Multiple sequence alignment - TraesCS5A01G430600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G430600 chr5A 100.000 2579 0 0 1 2579 614357837 614360415 0.000000e+00 4763
1 TraesCS5A01G430600 chr5A 77.737 539 88 25 993 1517 613462230 613461710 4.170000e-78 302
2 TraesCS5A01G430600 chr5B 89.732 1792 106 38 1 1734 606833934 606835705 0.000000e+00 2218
3 TraesCS5A01G430600 chr5B 91.628 872 38 19 901 1742 606843032 606843898 0.000000e+00 1173
4 TraesCS5A01G430600 chr5B 93.772 578 16 7 331 888 606838361 606838938 0.000000e+00 850
5 TraesCS5A01G430600 chr5B 85.246 244 36 0 1274 1517 605526476 605526233 4.260000e-63 252
6 TraesCS5A01G430600 chr5B 84.434 212 22 6 972 1179 605526818 605526614 5.630000e-47 198
7 TraesCS5A01G430600 chr5D 91.906 1532 96 19 373 1895 491786202 491787714 0.000000e+00 2117
8 TraesCS5A01G430600 chr5D 85.830 247 35 0 1271 1517 490973156 490972910 1.970000e-66 263
9 TraesCS5A01G430600 chr3B 91.688 385 32 0 1935 2319 795445163 795445547 3.780000e-148 534
10 TraesCS5A01G430600 chr3B 99.234 261 2 0 2318 2578 168523811 168523551 3.000000e-129 472
11 TraesCS5A01G430600 chr7A 90.909 385 35 0 1935 2319 122499428 122499044 3.800000e-143 518
12 TraesCS5A01G430600 chr6D 90.130 385 38 0 1935 2319 219430939 219431323 3.830000e-138 501
13 TraesCS5A01G430600 chr6D 96.604 265 9 0 2315 2579 151317476 151317212 8.470000e-120 440
14 TraesCS5A01G430600 chr3A 89.973 369 37 0 1951 2319 721820485 721820853 6.460000e-131 477
15 TraesCS5A01G430600 chr7B 88.831 385 43 0 1935 2319 739470444 739470828 8.350000e-130 473
16 TraesCS5A01G430600 chr7B 96.578 263 9 0 2317 2579 464539691 464539953 1.100000e-118 436
17 TraesCS5A01G430600 chr7B 96.565 262 8 1 2318 2579 713286188 713286448 1.420000e-117 433
18 TraesCS5A01G430600 chr6B 96.269 268 9 1 2311 2578 583189239 583188973 3.050000e-119 438
19 TraesCS5A01G430600 chr1D 95.926 270 10 1 2311 2579 153918993 153918724 1.100000e-118 436
20 TraesCS5A01G430600 chr2B 96.226 265 10 0 2314 2578 475256403 475256667 3.940000e-118 435
21 TraesCS5A01G430600 chr4B 95.865 266 11 0 2311 2576 418510715 418510980 5.100000e-117 431
22 TraesCS5A01G430600 chr3D 95.185 270 13 0 2310 2579 421266362 421266631 6.590000e-116 427
23 TraesCS5A01G430600 chr6A 93.711 159 10 0 2161 2319 448049069 448048911 3.320000e-59 239
24 TraesCS5A01G430600 chr7D 94.495 109 6 0 2211 2319 610529585 610529693 4.410000e-38 169


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G430600 chr5A 614357837 614360415 2578 False 4763 4763 100.000 1 2579 1 chr5A.!!$F1 2578
1 TraesCS5A01G430600 chr5A 613461710 613462230 520 True 302 302 77.737 993 1517 1 chr5A.!!$R1 524
2 TraesCS5A01G430600 chr5B 606833934 606838938 5004 False 1534 2218 91.752 1 1734 2 chr5B.!!$F2 1733
3 TraesCS5A01G430600 chr5B 606843032 606843898 866 False 1173 1173 91.628 901 1742 1 chr5B.!!$F1 841
4 TraesCS5A01G430600 chr5B 605526233 605526818 585 True 225 252 84.840 972 1517 2 chr5B.!!$R1 545
5 TraesCS5A01G430600 chr5D 491786202 491787714 1512 False 2117 2117 91.906 373 1895 1 chr5D.!!$F1 1522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
99 100 0.030638 CAACCAAGTGGCGTCCTTTG 59.969 55.0 0.0 0.0 39.32 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2008 2962 0.031917 TTCCCGTACCTGCTATCCCA 60.032 55.0 0.0 0.0 0.0 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.873591 ACTTGGAATGTTGCGAGACAC 59.126 47.619 8.30 0.00 34.46 3.67
26 27 1.144969 GAATGTTGCGAGACACCGAA 58.855 50.000 0.00 0.00 31.30 4.30
27 28 1.529438 GAATGTTGCGAGACACCGAAA 59.471 47.619 0.00 0.00 31.30 3.46
28 29 1.588674 ATGTTGCGAGACACCGAAAA 58.411 45.000 0.00 0.00 31.30 2.29
29 30 0.934496 TGTTGCGAGACACCGAAAAG 59.066 50.000 0.00 0.00 0.00 2.27
30 31 0.384353 GTTGCGAGACACCGAAAAGC 60.384 55.000 0.00 0.00 0.00 3.51
45 46 6.253512 CACCGAAAAGCTTTTCCAATAATAGC 59.746 38.462 34.88 15.39 42.66 2.97
99 100 0.030638 CAACCAAGTGGCGTCCTTTG 59.969 55.000 0.00 0.00 39.32 2.77
100 101 0.395173 AACCAAGTGGCGTCCTTTGT 60.395 50.000 0.00 0.00 39.32 2.83
105 106 1.593209 GTGGCGTCCTTTGTCGTCA 60.593 57.895 0.00 0.00 39.31 4.35
133 134 9.643693 AAATCTTGCGTATCTTTTCATTGATTT 57.356 25.926 0.00 0.00 0.00 2.17
150 151 6.839124 TTGATTTGTTACAATGGCTGATCT 57.161 33.333 0.00 0.00 0.00 2.75
171 172 5.762045 TCTTTTTGTGCATTCTCTAGCAAC 58.238 37.500 0.00 0.00 43.20 4.17
205 206 6.484977 GGAGATCACAAAATTAGAGGACCATC 59.515 42.308 0.00 0.00 0.00 3.51
221 222 8.383175 AGAGGACCATCACAATTAAACTAGAAA 58.617 33.333 0.00 0.00 0.00 2.52
222 223 8.934023 AGGACCATCACAATTAAACTAGAAAA 57.066 30.769 0.00 0.00 0.00 2.29
251 252 8.680903 AGTGAATTTAAGGAAGCATCTTGTATG 58.319 33.333 0.00 0.00 0.00 2.39
259 260 4.024556 GGAAGCATCTTGTATGATTGGACG 60.025 45.833 0.00 0.00 0.00 4.79
261 262 4.769688 AGCATCTTGTATGATTGGACGAA 58.230 39.130 0.00 0.00 0.00 3.85
263 264 5.237996 AGCATCTTGTATGATTGGACGAATG 59.762 40.000 0.00 0.00 0.00 2.67
265 266 6.653183 CATCTTGTATGATTGGACGAATGTC 58.347 40.000 0.00 0.00 44.72 3.06
268 269 7.552459 TCTTGTATGATTGGACGAATGTCTTA 58.448 34.615 0.00 0.00 44.83 2.10
269 270 8.204160 TCTTGTATGATTGGACGAATGTCTTAT 58.796 33.333 0.00 0.00 44.83 1.73
270 271 7.946655 TGTATGATTGGACGAATGTCTTATC 57.053 36.000 0.00 0.74 44.83 1.75
274 275 7.307493 TGATTGGACGAATGTCTTATCTTTG 57.693 36.000 0.00 0.00 44.83 2.77
277 278 8.786826 ATTGGACGAATGTCTTATCTTTGTTA 57.213 30.769 0.00 0.00 44.83 2.41
280 281 9.878667 TGGACGAATGTCTTATCTTTGTTATTA 57.121 29.630 0.00 0.00 44.83 0.98
427 456 9.823098 CTAAGATAAGCTTAGCATAATTTGCAG 57.177 33.333 22.80 0.91 46.84 4.41
447 476 4.343814 GCAGGAAGACTAAATCTAGCCTCT 59.656 45.833 0.00 0.00 39.28 3.69
536 565 6.300354 TCTCCAAAGAGAAACAAAATCGAC 57.700 37.500 0.00 0.00 46.33 4.20
542 571 6.787085 AAGAGAAACAAAATCGACCAGTAG 57.213 37.500 0.00 0.00 0.00 2.57
544 573 6.289064 AGAGAAACAAAATCGACCAGTAGTT 58.711 36.000 0.00 0.00 0.00 2.24
588 617 5.269991 AGAGCCAGTGTAAACATAGAGGTA 58.730 41.667 0.00 0.00 0.00 3.08
590 619 4.775780 AGCCAGTGTAAACATAGAGGTACA 59.224 41.667 0.00 0.00 0.00 2.90
719 758 1.940613 GTCTGGCGAAAGTGTCAAACT 59.059 47.619 0.00 0.00 42.60 2.66
766 805 1.138247 GGCTGCAAAGGAAGATGCG 59.862 57.895 0.50 0.00 45.47 4.73
920 959 6.142139 TGTGTGCTTTAATTTGTTCTCATCG 58.858 36.000 0.00 0.00 0.00 3.84
983 1022 8.535690 AATAGGAAGAAGTAGTTTGAGTTTCG 57.464 34.615 0.00 0.00 0.00 3.46
1036 1077 4.634703 TTGTCGTGGCGGTGGCAT 62.635 61.111 0.00 0.00 40.92 4.40
1242 1302 4.601019 CACAAACGAGATTGAACTGCTTT 58.399 39.130 0.00 0.00 34.38 3.51
1578 1690 1.408969 GGCCCTTTGTTTCCAAGTGA 58.591 50.000 0.00 0.00 0.00 3.41
1640 1758 4.765281 CGTTGTTCGTGTCTGTTCTTTA 57.235 40.909 0.00 0.00 34.52 1.85
1659 1778 0.596577 ACTAGTCACATCGTGCACGT 59.403 50.000 35.74 21.74 40.80 4.49
1660 1779 1.808343 ACTAGTCACATCGTGCACGTA 59.192 47.619 35.74 23.61 40.80 3.57
1661 1780 2.174764 CTAGTCACATCGTGCACGTAC 58.825 52.381 35.74 24.84 40.80 3.67
1662 1781 0.728129 AGTCACATCGTGCACGTACG 60.728 55.000 35.74 26.27 44.98 3.67
1687 1810 3.959293 TGATCAATCACACTGCTGGATT 58.041 40.909 0.00 0.00 0.00 3.01
1706 1829 5.163141 TGGATTCATGTAATGTTCCCCGTAT 60.163 40.000 0.00 0.00 46.80 3.06
1726 1849 7.227461 CCGTATCATGACGATTTATTAGTTGC 58.773 38.462 8.40 0.00 45.82 4.17
1736 1859 5.108705 CGATTTATTAGTTGCTCGACTCGTC 60.109 44.000 0.00 0.00 0.00 4.20
1748 2518 7.677454 TGCTCGACTCGTCCTATATAAATTA 57.323 36.000 0.00 0.00 0.00 1.40
1758 2528 9.747898 TCGTCCTATATAAATTAAATTGCCCAT 57.252 29.630 0.00 0.00 0.00 4.00
1774 2550 9.683870 AAATTGCCCATTAATATTGTTGTTGAT 57.316 25.926 0.00 0.00 0.00 2.57
1775 2551 8.891671 ATTGCCCATTAATATTGTTGTTGATC 57.108 30.769 0.00 0.00 0.00 2.92
1776 2552 6.815089 TGCCCATTAATATTGTTGTTGATCC 58.185 36.000 0.00 0.00 0.00 3.36
1777 2553 5.920273 GCCCATTAATATTGTTGTTGATCCG 59.080 40.000 0.00 0.00 0.00 4.18
1778 2554 6.446318 CCCATTAATATTGTTGTTGATCCGG 58.554 40.000 0.00 0.00 0.00 5.14
1779 2555 6.446318 CCATTAATATTGTTGTTGATCCGGG 58.554 40.000 0.00 0.00 0.00 5.73
1822 2599 0.260816 ACCTCCCGTGCCTGTATCTA 59.739 55.000 0.00 0.00 0.00 1.98
1823 2600 1.133136 ACCTCCCGTGCCTGTATCTAT 60.133 52.381 0.00 0.00 0.00 1.98
1824 2601 2.109480 ACCTCCCGTGCCTGTATCTATA 59.891 50.000 0.00 0.00 0.00 1.31
1829 2606 3.572682 CCCGTGCCTGTATCTATAGTTCA 59.427 47.826 0.00 0.00 0.00 3.18
1872 2650 6.374333 TCACCAAAAATGCTAGGAGACATTAC 59.626 38.462 0.00 0.00 35.49 1.89
1881 2835 7.956328 TGCTAGGAGACATTACTCTAGAAAA 57.044 36.000 0.00 0.00 37.13 2.29
1895 2849 5.221722 ACTCTAGAAAATTCCTGTGCACTGA 60.222 40.000 23.75 14.57 0.00 3.41
1897 2851 6.061441 TCTAGAAAATTCCTGTGCACTGAAA 58.939 36.000 23.75 11.69 0.00 2.69
1898 2852 5.796424 AGAAAATTCCTGTGCACTGAAAT 57.204 34.783 23.75 13.60 0.00 2.17
1899 2853 6.165700 AGAAAATTCCTGTGCACTGAAATT 57.834 33.333 23.75 18.63 0.00 1.82
1900 2854 6.585416 AGAAAATTCCTGTGCACTGAAATTT 58.415 32.000 22.16 22.16 0.00 1.82
1901 2855 6.703165 AGAAAATTCCTGTGCACTGAAATTTC 59.297 34.615 30.63 30.63 0.00 2.17
1902 2856 3.624326 TTCCTGTGCACTGAAATTTCG 57.376 42.857 23.75 10.36 0.00 3.46
1903 2857 2.844946 TCCTGTGCACTGAAATTTCGA 58.155 42.857 23.75 8.62 0.00 3.71
1904 2858 2.807967 TCCTGTGCACTGAAATTTCGAG 59.192 45.455 23.75 13.14 0.00 4.04
1906 2860 1.069973 TGTGCACTGAAATTTCGAGCG 60.070 47.619 19.41 7.31 0.00 5.03
1907 2861 0.110238 TGCACTGAAATTTCGAGCGC 60.110 50.000 13.34 15.47 0.00 5.92
1908 2862 0.110238 GCACTGAAATTTCGAGCGCA 60.110 50.000 11.47 0.00 0.00 6.09
1911 2865 1.195448 ACTGAAATTTCGAGCGCACTG 59.805 47.619 11.47 0.00 0.00 3.66
1912 2866 0.516877 TGAAATTTCGAGCGCACTGG 59.483 50.000 11.47 0.00 0.00 4.00
1915 2869 2.024176 AATTTCGAGCGCACTGGTAT 57.976 45.000 11.47 0.00 0.00 2.73
1916 2870 1.290203 ATTTCGAGCGCACTGGTATG 58.710 50.000 11.47 0.00 0.00 2.39
1920 2874 0.100682 CGAGCGCACTGGTATGTACT 59.899 55.000 11.47 0.00 0.00 2.73
1923 2877 0.174845 GCGCACTGGTATGTACTCCA 59.825 55.000 0.30 0.00 0.00 3.86
1924 2878 1.202533 GCGCACTGGTATGTACTCCAT 60.203 52.381 0.30 0.00 37.58 3.41
1925 2879 2.035449 GCGCACTGGTATGTACTCCATA 59.965 50.000 0.30 0.00 34.86 2.74
1927 2881 4.049186 CGCACTGGTATGTACTCCATAAC 58.951 47.826 0.00 0.00 43.00 1.89
1928 2882 4.377897 GCACTGGTATGTACTCCATAACC 58.622 47.826 0.00 0.00 42.18 2.85
1929 2883 4.742743 GCACTGGTATGTACTCCATAACCC 60.743 50.000 0.00 0.00 42.18 4.11
1930 2884 4.407621 CACTGGTATGTACTCCATAACCCA 59.592 45.833 0.00 0.00 42.18 4.51
1931 2885 5.071788 CACTGGTATGTACTCCATAACCCAT 59.928 44.000 0.00 0.00 42.18 4.00
1933 2887 6.182507 TGGTATGTACTCCATAACCCATTC 57.817 41.667 0.00 0.00 42.18 2.67
1934 2888 5.072600 TGGTATGTACTCCATAACCCATTCC 59.927 44.000 0.00 0.00 42.18 3.01
1936 2890 2.436542 TGTACTCCATAACCCATTCCCG 59.563 50.000 0.00 0.00 0.00 5.14
1937 2891 1.887797 ACTCCATAACCCATTCCCGA 58.112 50.000 0.00 0.00 0.00 5.14
1938 2892 1.489230 ACTCCATAACCCATTCCCGAC 59.511 52.381 0.00 0.00 0.00 4.79
1939 2893 0.841289 TCCATAACCCATTCCCGACC 59.159 55.000 0.00 0.00 0.00 4.79
1940 2894 0.843984 CCATAACCCATTCCCGACCT 59.156 55.000 0.00 0.00 0.00 3.85
1941 2895 1.476833 CCATAACCCATTCCCGACCTG 60.477 57.143 0.00 0.00 0.00 4.00
1944 2898 2.075355 AACCCATTCCCGACCTGCAA 62.075 55.000 0.00 0.00 0.00 4.08
1947 2901 1.308069 CCATTCCCGACCTGCAACTG 61.308 60.000 0.00 0.00 0.00 3.16
1948 2902 1.002134 ATTCCCGACCTGCAACTGG 60.002 57.895 0.00 0.00 0.00 4.00
1950 2904 2.046892 CCCGACCTGCAACTGGAG 60.047 66.667 0.00 0.00 0.00 3.86
1951 2905 2.743718 CCGACCTGCAACTGGAGT 59.256 61.111 0.00 0.00 0.00 3.85
1954 2908 1.003233 GACCTGCAACTGGAGTCCC 60.003 63.158 6.74 0.00 0.00 4.46
1955 2909 2.352805 CCTGCAACTGGAGTCCCC 59.647 66.667 6.74 0.00 0.00 4.81
1956 2910 2.227036 CCTGCAACTGGAGTCCCCT 61.227 63.158 6.74 0.00 35.38 4.79
1957 2911 1.002868 CTGCAACTGGAGTCCCCTG 60.003 63.158 6.74 2.25 39.53 4.45
1958 2912 2.360475 GCAACTGGAGTCCCCTGC 60.360 66.667 6.74 9.01 37.38 4.85
1959 2913 2.352805 CAACTGGAGTCCCCTGCC 59.647 66.667 6.74 0.00 37.38 4.85
1960 2914 3.322466 AACTGGAGTCCCCTGCCG 61.322 66.667 6.74 0.00 37.38 5.69
1965 2919 3.775654 GAGTCCCCTGCCGGTGAG 61.776 72.222 1.90 0.00 0.00 3.51
1990 2944 0.379669 CGAAGCTGAATGTGGATGGC 59.620 55.000 0.00 0.00 0.00 4.40
1991 2945 1.760192 GAAGCTGAATGTGGATGGCT 58.240 50.000 0.00 0.00 0.00 4.75
1992 2946 1.674962 GAAGCTGAATGTGGATGGCTC 59.325 52.381 0.00 0.00 0.00 4.70
1993 2947 0.917533 AGCTGAATGTGGATGGCTCT 59.082 50.000 0.00 0.00 0.00 4.09
1995 2949 2.097825 GCTGAATGTGGATGGCTCTTT 58.902 47.619 0.00 0.00 0.00 2.52
1996 2950 2.098770 GCTGAATGTGGATGGCTCTTTC 59.901 50.000 0.00 0.00 0.00 2.62
1997 2951 3.349927 CTGAATGTGGATGGCTCTTTCA 58.650 45.455 0.00 0.00 0.00 2.69
1998 2952 3.760151 CTGAATGTGGATGGCTCTTTCAA 59.240 43.478 0.00 0.00 0.00 2.69
1999 2953 4.346730 TGAATGTGGATGGCTCTTTCAAT 58.653 39.130 0.00 0.00 0.00 2.57
2000 2954 4.400251 TGAATGTGGATGGCTCTTTCAATC 59.600 41.667 0.00 0.00 0.00 2.67
2002 2956 2.041485 TGTGGATGGCTCTTTCAATCCA 59.959 45.455 0.00 0.00 36.01 3.41
2003 2957 2.686915 GTGGATGGCTCTTTCAATCCAG 59.313 50.000 3.52 0.00 38.68 3.86
2004 2958 2.577563 TGGATGGCTCTTTCAATCCAGA 59.422 45.455 0.00 0.00 33.71 3.86
2008 2962 4.581309 TGGCTCTTTCAATCCAGAAGAT 57.419 40.909 0.00 0.00 36.48 2.40
2009 2963 4.267536 TGGCTCTTTCAATCCAGAAGATG 58.732 43.478 0.00 0.00 34.56 2.90
2019 2973 2.855209 CCAGAAGATGGGATAGCAGG 57.145 55.000 0.00 0.00 46.36 4.85
2020 2974 2.053244 CCAGAAGATGGGATAGCAGGT 58.947 52.381 0.00 0.00 46.36 4.00
2022 2976 3.007398 CCAGAAGATGGGATAGCAGGTAC 59.993 52.174 0.00 0.00 46.36 3.34
2023 2977 2.894126 AGAAGATGGGATAGCAGGTACG 59.106 50.000 0.00 0.00 0.00 3.67
2024 2978 1.633774 AGATGGGATAGCAGGTACGG 58.366 55.000 0.00 0.00 0.00 4.02
2025 2979 0.608640 GATGGGATAGCAGGTACGGG 59.391 60.000 0.00 0.00 0.00 5.28
2026 2980 0.190069 ATGGGATAGCAGGTACGGGA 59.810 55.000 0.00 0.00 0.00 5.14
2027 2981 0.031917 TGGGATAGCAGGTACGGGAA 60.032 55.000 0.00 0.00 0.00 3.97
2028 2982 1.349067 GGGATAGCAGGTACGGGAAT 58.651 55.000 0.00 0.00 0.00 3.01
2029 2983 1.002087 GGGATAGCAGGTACGGGAATG 59.998 57.143 0.00 0.00 0.00 2.67
2032 2986 0.828022 TAGCAGGTACGGGAATGGTG 59.172 55.000 0.00 0.00 0.00 4.17
2034 2988 1.451387 CAGGTACGGGAATGGTGCC 60.451 63.158 0.00 0.00 40.07 5.01
2040 2994 4.041762 GGGAATGGTGCCGTGGGA 62.042 66.667 0.00 0.00 0.00 4.37
2041 2995 2.750237 GGAATGGTGCCGTGGGAC 60.750 66.667 1.35 1.35 35.66 4.46
2047 3001 3.771978 GTGCCGTGGGACCAAAAT 58.228 55.556 0.00 0.00 0.00 1.82
2048 3002 1.288752 GTGCCGTGGGACCAAAATG 59.711 57.895 0.00 0.00 0.00 2.32
2049 3003 1.905843 TGCCGTGGGACCAAAATGG 60.906 57.895 0.00 0.00 45.02 3.16
2051 3005 2.566010 CGTGGGACCAAAATGGCG 59.434 61.111 0.00 0.00 42.67 5.69
2052 3006 1.969064 CGTGGGACCAAAATGGCGA 60.969 57.895 0.00 0.00 42.67 5.54
2053 3007 1.584495 GTGGGACCAAAATGGCGAC 59.416 57.895 0.00 0.00 42.67 5.19
2054 3008 1.151679 TGGGACCAAAATGGCGACA 59.848 52.632 0.00 0.00 42.67 4.35
2080 3034 3.389925 TTTTTGGCTTGCAGATCCTTG 57.610 42.857 0.00 0.00 0.00 3.61
2082 3036 1.250328 TTGGCTTGCAGATCCTTGTG 58.750 50.000 0.00 0.00 0.00 3.33
2083 3037 0.609957 TGGCTTGCAGATCCTTGTGG 60.610 55.000 0.00 0.00 0.00 4.17
2084 3038 1.509923 GCTTGCAGATCCTTGTGGC 59.490 57.895 0.00 0.00 0.00 5.01
2086 3040 0.809385 CTTGCAGATCCTTGTGGCTG 59.191 55.000 0.00 0.00 0.00 4.85
2101 3055 4.431131 CTGTGCCCGGATGCCCTT 62.431 66.667 0.73 0.00 0.00 3.95
2102 3056 4.424711 TGTGCCCGGATGCCCTTC 62.425 66.667 0.73 0.00 0.00 3.46
2103 3057 4.424711 GTGCCCGGATGCCCTTCA 62.425 66.667 0.73 0.00 0.00 3.02
2105 3059 2.908940 GCCCGGATGCCCTTCATG 60.909 66.667 0.73 0.00 35.05 3.07
2107 3061 2.124193 CCGGATGCCCTTCATGCA 60.124 61.111 0.00 0.00 42.87 3.96
2108 3062 2.191513 CCGGATGCCCTTCATGCAG 61.192 63.158 0.00 0.00 42.87 4.41
2110 3064 1.164662 CGGATGCCCTTCATGCAGAG 61.165 60.000 0.00 0.00 42.87 3.35
2111 3065 1.453762 GGATGCCCTTCATGCAGAGC 61.454 60.000 0.00 0.00 42.92 4.09
2112 3066 1.783031 GATGCCCTTCATGCAGAGCG 61.783 60.000 0.00 0.00 42.92 5.03
2113 3067 2.437359 GCCCTTCATGCAGAGCGT 60.437 61.111 0.00 0.00 0.00 5.07
2134 3088 2.509052 CAGGATGCATGAAATGGCTG 57.491 50.000 2.46 0.00 46.86 4.85
2135 3089 1.068588 CAGGATGCATGAAATGGCTGG 59.931 52.381 2.46 0.00 46.86 4.85
2136 3090 0.249741 GGATGCATGAAATGGCTGGC 60.250 55.000 2.46 0.00 46.86 4.85
2138 3092 0.750850 ATGCATGAAATGGCTGGCTC 59.249 50.000 0.00 0.00 46.86 4.70
2139 3093 0.323999 TGCATGAAATGGCTGGCTCT 60.324 50.000 0.00 0.00 46.86 4.09
2140 3094 1.064537 TGCATGAAATGGCTGGCTCTA 60.065 47.619 0.00 0.00 46.86 2.43
2141 3095 1.607628 GCATGAAATGGCTGGCTCTAG 59.392 52.381 0.00 0.00 46.86 2.43
2142 3096 1.607628 CATGAAATGGCTGGCTCTAGC 59.392 52.381 2.00 0.00 41.79 3.42
2143 3097 0.620030 TGAAATGGCTGGCTCTAGCA 59.380 50.000 7.51 0.00 45.46 3.49
2144 3098 1.020437 GAAATGGCTGGCTCTAGCAC 58.980 55.000 7.51 0.00 45.46 4.40
2145 3099 0.329261 AAATGGCTGGCTCTAGCACA 59.671 50.000 7.51 3.75 45.46 4.57
2146 3100 0.393537 AATGGCTGGCTCTAGCACAC 60.394 55.000 7.51 0.00 45.46 3.82
2147 3101 2.124942 GGCTGGCTCTAGCACACC 60.125 66.667 7.51 0.00 45.46 4.16
2148 3102 2.665000 GCTGGCTCTAGCACACCA 59.335 61.111 4.07 0.00 43.17 4.17
2149 3103 1.003355 GCTGGCTCTAGCACACCAA 60.003 57.895 4.07 0.00 43.17 3.67
2151 3105 1.376543 CTGGCTCTAGCACACCAATG 58.623 55.000 4.07 0.00 44.36 2.82
2152 3106 0.035152 TGGCTCTAGCACACCAATGG 60.035 55.000 0.00 0.00 44.36 3.16
2154 3108 1.133976 GGCTCTAGCACACCAATGGAT 60.134 52.381 6.16 0.00 44.36 3.41
2155 3109 1.945394 GCTCTAGCACACCAATGGATG 59.055 52.381 6.16 5.03 41.59 3.51
2157 3111 5.570483 GCTCTAGCACACCAATGGATGGA 62.570 52.174 6.16 0.00 46.24 3.41
2158 3112 6.974647 GCTCTAGCACACCAATGGATGGAA 62.975 50.000 6.16 0.00 46.24 3.53
2177 3573 3.557264 GGAACTTCCAGTCGTCTTGGAAT 60.557 47.826 14.94 5.33 40.46 3.01
2178 3574 3.045601 ACTTCCAGTCGTCTTGGAATG 57.954 47.619 14.94 12.23 40.46 2.67
2180 3576 0.389817 TCCAGTCGTCTTGGAATGCG 60.390 55.000 3.43 0.00 31.04 4.73
2181 3577 0.389817 CCAGTCGTCTTGGAATGCGA 60.390 55.000 0.00 0.00 31.04 5.10
2182 3578 1.645034 CAGTCGTCTTGGAATGCGAT 58.355 50.000 0.00 0.00 35.78 4.58
2183 3579 2.481276 CCAGTCGTCTTGGAATGCGATA 60.481 50.000 0.00 0.00 35.78 2.92
2184 3580 2.791560 CAGTCGTCTTGGAATGCGATAG 59.208 50.000 0.00 0.00 35.78 2.08
2185 3581 2.427453 AGTCGTCTTGGAATGCGATAGT 59.573 45.455 0.00 0.00 35.78 2.12
2186 3582 2.789893 GTCGTCTTGGAATGCGATAGTC 59.210 50.000 0.00 0.00 35.78 2.59
2187 3583 2.688446 TCGTCTTGGAATGCGATAGTCT 59.312 45.455 0.00 0.00 39.35 3.24
2191 3587 3.450817 TCTTGGAATGCGATAGTCTCCAA 59.549 43.478 2.15 2.15 43.23 3.53
2192 3588 3.459232 TGGAATGCGATAGTCTCCAAG 57.541 47.619 0.00 0.00 37.31 3.61
2193 3589 2.139118 GGAATGCGATAGTCTCCAAGC 58.861 52.381 0.00 0.00 39.35 4.01
2194 3590 1.789464 GAATGCGATAGTCTCCAAGCG 59.211 52.381 0.00 0.00 39.35 4.68
2195 3591 0.032678 ATGCGATAGTCTCCAAGCGG 59.967 55.000 0.00 0.00 39.35 5.52
2196 3592 1.320344 TGCGATAGTCTCCAAGCGGT 61.320 55.000 0.00 0.00 39.35 5.68
2197 3593 0.595310 GCGATAGTCTCCAAGCGGTC 60.595 60.000 0.00 0.00 39.35 4.79
2199 3595 1.002251 CGATAGTCTCCAAGCGGTCTC 60.002 57.143 0.00 0.00 0.00 3.36
2200 3596 1.002251 GATAGTCTCCAAGCGGTCTCG 60.002 57.143 0.00 0.00 39.81 4.04
2201 3597 0.322277 TAGTCTCCAAGCGGTCTCGT 60.322 55.000 0.00 0.00 38.89 4.18
2204 3600 2.670592 TCCAAGCGGTCTCGTCGA 60.671 61.111 0.00 0.00 38.89 4.20
2205 3601 1.994507 CTCCAAGCGGTCTCGTCGAT 61.995 60.000 0.00 0.00 38.89 3.59
2206 3602 1.586564 CCAAGCGGTCTCGTCGATC 60.587 63.158 0.00 0.00 38.89 3.69
2208 3604 0.456142 CAAGCGGTCTCGTCGATCAA 60.456 55.000 0.00 0.00 38.89 2.57
2209 3605 0.456221 AAGCGGTCTCGTCGATCAAT 59.544 50.000 0.00 0.00 38.89 2.57
2210 3606 0.248661 AGCGGTCTCGTCGATCAATG 60.249 55.000 0.00 0.00 38.89 2.82
2211 3607 1.812214 GCGGTCTCGTCGATCAATGC 61.812 60.000 0.00 0.00 38.89 3.56
2212 3608 0.248661 CGGTCTCGTCGATCAATGCT 60.249 55.000 0.00 0.00 0.00 3.79
2213 3609 1.002792 CGGTCTCGTCGATCAATGCTA 60.003 52.381 0.00 0.00 0.00 3.49
2214 3610 2.656085 GGTCTCGTCGATCAATGCTAG 58.344 52.381 0.00 0.00 0.00 3.42
2216 3612 2.290916 GTCTCGTCGATCAATGCTAGGA 59.709 50.000 0.00 0.00 0.00 2.94
2218 3614 1.001268 TCGTCGATCAATGCTAGGAGC 60.001 52.381 0.00 0.00 42.82 4.70
2230 3626 1.615883 GCTAGGAGCAAGGATCGATCA 59.384 52.381 25.93 2.08 41.89 2.92
2231 3627 2.609244 GCTAGGAGCAAGGATCGATCAC 60.609 54.545 25.93 15.35 41.89 3.06
2233 3629 1.833630 AGGAGCAAGGATCGATCACAA 59.166 47.619 25.93 0.00 0.00 3.33
2236 3632 4.285517 AGGAGCAAGGATCGATCACAATAT 59.714 41.667 25.93 7.75 0.00 1.28
2238 3634 3.750130 AGCAAGGATCGATCACAATATGC 59.250 43.478 25.93 22.05 0.00 3.14
2240 3636 4.067192 CAAGGATCGATCACAATATGCCA 58.933 43.478 25.93 0.00 0.00 4.92
2241 3637 4.564782 AGGATCGATCACAATATGCCAT 57.435 40.909 25.93 0.00 0.00 4.40
2242 3638 4.259356 AGGATCGATCACAATATGCCATG 58.741 43.478 25.93 0.00 0.00 3.66
2243 3639 3.376234 GGATCGATCACAATATGCCATGG 59.624 47.826 25.93 7.63 0.00 3.66
2245 3641 3.402110 TCGATCACAATATGCCATGGTC 58.598 45.455 14.67 6.41 0.00 4.02
2246 3642 3.140623 CGATCACAATATGCCATGGTCA 58.859 45.455 14.67 12.37 0.00 4.02
2247 3643 3.754850 CGATCACAATATGCCATGGTCAT 59.245 43.478 20.62 20.62 0.00 3.06
2249 3645 5.278610 CGATCACAATATGCCATGGTCATTT 60.279 40.000 21.59 13.90 0.00 2.32
2250 3646 5.518848 TCACAATATGCCATGGTCATTTC 57.481 39.130 21.59 2.82 0.00 2.17
2252 3648 4.036616 CACAATATGCCATGGTCATTTCGA 59.963 41.667 21.59 8.69 0.00 3.71
2253 3649 4.644234 ACAATATGCCATGGTCATTTCGAA 59.356 37.500 21.59 0.00 0.00 3.71
2254 3650 5.217393 CAATATGCCATGGTCATTTCGAAG 58.783 41.667 21.59 7.63 0.00 3.79
2256 3652 1.271871 TGCCATGGTCATTTCGAAGGT 60.272 47.619 14.67 0.00 0.00 3.50
2257 3653 1.133025 GCCATGGTCATTTCGAAGGTG 59.867 52.381 14.67 2.04 0.00 4.00
2258 3654 2.710377 CCATGGTCATTTCGAAGGTGA 58.290 47.619 2.57 10.24 0.00 4.02
2261 3657 3.762407 TGGTCATTTCGAAGGTGAAGA 57.238 42.857 14.47 4.57 0.00 2.87
2262 3658 3.664107 TGGTCATTTCGAAGGTGAAGAG 58.336 45.455 14.47 0.00 0.00 2.85
2263 3659 3.323691 TGGTCATTTCGAAGGTGAAGAGA 59.676 43.478 14.47 0.00 0.00 3.10
2264 3660 4.020218 TGGTCATTTCGAAGGTGAAGAGAT 60.020 41.667 14.47 0.00 0.00 2.75
2266 3662 5.163814 GGTCATTTCGAAGGTGAAGAGATTG 60.164 44.000 14.47 0.00 0.00 2.67
2267 3663 5.639506 GTCATTTCGAAGGTGAAGAGATTGA 59.360 40.000 14.47 0.00 0.00 2.57
2268 3664 6.314896 GTCATTTCGAAGGTGAAGAGATTGAT 59.685 38.462 14.47 0.00 0.00 2.57
2269 3665 6.314648 TCATTTCGAAGGTGAAGAGATTGATG 59.685 38.462 11.49 2.52 0.00 3.07
2271 3667 3.118629 TCGAAGGTGAAGAGATTGATGGG 60.119 47.826 0.00 0.00 0.00 4.00
2272 3668 3.369892 CGAAGGTGAAGAGATTGATGGGT 60.370 47.826 0.00 0.00 0.00 4.51
2273 3669 3.641434 AGGTGAAGAGATTGATGGGTG 57.359 47.619 0.00 0.00 0.00 4.61
2274 3670 3.184628 AGGTGAAGAGATTGATGGGTGA 58.815 45.455 0.00 0.00 0.00 4.02
2275 3671 3.199508 AGGTGAAGAGATTGATGGGTGAG 59.800 47.826 0.00 0.00 0.00 3.51
2276 3672 2.941720 GTGAAGAGATTGATGGGTGAGC 59.058 50.000 0.00 0.00 0.00 4.26
2277 3673 2.208431 GAAGAGATTGATGGGTGAGCG 58.792 52.381 0.00 0.00 0.00 5.03
2278 3674 0.467384 AGAGATTGATGGGTGAGCGG 59.533 55.000 0.00 0.00 0.00 5.52
2279 3675 0.533755 GAGATTGATGGGTGAGCGGG 60.534 60.000 0.00 0.00 0.00 6.13
2280 3676 0.982852 AGATTGATGGGTGAGCGGGA 60.983 55.000 0.00 0.00 0.00 5.14
2281 3677 0.533755 GATTGATGGGTGAGCGGGAG 60.534 60.000 0.00 0.00 0.00 4.30
2283 3679 2.184020 TTGATGGGTGAGCGGGAGTG 62.184 60.000 0.00 0.00 0.00 3.51
2284 3680 2.607750 ATGGGTGAGCGGGAGTGT 60.608 61.111 0.00 0.00 0.00 3.55
2285 3681 1.305802 ATGGGTGAGCGGGAGTGTA 60.306 57.895 0.00 0.00 0.00 2.90
2286 3682 1.330655 ATGGGTGAGCGGGAGTGTAG 61.331 60.000 0.00 0.00 0.00 2.74
2288 3684 2.722201 GGTGAGCGGGAGTGTAGGG 61.722 68.421 0.00 0.00 0.00 3.53
2289 3685 1.982938 GTGAGCGGGAGTGTAGGGT 60.983 63.158 0.00 0.00 0.00 4.34
2293 3689 0.251922 AGCGGGAGTGTAGGGTTACA 60.252 55.000 0.00 0.00 37.45 2.41
2315 4841 5.769662 ACACACATTTCCAGAGAGCAAAATA 59.230 36.000 0.00 0.00 0.00 1.40
2317 4843 7.039504 ACACACATTTCCAGAGAGCAAAATAAT 60.040 33.333 0.00 0.00 0.00 1.28
2318 4844 8.461222 CACACATTTCCAGAGAGCAAAATAATA 58.539 33.333 0.00 0.00 0.00 0.98
2319 4845 8.462016 ACACATTTCCAGAGAGCAAAATAATAC 58.538 33.333 0.00 0.00 0.00 1.89
2321 4847 8.897752 ACATTTCCAGAGAGCAAAATAATACTC 58.102 33.333 0.00 0.00 0.00 2.59
2322 4848 7.865706 TTTCCAGAGAGCAAAATAATACTCC 57.134 36.000 0.00 0.00 0.00 3.85
2323 4849 5.930135 TCCAGAGAGCAAAATAATACTCCC 58.070 41.667 0.00 0.00 0.00 4.30
2325 4851 5.529060 CCAGAGAGCAAAATAATACTCCCAC 59.471 44.000 0.00 0.00 0.00 4.61
2326 4852 5.529060 CAGAGAGCAAAATAATACTCCCACC 59.471 44.000 0.00 0.00 0.00 4.61
2327 4853 5.191722 AGAGAGCAAAATAATACTCCCACCA 59.808 40.000 0.00 0.00 0.00 4.17
2328 4854 6.018433 AGAGCAAAATAATACTCCCACCAT 57.982 37.500 0.00 0.00 0.00 3.55
2330 4856 6.547510 AGAGCAAAATAATACTCCCACCATTC 59.452 38.462 0.00 0.00 0.00 2.67
2331 4857 5.598417 AGCAAAATAATACTCCCACCATTCC 59.402 40.000 0.00 0.00 0.00 3.01
2332 4858 5.362430 GCAAAATAATACTCCCACCATTCCA 59.638 40.000 0.00 0.00 0.00 3.53
2333 4859 6.682861 GCAAAATAATACTCCCACCATTCCAC 60.683 42.308 0.00 0.00 0.00 4.02
2334 4860 5.725551 AATAATACTCCCACCATTCCACA 57.274 39.130 0.00 0.00 0.00 4.17
2335 4861 5.725551 ATAATACTCCCACCATTCCACAA 57.274 39.130 0.00 0.00 0.00 3.33
2337 4863 2.220653 ACTCCCACCATTCCACAATG 57.779 50.000 0.00 0.00 39.45 2.82
2338 4864 1.428912 ACTCCCACCATTCCACAATGT 59.571 47.619 0.00 0.00 38.22 2.71
2339 4865 2.647299 ACTCCCACCATTCCACAATGTA 59.353 45.455 0.00 0.00 38.22 2.29
2340 4866 3.282021 CTCCCACCATTCCACAATGTAG 58.718 50.000 0.00 0.00 38.22 2.74
2341 4867 2.647299 TCCCACCATTCCACAATGTAGT 59.353 45.455 0.00 0.00 38.22 2.73
2342 4868 2.754552 CCCACCATTCCACAATGTAGTG 59.245 50.000 0.00 0.00 38.22 2.74
2344 4870 2.164219 CACCATTCCACAATGTAGTGCC 59.836 50.000 0.00 0.00 38.22 5.01
2346 4872 3.265737 ACCATTCCACAATGTAGTGCCTA 59.734 43.478 0.00 0.00 38.22 3.93
2347 4873 4.079787 ACCATTCCACAATGTAGTGCCTAT 60.080 41.667 0.00 0.00 38.22 2.57
2348 4874 5.131977 ACCATTCCACAATGTAGTGCCTATA 59.868 40.000 0.00 0.00 38.22 1.31
2349 4875 5.702670 CCATTCCACAATGTAGTGCCTATAG 59.297 44.000 0.00 0.00 38.22 1.31
2350 4876 6.464322 CCATTCCACAATGTAGTGCCTATAGA 60.464 42.308 0.00 0.00 38.22 1.98
2351 4877 6.747414 TTCCACAATGTAGTGCCTATAGAT 57.253 37.500 0.00 0.00 38.18 1.98
2354 4880 7.573710 TCCACAATGTAGTGCCTATAGATTTT 58.426 34.615 0.00 0.00 38.18 1.82
2355 4881 8.052748 TCCACAATGTAGTGCCTATAGATTTTT 58.947 33.333 0.00 0.00 38.18 1.94
2356 4882 9.337396 CCACAATGTAGTGCCTATAGATTTTTA 57.663 33.333 0.00 0.00 38.18 1.52
2365 4891 9.905713 AGTGCCTATAGATTTTTATGAAAGTCA 57.094 29.630 0.00 0.00 34.85 3.41
2382 4908 4.799564 AGTCAAACTTTGCCAACTTTGA 57.200 36.364 5.68 5.68 31.68 2.69
2384 4910 3.616821 GTCAAACTTTGCCAACTTTGACC 59.383 43.478 19.93 9.30 43.35 4.02
2387 4913 3.525268 ACTTTGCCAACTTTGACCAAG 57.475 42.857 0.00 0.00 38.64 3.61
2389 4915 2.957491 TTGCCAACTTTGACCAAGTG 57.043 45.000 0.00 0.00 45.77 3.16
2390 4916 1.846007 TGCCAACTTTGACCAAGTGT 58.154 45.000 0.00 0.00 45.77 3.55
2391 4917 3.006112 TGCCAACTTTGACCAAGTGTA 57.994 42.857 0.00 0.00 45.77 2.90
2392 4918 3.561143 TGCCAACTTTGACCAAGTGTAT 58.439 40.909 0.00 0.00 45.77 2.29
2394 4920 4.759693 TGCCAACTTTGACCAAGTGTATAG 59.240 41.667 0.00 0.00 45.77 1.31
2396 4922 5.122396 GCCAACTTTGACCAAGTGTATAGAG 59.878 44.000 0.00 0.00 45.77 2.43
2397 4923 6.464222 CCAACTTTGACCAAGTGTATAGAGA 58.536 40.000 0.00 0.00 45.77 3.10
2398 4924 6.934645 CCAACTTTGACCAAGTGTATAGAGAA 59.065 38.462 0.00 0.00 45.77 2.87
2399 4925 7.444183 CCAACTTTGACCAAGTGTATAGAGAAA 59.556 37.037 0.00 0.00 45.77 2.52
2400 4926 8.836413 CAACTTTGACCAAGTGTATAGAGAAAA 58.164 33.333 0.00 0.00 45.77 2.29
2401 4927 8.379457 ACTTTGACCAAGTGTATAGAGAAAAC 57.621 34.615 0.00 0.00 44.70 2.43
2402 4928 8.211629 ACTTTGACCAAGTGTATAGAGAAAACT 58.788 33.333 0.00 0.00 44.70 2.66
2403 4929 7.962964 TTGACCAAGTGTATAGAGAAAACTG 57.037 36.000 0.00 0.00 0.00 3.16
2404 4930 7.062749 TGACCAAGTGTATAGAGAAAACTGT 57.937 36.000 0.00 0.00 0.00 3.55
2405 4931 7.152645 TGACCAAGTGTATAGAGAAAACTGTC 58.847 38.462 0.00 0.00 0.00 3.51
2408 4934 6.369065 CCAAGTGTATAGAGAAAACTGTCCAC 59.631 42.308 0.00 0.00 0.00 4.02
2411 4937 7.324178 AGTGTATAGAGAAAACTGTCCACATC 58.676 38.462 0.00 0.00 0.00 3.06
2412 4938 7.179338 AGTGTATAGAGAAAACTGTCCACATCT 59.821 37.037 0.00 0.00 0.00 2.90
2413 4939 8.467598 GTGTATAGAGAAAACTGTCCACATCTA 58.532 37.037 0.00 0.00 0.00 1.98
2414 4940 8.467598 TGTATAGAGAAAACTGTCCACATCTAC 58.532 37.037 0.00 0.00 0.00 2.59
2415 4941 5.808366 AGAGAAAACTGTCCACATCTACA 57.192 39.130 0.00 0.00 0.00 2.74
2416 4942 6.174720 AGAGAAAACTGTCCACATCTACAA 57.825 37.500 0.00 0.00 0.00 2.41
2418 4944 7.907389 AGAGAAAACTGTCCACATCTACAATA 58.093 34.615 0.00 0.00 0.00 1.90
2419 4945 7.819900 AGAGAAAACTGTCCACATCTACAATAC 59.180 37.037 0.00 0.00 0.00 1.89
2420 4946 6.879458 AGAAAACTGTCCACATCTACAATACC 59.121 38.462 0.00 0.00 0.00 2.73
2421 4947 5.755409 AACTGTCCACATCTACAATACCA 57.245 39.130 0.00 0.00 0.00 3.25
2424 4950 5.938125 ACTGTCCACATCTACAATACCAAAC 59.062 40.000 0.00 0.00 0.00 2.93
2425 4951 5.870706 TGTCCACATCTACAATACCAAACA 58.129 37.500 0.00 0.00 0.00 2.83
2426 4952 6.480763 TGTCCACATCTACAATACCAAACAT 58.519 36.000 0.00 0.00 0.00 2.71
2428 4954 6.374333 GTCCACATCTACAATACCAAACATGT 59.626 38.462 0.00 0.00 0.00 3.21
2429 4955 7.551262 GTCCACATCTACAATACCAAACATGTA 59.449 37.037 0.00 0.00 0.00 2.29
2430 4956 7.551262 TCCACATCTACAATACCAAACATGTAC 59.449 37.037 0.00 0.00 0.00 2.90
2431 4957 7.335673 CCACATCTACAATACCAAACATGTACA 59.664 37.037 0.00 0.00 0.00 2.90
2432 4958 8.892723 CACATCTACAATACCAAACATGTACAT 58.107 33.333 1.41 1.41 0.00 2.29
2433 4959 9.461312 ACATCTACAATACCAAACATGTACATT 57.539 29.630 5.37 0.00 0.00 2.71
2434 4960 9.935682 CATCTACAATACCAAACATGTACATTC 57.064 33.333 5.37 0.00 0.00 2.67
2435 4961 9.905713 ATCTACAATACCAAACATGTACATTCT 57.094 29.630 5.37 0.00 0.00 2.40
2439 4965 8.855110 ACAATACCAAACATGTACATTCTGAAA 58.145 29.630 5.37 0.00 0.00 2.69
2452 4978 9.863845 TGTACATTCTGAAAATATAACTCACGA 57.136 29.630 0.00 0.00 0.00 4.35
2459 4985 9.745880 TCTGAAAATATAACTCACGAAGTATCC 57.254 33.333 0.00 0.00 41.61 2.59
2460 4986 9.529325 CTGAAAATATAACTCACGAAGTATCCA 57.471 33.333 0.00 0.00 41.61 3.41
2461 4987 9.878667 TGAAAATATAACTCACGAAGTATCCAA 57.121 29.630 0.00 0.00 41.61 3.53
2466 4992 7.953158 ATAACTCACGAAGTATCCAATGATG 57.047 36.000 0.00 0.00 41.61 3.07
2468 4994 5.111989 ACTCACGAAGTATCCAATGATGTG 58.888 41.667 0.00 0.00 41.61 3.21
2469 4995 3.871006 TCACGAAGTATCCAATGATGTGC 59.129 43.478 0.00 0.00 41.61 4.57
2470 4996 3.622612 CACGAAGTATCCAATGATGTGCA 59.377 43.478 0.00 0.00 41.61 4.57
2471 4997 4.274214 CACGAAGTATCCAATGATGTGCAT 59.726 41.667 0.00 0.00 41.61 3.96
2472 4998 4.883585 ACGAAGTATCCAATGATGTGCATT 59.116 37.500 0.00 0.00 44.36 3.56
2474 5000 5.684184 CGAAGTATCCAATGATGTGCATTTG 59.316 40.000 0.00 0.00 44.68 2.32
2475 5001 5.524971 AGTATCCAATGATGTGCATTTGG 57.475 39.130 8.57 8.57 44.68 3.28
2477 5003 6.128486 AGTATCCAATGATGTGCATTTGGTA 58.872 36.000 12.63 5.40 44.68 3.25
2478 5004 6.779049 AGTATCCAATGATGTGCATTTGGTAT 59.221 34.615 12.63 9.03 44.68 2.73
2479 5005 5.936187 TCCAATGATGTGCATTTGGTATT 57.064 34.783 12.63 0.00 44.68 1.89
2480 5006 5.904941 TCCAATGATGTGCATTTGGTATTC 58.095 37.500 12.63 0.00 44.68 1.75
2482 5008 6.832900 TCCAATGATGTGCATTTGGTATTCTA 59.167 34.615 12.63 0.00 44.68 2.10
2484 5010 7.013559 CCAATGATGTGCATTTGGTATTCTAGA 59.986 37.037 0.00 0.00 44.68 2.43
2486 5012 7.500720 TGATGTGCATTTGGTATTCTAGATG 57.499 36.000 0.00 0.00 0.00 2.90
2487 5013 7.056006 TGATGTGCATTTGGTATTCTAGATGT 58.944 34.615 0.00 0.00 0.00 3.06
2488 5014 8.210265 TGATGTGCATTTGGTATTCTAGATGTA 58.790 33.333 0.00 0.00 0.00 2.29
2489 5015 7.786178 TGTGCATTTGGTATTCTAGATGTAC 57.214 36.000 0.00 0.27 32.91 2.90
2491 5017 6.992715 GTGCATTTGGTATTCTAGATGTACCT 59.007 38.462 24.31 10.63 38.89 3.08
2492 5018 8.148351 GTGCATTTGGTATTCTAGATGTACCTA 58.852 37.037 24.31 18.45 38.89 3.08
2493 5019 8.148351 TGCATTTGGTATTCTAGATGTACCTAC 58.852 37.037 24.31 14.77 38.89 3.18
2494 5020 8.368668 GCATTTGGTATTCTAGATGTACCTACT 58.631 37.037 24.31 14.71 38.89 2.57
2499 5025 9.710818 TGGTATTCTAGATGTACCTACTTTTCT 57.289 33.333 24.31 0.00 38.89 2.52
2539 5065 7.897575 AAGTTTGTAATGTTTGACTTTTGCA 57.102 28.000 0.00 0.00 0.00 4.08
2540 5066 7.897575 AGTTTGTAATGTTTGACTTTTGCAA 57.102 28.000 0.00 0.00 0.00 4.08
2542 5068 8.778358 AGTTTGTAATGTTTGACTTTTGCAAAA 58.222 25.926 22.61 22.61 37.03 2.44
2543 5069 9.387123 GTTTGTAATGTTTGACTTTTGCAAAAA 57.613 25.926 23.92 8.29 37.03 1.94
2545 5071 9.766277 TTGTAATGTTTGACTTTTGCAAAAATC 57.234 25.926 22.90 22.90 37.03 2.17
2546 5072 9.160496 TGTAATGTTTGACTTTTGCAAAAATCT 57.840 25.926 27.69 13.35 37.03 2.40
2551 5077 9.474920 TGTTTGACTTTTGCAAAAATCTATAGG 57.525 29.630 27.69 15.71 37.03 2.57
2552 5078 8.435430 GTTTGACTTTTGCAAAAATCTATAGGC 58.565 33.333 27.69 16.81 37.03 3.93
2553 5079 7.225784 TGACTTTTGCAAAAATCTATAGGCA 57.774 32.000 27.69 18.92 0.00 4.75
2554 5080 7.090173 TGACTTTTGCAAAAATCTATAGGCAC 58.910 34.615 27.69 12.10 0.00 5.01
2569 5095 3.194005 AGGCACTACATTATGGAACGG 57.806 47.619 0.00 0.00 36.02 4.44
2570 5096 2.769663 AGGCACTACATTATGGAACGGA 59.230 45.455 0.00 0.00 36.02 4.69
2571 5097 3.131396 GGCACTACATTATGGAACGGAG 58.869 50.000 0.00 0.00 0.00 4.63
2572 5098 3.131396 GCACTACATTATGGAACGGAGG 58.869 50.000 0.00 0.00 0.00 4.30
2573 5099 3.728845 CACTACATTATGGAACGGAGGG 58.271 50.000 0.00 0.00 0.00 4.30
2574 5100 3.386726 CACTACATTATGGAACGGAGGGA 59.613 47.826 0.00 0.00 0.00 4.20
2575 5101 3.641906 ACTACATTATGGAACGGAGGGAG 59.358 47.826 0.00 0.00 0.00 4.30
2576 5102 2.478292 ACATTATGGAACGGAGGGAGT 58.522 47.619 0.00 0.00 0.00 3.85
2577 5103 3.649843 ACATTATGGAACGGAGGGAGTA 58.350 45.455 0.00 0.00 0.00 2.59
2578 5104 4.232091 ACATTATGGAACGGAGGGAGTAT 58.768 43.478 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.455525 CGCTATTATTGGAAAAGCTTTTCGG 59.544 40.000 34.19 20.60 45.68 4.30
26 27 6.092748 CACACGCTATTATTGGAAAAGCTTT 58.907 36.000 5.69 5.69 0.00 3.51
27 28 5.640732 CACACGCTATTATTGGAAAAGCTT 58.359 37.500 0.00 0.00 0.00 3.74
28 29 4.438744 GCACACGCTATTATTGGAAAAGCT 60.439 41.667 0.00 0.00 34.30 3.74
29 30 3.791353 GCACACGCTATTATTGGAAAAGC 59.209 43.478 0.00 0.00 34.30 3.51
30 31 4.028383 CGCACACGCTATTATTGGAAAAG 58.972 43.478 0.00 0.00 35.30 2.27
45 46 3.989698 CTCTACCAGGGCGCACACG 62.990 68.421 14.57 2.69 44.07 4.49
57 58 1.215647 CGTGCACTCCACCTCTACC 59.784 63.158 16.19 0.00 41.53 3.18
99 100 3.612860 AGATACGCAAGATTTGTGACGAC 59.387 43.478 9.13 0.00 43.66 4.34
100 101 3.845178 AGATACGCAAGATTTGTGACGA 58.155 40.909 9.13 0.00 43.66 4.20
105 106 7.592938 TCAATGAAAAGATACGCAAGATTTGT 58.407 30.769 0.00 0.00 43.62 2.83
133 134 6.215121 CACAAAAAGATCAGCCATTGTAACA 58.785 36.000 0.00 0.00 30.48 2.41
146 147 6.187125 TGCTAGAGAATGCACAAAAAGATC 57.813 37.500 0.00 0.00 33.94 2.75
150 151 5.772825 AGTTGCTAGAGAATGCACAAAAA 57.227 34.783 0.00 0.00 39.05 1.94
222 223 9.247861 ACAAGATGCTTCCTTAAATTCACTTAT 57.752 29.630 0.00 0.00 0.00 1.73
235 236 5.128919 GTCCAATCATACAAGATGCTTCCT 58.871 41.667 0.00 0.00 0.00 3.36
237 238 4.811024 TCGTCCAATCATACAAGATGCTTC 59.189 41.667 0.00 0.00 0.00 3.86
240 241 5.008019 ACATTCGTCCAATCATACAAGATGC 59.992 40.000 0.00 0.00 0.00 3.91
246 247 7.726216 AGATAAGACATTCGTCCAATCATACA 58.274 34.615 0.00 0.00 43.73 2.29
251 252 7.308782 ACAAAGATAAGACATTCGTCCAATC 57.691 36.000 0.00 0.00 43.73 2.67
316 345 6.698380 TCTTAGCTAAGAGTTGATCGGTTTT 58.302 36.000 28.47 0.00 37.40 2.43
328 357 7.983413 GGGCATGCCTTCTCTTAGCTAAGAG 62.983 52.000 40.31 40.31 45.87 2.85
331 360 2.158755 GGGCATGCCTTCTCTTAGCTAA 60.159 50.000 34.70 5.94 36.10 3.09
427 456 5.053811 GCAAGAGGCTAGATTTAGTCTTCC 58.946 45.833 0.00 0.00 41.84 3.46
447 476 2.978156 AATCAAAGAGGTGGAGGCAA 57.022 45.000 0.00 0.00 0.00 4.52
536 565 4.473477 AAAGCCTAGCTACAACTACTGG 57.527 45.455 0.00 0.00 38.25 4.00
542 571 5.238583 TCTTCAGAAAAGCCTAGCTACAAC 58.761 41.667 0.00 0.00 38.25 3.32
544 573 4.772624 TCTCTTCAGAAAAGCCTAGCTACA 59.227 41.667 0.00 0.00 38.25 2.74
588 617 9.757227 TGAAATTTTCGGAAAGAACAAATATGT 57.243 25.926 3.09 0.00 43.14 2.29
670 702 0.593128 CAGGAGCAAGAAACAACGGG 59.407 55.000 0.00 0.00 0.00 5.28
766 805 0.960364 ATGCATGGTTGACACGGTCC 60.960 55.000 0.00 0.00 0.00 4.46
920 959 3.458189 GCTGTACTATGGTGTGATGACC 58.542 50.000 0.00 0.00 36.43 4.02
983 1022 2.203771 ATGGAGATCGTCGAGCCCC 61.204 63.158 6.92 5.33 0.00 5.80
1036 1077 1.602237 GGAGGAAGACCATGGCGAA 59.398 57.895 13.04 0.00 38.94 4.70
1096 1140 4.008933 GAGCGTCCACCCACTGCT 62.009 66.667 0.00 0.00 38.89 4.24
1182 1226 3.004734 GCACATGGTAATGGCTAATGGAC 59.995 47.826 0.00 0.00 38.19 4.02
1242 1302 1.536072 GCGCATCTCCGTGAATCAGTA 60.536 52.381 0.30 0.00 0.00 2.74
1578 1690 2.515523 GCAGCGGCAGGTCATCAT 60.516 61.111 3.18 0.00 40.72 2.45
1636 1754 3.300853 CGTGCACGATGTGACTAGTAAAG 59.699 47.826 34.93 0.00 43.02 1.85
1640 1758 0.596577 ACGTGCACGATGTGACTAGT 59.403 50.000 42.94 16.00 43.02 2.57
1687 1810 5.071115 TCATGATACGGGGAACATTACATGA 59.929 40.000 0.00 0.00 39.03 3.07
1706 1829 6.198403 GTCGAGCAACTAATAAATCGTCATGA 59.802 38.462 0.00 0.00 0.00 3.07
1748 2518 9.683870 ATCAACAACAATATTAATGGGCAATTT 57.316 25.926 0.00 0.00 0.00 1.82
1758 2528 4.339814 GCCCCGGATCAACAACAATATTAA 59.660 41.667 0.73 0.00 0.00 1.40
1761 2537 2.306847 GCCCCGGATCAACAACAATAT 58.693 47.619 0.73 0.00 0.00 1.28
1776 2552 1.885850 CGGTAGATTTTCCGCCCCG 60.886 63.158 0.00 0.00 40.28 5.73
1777 2553 4.136250 CGGTAGATTTTCCGCCCC 57.864 61.111 0.00 0.00 40.28 5.80
1813 2590 7.238486 AGCCAGAATGAACTATAGATACAGG 57.762 40.000 6.78 2.88 39.69 4.00
1817 2594 7.665974 TCTCGAAGCCAGAATGAACTATAGATA 59.334 37.037 6.78 0.00 39.69 1.98
1822 2599 5.543507 ATCTCGAAGCCAGAATGAACTAT 57.456 39.130 0.00 0.00 39.69 2.12
1823 2600 5.127845 AGAATCTCGAAGCCAGAATGAACTA 59.872 40.000 0.00 0.00 39.69 2.24
1824 2601 3.902881 ATCTCGAAGCCAGAATGAACT 57.097 42.857 0.00 0.00 39.69 3.01
1829 2606 3.431486 GGTGAGAATCTCGAAGCCAGAAT 60.431 47.826 5.73 0.00 34.92 2.40
1872 2650 5.240891 TCAGTGCACAGGAATTTTCTAGAG 58.759 41.667 21.04 0.00 0.00 2.43
1881 2835 3.820467 TCGAAATTTCAGTGCACAGGAAT 59.180 39.130 21.04 15.07 0.00 3.01
1895 2849 1.803334 TACCAGTGCGCTCGAAATTT 58.197 45.000 9.73 0.00 0.00 1.82
1897 2851 1.290203 CATACCAGTGCGCTCGAAAT 58.710 50.000 9.73 0.00 0.00 2.17
1898 2852 0.037697 ACATACCAGTGCGCTCGAAA 60.038 50.000 9.73 0.00 0.00 3.46
1899 2853 0.812549 TACATACCAGTGCGCTCGAA 59.187 50.000 9.73 0.00 0.00 3.71
1900 2854 0.099968 GTACATACCAGTGCGCTCGA 59.900 55.000 9.73 0.00 0.00 4.04
1901 2855 0.100682 AGTACATACCAGTGCGCTCG 59.899 55.000 9.73 0.00 0.00 5.03
1902 2856 1.536284 GGAGTACATACCAGTGCGCTC 60.536 57.143 9.73 4.74 0.00 5.03
1903 2857 0.460311 GGAGTACATACCAGTGCGCT 59.540 55.000 9.73 0.00 0.00 5.92
1904 2858 0.174845 TGGAGTACATACCAGTGCGC 59.825 55.000 0.00 0.00 0.00 6.09
1906 2860 4.377897 GGTTATGGAGTACATACCAGTGC 58.622 47.826 0.00 4.97 41.61 4.40
1907 2861 4.407621 TGGGTTATGGAGTACATACCAGTG 59.592 45.833 13.05 0.00 41.61 3.66
1908 2862 4.627015 TGGGTTATGGAGTACATACCAGT 58.373 43.478 13.05 4.38 41.61 4.00
1911 2865 5.514310 GGGAATGGGTTATGGAGTACATACC 60.514 48.000 0.00 0.37 41.61 2.73
1912 2866 5.557866 GGGAATGGGTTATGGAGTACATAC 58.442 45.833 0.00 0.00 41.61 2.39
1915 2869 2.436542 CGGGAATGGGTTATGGAGTACA 59.563 50.000 0.00 0.00 0.00 2.90
1916 2870 2.701951 TCGGGAATGGGTTATGGAGTAC 59.298 50.000 0.00 0.00 0.00 2.73
1920 2874 0.841289 GGTCGGGAATGGGTTATGGA 59.159 55.000 0.00 0.00 0.00 3.41
1923 2877 0.182775 GCAGGTCGGGAATGGGTTAT 59.817 55.000 0.00 0.00 0.00 1.89
1924 2878 1.202099 TGCAGGTCGGGAATGGGTTA 61.202 55.000 0.00 0.00 0.00 2.85
1925 2879 2.075355 TTGCAGGTCGGGAATGGGTT 62.075 55.000 0.00 0.00 0.00 4.11
1927 2881 2.046285 GTTGCAGGTCGGGAATGGG 61.046 63.158 0.00 0.00 0.00 4.00
1928 2882 1.002134 AGTTGCAGGTCGGGAATGG 60.002 57.895 0.00 0.00 0.00 3.16
1929 2883 1.308069 CCAGTTGCAGGTCGGGAATG 61.308 60.000 0.00 0.00 0.00 2.67
1930 2884 1.002134 CCAGTTGCAGGTCGGGAAT 60.002 57.895 0.00 0.00 0.00 3.01
1931 2885 2.111999 CTCCAGTTGCAGGTCGGGAA 62.112 60.000 8.26 0.00 0.00 3.97
1933 2887 2.046892 CTCCAGTTGCAGGTCGGG 60.047 66.667 0.00 0.00 0.00 5.14
1934 2888 1.374758 GACTCCAGTTGCAGGTCGG 60.375 63.158 0.00 0.00 0.00 4.79
1936 2890 1.003233 GGGACTCCAGTTGCAGGTC 60.003 63.158 0.00 0.00 0.00 3.85
1937 2891 2.529744 GGGGACTCCAGTTGCAGGT 61.530 63.158 0.00 0.00 35.00 4.00
1938 2892 2.227036 AGGGGACTCCAGTTGCAGG 61.227 63.158 0.00 0.00 32.90 4.85
1939 2893 1.002868 CAGGGGACTCCAGTTGCAG 60.003 63.158 0.00 0.00 40.21 4.41
1940 2894 3.160585 CAGGGGACTCCAGTTGCA 58.839 61.111 0.00 0.00 40.21 4.08
1941 2895 2.360475 GCAGGGGACTCCAGTTGC 60.360 66.667 0.00 0.00 40.21 4.17
1965 2919 2.042831 ACATTCAGCTTCGCCCAGC 61.043 57.895 0.00 0.00 40.44 4.85
1966 2920 1.651240 CCACATTCAGCTTCGCCCAG 61.651 60.000 0.00 0.00 0.00 4.45
1968 2922 0.749454 ATCCACATTCAGCTTCGCCC 60.749 55.000 0.00 0.00 0.00 6.13
1972 2926 1.674962 GAGCCATCCACATTCAGCTTC 59.325 52.381 0.00 0.00 0.00 3.86
1973 2927 1.284198 AGAGCCATCCACATTCAGCTT 59.716 47.619 0.00 0.00 0.00 3.74
1974 2928 0.917533 AGAGCCATCCACATTCAGCT 59.082 50.000 0.00 0.00 0.00 4.24
1975 2929 1.760192 AAGAGCCATCCACATTCAGC 58.240 50.000 0.00 0.00 0.00 4.26
1976 2930 3.349927 TGAAAGAGCCATCCACATTCAG 58.650 45.455 0.00 0.00 0.00 3.02
1977 2931 3.438216 TGAAAGAGCCATCCACATTCA 57.562 42.857 0.00 0.00 0.00 2.57
1978 2932 4.202090 GGATTGAAAGAGCCATCCACATTC 60.202 45.833 0.00 0.00 0.00 2.67
1979 2933 3.703052 GGATTGAAAGAGCCATCCACATT 59.297 43.478 0.00 0.00 0.00 2.71
1980 2934 3.294214 GGATTGAAAGAGCCATCCACAT 58.706 45.455 0.00 0.00 0.00 3.21
1981 2935 2.041485 TGGATTGAAAGAGCCATCCACA 59.959 45.455 0.00 0.00 33.71 4.17
1982 2936 2.686915 CTGGATTGAAAGAGCCATCCAC 59.313 50.000 0.00 0.00 34.79 4.02
1983 2937 2.577563 TCTGGATTGAAAGAGCCATCCA 59.422 45.455 0.00 0.00 36.80 3.41
1984 2938 3.287867 TCTGGATTGAAAGAGCCATCC 57.712 47.619 0.00 0.00 0.00 3.51
1986 2940 4.581309 TCTTCTGGATTGAAAGAGCCAT 57.419 40.909 0.00 0.00 0.00 4.40
1988 2942 4.897025 CATCTTCTGGATTGAAAGAGCC 57.103 45.455 0.00 0.00 31.27 4.70
2000 2954 2.053244 ACCTGCTATCCCATCTTCTGG 58.947 52.381 0.00 0.00 45.51 3.86
2002 2956 2.894126 CGTACCTGCTATCCCATCTTCT 59.106 50.000 0.00 0.00 0.00 2.85
2003 2957 2.028930 CCGTACCTGCTATCCCATCTTC 60.029 54.545 0.00 0.00 0.00 2.87
2004 2958 1.971357 CCGTACCTGCTATCCCATCTT 59.029 52.381 0.00 0.00 0.00 2.40
2008 2962 0.031917 TTCCCGTACCTGCTATCCCA 60.032 55.000 0.00 0.00 0.00 4.37
2009 2963 1.002087 CATTCCCGTACCTGCTATCCC 59.998 57.143 0.00 0.00 0.00 3.85
2010 2964 1.002087 CCATTCCCGTACCTGCTATCC 59.998 57.143 0.00 0.00 0.00 2.59
2011 2965 1.692519 ACCATTCCCGTACCTGCTATC 59.307 52.381 0.00 0.00 0.00 2.08
2012 2966 1.416401 CACCATTCCCGTACCTGCTAT 59.584 52.381 0.00 0.00 0.00 2.97
2015 2969 2.112815 GCACCATTCCCGTACCTGC 61.113 63.158 0.00 0.00 0.00 4.85
2016 2970 1.451387 GGCACCATTCCCGTACCTG 60.451 63.158 0.00 0.00 0.00 4.00
2018 2972 2.512974 CGGCACCATTCCCGTACC 60.513 66.667 0.00 0.00 39.67 3.34
2023 2977 4.041762 TCCCACGGCACCATTCCC 62.042 66.667 0.00 0.00 0.00 3.97
2024 2978 2.750237 GTCCCACGGCACCATTCC 60.750 66.667 0.00 0.00 0.00 3.01
2025 2979 2.750237 GGTCCCACGGCACCATTC 60.750 66.667 0.00 0.00 32.33 2.67
2026 2980 2.648613 TTTGGTCCCACGGCACCATT 62.649 55.000 0.00 0.00 42.42 3.16
2027 2981 2.648613 TTTTGGTCCCACGGCACCAT 62.649 55.000 0.00 0.00 42.42 3.55
2028 2982 2.648613 ATTTTGGTCCCACGGCACCA 62.649 55.000 0.00 0.00 41.13 4.17
2029 2983 1.906333 ATTTTGGTCCCACGGCACC 60.906 57.895 0.00 0.00 0.00 5.01
2032 2986 2.969827 CCATTTTGGTCCCACGGC 59.030 61.111 0.00 0.00 31.35 5.68
2034 2988 1.969064 TCGCCATTTTGGTCCCACG 60.969 57.895 0.00 0.00 40.46 4.94
2035 2989 1.175983 TGTCGCCATTTTGGTCCCAC 61.176 55.000 0.00 0.00 40.46 4.61
2036 2990 0.251564 ATGTCGCCATTTTGGTCCCA 60.252 50.000 0.00 0.00 40.46 4.37
2037 2991 0.455815 GATGTCGCCATTTTGGTCCC 59.544 55.000 0.00 0.00 40.46 4.46
2039 2993 3.508744 AATGATGTCGCCATTTTGGTC 57.491 42.857 0.00 0.00 40.46 4.02
2040 2994 3.959535 AAATGATGTCGCCATTTTGGT 57.040 38.095 0.00 0.00 40.22 3.67
2062 3016 1.614903 CACAAGGATCTGCAAGCCAAA 59.385 47.619 6.07 0.00 0.00 3.28
2064 3018 0.609957 CCACAAGGATCTGCAAGCCA 60.610 55.000 6.07 0.00 36.89 4.75
2065 3019 1.941999 GCCACAAGGATCTGCAAGCC 61.942 60.000 0.00 0.00 36.89 4.35
2066 3020 0.964358 AGCCACAAGGATCTGCAAGC 60.964 55.000 0.00 0.00 36.89 4.01
2067 3021 0.809385 CAGCCACAAGGATCTGCAAG 59.191 55.000 0.00 0.00 36.89 4.01
2068 3022 0.111061 ACAGCCACAAGGATCTGCAA 59.889 50.000 0.00 0.00 36.89 4.08
2069 3023 0.607217 CACAGCCACAAGGATCTGCA 60.607 55.000 0.00 0.00 36.89 4.41
2070 3024 1.930908 GCACAGCCACAAGGATCTGC 61.931 60.000 0.00 0.00 36.89 4.26
2071 3025 2.177950 GCACAGCCACAAGGATCTG 58.822 57.895 0.00 0.00 36.89 2.90
2072 3026 4.730487 GCACAGCCACAAGGATCT 57.270 55.556 0.00 0.00 36.89 2.75
2084 3038 4.431131 AAGGGCATCCGGGCACAG 62.431 66.667 7.73 0.00 45.66 3.66
2086 3040 3.721370 ATGAAGGGCATCCGGGCAC 62.721 63.158 0.00 0.00 45.66 5.01
2090 3044 2.124193 TGCATGAAGGGCATCCGG 60.124 61.111 0.00 0.00 36.11 5.14
2091 3045 1.153107 TCTGCATGAAGGGCATCCG 60.153 57.895 0.00 0.00 41.06 4.18
2092 3046 1.453762 GCTCTGCATGAAGGGCATCC 61.454 60.000 21.63 0.00 43.61 3.51
2093 3047 1.783031 CGCTCTGCATGAAGGGCATC 61.783 60.000 25.64 0.00 44.44 3.91
2095 3049 2.437180 CGCTCTGCATGAAGGGCA 60.437 61.111 25.64 0.00 44.44 5.36
2096 3050 2.437359 ACGCTCTGCATGAAGGGC 60.437 61.111 16.49 16.49 40.51 5.19
2097 3051 2.758089 GCACGCTCTGCATGAAGGG 61.758 63.158 0.00 0.00 46.29 3.95
2098 3052 2.789917 GCACGCTCTGCATGAAGG 59.210 61.111 0.00 0.00 46.29 3.46
2105 3059 3.873883 GCATCCTGCACGCTCTGC 61.874 66.667 0.00 0.00 44.26 4.26
2115 3069 1.068588 CCAGCCATTTCATGCATCCTG 59.931 52.381 0.00 0.00 0.00 3.86
2116 3070 1.410004 CCAGCCATTTCATGCATCCT 58.590 50.000 0.00 0.00 0.00 3.24
2117 3071 0.249741 GCCAGCCATTTCATGCATCC 60.250 55.000 0.00 0.00 0.00 3.51
2118 3072 0.750850 AGCCAGCCATTTCATGCATC 59.249 50.000 0.00 0.00 0.00 3.91
2119 3073 0.750850 GAGCCAGCCATTTCATGCAT 59.249 50.000 0.00 0.00 0.00 3.96
2121 3075 1.607628 CTAGAGCCAGCCATTTCATGC 59.392 52.381 0.00 0.00 0.00 4.06
2122 3076 1.607628 GCTAGAGCCAGCCATTTCATG 59.392 52.381 0.00 0.00 35.40 3.07
2124 3078 0.620030 TGCTAGAGCCAGCCATTTCA 59.380 50.000 0.00 0.00 41.04 2.69
2125 3079 1.020437 GTGCTAGAGCCAGCCATTTC 58.980 55.000 0.00 0.00 41.04 2.17
2127 3081 0.393537 GTGTGCTAGAGCCAGCCATT 60.394 55.000 0.00 0.00 41.04 3.16
2128 3082 1.222936 GTGTGCTAGAGCCAGCCAT 59.777 57.895 0.00 0.00 41.04 4.40
2129 3083 2.665000 GTGTGCTAGAGCCAGCCA 59.335 61.111 0.00 0.00 41.04 4.75
2131 3085 0.393537 ATTGGTGTGCTAGAGCCAGC 60.394 55.000 12.43 12.43 42.15 4.85
2132 3086 1.376543 CATTGGTGTGCTAGAGCCAG 58.623 55.000 0.00 0.00 41.18 4.85
2133 3087 0.035152 CCATTGGTGTGCTAGAGCCA 60.035 55.000 0.00 0.00 41.18 4.75
2134 3088 0.253044 TCCATTGGTGTGCTAGAGCC 59.747 55.000 1.86 0.00 41.18 4.70
2135 3089 1.945394 CATCCATTGGTGTGCTAGAGC 59.055 52.381 1.86 0.00 42.50 4.09
2136 3090 2.171237 TCCATCCATTGGTGTGCTAGAG 59.829 50.000 1.86 0.00 46.52 2.43
2138 3092 2.684881 GTTCCATCCATTGGTGTGCTAG 59.315 50.000 1.86 0.00 46.52 3.42
2139 3093 2.308570 AGTTCCATCCATTGGTGTGCTA 59.691 45.455 1.86 0.00 46.52 3.49
2140 3094 1.076024 AGTTCCATCCATTGGTGTGCT 59.924 47.619 1.86 0.00 46.52 4.40
2141 3095 1.549203 AGTTCCATCCATTGGTGTGC 58.451 50.000 1.86 0.00 46.52 4.57
2142 3096 2.493278 GGAAGTTCCATCCATTGGTGTG 59.507 50.000 17.44 3.47 46.52 3.82
2143 3097 2.109834 TGGAAGTTCCATCCATTGGTGT 59.890 45.455 21.05 0.00 42.67 4.16
2144 3098 2.806434 TGGAAGTTCCATCCATTGGTG 58.194 47.619 21.05 0.74 42.67 4.17
2159 3113 1.734465 GCATTCCAAGACGACTGGAAG 59.266 52.381 17.90 12.78 43.86 3.46
2160 3114 1.808411 GCATTCCAAGACGACTGGAA 58.192 50.000 16.17 16.17 44.60 3.53
2161 3115 0.389817 CGCATTCCAAGACGACTGGA 60.390 55.000 0.00 0.00 0.00 3.86
2162 3116 0.389817 TCGCATTCCAAGACGACTGG 60.390 55.000 0.00 0.00 0.00 4.00
2163 3117 1.645034 ATCGCATTCCAAGACGACTG 58.355 50.000 0.00 0.00 37.37 3.51
2164 3118 2.427453 ACTATCGCATTCCAAGACGACT 59.573 45.455 0.00 0.00 37.37 4.18
2177 3573 1.320344 ACCGCTTGGAGACTATCGCA 61.320 55.000 0.00 0.00 36.26 5.10
2178 3574 0.595310 GACCGCTTGGAGACTATCGC 60.595 60.000 0.00 0.00 36.26 4.58
2180 3576 1.002251 CGAGACCGCTTGGAGACTATC 60.002 57.143 0.00 0.00 36.26 2.08
2181 3577 1.025812 CGAGACCGCTTGGAGACTAT 58.974 55.000 0.00 0.00 36.26 2.12
2182 3578 0.322277 ACGAGACCGCTTGGAGACTA 60.322 55.000 0.00 0.00 39.95 2.59
2183 3579 1.587933 GACGAGACCGCTTGGAGACT 61.588 60.000 0.00 0.00 39.95 3.24
2184 3580 1.153997 GACGAGACCGCTTGGAGAC 60.154 63.158 0.00 0.00 39.95 3.36
2185 3581 2.687805 CGACGAGACCGCTTGGAGA 61.688 63.158 0.00 0.00 39.95 3.71
2186 3582 1.994507 ATCGACGAGACCGCTTGGAG 61.995 60.000 3.01 0.00 39.95 3.86
2187 3583 1.989966 GATCGACGAGACCGCTTGGA 61.990 60.000 3.01 0.00 39.95 3.53
2191 3587 0.248661 CATTGATCGACGAGACCGCT 60.249 55.000 3.01 0.00 39.95 5.52
2192 3588 1.812214 GCATTGATCGACGAGACCGC 61.812 60.000 3.01 0.00 39.95 5.68
2193 3589 0.248661 AGCATTGATCGACGAGACCG 60.249 55.000 3.01 0.00 42.50 4.79
2194 3590 2.605823 CCTAGCATTGATCGACGAGACC 60.606 54.545 3.01 0.00 0.00 3.85
2195 3591 2.290916 TCCTAGCATTGATCGACGAGAC 59.709 50.000 3.01 0.68 0.00 3.36
2196 3592 2.550180 CTCCTAGCATTGATCGACGAGA 59.450 50.000 3.01 0.00 0.00 4.04
2197 3593 2.920227 GCTCCTAGCATTGATCGACGAG 60.920 54.545 3.01 0.00 41.89 4.18
2199 3595 1.413382 GCTCCTAGCATTGATCGACG 58.587 55.000 0.00 0.00 41.89 5.12
2210 3606 1.615883 TGATCGATCCTTGCTCCTAGC 59.384 52.381 22.31 0.00 42.82 3.42
2211 3607 2.625314 TGTGATCGATCCTTGCTCCTAG 59.375 50.000 22.31 0.00 0.00 3.02
2212 3608 2.666317 TGTGATCGATCCTTGCTCCTA 58.334 47.619 22.31 0.00 0.00 2.94
2213 3609 1.489481 TGTGATCGATCCTTGCTCCT 58.511 50.000 22.31 0.00 0.00 3.69
2214 3610 2.315925 TTGTGATCGATCCTTGCTCC 57.684 50.000 22.31 0.00 0.00 4.70
2216 3612 3.750130 GCATATTGTGATCGATCCTTGCT 59.250 43.478 22.31 6.42 0.00 3.91
2218 3614 4.067192 TGGCATATTGTGATCGATCCTTG 58.933 43.478 22.31 11.27 0.00 3.61
2219 3615 4.356405 TGGCATATTGTGATCGATCCTT 57.644 40.909 22.31 7.25 0.00 3.36
2220 3616 4.259356 CATGGCATATTGTGATCGATCCT 58.741 43.478 22.31 7.42 0.00 3.24
2223 3619 4.005650 GACCATGGCATATTGTGATCGAT 58.994 43.478 13.04 0.00 0.00 3.59
2225 3621 3.140623 TGACCATGGCATATTGTGATCG 58.859 45.455 13.04 0.00 0.00 3.69
2227 3623 5.278610 CGAAATGACCATGGCATATTGTGAT 60.279 40.000 13.04 0.00 0.00 3.06
2228 3624 4.036616 CGAAATGACCATGGCATATTGTGA 59.963 41.667 13.04 0.00 0.00 3.58
2230 3626 4.206375 TCGAAATGACCATGGCATATTGT 58.794 39.130 13.04 0.00 0.00 2.71
2231 3627 4.834357 TCGAAATGACCATGGCATATTG 57.166 40.909 13.04 9.26 0.00 1.90
2233 3629 3.822735 CCTTCGAAATGACCATGGCATAT 59.177 43.478 13.04 0.33 0.00 1.78
2236 3632 1.271871 ACCTTCGAAATGACCATGGCA 60.272 47.619 13.04 11.62 0.00 4.92
2238 3634 2.710377 TCACCTTCGAAATGACCATGG 58.290 47.619 11.19 11.19 0.00 3.66
2240 3636 4.020218 TCTCTTCACCTTCGAAATGACCAT 60.020 41.667 10.50 0.00 0.00 3.55
2241 3637 3.323691 TCTCTTCACCTTCGAAATGACCA 59.676 43.478 10.50 1.66 0.00 4.02
2242 3638 3.926616 TCTCTTCACCTTCGAAATGACC 58.073 45.455 10.50 0.00 0.00 4.02
2243 3639 5.639506 TCAATCTCTTCACCTTCGAAATGAC 59.360 40.000 10.50 0.00 0.00 3.06
2245 3641 6.457934 CCATCAATCTCTTCACCTTCGAAATG 60.458 42.308 0.00 0.68 0.00 2.32
2246 3642 5.587844 CCATCAATCTCTTCACCTTCGAAAT 59.412 40.000 0.00 0.00 0.00 2.17
2247 3643 4.937620 CCATCAATCTCTTCACCTTCGAAA 59.062 41.667 0.00 0.00 0.00 3.46
2249 3645 3.118629 CCCATCAATCTCTTCACCTTCGA 60.119 47.826 0.00 0.00 0.00 3.71
2250 3646 3.201290 CCCATCAATCTCTTCACCTTCG 58.799 50.000 0.00 0.00 0.00 3.79
2252 3648 3.588842 TCACCCATCAATCTCTTCACCTT 59.411 43.478 0.00 0.00 0.00 3.50
2253 3649 3.184628 TCACCCATCAATCTCTTCACCT 58.815 45.455 0.00 0.00 0.00 4.00
2254 3650 3.539604 CTCACCCATCAATCTCTTCACC 58.460 50.000 0.00 0.00 0.00 4.02
2256 3652 2.419159 CGCTCACCCATCAATCTCTTCA 60.419 50.000 0.00 0.00 0.00 3.02
2257 3653 2.208431 CGCTCACCCATCAATCTCTTC 58.792 52.381 0.00 0.00 0.00 2.87
2258 3654 1.134280 CCGCTCACCCATCAATCTCTT 60.134 52.381 0.00 0.00 0.00 2.85
2261 3657 0.982852 TCCCGCTCACCCATCAATCT 60.983 55.000 0.00 0.00 0.00 2.40
2262 3658 0.533755 CTCCCGCTCACCCATCAATC 60.534 60.000 0.00 0.00 0.00 2.67
2263 3659 1.274703 ACTCCCGCTCACCCATCAAT 61.275 55.000 0.00 0.00 0.00 2.57
2264 3660 1.918293 ACTCCCGCTCACCCATCAA 60.918 57.895 0.00 0.00 0.00 2.57
2266 3662 1.327690 TACACTCCCGCTCACCCATC 61.328 60.000 0.00 0.00 0.00 3.51
2267 3663 1.305802 TACACTCCCGCTCACCCAT 60.306 57.895 0.00 0.00 0.00 4.00
2268 3664 1.982395 CTACACTCCCGCTCACCCA 60.982 63.158 0.00 0.00 0.00 4.51
2269 3665 2.722201 CCTACACTCCCGCTCACCC 61.722 68.421 0.00 0.00 0.00 4.61
2271 3667 1.542187 AACCCTACACTCCCGCTCAC 61.542 60.000 0.00 0.00 0.00 3.51
2272 3668 0.040058 TAACCCTACACTCCCGCTCA 59.960 55.000 0.00 0.00 0.00 4.26
2273 3669 0.459078 GTAACCCTACACTCCCGCTC 59.541 60.000 0.00 0.00 0.00 5.03
2274 3670 0.251922 TGTAACCCTACACTCCCGCT 60.252 55.000 0.00 0.00 32.93 5.52
2275 3671 2.279842 TGTAACCCTACACTCCCGC 58.720 57.895 0.00 0.00 32.93 6.13
2283 3679 4.901868 TCTGGAAATGTGTGTAACCCTAC 58.098 43.478 0.00 0.00 34.36 3.18
2284 3680 4.841813 TCTCTGGAAATGTGTGTAACCCTA 59.158 41.667 0.00 0.00 34.36 3.53
2285 3681 3.650942 TCTCTGGAAATGTGTGTAACCCT 59.349 43.478 0.00 0.00 34.36 4.34
2286 3682 4.003648 CTCTCTGGAAATGTGTGTAACCC 58.996 47.826 0.00 0.00 34.36 4.11
2288 3684 4.065088 TGCTCTCTGGAAATGTGTGTAAC 58.935 43.478 0.00 0.00 37.35 2.50
2289 3685 4.350368 TGCTCTCTGGAAATGTGTGTAA 57.650 40.909 0.00 0.00 0.00 2.41
2293 3689 6.899393 TTATTTTGCTCTCTGGAAATGTGT 57.101 33.333 0.00 0.00 35.93 3.72
2295 3691 8.814038 AGTATTATTTTGCTCTCTGGAAATGT 57.186 30.769 0.00 0.00 35.93 2.71
2296 3692 8.348507 GGAGTATTATTTTGCTCTCTGGAAATG 58.651 37.037 0.00 0.00 35.93 2.32
2297 3693 7.503902 GGGAGTATTATTTTGCTCTCTGGAAAT 59.496 37.037 0.00 0.00 35.93 2.17
2298 3694 6.828785 GGGAGTATTATTTTGCTCTCTGGAAA 59.171 38.462 0.00 0.00 34.17 3.13
2299 3695 6.069673 TGGGAGTATTATTTTGCTCTCTGGAA 60.070 38.462 0.00 0.00 30.29 3.53
2300 3696 5.428457 TGGGAGTATTATTTTGCTCTCTGGA 59.572 40.000 0.00 0.00 30.29 3.86
2301 3697 5.529060 GTGGGAGTATTATTTTGCTCTCTGG 59.471 44.000 0.00 0.00 30.29 3.86
2302 3698 5.529060 GGTGGGAGTATTATTTTGCTCTCTG 59.471 44.000 0.00 0.00 30.29 3.35
2315 4841 4.264352 ACATTGTGGAATGGTGGGAGTATT 60.264 41.667 0.00 0.00 43.00 1.89
2317 4843 2.647299 ACATTGTGGAATGGTGGGAGTA 59.353 45.455 0.00 0.00 43.00 2.59
2318 4844 1.428912 ACATTGTGGAATGGTGGGAGT 59.571 47.619 0.00 0.00 43.00 3.85
2319 4845 2.220653 ACATTGTGGAATGGTGGGAG 57.779 50.000 0.00 0.00 43.00 4.30
2321 4847 2.754552 CACTACATTGTGGAATGGTGGG 59.245 50.000 7.20 0.00 43.00 4.61
2322 4848 2.164219 GCACTACATTGTGGAATGGTGG 59.836 50.000 7.20 0.00 43.00 4.61
2323 4849 2.164219 GGCACTACATTGTGGAATGGTG 59.836 50.000 7.20 4.40 43.00 4.17
2325 4851 2.726821 AGGCACTACATTGTGGAATGG 58.273 47.619 7.20 0.00 43.00 3.16
2339 4865 9.905713 TGACTTTCATAAAAATCTATAGGCACT 57.094 29.630 0.00 0.00 46.37 4.40
2348 4874 9.045223 GGCAAAGTTTGACTTTCATAAAAATCT 57.955 29.630 19.82 0.00 44.47 2.40
2349 4875 8.825745 TGGCAAAGTTTGACTTTCATAAAAATC 58.174 29.630 21.83 0.00 44.47 2.17
2350 4876 8.729805 TGGCAAAGTTTGACTTTCATAAAAAT 57.270 26.923 21.83 0.00 44.47 1.82
2351 4877 8.447053 GTTGGCAAAGTTTGACTTTCATAAAAA 58.553 29.630 21.83 2.22 44.47 1.94
2354 4880 6.872920 AGTTGGCAAAGTTTGACTTTCATAA 58.127 32.000 21.83 4.37 44.47 1.90
2355 4881 6.463995 AGTTGGCAAAGTTTGACTTTCATA 57.536 33.333 21.83 0.00 44.47 2.15
2356 4882 5.343307 AGTTGGCAAAGTTTGACTTTCAT 57.657 34.783 21.83 1.69 44.47 2.57
2357 4883 4.799564 AGTTGGCAAAGTTTGACTTTCA 57.200 36.364 21.83 0.00 44.47 2.69
2365 4891 3.971245 TGGTCAAAGTTGGCAAAGTTT 57.029 38.095 0.00 0.42 39.10 2.66
2377 4903 8.499162 CAGTTTTCTCTATACACTTGGTCAAAG 58.501 37.037 0.00 0.00 42.07 2.77
2379 4905 7.506114 ACAGTTTTCTCTATACACTTGGTCAA 58.494 34.615 0.00 0.00 0.00 3.18
2382 4908 6.042781 TGGACAGTTTTCTCTATACACTTGGT 59.957 38.462 0.00 0.00 0.00 3.67
2384 4910 6.929049 TGTGGACAGTTTTCTCTATACACTTG 59.071 38.462 0.00 0.00 0.00 3.16
2387 4913 7.324178 AGATGTGGACAGTTTTCTCTATACAC 58.676 38.462 0.00 0.00 0.00 2.90
2388 4914 7.482169 AGATGTGGACAGTTTTCTCTATACA 57.518 36.000 0.00 0.00 0.00 2.29
2389 4915 8.467598 TGTAGATGTGGACAGTTTTCTCTATAC 58.532 37.037 0.00 0.00 0.00 1.47
2390 4916 8.589701 TGTAGATGTGGACAGTTTTCTCTATA 57.410 34.615 0.00 0.00 0.00 1.31
2391 4917 7.482169 TGTAGATGTGGACAGTTTTCTCTAT 57.518 36.000 0.00 0.00 0.00 1.98
2392 4918 6.911250 TGTAGATGTGGACAGTTTTCTCTA 57.089 37.500 0.00 0.00 0.00 2.43
2394 4920 7.064728 GGTATTGTAGATGTGGACAGTTTTCTC 59.935 40.741 0.00 0.00 0.00 2.87
2396 4922 6.653320 TGGTATTGTAGATGTGGACAGTTTTC 59.347 38.462 0.00 0.00 0.00 2.29
2397 4923 6.539173 TGGTATTGTAGATGTGGACAGTTTT 58.461 36.000 0.00 0.00 0.00 2.43
2398 4924 6.121776 TGGTATTGTAGATGTGGACAGTTT 57.878 37.500 0.00 0.00 0.00 2.66
2399 4925 5.755409 TGGTATTGTAGATGTGGACAGTT 57.245 39.130 0.00 0.00 0.00 3.16
2400 4926 5.755409 TTGGTATTGTAGATGTGGACAGT 57.245 39.130 0.00 0.00 0.00 3.55
2401 4927 5.937540 TGTTTGGTATTGTAGATGTGGACAG 59.062 40.000 0.00 0.00 0.00 3.51
2402 4928 5.870706 TGTTTGGTATTGTAGATGTGGACA 58.129 37.500 0.00 0.00 0.00 4.02
2403 4929 6.374333 ACATGTTTGGTATTGTAGATGTGGAC 59.626 38.462 0.00 0.00 0.00 4.02
2404 4930 6.480763 ACATGTTTGGTATTGTAGATGTGGA 58.519 36.000 0.00 0.00 0.00 4.02
2405 4931 6.757897 ACATGTTTGGTATTGTAGATGTGG 57.242 37.500 0.00 0.00 0.00 4.17
2408 4934 9.935682 GAATGTACATGTTTGGTATTGTAGATG 57.064 33.333 9.63 0.00 31.34 2.90
2411 4937 9.161629 TCAGAATGTACATGTTTGGTATTGTAG 57.838 33.333 9.63 0.00 37.40 2.74
2412 4938 9.508642 TTCAGAATGTACATGTTTGGTATTGTA 57.491 29.630 9.63 0.00 37.40 2.41
2413 4939 7.994425 TCAGAATGTACATGTTTGGTATTGT 57.006 32.000 9.63 0.00 37.40 2.71
2414 4940 9.689976 TTTTCAGAATGTACATGTTTGGTATTG 57.310 29.630 9.63 0.00 37.40 1.90
2426 4952 9.863845 TCGTGAGTTATATTTTCAGAATGTACA 57.136 29.630 0.00 0.00 37.40 2.90
2429 4955 9.436957 ACTTCGTGAGTTATATTTTCAGAATGT 57.563 29.630 0.00 0.00 33.92 2.71
2433 4959 9.745880 GGATACTTCGTGAGTTATATTTTCAGA 57.254 33.333 0.00 0.00 39.86 3.27
2434 4960 9.529325 TGGATACTTCGTGAGTTATATTTTCAG 57.471 33.333 0.00 0.00 39.86 3.02
2435 4961 9.878667 TTGGATACTTCGTGAGTTATATTTTCA 57.121 29.630 0.00 0.00 39.86 2.69
2442 4968 7.439356 CACATCATTGGATACTTCGTGAGTTAT 59.561 37.037 0.00 0.00 39.86 1.89
2443 4969 6.756542 CACATCATTGGATACTTCGTGAGTTA 59.243 38.462 0.00 0.00 39.86 2.24
2444 4970 5.582269 CACATCATTGGATACTTCGTGAGTT 59.418 40.000 0.00 0.00 39.86 3.01
2445 4971 5.111989 CACATCATTGGATACTTCGTGAGT 58.888 41.667 0.00 0.37 42.55 3.41
2446 4972 4.025396 GCACATCATTGGATACTTCGTGAG 60.025 45.833 0.00 0.00 37.61 3.51
2447 4973 3.871006 GCACATCATTGGATACTTCGTGA 59.129 43.478 0.00 0.00 37.61 4.35
2449 4975 3.872696 TGCACATCATTGGATACTTCGT 58.127 40.909 0.00 0.00 37.61 3.85
2450 4976 5.428496 AATGCACATCATTGGATACTTCG 57.572 39.130 0.00 0.00 43.40 3.79
2452 4978 5.422970 ACCAAATGCACATCATTGGATACTT 59.577 36.000 17.12 0.00 44.23 2.24
2453 4979 4.957954 ACCAAATGCACATCATTGGATACT 59.042 37.500 17.12 0.00 44.23 2.12
2454 4980 5.266733 ACCAAATGCACATCATTGGATAC 57.733 39.130 17.12 0.00 44.23 2.24
2455 4981 7.506599 AGAATACCAAATGCACATCATTGGATA 59.493 33.333 17.12 8.79 44.23 2.59
2456 4982 6.325545 AGAATACCAAATGCACATCATTGGAT 59.674 34.615 17.12 6.97 44.23 3.41
2457 4983 5.657745 AGAATACCAAATGCACATCATTGGA 59.342 36.000 17.12 5.42 44.23 3.53
2458 4984 5.909477 AGAATACCAAATGCACATCATTGG 58.091 37.500 11.02 11.02 44.23 3.16
2459 4985 7.933396 TCTAGAATACCAAATGCACATCATTG 58.067 34.615 0.00 0.00 44.23 2.82
2460 4986 8.573885 CATCTAGAATACCAAATGCACATCATT 58.426 33.333 0.00 0.00 46.82 2.57
2461 4987 7.722728 ACATCTAGAATACCAAATGCACATCAT 59.277 33.333 0.00 0.00 36.87 2.45
2462 4988 7.056006 ACATCTAGAATACCAAATGCACATCA 58.944 34.615 0.00 0.00 0.00 3.07
2463 4989 7.502120 ACATCTAGAATACCAAATGCACATC 57.498 36.000 0.00 0.00 0.00 3.06
2464 4990 7.445402 GGTACATCTAGAATACCAAATGCACAT 59.555 37.037 22.87 0.00 38.61 3.21
2465 4991 6.765989 GGTACATCTAGAATACCAAATGCACA 59.234 38.462 22.87 0.00 38.61 4.57
2466 4992 6.992715 AGGTACATCTAGAATACCAAATGCAC 59.007 38.462 26.72 9.05 40.81 4.57
2468 4994 8.368668 AGTAGGTACATCTAGAATACCAAATGC 58.631 37.037 26.72 15.90 40.81 3.56
2513 5039 8.226448 TGCAAAAGTCAAACATTACAAACTTTG 58.774 29.630 0.00 0.00 37.12 2.77
2514 5040 8.316640 TGCAAAAGTCAAACATTACAAACTTT 57.683 26.923 0.00 0.00 38.27 2.66
2515 5041 7.897575 TGCAAAAGTCAAACATTACAAACTT 57.102 28.000 0.00 0.00 0.00 2.66
2517 5043 8.941127 TTTTGCAAAAGTCAAACATTACAAAC 57.059 26.923 20.46 0.00 33.66 2.93
2519 5045 9.766277 GATTTTTGCAAAAGTCAAACATTACAA 57.234 25.926 31.15 12.48 35.47 2.41
2525 5051 9.474920 CCTATAGATTTTTGCAAAAGTCAAACA 57.525 29.630 34.74 22.58 37.17 2.83
2526 5052 8.435430 GCCTATAGATTTTTGCAAAAGTCAAAC 58.565 33.333 34.74 20.44 37.17 2.93
2528 5054 7.598493 GTGCCTATAGATTTTTGCAAAAGTCAA 59.402 33.333 34.74 23.52 37.17 3.18
2529 5055 7.039784 AGTGCCTATAGATTTTTGCAAAAGTCA 60.040 33.333 34.74 25.12 37.17 3.41
2530 5056 7.315890 AGTGCCTATAGATTTTTGCAAAAGTC 58.684 34.615 29.81 29.81 35.58 3.01
2531 5057 7.232118 AGTGCCTATAGATTTTTGCAAAAGT 57.768 32.000 22.78 20.72 0.00 2.66
2532 5058 8.243426 TGTAGTGCCTATAGATTTTTGCAAAAG 58.757 33.333 22.78 10.71 0.00 2.27
2536 5062 7.880160 AATGTAGTGCCTATAGATTTTTGCA 57.120 32.000 0.00 0.00 0.00 4.08
2537 5063 9.831737 CATAATGTAGTGCCTATAGATTTTTGC 57.168 33.333 0.00 0.00 0.00 3.68
2542 5068 8.035394 CGTTCCATAATGTAGTGCCTATAGATT 58.965 37.037 0.00 0.00 0.00 2.40
2543 5069 7.363880 CCGTTCCATAATGTAGTGCCTATAGAT 60.364 40.741 0.00 0.00 0.00 1.98
2544 5070 6.071560 CCGTTCCATAATGTAGTGCCTATAGA 60.072 42.308 0.00 0.00 0.00 1.98
2545 5071 6.071560 TCCGTTCCATAATGTAGTGCCTATAG 60.072 42.308 0.00 0.00 0.00 1.31
2546 5072 5.776208 TCCGTTCCATAATGTAGTGCCTATA 59.224 40.000 0.00 0.00 0.00 1.31
2547 5073 4.591498 TCCGTTCCATAATGTAGTGCCTAT 59.409 41.667 0.00 0.00 0.00 2.57
2550 5076 3.131396 CTCCGTTCCATAATGTAGTGCC 58.869 50.000 0.00 0.00 0.00 5.01
2551 5077 3.131396 CCTCCGTTCCATAATGTAGTGC 58.869 50.000 0.00 0.00 0.00 4.40
2552 5078 3.386726 TCCCTCCGTTCCATAATGTAGTG 59.613 47.826 0.00 0.00 0.00 2.74
2553 5079 3.641906 CTCCCTCCGTTCCATAATGTAGT 59.358 47.826 0.00 0.00 0.00 2.73
2554 5080 3.641906 ACTCCCTCCGTTCCATAATGTAG 59.358 47.826 0.00 0.00 0.00 2.74
2556 5082 2.478292 ACTCCCTCCGTTCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
2557 5083 4.891992 ATACTCCCTCCGTTCCATAATG 57.108 45.455 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.