Multiple sequence alignment - TraesCS5A01G435600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G435600 chr5A 100.000 6216 0 0 1 6216 618955254 618949039 0.000000e+00 11479.0
1 TraesCS5A01G435600 chr5A 92.600 1473 74 17 3105 4555 618868099 618866640 0.000000e+00 2084.0
2 TraesCS5A01G435600 chr5A 88.759 427 39 7 4583 5006 618866519 618866099 1.190000e-141 514.0
3 TraesCS5A01G435600 chr5A 91.304 276 24 0 5941 6216 618865399 618865124 1.640000e-100 377.0
4 TraesCS5A01G435600 chr5A 94.898 196 7 3 2664 2857 618869391 618869197 2.820000e-78 303.0
5 TraesCS5A01G435600 chr5A 90.135 223 22 0 2153 2375 618870339 618870117 2.190000e-74 291.0
6 TraesCS5A01G435600 chr5A 91.414 198 16 1 2903 3100 618869212 618869016 2.860000e-68 270.0
7 TraesCS5A01G435600 chr5A 89.474 76 4 4 4956 5030 618950240 618950168 6.630000e-15 93.5
8 TraesCS5A01G435600 chr5A 89.474 76 4 4 5015 5087 618950299 618950225 6.630000e-15 93.5
9 TraesCS5A01G435600 chr5B 91.454 2118 118 30 2950 5026 611376601 611374506 0.000000e+00 2850.0
10 TraesCS5A01G435600 chr5B 81.811 1358 158 37 1036 2375 611378493 611377207 0.000000e+00 1057.0
11 TraesCS5A01G435600 chr5B 91.772 474 32 4 2387 2857 611377085 611376616 0.000000e+00 652.0
12 TraesCS5A01G435600 chr5B 85.196 331 36 6 5035 5355 611374555 611374228 1.670000e-85 327.0
13 TraesCS5A01G435600 chr5B 87.065 201 16 5 5493 5692 611373956 611373765 1.050000e-52 219.0
14 TraesCS5A01G435600 chr5D 93.309 1629 90 7 4602 6215 494803985 494802361 0.000000e+00 2386.0
15 TraesCS5A01G435600 chr5D 93.173 1494 71 15 3097 4568 494805541 494804057 0.000000e+00 2165.0
16 TraesCS5A01G435600 chr5D 91.447 1099 61 17 1768 2857 494806822 494805748 0.000000e+00 1478.0
17 TraesCS5A01G435600 chr5D 88.435 735 44 18 33 755 35829285 35828580 0.000000e+00 848.0
18 TraesCS5A01G435600 chr5D 84.741 734 80 13 1045 1764 494807580 494806865 0.000000e+00 706.0
19 TraesCS5A01G435600 chr5D 90.991 222 8 5 3 213 57087130 57086910 7.880000e-74 289.0
20 TraesCS5A01G435600 chr5D 90.769 195 18 0 2903 3097 494805763 494805569 1.720000e-65 261.0
21 TraesCS5A01G435600 chr2A 96.702 758 17 3 1 756 743401990 743402741 0.000000e+00 1254.0
22 TraesCS5A01G435600 chr2A 79.417 515 95 10 3424 3933 319023912 319023404 2.760000e-93 353.0
23 TraesCS5A01G435600 chr2A 79.474 380 58 13 4168 4538 319023008 319022640 1.030000e-62 252.0
24 TraesCS5A01G435600 chr6A 95.664 761 19 6 1 756 343421893 343422644 0.000000e+00 1210.0
25 TraesCS5A01G435600 chr4A 94.848 757 11 4 1 756 402267804 402267075 0.000000e+00 1157.0
26 TraesCS5A01G435600 chr4A 90.399 552 29 14 3 543 606640903 606640365 0.000000e+00 704.0
27 TraesCS5A01G435600 chr4A 90.036 552 31 14 3 543 606637044 606636506 0.000000e+00 693.0
28 TraesCS5A01G435600 chr4A 90.036 552 30 18 3 543 606633184 606632647 0.000000e+00 691.0
29 TraesCS5A01G435600 chr3D 94.327 758 19 6 1 755 419581628 419580892 0.000000e+00 1140.0
30 TraesCS5A01G435600 chr3D 87.871 742 47 18 33 763 598298247 598298956 0.000000e+00 832.0
31 TraesCS5A01G435600 chr3D 91.489 47 4 0 2856 2902 472941277 472941231 1.450000e-06 65.8
32 TraesCS5A01G435600 chr3D 95.000 40 2 0 2857 2896 403093885 403093924 5.200000e-06 63.9
33 TraesCS5A01G435600 chr7B 87.696 764 59 20 8 763 741681853 741682589 0.000000e+00 857.0
34 TraesCS5A01G435600 chr7B 86.275 51 7 0 727 777 123310075 123310125 8.700000e-04 56.5
35 TraesCS5A01G435600 chr1B 87.484 775 57 20 3 756 31013797 31014552 0.000000e+00 857.0
36 TraesCS5A01G435600 chr1B 97.436 39 1 0 2859 2897 6540916 6540954 4.020000e-07 67.6
37 TraesCS5A01G435600 chr1B 97.368 38 1 0 2858 2895 594836205 594836242 1.450000e-06 65.8
38 TraesCS5A01G435600 chr6B 87.063 773 55 20 3 755 698023568 698024315 0.000000e+00 832.0
39 TraesCS5A01G435600 chr7A 86.916 428 41 10 331 756 255907918 255908332 3.390000e-127 466.0
40 TraesCS5A01G435600 chr2D 79.223 515 96 10 3424 3933 273010520 273011028 1.280000e-91 348.0
41 TraesCS5A01G435600 chr2B 79.183 514 98 8 3424 3933 317240719 317241227 1.280000e-91 348.0
42 TraesCS5A01G435600 chr3B 80.882 136 14 9 642 771 597619572 597619701 5.130000e-16 97.1
43 TraesCS5A01G435600 chr3A 100.000 38 0 0 2857 2894 124081010 124081047 3.110000e-08 71.3
44 TraesCS5A01G435600 chr3A 93.333 45 3 0 2858 2902 362811627 362811583 4.020000e-07 67.6
45 TraesCS5A01G435600 chr3A 88.889 54 4 2 704 756 688481800 688481852 1.450000e-06 65.8
46 TraesCS5A01G435600 chr1A 97.436 39 1 0 2860 2898 89738147 89738109 4.020000e-07 67.6
47 TraesCS5A01G435600 chr7D 93.333 45 2 1 2857 2901 105969457 105969500 1.450000e-06 65.8
48 TraesCS5A01G435600 chr4B 95.122 41 2 0 2860 2900 249917777 249917737 1.450000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G435600 chr5A 618949039 618955254 6215 True 11479.000000 11479 100.000000 1 6216 1 chr5A.!!$R1 6215
1 TraesCS5A01G435600 chr5A 618865124 618870339 5215 True 639.833333 2084 91.518333 2153 6216 6 chr5A.!!$R2 4063
2 TraesCS5A01G435600 chr5B 611373765 611378493 4728 True 1021.000000 2850 87.459600 1036 5692 5 chr5B.!!$R1 4656
3 TraesCS5A01G435600 chr5D 494802361 494807580 5219 True 1399.200000 2386 90.687800 1045 6215 5 chr5D.!!$R3 5170
4 TraesCS5A01G435600 chr5D 35828580 35829285 705 True 848.000000 848 88.435000 33 755 1 chr5D.!!$R1 722
5 TraesCS5A01G435600 chr2A 743401990 743402741 751 False 1254.000000 1254 96.702000 1 756 1 chr2A.!!$F1 755
6 TraesCS5A01G435600 chr2A 319022640 319023912 1272 True 302.500000 353 79.445500 3424 4538 2 chr2A.!!$R1 1114
7 TraesCS5A01G435600 chr6A 343421893 343422644 751 False 1210.000000 1210 95.664000 1 756 1 chr6A.!!$F1 755
8 TraesCS5A01G435600 chr4A 402267075 402267804 729 True 1157.000000 1157 94.848000 1 756 1 chr4A.!!$R1 755
9 TraesCS5A01G435600 chr4A 606632647 606640903 8256 True 696.000000 704 90.157000 3 543 3 chr4A.!!$R2 540
10 TraesCS5A01G435600 chr3D 419580892 419581628 736 True 1140.000000 1140 94.327000 1 755 1 chr3D.!!$R1 754
11 TraesCS5A01G435600 chr3D 598298247 598298956 709 False 832.000000 832 87.871000 33 763 1 chr3D.!!$F2 730
12 TraesCS5A01G435600 chr7B 741681853 741682589 736 False 857.000000 857 87.696000 8 763 1 chr7B.!!$F2 755
13 TraesCS5A01G435600 chr1B 31013797 31014552 755 False 857.000000 857 87.484000 3 756 1 chr1B.!!$F2 753
14 TraesCS5A01G435600 chr6B 698023568 698024315 747 False 832.000000 832 87.063000 3 755 1 chr6B.!!$F1 752
15 TraesCS5A01G435600 chr2D 273010520 273011028 508 False 348.000000 348 79.223000 3424 3933 1 chr2D.!!$F1 509
16 TraesCS5A01G435600 chr2B 317240719 317241227 508 False 348.000000 348 79.183000 3424 3933 1 chr2B.!!$F1 509

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
893 7296 0.034089 CCACAGGTGGGAGGAAATCC 60.034 60.000 10.67 0.00 46.81 3.01 F
1632 8065 0.037590 TGGGGCTTACACATGGTGAC 59.962 55.000 2.98 0.00 36.96 3.67 F
1682 8117 0.563173 TACTCTATGCAGGAGGGGCT 59.437 55.000 19.26 5.42 35.34 5.19 F
1683 8118 0.563173 ACTCTATGCAGGAGGGGCTA 59.437 55.000 19.26 0.00 35.34 3.93 F
1684 8119 1.062121 ACTCTATGCAGGAGGGGCTAA 60.062 52.381 19.26 0.00 35.34 3.09 F
1792 8276 1.203287 GATTGTTGCTCTTTCCCTGCC 59.797 52.381 0.00 0.00 0.00 4.85 F
3600 11452 1.269723 GTGTAAGGTTTGCTCCTTGGC 59.730 52.381 15.10 10.05 45.96 4.52 F
4361 12997 0.108898 CACAGGTCCTCTTCTCTGCG 60.109 60.000 0.00 0.00 0.00 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 8192 0.378257 CCCAAATGTTCGATGGCTCG 59.622 55.000 0.00 0.77 46.41 5.03 R
3509 11361 0.329596 AGGCTGAAGATCCCCAACAC 59.670 55.000 0.00 0.00 0.00 3.32 R
3600 11452 2.971261 GCTTTTACAAAGTTCCTTCGCG 59.029 45.455 0.00 0.00 0.00 5.87 R
3644 11504 4.384056 AGTGAAACACCTGATCAGTGAAG 58.616 43.478 21.11 8.44 41.43 3.02 R
3693 11554 4.046286 TGTCATCAGGGGTAAAAATGCT 57.954 40.909 0.00 0.00 0.00 3.79 R
3742 11603 0.685097 TCCTCAGTAGGCAAACGCTT 59.315 50.000 0.00 0.00 43.31 4.68 R
4975 13710 0.247736 GTTCACGCCAGGATCTGACT 59.752 55.000 0.00 0.00 32.44 3.41 R
5283 14031 1.078709 ATCAACGGTGATGCAAGACG 58.921 50.000 16.83 0.00 43.13 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 117 3.554692 GCCGTTCGTCTGATGCCG 61.555 66.667 0.00 0.00 0.00 5.69
756 7159 2.587956 CACGTGCACGCTTACTAGTAA 58.412 47.619 37.35 14.52 44.43 2.24
758 7161 3.059044 CACGTGCACGCTTACTAGTAAAG 59.941 47.826 37.35 14.43 44.43 1.85
764 7167 6.572621 GTGCACGCTTACTAGTAAAGAAAAAC 59.427 38.462 15.95 7.77 0.00 2.43
765 7168 6.258287 TGCACGCTTACTAGTAAAGAAAAACA 59.742 34.615 15.95 6.57 0.00 2.83
766 7169 7.127686 GCACGCTTACTAGTAAAGAAAAACAA 58.872 34.615 15.95 0.00 0.00 2.83
767 7170 7.641020 GCACGCTTACTAGTAAAGAAAAACAAA 59.359 33.333 15.95 0.00 0.00 2.83
768 7171 9.493206 CACGCTTACTAGTAAAGAAAAACAAAA 57.507 29.630 15.95 0.00 0.00 2.44
769 7172 9.712359 ACGCTTACTAGTAAAGAAAAACAAAAG 57.288 29.630 15.95 3.23 0.00 2.27
770 7173 9.925268 CGCTTACTAGTAAAGAAAAACAAAAGA 57.075 29.630 15.95 0.00 0.00 2.52
778 7181 9.478768 AGTAAAGAAAAACAAAAGAAAACGGAA 57.521 25.926 0.00 0.00 0.00 4.30
813 7216 4.864247 GGAAACCAATCCAATGAATGAACG 59.136 41.667 0.00 0.00 39.42 3.95
814 7217 3.508744 ACCAATCCAATGAATGAACGC 57.491 42.857 0.00 0.00 0.00 4.84
815 7218 2.824936 ACCAATCCAATGAATGAACGCA 59.175 40.909 0.00 0.00 0.00 5.24
816 7219 3.119388 ACCAATCCAATGAATGAACGCAG 60.119 43.478 0.00 0.00 0.00 5.18
817 7220 2.855963 CAATCCAATGAATGAACGCAGC 59.144 45.455 0.00 0.00 0.00 5.25
818 7221 0.447406 TCCAATGAATGAACGCAGCG 59.553 50.000 14.82 14.82 0.00 5.18
819 7222 0.447406 CCAATGAATGAACGCAGCGA 59.553 50.000 24.65 0.00 0.00 4.93
820 7223 1.135717 CCAATGAATGAACGCAGCGAA 60.136 47.619 24.65 6.95 0.00 4.70
821 7224 1.906966 CAATGAATGAACGCAGCGAAC 59.093 47.619 24.65 14.97 0.00 3.95
822 7225 0.095245 ATGAATGAACGCAGCGAACG 59.905 50.000 24.65 0.00 0.00 3.95
823 7226 1.859135 GAATGAACGCAGCGAACGC 60.859 57.895 24.65 11.31 42.33 4.84
824 7227 2.493088 GAATGAACGCAGCGAACGCA 62.493 55.000 24.65 13.49 44.88 5.24
825 7228 2.111932 AATGAACGCAGCGAACGCAA 62.112 50.000 24.65 0.56 44.88 4.85
826 7229 1.911293 ATGAACGCAGCGAACGCAAT 61.911 50.000 24.65 3.13 44.88 3.56
827 7230 1.440353 GAACGCAGCGAACGCAATT 60.440 52.632 24.65 2.41 44.88 2.32
828 7231 1.655697 GAACGCAGCGAACGCAATTG 61.656 55.000 24.65 11.50 44.88 2.32
829 7232 2.871080 CGCAGCGAACGCAATTGG 60.871 61.111 20.66 0.00 44.88 3.16
830 7233 2.560861 GCAGCGAACGCAATTGGA 59.439 55.556 20.66 0.00 44.88 3.53
831 7234 1.081509 GCAGCGAACGCAATTGGAA 60.082 52.632 20.66 0.00 44.88 3.53
832 7235 0.456653 GCAGCGAACGCAATTGGAAT 60.457 50.000 20.66 0.00 44.88 3.01
833 7236 1.538276 CAGCGAACGCAATTGGAATC 58.462 50.000 20.66 2.06 44.88 2.52
834 7237 0.451783 AGCGAACGCAATTGGAATCC 59.548 50.000 20.66 0.00 44.88 3.01
835 7238 0.170116 GCGAACGCAATTGGAATCCA 59.830 50.000 14.26 0.00 41.49 3.41
836 7239 1.795162 GCGAACGCAATTGGAATCCAG 60.795 52.381 14.26 0.00 41.49 3.86
837 7240 1.795162 CGAACGCAATTGGAATCCAGC 60.795 52.381 7.72 1.67 33.81 4.85
838 7241 4.696078 CGCAATTGGAATCCAGCG 57.304 55.556 17.66 17.66 39.17 5.18
841 7244 1.913317 GCAATTGGAATCCAGCGAAC 58.087 50.000 7.72 0.00 33.81 3.95
842 7245 1.795162 GCAATTGGAATCCAGCGAACG 60.795 52.381 7.72 0.00 33.81 3.95
843 7246 1.737236 CAATTGGAATCCAGCGAACGA 59.263 47.619 0.86 0.00 33.81 3.85
844 7247 2.107950 ATTGGAATCCAGCGAACGAA 57.892 45.000 0.86 0.00 33.81 3.85
845 7248 1.438651 TTGGAATCCAGCGAACGAAG 58.561 50.000 0.86 0.00 33.81 3.79
846 7249 0.606096 TGGAATCCAGCGAACGAAGA 59.394 50.000 0.00 0.00 0.00 2.87
847 7250 1.001520 TGGAATCCAGCGAACGAAGAA 59.998 47.619 0.00 0.00 0.00 2.52
848 7251 2.073816 GGAATCCAGCGAACGAAGAAA 58.926 47.619 0.00 0.00 0.00 2.52
849 7252 2.482721 GGAATCCAGCGAACGAAGAAAA 59.517 45.455 0.00 0.00 0.00 2.29
850 7253 3.479949 GAATCCAGCGAACGAAGAAAAC 58.520 45.455 0.00 0.00 0.00 2.43
851 7254 1.942677 TCCAGCGAACGAAGAAAACA 58.057 45.000 0.00 0.00 0.00 2.83
852 7255 1.864711 TCCAGCGAACGAAGAAAACAG 59.135 47.619 0.00 0.00 0.00 3.16
853 7256 1.597663 CCAGCGAACGAAGAAAACAGT 59.402 47.619 0.00 0.00 0.00 3.55
854 7257 2.599848 CCAGCGAACGAAGAAAACAGTG 60.600 50.000 0.00 0.00 0.00 3.66
855 7258 2.284150 CAGCGAACGAAGAAAACAGTGA 59.716 45.455 0.00 0.00 0.00 3.41
856 7259 2.933906 AGCGAACGAAGAAAACAGTGAA 59.066 40.909 0.00 0.00 0.00 3.18
857 7260 3.560068 AGCGAACGAAGAAAACAGTGAAT 59.440 39.130 0.00 0.00 0.00 2.57
858 7261 4.748102 AGCGAACGAAGAAAACAGTGAATA 59.252 37.500 0.00 0.00 0.00 1.75
859 7262 5.408604 AGCGAACGAAGAAAACAGTGAATAT 59.591 36.000 0.00 0.00 0.00 1.28
860 7263 5.504755 GCGAACGAAGAAAACAGTGAATATG 59.495 40.000 0.00 0.00 0.00 1.78
861 7264 6.590357 CGAACGAAGAAAACAGTGAATATGT 58.410 36.000 0.00 0.00 0.00 2.29
862 7265 6.516355 CGAACGAAGAAAACAGTGAATATGTG 59.484 38.462 0.00 0.00 0.00 3.21
863 7266 5.689819 ACGAAGAAAACAGTGAATATGTGC 58.310 37.500 0.00 0.00 0.00 4.57
864 7267 5.470098 ACGAAGAAAACAGTGAATATGTGCT 59.530 36.000 0.00 0.00 0.00 4.40
865 7268 5.791974 CGAAGAAAACAGTGAATATGTGCTG 59.208 40.000 0.00 0.00 35.31 4.41
866 7269 5.633830 AGAAAACAGTGAATATGTGCTGG 57.366 39.130 0.00 0.00 33.62 4.85
867 7270 3.855689 AAACAGTGAATATGTGCTGGC 57.144 42.857 0.00 0.00 33.62 4.85
868 7271 1.755179 ACAGTGAATATGTGCTGGCC 58.245 50.000 0.00 0.00 33.62 5.36
869 7272 1.027357 CAGTGAATATGTGCTGGCCC 58.973 55.000 0.00 0.00 0.00 5.80
870 7273 0.625316 AGTGAATATGTGCTGGCCCA 59.375 50.000 0.00 0.00 0.00 5.36
871 7274 1.027357 GTGAATATGTGCTGGCCCAG 58.973 55.000 6.32 6.32 34.12 4.45
872 7275 0.625316 TGAATATGTGCTGGCCCAGT 59.375 50.000 13.35 0.00 33.43 4.00
873 7276 1.027357 GAATATGTGCTGGCCCAGTG 58.973 55.000 13.35 0.00 33.43 3.66
874 7277 1.039233 AATATGTGCTGGCCCAGTGC 61.039 55.000 13.35 6.18 40.16 4.40
892 7295 3.577389 CCACAGGTGGGAGGAAATC 57.423 57.895 10.67 0.00 46.81 2.17
893 7296 0.034089 CCACAGGTGGGAGGAAATCC 60.034 60.000 10.67 0.00 46.81 3.01
904 7307 2.682155 AGGAAATCCTTCAGCGAGAC 57.318 50.000 0.00 0.00 46.09 3.36
905 7308 1.134965 AGGAAATCCTTCAGCGAGACG 60.135 52.381 0.00 0.00 46.09 4.18
906 7309 1.281899 GAAATCCTTCAGCGAGACGG 58.718 55.000 0.00 0.00 37.01 4.79
907 7310 0.108138 AAATCCTTCAGCGAGACGGG 60.108 55.000 5.20 1.04 36.35 5.28
908 7311 0.970937 AATCCTTCAGCGAGACGGGA 60.971 55.000 5.20 5.57 36.35 5.14
909 7312 1.668101 ATCCTTCAGCGAGACGGGAC 61.668 60.000 5.20 0.00 36.35 4.46
922 7325 3.932289 GGGACGAACACTCACGTG 58.068 61.111 9.94 9.94 46.63 4.49
923 7326 1.361271 GGGACGAACACTCACGTGA 59.639 57.895 18.88 18.88 43.97 4.35
924 7327 0.249155 GGGACGAACACTCACGTGAA 60.249 55.000 20.49 3.60 43.97 3.18
925 7328 1.129326 GGACGAACACTCACGTGAAG 58.871 55.000 20.49 16.90 43.97 3.02
926 7329 0.503117 GACGAACACTCACGTGAAGC 59.497 55.000 20.49 6.25 43.97 3.86
927 7330 0.179121 ACGAACACTCACGTGAAGCA 60.179 50.000 20.49 0.00 43.97 3.91
928 7331 0.504384 CGAACACTCACGTGAAGCAG 59.496 55.000 20.49 10.33 43.97 4.24
929 7332 0.861837 GAACACTCACGTGAAGCAGG 59.138 55.000 20.49 9.94 43.97 4.85
930 7333 0.464036 AACACTCACGTGAAGCAGGA 59.536 50.000 20.49 0.00 43.97 3.86
931 7334 0.681733 ACACTCACGTGAAGCAGGAT 59.318 50.000 20.49 0.00 43.97 3.24
932 7335 1.893137 ACACTCACGTGAAGCAGGATA 59.107 47.619 20.49 0.00 43.97 2.59
933 7336 2.299013 ACACTCACGTGAAGCAGGATAA 59.701 45.455 20.49 0.00 43.97 1.75
934 7337 3.244078 ACACTCACGTGAAGCAGGATAAA 60.244 43.478 20.49 0.00 43.97 1.40
935 7338 3.935203 CACTCACGTGAAGCAGGATAAAT 59.065 43.478 20.49 0.00 43.97 1.40
936 7339 4.393062 CACTCACGTGAAGCAGGATAAATT 59.607 41.667 20.49 0.00 43.97 1.82
937 7340 5.003804 ACTCACGTGAAGCAGGATAAATTT 58.996 37.500 20.49 0.00 0.00 1.82
938 7341 5.122396 ACTCACGTGAAGCAGGATAAATTTC 59.878 40.000 20.49 0.00 0.00 2.17
939 7342 4.092821 TCACGTGAAGCAGGATAAATTTCG 59.907 41.667 17.62 0.00 0.00 3.46
940 7343 4.000988 ACGTGAAGCAGGATAAATTTCGT 58.999 39.130 0.00 0.00 0.00 3.85
941 7344 4.142902 ACGTGAAGCAGGATAAATTTCGTG 60.143 41.667 0.00 0.00 35.22 4.35
945 7348 3.502191 GCAGGATAAATTTCGTGCCAA 57.498 42.857 11.90 0.00 46.55 4.52
946 7349 3.438360 GCAGGATAAATTTCGTGCCAAG 58.562 45.455 11.90 2.01 46.55 3.61
947 7350 3.734902 GCAGGATAAATTTCGTGCCAAGG 60.735 47.826 11.90 0.00 46.55 3.61
948 7351 2.427095 AGGATAAATTTCGTGCCAAGGC 59.573 45.455 3.61 3.61 42.35 4.35
949 7352 2.481276 GGATAAATTTCGTGCCAAGGCC 60.481 50.000 8.89 0.00 41.09 5.19
950 7353 0.892063 TAAATTTCGTGCCAAGGCCC 59.108 50.000 8.89 0.00 41.09 5.80
951 7354 1.118356 AAATTTCGTGCCAAGGCCCA 61.118 50.000 8.89 0.00 41.09 5.36
952 7355 1.118356 AATTTCGTGCCAAGGCCCAA 61.118 50.000 8.89 0.00 41.09 4.12
953 7356 1.535204 ATTTCGTGCCAAGGCCCAAG 61.535 55.000 8.89 0.00 41.09 3.61
954 7357 2.632602 TTTCGTGCCAAGGCCCAAGA 62.633 55.000 8.89 0.00 41.09 3.02
955 7358 3.365265 CGTGCCAAGGCCCAAGAC 61.365 66.667 8.89 0.00 41.09 3.01
956 7359 2.991540 GTGCCAAGGCCCAAGACC 60.992 66.667 8.89 0.00 41.09 3.85
957 7360 3.506743 TGCCAAGGCCCAAGACCA 61.507 61.111 8.89 0.00 41.09 4.02
958 7361 2.037847 GCCAAGGCCCAAGACCAT 59.962 61.111 0.00 0.00 34.56 3.55
959 7362 2.353610 GCCAAGGCCCAAGACCATG 61.354 63.158 0.00 0.00 34.56 3.66
960 7363 1.383799 CCAAGGCCCAAGACCATGA 59.616 57.895 0.00 0.00 0.00 3.07
961 7364 0.967380 CCAAGGCCCAAGACCATGAC 60.967 60.000 0.00 0.00 0.00 3.06
962 7365 1.002134 AAGGCCCAAGACCATGACG 60.002 57.895 0.00 0.00 0.00 4.35
963 7366 2.438434 GGCCCAAGACCATGACGG 60.438 66.667 0.00 0.00 42.50 4.79
964 7367 2.438434 GCCCAAGACCATGACGGG 60.438 66.667 0.00 0.00 40.22 5.28
970 7373 4.208632 GACCATGACGGGCTTGAG 57.791 61.111 0.00 0.00 41.26 3.02
971 7374 2.045926 ACCATGACGGGCTTGAGC 60.046 61.111 0.00 0.00 40.22 4.26
972 7375 3.197790 CCATGACGGGCTTGAGCG 61.198 66.667 0.00 0.00 43.26 5.03
973 7376 3.197790 CATGACGGGCTTGAGCGG 61.198 66.667 0.00 0.00 43.26 5.52
974 7377 4.473520 ATGACGGGCTTGAGCGGG 62.474 66.667 0.00 0.00 43.26 6.13
1001 7404 3.311110 AGCGGCTTCGGTCCAAGA 61.311 61.111 0.00 0.00 40.98 3.02
1002 7405 2.815647 GCGGCTTCGGTCCAAGAG 60.816 66.667 0.00 0.00 0.00 2.85
1003 7406 2.970639 CGGCTTCGGTCCAAGAGA 59.029 61.111 5.53 0.00 0.00 3.10
1004 7407 1.153745 CGGCTTCGGTCCAAGAGAG 60.154 63.158 5.53 0.00 0.00 3.20
1005 7408 1.595993 CGGCTTCGGTCCAAGAGAGA 61.596 60.000 5.53 0.00 0.00 3.10
1006 7409 0.174617 GGCTTCGGTCCAAGAGAGAG 59.825 60.000 5.53 0.00 0.00 3.20
1007 7410 1.178276 GCTTCGGTCCAAGAGAGAGA 58.822 55.000 5.53 0.00 0.00 3.10
1008 7411 1.134175 GCTTCGGTCCAAGAGAGAGAG 59.866 57.143 5.53 0.00 0.00 3.20
1009 7412 2.717390 CTTCGGTCCAAGAGAGAGAGA 58.283 52.381 0.00 0.00 0.00 3.10
1010 7413 2.881111 TCGGTCCAAGAGAGAGAGAA 57.119 50.000 0.00 0.00 0.00 2.87
1011 7414 2.717390 TCGGTCCAAGAGAGAGAGAAG 58.283 52.381 0.00 0.00 0.00 2.85
1012 7415 1.748493 CGGTCCAAGAGAGAGAGAAGG 59.252 57.143 0.00 0.00 0.00 3.46
1013 7416 2.815158 GGTCCAAGAGAGAGAGAAGGT 58.185 52.381 0.00 0.00 0.00 3.50
1014 7417 2.495669 GGTCCAAGAGAGAGAGAAGGTG 59.504 54.545 0.00 0.00 0.00 4.00
1015 7418 3.426615 GTCCAAGAGAGAGAGAAGGTGA 58.573 50.000 0.00 0.00 0.00 4.02
1016 7419 3.443681 GTCCAAGAGAGAGAGAAGGTGAG 59.556 52.174 0.00 0.00 0.00 3.51
1017 7420 3.332187 TCCAAGAGAGAGAGAAGGTGAGA 59.668 47.826 0.00 0.00 0.00 3.27
1018 7421 3.443681 CCAAGAGAGAGAGAAGGTGAGAC 59.556 52.174 0.00 0.00 0.00 3.36
1019 7422 4.078537 CAAGAGAGAGAGAAGGTGAGACA 58.921 47.826 0.00 0.00 0.00 3.41
1020 7423 3.686016 AGAGAGAGAGAAGGTGAGACAC 58.314 50.000 0.00 0.00 0.00 3.67
1079 7482 3.776347 TTGGCGCGGTGGAAGGAAA 62.776 57.895 8.83 0.00 0.00 3.13
1080 7483 3.431725 GGCGCGGTGGAAGGAAAG 61.432 66.667 8.83 0.00 0.00 2.62
1081 7484 3.431725 GCGCGGTGGAAGGAAAGG 61.432 66.667 8.83 0.00 0.00 3.11
1082 7485 2.345991 CGCGGTGGAAGGAAAGGA 59.654 61.111 0.00 0.00 0.00 3.36
1083 7486 1.302192 CGCGGTGGAAGGAAAGGAA 60.302 57.895 0.00 0.00 0.00 3.36
1220 7649 3.827898 CTCCGCCTCCACCTCGTC 61.828 72.222 0.00 0.00 0.00 4.20
1223 7652 3.827898 CGCCTCCACCTCGTCCTC 61.828 72.222 0.00 0.00 0.00 3.71
1224 7653 3.462678 GCCTCCACCTCGTCCTCC 61.463 72.222 0.00 0.00 0.00 4.30
1225 7654 2.360980 CCTCCACCTCGTCCTCCT 59.639 66.667 0.00 0.00 0.00 3.69
1226 7655 1.755008 CCTCCACCTCGTCCTCCTC 60.755 68.421 0.00 0.00 0.00 3.71
1391 7820 2.362889 TACCCTCCCCGTCGAACC 60.363 66.667 0.00 0.00 0.00 3.62
1448 7880 0.179145 GAGCCACGCGAGCTTAACTA 60.179 55.000 24.73 0.00 41.75 2.24
1456 7888 2.726989 CGCGAGCTTAACTAACGACAGA 60.727 50.000 0.00 0.00 0.00 3.41
1457 7890 3.240069 GCGAGCTTAACTAACGACAGAA 58.760 45.455 0.00 0.00 0.00 3.02
1485 7918 1.933853 GCAAGATATTTCGCGAGTGGT 59.066 47.619 9.59 0.00 0.00 4.16
1487 7920 3.785505 GCAAGATATTTCGCGAGTGGTTG 60.786 47.826 9.59 10.77 0.00 3.77
1490 7923 0.793861 TATTTCGCGAGTGGTTGTGC 59.206 50.000 9.59 0.00 0.00 4.57
1500 7933 0.889186 GTGGTTGTGCGGTTGAGGAT 60.889 55.000 0.00 0.00 0.00 3.24
1527 7960 1.078347 GGAGGGGGTTTGGATTGCA 59.922 57.895 0.00 0.00 0.00 4.08
1528 7961 0.544120 GGAGGGGGTTTGGATTGCAA 60.544 55.000 0.00 0.00 0.00 4.08
1529 7962 0.608130 GAGGGGGTTTGGATTGCAAC 59.392 55.000 0.00 0.00 0.00 4.17
1530 7963 0.105246 AGGGGGTTTGGATTGCAACA 60.105 50.000 0.00 0.00 0.00 3.33
1537 7970 2.627699 GTTTGGATTGCAACAAGAGGGA 59.372 45.455 0.00 0.00 0.00 4.20
1538 7971 2.905415 TGGATTGCAACAAGAGGGAT 57.095 45.000 0.00 0.00 0.00 3.85
1539 7972 4.314522 TTGGATTGCAACAAGAGGGATA 57.685 40.909 0.00 0.00 0.00 2.59
1589 8022 3.938963 GAGTTCCACGGCTATGAATTTCA 59.061 43.478 0.75 0.75 0.00 2.69
1593 8026 3.689161 TCCACGGCTATGAATTTCAACTG 59.311 43.478 2.68 4.29 0.00 3.16
1600 8033 6.238456 CGGCTATGAATTTCAACTGATTAGCA 60.238 38.462 20.60 0.00 0.00 3.49
1617 8050 1.276989 AGCATTGCTGAATGTTTGGGG 59.723 47.619 11.09 0.00 41.09 4.96
1618 8051 1.729284 CATTGCTGAATGTTTGGGGC 58.271 50.000 0.00 0.00 35.19 5.80
1622 8055 1.892474 TGCTGAATGTTTGGGGCTTAC 59.108 47.619 0.00 0.00 0.00 2.34
1623 8056 1.892474 GCTGAATGTTTGGGGCTTACA 59.108 47.619 0.00 0.00 0.00 2.41
1629 8062 1.133325 TGTTTGGGGCTTACACATGGT 60.133 47.619 0.00 0.00 0.00 3.55
1630 8063 1.272212 GTTTGGGGCTTACACATGGTG 59.728 52.381 0.00 0.00 39.75 4.17
1631 8064 0.774276 TTGGGGCTTACACATGGTGA 59.226 50.000 2.98 0.00 36.96 4.02
1632 8065 0.037590 TGGGGCTTACACATGGTGAC 59.962 55.000 2.98 0.00 36.96 3.67
1664 8098 8.260114 TCTCATCTGATTTTCTTACATGCTGTA 58.740 33.333 0.00 0.00 0.00 2.74
1665 8099 8.201554 TCATCTGATTTTCTTACATGCTGTAC 57.798 34.615 0.00 0.00 31.69 2.90
1667 8101 7.834068 TCTGATTTTCTTACATGCTGTACTC 57.166 36.000 0.00 0.00 31.69 2.59
1676 8111 3.033909 ACATGCTGTACTCTATGCAGGA 58.966 45.455 5.51 0.00 45.11 3.86
1677 8112 3.069300 ACATGCTGTACTCTATGCAGGAG 59.931 47.826 15.23 15.23 44.28 3.69
1678 8113 2.034878 TGCTGTACTCTATGCAGGAGG 58.965 52.381 19.26 6.72 41.13 4.30
1679 8114 1.342819 GCTGTACTCTATGCAGGAGGG 59.657 57.143 19.26 9.93 41.13 4.30
1680 8115 1.967066 CTGTACTCTATGCAGGAGGGG 59.033 57.143 19.26 7.31 37.38 4.79
1681 8116 0.682292 GTACTCTATGCAGGAGGGGC 59.318 60.000 19.26 8.54 35.34 5.80
1682 8117 0.563173 TACTCTATGCAGGAGGGGCT 59.437 55.000 19.26 5.42 35.34 5.19
1683 8118 0.563173 ACTCTATGCAGGAGGGGCTA 59.437 55.000 19.26 0.00 35.34 3.93
1684 8119 1.062121 ACTCTATGCAGGAGGGGCTAA 60.062 52.381 19.26 0.00 35.34 3.09
1685 8120 1.346068 CTCTATGCAGGAGGGGCTAAC 59.654 57.143 10.54 0.00 0.00 2.34
1719 8155 2.975732 TGCATCAAGGCAGAGTAGAG 57.024 50.000 0.00 0.00 39.25 2.43
1722 8158 3.769300 TGCATCAAGGCAGAGTAGAGTTA 59.231 43.478 0.00 0.00 39.25 2.24
1724 8160 4.987912 GCATCAAGGCAGAGTAGAGTTATC 59.012 45.833 0.00 0.00 0.00 1.75
1729 8165 6.040278 TCAAGGCAGAGTAGAGTTATCATCTG 59.960 42.308 0.00 0.00 36.56 2.90
1730 8166 5.454062 AGGCAGAGTAGAGTTATCATCTGT 58.546 41.667 0.00 0.00 36.20 3.41
1744 8184 2.229543 TCATCTGTGTGCCTTGAATTGC 59.770 45.455 0.00 0.00 0.00 3.56
1745 8185 1.689984 TCTGTGTGCCTTGAATTGCA 58.310 45.000 0.00 0.00 34.54 4.08
1752 8192 6.506147 TGTGTGCCTTGAATTGCATTATATC 58.494 36.000 0.00 0.00 40.07 1.63
1786 8265 4.248058 CATTTGGGGATTGTTGCTCTTTC 58.752 43.478 0.00 0.00 0.00 2.62
1792 8276 1.203287 GATTGTTGCTCTTTCCCTGCC 59.797 52.381 0.00 0.00 0.00 4.85
1804 8288 2.579624 TCCCTGCCTAATGGTCCTTA 57.420 50.000 0.00 0.00 35.27 2.69
1807 8291 2.241176 CCCTGCCTAATGGTCCTTACAA 59.759 50.000 0.00 0.00 35.27 2.41
1808 8292 3.117512 CCCTGCCTAATGGTCCTTACAAT 60.118 47.826 0.00 0.00 35.27 2.71
1851 8335 1.335872 GGATTGTTGCCGTGTTTCCTG 60.336 52.381 0.00 0.00 0.00 3.86
1861 8345 2.197324 GTTTCCTGGTGGGTGGCA 59.803 61.111 0.00 0.00 36.25 4.92
1863 8347 2.694920 TTTCCTGGTGGGTGGCACA 61.695 57.895 20.82 0.00 36.25 4.57
1876 8360 4.532490 GCACACCGCCTTAGCATA 57.468 55.556 0.00 0.00 39.83 3.14
1898 8382 9.195411 GCATAAATGTTCATTATAACATGGTGG 57.805 33.333 0.00 0.00 46.72 4.61
1916 8400 4.263905 TGGTGGTCATGCTCTTAATTTCCT 60.264 41.667 0.00 0.00 0.00 3.36
1924 8408 7.859875 GTCATGCTCTTAATTTCCTAATCTTGC 59.140 37.037 0.00 0.00 0.00 4.01
1962 8447 9.517609 GTTAGTGACTCGTGTAATTTATCATCT 57.482 33.333 0.00 0.00 0.00 2.90
1978 8463 2.886523 TCATCTGAGCTGGTGTTTTTGG 59.113 45.455 0.00 0.00 0.00 3.28
1979 8464 2.435372 TCTGAGCTGGTGTTTTTGGT 57.565 45.000 0.00 0.00 0.00 3.67
1980 8465 2.733956 TCTGAGCTGGTGTTTTTGGTT 58.266 42.857 0.00 0.00 0.00 3.67
1981 8466 2.426738 TCTGAGCTGGTGTTTTTGGTTG 59.573 45.455 0.00 0.00 0.00 3.77
1982 8467 1.480137 TGAGCTGGTGTTTTTGGTTGG 59.520 47.619 0.00 0.00 0.00 3.77
1983 8468 1.480545 GAGCTGGTGTTTTTGGTTGGT 59.519 47.619 0.00 0.00 0.00 3.67
1984 8469 2.691011 GAGCTGGTGTTTTTGGTTGGTA 59.309 45.455 0.00 0.00 0.00 3.25
1985 8470 2.429250 AGCTGGTGTTTTTGGTTGGTAC 59.571 45.455 0.00 0.00 0.00 3.34
1986 8471 2.429250 GCTGGTGTTTTTGGTTGGTACT 59.571 45.455 0.00 0.00 0.00 2.73
1989 8474 3.195825 TGGTGTTTTTGGTTGGTACTTGG 59.804 43.478 0.00 0.00 0.00 3.61
1998 8483 3.195825 TGGTTGGTACTTGGTGTTTTTGG 59.804 43.478 0.00 0.00 0.00 3.28
2025 8510 8.413309 TGGTACTTCTTAGACAAAGCTACTTA 57.587 34.615 0.00 0.00 34.97 2.24
2143 8629 4.695606 ACTAAAGGGGACACTAGGAATGA 58.304 43.478 0.00 0.00 0.00 2.57
2148 8634 3.970640 AGGGGACACTAGGAATGAAGATC 59.029 47.826 0.00 0.00 0.00 2.75
2252 8738 3.117131 GGGTGGATTTGTCCCCAGATAAT 60.117 47.826 0.00 0.00 37.09 1.28
2300 8786 4.578928 GTGCAAGGAGTTTTAGGTCTTTCA 59.421 41.667 0.00 0.00 0.00 2.69
2360 8846 3.378512 ACTTGATCCAGCAGAGGTATGA 58.621 45.455 0.00 0.00 0.00 2.15
2376 8862 5.930135 AGGTATGACCATCACCATCTTTAC 58.070 41.667 0.00 0.00 41.95 2.01
2399 8997 4.436584 CCAGATGCTCTTTTTCTGCTAACG 60.437 45.833 0.00 0.00 36.41 3.18
2407 9005 6.910972 GCTCTTTTTCTGCTAACGTTTTAAGT 59.089 34.615 5.91 0.00 0.00 2.24
2565 9163 4.159693 TCTCGTTCCTGCAGCTCTTTTATA 59.840 41.667 8.66 0.00 0.00 0.98
2569 9167 5.065218 CGTTCCTGCAGCTCTTTTATATTGT 59.935 40.000 8.66 0.00 0.00 2.71
2572 9170 6.649155 TCCTGCAGCTCTTTTATATTGTACA 58.351 36.000 8.66 0.00 0.00 2.90
2573 9171 6.538742 TCCTGCAGCTCTTTTATATTGTACAC 59.461 38.462 8.66 0.00 0.00 2.90
2635 9234 1.555533 GATTCCGTCCCTCTCTTTGGT 59.444 52.381 0.00 0.00 0.00 3.67
2798 9723 7.639039 TGTTGTAAGTGAGCAGAAAAAGTATG 58.361 34.615 0.00 0.00 0.00 2.39
2799 9724 7.282224 TGTTGTAAGTGAGCAGAAAAAGTATGT 59.718 33.333 0.00 0.00 0.00 2.29
2857 9784 7.710907 TCATCAATTATGCTGGTGTAGTAGTTC 59.289 37.037 0.00 0.00 35.38 3.01
2858 9785 7.182817 TCAATTATGCTGGTGTAGTAGTTCT 57.817 36.000 0.00 0.00 0.00 3.01
2859 9786 7.265673 TCAATTATGCTGGTGTAGTAGTTCTC 58.734 38.462 0.00 0.00 0.00 2.87
2860 9787 3.784701 ATGCTGGTGTAGTAGTTCTCG 57.215 47.619 0.00 0.00 0.00 4.04
2861 9788 2.786777 TGCTGGTGTAGTAGTTCTCGA 58.213 47.619 0.00 0.00 0.00 4.04
2862 9789 3.151554 TGCTGGTGTAGTAGTTCTCGAA 58.848 45.455 0.00 0.00 0.00 3.71
2863 9790 3.570975 TGCTGGTGTAGTAGTTCTCGAAA 59.429 43.478 0.00 0.00 0.00 3.46
2864 9791 4.219944 TGCTGGTGTAGTAGTTCTCGAAAT 59.780 41.667 0.00 0.00 0.00 2.17
2865 9792 5.416639 TGCTGGTGTAGTAGTTCTCGAAATA 59.583 40.000 0.00 0.00 0.00 1.40
2866 9793 5.972382 GCTGGTGTAGTAGTTCTCGAAATAG 59.028 44.000 0.00 0.00 0.00 1.73
2867 9794 6.446781 TGGTGTAGTAGTTCTCGAAATAGG 57.553 41.667 0.00 0.00 0.00 2.57
2868 9795 5.163581 TGGTGTAGTAGTTCTCGAAATAGGC 60.164 44.000 0.00 0.00 0.00 3.93
2869 9796 5.067544 GGTGTAGTAGTTCTCGAAATAGGCT 59.932 44.000 0.00 0.00 0.00 4.58
2870 9797 6.405619 GGTGTAGTAGTTCTCGAAATAGGCTT 60.406 42.308 0.00 0.00 0.00 4.35
2871 9798 7.034397 GTGTAGTAGTTCTCGAAATAGGCTTT 58.966 38.462 0.00 0.00 0.00 3.51
2872 9799 7.220491 GTGTAGTAGTTCTCGAAATAGGCTTTC 59.780 40.741 0.00 0.00 0.00 2.62
2873 9800 6.282199 AGTAGTTCTCGAAATAGGCTTTCA 57.718 37.500 0.00 0.00 0.00 2.69
2874 9801 6.100668 AGTAGTTCTCGAAATAGGCTTTCAC 58.899 40.000 0.00 0.00 0.00 3.18
2875 9802 4.254492 AGTTCTCGAAATAGGCTTTCACC 58.746 43.478 0.00 0.00 0.00 4.02
2876 9803 3.261981 TCTCGAAATAGGCTTTCACCC 57.738 47.619 0.00 0.00 0.00 4.61
2877 9804 2.838202 TCTCGAAATAGGCTTTCACCCT 59.162 45.455 0.00 0.00 36.47 4.34
2878 9805 2.939103 CTCGAAATAGGCTTTCACCCTG 59.061 50.000 0.00 0.00 33.88 4.45
2879 9806 1.401905 CGAAATAGGCTTTCACCCTGC 59.598 52.381 0.00 0.00 33.88 4.85
2880 9807 2.728007 GAAATAGGCTTTCACCCTGCT 58.272 47.619 0.00 0.00 33.88 4.24
2881 9808 2.907458 AATAGGCTTTCACCCTGCTT 57.093 45.000 0.00 0.00 33.88 3.91
2882 9809 2.907458 ATAGGCTTTCACCCTGCTTT 57.093 45.000 0.00 0.00 33.88 3.51
2883 9810 4.316025 AATAGGCTTTCACCCTGCTTTA 57.684 40.909 0.00 0.00 33.88 1.85
2884 9811 2.907458 AGGCTTTCACCCTGCTTTAT 57.093 45.000 0.00 0.00 0.00 1.40
2885 9812 5.646692 ATAGGCTTTCACCCTGCTTTATA 57.353 39.130 0.00 0.00 33.88 0.98
2886 9813 4.316025 AGGCTTTCACCCTGCTTTATAA 57.684 40.909 0.00 0.00 0.00 0.98
2887 9814 4.672899 AGGCTTTCACCCTGCTTTATAAA 58.327 39.130 0.00 0.00 0.00 1.40
2888 9815 5.272402 AGGCTTTCACCCTGCTTTATAAAT 58.728 37.500 0.00 0.00 0.00 1.40
2889 9816 6.431722 AGGCTTTCACCCTGCTTTATAAATA 58.568 36.000 0.00 0.00 0.00 1.40
2890 9817 6.895204 AGGCTTTCACCCTGCTTTATAAATAA 59.105 34.615 0.00 0.00 0.00 1.40
2891 9818 7.398904 AGGCTTTCACCCTGCTTTATAAATAAA 59.601 33.333 0.00 0.00 0.00 1.40
2910 9837 2.344535 GCAAACATCCTGCTGGTGT 58.655 52.632 9.73 10.23 36.84 4.16
2911 9838 1.533625 GCAAACATCCTGCTGGTGTA 58.466 50.000 9.73 0.00 36.84 2.90
2912 9839 1.470098 GCAAACATCCTGCTGGTGTAG 59.530 52.381 9.73 10.15 36.84 2.74
2913 9840 2.783135 CAAACATCCTGCTGGTGTAGT 58.217 47.619 9.73 1.87 30.99 2.73
2914 9841 3.868369 GCAAACATCCTGCTGGTGTAGTA 60.868 47.826 9.73 0.00 36.84 1.82
2915 9842 3.895232 AACATCCTGCTGGTGTAGTAG 57.105 47.619 9.73 0.00 38.69 2.57
2916 9843 2.821437 ACATCCTGCTGGTGTAGTAGT 58.179 47.619 9.73 0.00 37.42 2.73
2917 9844 3.173965 ACATCCTGCTGGTGTAGTAGTT 58.826 45.455 9.73 0.00 37.42 2.24
2925 9852 6.404513 CCTGCTGGTGTAGTAGTTAGTTACTC 60.405 46.154 0.51 0.00 37.42 2.59
2947 9874 7.707104 ACTCAGTTTTGTTTAATCCTTGACAG 58.293 34.615 0.00 0.00 0.00 3.51
2948 9875 7.339466 ACTCAGTTTTGTTTAATCCTTGACAGT 59.661 33.333 0.00 0.00 0.00 3.55
2969 9896 9.897744 GACAGTTTGACATTCAGAAAATGATAA 57.102 29.630 4.86 0.00 37.89 1.75
2981 9908 7.704727 TCAGAAAATGATAAACCCCTTTAGGA 58.295 34.615 0.00 0.00 32.04 2.94
2993 9920 2.758979 CCCTTTAGGAGTACAGCTCGAA 59.241 50.000 0.00 0.00 45.03 3.71
3043 9970 6.705381 TCCAATGCTTTTACTGTTTCAAATGG 59.295 34.615 0.00 0.00 0.00 3.16
3045 9972 7.095523 CCAATGCTTTTACTGTTTCAAATGGAG 60.096 37.037 0.00 0.00 0.00 3.86
3048 9975 5.175673 GCTTTTACTGTTTCAAATGGAGCAC 59.824 40.000 0.00 0.00 0.00 4.40
3087 10015 2.041216 GTTAGGTTTGGTCATCCCCTGT 59.959 50.000 0.00 0.00 0.00 4.00
3159 11001 7.934855 AGGATTATGTAATTCATGATGCTCC 57.065 36.000 0.00 0.00 43.67 4.70
3177 11019 7.498900 TGATGCTCCGAATATATTTTGAACTGT 59.501 33.333 0.00 0.00 0.00 3.55
3219 11061 9.327628 GAGCTCAACATAGATCATATATGCAAT 57.672 33.333 9.40 0.00 34.59 3.56
3220 11062 9.682465 AGCTCAACATAGATCATATATGCAATT 57.318 29.630 7.92 0.00 34.59 2.32
3397 11249 8.194433 TGTCAAGATACTAGTGTTAGTACTCG 57.806 38.462 5.39 0.00 43.31 4.18
3411 11263 8.052490 GTGTTAGTACTCGTAGTTTGTTTTGTC 58.948 37.037 0.00 0.00 0.00 3.18
3418 11270 7.121272 ACTCGTAGTTTGTTTTGTCATTAACG 58.879 34.615 0.00 0.00 0.00 3.18
3419 11271 7.010367 ACTCGTAGTTTGTTTTGTCATTAACGA 59.990 33.333 0.00 0.00 33.91 3.85
3420 11272 7.339207 TCGTAGTTTGTTTTGTCATTAACGAG 58.661 34.615 0.00 0.00 31.64 4.18
3421 11273 7.222417 TCGTAGTTTGTTTTGTCATTAACGAGA 59.778 33.333 0.00 0.00 31.64 4.04
3422 11274 7.847078 CGTAGTTTGTTTTGTCATTAACGAGAA 59.153 33.333 0.00 0.00 0.00 2.87
3465 11317 6.655003 GGTTGATTCTATGGTTGTTGAGAGAA 59.345 38.462 0.00 0.00 0.00 2.87
3521 11373 1.349026 CAGTCACTGTGTTGGGGATCT 59.651 52.381 7.79 0.00 0.00 2.75
3600 11452 1.269723 GTGTAAGGTTTGCTCCTTGGC 59.730 52.381 15.10 10.05 45.96 4.52
3603 11455 4.404654 GGTTTGCTCCTTGGCGCG 62.405 66.667 0.00 0.00 34.52 6.86
3644 11504 7.437748 AGCTAATGACACCTCTCATATTACAC 58.562 38.462 0.00 0.00 30.27 2.90
3693 11554 4.642437 TGCAGATTTGTCTTTGGTGTTACA 59.358 37.500 0.00 0.00 0.00 2.41
3742 11603 5.748152 GCTGTTGCAGTTCTTGTAAATGAAA 59.252 36.000 0.00 0.00 39.41 2.69
3754 11615 5.440234 TGTAAATGAAAAGCGTTTGCCTA 57.560 34.783 1.24 0.00 44.31 3.93
3787 11648 5.007626 CGTTCCATCTCACTTTCAAGTTCAA 59.992 40.000 0.00 0.00 37.08 2.69
3789 11650 5.065914 TCCATCTCACTTTCAAGTTCAAGG 58.934 41.667 0.00 0.00 37.08 3.61
3888 11749 3.119531 TGTTCATATTCCTTTGGCAAGCG 60.120 43.478 0.00 0.00 0.00 4.68
4005 11897 7.291182 AGACCTGGCTCTATATTCTGTAAACAT 59.709 37.037 0.00 0.00 0.00 2.71
4055 11947 8.758633 TGAAGTTTCTAAGATGCTAGTGTTAC 57.241 34.615 0.00 0.00 0.00 2.50
4361 12997 0.108898 CACAGGTCCTCTTCTCTGCG 60.109 60.000 0.00 0.00 0.00 5.18
4561 13240 8.064222 CACTATTGCAATGATTAGTTAACTCGG 58.936 37.037 22.27 0.35 0.00 4.63
4568 13247 5.841957 TGATTAGTTAACTCGGGGACTAC 57.158 43.478 12.39 0.00 0.00 2.73
4570 13249 0.813821 AGTTAACTCGGGGACTACGC 59.186 55.000 1.12 0.00 0.00 4.42
4598 13333 6.465948 TGCATTTGCTCCTTTTCACATTTAT 58.534 32.000 3.94 0.00 42.66 1.40
4599 13334 6.369340 TGCATTTGCTCCTTTTCACATTTATG 59.631 34.615 3.94 0.00 42.66 1.90
4617 13352 9.155975 ACATTTATGATTACACTCTTCTGACAC 57.844 33.333 0.00 0.00 0.00 3.67
4718 13453 1.880027 GGAGTGGAAGCGACATTGTTT 59.120 47.619 0.00 0.00 0.00 2.83
4743 13478 3.569277 CACACTGATGTCCATTTCCAACA 59.431 43.478 0.00 0.00 36.72 3.33
4793 13528 1.206371 GCGGGCCTAACTCAGTTTCTA 59.794 52.381 0.84 0.00 0.00 2.10
4796 13531 3.105283 GGGCCTAACTCAGTTTCTAGGA 58.895 50.000 8.82 0.00 0.00 2.94
4880 13615 2.040278 CCTCTGCCTCTCCTGGGT 59.960 66.667 0.00 0.00 0.00 4.51
4928 13663 4.173256 CCGATAATGGGCAAACAAAAGTC 58.827 43.478 0.00 0.00 0.00 3.01
4939 13674 6.589907 GGGCAAACAAAAGTCGATTGAAATAT 59.410 34.615 4.32 0.00 0.00 1.28
4940 13675 7.117667 GGGCAAACAAAAGTCGATTGAAATATT 59.882 33.333 4.32 0.00 0.00 1.28
5008 13743 0.741221 GTGAACTCGATCACCAGGGC 60.741 60.000 7.77 0.00 43.11 5.19
5015 13750 3.432051 GATCACCAGGGCGAGACGG 62.432 68.421 0.00 0.00 0.00 4.79
5046 13782 1.540797 GCAGAGATGTCAGATCCTGGC 60.541 57.143 0.00 0.00 36.52 4.85
5054 13790 0.532573 TCAGATCCTGGCGTGAACTC 59.467 55.000 0.00 0.00 31.51 3.01
5058 13794 0.103208 ATCCTGGCGTGAACTCGATC 59.897 55.000 0.57 0.00 0.00 3.69
5078 13814 1.142748 CCAGGGCAGACGAGATGAC 59.857 63.158 0.00 0.00 0.00 3.06
5163 13899 1.072965 CCCAGCAGAAGGTGAAGTTCT 59.927 52.381 4.17 0.00 45.95 3.01
5206 13944 6.037281 GCTGCTCTTACCTGTAATAAAACTCC 59.963 42.308 0.00 0.00 0.00 3.85
5245 13991 7.774625 TCAAGATTCATGGTAATCTACATGCAA 59.225 33.333 9.41 0.00 43.75 4.08
5246 13992 8.407832 CAAGATTCATGGTAATCTACATGCAAA 58.592 33.333 9.41 0.00 43.75 3.68
5283 14031 1.743996 GGCTGGGAAGAAGATGTGTC 58.256 55.000 0.00 0.00 0.00 3.67
5303 14051 1.464608 CGTCTTGCATCACCGTTGATT 59.535 47.619 0.00 0.00 40.79 2.57
5311 14059 3.588955 CATCACCGTTGATTCTCTGACA 58.411 45.455 0.00 0.00 40.79 3.58
5334 14082 9.486857 GACATCTTTCTTAGGTAAATTAAACGC 57.513 33.333 0.00 0.00 0.00 4.84
5355 14104 2.186076 GGTAGATGAACGCGAAGACTG 58.814 52.381 15.93 0.00 0.00 3.51
5701 14658 6.275494 ACAATCTGATCAATGCACAAATGA 57.725 33.333 0.00 0.00 0.00 2.57
5767 14724 0.322726 TCCCGTGTACGACATGAGGA 60.323 55.000 5.91 0.03 43.02 3.71
5771 14728 2.159296 CCGTGTACGACATGAGGATTGA 60.159 50.000 5.91 0.00 43.02 2.57
5790 14747 1.378514 CCTACGGGCATGCACCTTT 60.379 57.895 21.36 4.15 0.00 3.11
5816 14773 8.410673 ACCTTAATTCTTCTTTCTTTCTTCCC 57.589 34.615 0.00 0.00 0.00 3.97
5824 14781 6.500049 TCTTCTTTCTTTCTTCCCTGATCTCT 59.500 38.462 0.00 0.00 0.00 3.10
5862 14819 1.280982 CGCTTTTATCGCTGCTCTCA 58.719 50.000 0.00 0.00 0.00 3.27
6097 15054 1.837439 CTTGTAGACATGCCCCTACCA 59.163 52.381 14.21 6.25 35.57 3.25
6110 15067 3.809905 CCCCTACCAGCTAGATTTGAAC 58.190 50.000 0.00 0.00 0.00 3.18
6111 15068 3.458189 CCCTACCAGCTAGATTTGAACG 58.542 50.000 0.00 0.00 0.00 3.95
6194 15151 8.957466 AGACTTAAATAAGGTTCAAGGCATAAC 58.043 33.333 5.27 0.00 37.62 1.89
6203 15160 5.772672 AGGTTCAAGGCATAACAATGTAACA 59.227 36.000 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.265454 CCGGTTCCTCAGTTAGGCCT 61.265 60.000 11.78 11.78 46.10 5.19
591 5788 5.862860 CGATCCACAGATATGTCTTCATGAG 59.137 44.000 0.00 0.00 35.70 2.90
629 6032 1.275856 TCATGCCCAACAATGAAAGCC 59.724 47.619 0.00 0.00 0.00 4.35
778 7181 2.698438 TGGTTTCCCCCGGTATTTTT 57.302 45.000 0.00 0.00 0.00 1.94
779 7182 2.698438 TTGGTTTCCCCCGGTATTTT 57.302 45.000 0.00 0.00 0.00 1.82
780 7183 2.624822 GGATTGGTTTCCCCCGGTATTT 60.625 50.000 0.00 0.00 0.00 1.40
781 7184 1.063492 GGATTGGTTTCCCCCGGTATT 60.063 52.381 0.00 0.00 0.00 1.89
782 7185 0.554305 GGATTGGTTTCCCCCGGTAT 59.446 55.000 0.00 0.00 0.00 2.73
783 7186 0.845543 TGGATTGGTTTCCCCCGGTA 60.846 55.000 0.00 0.00 34.67 4.02
784 7187 1.731324 TTGGATTGGTTTCCCCCGGT 61.731 55.000 0.00 0.00 34.67 5.28
785 7188 0.325203 ATTGGATTGGTTTCCCCCGG 60.325 55.000 0.00 0.00 34.67 5.73
786 7189 0.823460 CATTGGATTGGTTTCCCCCG 59.177 55.000 0.00 0.00 34.67 5.73
787 7190 2.246091 TCATTGGATTGGTTTCCCCC 57.754 50.000 0.00 0.00 34.67 5.40
788 7191 3.774216 TCATTCATTGGATTGGTTTCCCC 59.226 43.478 0.00 0.00 34.67 4.81
789 7192 5.178061 GTTCATTCATTGGATTGGTTTCCC 58.822 41.667 0.00 0.00 34.67 3.97
790 7193 4.864247 CGTTCATTCATTGGATTGGTTTCC 59.136 41.667 0.00 0.00 36.24 3.13
791 7194 4.327087 GCGTTCATTCATTGGATTGGTTTC 59.673 41.667 0.00 0.00 0.00 2.78
792 7195 4.244862 GCGTTCATTCATTGGATTGGTTT 58.755 39.130 0.00 0.00 0.00 3.27
793 7196 3.257873 TGCGTTCATTCATTGGATTGGTT 59.742 39.130 0.00 0.00 0.00 3.67
794 7197 2.824936 TGCGTTCATTCATTGGATTGGT 59.175 40.909 0.00 0.00 0.00 3.67
795 7198 3.441163 CTGCGTTCATTCATTGGATTGG 58.559 45.455 0.00 0.00 0.00 3.16
796 7199 2.855963 GCTGCGTTCATTCATTGGATTG 59.144 45.455 0.00 0.00 0.00 2.67
797 7200 2.478370 CGCTGCGTTCATTCATTGGATT 60.478 45.455 14.93 0.00 0.00 3.01
798 7201 1.064505 CGCTGCGTTCATTCATTGGAT 59.935 47.619 14.93 0.00 0.00 3.41
799 7202 0.447406 CGCTGCGTTCATTCATTGGA 59.553 50.000 14.93 0.00 0.00 3.53
800 7203 0.447406 TCGCTGCGTTCATTCATTGG 59.553 50.000 22.48 0.00 0.00 3.16
801 7204 1.906966 GTTCGCTGCGTTCATTCATTG 59.093 47.619 22.48 0.00 0.00 2.82
802 7205 1.464023 CGTTCGCTGCGTTCATTCATT 60.464 47.619 22.48 0.00 0.00 2.57
803 7206 0.095245 CGTTCGCTGCGTTCATTCAT 59.905 50.000 22.48 0.00 0.00 2.57
804 7207 1.491127 CGTTCGCTGCGTTCATTCA 59.509 52.632 22.48 0.00 0.00 2.57
805 7208 1.859135 GCGTTCGCTGCGTTCATTC 60.859 57.895 22.48 4.19 0.00 2.67
806 7209 2.111932 TTGCGTTCGCTGCGTTCATT 62.112 50.000 22.48 0.00 34.24 2.57
807 7210 1.911293 ATTGCGTTCGCTGCGTTCAT 61.911 50.000 22.48 4.25 34.24 2.57
808 7211 2.111932 AATTGCGTTCGCTGCGTTCA 62.112 50.000 22.48 12.21 34.24 3.18
809 7212 1.440353 AATTGCGTTCGCTGCGTTC 60.440 52.632 22.48 14.41 34.24 3.95
810 7213 1.725625 CAATTGCGTTCGCTGCGTT 60.726 52.632 22.48 3.84 34.24 4.84
811 7214 2.127270 CAATTGCGTTCGCTGCGT 60.127 55.556 22.48 0.00 34.24 5.24
812 7215 2.778551 TTCCAATTGCGTTCGCTGCG 62.779 55.000 17.25 17.25 34.24 5.18
813 7216 0.456653 ATTCCAATTGCGTTCGCTGC 60.457 50.000 17.63 0.00 0.00 5.25
814 7217 1.538276 GATTCCAATTGCGTTCGCTG 58.462 50.000 17.63 8.12 0.00 5.18
815 7218 0.451783 GGATTCCAATTGCGTTCGCT 59.548 50.000 17.63 0.00 0.00 4.93
816 7219 0.170116 TGGATTCCAATTGCGTTCGC 59.830 50.000 1.94 10.34 0.00 4.70
817 7220 1.795162 GCTGGATTCCAATTGCGTTCG 60.795 52.381 6.88 0.00 30.80 3.95
818 7221 1.795162 CGCTGGATTCCAATTGCGTTC 60.795 52.381 22.73 0.00 38.81 3.95
819 7222 0.171007 CGCTGGATTCCAATTGCGTT 59.829 50.000 22.73 0.00 38.81 4.84
820 7223 0.676466 TCGCTGGATTCCAATTGCGT 60.676 50.000 27.05 0.00 43.23 5.24
821 7224 0.451383 TTCGCTGGATTCCAATTGCG 59.549 50.000 24.24 24.24 43.95 4.85
822 7225 1.795162 CGTTCGCTGGATTCCAATTGC 60.795 52.381 6.88 6.12 30.80 3.56
823 7226 1.737236 TCGTTCGCTGGATTCCAATTG 59.263 47.619 6.88 0.00 30.80 2.32
824 7227 2.107950 TCGTTCGCTGGATTCCAATT 57.892 45.000 6.88 0.00 30.80 2.32
825 7228 2.009774 CTTCGTTCGCTGGATTCCAAT 58.990 47.619 6.88 0.00 30.80 3.16
826 7229 1.001520 TCTTCGTTCGCTGGATTCCAA 59.998 47.619 6.88 0.00 30.80 3.53
827 7230 0.606096 TCTTCGTTCGCTGGATTCCA 59.394 50.000 5.05 5.05 0.00 3.53
828 7231 1.722011 TTCTTCGTTCGCTGGATTCC 58.278 50.000 0.00 0.00 0.00 3.01
829 7232 3.059188 TGTTTTCTTCGTTCGCTGGATTC 60.059 43.478 0.00 0.00 0.00 2.52
830 7233 2.875933 TGTTTTCTTCGTTCGCTGGATT 59.124 40.909 0.00 0.00 0.00 3.01
831 7234 2.480419 CTGTTTTCTTCGTTCGCTGGAT 59.520 45.455 0.00 0.00 0.00 3.41
832 7235 1.864711 CTGTTTTCTTCGTTCGCTGGA 59.135 47.619 0.00 0.00 0.00 3.86
833 7236 1.597663 ACTGTTTTCTTCGTTCGCTGG 59.402 47.619 0.00 0.00 0.00 4.85
834 7237 2.284150 TCACTGTTTTCTTCGTTCGCTG 59.716 45.455 0.00 0.00 0.00 5.18
835 7238 2.546778 TCACTGTTTTCTTCGTTCGCT 58.453 42.857 0.00 0.00 0.00 4.93
836 7239 3.313274 TTCACTGTTTTCTTCGTTCGC 57.687 42.857 0.00 0.00 0.00 4.70
837 7240 6.516355 CACATATTCACTGTTTTCTTCGTTCG 59.484 38.462 0.00 0.00 0.00 3.95
838 7241 6.303259 GCACATATTCACTGTTTTCTTCGTTC 59.697 38.462 0.00 0.00 0.00 3.95
839 7242 6.017109 AGCACATATTCACTGTTTTCTTCGTT 60.017 34.615 0.00 0.00 0.00 3.85
840 7243 5.470098 AGCACATATTCACTGTTTTCTTCGT 59.530 36.000 0.00 0.00 0.00 3.85
841 7244 5.791974 CAGCACATATTCACTGTTTTCTTCG 59.208 40.000 0.00 0.00 0.00 3.79
842 7245 6.088824 CCAGCACATATTCACTGTTTTCTTC 58.911 40.000 0.00 0.00 0.00 2.87
843 7246 5.565439 GCCAGCACATATTCACTGTTTTCTT 60.565 40.000 0.00 0.00 0.00 2.52
844 7247 4.082571 GCCAGCACATATTCACTGTTTTCT 60.083 41.667 0.00 0.00 0.00 2.52
845 7248 4.168760 GCCAGCACATATTCACTGTTTTC 58.831 43.478 0.00 0.00 0.00 2.29
846 7249 3.056607 GGCCAGCACATATTCACTGTTTT 60.057 43.478 0.00 0.00 0.00 2.43
847 7250 2.493278 GGCCAGCACATATTCACTGTTT 59.507 45.455 0.00 0.00 0.00 2.83
848 7251 2.094675 GGCCAGCACATATTCACTGTT 58.905 47.619 0.00 0.00 0.00 3.16
849 7252 1.683011 GGGCCAGCACATATTCACTGT 60.683 52.381 4.39 0.00 0.00 3.55
850 7253 1.027357 GGGCCAGCACATATTCACTG 58.973 55.000 4.39 0.00 0.00 3.66
851 7254 0.625316 TGGGCCAGCACATATTCACT 59.375 50.000 0.00 0.00 0.00 3.41
852 7255 1.027357 CTGGGCCAGCACATATTCAC 58.973 55.000 22.68 0.00 0.00 3.18
853 7256 0.625316 ACTGGGCCAGCACATATTCA 59.375 50.000 33.04 0.00 34.37 2.57
854 7257 1.027357 CACTGGGCCAGCACATATTC 58.973 55.000 33.04 0.00 34.37 1.75
855 7258 1.039233 GCACTGGGCCAGCACATATT 61.039 55.000 33.04 9.26 34.37 1.28
856 7259 1.454479 GCACTGGGCCAGCACATAT 60.454 57.895 33.04 10.08 34.37 1.78
857 7260 2.045045 GCACTGGGCCAGCACATA 60.045 61.111 33.04 0.00 34.37 2.29
874 7277 2.466724 AGGATTTCCTCCCACCTGTGG 61.467 57.143 9.42 9.42 44.77 4.17
875 7278 0.995024 AGGATTTCCTCCCACCTGTG 59.005 55.000 0.00 0.00 44.77 3.66
876 7279 3.521085 AGGATTTCCTCCCACCTGT 57.479 52.632 0.00 0.00 44.77 4.00
886 7289 1.281899 CGTCTCGCTGAAGGATTTCC 58.718 55.000 0.00 0.00 32.09 3.13
887 7290 1.281899 CCGTCTCGCTGAAGGATTTC 58.718 55.000 4.74 0.00 45.40 2.17
888 7291 0.108138 CCCGTCTCGCTGAAGGATTT 60.108 55.000 10.60 0.00 45.40 2.17
889 7292 0.970937 TCCCGTCTCGCTGAAGGATT 60.971 55.000 10.60 0.00 45.40 3.01
890 7293 1.379977 TCCCGTCTCGCTGAAGGAT 60.380 57.895 10.60 0.00 45.40 3.24
891 7294 2.035155 TCCCGTCTCGCTGAAGGA 59.965 61.111 10.60 3.87 45.40 3.36
892 7295 2.182030 GTCCCGTCTCGCTGAAGG 59.818 66.667 3.95 3.95 42.78 3.46
893 7296 2.196382 TTCGTCCCGTCTCGCTGAAG 62.196 60.000 0.00 0.00 0.00 3.02
894 7297 2.263021 TTCGTCCCGTCTCGCTGAA 61.263 57.895 0.00 0.00 0.00 3.02
895 7298 2.670592 TTCGTCCCGTCTCGCTGA 60.671 61.111 0.00 0.00 0.00 4.26
896 7299 2.504244 GTTCGTCCCGTCTCGCTG 60.504 66.667 0.00 0.00 0.00 5.18
897 7300 2.981909 TGTTCGTCCCGTCTCGCT 60.982 61.111 0.00 0.00 0.00 4.93
898 7301 2.804090 GTGTTCGTCCCGTCTCGC 60.804 66.667 0.00 0.00 0.00 5.03
899 7302 1.154263 GAGTGTTCGTCCCGTCTCG 60.154 63.158 0.00 0.00 0.00 4.04
900 7303 0.386985 GTGAGTGTTCGTCCCGTCTC 60.387 60.000 0.00 0.00 0.00 3.36
901 7304 1.658673 GTGAGTGTTCGTCCCGTCT 59.341 57.895 0.00 0.00 0.00 4.18
902 7305 1.728426 CGTGAGTGTTCGTCCCGTC 60.728 63.158 0.00 0.00 0.00 4.79
903 7306 2.333938 CGTGAGTGTTCGTCCCGT 59.666 61.111 0.00 0.00 0.00 5.28
904 7307 2.333938 ACGTGAGTGTTCGTCCCG 59.666 61.111 0.00 0.00 46.97 5.14
915 7318 5.551760 AAATTTATCCTGCTTCACGTGAG 57.448 39.130 19.11 13.67 0.00 3.51
916 7319 4.092821 CGAAATTTATCCTGCTTCACGTGA 59.907 41.667 15.76 15.76 0.00 4.35
917 7320 4.142902 ACGAAATTTATCCTGCTTCACGTG 60.143 41.667 9.94 9.94 0.00 4.49
918 7321 4.000988 ACGAAATTTATCCTGCTTCACGT 58.999 39.130 0.00 0.00 0.00 4.49
919 7322 4.334443 CACGAAATTTATCCTGCTTCACG 58.666 43.478 0.00 0.00 0.00 4.35
920 7323 4.098416 GCACGAAATTTATCCTGCTTCAC 58.902 43.478 0.00 0.00 31.33 3.18
921 7324 3.128589 GGCACGAAATTTATCCTGCTTCA 59.871 43.478 0.00 0.00 33.55 3.02
922 7325 3.128589 TGGCACGAAATTTATCCTGCTTC 59.871 43.478 0.00 0.00 33.55 3.86
923 7326 3.088532 TGGCACGAAATTTATCCTGCTT 58.911 40.909 0.00 0.00 33.55 3.91
924 7327 2.722094 TGGCACGAAATTTATCCTGCT 58.278 42.857 0.00 0.00 33.55 4.24
925 7328 3.438360 CTTGGCACGAAATTTATCCTGC 58.562 45.455 0.00 0.00 32.65 4.85
926 7329 3.734902 GCCTTGGCACGAAATTTATCCTG 60.735 47.826 6.79 0.00 0.00 3.86
927 7330 2.427095 GCCTTGGCACGAAATTTATCCT 59.573 45.455 6.79 0.00 0.00 3.24
928 7331 2.481276 GGCCTTGGCACGAAATTTATCC 60.481 50.000 14.04 0.00 0.00 2.59
929 7332 2.481276 GGGCCTTGGCACGAAATTTATC 60.481 50.000 14.04 0.00 0.00 1.75
930 7333 1.480545 GGGCCTTGGCACGAAATTTAT 59.519 47.619 14.04 0.00 0.00 1.40
931 7334 0.892063 GGGCCTTGGCACGAAATTTA 59.108 50.000 14.04 0.00 0.00 1.40
932 7335 1.118356 TGGGCCTTGGCACGAAATTT 61.118 50.000 14.04 0.00 0.00 1.82
933 7336 1.118356 TTGGGCCTTGGCACGAAATT 61.118 50.000 14.04 0.00 0.00 1.82
934 7337 1.532794 TTGGGCCTTGGCACGAAAT 60.533 52.632 14.04 0.00 0.00 2.17
935 7338 2.123683 TTGGGCCTTGGCACGAAA 60.124 55.556 14.04 0.00 0.00 3.46
936 7339 2.597217 CTTGGGCCTTGGCACGAA 60.597 61.111 14.04 6.33 0.00 3.85
937 7340 3.565214 TCTTGGGCCTTGGCACGA 61.565 61.111 14.04 8.87 0.00 4.35
938 7341 3.365265 GTCTTGGGCCTTGGCACG 61.365 66.667 14.04 0.00 0.00 5.34
939 7342 2.991540 GGTCTTGGGCCTTGGCAC 60.992 66.667 14.04 10.74 0.00 5.01
940 7343 2.855770 ATGGTCTTGGGCCTTGGCA 61.856 57.895 14.04 0.00 0.00 4.92
941 7344 2.037847 ATGGTCTTGGGCCTTGGC 59.962 61.111 4.53 2.49 0.00 4.52
942 7345 0.967380 GTCATGGTCTTGGGCCTTGG 60.967 60.000 4.53 0.00 33.52 3.61
943 7346 1.308069 CGTCATGGTCTTGGGCCTTG 61.308 60.000 4.53 0.00 33.86 3.61
944 7347 1.002134 CGTCATGGTCTTGGGCCTT 60.002 57.895 4.53 0.00 0.00 4.35
945 7348 2.671070 CGTCATGGTCTTGGGCCT 59.329 61.111 4.53 0.00 0.00 5.19
946 7349 2.438434 CCGTCATGGTCTTGGGCC 60.438 66.667 0.00 0.00 0.00 5.80
947 7350 2.438434 CCCGTCATGGTCTTGGGC 60.438 66.667 0.00 0.00 35.15 5.36
948 7351 2.438434 GCCCGTCATGGTCTTGGG 60.438 66.667 0.00 0.00 43.02 4.12
949 7352 1.002134 AAGCCCGTCATGGTCTTGG 60.002 57.895 0.00 0.00 35.15 3.61
950 7353 0.321564 TCAAGCCCGTCATGGTCTTG 60.322 55.000 0.00 0.00 39.15 3.02
951 7354 0.036010 CTCAAGCCCGTCATGGTCTT 60.036 55.000 0.00 0.00 35.15 3.01
952 7355 1.599047 CTCAAGCCCGTCATGGTCT 59.401 57.895 0.00 0.00 35.15 3.85
953 7356 2.109126 GCTCAAGCCCGTCATGGTC 61.109 63.158 0.00 0.00 35.15 4.02
954 7357 2.045926 GCTCAAGCCCGTCATGGT 60.046 61.111 0.00 0.00 35.15 3.55
955 7358 3.197790 CGCTCAAGCCCGTCATGG 61.198 66.667 0.00 0.00 37.91 3.66
956 7359 3.197790 CCGCTCAAGCCCGTCATG 61.198 66.667 0.00 0.00 37.91 3.07
957 7360 4.473520 CCCGCTCAAGCCCGTCAT 62.474 66.667 0.00 0.00 37.91 3.06
982 7385 4.735132 TTGGACCGAAGCCGCTCG 62.735 66.667 0.00 0.00 38.58 5.03
983 7386 2.815647 CTTGGACCGAAGCCGCTC 60.816 66.667 0.00 0.00 0.00 5.03
984 7387 3.302347 CTCTTGGACCGAAGCCGCT 62.302 63.158 0.00 0.00 0.00 5.52
985 7388 2.815647 CTCTTGGACCGAAGCCGC 60.816 66.667 0.00 0.00 0.00 6.53
986 7389 1.153745 CTCTCTTGGACCGAAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
987 7390 0.174617 CTCTCTCTTGGACCGAAGCC 59.825 60.000 0.00 0.00 0.00 4.35
988 7391 1.134175 CTCTCTCTCTTGGACCGAAGC 59.866 57.143 0.00 0.00 0.00 3.86
989 7392 2.717390 TCTCTCTCTCTTGGACCGAAG 58.283 52.381 0.00 0.00 0.00 3.79
990 7393 2.881111 TCTCTCTCTCTTGGACCGAA 57.119 50.000 0.00 0.00 0.00 4.30
991 7394 2.619332 CCTTCTCTCTCTCTTGGACCGA 60.619 54.545 0.00 0.00 0.00 4.69
992 7395 1.748493 CCTTCTCTCTCTCTTGGACCG 59.252 57.143 0.00 0.00 0.00 4.79
993 7396 2.495669 CACCTTCTCTCTCTCTTGGACC 59.504 54.545 0.00 0.00 0.00 4.46
994 7397 3.426615 TCACCTTCTCTCTCTCTTGGAC 58.573 50.000 0.00 0.00 0.00 4.02
995 7398 3.332187 TCTCACCTTCTCTCTCTCTTGGA 59.668 47.826 0.00 0.00 0.00 3.53
996 7399 3.443681 GTCTCACCTTCTCTCTCTCTTGG 59.556 52.174 0.00 0.00 0.00 3.61
997 7400 4.078537 TGTCTCACCTTCTCTCTCTCTTG 58.921 47.826 0.00 0.00 0.00 3.02
998 7401 4.079253 GTGTCTCACCTTCTCTCTCTCTT 58.921 47.826 0.00 0.00 0.00 2.85
999 7402 3.686016 GTGTCTCACCTTCTCTCTCTCT 58.314 50.000 0.00 0.00 0.00 3.10
1031 7434 6.126911 ACAAGTCTCACCTTCTCTCTCTTTTT 60.127 38.462 0.00 0.00 0.00 1.94
1032 7435 5.365314 ACAAGTCTCACCTTCTCTCTCTTTT 59.635 40.000 0.00 0.00 0.00 2.27
1033 7436 4.898861 ACAAGTCTCACCTTCTCTCTCTTT 59.101 41.667 0.00 0.00 0.00 2.52
1034 7437 4.280677 CACAAGTCTCACCTTCTCTCTCTT 59.719 45.833 0.00 0.00 0.00 2.85
1079 7482 2.231540 CTCTCCCTCCTCCCGTTCCT 62.232 65.000 0.00 0.00 0.00 3.36
1080 7483 1.758906 CTCTCCCTCCTCCCGTTCC 60.759 68.421 0.00 0.00 0.00 3.62
1081 7484 0.324460 TTCTCTCCCTCCTCCCGTTC 60.324 60.000 0.00 0.00 0.00 3.95
1082 7485 0.116541 TTTCTCTCCCTCCTCCCGTT 59.883 55.000 0.00 0.00 0.00 4.44
1083 7486 0.324830 CTTTCTCTCCCTCCTCCCGT 60.325 60.000 0.00 0.00 0.00 5.28
1212 7641 1.375098 GGTACGAGGAGGACGAGGTG 61.375 65.000 0.00 0.00 33.31 4.00
1213 7642 1.077858 GGTACGAGGAGGACGAGGT 60.078 63.158 0.00 0.00 33.31 3.85
1214 7643 1.823041 GGGTACGAGGAGGACGAGG 60.823 68.421 0.00 0.00 33.31 4.63
1215 7644 1.077930 TGGGTACGAGGAGGACGAG 60.078 63.158 0.00 0.00 33.31 4.18
1216 7645 1.077930 CTGGGTACGAGGAGGACGA 60.078 63.158 0.00 0.00 33.31 4.20
1217 7646 1.378250 ACTGGGTACGAGGAGGACG 60.378 63.158 0.00 0.00 38.96 4.79
1218 7647 1.321074 CCACTGGGTACGAGGAGGAC 61.321 65.000 0.00 0.00 38.96 3.85
1219 7648 1.000019 CCACTGGGTACGAGGAGGA 60.000 63.158 0.00 0.00 38.96 3.71
1220 7649 2.722201 GCCACTGGGTACGAGGAGG 61.722 68.421 0.00 0.00 38.96 4.30
1221 7650 2.722201 GGCCACTGGGTACGAGGAG 61.722 68.421 0.00 0.00 38.96 3.69
1222 7651 2.682494 GGCCACTGGGTACGAGGA 60.682 66.667 0.00 0.00 38.96 3.71
1223 7652 4.143333 CGGCCACTGGGTACGAGG 62.143 72.222 2.24 0.00 38.96 4.63
1224 7653 4.814294 GCGGCCACTGGGTACGAG 62.814 72.222 2.24 0.00 41.04 4.18
1401 7830 4.436998 CTGTCCGTGGAGGCGACC 62.437 72.222 0.00 0.00 40.77 4.79
1411 7843 2.602568 ACCGGTTAGGCTGTCCGT 60.603 61.111 23.19 13.12 46.52 4.69
1456 7888 5.753438 TCGCGAAATATCTTGCAGATAACTT 59.247 36.000 6.20 6.71 40.28 2.66
1457 7890 5.289595 TCGCGAAATATCTTGCAGATAACT 58.710 37.500 6.20 1.97 40.28 2.24
1465 7898 1.933853 ACCACTCGCGAAATATCTTGC 59.066 47.619 11.33 0.00 0.00 4.01
1468 7901 2.930040 CACAACCACTCGCGAAATATCT 59.070 45.455 11.33 0.00 0.00 1.98
1469 7902 2.536928 GCACAACCACTCGCGAAATATC 60.537 50.000 11.33 0.00 0.00 1.63
1471 7904 0.793861 GCACAACCACTCGCGAAATA 59.206 50.000 11.33 0.00 0.00 1.40
1480 7913 1.525995 CCTCAACCGCACAACCACT 60.526 57.895 0.00 0.00 0.00 4.00
1485 7918 2.675844 CGAAATATCCTCAACCGCACAA 59.324 45.455 0.00 0.00 0.00 3.33
1487 7920 1.597663 CCGAAATATCCTCAACCGCAC 59.402 52.381 0.00 0.00 0.00 5.34
1490 7923 1.542547 CCCCCGAAATATCCTCAACCG 60.543 57.143 0.00 0.00 0.00 4.44
1500 7933 0.553113 AAACCCCCTCCCCCGAAATA 60.553 55.000 0.00 0.00 0.00 1.40
1527 7960 5.240844 CGTGGTTTTTCTTATCCCTCTTGTT 59.759 40.000 0.00 0.00 0.00 2.83
1528 7961 4.760204 CGTGGTTTTTCTTATCCCTCTTGT 59.240 41.667 0.00 0.00 0.00 3.16
1529 7962 4.379499 GCGTGGTTTTTCTTATCCCTCTTG 60.379 45.833 0.00 0.00 0.00 3.02
1530 7963 3.756963 GCGTGGTTTTTCTTATCCCTCTT 59.243 43.478 0.00 0.00 0.00 2.85
1537 7970 2.095415 GCTTCCGCGTGGTTTTTCTTAT 60.095 45.455 16.01 0.00 36.30 1.73
1538 7971 1.264826 GCTTCCGCGTGGTTTTTCTTA 59.735 47.619 16.01 0.00 36.30 2.10
1539 7972 0.030235 GCTTCCGCGTGGTTTTTCTT 59.970 50.000 16.01 0.00 36.30 2.52
1571 8004 3.689161 CAGTTGAAATTCATAGCCGTGGA 59.311 43.478 0.00 0.00 0.00 4.02
1589 8022 5.909621 ACATTCAGCAATGCTAATCAGTT 57.090 34.783 7.70 0.00 43.03 3.16
1593 8026 4.807304 CCCAAACATTCAGCAATGCTAATC 59.193 41.667 7.70 0.00 43.03 1.75
1600 8033 1.648116 AGCCCCAAACATTCAGCAAT 58.352 45.000 0.00 0.00 0.00 3.56
1617 8050 5.605534 AGATCTATGTCACCATGTGTAAGC 58.394 41.667 0.00 0.00 34.79 3.09
1618 8051 6.809869 TGAGATCTATGTCACCATGTGTAAG 58.190 40.000 0.00 0.00 34.79 2.34
1622 8055 5.927115 CAGATGAGATCTATGTCACCATGTG 59.073 44.000 0.00 0.00 37.58 3.21
1623 8056 5.837438 TCAGATGAGATCTATGTCACCATGT 59.163 40.000 0.00 0.00 37.58 3.21
1664 8098 0.563173 TAGCCCCTCCTGCATAGAGT 59.437 55.000 11.71 0.00 0.00 3.24
1665 8099 1.346068 GTTAGCCCCTCCTGCATAGAG 59.654 57.143 6.87 6.87 0.00 2.43
1667 8101 1.428869 AGTTAGCCCCTCCTGCATAG 58.571 55.000 0.00 0.00 0.00 2.23
1701 8137 2.977772 ACTCTACTCTGCCTTGATGC 57.022 50.000 0.00 0.00 0.00 3.91
1703 8139 6.782000 AGATGATAACTCTACTCTGCCTTGAT 59.218 38.462 0.00 0.00 0.00 2.57
1705 8141 6.183360 ACAGATGATAACTCTACTCTGCCTTG 60.183 42.308 0.00 0.00 34.80 3.61
1708 8144 5.068460 ACACAGATGATAACTCTACTCTGCC 59.932 44.000 0.00 0.00 34.80 4.85
1712 8148 5.068460 AGGCACACAGATGATAACTCTACTC 59.932 44.000 0.00 0.00 0.00 2.59
1719 8155 5.824904 ATTCAAGGCACACAGATGATAAC 57.175 39.130 0.00 0.00 0.00 1.89
1722 8158 3.119245 GCAATTCAAGGCACACAGATGAT 60.119 43.478 0.00 0.00 0.00 2.45
1724 8160 2.029739 TGCAATTCAAGGCACACAGATG 60.030 45.455 0.00 0.00 34.58 2.90
1729 8165 5.626543 CGATATAATGCAATTCAAGGCACAC 59.373 40.000 0.00 0.00 43.75 3.82
1730 8166 5.530543 TCGATATAATGCAATTCAAGGCACA 59.469 36.000 0.00 0.00 43.75 4.57
1752 8192 0.378257 CCCAAATGTTCGATGGCTCG 59.622 55.000 0.00 0.77 46.41 5.03
1761 8201 3.259123 AGAGCAACAATCCCCAAATGTTC 59.741 43.478 0.00 0.00 35.22 3.18
1766 8206 2.632512 GGAAAGAGCAACAATCCCCAAA 59.367 45.455 0.00 0.00 0.00 3.28
1786 8265 1.843851 TGTAAGGACCATTAGGCAGGG 59.156 52.381 0.00 0.00 39.06 4.45
1792 8276 7.624360 TGCTACAAATTGTAAGGACCATTAG 57.376 36.000 7.30 0.00 31.67 1.73
1826 8310 2.851263 ACACGGCAACAATCCTTCTA 57.149 45.000 0.00 0.00 0.00 2.10
1834 8318 0.681564 ACCAGGAAACACGGCAACAA 60.682 50.000 0.00 0.00 0.00 2.83
1861 8345 2.999331 ACATTTATGCTAAGGCGGTGT 58.001 42.857 0.00 0.00 42.25 4.16
1863 8347 3.616219 TGAACATTTATGCTAAGGCGGT 58.384 40.909 0.00 0.00 42.25 5.68
1871 8355 9.970395 CACCATGTTATAATGAACATTTATGCT 57.030 29.630 5.37 0.00 45.65 3.79
1872 8356 9.195411 CCACCATGTTATAATGAACATTTATGC 57.805 33.333 5.37 0.00 45.65 3.14
1875 8359 9.467796 TGACCACCATGTTATAATGAACATTTA 57.532 29.630 5.37 0.00 45.65 1.40
1876 8360 8.359875 TGACCACCATGTTATAATGAACATTT 57.640 30.769 5.37 0.00 45.65 2.32
1898 8382 7.859875 GCAAGATTAGGAAATTAAGAGCATGAC 59.140 37.037 0.00 0.00 0.00 3.06
1916 8400 3.107601 ACTCAGTAGGCAGGCAAGATTA 58.892 45.455 0.00 0.00 0.00 1.75
1924 8408 3.093057 AGTCACTAACTCAGTAGGCAGG 58.907 50.000 0.00 0.00 34.98 4.85
1962 8447 1.480137 CCAACCAAAAACACCAGCTCA 59.520 47.619 0.00 0.00 0.00 4.26
1978 8463 4.459390 ACCAAAAACACCAAGTACCAAC 57.541 40.909 0.00 0.00 0.00 3.77
1979 8464 4.322801 CCAACCAAAAACACCAAGTACCAA 60.323 41.667 0.00 0.00 0.00 3.67
1980 8465 3.195825 CCAACCAAAAACACCAAGTACCA 59.804 43.478 0.00 0.00 0.00 3.25
1981 8466 3.196039 ACCAACCAAAAACACCAAGTACC 59.804 43.478 0.00 0.00 0.00 3.34
1982 8467 4.459390 ACCAACCAAAAACACCAAGTAC 57.541 40.909 0.00 0.00 0.00 2.73
1983 8468 5.262804 AGTACCAACCAAAAACACCAAGTA 58.737 37.500 0.00 0.00 0.00 2.24
1984 8469 4.090819 AGTACCAACCAAAAACACCAAGT 58.909 39.130 0.00 0.00 0.00 3.16
1985 8470 4.729227 AGTACCAACCAAAAACACCAAG 57.271 40.909 0.00 0.00 0.00 3.61
1986 8471 4.773149 AGAAGTACCAACCAAAAACACCAA 59.227 37.500 0.00 0.00 0.00 3.67
1989 8474 7.148205 TGTCTAAGAAGTACCAACCAAAAACAC 60.148 37.037 0.00 0.00 0.00 3.32
1998 8483 7.153315 AGTAGCTTTGTCTAAGAAGTACCAAC 58.847 38.462 0.00 0.00 35.80 3.77
2025 8510 9.528018 CACAACAGTGTCCAAAACTAAATATTT 57.472 29.630 5.89 5.89 35.07 1.40
2033 8519 3.950397 TCTCACAACAGTGTCCAAAACT 58.050 40.909 0.00 0.00 35.07 2.66
2039 8525 1.532868 GTGCATCTCACAACAGTGTCC 59.467 52.381 0.00 0.00 44.98 4.02
2143 8629 9.276590 GATTGTTTTCCCATTTTTCAAGATCTT 57.723 29.630 0.88 0.88 0.00 2.40
2148 8634 7.125113 CGTTGATTGTTTTCCCATTTTTCAAG 58.875 34.615 0.00 0.00 0.00 3.02
2339 8825 3.133721 GTCATACCTCTGCTGGATCAAGT 59.866 47.826 0.00 0.00 0.00 3.16
2399 8997 5.243060 ACAGGTATTGCCCAAGACTTAAAAC 59.757 40.000 5.85 0.00 38.26 2.43
2407 9005 1.890573 GCCAACAGGTATTGCCCAAGA 60.891 52.381 0.00 0.00 38.26 3.02
2435 9033 9.838339 CAGTCTAGATAACAGGAACCAAATTAT 57.162 33.333 0.00 0.00 0.00 1.28
2662 9261 0.687354 TTGCTCCAAGGAGTCCTGAC 59.313 55.000 13.89 1.33 43.70 3.51
2716 9639 0.668706 AGAGCGCTGCACTGTACTTG 60.669 55.000 18.48 0.00 0.00 3.16
2839 9766 4.520179 TCGAGAACTACTACACCAGCATA 58.480 43.478 0.00 0.00 0.00 3.14
2866 9793 7.706607 CTTTATTTATAAAGCAGGGTGAAAGCC 59.293 37.037 8.78 0.00 46.96 4.35
2867 9794 8.634475 CTTTATTTATAAAGCAGGGTGAAAGC 57.366 34.615 8.78 0.00 41.69 3.51
2892 9819 1.470098 CTACACCAGCAGGATGTTTGC 59.530 52.381 0.35 0.00 41.83 3.68
2893 9820 2.783135 ACTACACCAGCAGGATGTTTG 58.217 47.619 0.35 2.85 39.31 2.93
2894 9821 3.583086 ACTACTACACCAGCAGGATGTTT 59.417 43.478 0.35 0.00 39.31 2.83
2895 9822 3.173965 ACTACTACACCAGCAGGATGTT 58.826 45.455 0.35 0.00 39.31 2.71
2896 9823 2.821437 ACTACTACACCAGCAGGATGT 58.179 47.619 0.35 5.41 39.31 3.06
2897 9824 3.895232 AACTACTACACCAGCAGGATG 57.105 47.619 0.35 0.00 38.69 3.51
2898 9825 4.611367 ACTAACTACTACACCAGCAGGAT 58.389 43.478 0.35 0.00 38.69 3.24
2899 9826 4.043608 ACTAACTACTACACCAGCAGGA 57.956 45.455 0.35 0.00 38.69 3.86
2900 9827 4.803098 AACTAACTACTACACCAGCAGG 57.197 45.455 0.00 0.00 42.21 4.85
2901 9828 6.150641 TGAGTAACTAACTACTACACCAGCAG 59.849 42.308 0.00 0.00 39.07 4.24
2902 9829 6.005823 TGAGTAACTAACTACTACACCAGCA 58.994 40.000 0.00 0.00 39.07 4.41
2903 9830 6.150809 ACTGAGTAACTAACTACTACACCAGC 59.849 42.308 0.00 0.00 39.07 4.85
2904 9831 7.684937 ACTGAGTAACTAACTACTACACCAG 57.315 40.000 0.00 0.00 39.07 4.00
2905 9832 8.469309 AAACTGAGTAACTAACTACTACACCA 57.531 34.615 0.00 0.00 39.07 4.17
2906 9833 9.189723 CAAAACTGAGTAACTAACTACTACACC 57.810 37.037 0.00 0.00 39.07 4.16
2907 9834 9.741647 ACAAAACTGAGTAACTAACTACTACAC 57.258 33.333 0.00 0.00 39.07 2.90
2925 9852 8.594687 CAAACTGTCAAGGATTAAACAAAACTG 58.405 33.333 0.00 0.00 0.00 3.16
2947 9874 8.925700 GGGTTTATCATTTTCTGAATGTCAAAC 58.074 33.333 14.89 14.89 37.44 2.93
2948 9875 8.093927 GGGGTTTATCATTTTCTGAATGTCAAA 58.906 33.333 0.00 0.00 37.44 2.69
2981 9908 1.899814 TGGACCAATTCGAGCTGTACT 59.100 47.619 0.00 0.00 0.00 2.73
3048 9975 3.559238 AACGGAAATGCTAGCAAGTTG 57.441 42.857 23.54 13.07 0.00 3.16
3087 10015 1.136891 ACGTGCATATGACTGCTGCTA 59.863 47.619 6.97 0.00 42.75 3.49
3236 11081 9.515020 GTTGAGTTCTTTGAACAATGTATCAAA 57.485 29.630 16.62 16.62 41.78 2.69
3244 11089 8.562892 CATACTGAGTTGAGTTCTTTGAACAAT 58.437 33.333 12.16 0.00 0.00 2.71
3377 11222 9.883142 AAACTACGAGTACTAACACTAGTATCT 57.117 33.333 0.00 0.00 41.57 1.98
3397 11249 9.155053 CTTCTCGTTAATGACAAAACAAACTAC 57.845 33.333 0.00 0.00 0.00 2.73
3411 11263 7.518161 TGCAGTATTTTCACTTCTCGTTAATG 58.482 34.615 0.00 0.00 0.00 1.90
3418 11270 4.154918 CCACCTGCAGTATTTTCACTTCTC 59.845 45.833 13.81 0.00 0.00 2.87
3419 11271 4.074970 CCACCTGCAGTATTTTCACTTCT 58.925 43.478 13.81 0.00 0.00 2.85
3420 11272 3.821033 ACCACCTGCAGTATTTTCACTTC 59.179 43.478 13.81 0.00 0.00 3.01
3421 11273 3.832527 ACCACCTGCAGTATTTTCACTT 58.167 40.909 13.81 0.00 0.00 3.16
3422 11274 3.508845 ACCACCTGCAGTATTTTCACT 57.491 42.857 13.81 0.00 0.00 3.41
3509 11361 0.329596 AGGCTGAAGATCCCCAACAC 59.670 55.000 0.00 0.00 0.00 3.32
3600 11452 2.971261 GCTTTTACAAAGTTCCTTCGCG 59.029 45.455 0.00 0.00 0.00 5.87
3603 11455 8.349983 TGTCATTAGCTTTTACAAAGTTCCTTC 58.650 33.333 0.00 0.00 0.00 3.46
3644 11504 4.384056 AGTGAAACACCTGATCAGTGAAG 58.616 43.478 21.11 8.44 41.43 3.02
3693 11554 4.046286 TGTCATCAGGGGTAAAAATGCT 57.954 40.909 0.00 0.00 0.00 3.79
3742 11603 0.685097 TCCTCAGTAGGCAAACGCTT 59.315 50.000 0.00 0.00 43.31 4.68
3787 11648 4.655963 TGCTTAGAGCTTTCAATCAACCT 58.344 39.130 1.29 0.00 42.97 3.50
3789 11650 4.083110 TGCTGCTTAGAGCTTTCAATCAAC 60.083 41.667 0.00 0.00 42.97 3.18
3888 11749 1.714794 CAGAATCCGACTGTGGTGTC 58.285 55.000 0.00 0.00 0.00 3.67
4032 11924 9.555727 TTTGTAACACTAGCATCTTAGAAACTT 57.444 29.630 0.00 0.00 0.00 2.66
4055 11947 9.463443 CTGTTCCCTTTTGTATTTAGAGTTTTG 57.537 33.333 0.00 0.00 0.00 2.44
4361 12997 9.341078 AGTAAGTAGGACTGCTAGAATAAGTAC 57.659 37.037 0.00 0.00 0.00 2.73
4549 13228 2.423538 GCGTAGTCCCCGAGTTAACTAA 59.576 50.000 8.42 0.00 0.00 2.24
4561 13240 2.529151 CAAATGCAAATGCGTAGTCCC 58.471 47.619 0.00 0.00 45.83 4.46
4568 13247 1.717194 AAGGAGCAAATGCAAATGCG 58.283 45.000 18.00 0.00 46.98 4.73
4570 13249 4.512198 TGTGAAAAGGAGCAAATGCAAATG 59.488 37.500 8.28 0.00 45.16 2.32
4598 13333 6.257849 GTGTTTGTGTCAGAAGAGTGTAATCA 59.742 38.462 0.00 0.00 0.00 2.57
4599 13334 6.292919 GGTGTTTGTGTCAGAAGAGTGTAATC 60.293 42.308 0.00 0.00 0.00 1.75
4617 13352 6.260493 ACAATTTTGGACATCATTGGTGTTTG 59.740 34.615 3.64 6.23 31.94 2.93
4718 13453 2.161855 GAAATGGACATCAGTGTGGCA 58.838 47.619 1.76 0.00 39.09 4.92
4793 13528 1.807814 AGTTGTCCTTGGTGACTCCT 58.192 50.000 0.00 0.00 36.21 3.69
4796 13531 3.644966 TCAAAGTTGTCCTTGGTGACT 57.355 42.857 0.00 0.00 36.21 3.41
4922 13657 9.696917 AAGCTCAAAATATTTCAATCGACTTTT 57.303 25.926 0.10 0.00 0.00 2.27
4939 13674 9.213777 TCTATAATCCCTAAGAGAAGCTCAAAA 57.786 33.333 0.00 0.00 32.06 2.44
4940 13675 8.643324 GTCTATAATCCCTAAGAGAAGCTCAAA 58.357 37.037 0.00 0.00 32.06 2.69
4956 13691 9.905713 ATCTGACTATCTCTGAGTCTATAATCC 57.094 37.037 4.32 0.00 43.19 3.01
4975 13710 0.247736 GTTCACGCCAGGATCTGACT 59.752 55.000 0.00 0.00 32.44 3.41
5008 13743 0.526524 GCAGTTCTCATCCCGTCTCG 60.527 60.000 0.00 0.00 0.00 4.04
5015 13750 3.118847 TGACATCTCTGCAGTTCTCATCC 60.119 47.826 14.67 0.00 0.00 3.51
5046 13782 0.458543 CCCTGGTGATCGAGTTCACG 60.459 60.000 11.89 1.30 45.63 4.35
5054 13790 2.202797 CGTCTGCCCTGGTGATCG 60.203 66.667 0.00 0.00 0.00 3.69
5058 13794 1.153489 CATCTCGTCTGCCCTGGTG 60.153 63.158 0.00 0.00 0.00 4.17
5078 13814 1.336240 GCCCAAAGTTAGCTGCAGTTG 60.336 52.381 16.64 10.35 0.00 3.16
5124 13860 0.884704 GGGTGCGCTCTTCTCAACAA 60.885 55.000 9.73 0.00 0.00 2.83
5125 13861 1.301716 GGGTGCGCTCTTCTCAACA 60.302 57.895 9.73 0.00 0.00 3.33
5163 13899 1.214325 CGTGGTGTGCGGTCATCTA 59.786 57.895 0.00 0.00 0.00 1.98
5206 13944 1.086067 ATCTTGACTGCGATGGTGCG 61.086 55.000 0.00 0.00 37.81 5.34
5245 13991 4.036027 CAGCCGAGCTAACATCATCAAATT 59.964 41.667 0.00 0.00 36.40 1.82
5246 13992 3.562973 CAGCCGAGCTAACATCATCAAAT 59.437 43.478 0.00 0.00 36.40 2.32
5283 14031 1.078709 ATCAACGGTGATGCAAGACG 58.921 50.000 16.83 0.00 43.13 4.18
5311 14059 7.335171 ACCGCGTTTAATTTACCTAAGAAAGAT 59.665 33.333 4.92 0.00 0.00 2.40
5334 14082 1.189403 GTCTTCGCGTTCATCTACCG 58.811 55.000 5.77 0.00 0.00 4.02
5355 14104 2.270257 TGCAGTCATTGGTGCAGCC 61.270 57.895 14.36 5.89 44.70 4.85
5553 14485 3.461061 CACACTCACAATCGGCTCATAT 58.539 45.455 0.00 0.00 0.00 1.78
5639 14571 9.656323 TCCTATCATTACTAAAAGAGCTTCCTA 57.344 33.333 0.00 0.00 0.00 2.94
5701 14658 7.037438 CAGGATTGATTTTGGACGATTTCATT 58.963 34.615 0.00 0.00 0.00 2.57
5790 14747 9.516546 GGGAAGAAAGAAAGAAGAATTAAGGTA 57.483 33.333 0.00 0.00 0.00 3.08
5824 14781 2.614481 GCGTTACAAAGGTGGAGATCCA 60.614 50.000 0.00 0.00 45.30 3.41
5890 14847 2.963499 CATCCTGATGTCGTCCACG 58.037 57.895 0.00 0.00 41.45 4.94
6031 14988 2.102252 CACTCCTCCAGCTGGAAGATAC 59.898 54.545 34.30 0.00 44.91 2.24
6064 15021 5.957771 TGTCTACAAGCCTTATCTCCATT 57.042 39.130 0.00 0.00 0.00 3.16
6091 15048 4.363999 CTCGTTCAAATCTAGCTGGTAGG 58.636 47.826 13.43 0.00 0.00 3.18
6097 15054 3.618690 AAGCCTCGTTCAAATCTAGCT 57.381 42.857 0.00 0.00 0.00 3.32
6110 15067 8.075574 TGATTTGTATATTTATGCAAAGCCTCG 58.924 33.333 19.54 0.00 46.66 4.63
6111 15068 9.918630 ATGATTTGTATATTTATGCAAAGCCTC 57.081 29.630 19.54 12.83 46.66 4.70
6161 15118 5.810587 TGAACCTTATTTAAGTCTAGCAGCG 59.189 40.000 0.00 0.00 0.00 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.