3161 2.352030 CCGTGTACGTAGTTGTCCATGT 60.352 50.000 0.00 0.00 37.78 3.21
2592 3162 2.256174 CCGTGTACGTAGTTGTCCATG 58.744 52.381 0.00 0.00 37.78 3.66
2593 3163 1.403249 GCCGTGTACGTAGTTGTCCAT 60.403 52.381 0.00 0.00 37.78 3.41
2594 3164 0.039256 GCCGTGTACGTAGTTGTCCA 60.039 55.000 0.00 0.00 37.78 4.02
2595 3165 0.733909 GGCCGTGTACGTAGTTGTCC 60.734 60.000 0.00 0.00 37.78 4.02
2596 3166 0.733909 GGGCCGTGTACGTAGTTGTC 60.734 60.000 0.00 0.00 37.78 3.18
2597 3167 1.290009 GGGCCGTGTACGTAGTTGT 59.710 57.895 0.00 0.00 37.78 3.32
2612 3182 4.503314 GCGCAAATGAGCAGGGGC 62.503 66.667 0.30 0.00 40.65 5.80
2656 3254 0.389948 GTCAAGGATGACGGCTCGTT 60.390 55.000 1.80 0.00 45.94 3.85
2848 6097 6.883217 AGAGCATATTAGTCAAAGGCATATGG 59.117 38.462 4.56 0.00 31.21 2.74
3097 6477 9.467258 CAAATTTCATCTGTTCTTTAGAGCAAA 57.533 29.630 0.00 0.00 34.91 3.68
3113 6493 7.161773 TGAATGACCCTCTTCAAATTTCATC 57.838 36.000 0.00 0.00 0.00 2.92
3161 6541 6.758416 GTCTTAAAGCCATTTCAATCCCATTC 59.242 38.462 0.00 0.00 0.00 2.67
3234 6627 3.703001 TTGAAAGGAGAAGCTACCCTG 57.297 47.619 2.67 0.00 0.00 4.45
3941 7334 0.178958 CGTAGGGCCTAGATCTGGGT 60.179 60.000 24.55 9.23 33.26 4.51
4666 8060 5.285651 CACGCCCAAAAGAAATAACAAGAA 58.714 37.500 0.00 0.00 0.00 2.52
4774 8168 7.013274 TGAGGACCTTTTACTTTGATGAGTTTG 59.987 37.037 0.00 0.00 0.00 2.93
4788 8182 0.034337 AAGCGCGTGAGGACCTTTTA 59.966 50.000 8.43 0.00 0.00 1.52
4845 8239 9.383519 AGTCAATAAATTCTGCTCTTTATCGAA 57.616 29.630 0.00 0.00 29.54 3.71
4846 8240 8.948631 AGTCAATAAATTCTGCTCTTTATCGA 57.051 30.769 0.00 0.00 29.54 3.59
4914 8308 3.638860 TCCTAATCGTTTAGAGGCCTGA 58.361 45.455 12.00 0.00 37.59 3.86
4916 8310 3.325135 CCATCCTAATCGTTTAGAGGCCT 59.675 47.826 3.86 3.86 37.59 5.19
4938 8332 4.309099 TCTACGTTGGTATTGGTTGTGTC 58.691 43.478 0.00 0.00 0.00 3.67
5187 8581 9.330063 CATAGCTTTGGTCTTATATGACTTTGA 57.670 33.333 15.98 3.03 37.16 2.69
5476 8896 2.884639 GGTTATACTTGGCAATGGCGAT 59.115 45.455 0.00 0.00 42.47 4.58
5526 8948 1.133761 AGCACCTAGTATCGAGCTCCA 60.134 52.381 8.47 0.00 0.00 3.86
5548 8970 3.181445 TGACTACAATGGTGGTGCTTCTT 60.181 43.478 0.00 0.00 39.02 2.52
5636 9062 1.621317 TGACGCAGAGGAATGGTTGTA 59.379 47.619 0.00 0.00 0.00 2.41
5755 9182 5.509498 TGCAAAATAGCTTTGACCTCCTAT 58.491 37.500 0.00 0.00 46.35 2.57
5950 9383 2.903855 GATGGGTGATGCCGCTGG 60.904 66.667 0.00 0.00 38.44 4.85
6068 9502 2.818751 TGTGGAGTTGTGGACCTTTT 57.181 45.000 0.00 0.00 0.00 2.27
6129 9563 9.877178 AAAGTAAGCCATATATATGTACTCTGC 57.123 33.333 19.11 14.20 28.71 4.26
6193 9627 7.072076 AGTTTAACACTAGAAAGAAAGGGGAGA 59.928 37.037 0.00 0.00 31.97 3.71
6330 9766 2.807967 CCACCAATGATACCTACATGCG 59.192 50.000 0.00 0.00 0.00 4.73
6367 9805 8.030106 CGGAGAAGAACTAGGAATGATATAACC 58.970 40.741 0.00 0.00 0.00 2.85
6421 9859 3.671716 AGGTCCACCATTCTTTTCGTAC 58.328 45.455 0.00 0.00 38.89 3.67
6520 9958 1.252904 TACCGAACCCACCTCTTCCG 61.253 60.000 0.00 0.00 0.00 4.30
6539 9977 4.042934 ACCAAGAGTGCCCTTGTAAACTAT 59.957 41.667 0.00 0.00 41.34 2.12
6791 10229 9.719355 TGCTGATTCTACAGAAATACTTAAACA 57.281 29.630 0.00 0.00 39.94 2.83
6803 10241 4.285020 AGACCATCTGCTGATTCTACAGA 58.715 43.478 2.92 10.34 44.06 3.41
7027 10465 5.740099 GCTATAGACGTCACTCTTTTCAGTC 59.260 44.000 19.50 0.00 0.00 3.51
7042 10480 1.948145 ACCACTCCGAAGCTATAGACG 59.052 52.381 3.21 5.76 0.00 4.18
7165 10603 4.608890 GCCGCAATTTCATTGTCAAACAAG 60.609 41.667 0.00 0.00 41.94 3.16
7199 10637 5.319453 TGTCAGATTTTGAAGAAGCTCCAT 58.681 37.500 0.00 0.00 37.61 3.41
7220 10658 1.610673 ACTCGACTGCCATCCCTGT 60.611 57.895 0.00 0.00 0.00 4.00
7243 10681 3.186613 GTCTTTGATCCACGTCAAGGTTC 59.813 47.826 0.00 0.00 39.13 3.62
7320 10758 2.288886 ACTCAGCGTCCAAGAACTTACC 60.289 50.000 0.00 0.00 0.00 2.85
7410 10853 6.817765 TTCTTGGAACTAATGGACACATTC 57.182 37.500 0.00 0.00 43.67 2.67
7413 10856 6.549364 ACATTTTCTTGGAACTAATGGACACA 59.451 34.615 0.00 0.00 32.04 3.72
7456 10899 4.153475 ACGAATACATGGTTACACAACAGC 59.847 41.667 0.00 0.00 36.29 4.40
7567 11019 6.346919 GCTTCAACAAGATATATACGCTGGTG 60.347 42.308 0.00 0.00 0.00 4.17
7655 16009 8.944927 GCGACTAGTAGTTTTCTTTTCTTTTTG 58.055 33.333 3.85 0.00 0.00 2.44
7661 17810 6.367969 TCCATGCGACTAGTAGTTTTCTTTTC 59.632 38.462 3.85 0.00 0.00 2.29
7663 17812 5.790593 TCCATGCGACTAGTAGTTTTCTTT 58.209 37.500 3.85 0.00 0.00 2.52
7664 17813 5.401531 TCCATGCGACTAGTAGTTTTCTT 57.598 39.130 3.85 0.00 0.00 2.52
7665 17814 4.678309 GCTCCATGCGACTAGTAGTTTTCT 60.678 45.833 3.85 0.00 0.00 2.52
7666 17815 3.552294 GCTCCATGCGACTAGTAGTTTTC 59.448 47.826 3.85 0.00 0.00 2.29
7667 17816 3.522553 GCTCCATGCGACTAGTAGTTTT 58.477 45.455 3.85 0.00 0.00 2.43
7668 17817 2.159085 GGCTCCATGCGACTAGTAGTTT 60.159 50.000 3.85 0.00 44.05 2.66
7669 17818 1.409427 GGCTCCATGCGACTAGTAGTT 59.591 52.381 3.85 0.00 44.05 2.24
7718 17867 3.695830 TGAGGATGTACTTGGTCCAAC 57.304 47.619 0.00 0.00 34.42 3.77
7732 17881 2.426024 GCTGACAAACATGCATGAGGAT 59.574 45.455 32.75 14.97 0.00 3.24
7755 17904 2.034842 GTGTAACATCGAGCGATTTCCG 60.035 50.000 2.12 0.00 37.96 4.30
7769 17926 2.163010 GACCTTCCGATCTCGTGTAACA 59.837 50.000 0.00 0.00 35.74 2.41
7800 17962 4.077822 CCTTTTGTTCTCTTCTCAGCCAT 58.922 43.478 0.00 0.00 0.00 4.40
7804 17966 4.455606 ACCACCTTTTGTTCTCTTCTCAG 58.544 43.478 0.00 0.00 0.00 3.35
7832 17995 2.286365 TTTCCGGCCAAAATCTGAGT 57.714 45.000 2.24 0.00 0.00 3.41
7833 17996 2.558359 ACTTTTCCGGCCAAAATCTGAG 59.442 45.455 2.24 0.00 0.00 3.35
7834 17997 2.556622 GACTTTTCCGGCCAAAATCTGA 59.443 45.455 2.24 0.00 0.00 3.27
7835 17998 2.558359 AGACTTTTCCGGCCAAAATCTG 59.442 45.455 2.24 0.00 0.00 2.90
7836 17999 2.876581 AGACTTTTCCGGCCAAAATCT 58.123 42.857 2.24 0.00 0.00 2.40
7837 18000 3.660501 AAGACTTTTCCGGCCAAAATC 57.339 42.857 2.24 0.00 0.00 2.17
7838 18001 4.126437 CAAAAGACTTTTCCGGCCAAAAT 58.874 39.130 10.28 0.00 0.00 1.82
7839 18002 3.055747 ACAAAAGACTTTTCCGGCCAAAA 60.056 39.130 10.28 1.73 0.00 2.44
7858 18021 1.067706 CACCCGTCACATACCGTACAA 60.068 52.381 0.00 0.00 0.00 2.41
7859 18022 0.527113 CACCCGTCACATACCGTACA 59.473 55.000 0.00 0.00 0.00 2.90
7871 18034 1.440476 CCCTATCGTTCCACCCGTC 59.560 63.158 0.00 0.00 0.00 4.79
7905 18074 2.417933 ACTACGGCACTACTACGTTCAG 59.582 50.000 0.00 0.00 41.53 3.02
7908 18077 1.135575 GCACTACGGCACTACTACGTT 60.136 52.381 0.00 0.00 41.53 3.99
7920 18089 2.439701 TCTCGGGAGGCACTACGG 60.440 66.667 0.00 0.00 43.09 4.02
7943 18112 1.620819 ACTTTGGACTCAGACGCTCAT 59.379 47.619 0.00 0.00 0.00 2.90
7952 18121 3.938963 GTGAAGTGTGAACTTTGGACTCA 59.061 43.478 0.00 0.00 0.00 3.41
8000 18169 1.979155 GCAGGTTCTTTCTGGGGGC 60.979 63.158 0.00 0.00 33.16 5.80
8013 18182 1.001641 GAGTGAATGCCCTGCAGGT 60.002 57.895 30.63 13.02 43.65 4.00
8017 18186 1.503542 CAACGAGTGAATGCCCTGC 59.496 57.895 0.00 0.00 0.00 4.85
8062 18231 0.317020 GTGCCGAGCTTGTGTTTGTC 60.317 55.000 0.00 0.00 0.00 3.18
8115 18289 3.399330 CAACTCTAGGGTTTTCGAGCAA 58.601 45.455 4.88 0.00 0.00 3.91
8116 18290 2.870435 GCAACTCTAGGGTTTTCGAGCA 60.870 50.000 4.88 0.00 0.00 4.26
8117 18291 1.732809 GCAACTCTAGGGTTTTCGAGC 59.267 52.381 4.88 1.79 0.00 5.03
8118 18292 1.993370 CGCAACTCTAGGGTTTTCGAG 59.007 52.381 17.53 3.68 0.00 4.04
8119 18293 1.342174 ACGCAACTCTAGGGTTTTCGA 59.658 47.619 25.20 0.00 0.00 3.71
8120 18294 1.792006 ACGCAACTCTAGGGTTTTCG 58.208 50.000 19.67 19.67 0.00 3.46
8121 18295 2.483106 GGAACGCAACTCTAGGGTTTTC 59.517 50.000 4.88 7.53 41.43 2.29
8122 18296 2.158726 TGGAACGCAACTCTAGGGTTTT 60.159 45.455 4.88 0.00 41.43 2.43
8123 18297 1.418637 TGGAACGCAACTCTAGGGTTT 59.581 47.619 4.88 0.00 41.43 3.27
8124 18298 1.002087 CTGGAACGCAACTCTAGGGTT 59.998 52.381 0.85 0.85 43.61 4.11
8125 18299 0.608640 CTGGAACGCAACTCTAGGGT 59.391 55.000 0.00 0.00 0.00 4.34
8126 18300 0.741221 GCTGGAACGCAACTCTAGGG 60.741 60.000 0.00 0.00 0.00 3.53
8127 18301 0.741221 GGCTGGAACGCAACTCTAGG 60.741 60.000 0.00 0.00 0.00 3.02
8128 18302 0.037326 TGGCTGGAACGCAACTCTAG 60.037 55.000 0.00 0.00 0.00 2.43
8129 18303 0.037326 CTGGCTGGAACGCAACTCTA 60.037 55.000 0.00 0.00 0.00 2.43
8130 18304 1.302033 CTGGCTGGAACGCAACTCT 60.302 57.895 0.00 0.00 0.00 3.24
8131 18305 0.674895 ATCTGGCTGGAACGCAACTC 60.675 55.000 0.00 0.00 0.00 3.01
8132 18306 0.957395 CATCTGGCTGGAACGCAACT 60.957 55.000 0.00 0.00 0.00 3.16
8133 18307 0.955428 TCATCTGGCTGGAACGCAAC 60.955 55.000 0.00 0.00 0.00 4.17
8134 18308 0.250684 TTCATCTGGCTGGAACGCAA 60.251 50.000 0.00 0.00 0.00 4.85
8135 18309 0.955428 GTTCATCTGGCTGGAACGCA 60.955 55.000 0.00 0.00 32.57 5.24
8136 18310 1.648467 GGTTCATCTGGCTGGAACGC 61.648 60.000 0.00 0.00 41.31 4.84
8137 18311 0.036010 AGGTTCATCTGGCTGGAACG 60.036 55.000 0.00 0.00 41.31 3.95
8138 18312 1.003580 TCAGGTTCATCTGGCTGGAAC 59.996 52.381 0.00 0.00 40.04 3.62
8139 18313 1.361204 TCAGGTTCATCTGGCTGGAA 58.639 50.000 0.00 0.00 35.58 3.53
8140 18314 1.211212 CATCAGGTTCATCTGGCTGGA 59.789 52.381 0.00 0.00 35.58 3.86
8141 18315 1.211212 TCATCAGGTTCATCTGGCTGG 59.789 52.381 0.00 0.00 35.58 4.85
8142 18316 2.704464 TCATCAGGTTCATCTGGCTG 57.296 50.000 0.00 0.00 35.58 4.85
8161 18335 4.701765 CTCAATTCCTTGATCTCGGTGAT 58.298 43.478 0.00 0.00 40.52 3.06
8193 18367 2.027625 GACGGTGCGAACCAGGAAG 61.028 63.158 14.51 0.00 0.00 3.46
8195 18369 4.351938 CGACGGTGCGAACCAGGA 62.352 66.667 14.51 0.00 0.00 3.86
8198 18372 4.953868 CCACGACGGTGCGAACCA 62.954 66.667 14.51 0.00 43.00 3.67
8207 18381 0.675522 AAATGCCCTAACCACGACGG 60.676 55.000 0.00 0.00 42.50 4.79
8208 18382 0.725117 GAAATGCCCTAACCACGACG 59.275 55.000 0.00 0.00 0.00 5.12
8209 18383 2.109425 AGAAATGCCCTAACCACGAC 57.891 50.000 0.00 0.00 0.00 4.34
8210 18384 3.602483 GTTAGAAATGCCCTAACCACGA 58.398 45.455 0.00 0.00 39.80 4.35
8220 18394 2.640316 AGGGATCGGTTAGAAATGCC 57.360 50.000 0.00 0.00 0.00 4.40
8238 18412 4.990257 TCACTCTTCGAACCGGTTATAAG 58.010 43.478 22.33 24.11 0.00 1.73
8239 18413 5.389859 TTCACTCTTCGAACCGGTTATAA 57.610 39.130 22.33 16.07 0.00 0.98
8251 18425 4.992381 AAGACCGAATTTTCACTCTTCG 57.008 40.909 0.00 0.00 40.96 3.79
8254 18428 7.803279 AAAAGTAAGACCGAATTTTCACTCT 57.197 32.000 0.00 0.00 0.00 3.24
8277 18451 5.938125 GGGATCGGCTAGATGCTAATTAAAA 59.062 40.000 12.12 0.00 45.63 1.52
8283 18457 1.267121 GGGGATCGGCTAGATGCTAA 58.733 55.000 12.12 0.00 45.63 3.09
8286 18460 0.326264 ATTGGGGATCGGCTAGATGC 59.674 55.000 0.00 5.87 45.62 3.91
8287 18461 2.704572 GAATTGGGGATCGGCTAGATG 58.295 52.381 0.00 0.00 40.26 2.90
8289 18463 0.679505 CGAATTGGGGATCGGCTAGA 59.320 55.000 0.00 0.00 35.49 2.43
8306 18480 3.806591 CTTTGCTCCCTTACGACGA 57.193 52.632 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.