Multiple sequence alignment - TraesCS5A01G439400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G439400 chr5A 100.000 3551 0 0 1621 5171 620998303 621001853 0.000000e+00 6558.0
1 TraesCS5A01G439400 chr5A 100.000 1632 0 0 5544 7175 621002226 621003857 0.000000e+00 3014.0
2 TraesCS5A01G439400 chr5A 100.000 1311 0 0 1 1311 620996683 620997993 0.000000e+00 2422.0
3 TraesCS5A01G439400 chr5A 90.865 208 19 0 4964 5171 621001601 621001808 5.480000e-71 279.0
4 TraesCS5A01G439400 chr5A 90.865 208 19 0 4919 5126 621001646 621001853 5.480000e-71 279.0
5 TraesCS5A01G439400 chr5A 93.789 161 7 1 3900 4057 621000429 621000589 9.300000e-59 239.0
6 TraesCS5A01G439400 chr5A 93.789 161 7 1 3747 3907 621000582 621000739 9.300000e-59 239.0
7 TraesCS5A01G439400 chr5A 96.825 63 2 0 5544 5606 621001678 621001740 9.840000e-19 106.0
8 TraesCS5A01G439400 chr5D 94.943 3500 115 13 1627 5100 496912817 496916280 0.000000e+00 5426.0
9 TraesCS5A01G439400 chr5D 91.611 1347 66 19 1 1311 496911131 496912466 0.000000e+00 1818.0
10 TraesCS5A01G439400 chr5D 91.214 1104 47 13 5764 6830 496916606 496917696 0.000000e+00 1456.0
11 TraesCS5A01G439400 chr5D 97.165 388 11 0 5544 5931 496916221 496916608 0.000000e+00 656.0
12 TraesCS5A01G439400 chr5D 93.407 182 12 0 4964 5145 496916099 496916280 3.300000e-68 270.0
13 TraesCS5A01G439400 chr5D 92.547 161 9 1 3747 3907 496915080 496915237 2.010000e-55 228.0
14 TraesCS5A01G439400 chr5D 91.925 161 10 1 3900 4057 496914927 496915087 9.370000e-54 222.0
15 TraesCS5A01G439400 chr5D 95.082 122 5 1 7009 7130 496917700 496917820 2.640000e-44 191.0
16 TraesCS5A01G439400 chr5D 94.595 111 6 0 5061 5171 496916106 496916216 9.570000e-39 172.0
17 TraesCS5A01G439400 chr5D 98.413 63 1 0 5544 5606 496916176 496916238 2.120000e-20 111.0
18 TraesCS5A01G439400 chr5D 98.333 60 1 0 5544 5603 496916131 496916190 9.840000e-19 106.0
19 TraesCS5A01G439400 chr5D 94.872 39 2 0 5688 5726 496916550 496916588 2.160000e-05 62.1
20 TraesCS5A01G439400 chr5B 95.425 1705 49 8 2379 4057 615700788 615702489 0.000000e+00 2689.0
21 TraesCS5A01G439400 chr5B 96.054 1419 53 1 3747 5165 615702332 615703747 0.000000e+00 2307.0
22 TraesCS5A01G439400 chr5B 91.594 1368 53 20 2 1311 615697892 615699255 0.000000e+00 1832.0
23 TraesCS5A01G439400 chr5B 93.648 976 43 7 5764 6729 615704143 615705109 0.000000e+00 1441.0
24 TraesCS5A01G439400 chr5B 90.241 748 31 7 1636 2382 615699460 615700166 0.000000e+00 939.0
25 TraesCS5A01G439400 chr5B 97.416 387 10 0 5544 5930 615703758 615704144 0.000000e+00 660.0
26 TraesCS5A01G439400 chr5B 93.089 246 17 0 4926 5171 615703553 615703798 1.900000e-95 361.0
27 TraesCS5A01G439400 chr5B 91.845 233 19 0 4913 5145 615703585 615703817 6.940000e-85 326.0
28 TraesCS5A01G439400 chr5B 93.069 202 14 0 4964 5165 615703501 615703702 5.440000e-76 296.0
29 TraesCS5A01G439400 chr5B 91.489 188 16 0 4913 5100 615703630 615703817 7.140000e-65 259.0
30 TraesCS5A01G439400 chr5B 93.168 161 8 1 3900 4057 615702179 615702339 4.330000e-57 233.0
31 TraesCS5A01G439400 chr5B 93.168 161 8 1 3747 3907 615702482 615702639 4.330000e-57 233.0
32 TraesCS5A01G439400 chr5B 91.176 102 8 1 6908 7008 505792718 505792617 3.490000e-28 137.0
33 TraesCS5A01G439400 chr5B 89.796 98 10 0 4913 5010 615703720 615703817 7.560000e-25 126.0
34 TraesCS5A01G439400 chr5B 100.000 60 0 0 5544 5603 615703578 615703637 2.120000e-20 111.0
35 TraesCS5A01G439400 chr5B 98.333 60 1 0 5544 5603 615703623 615703682 9.840000e-19 106.0
36 TraesCS5A01G439400 chr5B 98.333 60 1 0 5544 5603 615703668 615703727 9.840000e-19 106.0
37 TraesCS5A01G439400 chr5B 96.825 63 2 0 5544 5606 615703713 615703775 9.840000e-19 106.0
38 TraesCS5A01G439400 chr5B 94.595 37 2 0 5690 5726 615704254 615704290 2.800000e-04 58.4
39 TraesCS5A01G439400 chr5B 100.000 30 0 0 6751 6780 615705160 615705189 1.000000e-03 56.5
40 TraesCS5A01G439400 chr2D 93.548 124 8 0 6885 7008 19392070 19391947 1.230000e-42 185.0
41 TraesCS5A01G439400 chr6A 89.908 109 11 0 6885 6993 612302733 612302625 2.700000e-29 141.0
42 TraesCS5A01G439400 chr4D 94.737 38 2 0 6425 6462 79215297 79215260 7.770000e-05 60.2
43 TraesCS5A01G439400 chr4A 100.000 29 0 0 6434 6462 506717260 506717288 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G439400 chr5A 620996683 621003857 7174 False 1642.000000 6558 95.766625 1 7175 8 chr5A.!!$F1 7174
1 TraesCS5A01G439400 chr5D 496911131 496917820 6689 False 893.175000 5426 94.508917 1 7130 12 chr5D.!!$F1 7129
2 TraesCS5A01G439400 chr5B 615697892 615705189 7297 False 644.521053 2689 94.636211 2 6780 19 chr5B.!!$F1 6778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 313 1.000274 GCCCAGTTTGTGCCTTTGTAG 60.000 52.381 0.00 0.0 0.0 2.74 F
407 426 1.301401 CCCCGTTCTTGTCAAGCGA 60.301 57.895 7.78 0.0 0.0 4.93 F
2247 2343 0.322187 CGTGGTTGGGGGAGGTTAAG 60.322 60.000 0.00 0.0 0.0 1.85 F
3105 3846 1.342874 CCCTCTCACCATCTCTGTCCT 60.343 57.143 0.00 0.0 0.0 3.85 F
5026 5968 0.034283 GTGGTAGGAGGAGGTCGAGT 60.034 60.000 0.00 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2229 2325 1.069775 TCTTAACCTCCCCCAACCAC 58.930 55.000 0.0 0.0 0.00 4.16 R
2382 3103 2.043526 ACTGGCCCAAAATGGATTCTCT 59.956 45.455 0.0 0.0 40.96 3.10 R
4176 5073 0.251634 CTCTTCAGCCTGTTCCTCCC 59.748 60.000 0.0 0.0 0.00 4.30 R
5007 5949 0.034283 ACTCGACCTCCTCCTACCAC 60.034 60.000 0.0 0.0 0.00 4.16 R
6965 8226 0.030908 GTACAGGAATCTCGGGAGCG 59.969 60.000 0.0 0.0 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 7.488150 TGTTGTTTCGTTGTTATGTGCAAATTA 59.512 29.630 0.00 0.00 0.00 1.40
123 124 4.635765 TGTTTTCTTCACTGACCTCTTGTG 59.364 41.667 0.00 0.00 0.00 3.33
129 130 1.808945 CACTGACCTCTTGTGGATTGC 59.191 52.381 0.00 0.00 0.00 3.56
222 239 2.071778 AAAGACAGGCCTTTCTTGCA 57.928 45.000 30.18 0.00 32.26 4.08
243 260 5.047377 TGCAATGGATTAGTTTCCCTTTCAC 60.047 40.000 0.00 0.00 34.67 3.18
294 313 1.000274 GCCCAGTTTGTGCCTTTGTAG 60.000 52.381 0.00 0.00 0.00 2.74
313 332 5.632118 TGTAGGGTTTGTTTACATGGCTTA 58.368 37.500 0.00 0.00 0.00 3.09
314 333 5.474189 TGTAGGGTTTGTTTACATGGCTTAC 59.526 40.000 0.00 0.00 0.00 2.34
358 377 7.141758 TGAGTAAAGCAGATAATTCCCTGAT 57.858 36.000 10.22 2.33 32.37 2.90
402 421 2.299867 GGTTAGTACCCCGTTCTTGTCA 59.700 50.000 0.00 0.00 38.60 3.58
407 426 1.301401 CCCCGTTCTTGTCAAGCGA 60.301 57.895 7.78 0.00 0.00 4.93
439 458 5.813513 AACCTTTGAATCCAATCTGCTTT 57.186 34.783 0.00 0.00 31.46 3.51
440 459 6.916360 AACCTTTGAATCCAATCTGCTTTA 57.084 33.333 0.00 0.00 31.46 1.85
441 460 6.272822 ACCTTTGAATCCAATCTGCTTTAC 57.727 37.500 0.00 0.00 31.46 2.01
442 461 6.012745 ACCTTTGAATCCAATCTGCTTTACT 58.987 36.000 0.00 0.00 31.46 2.24
443 462 6.151817 ACCTTTGAATCCAATCTGCTTTACTC 59.848 38.462 0.00 0.00 31.46 2.59
445 464 7.147949 CCTTTGAATCCAATCTGCTTTACTCAT 60.148 37.037 0.00 0.00 31.46 2.90
447 466 8.442632 TTGAATCCAATCTGCTTTACTCATAG 57.557 34.615 0.00 0.00 0.00 2.23
448 467 7.568349 TGAATCCAATCTGCTTTACTCATAGT 58.432 34.615 0.00 0.00 0.00 2.12
449 468 8.049117 TGAATCCAATCTGCTTTACTCATAGTT 58.951 33.333 0.00 0.00 0.00 2.24
450 469 9.547753 GAATCCAATCTGCTTTACTCATAGTTA 57.452 33.333 0.00 0.00 0.00 2.24
524 559 9.349713 TGCTAGTATTTACTTAATTCAATGGGG 57.650 33.333 0.00 0.00 37.73 4.96
609 655 2.043664 ACCTCCAGGAACATCAGAGAGA 59.956 50.000 0.00 0.00 38.94 3.10
641 687 9.093458 TGAGAATGACCTTAGATATGCATCTTA 57.907 33.333 0.19 0.00 41.84 2.10
642 688 9.585099 GAGAATGACCTTAGATATGCATCTTAG 57.415 37.037 0.19 0.00 41.84 2.18
646 692 8.116651 TGACCTTAGATATGCATCTTAGAGAC 57.883 38.462 0.19 0.00 39.33 3.36
649 695 8.394822 ACCTTAGATATGCATCTTAGAGACCTA 58.605 37.037 0.19 0.00 39.33 3.08
769 815 2.415625 GCGTAGTGGTGACGAAGAAGAT 60.416 50.000 0.00 0.00 42.98 2.40
802 848 6.834107 TGATGGTGATGATGATTACAGTGAT 58.166 36.000 0.00 0.00 0.00 3.06
892 938 3.268330 CAGTGATGATTACAGCTGCACT 58.732 45.455 15.27 13.98 35.70 4.40
1048 1094 2.605837 TGACCGCAAACACTACTGAA 57.394 45.000 0.00 0.00 0.00 3.02
1053 1099 3.880490 ACCGCAAACACTACTGAATTGAA 59.120 39.130 0.00 0.00 0.00 2.69
1249 1308 6.084326 TGTAGAACCTTGAAAGCCAAATTC 57.916 37.500 0.00 0.00 33.76 2.17
1261 1320 4.890158 AGCCAAATTCGGGAATTTCTTT 57.110 36.364 14.67 3.15 46.01 2.52
1263 1322 5.965922 AGCCAAATTCGGGAATTTCTTTAG 58.034 37.500 14.67 5.61 46.01 1.85
1851 1946 7.496920 CACTAGAAGATATCATTTCTGTTGGCA 59.503 37.037 14.48 0.00 35.42 4.92
1937 2032 7.615365 AGGGCTATCAATTTCTATTTGTTGACA 59.385 33.333 0.00 0.00 33.85 3.58
1938 2033 8.416329 GGGCTATCAATTTCTATTTGTTGACAT 58.584 33.333 0.00 0.00 33.85 3.06
1939 2034 9.807649 GGCTATCAATTTCTATTTGTTGACATT 57.192 29.630 0.00 0.00 33.85 2.71
1948 2043 8.815141 TTCTATTTGTTGACATTTCACAATGG 57.185 30.769 0.31 0.00 43.82 3.16
1949 2044 8.175925 TCTATTTGTTGACATTTCACAATGGA 57.824 30.769 0.31 0.00 43.82 3.41
1950 2045 8.805175 TCTATTTGTTGACATTTCACAATGGAT 58.195 29.630 0.31 0.00 43.82 3.41
1951 2046 7.894376 ATTTGTTGACATTTCACAATGGATC 57.106 32.000 0.31 0.00 43.82 3.36
1952 2047 6.402456 TTGTTGACATTTCACAATGGATCA 57.598 33.333 0.00 0.00 43.82 2.92
1953 2048 6.593268 TGTTGACATTTCACAATGGATCAT 57.407 33.333 0.00 0.00 43.82 2.45
1954 2049 6.995364 TGTTGACATTTCACAATGGATCATT 58.005 32.000 0.00 0.00 43.82 2.57
1955 2050 7.443477 TGTTGACATTTCACAATGGATCATTT 58.557 30.769 0.00 0.00 43.82 2.32
1956 2051 7.932491 TGTTGACATTTCACAATGGATCATTTT 59.068 29.630 0.00 0.00 43.82 1.82
1957 2052 8.776470 GTTGACATTTCACAATGGATCATTTTT 58.224 29.630 0.00 0.00 43.82 1.94
2076 2171 6.380846 TGCTATGGTATCTTTGGAGCAATTTT 59.619 34.615 0.00 0.00 35.63 1.82
2229 2325 4.536065 TCAAGAACTAATGTTTGCTTGCG 58.464 39.130 0.00 0.00 37.65 4.85
2247 2343 0.322187 CGTGGTTGGGGGAGGTTAAG 60.322 60.000 0.00 0.00 0.00 1.85
2275 2371 8.510505 ACTTGAGATTAACATGAAAGAGAAAGC 58.489 33.333 0.00 0.00 0.00 3.51
2312 2408 6.787085 AAGTCTTCTTACTGGAATTCAACG 57.213 37.500 7.93 0.00 31.46 4.10
2367 2463 8.437742 CCAGCAAATTGAACAAATAAGACATTC 58.562 33.333 0.00 0.00 0.00 2.67
2382 3103 9.739276 AATAAGACATTCTCCAGTATTTTCACA 57.261 29.630 0.00 0.00 0.00 3.58
2395 3116 8.526147 CCAGTATTTTCACAGAGAATCCATTTT 58.474 33.333 0.00 0.00 35.83 1.82
2620 3360 4.885413 TCCTGGCTCAAATTTGTGATTTG 58.115 39.130 21.28 8.54 39.61 2.32
2624 3364 6.038492 CCTGGCTCAAATTTGTGATTTGTTTT 59.962 34.615 21.28 0.00 39.36 2.43
2788 3528 1.680735 TGGCATGTGGTTTGTTGAGAC 59.319 47.619 0.00 0.00 0.00 3.36
2789 3529 1.680735 GGCATGTGGTTTGTTGAGACA 59.319 47.619 0.00 0.00 0.00 3.41
2796 3536 2.100584 TGGTTTGTTGAGACAATGGTGC 59.899 45.455 0.00 0.00 44.71 5.01
2808 3548 2.890945 ACAATGGTGCCCTTTGTAGTTC 59.109 45.455 17.95 0.00 45.72 3.01
2817 3557 1.804748 CCTTTGTAGTTCTGCGGTTCC 59.195 52.381 0.00 0.00 0.00 3.62
2833 3573 5.830457 TGCGGTTCCCATTCAATGATAATTA 59.170 36.000 0.00 0.00 0.00 1.40
2865 3605 4.081406 TCCAATGAGTATGCTTGTTGCTT 58.919 39.130 4.36 0.00 43.37 3.91
2871 3612 7.636150 ATGAGTATGCTTGTTGCTTATTTCT 57.364 32.000 0.00 0.00 43.37 2.52
2872 3613 7.452880 TGAGTATGCTTGTTGCTTATTTCTT 57.547 32.000 0.00 0.00 43.37 2.52
2922 3663 7.331934 TCATCATACTCTAAACTTGCTTGTGTC 59.668 37.037 0.00 0.00 0.00 3.67
2945 3686 5.185249 TCCATCCTGTGTCTTACTAAGTGAC 59.815 44.000 0.00 0.00 0.00 3.67
3091 3832 2.611225 ATGATTCGAAGTGCCCTCTC 57.389 50.000 3.35 0.00 0.00 3.20
3105 3846 1.342874 CCCTCTCACCATCTCTGTCCT 60.343 57.143 0.00 0.00 0.00 3.85
3155 3902 7.288810 TCTTCCATTTTAAAGTGTGCATTCT 57.711 32.000 9.54 0.00 0.00 2.40
3253 4000 4.202336 CCTGATGATACTGATGGAGCTTGT 60.202 45.833 0.00 0.00 0.00 3.16
3256 4003 4.397481 TGATACTGATGGAGCTTGTGAG 57.603 45.455 0.00 0.00 0.00 3.51
3417 4164 6.358974 AAAATGTTTCCCAAGGTATTCTGG 57.641 37.500 0.00 0.00 0.00 3.86
3473 4220 9.430623 TGATTGTCTCGTTCTCATTACATTTAA 57.569 29.630 0.00 0.00 0.00 1.52
3570 4317 8.396272 AGAATTATCATTTACTGTGGGTATGC 57.604 34.615 0.00 0.00 0.00 3.14
3759 4506 6.991531 ACACATTGCATTGACCAAATAAAGTT 59.008 30.769 15.20 0.00 0.00 2.66
3771 4518 5.179929 ACCAAATAAAGTTAACTCCCGTTCG 59.820 40.000 8.95 0.00 34.59 3.95
3812 4559 9.520204 CAAGAAATCTTGCTAAGAAGAAAACAA 57.480 29.630 10.00 0.00 45.59 2.83
3847 4594 7.809806 GGTAAAAGGAAAATGAACACTGATCAG 59.190 37.037 21.37 21.37 0.00 2.90
3992 4889 5.646360 ACTGGTAAAAGGAATATGAACACCG 59.354 40.000 0.00 0.00 0.00 4.94
4076 4973 7.935755 ACCAGATCCAAACAGTAGATATGAATG 59.064 37.037 4.95 0.00 32.29 2.67
4117 5014 1.425448 CCAAAAGGGAGAGGTGTCCTT 59.575 52.381 0.00 0.00 42.16 3.36
4138 5035 3.664107 TGAGAAAGAGACCATCCGTTTG 58.336 45.455 0.00 0.00 0.00 2.93
4168 5065 5.474532 AGCACACAATGATGAGCTAGAAAAA 59.525 36.000 0.00 0.00 33.42 1.94
4176 5073 9.512435 CAATGATGAGCTAGAAAAACTTATTGG 57.488 33.333 0.00 0.00 0.00 3.16
4318 5215 0.461135 GATTACCTGACGGGCGGTTA 59.539 55.000 0.00 0.00 39.10 2.85
4416 5313 7.600960 TGCAATGATAATAACAAAGCAACAGA 58.399 30.769 0.00 0.00 31.81 3.41
4557 5454 1.348696 TGCTCATCAAAGTCCTCAGCA 59.651 47.619 0.00 0.00 33.08 4.41
4613 5510 7.433425 GTCAAAGTTCTTGTTCCTCATCAAAAG 59.567 37.037 0.00 0.00 0.00 2.27
4717 5614 8.869109 AGAGAAGAGTGGAGAAATAATATGAGG 58.131 37.037 0.00 0.00 0.00 3.86
4735 5632 6.865651 ATGAGGGAAAATTCTTATAGGGGT 57.134 37.500 0.00 0.00 0.00 4.95
4902 5799 7.389803 AATGTCGTGATGATTATTCCAAACA 57.610 32.000 0.00 0.00 0.00 2.83
4941 5838 0.959372 GGAAGGAGGTCGAGTCGTCA 60.959 60.000 13.12 0.00 0.00 4.35
5007 5949 3.851458 TGAGGATCATTCCACTGATGG 57.149 47.619 0.00 0.00 42.56 3.51
5008 5950 3.117745 TGAGGATCATTCCACTGATGGT 58.882 45.455 0.00 0.00 43.89 3.55
5009 5951 3.118149 TGAGGATCATTCCACTGATGGTG 60.118 47.826 0.00 0.00 43.89 4.17
5018 5960 1.866015 CACTGATGGTGGTAGGAGGA 58.134 55.000 0.00 0.00 41.90 3.71
5019 5961 1.759445 CACTGATGGTGGTAGGAGGAG 59.241 57.143 0.00 0.00 41.90 3.69
5020 5962 1.343478 ACTGATGGTGGTAGGAGGAGG 60.343 57.143 0.00 0.00 0.00 4.30
5021 5963 0.716591 TGATGGTGGTAGGAGGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
5022 5964 1.343075 TGATGGTGGTAGGAGGAGGTC 60.343 57.143 0.00 0.00 0.00 3.85
5023 5965 0.397254 ATGGTGGTAGGAGGAGGTCG 60.397 60.000 0.00 0.00 0.00 4.79
5024 5966 1.305623 GGTGGTAGGAGGAGGTCGA 59.694 63.158 0.00 0.00 0.00 4.20
5025 5967 0.752376 GGTGGTAGGAGGAGGTCGAG 60.752 65.000 0.00 0.00 0.00 4.04
5026 5968 0.034283 GTGGTAGGAGGAGGTCGAGT 60.034 60.000 0.00 0.00 0.00 4.18
5027 5969 0.255318 TGGTAGGAGGAGGTCGAGTC 59.745 60.000 0.00 0.00 0.00 3.36
5028 5970 0.255318 GGTAGGAGGAGGTCGAGTCA 59.745 60.000 0.00 0.00 0.00 3.41
5029 5971 1.133730 GGTAGGAGGAGGTCGAGTCAT 60.134 57.143 0.00 0.00 0.00 3.06
5030 5972 2.223745 GTAGGAGGAGGTCGAGTCATC 58.776 57.143 1.58 1.58 0.00 2.92
5044 5986 4.230657 CGAGTCATCGTGAGGATTATTCC 58.769 47.826 0.00 0.00 44.09 3.01
5045 5987 4.261614 CGAGTCATCGTGAGGATTATTCCA 60.262 45.833 6.44 0.00 43.28 3.53
5046 5988 5.207110 AGTCATCGTGAGGATTATTCCAG 57.793 43.478 6.44 0.00 45.30 3.86
5047 5989 4.651503 AGTCATCGTGAGGATTATTCCAGT 59.348 41.667 6.44 0.00 45.30 4.00
5048 5990 4.747108 GTCATCGTGAGGATTATTCCAGTG 59.253 45.833 6.44 0.00 45.30 3.66
5049 5991 4.649218 TCATCGTGAGGATTATTCCAGTGA 59.351 41.667 6.44 0.00 45.30 3.41
5050 5992 5.305386 TCATCGTGAGGATTATTCCAGTGAT 59.695 40.000 6.44 1.84 45.30 3.06
5051 5993 4.948847 TCGTGAGGATTATTCCAGTGATG 58.051 43.478 6.44 0.00 45.30 3.07
5052 5994 4.060900 CGTGAGGATTATTCCAGTGATGG 58.939 47.826 6.44 0.00 45.30 3.51
5053 5995 4.443457 CGTGAGGATTATTCCAGTGATGGT 60.443 45.833 6.44 0.00 45.30 3.55
5054 5996 4.818546 GTGAGGATTATTCCAGTGATGGTG 59.181 45.833 6.44 0.00 45.30 4.17
5055 5997 4.721274 TGAGGATTATTCCAGTGATGGTGA 59.279 41.667 6.44 0.00 45.30 4.02
5056 5998 5.370584 TGAGGATTATTCCAGTGATGGTGAT 59.629 40.000 6.44 0.00 45.30 3.06
5057 5999 6.558394 TGAGGATTATTCCAGTGATGGTGATA 59.442 38.462 6.44 0.00 45.30 2.15
5058 6000 7.013823 AGGATTATTCCAGTGATGGTGATAG 57.986 40.000 6.44 0.00 45.30 2.08
5059 6001 6.013032 AGGATTATTCCAGTGATGGTGATAGG 60.013 42.308 6.44 0.00 45.30 2.57
5060 6002 6.013379 GGATTATTCCAGTGATGGTGATAGGA 60.013 42.308 0.00 0.00 42.12 2.94
5061 6003 4.970860 ATTCCAGTGATGGTGATAGGAG 57.029 45.455 0.00 0.00 0.00 3.69
5062 6004 2.682594 TCCAGTGATGGTGATAGGAGG 58.317 52.381 0.00 0.00 0.00 4.30
5063 6005 2.247372 TCCAGTGATGGTGATAGGAGGA 59.753 50.000 0.00 0.00 0.00 3.71
5064 6006 2.632028 CCAGTGATGGTGATAGGAGGAG 59.368 54.545 0.00 0.00 0.00 3.69
5065 6007 2.632028 CAGTGATGGTGATAGGAGGAGG 59.368 54.545 0.00 0.00 0.00 4.30
5066 6008 2.248686 AGTGATGGTGATAGGAGGAGGT 59.751 50.000 0.00 0.00 0.00 3.85
5067 6009 2.630580 GTGATGGTGATAGGAGGAGGTC 59.369 54.545 0.00 0.00 0.00 3.85
5068 6010 1.889829 GATGGTGATAGGAGGAGGTCG 59.110 57.143 0.00 0.00 0.00 4.79
5069 6011 0.924090 TGGTGATAGGAGGAGGTCGA 59.076 55.000 0.00 0.00 0.00 4.20
5070 6012 1.133761 TGGTGATAGGAGGAGGTCGAG 60.134 57.143 0.00 0.00 0.00 4.04
5071 6013 1.133730 GGTGATAGGAGGAGGTCGAGT 60.134 57.143 0.00 0.00 0.00 4.18
5072 6014 2.223745 GTGATAGGAGGAGGTCGAGTC 58.776 57.143 0.00 0.00 0.00 3.36
5073 6015 1.844497 TGATAGGAGGAGGTCGAGTCA 59.156 52.381 0.00 0.00 0.00 3.41
5074 6016 2.223745 GATAGGAGGAGGTCGAGTCAC 58.776 57.143 0.00 0.00 0.00 3.67
5075 6017 0.255318 TAGGAGGAGGTCGAGTCACC 59.745 60.000 4.17 4.17 36.58 4.02
5076 6018 2.408241 GGAGGAGGTCGAGTCACCG 61.408 68.421 0.00 0.00 41.90 4.94
5077 6019 1.674980 GAGGAGGTCGAGTCACCGT 60.675 63.158 0.00 0.00 41.90 4.83
5078 6020 1.924320 GAGGAGGTCGAGTCACCGTG 61.924 65.000 0.00 0.00 41.90 4.94
5079 6021 1.970114 GGAGGTCGAGTCACCGTGA 60.970 63.158 0.00 0.00 41.90 4.35
5080 6022 1.502640 GAGGTCGAGTCACCGTGAG 59.497 63.158 0.08 0.00 41.90 3.51
5097 6039 3.851458 TGAGGATCATTCCACTGATGG 57.149 47.619 0.00 0.00 42.56 3.51
5098 6040 3.117745 TGAGGATCATTCCACTGATGGT 58.882 45.455 0.00 0.00 43.89 3.55
5099 6041 3.118149 TGAGGATCATTCCACTGATGGTG 60.118 47.826 0.00 0.00 43.89 4.17
5108 6050 1.866015 CACTGATGGTGGTAGGAGGA 58.134 55.000 0.00 0.00 41.90 3.71
5109 6051 1.759445 CACTGATGGTGGTAGGAGGAG 59.241 57.143 0.00 0.00 41.90 3.69
5110 6052 1.343478 ACTGATGGTGGTAGGAGGAGG 60.343 57.143 0.00 0.00 0.00 4.30
5111 6053 0.716591 TGATGGTGGTAGGAGGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
5112 6054 1.343075 TGATGGTGGTAGGAGGAGGTC 60.343 57.143 0.00 0.00 0.00 3.85
5113 6055 0.397254 ATGGTGGTAGGAGGAGGTCG 60.397 60.000 0.00 0.00 0.00 4.79
5114 6056 1.305623 GGTGGTAGGAGGAGGTCGA 59.694 63.158 0.00 0.00 0.00 4.20
5115 6057 0.752376 GGTGGTAGGAGGAGGTCGAG 60.752 65.000 0.00 0.00 0.00 4.04
5116 6058 0.034283 GTGGTAGGAGGAGGTCGAGT 60.034 60.000 0.00 0.00 0.00 4.18
5117 6059 0.255318 TGGTAGGAGGAGGTCGAGTC 59.745 60.000 0.00 0.00 0.00 3.36
5118 6060 0.255318 GGTAGGAGGAGGTCGAGTCA 59.745 60.000 0.00 0.00 0.00 3.41
5119 6061 1.133730 GGTAGGAGGAGGTCGAGTCAT 60.134 57.143 0.00 0.00 0.00 3.06
5120 6062 1.950909 GTAGGAGGAGGTCGAGTCATG 59.049 57.143 0.00 0.00 0.00 3.07
5121 6063 0.396417 AGGAGGAGGTCGAGTCATGG 60.396 60.000 0.00 0.00 0.00 3.66
5122 6064 0.684805 GGAGGAGGTCGAGTCATGGT 60.685 60.000 0.00 0.00 0.00 3.55
5123 6065 0.457851 GAGGAGGTCGAGTCATGGTG 59.542 60.000 0.00 0.00 0.00 4.17
5124 6066 0.039764 AGGAGGTCGAGTCATGGTGA 59.960 55.000 0.00 0.00 0.00 4.02
5125 6067 0.457851 GGAGGTCGAGTCATGGTGAG 59.542 60.000 0.00 0.00 0.00 3.51
5126 6068 0.457851 GAGGTCGAGTCATGGTGAGG 59.542 60.000 0.00 0.00 0.00 3.86
5127 6069 0.039764 AGGTCGAGTCATGGTGAGGA 59.960 55.000 0.00 0.00 0.00 3.71
5128 6070 1.115467 GGTCGAGTCATGGTGAGGAT 58.885 55.000 0.00 0.00 0.00 3.24
5129 6071 1.067821 GGTCGAGTCATGGTGAGGATC 59.932 57.143 0.00 0.00 0.00 3.36
5165 6197 0.261991 TAGGAGGAGGTCGAGCCATT 59.738 55.000 11.73 0.00 40.61 3.16
5673 6705 6.403878 TGGTAATTTTGGTACTAGTCTCAGC 58.596 40.000 0.00 0.00 0.00 4.26
5808 6840 1.055040 GATCAGGCCCTGCAGACTAT 58.945 55.000 17.39 0.00 0.00 2.12
5819 6851 4.706476 CCCTGCAGACTATGAAATGGAAAA 59.294 41.667 17.39 0.00 0.00 2.29
5841 7038 2.040412 GAGAAGTGTTCCCCTTCACCAT 59.960 50.000 0.00 0.00 40.62 3.55
5846 7043 1.106285 GTTCCCCTTCACCATGATGC 58.894 55.000 0.00 0.00 0.00 3.91
5873 7070 1.742880 TCGAGGAGTACACCGGTCG 60.743 63.158 2.59 12.73 34.73 4.79
6084 7281 0.040204 ATAGGGCTTTTGCTGCAGGT 59.960 50.000 17.12 0.00 46.54 4.00
6110 7307 0.468585 ACGGATAGGTATGTCCCGCA 60.469 55.000 0.00 0.00 43.56 5.69
6133 7330 1.227615 GACCGAACGAACCACCCAA 60.228 57.895 0.00 0.00 0.00 4.12
6135 7332 0.686224 ACCGAACGAACCACCCAATA 59.314 50.000 0.00 0.00 0.00 1.90
6144 7341 3.435671 CGAACCACCCAATAAGAGTTGAC 59.564 47.826 0.00 0.00 0.00 3.18
6212 7409 3.357079 CGTGTTGCCAGTCCCAGC 61.357 66.667 0.00 0.00 0.00 4.85
6226 7423 1.064463 TCCCAGCCAGCCTATGAAAAG 60.064 52.381 0.00 0.00 0.00 2.27
6316 7515 1.343465 CAGAGTGGTTGGACGGTAACT 59.657 52.381 0.00 0.00 0.00 2.24
6325 7524 1.150827 GGACGGTAACTTTCAACCCG 58.849 55.000 0.00 0.00 44.06 5.28
6392 7591 3.243877 CGGATCTTGCTACTTGTCGATTG 59.756 47.826 0.00 0.00 0.00 2.67
6440 7639 0.472044 TGGTTGCTGGAGTGTGCTTA 59.528 50.000 0.00 0.00 0.00 3.09
6497 7720 3.281727 AAGCAGAAGTGGTTCAGACAA 57.718 42.857 0.00 0.00 40.44 3.18
6500 7723 4.016444 AGCAGAAGTGGTTCAGACAAAAA 58.984 39.130 0.00 0.00 34.82 1.94
6507 7730 0.741915 GTTCAGACAAAAACGGGCCA 59.258 50.000 4.39 0.00 0.00 5.36
6520 7743 1.078918 GGGCCAAGCAAATGGAAGC 60.079 57.895 4.39 0.00 43.54 3.86
6524 7747 0.810648 CCAAGCAAATGGAAGCGCTA 59.189 50.000 12.05 0.00 43.54 4.26
6531 7754 6.187125 AGCAAATGGAAGCGCTATATAATG 57.813 37.500 12.05 8.08 35.48 1.90
6564 7788 1.795768 TCGCAGCTAAGTCTTTGGTG 58.204 50.000 18.18 18.18 0.00 4.17
6618 7845 6.007076 TGGTAATCTGCAGTTGTTCCAAATA 58.993 36.000 14.67 0.00 0.00 1.40
6627 7854 7.089538 TGCAGTTGTTCCAAATATGTTGTATG 58.910 34.615 0.00 0.00 0.00 2.39
6658 7885 4.216366 GAAGGTTTCTTCAGTTGTGCTC 57.784 45.455 1.70 0.00 46.45 4.26
6729 7979 3.040147 AGTGAATGGTCGATTCGTTGT 57.960 42.857 5.89 0.00 43.22 3.32
6789 8050 4.425577 AGTTTTGTCGATCATTTGAGGC 57.574 40.909 0.00 0.00 0.00 4.70
6830 8091 9.622004 TGTAGTTTTGTCTCGTAGAATTCTTAG 57.378 33.333 14.36 9.26 34.09 2.18
6831 8092 9.074443 GTAGTTTTGTCTCGTAGAATTCTTAGG 57.926 37.037 14.36 3.62 34.09 2.69
6832 8093 6.590677 AGTTTTGTCTCGTAGAATTCTTAGGC 59.409 38.462 14.36 10.96 34.09 3.93
6833 8094 4.288670 TGTCTCGTAGAATTCTTAGGCG 57.711 45.455 14.36 12.98 34.09 5.52
6834 8095 3.693085 TGTCTCGTAGAATTCTTAGGCGT 59.307 43.478 14.36 0.00 34.09 5.68
6835 8096 4.157289 TGTCTCGTAGAATTCTTAGGCGTT 59.843 41.667 14.36 0.00 34.09 4.84
6836 8097 4.499758 GTCTCGTAGAATTCTTAGGCGTTG 59.500 45.833 14.36 10.50 34.09 4.10
6837 8098 4.397103 TCTCGTAGAATTCTTAGGCGTTGA 59.603 41.667 14.36 12.18 34.09 3.18
6838 8099 4.669318 TCGTAGAATTCTTAGGCGTTGAG 58.331 43.478 14.36 0.00 0.00 3.02
6839 8100 3.797256 CGTAGAATTCTTAGGCGTTGAGG 59.203 47.826 14.36 0.00 0.00 3.86
6840 8101 3.268023 AGAATTCTTAGGCGTTGAGGG 57.732 47.619 0.88 0.00 0.00 4.30
6841 8102 1.671328 GAATTCTTAGGCGTTGAGGGC 59.329 52.381 0.00 0.00 0.00 5.19
6842 8103 0.618458 ATTCTTAGGCGTTGAGGGCA 59.382 50.000 0.19 0.00 34.40 5.36
6843 8104 0.618458 TTCTTAGGCGTTGAGGGCAT 59.382 50.000 0.19 0.00 34.40 4.40
6844 8105 0.107703 TCTTAGGCGTTGAGGGCATG 60.108 55.000 0.00 0.00 34.40 4.06
6845 8106 0.392998 CTTAGGCGTTGAGGGCATGT 60.393 55.000 0.00 0.00 34.40 3.21
6846 8107 0.906066 TTAGGCGTTGAGGGCATGTA 59.094 50.000 0.00 0.00 34.40 2.29
6847 8108 1.128200 TAGGCGTTGAGGGCATGTAT 58.872 50.000 0.00 0.00 34.40 2.29
6848 8109 0.464373 AGGCGTTGAGGGCATGTATG 60.464 55.000 0.00 0.00 34.40 2.39
6849 8110 0.748005 GGCGTTGAGGGCATGTATGT 60.748 55.000 0.00 0.00 0.00 2.29
6850 8111 1.474320 GGCGTTGAGGGCATGTATGTA 60.474 52.381 0.00 0.00 0.00 2.29
6851 8112 1.867233 GCGTTGAGGGCATGTATGTAG 59.133 52.381 0.00 0.00 0.00 2.74
6852 8113 2.741878 GCGTTGAGGGCATGTATGTAGT 60.742 50.000 0.00 0.00 0.00 2.73
6853 8114 3.531538 CGTTGAGGGCATGTATGTAGTT 58.468 45.455 0.00 0.00 0.00 2.24
6854 8115 3.938963 CGTTGAGGGCATGTATGTAGTTT 59.061 43.478 0.00 0.00 0.00 2.66
6855 8116 4.394920 CGTTGAGGGCATGTATGTAGTTTT 59.605 41.667 0.00 0.00 0.00 2.43
6856 8117 5.640732 GTTGAGGGCATGTATGTAGTTTTG 58.359 41.667 0.00 0.00 0.00 2.44
6857 8118 3.694072 TGAGGGCATGTATGTAGTTTTGC 59.306 43.478 0.00 0.00 0.00 3.68
6858 8119 3.023832 AGGGCATGTATGTAGTTTTGCC 58.976 45.455 3.18 3.18 46.92 4.52
6859 8120 3.023832 GGGCATGTATGTAGTTTTGCCT 58.976 45.455 11.14 0.00 46.84 4.75
6860 8121 3.066760 GGGCATGTATGTAGTTTTGCCTC 59.933 47.826 11.14 0.00 46.84 4.70
6861 8122 3.242739 GGCATGTATGTAGTTTTGCCTCG 60.243 47.826 4.56 0.00 44.81 4.63
6862 8123 3.374058 GCATGTATGTAGTTTTGCCTCGT 59.626 43.478 0.00 0.00 0.00 4.18
6863 8124 4.494199 GCATGTATGTAGTTTTGCCTCGTC 60.494 45.833 0.00 0.00 0.00 4.20
6864 8125 3.247442 TGTATGTAGTTTTGCCTCGTCG 58.753 45.455 0.00 0.00 0.00 5.12
6865 8126 2.736144 ATGTAGTTTTGCCTCGTCGA 57.264 45.000 0.00 0.00 0.00 4.20
6866 8127 2.512485 TGTAGTTTTGCCTCGTCGAA 57.488 45.000 0.00 0.00 0.00 3.71
6867 8128 3.034721 TGTAGTTTTGCCTCGTCGAAT 57.965 42.857 0.00 0.00 0.00 3.34
6868 8129 3.395639 TGTAGTTTTGCCTCGTCGAATT 58.604 40.909 0.00 0.00 0.00 2.17
6869 8130 3.430895 TGTAGTTTTGCCTCGTCGAATTC 59.569 43.478 0.00 0.00 0.00 2.17
6870 8131 2.767505 AGTTTTGCCTCGTCGAATTCT 58.232 42.857 3.52 0.00 0.00 2.40
6871 8132 3.139077 AGTTTTGCCTCGTCGAATTCTT 58.861 40.909 3.52 0.00 0.00 2.52
6872 8133 4.312443 AGTTTTGCCTCGTCGAATTCTTA 58.688 39.130 3.52 0.00 0.00 2.10
6873 8134 4.935808 AGTTTTGCCTCGTCGAATTCTTAT 59.064 37.500 3.52 0.00 0.00 1.73
6874 8135 6.103997 AGTTTTGCCTCGTCGAATTCTTATA 58.896 36.000 3.52 0.00 0.00 0.98
6875 8136 6.761714 AGTTTTGCCTCGTCGAATTCTTATAT 59.238 34.615 3.52 0.00 0.00 0.86
6876 8137 6.525121 TTTGCCTCGTCGAATTCTTATATG 57.475 37.500 3.52 0.00 0.00 1.78
6877 8138 5.447624 TGCCTCGTCGAATTCTTATATGA 57.552 39.130 3.52 0.00 0.00 2.15
6878 8139 5.838529 TGCCTCGTCGAATTCTTATATGAA 58.161 37.500 3.52 3.74 0.00 2.57
6879 8140 5.690409 TGCCTCGTCGAATTCTTATATGAAC 59.310 40.000 3.52 0.00 0.00 3.18
6880 8141 5.164177 GCCTCGTCGAATTCTTATATGAACG 60.164 44.000 3.52 4.60 0.00 3.95
6881 8142 5.164177 CCTCGTCGAATTCTTATATGAACGC 60.164 44.000 3.52 0.00 0.00 4.84
6882 8143 4.678287 TCGTCGAATTCTTATATGAACGCC 59.322 41.667 3.52 0.00 0.00 5.68
6883 8144 4.143389 CGTCGAATTCTTATATGAACGCCC 60.143 45.833 3.52 0.00 0.00 6.13
6884 8145 4.989168 GTCGAATTCTTATATGAACGCCCT 59.011 41.667 3.52 0.00 0.00 5.19
6885 8146 4.988540 TCGAATTCTTATATGAACGCCCTG 59.011 41.667 3.52 0.00 0.00 4.45
6886 8147 4.750098 CGAATTCTTATATGAACGCCCTGT 59.250 41.667 3.52 0.00 0.00 4.00
6887 8148 5.236478 CGAATTCTTATATGAACGCCCTGTT 59.764 40.000 3.52 0.00 45.61 3.16
6893 8154 4.296265 GAACGCCCTGTTCGGAAT 57.704 55.556 0.00 0.00 46.85 3.01
6894 8155 2.087344 GAACGCCCTGTTCGGAATC 58.913 57.895 0.00 0.00 46.85 2.52
6895 8156 1.693083 GAACGCCCTGTTCGGAATCG 61.693 60.000 0.00 0.00 46.85 3.34
6896 8157 3.564027 CGCCCTGTTCGGAATCGC 61.564 66.667 0.00 0.00 36.13 4.58
6897 8158 2.125106 GCCCTGTTCGGAATCGCT 60.125 61.111 0.00 0.00 36.13 4.93
6898 8159 2.174319 GCCCTGTTCGGAATCGCTC 61.174 63.158 0.00 0.00 36.13 5.03
6899 8160 1.521681 CCCTGTTCGGAATCGCTCC 60.522 63.158 0.00 0.00 41.40 4.70
6907 8168 4.873129 GAATCGCTCCGCTCCGCA 62.873 66.667 0.00 0.00 0.00 5.69
6908 8169 4.451150 AATCGCTCCGCTCCGCAA 62.451 61.111 0.00 0.00 0.00 4.85
6913 8174 3.114616 CTCCGCTCCGCAACACAG 61.115 66.667 0.00 0.00 0.00 3.66
6916 8177 3.782244 CGCTCCGCAACACAGCTC 61.782 66.667 0.00 0.00 0.00 4.09
6917 8178 3.426568 GCTCCGCAACACAGCTCC 61.427 66.667 0.00 0.00 0.00 4.70
6918 8179 2.743928 CTCCGCAACACAGCTCCC 60.744 66.667 0.00 0.00 0.00 4.30
6919 8180 4.680237 TCCGCAACACAGCTCCCG 62.680 66.667 0.00 0.00 0.00 5.14
6921 8182 4.680237 CGCAACACAGCTCCCGGA 62.680 66.667 0.73 0.00 0.00 5.14
6922 8183 2.743928 GCAACACAGCTCCCGGAG 60.744 66.667 10.41 10.41 0.00 4.63
6936 8197 3.075005 GGAGCGGGTGGAGCTGTA 61.075 66.667 0.00 0.00 46.13 2.74
6937 8198 2.496817 GAGCGGGTGGAGCTGTAG 59.503 66.667 0.00 0.00 46.13 2.74
6938 8199 2.283966 AGCGGGTGGAGCTGTAGT 60.284 61.111 0.00 0.00 44.22 2.73
6939 8200 1.889530 GAGCGGGTGGAGCTGTAGTT 61.890 60.000 0.00 0.00 46.13 2.24
6940 8201 1.741770 GCGGGTGGAGCTGTAGTTG 60.742 63.158 0.00 0.00 0.00 3.16
6941 8202 1.079127 CGGGTGGAGCTGTAGTTGG 60.079 63.158 0.00 0.00 0.00 3.77
6942 8203 1.541310 CGGGTGGAGCTGTAGTTGGA 61.541 60.000 0.00 0.00 0.00 3.53
6943 8204 0.690762 GGGTGGAGCTGTAGTTGGAA 59.309 55.000 0.00 0.00 0.00 3.53
6944 8205 1.073284 GGGTGGAGCTGTAGTTGGAAA 59.927 52.381 0.00 0.00 0.00 3.13
6945 8206 2.290960 GGGTGGAGCTGTAGTTGGAAAT 60.291 50.000 0.00 0.00 0.00 2.17
6946 8207 3.010420 GGTGGAGCTGTAGTTGGAAATC 58.990 50.000 0.00 0.00 0.00 2.17
6947 8208 3.559171 GGTGGAGCTGTAGTTGGAAATCA 60.559 47.826 0.00 0.00 0.00 2.57
6948 8209 3.686726 GTGGAGCTGTAGTTGGAAATCAG 59.313 47.826 0.00 0.00 0.00 2.90
6949 8210 3.274288 GGAGCTGTAGTTGGAAATCAGG 58.726 50.000 0.00 0.00 0.00 3.86
6950 8211 3.274288 GAGCTGTAGTTGGAAATCAGGG 58.726 50.000 0.00 0.00 0.00 4.45
6951 8212 2.912956 AGCTGTAGTTGGAAATCAGGGA 59.087 45.455 0.00 0.00 0.00 4.20
6952 8213 3.054802 AGCTGTAGTTGGAAATCAGGGAG 60.055 47.826 0.00 0.00 0.00 4.30
6953 8214 3.274288 CTGTAGTTGGAAATCAGGGAGC 58.726 50.000 0.00 0.00 0.00 4.70
6954 8215 2.912956 TGTAGTTGGAAATCAGGGAGCT 59.087 45.455 0.00 0.00 0.00 4.09
6955 8216 2.503895 AGTTGGAAATCAGGGAGCTG 57.496 50.000 0.00 0.00 0.00 4.24
6956 8217 0.813821 GTTGGAAATCAGGGAGCTGC 59.186 55.000 0.00 0.00 0.00 5.25
6957 8218 0.405198 TTGGAAATCAGGGAGCTGCA 59.595 50.000 7.79 0.00 0.00 4.41
6958 8219 0.322816 TGGAAATCAGGGAGCTGCAC 60.323 55.000 7.79 0.00 0.00 4.57
6959 8220 0.034670 GGAAATCAGGGAGCTGCACT 60.035 55.000 7.79 0.00 0.00 4.40
6960 8221 1.615384 GGAAATCAGGGAGCTGCACTT 60.615 52.381 7.79 0.00 0.00 3.16
6961 8222 2.165998 GAAATCAGGGAGCTGCACTTT 58.834 47.619 7.79 0.42 0.00 2.66
6962 8223 1.831580 AATCAGGGAGCTGCACTTTC 58.168 50.000 7.79 0.00 0.00 2.62
6963 8224 0.034670 ATCAGGGAGCTGCACTTTCC 60.035 55.000 7.79 0.00 0.00 3.13
6964 8225 1.130054 TCAGGGAGCTGCACTTTCCT 61.130 55.000 7.79 0.00 34.01 3.36
6965 8226 0.676151 CAGGGAGCTGCACTTTCCTC 60.676 60.000 7.79 0.00 32.13 3.71
6966 8227 1.743252 GGGAGCTGCACTTTCCTCG 60.743 63.158 7.79 0.00 0.00 4.63
6967 8228 2.394563 GGAGCTGCACTTTCCTCGC 61.395 63.158 0.00 0.00 0.00 5.03
6968 8229 1.375268 GAGCTGCACTTTCCTCGCT 60.375 57.895 1.02 0.00 0.00 4.93
6969 8230 1.357991 GAGCTGCACTTTCCTCGCTC 61.358 60.000 1.02 4.79 37.35 5.03
6970 8231 2.394563 GCTGCACTTTCCTCGCTCC 61.395 63.158 0.00 0.00 0.00 4.70
6971 8232 1.743252 CTGCACTTTCCTCGCTCCC 60.743 63.158 0.00 0.00 0.00 4.30
6972 8233 2.815647 GCACTTTCCTCGCTCCCG 60.816 66.667 0.00 0.00 0.00 5.14
6973 8234 2.970639 CACTTTCCTCGCTCCCGA 59.029 61.111 0.00 0.00 42.01 5.14
6981 8242 3.526430 TCGCTCCCGAGATTCCTG 58.474 61.111 0.00 0.00 38.82 3.86
6982 8243 1.379977 TCGCTCCCGAGATTCCTGT 60.380 57.895 0.00 0.00 38.82 4.00
6983 8244 0.106868 TCGCTCCCGAGATTCCTGTA 60.107 55.000 0.00 0.00 38.82 2.74
6984 8245 0.030908 CGCTCCCGAGATTCCTGTAC 59.969 60.000 0.00 0.00 36.29 2.90
6985 8246 1.404843 GCTCCCGAGATTCCTGTACT 58.595 55.000 0.00 0.00 0.00 2.73
6986 8247 1.067821 GCTCCCGAGATTCCTGTACTG 59.932 57.143 0.00 0.00 0.00 2.74
6987 8248 1.683917 CTCCCGAGATTCCTGTACTGG 59.316 57.143 12.42 12.42 0.00 4.00
6988 8249 0.753262 CCCGAGATTCCTGTACTGGG 59.247 60.000 17.82 8.78 0.00 4.45
6989 8250 1.486211 CCGAGATTCCTGTACTGGGT 58.514 55.000 17.82 7.94 0.00 4.51
6990 8251 1.137086 CCGAGATTCCTGTACTGGGTG 59.863 57.143 17.82 3.25 0.00 4.61
6991 8252 1.137086 CGAGATTCCTGTACTGGGTGG 59.863 57.143 17.82 1.70 0.00 4.61
6992 8253 1.486726 GAGATTCCTGTACTGGGTGGG 59.513 57.143 17.82 0.09 0.00 4.61
6993 8254 1.203440 AGATTCCTGTACTGGGTGGGT 60.203 52.381 17.82 1.37 0.00 4.51
6994 8255 1.633945 GATTCCTGTACTGGGTGGGTT 59.366 52.381 17.82 0.00 0.00 4.11
6995 8256 0.768622 TTCCTGTACTGGGTGGGTTG 59.231 55.000 17.82 0.00 0.00 3.77
6996 8257 0.104882 TCCTGTACTGGGTGGGTTGA 60.105 55.000 17.82 0.00 0.00 3.18
6997 8258 0.036306 CCTGTACTGGGTGGGTTGAC 59.964 60.000 10.86 0.00 0.00 3.18
6998 8259 0.320421 CTGTACTGGGTGGGTTGACG 60.320 60.000 0.00 0.00 0.00 4.35
6999 8260 0.759812 TGTACTGGGTGGGTTGACGA 60.760 55.000 0.00 0.00 0.00 4.20
7000 8261 0.393820 GTACTGGGTGGGTTGACGAA 59.606 55.000 0.00 0.00 0.00 3.85
7001 8262 0.393820 TACTGGGTGGGTTGACGAAC 59.606 55.000 0.00 0.00 0.00 3.95
7002 8263 1.147376 CTGGGTGGGTTGACGAACA 59.853 57.895 0.00 0.00 33.27 3.18
7003 8264 0.884704 CTGGGTGGGTTGACGAACAG 60.885 60.000 0.00 0.00 33.27 3.16
7004 8265 1.599797 GGGTGGGTTGACGAACAGG 60.600 63.158 0.00 0.00 33.27 4.00
7005 8266 1.599797 GGTGGGTTGACGAACAGGG 60.600 63.158 0.00 0.00 33.27 4.45
7006 8267 2.112297 TGGGTTGACGAACAGGGC 59.888 61.111 0.00 0.00 33.27 5.19
7007 8268 2.671963 GGGTTGACGAACAGGGCC 60.672 66.667 0.00 0.00 33.27 5.80
7035 8296 5.403897 TTGAGCTTTGTGTCGAACTAAAG 57.596 39.130 10.50 10.50 33.57 1.85
7046 8307 4.393990 TGTCGAACTAAAGATCTCACGCTA 59.606 41.667 0.00 0.00 0.00 4.26
7065 8326 4.595116 GCTACTTTGTTAGAGCGATCGTA 58.405 43.478 17.81 0.00 0.00 3.43
7071 8332 3.692576 TGTTAGAGCGATCGTAGCTTTC 58.307 45.455 17.81 5.53 46.13 2.62
7091 8352 4.194678 TCTACCGGAATACTCTTCCCAT 57.805 45.455 9.46 0.00 35.17 4.00
7101 8362 7.201884 CGGAATACTCTTCCCATTAGTACTTGA 60.202 40.741 0.00 0.00 35.17 3.02
7146 8407 8.609478 ATTTTGTACAAATAATCTTTACGCCG 57.391 30.769 21.17 0.00 0.00 6.46
7147 8408 5.146482 TGTACAAATAATCTTTACGCCGC 57.854 39.130 0.00 0.00 0.00 6.53
7148 8409 3.313274 ACAAATAATCTTTACGCCGCG 57.687 42.857 12.14 12.14 0.00 6.46
7149 8410 2.674357 ACAAATAATCTTTACGCCGCGT 59.326 40.909 23.72 23.72 44.35 6.01
7150 8411 3.125658 ACAAATAATCTTTACGCCGCGTT 59.874 39.130 25.47 7.29 41.54 4.84
7151 8412 4.092816 CAAATAATCTTTACGCCGCGTTT 58.907 39.130 25.47 14.09 41.54 3.60
7152 8413 2.791417 TAATCTTTACGCCGCGTTTG 57.209 45.000 25.47 14.09 41.54 2.93
7153 8414 0.167251 AATCTTTACGCCGCGTTTGG 59.833 50.000 25.47 13.68 41.54 3.28
7161 8422 4.838959 CCGCGTTTGGCTACAAAG 57.161 55.556 4.92 0.00 46.47 2.77
7162 8423 1.946267 CCGCGTTTGGCTACAAAGT 59.054 52.632 4.92 0.00 46.47 2.66
7163 8424 1.149987 CCGCGTTTGGCTACAAAGTA 58.850 50.000 4.92 0.00 46.47 2.24
7164 8425 1.136169 CCGCGTTTGGCTACAAAGTAC 60.136 52.381 4.92 0.00 46.47 2.73
7165 8426 1.527736 CGCGTTTGGCTACAAAGTACA 59.472 47.619 0.00 0.00 46.47 2.90
7166 8427 2.158841 CGCGTTTGGCTACAAAGTACAT 59.841 45.455 0.00 0.00 46.47 2.29
7167 8428 3.368539 CGCGTTTGGCTACAAAGTACATA 59.631 43.478 0.00 0.00 46.47 2.29
7168 8429 4.143073 CGCGTTTGGCTACAAAGTACATAA 60.143 41.667 0.00 0.00 46.47 1.90
7169 8430 5.615106 CGCGTTTGGCTACAAAGTACATAAA 60.615 40.000 0.00 0.00 46.47 1.40
7170 8431 5.566395 GCGTTTGGCTACAAAGTACATAAAC 59.434 40.000 0.00 0.00 46.47 2.01
7171 8432 6.081693 CGTTTGGCTACAAAGTACATAAACC 58.918 40.000 0.00 0.00 46.47 3.27
7172 8433 6.384224 GTTTGGCTACAAAGTACATAAACCC 58.616 40.000 0.00 0.00 46.47 4.11
7173 8434 5.508280 TGGCTACAAAGTACATAAACCCT 57.492 39.130 0.00 0.00 0.00 4.34
7174 8435 5.250200 TGGCTACAAAGTACATAAACCCTG 58.750 41.667 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.083324 GCAAAAGGAACGATGATCTTGACA 60.083 41.667 0.00 0.00 0.00 3.58
63 64 3.884037 AGGTTCCAACTTCCAACAGAT 57.116 42.857 0.00 0.00 0.00 2.90
123 124 5.941948 AAACAAGTACAGTACTGCAATCC 57.058 39.130 22.90 6.29 39.39 3.01
129 130 7.375834 TCACATCCTAAACAAGTACAGTACTG 58.624 38.462 21.44 21.44 39.39 2.74
222 239 6.211384 CCAAGTGAAAGGGAAACTAATCCATT 59.789 38.462 0.00 0.00 44.86 3.16
285 304 4.922471 TGTAAACAAACCCTACAAAGGC 57.078 40.909 0.00 0.00 42.14 4.35
294 313 4.857509 TGTAAGCCATGTAAACAAACCC 57.142 40.909 0.00 0.00 0.00 4.11
313 332 1.153168 GTGCTCCATGCCCGTATGT 60.153 57.895 0.00 0.00 42.00 2.29
314 333 0.392706 TAGTGCTCCATGCCCGTATG 59.607 55.000 0.00 0.00 42.00 2.39
358 377 1.072331 GTCAACCAGAGCAAAGGGAGA 59.928 52.381 0.00 0.00 0.00 3.71
402 421 5.001232 TCAAAGGTTATTGTAGCTTCGCTT 58.999 37.500 0.00 0.00 40.44 4.68
407 426 7.775053 TTGGATTCAAAGGTTATTGTAGCTT 57.225 32.000 0.00 0.00 37.45 3.74
416 435 6.916360 AAAGCAGATTGGATTCAAAGGTTA 57.084 33.333 0.00 0.00 36.36 2.85
447 466 9.855021 AACAATGTAACTCCTTGCAATAATAAC 57.145 29.630 0.00 0.00 0.00 1.89
568 614 7.829211 TGGAGGTATTCTCAATAAACCTTTCAG 59.171 37.037 0.00 0.00 44.19 3.02
646 692 9.941664 CAGCAAGACTTCACAATATTTTATAGG 57.058 33.333 0.00 0.00 0.00 2.57
649 695 7.972277 CAGCAGCAAGACTTCACAATATTTTAT 59.028 33.333 0.00 0.00 0.00 1.40
769 815 5.184711 TCATCATCACCATCATCGTCAAAA 58.815 37.500 0.00 0.00 0.00 2.44
892 938 4.933400 CCATCATCGTTGCTATCATCATCA 59.067 41.667 0.00 0.00 0.00 3.07
1158 1217 1.691976 TGTCTGAAACATGGACGGAGT 59.308 47.619 0.00 0.00 36.53 3.85
1159 1218 2.455674 TGTCTGAAACATGGACGGAG 57.544 50.000 0.00 0.00 31.20 4.63
1210 1269 8.463930 AGGTTCTACATTCACATTCTTTCAAA 57.536 30.769 0.00 0.00 0.00 2.69
1620 1679 6.697395 AGCCAAATAAAACAATGTTACTCCC 58.303 36.000 0.00 0.00 0.00 4.30
1621 1680 8.520351 ACTAGCCAAATAAAACAATGTTACTCC 58.480 33.333 0.00 0.00 0.00 3.85
1622 1681 9.908152 AACTAGCCAAATAAAACAATGTTACTC 57.092 29.630 0.00 0.00 0.00 2.59
1623 1682 9.908152 GAACTAGCCAAATAAAACAATGTTACT 57.092 29.630 0.00 0.00 0.00 2.24
1624 1683 9.685828 TGAACTAGCCAAATAAAACAATGTTAC 57.314 29.630 0.00 0.00 0.00 2.50
1732 1826 4.339748 TGAATCTGTAGCTCACTCACTCT 58.660 43.478 0.00 0.00 0.00 3.24
2045 2140 3.812053 CCAAAGATACCATAGCACAGAGC 59.188 47.826 0.00 0.00 46.19 4.09
2076 2171 3.749088 CAGTAGTAACCGGCATGAAACAA 59.251 43.478 0.00 0.00 0.00 2.83
2109 2204 2.375174 ACATCTGGGAAGCTGGTTACAA 59.625 45.455 3.97 0.00 0.00 2.41
2229 2325 1.069775 TCTTAACCTCCCCCAACCAC 58.930 55.000 0.00 0.00 0.00 4.16
2289 2385 6.202954 CACGTTGAATTCCAGTAAGAAGACTT 59.797 38.462 2.27 0.00 39.81 3.01
2290 2386 5.696724 CACGTTGAATTCCAGTAAGAAGACT 59.303 40.000 2.27 0.00 0.00 3.24
2312 2408 2.482864 CAAATCCCCAAAACACAGCAC 58.517 47.619 0.00 0.00 0.00 4.40
2367 2463 6.409704 TGGATTCTCTGTGAAAATACTGGAG 58.590 40.000 0.00 0.00 38.29 3.86
2382 3103 2.043526 ACTGGCCCAAAATGGATTCTCT 59.956 45.455 0.00 0.00 40.96 3.10
2395 3116 3.963129 CCAGAAGTTTATAACTGGCCCA 58.037 45.455 0.00 0.00 41.91 5.36
2624 3364 9.941325 ATCAATTTCCTGTAAATATGCAAAACA 57.059 25.926 0.00 0.00 36.76 2.83
2725 3465 9.695155 ATATAACAAGTTACCTTAGCATTTGGT 57.305 29.630 0.00 0.00 37.83 3.67
2796 3536 1.804748 GAACCGCAGAACTACAAAGGG 59.195 52.381 0.00 0.00 0.00 3.95
2833 3573 5.104193 AGCATACTCATTGGAGGAAGTGAAT 60.104 40.000 0.00 0.00 45.81 2.57
2865 3605 9.290988 TGAAAGGTGCTACATAAACAAGAAATA 57.709 29.630 0.00 0.00 0.00 1.40
2871 3612 5.242615 TGCATGAAAGGTGCTACATAAACAA 59.757 36.000 0.00 0.00 42.92 2.83
2872 3613 4.764308 TGCATGAAAGGTGCTACATAAACA 59.236 37.500 0.00 0.00 42.92 2.83
2922 3663 5.047306 TGTCACTTAGTAAGACACAGGATGG 60.047 44.000 16.89 0.00 43.62 3.51
3155 3902 6.716934 TTTGTAGCATTGGAACACCTAAAA 57.283 33.333 0.00 0.00 39.29 1.52
3253 4000 1.556911 GCAATCCTCCTCTCCAACTCA 59.443 52.381 0.00 0.00 0.00 3.41
3256 4003 2.016096 GCAGCAATCCTCCTCTCCAAC 61.016 57.143 0.00 0.00 0.00 3.77
3417 4164 7.607250 AGCTACAAGCAACTATATCTGGATAC 58.393 38.462 1.22 0.00 45.56 2.24
3437 4184 6.037098 AGAACGAGACAATCACATAAGCTAC 58.963 40.000 0.00 0.00 0.00 3.58
3570 4317 5.987347 TGGGAAACAAACGAGTAAGAACTAG 59.013 40.000 0.00 0.00 35.56 2.57
3812 4559 7.654022 TCATTTTCCTTTTACCAGTCACTTT 57.346 32.000 0.00 0.00 0.00 2.66
4014 4911 3.181445 ACATACCTTGTTTGACAGCTCCA 60.181 43.478 0.00 0.00 33.74 3.86
4083 4980 7.341805 TCTCCCTTTTGGAATCTTATCTTCTG 58.658 38.462 0.00 0.00 44.57 3.02
4084 4981 7.366371 CCTCTCCCTTTTGGAATCTTATCTTCT 60.366 40.741 0.00 0.00 44.57 2.85
4117 5014 3.323691 TCAAACGGATGGTCTCTTTCTCA 59.676 43.478 0.00 0.00 0.00 3.27
4138 5035 4.103357 GCTCATCATTGTGTGCTTGATTC 58.897 43.478 0.00 0.00 36.11 2.52
4168 5065 1.285078 GCCTGTTCCTCCCCAATAAGT 59.715 52.381 0.00 0.00 0.00 2.24
4176 5073 0.251634 CTCTTCAGCCTGTTCCTCCC 59.748 60.000 0.00 0.00 0.00 4.30
4384 5281 6.698008 TTGTTATTATCATTGCAGTGAGGG 57.302 37.500 17.42 0.00 0.00 4.30
4416 5313 8.450578 TGACTTGTCACTTGAAGTATCAATTT 57.549 30.769 12.30 5.69 44.29 1.82
4480 5377 5.055265 TCCTTTCCAAGTCCAACATGTTA 57.945 39.130 11.53 0.00 0.00 2.41
4613 5510 5.139435 TCATCATTACACCGAGGATGATC 57.861 43.478 0.00 0.00 39.37 2.92
4717 5614 5.138276 GACCCACCCCTATAAGAATTTTCC 58.862 45.833 0.00 0.00 0.00 3.13
4777 5674 0.462759 GCCCTTCCGGAGAATGTCTG 60.463 60.000 3.34 0.00 0.00 3.51
4802 5699 2.838386 TGACTGTTACGATACTCCGC 57.162 50.000 0.00 0.00 0.00 5.54
4902 5799 2.354704 CCACCAGTATCAACATCACGGT 60.355 50.000 0.00 0.00 0.00 4.83
4941 5838 5.484644 CCACCATCTCTAGAATGATCCTCAT 59.515 44.000 13.34 0.00 39.09 2.90
4957 5854 1.019650 ACCTCCTCCTACCACCATCT 58.980 55.000 0.00 0.00 0.00 2.90
4999 5941 1.759445 CTCCTCCTACCACCATCAGTG 59.241 57.143 0.00 0.00 46.83 3.66
5000 5942 1.343478 CCTCCTCCTACCACCATCAGT 60.343 57.143 0.00 0.00 0.00 3.41
5001 5943 1.343478 ACCTCCTCCTACCACCATCAG 60.343 57.143 0.00 0.00 0.00 2.90
5002 5944 0.716591 ACCTCCTCCTACCACCATCA 59.283 55.000 0.00 0.00 0.00 3.07
5003 5945 1.415200 GACCTCCTCCTACCACCATC 58.585 60.000 0.00 0.00 0.00 3.51
5004 5946 0.397254 CGACCTCCTCCTACCACCAT 60.397 60.000 0.00 0.00 0.00 3.55
5005 5947 1.000019 CGACCTCCTCCTACCACCA 60.000 63.158 0.00 0.00 0.00 4.17
5006 5948 0.752376 CTCGACCTCCTCCTACCACC 60.752 65.000 0.00 0.00 0.00 4.61
5007 5949 0.034283 ACTCGACCTCCTCCTACCAC 60.034 60.000 0.00 0.00 0.00 4.16
5008 5950 0.255318 GACTCGACCTCCTCCTACCA 59.745 60.000 0.00 0.00 0.00 3.25
5009 5951 0.255318 TGACTCGACCTCCTCCTACC 59.745 60.000 0.00 0.00 0.00 3.18
5010 5952 2.223745 GATGACTCGACCTCCTCCTAC 58.776 57.143 0.00 0.00 0.00 3.18
5011 5953 2.642154 GATGACTCGACCTCCTCCTA 57.358 55.000 0.00 0.00 0.00 2.94
5012 5954 3.505835 GATGACTCGACCTCCTCCT 57.494 57.895 0.00 0.00 0.00 3.69
5019 5961 8.918290 GGAATAATCCTCACGATGACTCGACC 62.918 50.000 1.54 0.00 44.03 4.79
5020 5962 6.069664 GGAATAATCCTCACGATGACTCGAC 61.070 48.000 1.54 0.00 44.03 4.20
5021 5963 4.023107 GGAATAATCCTCACGATGACTCGA 60.023 45.833 1.54 0.00 44.03 4.04
5022 5964 4.230657 GGAATAATCCTCACGATGACTCG 58.769 47.826 0.00 0.00 45.41 4.18
5023 5965 5.201713 TGGAATAATCCTCACGATGACTC 57.798 43.478 0.00 0.00 46.70 3.36
5024 5966 4.651503 ACTGGAATAATCCTCACGATGACT 59.348 41.667 0.00 0.00 46.70 3.41
5025 5967 4.747108 CACTGGAATAATCCTCACGATGAC 59.253 45.833 0.00 0.00 46.70 3.06
5026 5968 4.649218 TCACTGGAATAATCCTCACGATGA 59.351 41.667 0.00 0.00 46.70 2.92
5027 5969 4.948847 TCACTGGAATAATCCTCACGATG 58.051 43.478 0.00 0.00 46.70 3.84
5028 5970 5.512060 CCATCACTGGAATAATCCTCACGAT 60.512 44.000 0.00 0.00 46.37 3.73
5029 5971 4.202253 CCATCACTGGAATAATCCTCACGA 60.202 45.833 0.00 0.00 46.37 4.35
5030 5972 4.060900 CCATCACTGGAATAATCCTCACG 58.939 47.826 0.00 0.00 46.37 4.35
5031 5973 4.818546 CACCATCACTGGAATAATCCTCAC 59.181 45.833 0.00 0.00 46.37 3.51
5032 5974 4.721274 TCACCATCACTGGAATAATCCTCA 59.279 41.667 0.00 0.00 46.37 3.86
5033 5975 5.296151 TCACCATCACTGGAATAATCCTC 57.704 43.478 0.00 0.00 46.37 3.71
5034 5976 5.919348 ATCACCATCACTGGAATAATCCT 57.081 39.130 0.00 0.00 46.37 3.24
5035 5977 6.013379 TCCTATCACCATCACTGGAATAATCC 60.013 42.308 0.00 0.00 46.37 3.01
5036 5978 7.009179 TCCTATCACCATCACTGGAATAATC 57.991 40.000 0.00 0.00 46.37 1.75
5037 5979 6.013032 CCTCCTATCACCATCACTGGAATAAT 60.013 42.308 0.00 0.00 46.37 1.28
5038 5980 5.307976 CCTCCTATCACCATCACTGGAATAA 59.692 44.000 0.00 0.00 46.37 1.40
5039 5981 4.840680 CCTCCTATCACCATCACTGGAATA 59.159 45.833 0.00 0.00 46.37 1.75
5040 5982 3.649981 CCTCCTATCACCATCACTGGAAT 59.350 47.826 0.00 0.00 46.37 3.01
5041 5983 3.041211 CCTCCTATCACCATCACTGGAA 58.959 50.000 0.00 0.00 46.37 3.53
5042 5984 2.247372 TCCTCCTATCACCATCACTGGA 59.753 50.000 0.00 0.00 46.37 3.86
5044 5986 2.632028 CCTCCTCCTATCACCATCACTG 59.368 54.545 0.00 0.00 0.00 3.66
5045 5987 2.248686 ACCTCCTCCTATCACCATCACT 59.751 50.000 0.00 0.00 0.00 3.41
5046 5988 2.630580 GACCTCCTCCTATCACCATCAC 59.369 54.545 0.00 0.00 0.00 3.06
5047 5989 2.753168 CGACCTCCTCCTATCACCATCA 60.753 54.545 0.00 0.00 0.00 3.07
5048 5990 1.889829 CGACCTCCTCCTATCACCATC 59.110 57.143 0.00 0.00 0.00 3.51
5049 5991 1.499438 TCGACCTCCTCCTATCACCAT 59.501 52.381 0.00 0.00 0.00 3.55
5050 5992 0.924090 TCGACCTCCTCCTATCACCA 59.076 55.000 0.00 0.00 0.00 4.17
5051 5993 1.133730 ACTCGACCTCCTCCTATCACC 60.134 57.143 0.00 0.00 0.00 4.02
5052 5994 2.223745 GACTCGACCTCCTCCTATCAC 58.776 57.143 0.00 0.00 0.00 3.06
5053 5995 1.844497 TGACTCGACCTCCTCCTATCA 59.156 52.381 0.00 0.00 0.00 2.15
5054 5996 2.223745 GTGACTCGACCTCCTCCTATC 58.776 57.143 0.00 0.00 0.00 2.08
5055 5997 1.133730 GGTGACTCGACCTCCTCCTAT 60.134 57.143 0.00 0.00 32.69 2.57
5056 5998 0.255318 GGTGACTCGACCTCCTCCTA 59.745 60.000 0.00 0.00 32.69 2.94
5057 5999 1.000646 GGTGACTCGACCTCCTCCT 60.001 63.158 0.00 0.00 32.69 3.69
5058 6000 2.408241 CGGTGACTCGACCTCCTCC 61.408 68.421 0.00 0.00 33.35 4.30
5059 6001 1.674980 ACGGTGACTCGACCTCCTC 60.675 63.158 0.72 0.00 33.35 3.71
5060 6002 1.972223 CACGGTGACTCGACCTCCT 60.972 63.158 0.74 0.00 33.35 3.69
5061 6003 1.924320 CTCACGGTGACTCGACCTCC 61.924 65.000 6.76 0.00 33.35 4.30
5062 6004 1.502640 CTCACGGTGACTCGACCTC 59.497 63.158 6.76 0.00 33.35 3.85
5063 6005 1.972223 CCTCACGGTGACTCGACCT 60.972 63.158 6.76 0.00 33.35 3.85
5064 6006 1.313812 ATCCTCACGGTGACTCGACC 61.314 60.000 6.76 0.00 0.00 4.79
5065 6007 0.099082 GATCCTCACGGTGACTCGAC 59.901 60.000 6.76 0.00 0.00 4.20
5066 6008 0.322187 TGATCCTCACGGTGACTCGA 60.322 55.000 6.76 3.66 0.00 4.04
5067 6009 0.741326 ATGATCCTCACGGTGACTCG 59.259 55.000 6.76 0.00 0.00 4.18
5068 6010 2.482142 GGAATGATCCTCACGGTGACTC 60.482 54.545 6.76 5.34 42.93 3.36
5069 6011 1.482593 GGAATGATCCTCACGGTGACT 59.517 52.381 6.76 0.00 42.93 3.41
5070 6012 1.207089 TGGAATGATCCTCACGGTGAC 59.793 52.381 6.76 0.00 46.70 3.67
5071 6013 1.207089 GTGGAATGATCCTCACGGTGA 59.793 52.381 10.88 10.88 46.70 4.02
5072 6014 1.208052 AGTGGAATGATCCTCACGGTG 59.792 52.381 0.56 0.56 46.70 4.94
5073 6015 1.208052 CAGTGGAATGATCCTCACGGT 59.792 52.381 0.00 0.00 46.70 4.83
5074 6016 1.482182 TCAGTGGAATGATCCTCACGG 59.518 52.381 0.00 0.00 46.70 4.94
5075 6017 2.967599 TCAGTGGAATGATCCTCACG 57.032 50.000 0.00 0.00 46.70 4.35
5089 6031 1.759445 CTCCTCCTACCACCATCAGTG 59.241 57.143 0.00 0.00 46.83 3.66
5090 6032 1.343478 CCTCCTCCTACCACCATCAGT 60.343 57.143 0.00 0.00 0.00 3.41
5091 6033 1.343478 ACCTCCTCCTACCACCATCAG 60.343 57.143 0.00 0.00 0.00 2.90
5092 6034 0.716591 ACCTCCTCCTACCACCATCA 59.283 55.000 0.00 0.00 0.00 3.07
5093 6035 1.415200 GACCTCCTCCTACCACCATC 58.585 60.000 0.00 0.00 0.00 3.51
5094 6036 0.397254 CGACCTCCTCCTACCACCAT 60.397 60.000 0.00 0.00 0.00 3.55
5095 6037 1.000019 CGACCTCCTCCTACCACCA 60.000 63.158 0.00 0.00 0.00 4.17
5096 6038 0.752376 CTCGACCTCCTCCTACCACC 60.752 65.000 0.00 0.00 0.00 4.61
5097 6039 0.034283 ACTCGACCTCCTCCTACCAC 60.034 60.000 0.00 0.00 0.00 4.16
5098 6040 0.255318 GACTCGACCTCCTCCTACCA 59.745 60.000 0.00 0.00 0.00 3.25
5099 6041 0.255318 TGACTCGACCTCCTCCTACC 59.745 60.000 0.00 0.00 0.00 3.18
5100 6042 1.950909 CATGACTCGACCTCCTCCTAC 59.049 57.143 0.00 0.00 0.00 3.18
5101 6043 1.133761 CCATGACTCGACCTCCTCCTA 60.134 57.143 0.00 0.00 0.00 2.94
5102 6044 0.396417 CCATGACTCGACCTCCTCCT 60.396 60.000 0.00 0.00 0.00 3.69
5103 6045 0.684805 ACCATGACTCGACCTCCTCC 60.685 60.000 0.00 0.00 0.00 4.30
5104 6046 0.457851 CACCATGACTCGACCTCCTC 59.542 60.000 0.00 0.00 0.00 3.71
5105 6047 0.039764 TCACCATGACTCGACCTCCT 59.960 55.000 0.00 0.00 0.00 3.69
5106 6048 0.457851 CTCACCATGACTCGACCTCC 59.542 60.000 0.00 0.00 0.00 4.30
5107 6049 0.457851 CCTCACCATGACTCGACCTC 59.542 60.000 0.00 0.00 0.00 3.85
5108 6050 0.039764 TCCTCACCATGACTCGACCT 59.960 55.000 0.00 0.00 0.00 3.85
5109 6051 1.067821 GATCCTCACCATGACTCGACC 59.932 57.143 0.00 0.00 0.00 4.79
5110 6052 1.751351 TGATCCTCACCATGACTCGAC 59.249 52.381 0.00 0.00 0.00 4.20
5111 6053 2.143876 TGATCCTCACCATGACTCGA 57.856 50.000 0.00 0.00 0.00 4.04
5112 6054 3.388308 GAATGATCCTCACCATGACTCG 58.612 50.000 0.00 0.00 0.00 4.18
5113 6055 3.135348 TGGAATGATCCTCACCATGACTC 59.865 47.826 0.00 0.00 46.70 3.36
5114 6056 3.117745 TGGAATGATCCTCACCATGACT 58.882 45.455 0.00 0.00 46.70 3.41
5115 6057 3.118112 ACTGGAATGATCCTCACCATGAC 60.118 47.826 0.00 0.00 46.70 3.06
5116 6058 3.117745 ACTGGAATGATCCTCACCATGA 58.882 45.455 0.00 0.00 46.70 3.07
5117 6059 3.118149 TCACTGGAATGATCCTCACCATG 60.118 47.826 0.00 0.00 46.70 3.66
5118 6060 3.117745 TCACTGGAATGATCCTCACCAT 58.882 45.455 0.00 0.00 46.70 3.55
5119 6061 2.550175 TCACTGGAATGATCCTCACCA 58.450 47.619 0.00 0.00 46.70 4.17
5120 6062 3.474600 CATCACTGGAATGATCCTCACC 58.525 50.000 0.00 0.00 46.70 4.02
5121 6063 3.118112 ACCATCACTGGAATGATCCTCAC 60.118 47.826 0.00 0.00 46.37 3.51
5122 6064 3.117745 ACCATCACTGGAATGATCCTCA 58.882 45.455 0.00 0.00 46.37 3.86
5123 6065 3.474600 CACCATCACTGGAATGATCCTC 58.525 50.000 0.00 0.00 46.37 3.71
5124 6066 2.174210 CCACCATCACTGGAATGATCCT 59.826 50.000 0.00 0.00 46.37 3.24
5125 6067 2.092212 ACCACCATCACTGGAATGATCC 60.092 50.000 0.00 0.00 46.37 3.36
5126 6068 3.287867 ACCACCATCACTGGAATGATC 57.712 47.619 0.00 0.00 46.37 2.92
5127 6069 3.137176 CCTACCACCATCACTGGAATGAT 59.863 47.826 0.00 0.00 46.37 2.45
5128 6070 2.505407 CCTACCACCATCACTGGAATGA 59.495 50.000 0.00 0.00 46.37 2.57
5129 6071 2.505407 TCCTACCACCATCACTGGAATG 59.495 50.000 0.00 0.00 46.37 2.67
5130 6072 2.774234 CTCCTACCACCATCACTGGAAT 59.226 50.000 0.00 0.00 46.37 3.01
5131 6073 2.187958 CTCCTACCACCATCACTGGAA 58.812 52.381 0.00 0.00 46.37 3.53
5132 6074 1.622449 CCTCCTACCACCATCACTGGA 60.622 57.143 0.00 0.00 46.37 3.86
5558 6590 2.223745 GATGACTCGACCTCCTCCTAC 58.776 57.143 0.00 0.00 0.00 3.18
5808 6840 5.301805 GGGAACACTTCTCTTTTCCATTTCA 59.698 40.000 0.00 0.00 39.53 2.69
5819 6851 1.700186 GGTGAAGGGGAACACTTCTCT 59.300 52.381 12.00 0.00 43.59 3.10
5841 7038 1.815003 CTCGACATTGGGCGCATCA 60.815 57.895 10.83 3.73 0.00 3.07
5846 7043 0.527817 GTACTCCTCGACATTGGGCG 60.528 60.000 0.00 0.00 0.00 6.13
5873 7070 3.118408 TGGTAGCACCATATTCAGTGGTC 60.118 47.826 4.16 0.00 46.79 4.02
6084 7281 3.569701 GGACATACCTATCCGTAACGGAA 59.430 47.826 0.00 0.00 46.78 4.30
6110 7307 2.195567 TGGTTCGTTCGGTCGAGGT 61.196 57.895 0.00 0.00 40.86 3.85
6133 7330 4.694339 GGCAGATAACCGTCAACTCTTAT 58.306 43.478 0.00 0.00 0.00 1.73
6135 7332 2.674177 CGGCAGATAACCGTCAACTCTT 60.674 50.000 0.00 0.00 45.70 2.85
6212 7409 1.396653 CAGGGCTTTTCATAGGCTGG 58.603 55.000 0.00 0.00 40.34 4.85
6226 7423 1.809567 CTGTTGGTTTCCTGCAGGGC 61.810 60.000 32.23 21.09 35.41 5.19
6316 7515 1.527380 GCACCACCTCGGGTTGAAA 60.527 57.895 1.93 0.00 39.79 2.69
6325 7524 2.434359 GTACGCTGGCACCACCTC 60.434 66.667 0.00 0.00 40.22 3.85
6497 7720 0.250252 CCATTTGCTTGGCCCGTTTT 60.250 50.000 0.00 0.00 0.00 2.43
6500 7723 1.532794 TTCCATTTGCTTGGCCCGT 60.533 52.632 0.00 0.00 36.66 5.28
6507 7730 6.615088 CATTATATAGCGCTTCCATTTGCTT 58.385 36.000 18.68 0.00 38.82 3.91
6564 7788 7.657354 ACAAATTTGGAGCAATAGAAAAAGACC 59.343 33.333 21.74 0.00 0.00 3.85
6618 7845 1.831106 TCCGAGTCTGGCATACAACAT 59.169 47.619 5.77 0.00 0.00 2.71
6627 7854 0.321996 AGAAACCTTCCGAGTCTGGC 59.678 55.000 0.00 0.00 0.00 4.85
6653 7880 1.669211 GGGTCACTACAAGTCGAGCAC 60.669 57.143 0.00 0.00 30.75 4.40
6658 7885 2.349297 GTGAGGGTCACTACAAGTCG 57.651 55.000 0.00 0.00 43.73 4.18
6729 7979 5.013079 TCAAGCATCCTGAGAAAAGAGGTAA 59.987 40.000 0.00 0.00 0.00 2.85
6789 8050 1.337071 ACTACATACATGCCCTCGACG 59.663 52.381 0.00 0.00 0.00 5.12
6830 8091 0.748005 ACATACATGCCCTCAACGCC 60.748 55.000 0.00 0.00 0.00 5.68
6831 8092 1.867233 CTACATACATGCCCTCAACGC 59.133 52.381 0.00 0.00 0.00 4.84
6832 8093 3.179443 ACTACATACATGCCCTCAACG 57.821 47.619 0.00 0.00 0.00 4.10
6833 8094 5.640732 CAAAACTACATACATGCCCTCAAC 58.359 41.667 0.00 0.00 0.00 3.18
6834 8095 4.157656 GCAAAACTACATACATGCCCTCAA 59.842 41.667 0.00 0.00 0.00 3.02
6835 8096 3.694072 GCAAAACTACATACATGCCCTCA 59.306 43.478 0.00 0.00 0.00 3.86
6836 8097 3.066760 GGCAAAACTACATACATGCCCTC 59.933 47.826 3.25 0.00 45.84 4.30
6837 8098 3.023832 GGCAAAACTACATACATGCCCT 58.976 45.455 3.25 0.00 45.84 5.19
6838 8099 3.436700 GGCAAAACTACATACATGCCC 57.563 47.619 3.25 0.00 45.84 5.36
6840 8101 3.374058 ACGAGGCAAAACTACATACATGC 59.626 43.478 0.00 0.00 0.00 4.06
6841 8102 4.259810 CGACGAGGCAAAACTACATACATG 60.260 45.833 0.00 0.00 0.00 3.21
6842 8103 3.863424 CGACGAGGCAAAACTACATACAT 59.137 43.478 0.00 0.00 0.00 2.29
6843 8104 3.057386 TCGACGAGGCAAAACTACATACA 60.057 43.478 0.00 0.00 0.00 2.29
6844 8105 3.504863 TCGACGAGGCAAAACTACATAC 58.495 45.455 0.00 0.00 0.00 2.39
6845 8106 3.853831 TCGACGAGGCAAAACTACATA 57.146 42.857 0.00 0.00 0.00 2.29
6846 8107 2.736144 TCGACGAGGCAAAACTACAT 57.264 45.000 0.00 0.00 0.00 2.29
6847 8108 2.512485 TTCGACGAGGCAAAACTACA 57.488 45.000 0.00 0.00 0.00 2.74
6848 8109 3.678548 AGAATTCGACGAGGCAAAACTAC 59.321 43.478 0.00 0.00 0.00 2.73
6849 8110 3.921677 AGAATTCGACGAGGCAAAACTA 58.078 40.909 0.00 0.00 0.00 2.24
6850 8111 2.767505 AGAATTCGACGAGGCAAAACT 58.232 42.857 0.00 0.00 0.00 2.66
6851 8112 3.537793 AAGAATTCGACGAGGCAAAAC 57.462 42.857 0.00 0.00 0.00 2.43
6852 8113 6.759356 TCATATAAGAATTCGACGAGGCAAAA 59.241 34.615 0.00 0.00 0.00 2.44
6853 8114 6.277605 TCATATAAGAATTCGACGAGGCAAA 58.722 36.000 0.00 0.00 0.00 3.68
6854 8115 5.838529 TCATATAAGAATTCGACGAGGCAA 58.161 37.500 0.00 0.00 0.00 4.52
6855 8116 5.447624 TCATATAAGAATTCGACGAGGCA 57.552 39.130 0.00 0.00 0.00 4.75
6856 8117 5.164177 CGTTCATATAAGAATTCGACGAGGC 60.164 44.000 0.00 0.00 0.00 4.70
6857 8118 5.164177 GCGTTCATATAAGAATTCGACGAGG 60.164 44.000 0.00 0.00 0.00 4.63
6858 8119 5.164177 GGCGTTCATATAAGAATTCGACGAG 60.164 44.000 0.00 0.00 0.00 4.18
6859 8120 4.678287 GGCGTTCATATAAGAATTCGACGA 59.322 41.667 0.00 0.00 0.00 4.20
6860 8121 4.143389 GGGCGTTCATATAAGAATTCGACG 60.143 45.833 0.00 1.15 28.88 5.12
6861 8122 4.989168 AGGGCGTTCATATAAGAATTCGAC 59.011 41.667 0.00 2.47 0.00 4.20
6862 8123 4.988540 CAGGGCGTTCATATAAGAATTCGA 59.011 41.667 0.00 0.00 0.00 3.71
6863 8124 4.750098 ACAGGGCGTTCATATAAGAATTCG 59.250 41.667 0.00 0.00 0.00 3.34
6864 8125 6.619801 AACAGGGCGTTCATATAAGAATTC 57.380 37.500 0.00 0.00 29.27 2.17
6877 8138 1.740296 CGATTCCGAACAGGGCGTT 60.740 57.895 0.00 0.00 41.86 4.84
6878 8139 2.125673 CGATTCCGAACAGGGCGT 60.126 61.111 0.00 0.00 41.52 5.68
6879 8140 3.564027 GCGATTCCGAACAGGGCG 61.564 66.667 0.00 0.00 41.52 6.13
6880 8141 2.125106 AGCGATTCCGAACAGGGC 60.125 61.111 0.00 0.00 41.52 5.19
6881 8142 1.521681 GGAGCGATTCCGAACAGGG 60.522 63.158 0.00 0.00 41.52 4.45
6882 8143 4.110493 GGAGCGATTCCGAACAGG 57.890 61.111 0.00 0.00 42.97 4.00
6901 8162 2.743928 GGGAGCTGTGTTGCGGAG 60.744 66.667 0.00 0.00 38.13 4.63
6902 8163 4.680237 CGGGAGCTGTGTTGCGGA 62.680 66.667 0.00 0.00 38.13 5.54
6904 8165 4.680237 TCCGGGAGCTGTGTTGCG 62.680 66.667 0.00 0.00 38.13 4.85
6905 8166 2.743928 CTCCGGGAGCTGTGTTGC 60.744 66.667 11.83 0.00 0.00 4.17
6919 8180 3.075005 TACAGCTCCACCCGCTCC 61.075 66.667 0.00 0.00 35.07 4.70
6920 8181 1.889530 AACTACAGCTCCACCCGCTC 61.890 60.000 0.00 0.00 35.07 5.03
6921 8182 1.913762 AACTACAGCTCCACCCGCT 60.914 57.895 0.00 0.00 38.49 5.52
6922 8183 1.741770 CAACTACAGCTCCACCCGC 60.742 63.158 0.00 0.00 0.00 6.13
6923 8184 1.079127 CCAACTACAGCTCCACCCG 60.079 63.158 0.00 0.00 0.00 5.28
6924 8185 0.690762 TTCCAACTACAGCTCCACCC 59.309 55.000 0.00 0.00 0.00 4.61
6925 8186 2.561478 TTTCCAACTACAGCTCCACC 57.439 50.000 0.00 0.00 0.00 4.61
6926 8187 3.674997 TGATTTCCAACTACAGCTCCAC 58.325 45.455 0.00 0.00 0.00 4.02
6927 8188 3.307691 CCTGATTTCCAACTACAGCTCCA 60.308 47.826 0.00 0.00 0.00 3.86
6928 8189 3.274288 CCTGATTTCCAACTACAGCTCC 58.726 50.000 0.00 0.00 0.00 4.70
6929 8190 3.055094 TCCCTGATTTCCAACTACAGCTC 60.055 47.826 0.00 0.00 0.00 4.09
6930 8191 2.912956 TCCCTGATTTCCAACTACAGCT 59.087 45.455 0.00 0.00 0.00 4.24
6931 8192 3.274288 CTCCCTGATTTCCAACTACAGC 58.726 50.000 0.00 0.00 0.00 4.40
6932 8193 3.054802 AGCTCCCTGATTTCCAACTACAG 60.055 47.826 0.00 0.00 0.00 2.74
6933 8194 2.912956 AGCTCCCTGATTTCCAACTACA 59.087 45.455 0.00 0.00 0.00 2.74
6934 8195 3.274288 CAGCTCCCTGATTTCCAACTAC 58.726 50.000 0.00 0.00 41.77 2.73
6935 8196 2.356125 GCAGCTCCCTGATTTCCAACTA 60.356 50.000 0.00 0.00 41.77 2.24
6936 8197 1.615384 GCAGCTCCCTGATTTCCAACT 60.615 52.381 0.00 0.00 41.77 3.16
6937 8198 0.813821 GCAGCTCCCTGATTTCCAAC 59.186 55.000 0.00 0.00 41.77 3.77
6938 8199 0.405198 TGCAGCTCCCTGATTTCCAA 59.595 50.000 0.00 0.00 41.77 3.53
6939 8200 0.322816 GTGCAGCTCCCTGATTTCCA 60.323 55.000 0.00 0.00 41.77 3.53
6940 8201 0.034670 AGTGCAGCTCCCTGATTTCC 60.035 55.000 0.00 0.00 41.77 3.13
6941 8202 1.831580 AAGTGCAGCTCCCTGATTTC 58.168 50.000 0.00 0.00 41.77 2.17
6942 8203 2.165998 GAAAGTGCAGCTCCCTGATTT 58.834 47.619 0.00 0.00 41.77 2.17
6943 8204 1.615384 GGAAAGTGCAGCTCCCTGATT 60.615 52.381 0.00 0.00 41.77 2.57
6944 8205 0.034670 GGAAAGTGCAGCTCCCTGAT 60.035 55.000 0.00 0.00 41.77 2.90
6945 8206 1.130054 AGGAAAGTGCAGCTCCCTGA 61.130 55.000 5.26 0.00 41.77 3.86
6946 8207 0.676151 GAGGAAAGTGCAGCTCCCTG 60.676 60.000 11.84 0.00 42.13 4.45
6947 8208 1.682257 GAGGAAAGTGCAGCTCCCT 59.318 57.895 5.26 7.24 0.00 4.20
6948 8209 1.743252 CGAGGAAAGTGCAGCTCCC 60.743 63.158 5.26 3.39 0.00 4.30
6949 8210 2.394563 GCGAGGAAAGTGCAGCTCC 61.395 63.158 0.00 0.00 0.00 4.70
6950 8211 1.357991 GAGCGAGGAAAGTGCAGCTC 61.358 60.000 4.79 4.79 43.11 4.09
6951 8212 1.375268 GAGCGAGGAAAGTGCAGCT 60.375 57.895 0.00 0.00 37.69 4.24
6952 8213 2.394563 GGAGCGAGGAAAGTGCAGC 61.395 63.158 0.00 0.00 0.00 5.25
6953 8214 1.743252 GGGAGCGAGGAAAGTGCAG 60.743 63.158 0.00 0.00 0.00 4.41
6954 8215 2.347490 GGGAGCGAGGAAAGTGCA 59.653 61.111 0.00 0.00 0.00 4.57
6955 8216 2.815647 CGGGAGCGAGGAAAGTGC 60.816 66.667 0.00 0.00 0.00 4.40
6956 8217 1.153745 CTCGGGAGCGAGGAAAGTG 60.154 63.158 0.00 0.00 32.81 3.16
6957 8218 0.684805 ATCTCGGGAGCGAGGAAAGT 60.685 55.000 0.00 0.00 36.71 2.66
6958 8219 0.461961 AATCTCGGGAGCGAGGAAAG 59.538 55.000 0.00 0.00 36.71 2.62
6959 8220 0.460311 GAATCTCGGGAGCGAGGAAA 59.540 55.000 0.00 0.00 36.71 3.13
6960 8221 1.392710 GGAATCTCGGGAGCGAGGAA 61.393 60.000 0.00 0.00 36.71 3.36
6961 8222 1.828660 GGAATCTCGGGAGCGAGGA 60.829 63.158 0.00 0.00 36.71 3.71
6962 8223 1.830408 AGGAATCTCGGGAGCGAGG 60.830 63.158 0.00 0.00 36.71 4.63
6963 8224 1.361993 CAGGAATCTCGGGAGCGAG 59.638 63.158 0.00 0.00 37.35 5.03
6964 8225 0.106868 TACAGGAATCTCGGGAGCGA 60.107 55.000 0.00 0.00 0.00 4.93
6965 8226 0.030908 GTACAGGAATCTCGGGAGCG 59.969 60.000 0.00 0.00 0.00 5.03
6966 8227 1.067821 CAGTACAGGAATCTCGGGAGC 59.932 57.143 0.00 0.00 0.00 4.70
6967 8228 1.683917 CCAGTACAGGAATCTCGGGAG 59.316 57.143 0.00 0.00 0.00 4.30
6968 8229 1.688311 CCCAGTACAGGAATCTCGGGA 60.688 57.143 5.75 0.00 34.10 5.14
6969 8230 0.753262 CCCAGTACAGGAATCTCGGG 59.247 60.000 5.75 0.00 0.00 5.14
6970 8231 1.137086 CACCCAGTACAGGAATCTCGG 59.863 57.143 5.75 0.00 0.00 4.63
6971 8232 1.137086 CCACCCAGTACAGGAATCTCG 59.863 57.143 5.75 0.00 0.00 4.04
6972 8233 1.486726 CCCACCCAGTACAGGAATCTC 59.513 57.143 5.75 0.00 0.00 2.75
6973 8234 1.203440 ACCCACCCAGTACAGGAATCT 60.203 52.381 5.75 0.00 0.00 2.40
6974 8235 1.286248 ACCCACCCAGTACAGGAATC 58.714 55.000 5.75 0.00 0.00 2.52
6975 8236 1.354368 CAACCCACCCAGTACAGGAAT 59.646 52.381 5.75 0.00 0.00 3.01
6976 8237 0.768622 CAACCCACCCAGTACAGGAA 59.231 55.000 5.75 0.00 0.00 3.36
6977 8238 0.104882 TCAACCCACCCAGTACAGGA 60.105 55.000 5.75 0.00 0.00 3.86
6978 8239 0.036306 GTCAACCCACCCAGTACAGG 59.964 60.000 0.00 0.00 0.00 4.00
6979 8240 0.320421 CGTCAACCCACCCAGTACAG 60.320 60.000 0.00 0.00 0.00 2.74
6980 8241 0.759812 TCGTCAACCCACCCAGTACA 60.760 55.000 0.00 0.00 0.00 2.90
6981 8242 0.393820 TTCGTCAACCCACCCAGTAC 59.606 55.000 0.00 0.00 0.00 2.73
6982 8243 0.393820 GTTCGTCAACCCACCCAGTA 59.606 55.000 0.00 0.00 0.00 2.74
6983 8244 1.147600 GTTCGTCAACCCACCCAGT 59.852 57.895 0.00 0.00 0.00 4.00
6984 8245 0.884704 CTGTTCGTCAACCCACCCAG 60.885 60.000 0.00 0.00 0.00 4.45
6985 8246 1.147376 CTGTTCGTCAACCCACCCA 59.853 57.895 0.00 0.00 0.00 4.51
6986 8247 1.599797 CCTGTTCGTCAACCCACCC 60.600 63.158 0.00 0.00 0.00 4.61
6987 8248 1.599797 CCCTGTTCGTCAACCCACC 60.600 63.158 0.00 0.00 0.00 4.61
6988 8249 2.258726 GCCCTGTTCGTCAACCCAC 61.259 63.158 0.00 0.00 0.00 4.61
6989 8250 2.112297 GCCCTGTTCGTCAACCCA 59.888 61.111 0.00 0.00 0.00 4.51
6990 8251 2.671963 GGCCCTGTTCGTCAACCC 60.672 66.667 0.00 0.00 0.00 4.11
6991 8252 2.999739 TTCGGCCCTGTTCGTCAACC 63.000 60.000 0.00 0.00 0.00 3.77
6992 8253 1.566018 CTTCGGCCCTGTTCGTCAAC 61.566 60.000 0.00 0.00 0.00 3.18
6993 8254 1.301401 CTTCGGCCCTGTTCGTCAA 60.301 57.895 0.00 0.00 0.00 3.18
6994 8255 1.541310 ATCTTCGGCCCTGTTCGTCA 61.541 55.000 0.00 0.00 0.00 4.35
6995 8256 0.391263 AATCTTCGGCCCTGTTCGTC 60.391 55.000 0.00 0.00 0.00 4.20
6996 8257 0.673644 CAATCTTCGGCCCTGTTCGT 60.674 55.000 0.00 0.00 0.00 3.85
6997 8258 0.391130 TCAATCTTCGGCCCTGTTCG 60.391 55.000 0.00 0.00 0.00 3.95
6998 8259 1.373570 CTCAATCTTCGGCCCTGTTC 58.626 55.000 0.00 0.00 0.00 3.18
6999 8260 0.678048 GCTCAATCTTCGGCCCTGTT 60.678 55.000 0.00 0.00 0.00 3.16
7000 8261 1.078143 GCTCAATCTTCGGCCCTGT 60.078 57.895 0.00 0.00 0.00 4.00
7001 8262 0.393537 AAGCTCAATCTTCGGCCCTG 60.394 55.000 0.00 0.00 0.00 4.45
7002 8263 0.329596 AAAGCTCAATCTTCGGCCCT 59.670 50.000 0.00 0.00 0.00 5.19
7003 8264 0.453390 CAAAGCTCAATCTTCGGCCC 59.547 55.000 0.00 0.00 0.00 5.80
7004 8265 1.135575 CACAAAGCTCAATCTTCGGCC 60.136 52.381 0.00 0.00 0.00 6.13
7005 8266 1.537202 ACACAAAGCTCAATCTTCGGC 59.463 47.619 0.00 0.00 0.00 5.54
7006 8267 2.159787 CGACACAAAGCTCAATCTTCGG 60.160 50.000 0.00 0.00 0.00 4.30
7007 8268 2.731451 TCGACACAAAGCTCAATCTTCG 59.269 45.455 0.00 0.00 0.00 3.79
7035 8296 4.501198 GCTCTAACAAAGTAGCGTGAGATC 59.499 45.833 0.00 0.00 0.00 2.75
7046 8307 3.128938 AGCTACGATCGCTCTAACAAAGT 59.871 43.478 16.60 0.00 30.49 2.66
7065 8326 4.099727 GGAAGAGTATTCCGGTAGAAAGCT 59.900 45.833 0.00 0.00 38.21 3.74
7071 8332 4.957684 AATGGGAAGAGTATTCCGGTAG 57.042 45.455 10.37 0.00 39.46 3.18
7130 8391 4.092816 CAAACGCGGCGTAAAGATTATTT 58.907 39.130 29.63 12.85 39.99 1.40
7131 8392 3.486209 CCAAACGCGGCGTAAAGATTATT 60.486 43.478 29.63 13.61 39.99 1.40
7132 8393 2.031191 CCAAACGCGGCGTAAAGATTAT 59.969 45.455 29.63 7.42 39.99 1.28
7133 8394 1.394227 CCAAACGCGGCGTAAAGATTA 59.606 47.619 29.63 0.00 39.99 1.75
7134 8395 0.167251 CCAAACGCGGCGTAAAGATT 59.833 50.000 29.63 15.93 39.99 2.40
7135 8396 1.791662 CCAAACGCGGCGTAAAGAT 59.208 52.632 29.63 9.94 39.99 2.40
7136 8397 2.957052 GCCAAACGCGGCGTAAAGA 61.957 57.895 29.63 0.00 43.52 2.52
7137 8398 2.501008 GCCAAACGCGGCGTAAAG 60.501 61.111 29.63 19.70 43.52 1.85
7144 8405 1.136169 GTACTTTGTAGCCAAACGCGG 60.136 52.381 12.47 0.00 44.76 6.46
7145 8406 1.527736 TGTACTTTGTAGCCAAACGCG 59.472 47.619 3.53 3.53 44.76 6.01
7146 8407 3.824414 ATGTACTTTGTAGCCAAACGC 57.176 42.857 0.00 0.00 35.67 4.84
7147 8408 6.081693 GGTTTATGTACTTTGTAGCCAAACG 58.918 40.000 0.00 0.00 35.67 3.60
7148 8409 6.208007 AGGGTTTATGTACTTTGTAGCCAAAC 59.792 38.462 0.00 0.00 35.67 2.93
7149 8410 6.207810 CAGGGTTTATGTACTTTGTAGCCAAA 59.792 38.462 0.00 0.00 38.22 3.28
7150 8411 5.708230 CAGGGTTTATGTACTTTGTAGCCAA 59.292 40.000 0.00 0.00 0.00 4.52
7151 8412 5.250200 CAGGGTTTATGTACTTTGTAGCCA 58.750 41.667 0.00 0.00 0.00 4.75
7152 8413 5.813080 CAGGGTTTATGTACTTTGTAGCC 57.187 43.478 0.00 0.00 0.00 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.