Multiple sequence alignment - TraesCS5A01G435000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G435000 chr5A 100.000 3068 0 0 1 3068 618269582 618272649 0.000000e+00 5666.0
1 TraesCS5A01G435000 chr5A 84.084 1244 175 15 842 2080 618602595 618603820 0.000000e+00 1179.0
2 TraesCS5A01G435000 chr5A 81.594 1054 180 10 1158 2198 618430316 618431368 0.000000e+00 859.0
3 TraesCS5A01G435000 chr5A 82.653 196 30 4 1060 1253 618448175 618448368 1.460000e-38 171.0
4 TraesCS5A01G435000 chr5A 100.000 28 0 0 2734 2761 618309476 618309503 6.000000e-03 52.8
5 TraesCS5A01G435000 chr5D 90.421 1545 108 16 838 2377 494684647 494686156 0.000000e+00 1997.0
6 TraesCS5A01G435000 chr5D 86.521 1098 143 5 984 2077 494654379 494655475 0.000000e+00 1203.0
7 TraesCS5A01G435000 chr5D 83.719 1296 183 16 842 2127 494761644 494762921 0.000000e+00 1199.0
8 TraesCS5A01G435000 chr5D 89.963 538 34 8 294 815 494683954 494684487 0.000000e+00 676.0
9 TraesCS5A01G435000 chr5D 83.929 392 43 12 2497 2877 494686195 494686577 1.050000e-94 357.0
10 TraesCS5A01G435000 chr5D 87.119 295 37 1 1 295 24780101 24780394 1.760000e-87 333.0
11 TraesCS5A01G435000 chr5D 85.782 211 24 5 2673 2877 494672363 494672573 5.150000e-53 219.0
12 TraesCS5A01G435000 chr5D 85.782 211 24 5 2673 2877 494674128 494674338 5.150000e-53 219.0
13 TraesCS5A01G435000 chr5D 83.607 122 14 5 2884 3005 494686638 494686753 3.230000e-20 110.0
14 TraesCS5A01G435000 chr5D 83.065 124 14 6 2884 3007 494672634 494672750 4.180000e-19 106.0
15 TraesCS5A01G435000 chr5D 100.000 34 0 0 808 841 494684494 494684527 2.550000e-06 63.9
16 TraesCS5A01G435000 chr5B 89.527 1585 127 16 841 2418 610922828 610924380 0.000000e+00 1971.0
17 TraesCS5A01G435000 chr5B 83.861 1295 183 14 842 2127 611322972 611324249 0.000000e+00 1210.0
18 TraesCS5A01G435000 chr5B 81.759 1228 202 15 985 2198 610965571 610966790 0.000000e+00 1007.0
19 TraesCS5A01G435000 chr5B 83.257 1087 167 11 990 2070 611045388 611046465 0.000000e+00 985.0
20 TraesCS5A01G435000 chr5B 90.079 504 44 4 294 794 610922131 610922631 0.000000e+00 649.0
21 TraesCS5A01G435000 chr5B 90.847 295 25 2 1 294 106806565 106806858 7.970000e-106 394.0
22 TraesCS5A01G435000 chr5B 80.586 273 35 9 2497 2761 610924538 610924800 8.680000e-46 195.0
23 TraesCS5A01G435000 chr5B 91.837 49 4 0 2829 2877 610924815 610924863 5.490000e-08 69.4
24 TraesCS5A01G435000 chr2A 92.881 295 18 3 1 293 27510819 27511112 2.830000e-115 425.0
25 TraesCS5A01G435000 chr2A 94.203 69 3 1 3001 3068 17203628 17203560 1.500000e-18 104.0
26 TraesCS5A01G435000 chr4A 90.203 296 26 3 1 295 655670414 655670121 1.730000e-102 383.0
27 TraesCS5A01G435000 chr4A 98.361 61 1 0 3008 3068 714305602 714305662 1.160000e-19 108.0
28 TraesCS5A01G435000 chr3B 89.078 293 30 2 1 292 774461382 774461673 2.250000e-96 363.0
29 TraesCS5A01G435000 chr3B 88.095 294 33 2 1 293 716297367 716297075 6.300000e-92 348.0
30 TraesCS5A01G435000 chr3B 98.361 61 1 0 3008 3068 767495865 767495925 1.160000e-19 108.0
31 TraesCS5A01G435000 chr3A 87.671 292 33 3 1 290 27293572 27293862 1.360000e-88 337.0
32 TraesCS5A01G435000 chr1D 87.415 294 33 4 1 294 428607243 428607532 4.900000e-88 335.0
33 TraesCS5A01G435000 chr4D 86.032 315 34 9 1 311 28554057 28553749 2.280000e-86 329.0
34 TraesCS5A01G435000 chr6D 87.319 276 24 6 2102 2377 26850318 26850582 3.840000e-79 305.0
35 TraesCS5A01G435000 chr6D 87.319 276 24 6 2102 2377 26886985 26887249 3.840000e-79 305.0
36 TraesCS5A01G435000 chr6D 83.871 310 32 10 2497 2797 26887288 26887588 2.330000e-71 279.0
37 TraesCS5A01G435000 chr6D 83.226 310 34 10 2497 2797 26850621 26850921 5.040000e-68 268.0
38 TraesCS5A01G435000 chr6D 97.015 67 2 0 3002 3068 82026841 82026907 2.500000e-21 113.0
39 TraesCS5A01G435000 chr7A 96.923 65 2 0 3003 3067 484242075 484242139 3.230000e-20 110.0
40 TraesCS5A01G435000 chr2B 93.056 72 5 0 2997 3068 541200210 541200139 4.180000e-19 106.0
41 TraesCS5A01G435000 chr7D 94.118 68 4 0 3001 3068 254995738 254995671 1.500000e-18 104.0
42 TraesCS5A01G435000 chr6B 96.721 61 2 0 3008 3068 397044608 397044548 5.410000e-18 102.0
43 TraesCS5A01G435000 chr6A 90.789 76 6 1 2992 3067 585414730 585414656 1.950000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G435000 chr5A 618269582 618272649 3067 False 5666.00 5666 100.00000 1 3068 1 chr5A.!!$F1 3067
1 TraesCS5A01G435000 chr5A 618602595 618603820 1225 False 1179.00 1179 84.08400 842 2080 1 chr5A.!!$F5 1238
2 TraesCS5A01G435000 chr5A 618430316 618431368 1052 False 859.00 859 81.59400 1158 2198 1 chr5A.!!$F3 1040
3 TraesCS5A01G435000 chr5D 494654379 494655475 1096 False 1203.00 1203 86.52100 984 2077 1 chr5D.!!$F2 1093
4 TraesCS5A01G435000 chr5D 494761644 494762921 1277 False 1199.00 1199 83.71900 842 2127 1 chr5D.!!$F3 1285
5 TraesCS5A01G435000 chr5D 494683954 494686753 2799 False 640.78 1997 89.58400 294 3005 5 chr5D.!!$F5 2711
6 TraesCS5A01G435000 chr5B 611322972 611324249 1277 False 1210.00 1210 83.86100 842 2127 1 chr5B.!!$F4 1285
7 TraesCS5A01G435000 chr5B 610965571 610966790 1219 False 1007.00 1007 81.75900 985 2198 1 chr5B.!!$F2 1213
8 TraesCS5A01G435000 chr5B 611045388 611046465 1077 False 985.00 985 83.25700 990 2070 1 chr5B.!!$F3 1080
9 TraesCS5A01G435000 chr5B 610922131 610924863 2732 False 721.10 1971 88.00725 294 2877 4 chr5B.!!$F5 2583
10 TraesCS5A01G435000 chr6D 26886985 26887588 603 False 292.00 305 85.59500 2102 2797 2 chr6D.!!$F3 695
11 TraesCS5A01G435000 chr6D 26850318 26850921 603 False 286.50 305 85.27250 2102 2797 2 chr6D.!!$F2 695

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
535 550 0.035439 TCCAACTCCAAAGGCGATCC 60.035 55.0 0.0 0.0 0.0 3.36 F
971 1163 0.449388 CTCTGGCGAAACTTGCATCC 59.551 55.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1998 2217 0.676736 GGAGGATTCCAGCTACGAGG 59.323 60.0 5.29 0.0 43.45 4.63 R
2821 3203 0.244450 TAACGACCTGAACGCCGATT 59.756 50.0 0.00 0.0 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.886247 TTTGTTAGTTTTGTCGTGAGGG 57.114 40.909 0.00 0.00 0.00 4.30
48 49 2.215196 TGTTAGTTTTGTCGTGAGGGC 58.785 47.619 0.00 0.00 0.00 5.19
49 50 1.534163 GTTAGTTTTGTCGTGAGGGCC 59.466 52.381 0.00 0.00 0.00 5.80
50 51 1.053424 TAGTTTTGTCGTGAGGGCCT 58.947 50.000 5.25 5.25 0.00 5.19
51 52 0.182775 AGTTTTGTCGTGAGGGCCTT 59.817 50.000 7.89 0.00 0.00 4.35
52 53 1.029681 GTTTTGTCGTGAGGGCCTTT 58.970 50.000 7.89 0.00 0.00 3.11
53 54 1.407618 GTTTTGTCGTGAGGGCCTTTT 59.592 47.619 7.89 0.00 0.00 2.27
54 55 1.770294 TTTGTCGTGAGGGCCTTTTT 58.230 45.000 7.89 0.00 0.00 1.94
55 56 1.028905 TTGTCGTGAGGGCCTTTTTG 58.971 50.000 7.89 0.00 0.00 2.44
56 57 0.821711 TGTCGTGAGGGCCTTTTTGG 60.822 55.000 7.89 0.00 39.35 3.28
57 58 0.822121 GTCGTGAGGGCCTTTTTGGT 60.822 55.000 7.89 0.00 38.35 3.67
58 59 0.766131 TCGTGAGGGCCTTTTTGGTA 59.234 50.000 7.89 0.00 38.35 3.25
59 60 1.143277 TCGTGAGGGCCTTTTTGGTAA 59.857 47.619 7.89 0.00 38.35 2.85
60 61 1.539827 CGTGAGGGCCTTTTTGGTAAG 59.460 52.381 7.89 0.00 38.35 2.34
61 62 2.812613 CGTGAGGGCCTTTTTGGTAAGA 60.813 50.000 7.89 0.00 38.35 2.10
62 63 3.227614 GTGAGGGCCTTTTTGGTAAGAA 58.772 45.455 7.89 0.00 38.35 2.52
63 64 3.639561 GTGAGGGCCTTTTTGGTAAGAAA 59.360 43.478 7.89 0.00 38.35 2.52
64 65 4.100344 GTGAGGGCCTTTTTGGTAAGAAAA 59.900 41.667 7.89 0.00 38.35 2.29
65 66 4.904853 TGAGGGCCTTTTTGGTAAGAAAAT 59.095 37.500 7.89 0.00 38.35 1.82
66 67 6.014925 GTGAGGGCCTTTTTGGTAAGAAAATA 60.015 38.462 7.89 0.00 38.35 1.40
67 68 6.555360 TGAGGGCCTTTTTGGTAAGAAAATAA 59.445 34.615 7.89 0.00 38.35 1.40
68 69 7.236640 TGAGGGCCTTTTTGGTAAGAAAATAAT 59.763 33.333 7.89 0.00 38.35 1.28
69 70 7.984475 AGGGCCTTTTTGGTAAGAAAATAATT 58.016 30.769 0.00 0.00 38.35 1.40
70 71 8.100791 AGGGCCTTTTTGGTAAGAAAATAATTC 58.899 33.333 0.00 0.00 38.35 2.17
71 72 8.100791 GGGCCTTTTTGGTAAGAAAATAATTCT 58.899 33.333 0.84 0.00 38.35 2.40
72 73 8.935844 GGCCTTTTTGGTAAGAAAATAATTCTG 58.064 33.333 0.00 0.00 38.35 3.02
73 74 8.935844 GCCTTTTTGGTAAGAAAATAATTCTGG 58.064 33.333 0.00 0.00 38.35 3.86
74 75 9.435688 CCTTTTTGGTAAGAAAATAATTCTGGG 57.564 33.333 0.00 0.00 0.00 4.45
75 76 9.435688 CTTTTTGGTAAGAAAATAATTCTGGGG 57.564 33.333 0.00 0.00 0.00 4.96
76 77 8.499288 TTTTGGTAAGAAAATAATTCTGGGGT 57.501 30.769 0.00 0.00 0.00 4.95
77 78 8.499288 TTTGGTAAGAAAATAATTCTGGGGTT 57.501 30.769 0.00 0.00 0.00 4.11
78 79 8.499288 TTGGTAAGAAAATAATTCTGGGGTTT 57.501 30.769 0.00 0.00 0.00 3.27
79 80 8.499288 TGGTAAGAAAATAATTCTGGGGTTTT 57.501 30.769 0.00 0.00 0.00 2.43
80 81 8.590204 TGGTAAGAAAATAATTCTGGGGTTTTC 58.410 33.333 0.00 0.00 38.44 2.29
81 82 8.038944 GGTAAGAAAATAATTCTGGGGTTTTCC 58.961 37.037 0.00 0.00 38.75 3.13
112 113 3.055719 CCACGCGCCCTTGTCAAT 61.056 61.111 5.73 0.00 0.00 2.57
113 114 2.176546 CACGCGCCCTTGTCAATG 59.823 61.111 5.73 0.00 0.00 2.82
114 115 2.031919 ACGCGCCCTTGTCAATGA 59.968 55.556 5.73 0.00 0.00 2.57
115 116 2.325082 ACGCGCCCTTGTCAATGAC 61.325 57.895 5.73 6.41 0.00 3.06
116 117 2.324330 CGCGCCCTTGTCAATGACA 61.324 57.895 12.63 12.63 41.09 3.58
117 118 1.503542 GCGCCCTTGTCAATGACAG 59.496 57.895 16.10 10.35 43.69 3.51
118 119 1.237285 GCGCCCTTGTCAATGACAGT 61.237 55.000 16.10 0.00 43.69 3.55
119 120 0.518636 CGCCCTTGTCAATGACAGTG 59.481 55.000 16.10 12.67 43.69 3.66
120 121 0.883833 GCCCTTGTCAATGACAGTGG 59.116 55.000 21.57 21.57 43.69 4.00
121 122 1.538047 CCCTTGTCAATGACAGTGGG 58.462 55.000 28.58 28.58 43.69 4.61
122 123 0.883833 CCTTGTCAATGACAGTGGGC 59.116 55.000 21.56 0.00 43.69 5.36
123 124 0.883833 CTTGTCAATGACAGTGGGCC 59.116 55.000 16.10 0.00 43.69 5.80
124 125 0.539438 TTGTCAATGACAGTGGGCCC 60.539 55.000 17.59 17.59 43.69 5.80
125 126 1.678970 GTCAATGACAGTGGGCCCC 60.679 63.158 22.27 11.17 32.09 5.80
126 127 2.159490 TCAATGACAGTGGGCCCCA 61.159 57.895 22.27 10.19 0.00 4.96
127 128 1.000739 CAATGACAGTGGGCCCCAT 59.999 57.895 22.27 12.40 35.28 4.00
128 129 1.000739 AATGACAGTGGGCCCCATG 59.999 57.895 22.27 20.49 35.28 3.66
129 130 2.519119 AATGACAGTGGGCCCCATGG 62.519 60.000 22.27 4.14 35.28 3.66
139 140 3.301070 CCCCATGGCATGTTGGTG 58.699 61.111 24.80 9.89 0.00 4.17
140 141 1.610086 CCCCATGGCATGTTGGTGT 60.610 57.895 24.80 0.00 0.00 4.16
141 142 1.592743 CCCATGGCATGTTGGTGTG 59.407 57.895 24.80 8.50 0.00 3.82
142 143 1.079681 CCATGGCATGTTGGTGTGC 60.080 57.895 24.80 0.00 40.55 4.57
146 147 4.972591 GCATGTTGGTGTGCCTTC 57.027 55.556 0.00 0.00 35.35 3.46
147 148 2.344535 GCATGTTGGTGTGCCTTCT 58.655 52.632 0.00 0.00 35.35 2.85
148 149 0.242017 GCATGTTGGTGTGCCTTCTC 59.758 55.000 0.00 0.00 35.35 2.87
149 150 1.608055 CATGTTGGTGTGCCTTCTCA 58.392 50.000 0.00 0.00 35.27 3.27
150 151 1.538512 CATGTTGGTGTGCCTTCTCAG 59.461 52.381 0.00 0.00 35.27 3.35
151 152 0.819259 TGTTGGTGTGCCTTCTCAGC 60.819 55.000 0.00 0.00 35.47 4.26
152 153 0.536006 GTTGGTGTGCCTTCTCAGCT 60.536 55.000 0.00 0.00 35.80 4.24
153 154 0.183492 TTGGTGTGCCTTCTCAGCTT 59.817 50.000 0.00 0.00 35.80 3.74
154 155 0.250467 TGGTGTGCCTTCTCAGCTTC 60.250 55.000 0.00 0.00 35.80 3.86
155 156 1.294659 GGTGTGCCTTCTCAGCTTCG 61.295 60.000 0.00 0.00 33.05 3.79
156 157 0.601311 GTGTGCCTTCTCAGCTTCGT 60.601 55.000 0.00 0.00 0.00 3.85
157 158 0.601046 TGTGCCTTCTCAGCTTCGTG 60.601 55.000 0.00 0.00 0.00 4.35
158 159 1.004560 TGCCTTCTCAGCTTCGTGG 60.005 57.895 0.00 0.00 0.00 4.94
159 160 1.293498 GCCTTCTCAGCTTCGTGGA 59.707 57.895 0.00 0.00 0.00 4.02
160 161 1.016653 GCCTTCTCAGCTTCGTGGAC 61.017 60.000 0.00 0.00 0.00 4.02
161 162 0.734253 CCTTCTCAGCTTCGTGGACG 60.734 60.000 0.00 0.00 41.45 4.79
162 163 0.039074 CTTCTCAGCTTCGTGGACGT 60.039 55.000 0.00 0.00 40.80 4.34
163 164 1.199327 CTTCTCAGCTTCGTGGACGTA 59.801 52.381 0.00 0.00 40.80 3.57
164 165 1.460504 TCTCAGCTTCGTGGACGTAT 58.539 50.000 0.00 0.00 40.80 3.06
165 166 2.635714 TCTCAGCTTCGTGGACGTATA 58.364 47.619 0.00 0.00 40.80 1.47
166 167 2.353889 TCTCAGCTTCGTGGACGTATAC 59.646 50.000 0.00 0.00 40.80 1.47
167 168 2.086094 TCAGCTTCGTGGACGTATACA 58.914 47.619 3.32 0.00 40.80 2.29
168 169 2.488937 TCAGCTTCGTGGACGTATACAA 59.511 45.455 3.32 0.00 40.80 2.41
169 170 3.057386 TCAGCTTCGTGGACGTATACAAA 60.057 43.478 3.32 0.00 40.80 2.83
170 171 3.060363 CAGCTTCGTGGACGTATACAAAC 59.940 47.826 3.32 0.00 40.80 2.93
172 173 1.616620 TCGTGGACGTATACAAACGC 58.383 50.000 3.32 0.00 46.71 4.84
173 174 0.641783 CGTGGACGTATACAAACGCC 59.358 55.000 3.32 0.00 46.71 5.68
174 175 1.712401 GTGGACGTATACAAACGCCA 58.288 50.000 3.32 7.95 46.71 5.69
175 176 2.273557 GTGGACGTATACAAACGCCAT 58.726 47.619 12.96 0.00 46.71 4.40
176 177 2.674357 GTGGACGTATACAAACGCCATT 59.326 45.455 12.96 0.00 46.71 3.16
177 178 3.125658 GTGGACGTATACAAACGCCATTT 59.874 43.478 12.96 0.00 46.71 2.32
178 179 4.329528 GTGGACGTATACAAACGCCATTTA 59.670 41.667 12.96 0.00 46.71 1.40
179 180 4.934001 TGGACGTATACAAACGCCATTTAA 59.066 37.500 3.32 0.00 46.71 1.52
180 181 5.410746 TGGACGTATACAAACGCCATTTAAA 59.589 36.000 3.32 0.00 46.71 1.52
181 182 5.734035 GGACGTATACAAACGCCATTTAAAC 59.266 40.000 3.32 0.00 46.71 2.01
182 183 6.402442 GGACGTATACAAACGCCATTTAAACT 60.402 38.462 3.32 0.00 46.71 2.66
183 184 6.308675 ACGTATACAAACGCCATTTAAACTG 58.691 36.000 3.32 0.00 46.71 3.16
184 185 6.073112 ACGTATACAAACGCCATTTAAACTGT 60.073 34.615 3.32 0.00 46.71 3.55
185 186 7.117523 ACGTATACAAACGCCATTTAAACTGTA 59.882 33.333 3.32 0.00 46.71 2.74
186 187 8.117988 CGTATACAAACGCCATTTAAACTGTAT 58.882 33.333 3.32 0.00 35.87 2.29
189 190 9.944663 ATACAAACGCCATTTAAACTGTATATG 57.055 29.630 0.00 0.00 0.00 1.78
190 191 6.750039 ACAAACGCCATTTAAACTGTATATGC 59.250 34.615 0.00 0.00 0.00 3.14
191 192 6.443934 AACGCCATTTAAACTGTATATGCA 57.556 33.333 0.00 0.00 0.00 3.96
192 193 5.816919 ACGCCATTTAAACTGTATATGCAC 58.183 37.500 0.00 0.00 0.00 4.57
193 194 4.903585 CGCCATTTAAACTGTATATGCACG 59.096 41.667 0.00 0.00 0.00 5.34
194 195 5.503357 CGCCATTTAAACTGTATATGCACGT 60.503 40.000 0.00 0.00 0.00 4.49
195 196 5.907391 GCCATTTAAACTGTATATGCACGTC 59.093 40.000 0.00 0.00 0.00 4.34
196 197 6.427150 CCATTTAAACTGTATATGCACGTCC 58.573 40.000 0.00 0.00 0.00 4.79
197 198 6.037720 CCATTTAAACTGTATATGCACGTCCA 59.962 38.462 0.00 0.00 0.00 4.02
198 199 7.255104 CCATTTAAACTGTATATGCACGTCCAT 60.255 37.037 0.00 0.00 0.00 3.41
199 200 6.597262 TTAAACTGTATATGCACGTCCATG 57.403 37.500 1.14 0.00 0.00 3.66
200 201 2.483876 ACTGTATATGCACGTCCATGC 58.516 47.619 1.14 0.00 46.32 4.06
201 202 1.800586 CTGTATATGCACGTCCATGCC 59.199 52.381 1.14 0.00 45.50 4.40
202 203 1.139853 TGTATATGCACGTCCATGCCA 59.860 47.619 1.14 0.00 45.50 4.92
203 204 2.217750 GTATATGCACGTCCATGCCAA 58.782 47.619 1.14 0.00 45.50 4.52
204 205 1.311859 ATATGCACGTCCATGCCAAG 58.688 50.000 1.14 0.00 45.50 3.61
205 206 0.035534 TATGCACGTCCATGCCAAGT 60.036 50.000 1.14 0.00 45.50 3.16
206 207 0.895100 ATGCACGTCCATGCCAAGTT 60.895 50.000 0.00 0.00 45.50 2.66
207 208 0.250510 TGCACGTCCATGCCAAGTTA 60.251 50.000 0.00 0.00 45.50 2.24
208 209 1.094785 GCACGTCCATGCCAAGTTAT 58.905 50.000 0.00 0.00 39.86 1.89
209 210 1.472480 GCACGTCCATGCCAAGTTATT 59.528 47.619 0.00 0.00 39.86 1.40
210 211 2.731968 GCACGTCCATGCCAAGTTATTG 60.732 50.000 0.00 0.00 39.86 1.90
211 212 2.746904 CACGTCCATGCCAAGTTATTGA 59.253 45.455 0.00 0.00 38.83 2.57
212 213 3.190327 CACGTCCATGCCAAGTTATTGAA 59.810 43.478 0.00 0.00 38.83 2.69
213 214 3.190535 ACGTCCATGCCAAGTTATTGAAC 59.809 43.478 0.00 0.00 38.83 3.18
214 215 3.427503 CGTCCATGCCAAGTTATTGAACC 60.428 47.826 0.00 0.00 38.83 3.62
215 216 3.509575 GTCCATGCCAAGTTATTGAACCA 59.490 43.478 0.00 0.00 38.83 3.67
216 217 3.763360 TCCATGCCAAGTTATTGAACCAG 59.237 43.478 0.00 0.00 38.83 4.00
217 218 3.511146 CCATGCCAAGTTATTGAACCAGT 59.489 43.478 0.00 0.00 38.83 4.00
218 219 4.021192 CCATGCCAAGTTATTGAACCAGTT 60.021 41.667 0.00 0.00 38.83 3.16
219 220 4.846779 TGCCAAGTTATTGAACCAGTTC 57.153 40.909 3.52 3.52 38.83 3.01
220 221 4.211125 TGCCAAGTTATTGAACCAGTTCA 58.789 39.130 9.12 9.12 46.72 3.18
231 232 5.181690 TGAACCAGTTCAATGTACTTTGC 57.818 39.130 14.93 4.33 45.56 3.68
232 233 4.642437 TGAACCAGTTCAATGTACTTTGCA 59.358 37.500 14.93 3.47 45.56 4.08
233 234 5.126222 TGAACCAGTTCAATGTACTTTGCAA 59.874 36.000 14.93 0.00 45.56 4.08
234 235 5.186996 ACCAGTTCAATGTACTTTGCAAG 57.813 39.130 14.93 0.00 0.00 4.01
235 236 4.644685 ACCAGTTCAATGTACTTTGCAAGT 59.355 37.500 14.93 10.61 45.40 3.16
236 237 5.127031 ACCAGTTCAATGTACTTTGCAAGTT 59.873 36.000 14.93 0.00 42.81 2.66
237 238 5.687285 CCAGTTCAATGTACTTTGCAAGTTC 59.313 40.000 14.93 0.00 42.81 3.01
238 239 6.264832 CAGTTCAATGTACTTTGCAAGTTCA 58.735 36.000 14.93 5.16 41.91 3.18
239 240 6.415867 CAGTTCAATGTACTTTGCAAGTTCAG 59.584 38.462 14.93 0.00 41.18 3.02
240 241 5.437289 TCAATGTACTTTGCAAGTTCAGG 57.563 39.130 14.93 2.54 41.18 3.86
241 242 3.923017 ATGTACTTTGCAAGTTCAGGC 57.077 42.857 0.00 0.00 41.18 4.85
242 243 2.649190 TGTACTTTGCAAGTTCAGGCA 58.351 42.857 0.00 0.00 42.81 4.75
243 244 2.357637 TGTACTTTGCAAGTTCAGGCAC 59.642 45.455 0.00 0.00 42.81 5.01
244 245 1.767759 ACTTTGCAAGTTCAGGCACT 58.232 45.000 0.00 0.00 39.04 4.40
245 246 2.930950 ACTTTGCAAGTTCAGGCACTA 58.069 42.857 0.00 0.00 39.04 2.74
246 247 3.287222 ACTTTGCAAGTTCAGGCACTAA 58.713 40.909 0.00 0.00 39.04 2.24
247 248 3.699038 ACTTTGCAAGTTCAGGCACTAAA 59.301 39.130 0.00 0.00 39.04 1.85
248 249 3.988379 TTGCAAGTTCAGGCACTAAAG 57.012 42.857 0.00 0.00 40.23 1.85
249 250 2.930950 TGCAAGTTCAGGCACTAAAGT 58.069 42.857 0.00 0.00 36.02 2.66
250 251 8.552506 ACTTTGCAAGTTCAGGCACTAAAGTG 62.553 42.308 5.73 5.73 43.25 3.16
261 262 3.770263 CACTAAAGTGCACATCCATGG 57.230 47.619 21.04 4.97 39.39 3.66
262 263 2.094675 ACTAAAGTGCACATCCATGGC 58.905 47.619 21.04 0.00 0.00 4.40
263 264 2.093890 CTAAAGTGCACATCCATGGCA 58.906 47.619 21.04 0.00 33.62 4.92
264 265 1.340088 AAAGTGCACATCCATGGCAA 58.660 45.000 21.04 0.00 36.33 4.52
265 266 0.892755 AAGTGCACATCCATGGCAAG 59.107 50.000 21.04 1.25 36.33 4.01
266 267 0.251474 AGTGCACATCCATGGCAAGT 60.251 50.000 21.04 1.97 36.33 3.16
267 268 0.604578 GTGCACATCCATGGCAAGTT 59.395 50.000 13.17 0.00 36.33 2.66
268 269 0.889994 TGCACATCCATGGCAAGTTC 59.110 50.000 6.96 0.26 33.29 3.01
269 270 0.889994 GCACATCCATGGCAAGTTCA 59.110 50.000 6.96 0.00 0.00 3.18
270 271 1.273048 GCACATCCATGGCAAGTTCAA 59.727 47.619 6.96 0.00 0.00 2.69
271 272 2.673043 GCACATCCATGGCAAGTTCAAG 60.673 50.000 6.96 0.00 0.00 3.02
272 273 1.547372 ACATCCATGGCAAGTTCAAGC 59.453 47.619 6.96 0.00 0.00 4.01
273 274 1.546923 CATCCATGGCAAGTTCAAGCA 59.453 47.619 6.96 0.00 0.00 3.91
274 275 0.961019 TCCATGGCAAGTTCAAGCAC 59.039 50.000 6.96 0.00 0.00 4.40
275 276 0.037975 CCATGGCAAGTTCAAGCACC 60.038 55.000 0.00 0.00 0.00 5.01
276 277 0.675083 CATGGCAAGTTCAAGCACCA 59.325 50.000 0.00 0.00 0.00 4.17
277 278 1.274167 CATGGCAAGTTCAAGCACCAT 59.726 47.619 0.00 0.00 38.42 3.55
278 279 1.412079 TGGCAAGTTCAAGCACCATT 58.588 45.000 0.00 0.00 0.00 3.16
279 280 1.068895 TGGCAAGTTCAAGCACCATTG 59.931 47.619 0.00 0.00 0.00 2.82
280 281 1.340889 GGCAAGTTCAAGCACCATTGA 59.659 47.619 0.00 0.00 37.41 2.57
281 282 2.028748 GGCAAGTTCAAGCACCATTGAT 60.029 45.455 0.00 0.00 38.90 2.57
282 283 2.991190 GCAAGTTCAAGCACCATTGATG 59.009 45.455 0.00 0.00 38.90 3.07
283 284 3.553508 GCAAGTTCAAGCACCATTGATGT 60.554 43.478 0.00 0.00 38.90 3.06
284 285 4.321156 GCAAGTTCAAGCACCATTGATGTA 60.321 41.667 0.00 0.00 38.90 2.29
285 286 5.622914 GCAAGTTCAAGCACCATTGATGTAT 60.623 40.000 0.00 0.00 38.90 2.29
286 287 6.392354 CAAGTTCAAGCACCATTGATGTATT 58.608 36.000 0.00 0.00 38.90 1.89
287 288 6.594788 AGTTCAAGCACCATTGATGTATTT 57.405 33.333 0.00 0.00 38.90 1.40
288 289 7.701539 AGTTCAAGCACCATTGATGTATTTA 57.298 32.000 0.00 0.00 38.90 1.40
289 290 7.538575 AGTTCAAGCACCATTGATGTATTTAC 58.461 34.615 0.00 0.00 38.90 2.01
290 291 6.449635 TCAAGCACCATTGATGTATTTACC 57.550 37.500 0.00 0.00 34.31 2.85
291 292 6.186957 TCAAGCACCATTGATGTATTTACCT 58.813 36.000 0.00 0.00 34.31 3.08
292 293 6.318648 TCAAGCACCATTGATGTATTTACCTC 59.681 38.462 0.00 0.00 34.31 3.85
361 364 3.873361 GAGCATGATGATCCGACTCAAAA 59.127 43.478 0.00 0.00 0.00 2.44
401 404 4.490706 TGATGTCAGATCCCATCATCTCT 58.509 43.478 13.44 0.00 41.77 3.10
404 407 2.566724 GTCAGATCCCATCATCTCTCCC 59.433 54.545 0.00 0.00 30.07 4.30
426 429 4.452825 CATGATCCTTCATCAAGTGCTCT 58.547 43.478 0.00 0.00 45.06 4.09
436 451 4.399303 TCATCAAGTGCTCTATCGAAGTCA 59.601 41.667 0.00 0.00 0.00 3.41
473 488 3.232483 GTCCGTAGCCTAGGCCCC 61.232 72.222 30.42 19.22 43.17 5.80
487 502 2.688477 AGGCCCCAAAAGTTTGATTCA 58.312 42.857 0.00 0.00 40.55 2.57
490 505 2.799978 GCCCCAAAAGTTTGATTCAACG 59.200 45.455 5.34 0.00 40.55 4.10
503 518 3.674281 TGATTCAACGCAATTGCACAATC 59.326 39.130 28.77 24.64 42.21 2.67
535 550 0.035439 TCCAACTCCAAAGGCGATCC 60.035 55.000 0.00 0.00 0.00 3.36
549 564 8.290325 CCAAAGGCGATCCTAGTTTAAAATATC 58.710 37.037 0.00 0.00 43.40 1.63
552 567 9.574516 AAGGCGATCCTAGTTTAAAATATCAAT 57.425 29.630 0.00 0.00 43.40 2.57
580 595 6.289745 TGTTAAGATGTTAAACGTGACCAC 57.710 37.500 0.00 0.00 29.74 4.16
604 619 4.675510 ACAGAAAAGATGTTGTGTTGCTG 58.324 39.130 0.00 0.00 31.39 4.41
664 680 4.706476 CCAAAATGGTCAGGATGCTTCTAA 59.294 41.667 0.00 0.00 34.76 2.10
665 681 5.361857 CCAAAATGGTCAGGATGCTTCTAAT 59.638 40.000 0.00 0.00 34.76 1.73
666 682 6.547141 CCAAAATGGTCAGGATGCTTCTAATA 59.453 38.462 0.00 0.00 34.76 0.98
713 729 2.125753 GCAGTCTCAGCCGTCCTG 60.126 66.667 0.00 0.00 43.17 3.86
714 730 2.125753 CAGTCTCAGCCGTCCTGC 60.126 66.667 0.00 0.00 41.50 4.85
717 733 3.071206 TCTCAGCCGTCCTGCCTC 61.071 66.667 0.00 0.00 41.50 4.70
803 871 1.658686 CCTAACTCGCTGTCCGCTCT 61.659 60.000 0.00 0.00 36.73 4.09
806 874 0.961358 AACTCGCTGTCCGCTCTACT 60.961 55.000 0.00 0.00 36.73 2.57
945 1137 8.919145 AGATACAGATAGAGGGAACAAAACTAG 58.081 37.037 0.00 0.00 0.00 2.57
948 1140 6.070710 ACAGATAGAGGGAACAAAACTAGTCC 60.071 42.308 0.00 0.00 0.00 3.85
950 1142 4.893829 AGAGGGAACAAAACTAGTCCTC 57.106 45.455 13.97 13.97 39.49 3.71
959 1151 0.684805 AACTAGTCCTCCCTCTGGCG 60.685 60.000 0.00 0.00 0.00 5.69
966 1158 0.674895 CCTCCCTCTGGCGAAACTTG 60.675 60.000 0.00 0.00 0.00 3.16
971 1163 0.449388 CTCTGGCGAAACTTGCATCC 59.551 55.000 0.00 0.00 0.00 3.51
980 1172 3.751175 CGAAACTTGCATCCTACTCCAAA 59.249 43.478 0.00 0.00 0.00 3.28
981 1173 4.142816 CGAAACTTGCATCCTACTCCAAAG 60.143 45.833 0.00 0.00 0.00 2.77
982 1174 4.373156 AACTTGCATCCTACTCCAAAGT 57.627 40.909 0.00 0.00 39.66 2.66
983 1175 3.944087 ACTTGCATCCTACTCCAAAGTC 58.056 45.455 0.00 0.00 36.92 3.01
984 1176 3.274288 CTTGCATCCTACTCCAAAGTCC 58.726 50.000 0.00 0.00 36.92 3.85
985 1177 2.265367 TGCATCCTACTCCAAAGTCCA 58.735 47.619 0.00 0.00 36.92 4.02
986 1178 2.642311 TGCATCCTACTCCAAAGTCCAA 59.358 45.455 0.00 0.00 36.92 3.53
987 1179 3.073798 TGCATCCTACTCCAAAGTCCAAA 59.926 43.478 0.00 0.00 36.92 3.28
1050 1260 3.713764 CCATGGTATCTGAGGAAAGGTCT 59.286 47.826 2.57 0.00 0.00 3.85
1121 1331 0.809385 CTACTCAAGAACGGCGAGGA 59.191 55.000 16.62 2.12 0.00 3.71
1149 1359 1.073284 TCTACCCCTTTCAGTGTTGGC 59.927 52.381 0.00 0.00 0.00 4.52
1180 1390 2.812499 CCGTGCGCTACTACCCAT 59.188 61.111 9.73 0.00 0.00 4.00
1229 1439 5.446143 TTCATCTCTCTTTATCTCGAGCC 57.554 43.478 7.81 0.00 0.00 4.70
1288 1501 2.287427 ACGTTCAGTGTACTTGACGAGG 60.287 50.000 18.13 8.82 36.09 4.63
1305 1518 2.124695 GATGGAGAACCGGTGCCC 60.125 66.667 8.52 10.82 39.42 5.36
1403 1620 2.037620 GCTGATCTGGAGGCATCGGT 62.038 60.000 1.46 0.00 0.00 4.69
1469 1686 0.872388 ATCCACGGCGAAGAAACAAC 59.128 50.000 16.62 0.00 0.00 3.32
1478 1695 2.872858 GCGAAGAAACAACTGTTCCTCT 59.127 45.455 0.00 0.00 37.25 3.69
1481 1698 5.558463 GCGAAGAAACAACTGTTCCTCTAAC 60.558 44.000 0.00 0.00 37.25 2.34
1810 2029 2.896044 AGGCTGAAGATGATATGCGAGA 59.104 45.455 0.00 0.00 0.00 4.04
1998 2217 2.238521 TGCCCATCTGTTTTCAAGGAC 58.761 47.619 0.00 0.00 0.00 3.85
2129 2359 9.469097 TTTTGGTAGTAATGGTTATGCTACATT 57.531 29.630 0.00 0.00 38.31 2.71
2280 2521 1.610886 GCTAGGTTGTGTGGGTCCTTC 60.611 57.143 0.00 0.00 0.00 3.46
2283 2524 1.133792 AGGTTGTGTGGGTCCTTCAAG 60.134 52.381 0.00 0.00 0.00 3.02
2284 2525 1.409661 GGTTGTGTGGGTCCTTCAAGT 60.410 52.381 0.00 0.00 0.00 3.16
2286 2527 3.139077 GTTGTGTGGGTCCTTCAAGTAG 58.861 50.000 0.00 0.00 0.00 2.57
2312 2553 8.125448 GCACTATTAGATGATGGTGTTTCTTTC 58.875 37.037 0.00 0.00 39.74 2.62
2317 2558 6.966534 AGATGATGGTGTTTCTTTCTTTGT 57.033 33.333 0.00 0.00 0.00 2.83
2325 2567 6.095720 TGGTGTTTCTTTCTTTGTTCGGTTAT 59.904 34.615 0.00 0.00 0.00 1.89
2326 2568 6.976349 GGTGTTTCTTTCTTTGTTCGGTTATT 59.024 34.615 0.00 0.00 0.00 1.40
2327 2569 8.130469 GGTGTTTCTTTCTTTGTTCGGTTATTA 58.870 33.333 0.00 0.00 0.00 0.98
2328 2570 9.166126 GTGTTTCTTTCTTTGTTCGGTTATTAG 57.834 33.333 0.00 0.00 0.00 1.73
2329 2571 7.858879 TGTTTCTTTCTTTGTTCGGTTATTAGC 59.141 33.333 0.00 0.00 0.00 3.09
2330 2572 7.499321 TTCTTTCTTTGTTCGGTTATTAGCA 57.501 32.000 0.00 0.00 0.00 3.49
2331 2573 7.129109 TCTTTCTTTGTTCGGTTATTAGCAG 57.871 36.000 0.00 0.00 0.00 4.24
2332 2574 6.708949 TCTTTCTTTGTTCGGTTATTAGCAGT 59.291 34.615 0.00 0.00 0.00 4.40
2373 2615 3.951306 TCGCACTGAAAAACTGAATGTG 58.049 40.909 0.00 0.00 0.00 3.21
2376 2618 4.797868 CGCACTGAAAAACTGAATGTGAAA 59.202 37.500 0.00 0.00 0.00 2.69
2387 2629 5.202765 ACTGAATGTGAAATATGGATGCCA 58.797 37.500 0.00 0.00 38.19 4.92
2391 2633 5.717078 ATGTGAAATATGGATGCCATGTC 57.283 39.130 9.14 4.85 44.84 3.06
2399 2641 1.091771 GGATGCCATGTCTGTGGACG 61.092 60.000 0.00 0.00 44.83 4.79
2400 2642 0.108186 GATGCCATGTCTGTGGACGA 60.108 55.000 0.00 0.00 44.83 4.20
2422 2789 5.353956 CGATGGGATCTTGTGTTGTAATTCA 59.646 40.000 0.00 0.00 0.00 2.57
2426 2793 6.016360 TGGGATCTTGTGTTGTAATTCAGTTG 60.016 38.462 0.00 0.00 0.00 3.16
2440 2807 3.189287 ATTCAGTTGAAAGCACTAAGCCG 59.811 43.478 0.00 0.00 38.95 5.52
2443 2810 8.215880 ATTCAGTTGAAAGCACTAAGCCGAAG 62.216 42.308 0.00 0.00 38.95 3.79
2450 2817 3.993508 GCACTAAGCCGAAGTCTTAAC 57.006 47.619 0.00 0.00 37.23 2.01
2451 2818 3.323243 GCACTAAGCCGAAGTCTTAACA 58.677 45.455 0.00 0.00 37.23 2.41
2452 2819 3.368236 GCACTAAGCCGAAGTCTTAACAG 59.632 47.826 0.00 0.00 37.23 3.16
2453 2820 4.557205 CACTAAGCCGAAGTCTTAACAGT 58.443 43.478 0.00 0.00 23.45 3.55
2454 2821 4.989168 CACTAAGCCGAAGTCTTAACAGTT 59.011 41.667 0.00 0.00 23.45 3.16
2455 2822 5.465724 CACTAAGCCGAAGTCTTAACAGTTT 59.534 40.000 0.00 0.00 23.45 2.66
2456 2823 6.018180 CACTAAGCCGAAGTCTTAACAGTTTT 60.018 38.462 0.00 0.00 23.45 2.43
2457 2824 5.830000 AAGCCGAAGTCTTAACAGTTTTT 57.170 34.783 0.00 0.00 0.00 1.94
2458 2825 5.419760 AGCCGAAGTCTTAACAGTTTTTC 57.580 39.130 0.00 0.00 0.00 2.29
2459 2826 4.879545 AGCCGAAGTCTTAACAGTTTTTCA 59.120 37.500 0.00 0.00 0.00 2.69
2460 2827 5.355910 AGCCGAAGTCTTAACAGTTTTTCAA 59.644 36.000 0.00 0.00 0.00 2.69
2461 2828 6.031471 GCCGAAGTCTTAACAGTTTTTCAAA 58.969 36.000 0.00 0.00 0.00 2.69
2462 2829 6.528774 GCCGAAGTCTTAACAGTTTTTCAAAA 59.471 34.615 0.00 0.00 0.00 2.44
2463 2830 7.222031 GCCGAAGTCTTAACAGTTTTTCAAAAT 59.778 33.333 0.00 0.00 0.00 1.82
2464 2831 8.531530 CCGAAGTCTTAACAGTTTTTCAAAATG 58.468 33.333 0.00 0.00 0.00 2.32
2465 2832 9.284594 CGAAGTCTTAACAGTTTTTCAAAATGA 57.715 29.630 3.83 0.00 0.00 2.57
2513 2880 3.356290 AGCCGTAATCCTCAAGCATTTT 58.644 40.909 0.00 0.00 0.00 1.82
2515 2882 4.947388 AGCCGTAATCCTCAAGCATTTTAA 59.053 37.500 0.00 0.00 0.00 1.52
2521 2888 9.950680 CGTAATCCTCAAGCATTTTAATATTGT 57.049 29.630 0.00 0.00 0.00 2.71
2583 2955 7.938140 TTGGTTATTATTTCCCTCTGAACAG 57.062 36.000 0.00 0.00 31.05 3.16
2595 2967 2.036475 CTCTGAACAGTGCTGGTAGTGT 59.964 50.000 4.11 0.00 35.81 3.55
2616 2988 1.536766 TGCTGTGCACTTGTTATGCTC 59.463 47.619 19.41 0.00 43.77 4.26
2623 2995 1.474077 CACTTGTTATGCTCTTGGGGC 59.526 52.381 0.00 0.00 0.00 5.80
2624 2996 1.106285 CTTGTTATGCTCTTGGGGCC 58.894 55.000 0.00 0.00 0.00 5.80
2625 2997 0.679640 TTGTTATGCTCTTGGGGCCG 60.680 55.000 0.00 0.00 0.00 6.13
2626 2998 1.823899 GTTATGCTCTTGGGGCCGG 60.824 63.158 0.00 0.00 0.00 6.13
2648 3020 4.442332 GGGTTGTTTGGGTTCAGTTTTAGG 60.442 45.833 0.00 0.00 0.00 2.69
2667 3039 9.608617 GTTTTAGGAAACTCGATTTTAAAGGAG 57.391 33.333 0.18 9.94 41.50 3.69
2669 3041 9.563748 TTTAGGAAACTCGATTTTAAAGGAGAA 57.436 29.630 15.61 1.65 43.67 2.87
2670 3042 9.563748 TTAGGAAACTCGATTTTAAAGGAGAAA 57.436 29.630 15.61 0.00 43.67 2.52
2671 3043 8.459911 AGGAAACTCGATTTTAAAGGAGAAAA 57.540 30.769 15.61 0.00 32.90 2.29
2672 3044 8.568794 AGGAAACTCGATTTTAAAGGAGAAAAG 58.431 33.333 15.61 1.65 32.90 2.27
2704 3076 4.530094 TTGTAGTTTTCTGTTCAGCACG 57.470 40.909 0.00 0.00 0.00 5.34
2709 3081 4.051922 AGTTTTCTGTTCAGCACGACTAG 58.948 43.478 0.00 0.00 0.00 2.57
2761 3141 5.418840 AGTGGTTGTTGTCTTGAGAAAATGT 59.581 36.000 0.00 0.00 0.00 2.71
2770 3150 4.000988 TCTTGAGAAAATGTAGGGCGAAC 58.999 43.478 0.00 0.00 0.00 3.95
2772 3152 3.745799 TGAGAAAATGTAGGGCGAACAA 58.254 40.909 0.00 0.00 0.00 2.83
2774 3154 4.394920 TGAGAAAATGTAGGGCGAACAATC 59.605 41.667 0.00 0.00 0.00 2.67
2785 3165 3.119245 GGGCGAACAATCTGAGTACAGTA 60.119 47.826 0.00 0.00 43.81 2.74
2792 3172 9.188588 CGAACAATCTGAGTACAGTAAAAACTA 57.811 33.333 0.00 0.00 43.81 2.24
2811 3191 9.468532 AAAAACTATCTTCAAATCTCTTGTTGC 57.531 29.630 0.00 0.00 0.00 4.17
2812 3192 6.414408 ACTATCTTCAAATCTCTTGTTGCG 57.586 37.500 0.00 0.00 0.00 4.85
2813 3193 4.691860 ATCTTCAAATCTCTTGTTGCGG 57.308 40.909 0.00 0.00 0.00 5.69
2814 3194 3.476552 TCTTCAAATCTCTTGTTGCGGT 58.523 40.909 0.00 0.00 0.00 5.68
2815 3195 3.498397 TCTTCAAATCTCTTGTTGCGGTC 59.502 43.478 0.00 0.00 0.00 4.79
2821 3203 2.093890 TCTCTTGTTGCGGTCGGTATA 58.906 47.619 0.00 0.00 0.00 1.47
2824 3206 3.450578 TCTTGTTGCGGTCGGTATAATC 58.549 45.455 0.00 0.00 0.00 1.75
2873 3255 5.428457 TGGATTGTACTATCATTGGTGTCCT 59.572 40.000 17.26 0.00 0.00 3.85
2877 3259 9.209175 GATTGTACTATCATTGGTGTCCTAATC 57.791 37.037 11.76 0.00 0.00 1.75
2879 3261 6.548251 TGTACTATCATTGGTGTCCTAATCGA 59.452 38.462 0.00 0.00 0.00 3.59
2881 3263 7.067496 ACTATCATTGGTGTCCTAATCGATT 57.933 36.000 16.15 16.15 0.00 3.34
2882 3264 6.931281 ACTATCATTGGTGTCCTAATCGATTG 59.069 38.462 20.87 10.25 0.00 2.67
2889 3325 4.211374 GGTGTCCTAATCGATTGCACATAC 59.789 45.833 20.87 11.61 0.00 2.39
2898 3334 3.932710 TCGATTGCACATACTTTCTGGTC 59.067 43.478 0.00 0.00 0.00 4.02
2899 3335 3.684305 CGATTGCACATACTTTCTGGTCA 59.316 43.478 0.00 0.00 0.00 4.02
2901 3337 2.412870 TGCACATACTTTCTGGTCACG 58.587 47.619 0.00 0.00 0.00 4.35
2902 3338 1.128692 GCACATACTTTCTGGTCACGC 59.871 52.381 0.00 0.00 0.00 5.34
2908 3344 2.480426 CTTTCTGGTCACGCGAACGC 62.480 60.000 15.93 9.20 45.53 4.84
2948 3384 6.455513 GGTTCTTTGTTGCTGATTTTGTTCAC 60.456 38.462 0.00 0.00 0.00 3.18
2949 3385 5.718146 TCTTTGTTGCTGATTTTGTTCACA 58.282 33.333 0.00 0.00 0.00 3.58
2950 3386 5.576384 TCTTTGTTGCTGATTTTGTTCACAC 59.424 36.000 0.00 0.00 0.00 3.82
2953 3389 4.863689 TGTTGCTGATTTTGTTCACACAAG 59.136 37.500 0.00 0.00 43.92 3.16
2957 3393 4.741676 GCTGATTTTGTTCACACAAGAAGG 59.258 41.667 0.00 0.00 43.92 3.46
2977 3413 1.945522 CCGTGCCATTTGTCGTTGA 59.054 52.632 0.00 0.00 0.00 3.18
2984 3420 2.223711 GCCATTTGTCGTTGAAAGGTGT 60.224 45.455 0.00 0.00 0.00 4.16
2987 3423 3.955771 TTTGTCGTTGAAAGGTGTAGC 57.044 42.857 0.00 0.00 0.00 3.58
2988 3424 1.873698 TGTCGTTGAAAGGTGTAGCC 58.126 50.000 0.00 0.00 37.58 3.93
2996 3432 4.796408 AGGTGTAGCCTCTGGAGG 57.204 61.111 11.97 11.97 46.96 4.30
3009 3445 5.690997 CCTCTGGAGGTGAAAAGTTTTAC 57.309 43.478 8.39 0.83 43.61 2.01
3010 3446 5.377478 CCTCTGGAGGTGAAAAGTTTTACT 58.623 41.667 8.39 0.30 43.61 2.24
3011 3447 5.470437 CCTCTGGAGGTGAAAAGTTTTACTC 59.530 44.000 8.39 14.27 43.61 2.59
3012 3448 5.374071 TCTGGAGGTGAAAAGTTTTACTCC 58.626 41.667 25.09 25.09 31.28 3.85
3013 3449 4.466827 TGGAGGTGAAAAGTTTTACTCCC 58.533 43.478 26.91 15.26 30.44 4.30
3014 3450 4.167307 TGGAGGTGAAAAGTTTTACTCCCT 59.833 41.667 26.91 18.31 30.44 4.20
3015 3451 5.138276 GGAGGTGAAAAGTTTTACTCCCTT 58.862 41.667 23.15 6.32 0.00 3.95
3016 3452 5.597182 GGAGGTGAAAAGTTTTACTCCCTTT 59.403 40.000 23.15 5.83 0.00 3.11
3017 3453 6.097839 GGAGGTGAAAAGTTTTACTCCCTTTT 59.902 38.462 23.15 0.00 40.18 2.27
3018 3454 7.364408 GGAGGTGAAAAGTTTTACTCCCTTTTT 60.364 37.037 23.15 5.32 38.24 1.94
3038 3474 6.844097 TTTTTCCGGTTTATAAGGCTCAAT 57.156 33.333 0.00 0.00 0.00 2.57
3039 3475 6.844097 TTTTCCGGTTTATAAGGCTCAATT 57.156 33.333 0.00 0.00 0.00 2.32
3040 3476 6.445357 TTTCCGGTTTATAAGGCTCAATTC 57.555 37.500 0.00 0.00 0.00 2.17
3041 3477 5.105567 TCCGGTTTATAAGGCTCAATTCA 57.894 39.130 0.00 0.00 0.00 2.57
3042 3478 5.502079 TCCGGTTTATAAGGCTCAATTCAA 58.498 37.500 0.00 0.00 0.00 2.69
3043 3479 5.946972 TCCGGTTTATAAGGCTCAATTCAAA 59.053 36.000 0.00 0.00 0.00 2.69
3044 3480 6.434652 TCCGGTTTATAAGGCTCAATTCAAAA 59.565 34.615 0.00 0.00 0.00 2.44
3045 3481 7.039644 TCCGGTTTATAAGGCTCAATTCAAAAA 60.040 33.333 0.00 0.00 0.00 1.94
3046 3482 7.763985 CCGGTTTATAAGGCTCAATTCAAAAAT 59.236 33.333 0.00 0.00 0.00 1.82
3047 3483 8.807581 CGGTTTATAAGGCTCAATTCAAAAATC 58.192 33.333 0.00 0.00 0.00 2.17
3048 3484 9.875691 GGTTTATAAGGCTCAATTCAAAAATCT 57.124 29.630 0.00 0.00 0.00 2.40
3052 3488 5.397142 AGGCTCAATTCAAAAATCTCACC 57.603 39.130 0.00 0.00 0.00 4.02
3053 3489 4.834496 AGGCTCAATTCAAAAATCTCACCA 59.166 37.500 0.00 0.00 0.00 4.17
3054 3490 5.305128 AGGCTCAATTCAAAAATCTCACCAA 59.695 36.000 0.00 0.00 0.00 3.67
3055 3491 5.406477 GGCTCAATTCAAAAATCTCACCAAC 59.594 40.000 0.00 0.00 0.00 3.77
3056 3492 5.406477 GCTCAATTCAAAAATCTCACCAACC 59.594 40.000 0.00 0.00 0.00 3.77
3057 3493 6.477053 TCAATTCAAAAATCTCACCAACCA 57.523 33.333 0.00 0.00 0.00 3.67
3058 3494 6.882656 TCAATTCAAAAATCTCACCAACCAA 58.117 32.000 0.00 0.00 0.00 3.67
3059 3495 6.985645 TCAATTCAAAAATCTCACCAACCAAG 59.014 34.615 0.00 0.00 0.00 3.61
3060 3496 4.935352 TCAAAAATCTCACCAACCAAGG 57.065 40.909 0.00 0.00 0.00 3.61
3061 3497 4.285863 TCAAAAATCTCACCAACCAAGGT 58.714 39.130 0.00 0.00 44.48 3.50
3062 3498 5.450453 TCAAAAATCTCACCAACCAAGGTA 58.550 37.500 0.00 0.00 40.77 3.08
3063 3499 5.534654 TCAAAAATCTCACCAACCAAGGTAG 59.465 40.000 0.00 0.00 40.77 3.18
3064 3500 4.993705 AAATCTCACCAACCAAGGTAGA 57.006 40.909 0.00 0.00 40.77 2.59
3065 3501 5.520748 AAATCTCACCAACCAAGGTAGAT 57.479 39.130 0.00 0.00 40.77 1.98
3066 3502 3.981071 TCTCACCAACCAAGGTAGATG 57.019 47.619 0.00 0.00 40.77 2.90
3067 3503 2.571653 TCTCACCAACCAAGGTAGATGG 59.428 50.000 6.86 6.86 40.77 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 8.723311 CCCTCACGACAAAACTAACAAATTATA 58.277 33.333 0.00 0.00 0.00 0.98
22 23 7.590279 CCCTCACGACAAAACTAACAAATTAT 58.410 34.615 0.00 0.00 0.00 1.28
23 24 6.513720 GCCCTCACGACAAAACTAACAAATTA 60.514 38.462 0.00 0.00 0.00 1.40
24 25 5.735070 GCCCTCACGACAAAACTAACAAATT 60.735 40.000 0.00 0.00 0.00 1.82
25 26 4.261447 GCCCTCACGACAAAACTAACAAAT 60.261 41.667 0.00 0.00 0.00 2.32
26 27 3.065648 GCCCTCACGACAAAACTAACAAA 59.934 43.478 0.00 0.00 0.00 2.83
27 28 2.614983 GCCCTCACGACAAAACTAACAA 59.385 45.455 0.00 0.00 0.00 2.83
28 29 2.215196 GCCCTCACGACAAAACTAACA 58.785 47.619 0.00 0.00 0.00 2.41
29 30 1.534163 GGCCCTCACGACAAAACTAAC 59.466 52.381 0.00 0.00 0.00 2.34
30 31 1.418637 AGGCCCTCACGACAAAACTAA 59.581 47.619 0.00 0.00 0.00 2.24
31 32 1.053424 AGGCCCTCACGACAAAACTA 58.947 50.000 0.00 0.00 0.00 2.24
32 33 0.182775 AAGGCCCTCACGACAAAACT 59.817 50.000 0.00 0.00 0.00 2.66
33 34 1.029681 AAAGGCCCTCACGACAAAAC 58.970 50.000 0.00 0.00 0.00 2.43
34 35 1.770294 AAAAGGCCCTCACGACAAAA 58.230 45.000 0.00 0.00 0.00 2.44
35 36 1.407258 CAAAAAGGCCCTCACGACAAA 59.593 47.619 0.00 0.00 0.00 2.83
36 37 1.028905 CAAAAAGGCCCTCACGACAA 58.971 50.000 0.00 0.00 0.00 3.18
37 38 0.821711 CCAAAAAGGCCCTCACGACA 60.822 55.000 0.00 0.00 0.00 4.35
38 39 0.822121 ACCAAAAAGGCCCTCACGAC 60.822 55.000 0.00 0.00 43.14 4.34
39 40 0.766131 TACCAAAAAGGCCCTCACGA 59.234 50.000 0.00 0.00 43.14 4.35
40 41 1.539827 CTTACCAAAAAGGCCCTCACG 59.460 52.381 0.00 0.00 43.14 4.35
41 42 2.871453 TCTTACCAAAAAGGCCCTCAC 58.129 47.619 0.00 0.00 43.14 3.51
42 43 3.603965 TTCTTACCAAAAAGGCCCTCA 57.396 42.857 0.00 0.00 43.14 3.86
43 44 4.948341 TTTTCTTACCAAAAAGGCCCTC 57.052 40.909 0.00 0.00 43.14 4.30
44 45 7.568128 ATTATTTTCTTACCAAAAAGGCCCT 57.432 32.000 0.00 0.00 43.14 5.19
45 46 8.100791 AGAATTATTTTCTTACCAAAAAGGCCC 58.899 33.333 0.00 0.00 43.14 5.80
46 47 8.935844 CAGAATTATTTTCTTACCAAAAAGGCC 58.064 33.333 0.00 0.00 43.14 5.19
47 48 8.935844 CCAGAATTATTTTCTTACCAAAAAGGC 58.064 33.333 0.00 0.00 43.14 4.35
48 49 9.435688 CCCAGAATTATTTTCTTACCAAAAAGG 57.564 33.333 0.00 0.00 45.67 3.11
49 50 9.435688 CCCCAGAATTATTTTCTTACCAAAAAG 57.564 33.333 0.00 0.00 0.00 2.27
50 51 8.939932 ACCCCAGAATTATTTTCTTACCAAAAA 58.060 29.630 0.00 0.00 0.00 1.94
51 52 8.499288 ACCCCAGAATTATTTTCTTACCAAAA 57.501 30.769 0.00 0.00 0.00 2.44
52 53 8.499288 AACCCCAGAATTATTTTCTTACCAAA 57.501 30.769 0.00 0.00 0.00 3.28
53 54 8.499288 AAACCCCAGAATTATTTTCTTACCAA 57.501 30.769 0.00 0.00 0.00 3.67
54 55 8.499288 AAAACCCCAGAATTATTTTCTTACCA 57.501 30.769 0.00 0.00 0.00 3.25
55 56 8.038944 GGAAAACCCCAGAATTATTTTCTTACC 58.961 37.037 7.46 0.00 38.64 2.85
56 57 8.997621 GGAAAACCCCAGAATTATTTTCTTAC 57.002 34.615 7.46 0.00 38.64 2.34
95 96 3.055719 ATTGACAAGGGCGCGTGG 61.056 61.111 19.95 4.87 0.00 4.94
96 97 2.176546 CATTGACAAGGGCGCGTG 59.823 61.111 14.88 14.88 0.00 5.34
97 98 2.031919 TCATTGACAAGGGCGCGT 59.968 55.556 8.43 0.00 0.00 6.01
98 99 2.244436 CTGTCATTGACAAGGGCGCG 62.244 60.000 19.44 0.00 42.26 6.86
99 100 1.237285 ACTGTCATTGACAAGGGCGC 61.237 55.000 19.44 0.00 42.26 6.53
100 101 0.518636 CACTGTCATTGACAAGGGCG 59.481 55.000 19.44 10.50 42.26 6.13
101 102 0.883833 CCACTGTCATTGACAAGGGC 59.116 55.000 19.44 0.00 42.26 5.19
102 103 1.538047 CCCACTGTCATTGACAAGGG 58.462 55.000 28.67 28.67 45.09 3.95
103 104 0.883833 GCCCACTGTCATTGACAAGG 59.116 55.000 19.44 21.04 42.26 3.61
104 105 0.883833 GGCCCACTGTCATTGACAAG 59.116 55.000 19.44 14.45 42.26 3.16
105 106 0.539438 GGGCCCACTGTCATTGACAA 60.539 55.000 19.95 5.11 42.26 3.18
106 107 1.074775 GGGCCCACTGTCATTGACA 59.925 57.895 19.95 18.08 40.50 3.58
107 108 1.678970 GGGGCCCACTGTCATTGAC 60.679 63.158 26.86 9.93 0.00 3.18
108 109 1.508667 ATGGGGCCCACTGTCATTGA 61.509 55.000 31.54 0.00 35.80 2.57
109 110 1.000739 ATGGGGCCCACTGTCATTG 59.999 57.895 31.54 0.00 35.80 2.82
110 111 1.000739 CATGGGGCCCACTGTCATT 59.999 57.895 31.54 7.19 35.80 2.57
111 112 2.685366 CATGGGGCCCACTGTCAT 59.315 61.111 31.54 14.75 35.80 3.06
112 113 3.660571 CCATGGGGCCCACTGTCA 61.661 66.667 31.54 12.75 35.80 3.58
122 123 1.610086 ACACCAACATGCCATGGGG 60.610 57.895 15.13 12.31 45.95 4.96
123 124 1.592743 CACACCAACATGCCATGGG 59.407 57.895 15.13 4.04 41.17 4.00
124 125 1.079681 GCACACCAACATGCCATGG 60.080 57.895 7.63 7.63 42.60 3.66
125 126 4.582760 GCACACCAACATGCCATG 57.417 55.556 2.40 2.40 35.73 3.66
129 130 0.242017 GAGAAGGCACACCAACATGC 59.758 55.000 0.00 0.00 41.29 4.06
130 131 1.538512 CTGAGAAGGCACACCAACATG 59.461 52.381 0.00 0.00 39.06 3.21
131 132 1.901591 CTGAGAAGGCACACCAACAT 58.098 50.000 0.00 0.00 39.06 2.71
132 133 0.819259 GCTGAGAAGGCACACCAACA 60.819 55.000 0.00 0.00 39.06 3.33
133 134 0.536006 AGCTGAGAAGGCACACCAAC 60.536 55.000 0.00 0.00 39.06 3.77
134 135 0.183492 AAGCTGAGAAGGCACACCAA 59.817 50.000 0.00 0.00 39.06 3.67
135 136 0.250467 GAAGCTGAGAAGGCACACCA 60.250 55.000 0.00 0.00 39.06 4.17
136 137 1.294659 CGAAGCTGAGAAGGCACACC 61.295 60.000 0.00 0.00 0.00 4.16
137 138 0.601311 ACGAAGCTGAGAAGGCACAC 60.601 55.000 0.00 0.00 0.00 3.82
138 139 0.601046 CACGAAGCTGAGAAGGCACA 60.601 55.000 0.00 0.00 0.00 4.57
139 140 1.294659 CCACGAAGCTGAGAAGGCAC 61.295 60.000 0.00 0.00 0.00 5.01
140 141 1.004560 CCACGAAGCTGAGAAGGCA 60.005 57.895 0.00 0.00 0.00 4.75
141 142 1.016653 GTCCACGAAGCTGAGAAGGC 61.017 60.000 0.00 0.00 0.00 4.35
142 143 0.734253 CGTCCACGAAGCTGAGAAGG 60.734 60.000 0.00 0.00 43.02 3.46
143 144 0.039074 ACGTCCACGAAGCTGAGAAG 60.039 55.000 6.03 0.00 43.02 2.85
144 145 1.241165 TACGTCCACGAAGCTGAGAA 58.759 50.000 6.03 0.00 43.02 2.87
145 146 1.460504 ATACGTCCACGAAGCTGAGA 58.539 50.000 6.03 0.00 43.02 3.27
146 147 2.096980 TGTATACGTCCACGAAGCTGAG 59.903 50.000 6.03 0.00 43.02 3.35
147 148 2.086094 TGTATACGTCCACGAAGCTGA 58.914 47.619 6.03 0.00 43.02 4.26
148 149 2.554806 TGTATACGTCCACGAAGCTG 57.445 50.000 6.03 0.00 43.02 4.24
149 150 3.248266 GTTTGTATACGTCCACGAAGCT 58.752 45.455 6.03 0.00 43.02 3.74
150 151 2.027214 CGTTTGTATACGTCCACGAAGC 59.973 50.000 6.03 0.00 43.02 3.86
151 152 2.027214 GCGTTTGTATACGTCCACGAAG 59.973 50.000 15.87 0.00 43.22 3.79
152 153 1.984990 GCGTTTGTATACGTCCACGAA 59.015 47.619 15.87 0.00 43.22 3.85
153 154 1.616620 GCGTTTGTATACGTCCACGA 58.383 50.000 15.87 0.00 43.22 4.35
154 155 0.641783 GGCGTTTGTATACGTCCACG 59.358 55.000 0.00 10.09 43.22 4.94
155 156 1.712401 TGGCGTTTGTATACGTCCAC 58.288 50.000 0.00 0.00 45.03 4.02
156 157 2.676632 ATGGCGTTTGTATACGTCCA 57.323 45.000 12.21 12.21 45.03 4.02
157 158 5.467902 TTAAATGGCGTTTGTATACGTCC 57.532 39.130 14.80 0.00 45.03 4.79
158 159 6.463576 CAGTTTAAATGGCGTTTGTATACGTC 59.536 38.462 14.80 0.00 45.78 4.34
159 160 6.073112 ACAGTTTAAATGGCGTTTGTATACGT 60.073 34.615 14.80 0.00 43.22 3.57
160 161 6.308675 ACAGTTTAAATGGCGTTTGTATACG 58.691 36.000 14.80 0.00 44.09 3.06
163 164 9.944663 CATATACAGTTTAAATGGCGTTTGTAT 57.055 29.630 14.80 14.73 0.00 2.29
164 165 7.911205 GCATATACAGTTTAAATGGCGTTTGTA 59.089 33.333 14.80 8.87 0.00 2.41
165 166 6.750039 GCATATACAGTTTAAATGGCGTTTGT 59.250 34.615 14.80 6.92 0.00 2.83
166 167 6.749578 TGCATATACAGTTTAAATGGCGTTTG 59.250 34.615 14.80 0.80 0.00 2.93
167 168 6.750039 GTGCATATACAGTTTAAATGGCGTTT 59.250 34.615 9.96 9.96 0.00 3.60
168 169 6.262601 GTGCATATACAGTTTAAATGGCGTT 58.737 36.000 0.00 0.00 0.00 4.84
169 170 5.503357 CGTGCATATACAGTTTAAATGGCGT 60.503 40.000 0.00 0.00 0.00 5.68
170 171 4.903585 CGTGCATATACAGTTTAAATGGCG 59.096 41.667 0.00 0.00 0.00 5.69
171 172 5.816919 ACGTGCATATACAGTTTAAATGGC 58.183 37.500 0.00 0.00 0.00 4.40
172 173 6.037720 TGGACGTGCATATACAGTTTAAATGG 59.962 38.462 5.33 0.00 0.00 3.16
173 174 7.010697 TGGACGTGCATATACAGTTTAAATG 57.989 36.000 5.33 0.00 0.00 2.32
174 175 7.639039 CATGGACGTGCATATACAGTTTAAAT 58.361 34.615 22.75 0.00 0.00 1.40
175 176 6.457663 GCATGGACGTGCATATACAGTTTAAA 60.458 38.462 22.75 0.00 44.43 1.52
176 177 5.007234 GCATGGACGTGCATATACAGTTTAA 59.993 40.000 22.75 0.00 44.43 1.52
177 178 4.509970 GCATGGACGTGCATATACAGTTTA 59.490 41.667 22.75 0.00 44.43 2.01
178 179 3.312421 GCATGGACGTGCATATACAGTTT 59.688 43.478 22.75 0.00 44.43 2.66
179 180 2.872245 GCATGGACGTGCATATACAGTT 59.128 45.455 22.75 0.00 44.43 3.16
180 181 2.483876 GCATGGACGTGCATATACAGT 58.516 47.619 22.75 0.00 44.43 3.55
181 182 1.800586 GGCATGGACGTGCATATACAG 59.199 52.381 22.75 10.88 46.81 2.74
182 183 1.139853 TGGCATGGACGTGCATATACA 59.860 47.619 22.75 17.41 46.81 2.29
183 184 1.877637 TGGCATGGACGTGCATATAC 58.122 50.000 22.75 15.13 46.81 1.47
184 185 2.158827 ACTTGGCATGGACGTGCATATA 60.159 45.455 22.75 8.93 46.81 0.86
185 186 1.311859 CTTGGCATGGACGTGCATAT 58.688 50.000 22.75 0.00 46.81 1.78
186 187 0.035534 ACTTGGCATGGACGTGCATA 60.036 50.000 22.75 4.41 46.81 3.14
187 188 0.895100 AACTTGGCATGGACGTGCAT 60.895 50.000 17.64 17.64 46.81 3.96
188 189 0.250510 TAACTTGGCATGGACGTGCA 60.251 50.000 13.59 13.59 46.81 4.57
189 190 1.094785 ATAACTTGGCATGGACGTGC 58.905 50.000 7.96 7.96 44.31 5.34
190 191 2.746904 TCAATAACTTGGCATGGACGTG 59.253 45.455 0.00 0.00 32.95 4.49
191 192 3.066291 TCAATAACTTGGCATGGACGT 57.934 42.857 5.31 0.00 32.95 4.34
192 193 3.427503 GGTTCAATAACTTGGCATGGACG 60.428 47.826 5.31 0.00 35.81 4.79
193 194 3.509575 TGGTTCAATAACTTGGCATGGAC 59.490 43.478 5.31 0.00 35.81 4.02
194 195 3.763360 CTGGTTCAATAACTTGGCATGGA 59.237 43.478 5.31 0.00 35.81 3.41
195 196 3.511146 ACTGGTTCAATAACTTGGCATGG 59.489 43.478 5.31 0.00 35.81 3.66
196 197 4.789012 ACTGGTTCAATAACTTGGCATG 57.211 40.909 0.00 0.00 35.81 4.06
197 198 4.832266 TGAACTGGTTCAATAACTTGGCAT 59.168 37.500 12.94 0.00 45.56 4.40
198 199 4.211125 TGAACTGGTTCAATAACTTGGCA 58.789 39.130 12.94 0.00 45.56 4.92
199 200 4.846779 TGAACTGGTTCAATAACTTGGC 57.153 40.909 12.94 0.00 45.56 4.52
209 210 4.642437 TGCAAAGTACATTGAACTGGTTCA 59.358 37.500 14.72 11.53 46.72 3.18
210 211 5.181690 TGCAAAGTACATTGAACTGGTTC 57.818 39.130 14.72 6.53 39.91 3.62
211 212 5.590530 TTGCAAAGTACATTGAACTGGTT 57.409 34.783 14.72 0.00 31.84 3.67
212 213 5.186996 CTTGCAAAGTACATTGAACTGGT 57.813 39.130 14.72 0.00 39.70 4.00
226 227 6.239491 CACTTTAGTGCCTGAACTTGCAAAG 61.239 44.000 0.00 0.00 44.17 2.77
227 228 3.699038 ACTTTAGTGCCTGAACTTGCAAA 59.301 39.130 0.00 0.00 39.57 3.68
228 229 3.066621 CACTTTAGTGCCTGAACTTGCAA 59.933 43.478 0.00 0.00 39.57 4.08
229 230 2.618241 CACTTTAGTGCCTGAACTTGCA 59.382 45.455 0.00 0.00 39.39 4.08
230 231 3.273919 CACTTTAGTGCCTGAACTTGC 57.726 47.619 0.00 0.00 39.39 4.01
242 243 2.094675 GCCATGGATGTGCACTTTAGT 58.905 47.619 18.40 0.00 0.00 2.24
243 244 2.093890 TGCCATGGATGTGCACTTTAG 58.906 47.619 18.40 3.17 31.96 1.85
244 245 2.212812 TGCCATGGATGTGCACTTTA 57.787 45.000 18.40 5.79 31.96 1.85
245 246 1.274167 CTTGCCATGGATGTGCACTTT 59.726 47.619 18.40 5.40 35.02 2.66
246 247 0.892755 CTTGCCATGGATGTGCACTT 59.107 50.000 18.40 12.28 35.02 3.16
247 248 0.251474 ACTTGCCATGGATGTGCACT 60.251 50.000 18.40 3.19 35.02 4.40
248 249 0.604578 AACTTGCCATGGATGTGCAC 59.395 50.000 18.40 10.75 35.02 4.57
249 250 0.889994 GAACTTGCCATGGATGTGCA 59.110 50.000 18.40 2.03 34.00 4.57
250 251 0.889994 TGAACTTGCCATGGATGTGC 59.110 50.000 18.40 9.51 0.00 4.57
251 252 2.673043 GCTTGAACTTGCCATGGATGTG 60.673 50.000 18.40 4.37 0.00 3.21
252 253 1.547372 GCTTGAACTTGCCATGGATGT 59.453 47.619 18.40 7.44 0.00 3.06
253 254 1.546923 TGCTTGAACTTGCCATGGATG 59.453 47.619 18.40 6.73 0.00 3.51
254 255 1.547372 GTGCTTGAACTTGCCATGGAT 59.453 47.619 18.40 0.00 0.00 3.41
255 256 0.961019 GTGCTTGAACTTGCCATGGA 59.039 50.000 18.40 0.00 0.00 3.41
256 257 0.037975 GGTGCTTGAACTTGCCATGG 60.038 55.000 7.63 7.63 0.00 3.66
257 258 0.675083 TGGTGCTTGAACTTGCCATG 59.325 50.000 0.00 0.00 0.00 3.66
258 259 1.636148 ATGGTGCTTGAACTTGCCAT 58.364 45.000 0.00 0.00 32.48 4.40
259 260 1.068895 CAATGGTGCTTGAACTTGCCA 59.931 47.619 0.00 0.00 0.00 4.92
260 261 1.340889 TCAATGGTGCTTGAACTTGCC 59.659 47.619 0.00 0.00 32.35 4.52
261 262 2.798976 TCAATGGTGCTTGAACTTGC 57.201 45.000 0.00 0.00 32.35 4.01
262 263 4.247267 ACATCAATGGTGCTTGAACTTG 57.753 40.909 0.00 0.00 38.55 3.16
263 264 6.594788 AATACATCAATGGTGCTTGAACTT 57.405 33.333 0.00 0.00 38.55 2.66
264 265 6.594788 AAATACATCAATGGTGCTTGAACT 57.405 33.333 0.00 0.00 38.55 3.01
265 266 6.751888 GGTAAATACATCAATGGTGCTTGAAC 59.248 38.462 0.00 0.00 38.55 3.18
266 267 6.663093 AGGTAAATACATCAATGGTGCTTGAA 59.337 34.615 0.00 0.00 38.55 2.69
267 268 6.186957 AGGTAAATACATCAATGGTGCTTGA 58.813 36.000 0.00 0.00 39.35 3.02
268 269 6.319658 AGAGGTAAATACATCAATGGTGCTTG 59.680 38.462 7.84 0.00 39.29 4.01
269 270 6.426587 AGAGGTAAATACATCAATGGTGCTT 58.573 36.000 7.84 0.00 39.29 3.91
270 271 6.006275 AGAGGTAAATACATCAATGGTGCT 57.994 37.500 7.84 0.00 39.29 4.40
271 272 6.318648 TCAAGAGGTAAATACATCAATGGTGC 59.681 38.462 7.84 0.00 39.29 5.01
272 273 7.864108 TCAAGAGGTAAATACATCAATGGTG 57.136 36.000 7.84 0.00 39.29 4.17
273 274 8.877864 TTTCAAGAGGTAAATACATCAATGGT 57.122 30.769 7.84 0.00 39.29 3.55
318 321 7.164122 TGCTCTAGTTGAAACAATCTCTCATT 58.836 34.615 0.00 0.00 0.00 2.57
384 387 2.180751 TGGGAGAGATGATGGGATCTGA 59.819 50.000 0.00 0.00 32.57 3.27
401 404 3.686405 GCACTTGATGAAGGATCATGGGA 60.686 47.826 0.00 0.00 46.30 4.37
404 407 4.452825 AGAGCACTTGATGAAGGATCATG 58.547 43.478 0.00 0.00 46.30 3.07
426 429 3.898482 TCATGGAGGAGTGACTTCGATA 58.102 45.455 0.00 0.00 0.00 2.92
436 451 2.037620 GCCGCTGATCATGGAGGAGT 62.038 60.000 16.24 0.00 0.00 3.85
467 482 2.688477 TGAATCAAACTTTTGGGGCCT 58.312 42.857 0.84 0.00 38.66 5.19
473 488 5.393163 GCAATTGCGTTGAATCAAACTTTTG 59.607 36.000 15.87 0.60 40.37 2.44
487 502 1.665735 GGTCGATTGTGCAATTGCGTT 60.666 47.619 24.58 9.67 45.83 4.84
490 505 1.068333 ACTGGTCGATTGTGCAATTGC 60.068 47.619 23.69 23.69 42.50 3.56
552 567 9.881529 GGTCACGTTTAACATCTTAACAAAATA 57.118 29.630 0.00 0.00 0.00 1.40
580 595 3.725740 GCAACACAACATCTTTTCTGTCG 59.274 43.478 0.00 0.00 0.00 4.35
598 613 1.014352 AGAACACCAACGACAGCAAC 58.986 50.000 0.00 0.00 0.00 4.17
599 614 2.605837 TAGAACACCAACGACAGCAA 57.394 45.000 0.00 0.00 0.00 3.91
604 619 4.062991 AGGAACATTAGAACACCAACGAC 58.937 43.478 0.00 0.00 0.00 4.34
664 680 6.266103 CCTGATCAGGTAATGGTGCAATTTAT 59.734 38.462 30.55 0.00 43.61 1.40
665 681 5.593909 CCTGATCAGGTAATGGTGCAATTTA 59.406 40.000 30.55 0.00 43.61 1.40
666 682 4.403432 CCTGATCAGGTAATGGTGCAATTT 59.597 41.667 30.55 0.00 43.61 1.82
714 730 3.095163 ATGGGCTCAGGCAGGAGG 61.095 66.667 0.00 0.00 40.87 4.30
717 733 2.509916 GAGATGGGCTCAGGCAGG 59.490 66.667 0.00 0.00 43.38 4.85
745 761 6.458615 GGTTTTTACCAGACGCTGTTAGAAAA 60.459 38.462 6.19 5.44 0.00 2.29
751 767 2.645802 TGGTTTTTACCAGACGCTGTT 58.354 42.857 6.19 0.00 34.33 3.16
887 1079 1.079543 GCTGTCCAGTGATGTCGCT 60.080 57.895 0.00 0.00 37.13 4.93
941 1133 1.076632 CGCCAGAGGGAGGACTAGT 60.077 63.158 0.00 0.00 35.59 2.57
945 1137 1.079057 GTTTCGCCAGAGGGAGGAC 60.079 63.158 0.00 0.00 36.16 3.85
948 1140 1.301677 GCAAGTTTCGCCAGAGGGAG 61.302 60.000 0.00 0.00 36.16 4.30
950 1142 0.962356 ATGCAAGTTTCGCCAGAGGG 60.962 55.000 0.00 0.00 37.18 4.30
959 1151 4.762251 ACTTTGGAGTAGGATGCAAGTTTC 59.238 41.667 0.00 0.00 33.32 2.78
966 1158 3.350219 TTGGACTTTGGAGTAGGATGC 57.650 47.619 0.00 0.00 35.88 3.91
971 1163 3.146847 GTGGGTTTGGACTTTGGAGTAG 58.853 50.000 0.00 0.00 35.88 2.57
980 1172 0.401395 TCTGGAGGTGGGTTTGGACT 60.401 55.000 0.00 0.00 0.00 3.85
981 1173 0.476771 TTCTGGAGGTGGGTTTGGAC 59.523 55.000 0.00 0.00 0.00 4.02
982 1174 1.075374 CATTCTGGAGGTGGGTTTGGA 59.925 52.381 0.00 0.00 0.00 3.53
983 1175 1.549203 CATTCTGGAGGTGGGTTTGG 58.451 55.000 0.00 0.00 0.00 3.28
984 1176 1.549203 CCATTCTGGAGGTGGGTTTG 58.451 55.000 0.00 0.00 40.96 2.93
985 1177 0.251787 GCCATTCTGGAGGTGGGTTT 60.252 55.000 0.00 0.00 40.96 3.27
986 1178 1.384191 GCCATTCTGGAGGTGGGTT 59.616 57.895 0.00 0.00 40.96 4.11
987 1179 1.852157 TGCCATTCTGGAGGTGGGT 60.852 57.895 0.00 0.00 40.96 4.51
1009 1201 2.094390 TGGCAGCAGAAATCTTGCATTC 60.094 45.455 8.81 0.00 0.00 2.67
1050 1260 0.865111 GCACATATGACCGCGCATAA 59.135 50.000 10.38 0.00 34.67 1.90
1121 1331 1.538135 AAAGGGGTAGAGGCCACGT 60.538 57.895 5.01 0.00 36.93 4.49
1168 1378 0.386476 TTGCCGTATGGGTAGTAGCG 59.614 55.000 2.41 0.00 38.44 4.26
1170 1380 1.677576 TCGTTGCCGTATGGGTAGTAG 59.322 52.381 2.41 0.00 38.44 2.57
1180 1390 3.452755 AGAATCATCATCGTTGCCGTA 57.547 42.857 0.00 0.00 35.01 4.02
1229 1439 3.461061 TCTTCAGCATCGGCAGATTTAG 58.539 45.455 0.00 0.00 44.61 1.85
1288 1501 2.124695 GGGCACCGGTTCTCCATC 60.125 66.667 2.97 0.00 40.86 3.51
1375 1592 2.419851 CCTCCAGATCAGCCTTCTTGAC 60.420 54.545 0.00 0.00 0.00 3.18
1469 1686 1.404315 GCAGGTCGGTTAGAGGAACAG 60.404 57.143 0.00 0.00 40.09 3.16
1478 1695 2.345991 GCTGGTGCAGGTCGGTTA 59.654 61.111 0.00 0.00 39.41 2.85
1548 1765 0.679505 CCGAGAAACTCTGTCCACCA 59.320 55.000 0.00 0.00 0.00 4.17
1910 2129 0.693049 ATTGGACGGAGAAGCAAGGT 59.307 50.000 0.00 0.00 0.00 3.50
1998 2217 0.676736 GGAGGATTCCAGCTACGAGG 59.323 60.000 5.29 0.00 43.45 4.63
2107 2337 7.717875 TGGAAATGTAGCATAACCATTACTACC 59.282 37.037 0.00 0.00 33.79 3.18
2280 2521 7.212976 ACACCATCATCTAATAGTGCTACTTG 58.787 38.462 0.00 0.00 0.00 3.16
2283 2524 7.928706 AGAAACACCATCATCTAATAGTGCTAC 59.071 37.037 0.00 0.00 0.00 3.58
2284 2525 8.023021 AGAAACACCATCATCTAATAGTGCTA 57.977 34.615 0.00 0.00 0.00 3.49
2286 2527 7.559590 AAGAAACACCATCATCTAATAGTGC 57.440 36.000 0.00 0.00 0.00 4.40
2312 2553 6.741358 GCTAAACTGCTAATAACCGAACAAAG 59.259 38.462 0.00 0.00 0.00 2.77
2316 2557 5.350640 AGTGCTAAACTGCTAATAACCGAAC 59.649 40.000 0.00 0.00 37.88 3.95
2317 2558 5.484715 AGTGCTAAACTGCTAATAACCGAA 58.515 37.500 0.00 0.00 37.88 4.30
2325 2567 5.152623 AGACATGAGTGCTAAACTGCTAA 57.847 39.130 0.00 0.00 40.07 3.09
2326 2568 4.808414 AGACATGAGTGCTAAACTGCTA 57.192 40.909 0.00 0.00 40.07 3.49
2327 2569 3.692257 AGACATGAGTGCTAAACTGCT 57.308 42.857 0.00 0.00 40.07 4.24
2328 2570 4.499183 AGTAGACATGAGTGCTAAACTGC 58.501 43.478 0.00 0.00 40.07 4.40
2329 2571 6.183360 CGAAAGTAGACATGAGTGCTAAACTG 60.183 42.308 0.00 0.00 40.07 3.16
2330 2572 5.864474 CGAAAGTAGACATGAGTGCTAAACT 59.136 40.000 0.00 0.00 43.85 2.66
2331 2573 5.444745 GCGAAAGTAGACATGAGTGCTAAAC 60.445 44.000 0.00 0.00 0.00 2.01
2332 2574 4.625742 GCGAAAGTAGACATGAGTGCTAAA 59.374 41.667 0.00 0.00 0.00 1.85
2373 2615 4.022589 CCACAGACATGGCATCCATATTTC 60.023 45.833 0.00 0.00 43.15 2.17
2376 2618 2.712627 TCCACAGACATGGCATCCATAT 59.287 45.455 0.00 0.00 43.15 1.78
2387 2629 1.414181 GATCCCATCGTCCACAGACAT 59.586 52.381 0.00 0.00 43.73 3.06
2391 2633 1.208052 ACAAGATCCCATCGTCCACAG 59.792 52.381 0.00 0.00 0.00 3.66
2399 2641 6.375455 ACTGAATTACAACACAAGATCCCATC 59.625 38.462 0.00 0.00 0.00 3.51
2400 2642 6.248433 ACTGAATTACAACACAAGATCCCAT 58.752 36.000 0.00 0.00 0.00 4.00
2422 2789 2.543777 TCGGCTTAGTGCTTTCAACT 57.456 45.000 0.00 0.00 42.39 3.16
2426 2793 2.689646 AGACTTCGGCTTAGTGCTTTC 58.310 47.619 0.00 0.00 42.39 2.62
2481 2848 4.332828 AGGATTACGGCTTAGTGCTTTTT 58.667 39.130 0.00 0.00 42.39 1.94
2482 2849 3.939592 GAGGATTACGGCTTAGTGCTTTT 59.060 43.478 0.00 0.00 42.39 2.27
2483 2850 3.055385 TGAGGATTACGGCTTAGTGCTTT 60.055 43.478 0.00 0.00 42.39 3.51
2484 2851 2.500098 TGAGGATTACGGCTTAGTGCTT 59.500 45.455 0.00 0.00 42.39 3.91
2485 2852 2.108168 TGAGGATTACGGCTTAGTGCT 58.892 47.619 0.00 0.00 42.39 4.40
2486 2853 2.596904 TGAGGATTACGGCTTAGTGC 57.403 50.000 0.00 0.00 41.94 4.40
2487 2854 2.866762 GCTTGAGGATTACGGCTTAGTG 59.133 50.000 0.00 0.00 0.00 2.74
2488 2855 2.500098 TGCTTGAGGATTACGGCTTAGT 59.500 45.455 0.00 0.00 0.00 2.24
2489 2856 3.179443 TGCTTGAGGATTACGGCTTAG 57.821 47.619 0.00 0.00 0.00 2.18
2490 2857 3.838244 ATGCTTGAGGATTACGGCTTA 57.162 42.857 0.00 0.00 0.00 3.09
2491 2858 2.717639 ATGCTTGAGGATTACGGCTT 57.282 45.000 0.00 0.00 0.00 4.35
2492 2859 2.717639 AATGCTTGAGGATTACGGCT 57.282 45.000 0.00 0.00 34.24 5.52
2493 2860 3.782889 AAAATGCTTGAGGATTACGGC 57.217 42.857 0.00 0.00 34.94 5.68
2494 2861 9.398170 CAATATTAAAATGCTTGAGGATTACGG 57.602 33.333 0.00 0.00 34.94 4.02
2495 2862 9.950680 ACAATATTAAAATGCTTGAGGATTACG 57.049 29.630 0.00 0.00 34.94 3.18
2541 2908 3.244630 ACCAATGCCCGTCAAAACTAGTA 60.245 43.478 0.00 0.00 0.00 1.82
2542 2909 2.159382 CCAATGCCCGTCAAAACTAGT 58.841 47.619 0.00 0.00 0.00 2.57
2543 2910 2.159382 ACCAATGCCCGTCAAAACTAG 58.841 47.619 0.00 0.00 0.00 2.57
2583 2955 0.588252 CACAGCAACACTACCAGCAC 59.412 55.000 0.00 0.00 0.00 4.40
2595 2967 1.955778 AGCATAACAAGTGCACAGCAA 59.044 42.857 21.04 3.27 44.87 3.91
2616 2988 2.523168 AAACAACCCGGCCCCAAG 60.523 61.111 0.00 0.00 0.00 3.61
2623 2995 0.753848 ACTGAACCCAAACAACCCGG 60.754 55.000 0.00 0.00 0.00 5.73
2624 2996 1.107945 AACTGAACCCAAACAACCCG 58.892 50.000 0.00 0.00 0.00 5.28
2625 2997 3.620427 AAAACTGAACCCAAACAACCC 57.380 42.857 0.00 0.00 0.00 4.11
2626 2998 4.403113 TCCTAAAACTGAACCCAAACAACC 59.597 41.667 0.00 0.00 0.00 3.77
2648 3020 9.946165 TTCTTTTCTCCTTTAAAATCGAGTTTC 57.054 29.630 14.90 0.00 0.00 2.78
2698 3070 0.737715 GAACTGCCCTAGTCGTGCTG 60.738 60.000 0.00 0.00 39.18 4.41
2704 3076 2.300437 AGACAACAGAACTGCCCTAGTC 59.700 50.000 1.46 3.88 39.18 2.59
2712 3084 6.646653 TCTGTATTTAGCAGACAACAGAACTG 59.353 38.462 8.28 0.00 40.10 3.16
2761 3141 3.093814 TGTACTCAGATTGTTCGCCCTA 58.906 45.455 0.00 0.00 0.00 3.53
2785 3165 9.468532 GCAACAAGAGATTTGAAGATAGTTTTT 57.531 29.630 0.00 0.00 0.00 1.94
2792 3172 4.074970 ACCGCAACAAGAGATTTGAAGAT 58.925 39.130 0.00 0.00 0.00 2.40
2801 3181 0.892755 ATACCGACCGCAACAAGAGA 59.107 50.000 0.00 0.00 0.00 3.10
2802 3182 2.572191 TATACCGACCGCAACAAGAG 57.428 50.000 0.00 0.00 0.00 2.85
2803 3183 3.450578 GATTATACCGACCGCAACAAGA 58.549 45.455 0.00 0.00 0.00 3.02
2804 3184 2.217847 CGATTATACCGACCGCAACAAG 59.782 50.000 0.00 0.00 0.00 3.16
2805 3185 2.195096 CGATTATACCGACCGCAACAA 58.805 47.619 0.00 0.00 0.00 2.83
2807 3187 1.134226 CCGATTATACCGACCGCAAC 58.866 55.000 0.00 0.00 0.00 4.17
2808 3188 0.598158 GCCGATTATACCGACCGCAA 60.598 55.000 0.00 0.00 0.00 4.85
2809 3189 1.007038 GCCGATTATACCGACCGCA 60.007 57.895 0.00 0.00 0.00 5.69
2810 3190 2.084681 CGCCGATTATACCGACCGC 61.085 63.158 0.00 0.00 0.00 5.68
2811 3191 0.318107 AACGCCGATTATACCGACCG 60.318 55.000 0.00 0.00 0.00 4.79
2812 3192 1.269206 TGAACGCCGATTATACCGACC 60.269 52.381 0.00 0.00 0.00 4.79
2813 3193 2.049228 CTGAACGCCGATTATACCGAC 58.951 52.381 0.00 0.00 0.00 4.79
2814 3194 1.001048 CCTGAACGCCGATTATACCGA 60.001 52.381 0.00 0.00 0.00 4.69
2815 3195 1.269413 ACCTGAACGCCGATTATACCG 60.269 52.381 0.00 0.00 0.00 4.02
2821 3203 0.244450 TAACGACCTGAACGCCGATT 59.756 50.000 0.00 0.00 0.00 3.34
2824 3206 2.430942 CGTAACGACCTGAACGCCG 61.431 63.158 0.00 0.00 0.00 6.46
2873 3255 6.112734 ACCAGAAAGTATGTGCAATCGATTA 58.887 36.000 10.97 0.00 0.00 1.75
2877 3259 3.684305 TGACCAGAAAGTATGTGCAATCG 59.316 43.478 0.00 0.00 0.00 3.34
2879 3261 3.436704 CGTGACCAGAAAGTATGTGCAAT 59.563 43.478 0.00 0.00 0.00 3.56
2881 3263 2.412870 CGTGACCAGAAAGTATGTGCA 58.587 47.619 0.00 0.00 0.00 4.57
2882 3264 1.128692 GCGTGACCAGAAAGTATGTGC 59.871 52.381 0.00 0.00 0.00 4.57
2889 3325 1.487231 CGTTCGCGTGACCAGAAAG 59.513 57.895 5.77 0.00 35.57 2.62
2902 3338 1.082117 ATTAGCCAGGTTCGCGTTCG 61.082 55.000 5.77 0.00 0.00 3.95
2907 3343 1.173913 AACCAATTAGCCAGGTTCGC 58.826 50.000 0.00 0.00 41.60 4.70
2948 3384 3.365265 GGCACGGCCCTTCTTGTG 61.365 66.667 0.00 0.00 44.06 3.33
2966 3402 3.252458 GGCTACACCTTTCAACGACAAAT 59.748 43.478 0.00 0.00 34.51 2.32
2988 3424 5.470437 GGAGTAAAACTTTTCACCTCCAGAG 59.530 44.000 15.89 0.00 0.00 3.35
3015 3451 6.844097 ATTGAGCCTTATAAACCGGAAAAA 57.156 33.333 9.46 0.00 0.00 1.94
3016 3452 6.434652 TGAATTGAGCCTTATAAACCGGAAAA 59.565 34.615 9.46 0.00 0.00 2.29
3017 3453 5.946972 TGAATTGAGCCTTATAAACCGGAAA 59.053 36.000 9.46 0.00 0.00 3.13
3018 3454 5.502079 TGAATTGAGCCTTATAAACCGGAA 58.498 37.500 9.46 0.00 0.00 4.30
3019 3455 5.105567 TGAATTGAGCCTTATAAACCGGA 57.894 39.130 9.46 0.00 0.00 5.14
3020 3456 5.828299 TTGAATTGAGCCTTATAAACCGG 57.172 39.130 0.00 0.00 0.00 5.28
3021 3457 8.702163 ATTTTTGAATTGAGCCTTATAAACCG 57.298 30.769 0.00 0.00 0.00 4.44
3022 3458 9.875691 AGATTTTTGAATTGAGCCTTATAAACC 57.124 29.630 0.00 0.00 0.00 3.27
3026 3462 8.686334 GGTGAGATTTTTGAATTGAGCCTTATA 58.314 33.333 0.00 0.00 0.00 0.98
3027 3463 7.178983 TGGTGAGATTTTTGAATTGAGCCTTAT 59.821 33.333 0.00 0.00 0.00 1.73
3028 3464 6.493115 TGGTGAGATTTTTGAATTGAGCCTTA 59.507 34.615 0.00 0.00 0.00 2.69
3029 3465 5.305128 TGGTGAGATTTTTGAATTGAGCCTT 59.695 36.000 0.00 0.00 0.00 4.35
3030 3466 4.834496 TGGTGAGATTTTTGAATTGAGCCT 59.166 37.500 0.00 0.00 0.00 4.58
3031 3467 5.138125 TGGTGAGATTTTTGAATTGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
3032 3468 5.406477 GGTTGGTGAGATTTTTGAATTGAGC 59.594 40.000 0.00 0.00 0.00 4.26
3033 3469 6.514947 TGGTTGGTGAGATTTTTGAATTGAG 58.485 36.000 0.00 0.00 0.00 3.02
3034 3470 6.477053 TGGTTGGTGAGATTTTTGAATTGA 57.523 33.333 0.00 0.00 0.00 2.57
3035 3471 6.203338 CCTTGGTTGGTGAGATTTTTGAATTG 59.797 38.462 0.00 0.00 0.00 2.32
3036 3472 6.126796 ACCTTGGTTGGTGAGATTTTTGAATT 60.127 34.615 0.00 0.00 39.17 2.17
3037 3473 5.366477 ACCTTGGTTGGTGAGATTTTTGAAT 59.634 36.000 0.00 0.00 39.17 2.57
3038 3474 4.714308 ACCTTGGTTGGTGAGATTTTTGAA 59.286 37.500 0.00 0.00 39.17 2.69
3039 3475 4.285863 ACCTTGGTTGGTGAGATTTTTGA 58.714 39.130 0.00 0.00 39.17 2.69
3040 3476 4.670896 ACCTTGGTTGGTGAGATTTTTG 57.329 40.909 0.00 0.00 39.17 2.44
3041 3477 5.701224 TCTACCTTGGTTGGTGAGATTTTT 58.299 37.500 0.00 0.00 41.05 1.94
3042 3478 5.319043 TCTACCTTGGTTGGTGAGATTTT 57.681 39.130 0.00 0.00 41.05 1.82
3043 3479 4.993705 TCTACCTTGGTTGGTGAGATTT 57.006 40.909 0.00 0.00 41.05 2.17
3044 3480 4.324563 CCATCTACCTTGGTTGGTGAGATT 60.325 45.833 14.37 0.00 41.05 2.40
3045 3481 3.200825 CCATCTACCTTGGTTGGTGAGAT 59.799 47.826 14.37 6.22 41.05 2.75
3046 3482 2.571653 CCATCTACCTTGGTTGGTGAGA 59.428 50.000 14.37 4.26 41.05 3.27
3047 3483 2.991250 CCATCTACCTTGGTTGGTGAG 58.009 52.381 14.37 3.30 41.05 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.