Multiple sequence alignment - TraesCS5A01G427600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G427600 | chr5A | 100.000 | 9025 | 0 | 0 | 1 | 9025 | 612187569 | 612178545 | 0.000000e+00 | 16667.0 |
1 | TraesCS5A01G427600 | chr5A | 88.864 | 1769 | 152 | 14 | 3139 | 4902 | 612715225 | 612713497 | 0.000000e+00 | 2134.0 |
2 | TraesCS5A01G427600 | chr5A | 88.664 | 1729 | 176 | 13 | 6168 | 7894 | 612725399 | 612723689 | 0.000000e+00 | 2089.0 |
3 | TraesCS5A01G427600 | chr5A | 89.194 | 1675 | 170 | 8 | 6222 | 7894 | 612912562 | 612910897 | 0.000000e+00 | 2080.0 |
4 | TraesCS5A01G427600 | chr5A | 89.515 | 1545 | 149 | 7 | 3161 | 4699 | 613016871 | 613015334 | 0.000000e+00 | 1943.0 |
5 | TraesCS5A01G427600 | chr5A | 86.457 | 1750 | 199 | 16 | 3161 | 4909 | 612728224 | 612726512 | 0.000000e+00 | 1884.0 |
6 | TraesCS5A01G427600 | chr5A | 85.706 | 1819 | 206 | 19 | 3161 | 4976 | 612915453 | 612913686 | 0.000000e+00 | 1869.0 |
7 | TraesCS5A01G427600 | chr5A | 85.902 | 1674 | 203 | 11 | 3169 | 4836 | 612973213 | 612971567 | 0.000000e+00 | 1753.0 |
8 | TraesCS5A01G427600 | chr5A | 91.264 | 1282 | 110 | 2 | 6161 | 7441 | 612709436 | 612708156 | 0.000000e+00 | 1746.0 |
9 | TraesCS5A01G427600 | chr5A | 86.772 | 1134 | 110 | 26 | 5063 | 6172 | 612726476 | 612725359 | 0.000000e+00 | 1227.0 |
10 | TraesCS5A01G427600 | chr5A | 88.818 | 939 | 88 | 11 | 5205 | 6130 | 612710514 | 612709580 | 0.000000e+00 | 1136.0 |
11 | TraesCS5A01G427600 | chr5A | 85.832 | 1094 | 119 | 26 | 5063 | 6130 | 612913686 | 612912603 | 0.000000e+00 | 1129.0 |
12 | TraesCS5A01G427600 | chr5A | 86.611 | 956 | 104 | 16 | 5196 | 6130 | 612971307 | 612970355 | 0.000000e+00 | 1035.0 |
13 | TraesCS5A01G427600 | chr5A | 87.940 | 597 | 70 | 2 | 7313 | 7907 | 613012740 | 613012144 | 0.000000e+00 | 702.0 |
14 | TraesCS5A01G427600 | chr5A | 82.391 | 778 | 78 | 28 | 523 | 1274 | 612718887 | 612718143 | 2.770000e-174 | 623.0 |
15 | TraesCS5A01G427600 | chr5A | 93.158 | 190 | 10 | 2 | 1083 | 1269 | 612919686 | 612919497 | 8.930000e-70 | 276.0 |
16 | TraesCS5A01G427600 | chr5A | 94.382 | 178 | 7 | 1 | 1083 | 1260 | 613019671 | 613019497 | 4.150000e-68 | 270.0 |
17 | TraesCS5A01G427600 | chr5A | 81.356 | 118 | 11 | 6 | 7992 | 8105 | 546555189 | 546555079 | 1.610000e-12 | 86.1 |
18 | TraesCS5A01G427600 | chr5D | 95.853 | 4871 | 146 | 24 | 3133 | 7997 | 490516695 | 490511875 | 0.000000e+00 | 7825.0 |
19 | TraesCS5A01G427600 | chr5D | 92.749 | 1710 | 110 | 8 | 6188 | 7894 | 490597213 | 490595515 | 0.000000e+00 | 2459.0 |
20 | TraesCS5A01G427600 | chr5D | 89.146 | 1769 | 151 | 14 | 3139 | 4902 | 490602488 | 490600756 | 0.000000e+00 | 2165.0 |
21 | TraesCS5A01G427600 | chr5D | 89.134 | 1675 | 171 | 8 | 6222 | 7894 | 490760211 | 490758546 | 0.000000e+00 | 2074.0 |
22 | TraesCS5A01G427600 | chr5D | 89.845 | 1546 | 140 | 7 | 3161 | 4698 | 490938576 | 490937040 | 0.000000e+00 | 1969.0 |
23 | TraesCS5A01G427600 | chr5D | 87.041 | 1744 | 185 | 19 | 3161 | 4902 | 490763091 | 490761387 | 0.000000e+00 | 1930.0 |
24 | TraesCS5A01G427600 | chr5D | 85.457 | 1719 | 203 | 21 | 3165 | 4873 | 490777132 | 490775451 | 0.000000e+00 | 1746.0 |
25 | TraesCS5A01G427600 | chr5D | 86.636 | 1085 | 114 | 21 | 5071 | 6130 | 490761330 | 490760252 | 0.000000e+00 | 1171.0 |
26 | TraesCS5A01G427600 | chr5D | 87.566 | 941 | 98 | 12 | 5205 | 6130 | 490598306 | 490597370 | 0.000000e+00 | 1072.0 |
27 | TraesCS5A01G427600 | chr5D | 85.475 | 957 | 113 | 18 | 5196 | 6130 | 490775221 | 490774269 | 0.000000e+00 | 974.0 |
28 | TraesCS5A01G427600 | chr5D | 84.642 | 853 | 56 | 31 | 723 | 1538 | 490519771 | 490518957 | 0.000000e+00 | 780.0 |
29 | TraesCS5A01G427600 | chr5D | 88.275 | 597 | 60 | 7 | 7313 | 7907 | 490934440 | 490933852 | 0.000000e+00 | 706.0 |
30 | TraesCS5A01G427600 | chr5D | 84.181 | 708 | 51 | 25 | 1796 | 2452 | 490518316 | 490517619 | 1.650000e-176 | 630.0 |
31 | TraesCS5A01G427600 | chr5D | 83.508 | 667 | 76 | 13 | 35 | 679 | 490520423 | 490519769 | 7.800000e-165 | 592.0 |
32 | TraesCS5A01G427600 | chr5D | 85.315 | 572 | 64 | 13 | 480 | 1046 | 490607630 | 490607074 | 2.830000e-159 | 573.0 |
33 | TraesCS5A01G427600 | chr5D | 84.014 | 588 | 79 | 11 | 8424 | 9000 | 490511197 | 490510614 | 1.320000e-152 | 551.0 |
34 | TraesCS5A01G427600 | chr5D | 88.400 | 250 | 19 | 7 | 1072 | 1318 | 490607080 | 490606838 | 8.860000e-75 | 292.0 |
35 | TraesCS5A01G427600 | chr5D | 93.258 | 178 | 9 | 2 | 1083 | 1260 | 490941573 | 490941399 | 8.990000e-65 | 259.0 |
36 | TraesCS5A01G427600 | chr5D | 86.528 | 193 | 21 | 4 | 5041 | 5232 | 490600670 | 490600482 | 3.300000e-49 | 207.0 |
37 | TraesCS5A01G427600 | chr5D | 91.083 | 157 | 6 | 4 | 2673 | 2827 | 490516831 | 490516681 | 1.190000e-48 | 206.0 |
38 | TraesCS5A01G427600 | chr5D | 89.333 | 150 | 11 | 1 | 2446 | 2590 | 490517560 | 490517411 | 5.570000e-42 | 183.0 |
39 | TraesCS5A01G427600 | chr5D | 93.388 | 121 | 8 | 0 | 1531 | 1651 | 490518904 | 490518784 | 7.200000e-41 | 180.0 |
40 | TraesCS5A01G427600 | chr5D | 82.524 | 206 | 15 | 9 | 1712 | 1903 | 80064502 | 80064700 | 2.610000e-35 | 161.0 |
41 | TraesCS5A01G427600 | chr5D | 93.617 | 47 | 2 | 1 | 2599 | 2644 | 490516877 | 490516831 | 1.630000e-07 | 69.4 |
42 | TraesCS5A01G427600 | chr5D | 76.852 | 108 | 23 | 2 | 376 | 482 | 447299989 | 447299883 | 9.790000e-05 | 60.2 |
43 | TraesCS5A01G427600 | chr5B | 94.367 | 3000 | 124 | 23 | 5033 | 8019 | 605010529 | 605007562 | 0.000000e+00 | 4562.0 |
44 | TraesCS5A01G427600 | chr5B | 95.674 | 1965 | 61 | 10 | 3135 | 5087 | 605012653 | 605010701 | 0.000000e+00 | 3136.0 |
45 | TraesCS5A01G427600 | chr5B | 94.560 | 1728 | 92 | 2 | 6168 | 7893 | 605164073 | 605162346 | 0.000000e+00 | 2669.0 |
46 | TraesCS5A01G427600 | chr5B | 88.525 | 1769 | 156 | 15 | 3139 | 4901 | 605166991 | 605165264 | 0.000000e+00 | 2098.0 |
47 | TraesCS5A01G427600 | chr5B | 88.949 | 1674 | 174 | 8 | 6222 | 7893 | 605218620 | 605216956 | 0.000000e+00 | 2056.0 |
48 | TraesCS5A01G427600 | chr5B | 86.421 | 1819 | 192 | 19 | 3161 | 4976 | 605221507 | 605219741 | 0.000000e+00 | 1940.0 |
49 | TraesCS5A01G427600 | chr5B | 89.577 | 1535 | 148 | 6 | 3170 | 4698 | 605482422 | 605480894 | 0.000000e+00 | 1938.0 |
50 | TraesCS5A01G427600 | chr5B | 85.656 | 1715 | 199 | 21 | 3169 | 4873 | 605312904 | 605311227 | 0.000000e+00 | 1760.0 |
51 | TraesCS5A01G427600 | chr5B | 86.599 | 1567 | 123 | 35 | 35 | 1540 | 605016736 | 605015196 | 0.000000e+00 | 1650.0 |
52 | TraesCS5A01G427600 | chr5B | 86.126 | 1146 | 126 | 19 | 5041 | 6163 | 605165174 | 605164039 | 0.000000e+00 | 1205.0 |
53 | TraesCS5A01G427600 | chr5B | 86.239 | 1090 | 119 | 21 | 5063 | 6130 | 605219741 | 605218661 | 0.000000e+00 | 1153.0 |
54 | TraesCS5A01G427600 | chr5B | 85.162 | 957 | 116 | 18 | 5196 | 6130 | 605310998 | 605310046 | 0.000000e+00 | 957.0 |
55 | TraesCS5A01G427600 | chr5B | 85.412 | 946 | 98 | 15 | 8105 | 9025 | 605006379 | 605005449 | 0.000000e+00 | 946.0 |
56 | TraesCS5A01G427600 | chr5B | 82.834 | 967 | 130 | 20 | 5196 | 6130 | 605480531 | 605479569 | 0.000000e+00 | 833.0 |
57 | TraesCS5A01G427600 | chr5B | 88.275 | 597 | 59 | 9 | 7313 | 7907 | 605478328 | 605477741 | 0.000000e+00 | 704.0 |
58 | TraesCS5A01G427600 | chr5B | 84.818 | 494 | 47 | 16 | 841 | 1318 | 605169661 | 605169180 | 1.060000e-128 | 472.0 |
59 | TraesCS5A01G427600 | chr5B | 80.534 | 524 | 41 | 22 | 1770 | 2240 | 605014641 | 605014126 | 6.710000e-91 | 346.0 |
60 | TraesCS5A01G427600 | chr5B | 92.513 | 187 | 11 | 1 | 1083 | 1269 | 605224809 | 605224626 | 1.930000e-66 | 265.0 |
61 | TraesCS5A01G427600 | chr5B | 92.857 | 126 | 4 | 3 | 2328 | 2452 | 605013913 | 605013792 | 2.590000e-40 | 178.0 |
62 | TraesCS5A01G427600 | chr5B | 90.076 | 131 | 8 | 1 | 2465 | 2590 | 605013722 | 605013592 | 2.020000e-36 | 165.0 |
63 | TraesCS5A01G427600 | chr5B | 85.185 | 135 | 11 | 2 | 2599 | 2732 | 605013083 | 605012957 | 7.350000e-26 | 130.0 |
64 | TraesCS5A01G427600 | chr5B | 85.593 | 118 | 16 | 1 | 2554 | 2670 | 605168140 | 605168023 | 1.230000e-23 | 122.0 |
65 | TraesCS5A01G427600 | chr5B | 81.731 | 104 | 16 | 3 | 8922 | 9023 | 57705996 | 57705894 | 5.810000e-12 | 84.2 |
66 | TraesCS5A01G427600 | chr5B | 88.235 | 68 | 7 | 1 | 8106 | 8172 | 654926950 | 654927017 | 7.510000e-11 | 80.5 |
67 | TraesCS5A01G427600 | chr5B | 83.750 | 80 | 8 | 3 | 1531 | 1609 | 605015162 | 605015087 | 4.520000e-08 | 71.3 |
68 | TraesCS5A01G427600 | chr5B | 94.872 | 39 | 2 | 0 | 1613 | 1651 | 605015059 | 605015021 | 2.720000e-05 | 62.1 |
69 | TraesCS5A01G427600 | chr3B | 95.738 | 305 | 12 | 1 | 2829 | 3132 | 606376354 | 606376050 | 2.930000e-134 | 490.0 |
70 | TraesCS5A01G427600 | chr4A | 95.425 | 306 | 13 | 1 | 2828 | 3132 | 629493603 | 629493298 | 3.790000e-133 | 486.0 |
71 | TraesCS5A01G427600 | chr4A | 82.039 | 206 | 16 | 10 | 1712 | 1903 | 509788553 | 509788751 | 1.210000e-33 | 156.0 |
72 | TraesCS5A01G427600 | chr7A | 95.082 | 305 | 15 | 0 | 2829 | 3133 | 732945998 | 732945694 | 1.760000e-131 | 481.0 |
73 | TraesCS5A01G427600 | chr7A | 93.631 | 314 | 18 | 2 | 2820 | 3133 | 8660161 | 8660472 | 1.370000e-127 | 468.0 |
74 | TraesCS5A01G427600 | chr7A | 81.387 | 274 | 50 | 1 | 34 | 306 | 594429784 | 594430057 | 1.180000e-53 | 222.0 |
75 | TraesCS5A01G427600 | chr7A | 83.824 | 136 | 17 | 2 | 35 | 170 | 628527815 | 628527945 | 3.420000e-24 | 124.0 |
76 | TraesCS5A01G427600 | chr1A | 95.082 | 305 | 14 | 1 | 2829 | 3132 | 344164685 | 344164989 | 6.340000e-131 | 479.0 |
77 | TraesCS5A01G427600 | chr1A | 89.189 | 74 | 6 | 2 | 8105 | 8177 | 575387104 | 575387176 | 3.470000e-14 | 91.6 |
78 | TraesCS5A01G427600 | chr1A | 82.653 | 98 | 12 | 5 | 8078 | 8172 | 407329353 | 407329448 | 2.090000e-11 | 82.4 |
79 | TraesCS5A01G427600 | chr2B | 94.771 | 306 | 16 | 0 | 2828 | 3133 | 593006295 | 593005990 | 2.280000e-130 | 477.0 |
80 | TraesCS5A01G427600 | chr2B | 75.824 | 182 | 32 | 11 | 8386 | 8561 | 673007061 | 673007236 | 2.090000e-11 | 82.4 |
81 | TraesCS5A01G427600 | chr4D | 95.033 | 302 | 14 | 1 | 2829 | 3129 | 459568657 | 459568958 | 2.950000e-129 | 473.0 |
82 | TraesCS5A01G427600 | chr4D | 81.553 | 206 | 16 | 10 | 1712 | 1903 | 87364477 | 87364280 | 5.640000e-32 | 150.0 |
83 | TraesCS5A01G427600 | chr3A | 94.463 | 307 | 16 | 1 | 2829 | 3134 | 27554830 | 27554524 | 1.060000e-128 | 472.0 |
84 | TraesCS5A01G427600 | chr3A | 77.295 | 207 | 23 | 10 | 7973 | 8175 | 46569027 | 46569213 | 5.770000e-17 | 100.0 |
85 | TraesCS5A01G427600 | chr3A | 78.049 | 123 | 18 | 5 | 8407 | 8526 | 714958404 | 714958288 | 1.630000e-07 | 69.4 |
86 | TraesCS5A01G427600 | chrUn | 92.097 | 329 | 24 | 2 | 2825 | 3152 | 200950516 | 200950189 | 6.380000e-126 | 462.0 |
87 | TraesCS5A01G427600 | chrUn | 83.981 | 206 | 12 | 9 | 1712 | 1903 | 466452046 | 466451848 | 2.590000e-40 | 178.0 |
88 | TraesCS5A01G427600 | chr3D | 83.841 | 328 | 47 | 5 | 26 | 350 | 102207477 | 102207801 | 3.170000e-79 | 307.0 |
89 | TraesCS5A01G427600 | chr1B | 84.298 | 242 | 33 | 5 | 35 | 273 | 397996712 | 397996473 | 1.960000e-56 | 231.0 |
90 | TraesCS5A01G427600 | chr1B | 82.239 | 259 | 40 | 3 | 35 | 287 | 399005401 | 399005659 | 1.530000e-52 | 219.0 |
91 | TraesCS5A01G427600 | chr1B | 83.981 | 206 | 12 | 9 | 1712 | 1903 | 619204587 | 619204785 | 2.590000e-40 | 178.0 |
92 | TraesCS5A01G427600 | chr1B | 83.981 | 206 | 12 | 9 | 1712 | 1903 | 668824787 | 668824589 | 2.590000e-40 | 178.0 |
93 | TraesCS5A01G427600 | chr6A | 83.981 | 206 | 12 | 9 | 1712 | 1903 | 84427330 | 84427528 | 2.590000e-40 | 178.0 |
94 | TraesCS5A01G427600 | chr6A | 83.981 | 206 | 12 | 9 | 1712 | 1903 | 597243455 | 597243257 | 2.590000e-40 | 178.0 |
95 | TraesCS5A01G427600 | chr6A | 84.211 | 95 | 11 | 3 | 390 | 482 | 607853227 | 607853135 | 1.250000e-13 | 89.8 |
96 | TraesCS5A01G427600 | chr6D | 83.495 | 206 | 13 | 9 | 1712 | 1903 | 458950630 | 458950828 | 1.200000e-38 | 172.0 |
97 | TraesCS5A01G427600 | chr6D | 88.889 | 63 | 5 | 2 | 4989 | 5049 | 1641027 | 1640965 | 9.720000e-10 | 76.8 |
98 | TraesCS5A01G427600 | chr4B | 83.010 | 206 | 14 | 9 | 1712 | 1903 | 209097381 | 209097183 | 5.600000e-37 | 167.0 |
99 | TraesCS5A01G427600 | chr4B | 83.516 | 91 | 10 | 5 | 8107 | 8195 | 27124492 | 27124405 | 7.510000e-11 | 80.5 |
100 | TraesCS5A01G427600 | chr7B | 80.660 | 212 | 37 | 4 | 8814 | 9023 | 67357674 | 67357883 | 2.610000e-35 | 161.0 |
101 | TraesCS5A01G427600 | chr7B | 76.279 | 215 | 44 | 7 | 8810 | 9020 | 503152006 | 503152217 | 3.450000e-19 | 108.0 |
102 | TraesCS5A01G427600 | chr7B | 85.000 | 100 | 13 | 1 | 8921 | 9018 | 524726707 | 524726608 | 5.770000e-17 | 100.0 |
103 | TraesCS5A01G427600 | chr7B | 89.855 | 69 | 6 | 1 | 8106 | 8173 | 583387394 | 583387462 | 4.490000e-13 | 87.9 |
104 | TraesCS5A01G427600 | chr7B | 100.000 | 30 | 0 | 0 | 453 | 482 | 837266 | 837295 | 1.000000e-03 | 56.5 |
105 | TraesCS5A01G427600 | chr7D | 87.379 | 103 | 12 | 1 | 8922 | 9023 | 496373767 | 496373665 | 5.730000e-22 | 117.0 |
106 | TraesCS5A01G427600 | chr7D | 93.443 | 61 | 4 | 0 | 8113 | 8173 | 568233278 | 568233338 | 3.470000e-14 | 91.6 |
107 | TraesCS5A01G427600 | chr2A | 80.769 | 156 | 23 | 4 | 8397 | 8550 | 689209060 | 689208910 | 2.060000e-21 | 115.0 |
108 | TraesCS5A01G427600 | chr2A | 84.615 | 104 | 9 | 6 | 8922 | 9022 | 389438048 | 389438147 | 7.460000e-16 | 97.1 |
109 | TraesCS5A01G427600 | chr6B | 88.889 | 72 | 7 | 1 | 8105 | 8175 | 142631611 | 142631682 | 4.490000e-13 | 87.9 |
110 | TraesCS5A01G427600 | chr6B | 83.000 | 100 | 12 | 5 | 8927 | 9023 | 146652273 | 146652176 | 1.610000e-12 | 86.1 |
111 | TraesCS5A01G427600 | chr2D | 81.915 | 94 | 6 | 8 | 8061 | 8154 | 60544749 | 60544831 | 1.630000e-07 | 69.4 |
112 | TraesCS5A01G427600 | chr2D | 96.875 | 32 | 1 | 0 | 8735 | 8766 | 94552425 | 94552394 | 5.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G427600 | chr5A | 612178545 | 612187569 | 9024 | True | 16667.000000 | 16667 | 100.000000 | 1 | 9025 | 1 | chr5A.!!$R2 | 9024 |
1 | TraesCS5A01G427600 | chr5A | 612723689 | 612728224 | 4535 | True | 1733.333333 | 2089 | 87.297667 | 3161 | 7894 | 3 | chr5A.!!$R5 | 4733 |
2 | TraesCS5A01G427600 | chr5A | 612910897 | 612915453 | 4556 | True | 1692.666667 | 2080 | 86.910667 | 3161 | 7894 | 3 | chr5A.!!$R6 | 4733 |
3 | TraesCS5A01G427600 | chr5A | 612708156 | 612718887 | 10731 | True | 1409.750000 | 2134 | 87.834250 | 523 | 7441 | 4 | chr5A.!!$R4 | 6918 |
4 | TraesCS5A01G427600 | chr5A | 612970355 | 612973213 | 2858 | True | 1394.000000 | 1753 | 86.256500 | 3169 | 6130 | 2 | chr5A.!!$R7 | 2961 |
5 | TraesCS5A01G427600 | chr5A | 613012144 | 613019671 | 7527 | True | 971.666667 | 1943 | 90.612333 | 1083 | 7907 | 3 | chr5A.!!$R8 | 6824 |
6 | TraesCS5A01G427600 | chr5D | 490758546 | 490763091 | 4545 | True | 1725.000000 | 2074 | 87.603667 | 3161 | 7894 | 3 | chr5D.!!$R5 | 4733 |
7 | TraesCS5A01G427600 | chr5D | 490595515 | 490602488 | 6973 | True | 1475.750000 | 2459 | 88.997250 | 3139 | 7894 | 4 | chr5D.!!$R3 | 4755 |
8 | TraesCS5A01G427600 | chr5D | 490774269 | 490777132 | 2863 | True | 1360.000000 | 1746 | 85.466000 | 3165 | 6130 | 2 | chr5D.!!$R6 | 2965 |
9 | TraesCS5A01G427600 | chr5D | 490510614 | 490520423 | 9809 | True | 1224.044444 | 7825 | 88.846556 | 35 | 9000 | 9 | chr5D.!!$R2 | 8965 |
10 | TraesCS5A01G427600 | chr5D | 490933852 | 490941573 | 7721 | True | 978.000000 | 1969 | 90.459333 | 1083 | 7907 | 3 | chr5D.!!$R7 | 6824 |
11 | TraesCS5A01G427600 | chr5D | 490606838 | 490607630 | 792 | True | 432.500000 | 573 | 86.857500 | 480 | 1318 | 2 | chr5D.!!$R4 | 838 |
12 | TraesCS5A01G427600 | chr5B | 605310046 | 605312904 | 2858 | True | 1358.500000 | 1760 | 85.409000 | 3169 | 6130 | 2 | chr5B.!!$R5 | 2961 |
13 | TraesCS5A01G427600 | chr5B | 605216956 | 605224809 | 7853 | True | 1353.500000 | 2056 | 88.530500 | 1083 | 7893 | 4 | chr5B.!!$R4 | 6810 |
14 | TraesCS5A01G427600 | chr5B | 605162346 | 605169661 | 7315 | True | 1313.200000 | 2669 | 87.924400 | 841 | 7893 | 5 | chr5B.!!$R3 | 7052 |
15 | TraesCS5A01G427600 | chr5B | 605477741 | 605482422 | 4681 | True | 1158.333333 | 1938 | 86.895333 | 3170 | 7907 | 3 | chr5B.!!$R6 | 4737 |
16 | TraesCS5A01G427600 | chr5B | 605005449 | 605016736 | 11287 | True | 1124.640000 | 4562 | 88.932600 | 35 | 9025 | 10 | chr5B.!!$R2 | 8990 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
123 | 124 | 0.038251 | GCTGGCTAAGGTTTTGTGGC | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 | F |
428 | 451 | 0.100325 | CGGTGTTTTTGTCTGCAGCA | 59.900 | 50.000 | 9.47 | 7.85 | 0.00 | 4.41 | F |
438 | 461 | 0.459489 | GTCTGCAGCAACCCAAACAA | 59.541 | 50.000 | 9.47 | 0.00 | 0.00 | 2.83 | F |
563 | 588 | 0.541863 | AACATAGCTTGGGACTCCGG | 59.458 | 55.000 | 0.00 | 0.00 | 35.24 | 5.14 | F |
1422 | 1682 | 0.676736 | TGTGCACGTAGGACATCACA | 59.323 | 50.000 | 13.13 | 0.00 | 44.19 | 3.58 | F |
2681 | 6179 | 0.118346 | TAGTGGGAGTGTGGGACCAT | 59.882 | 55.000 | 0.00 | 0.00 | 35.13 | 3.55 | F |
3087 | 10141 | 0.037590 | TTGAACCCTGGTGGATTCGG | 59.962 | 55.000 | 0.00 | 0.00 | 38.00 | 4.30 | F |
3637 | 10700 | 0.250295 | CTGGAAGAAAGGCACCGACA | 60.250 | 55.000 | 0.00 | 0.00 | 34.07 | 4.35 | F |
3720 | 10795 | 0.537188 | TCAAGTCCGAGATCAAGGGC | 59.463 | 55.000 | 3.20 | 3.20 | 0.00 | 5.19 | F |
3732 | 10807 | 1.988293 | TCAAGGGCCAAATGAACGAA | 58.012 | 45.000 | 6.18 | 0.00 | 0.00 | 3.85 | F |
3738 | 10813 | 2.035321 | GGGCCAAATGAACGAAAACTCA | 59.965 | 45.455 | 4.39 | 0.00 | 0.00 | 3.41 | F |
5117 | 12382 | 2.098117 | GCACAATGGTTCTATCAGTGCC | 59.902 | 50.000 | 0.00 | 0.00 | 43.54 | 5.01 | F |
6390 | 17005 | 1.364901 | GTCGGGTTCAAGTCGGACA | 59.635 | 57.895 | 11.27 | 0.00 | 34.65 | 4.02 | F |
6783 | 17398 | 2.037367 | AGTACCAGAGCAGGGCGA | 59.963 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1923 | 3463 | 0.034896 | GAGCAGGTTGGAAAGTCGGA | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 | R |
1924 | 3464 | 0.035458 | AGAGCAGGTTGGAAAGTCGG | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 | R |
2196 | 4035 | 1.066858 | AGGCCGAGTGTAGTGACAATG | 60.067 | 52.381 | 0.00 | 0.00 | 37.31 | 2.82 | R |
2449 | 5089 | 0.389025 | CTGGCCACCAAACAGGAAAC | 59.611 | 55.000 | 0.00 | 0.00 | 41.22 | 2.78 | R |
2906 | 9155 | 0.104934 | AGGTGCTCATAGGGGTAGGG | 60.105 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 | R |
3649 | 10712 | 0.462759 | GAGTATTCCGGCAGCTTGCT | 60.463 | 55.000 | 0.00 | 0.00 | 44.28 | 3.91 | R |
4494 | 11577 | 1.153842 | TATCACAGGCGCACTCACG | 60.154 | 57.895 | 10.83 | 0.00 | 0.00 | 4.35 | R |
5578 | 15866 | 3.621715 | GGCAAAGGATACGGTAAGTTCAG | 59.378 | 47.826 | 0.00 | 0.00 | 46.39 | 3.02 | R |
5581 | 15869 | 3.706600 | TGGCAAAGGATACGGTAAGTT | 57.293 | 42.857 | 0.00 | 0.00 | 46.39 | 2.66 | R |
5739 | 16037 | 1.142870 | CCGAGGAGCAAAATATGGGGA | 59.857 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 | R |
5835 | 16133 | 5.355071 | TGAAACTAACAATGCAGCATCCTAG | 59.645 | 40.000 | 8.77 | 11.71 | 0.00 | 3.02 | R |
6403 | 17018 | 0.389817 | CCCAAGATCGACGTGCAGAA | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 | R |
7581 | 18386 | 0.177836 | TATGTCCAGGTGCCATCGTG | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 | R |
8517 | 20794 | 0.108585 | ACTGGGCGTGAAACACAGAT | 59.891 | 50.000 | 0.00 | 0.00 | 36.57 | 2.90 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 4.752879 | GGTGGCTTGCCGCGTCTA | 62.753 | 66.667 | 17.49 | 0.00 | 40.44 | 2.59 |
23 | 24 | 3.188786 | GTGGCTTGCCGCGTCTAG | 61.189 | 66.667 | 9.54 | 0.00 | 40.44 | 2.43 |
27 | 28 | 4.492160 | CTTGCCGCGTCTAGCCGA | 62.492 | 66.667 | 4.92 | 0.00 | 44.76 | 5.54 |
28 | 29 | 4.789075 | TTGCCGCGTCTAGCCGAC | 62.789 | 66.667 | 4.92 | 0.00 | 44.76 | 4.79 |
63 | 64 | 2.531483 | CTTCCTCCCTCCCTTCCCGA | 62.531 | 65.000 | 0.00 | 0.00 | 0.00 | 5.14 |
88 | 89 | 4.664062 | GCCCATGGCTTTGCTAGA | 57.336 | 55.556 | 6.09 | 0.00 | 46.69 | 2.43 |
112 | 113 | 4.431131 | GGCTGGCTGGCTGGCTAA | 62.431 | 66.667 | 23.10 | 0.00 | 42.34 | 3.09 |
119 | 120 | 0.244721 | GCTGGCTGGCTAAGGTTTTG | 59.755 | 55.000 | 2.00 | 0.00 | 0.00 | 2.44 |
123 | 124 | 0.038251 | GCTGGCTAAGGTTTTGTGGC | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
125 | 126 | 0.105964 | TGGCTAAGGTTTTGTGGCCA | 60.106 | 50.000 | 0.00 | 0.00 | 45.81 | 5.36 |
129 | 130 | 0.824182 | TAAGGTTTTGTGGCCACCGG | 60.824 | 55.000 | 32.62 | 0.00 | 35.54 | 5.28 |
147 | 148 | 1.262640 | GGCGAGGGAGTAAAGGTGGA | 61.263 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
176 | 178 | 0.965866 | ACGAGAAGTGGATGAGCCGA | 60.966 | 55.000 | 0.00 | 0.00 | 40.66 | 5.54 |
181 | 183 | 3.399181 | GTGGATGAGCCGACCCCA | 61.399 | 66.667 | 0.00 | 0.00 | 40.66 | 4.96 |
198 | 200 | 2.508439 | ACCGCACGCGTCCATTAG | 60.508 | 61.111 | 9.86 | 0.00 | 37.81 | 1.73 |
216 | 218 | 4.388499 | AAAGGACGGGCACGCGAT | 62.388 | 61.111 | 15.93 | 0.00 | 46.04 | 4.58 |
237 | 239 | 2.963928 | CTTCCACACACTGCCAGGCA | 62.964 | 60.000 | 15.23 | 15.23 | 36.92 | 4.75 |
271 | 273 | 2.093152 | GTGGCTGTGTTTAATACGACCG | 59.907 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
280 | 282 | 1.929230 | TAATACGACCGCATGTGGTG | 58.071 | 50.000 | 34.86 | 25.93 | 44.01 | 4.17 |
281 | 283 | 0.248012 | AATACGACCGCATGTGGTGA | 59.752 | 50.000 | 34.86 | 19.52 | 44.01 | 4.02 |
306 | 308 | 4.643387 | GCTGACTTGTGGGGCCGT | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
308 | 310 | 3.164977 | TGACTTGTGGGGCCGTGA | 61.165 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
311 | 313 | 4.308458 | CTTGTGGGGCCGTGACGA | 62.308 | 66.667 | 6.54 | 0.00 | 0.00 | 4.20 |
316 | 318 | 4.309950 | GGGGCCGTGACGAACACT | 62.310 | 66.667 | 6.54 | 0.00 | 46.24 | 3.55 |
321 | 323 | 1.658114 | CCGTGACGAACACTGAGGA | 59.342 | 57.895 | 6.54 | 0.00 | 46.24 | 3.71 |
325 | 327 | 1.521423 | GTGACGAACACTGAGGAAACG | 59.479 | 52.381 | 9.42 | 0.00 | 45.13 | 3.60 |
330 | 332 | 2.733218 | CACTGAGGAAACGCGCGA | 60.733 | 61.111 | 39.36 | 11.43 | 0.00 | 5.87 |
356 | 379 | 4.304110 | GTCCACTTCGTGTCTGAAATGTA | 58.696 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
358 | 381 | 5.408604 | GTCCACTTCGTGTCTGAAATGTATT | 59.591 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
360 | 383 | 5.390885 | CCACTTCGTGTCTGAAATGTATTGG | 60.391 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
363 | 386 | 2.415168 | CGTGTCTGAAATGTATTGGCGT | 59.585 | 45.455 | 0.00 | 0.00 | 0.00 | 5.68 |
388 | 411 | 0.871722 | CGAAGTGGACGCAATTTGGA | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
396 | 419 | 2.289382 | GGACGCAATTTGGATTTGGGTT | 60.289 | 45.455 | 7.41 | 0.00 | 0.00 | 4.11 |
425 | 448 | 0.736053 | GACCGGTGTTTTTGTCTGCA | 59.264 | 50.000 | 14.63 | 0.00 | 0.00 | 4.41 |
428 | 451 | 0.100325 | CGGTGTTTTTGTCTGCAGCA | 59.900 | 50.000 | 9.47 | 7.85 | 0.00 | 4.41 |
438 | 461 | 0.459489 | GTCTGCAGCAACCCAAACAA | 59.541 | 50.000 | 9.47 | 0.00 | 0.00 | 2.83 |
444 | 467 | 1.135257 | CAGCAACCCAAACAAACGTGA | 60.135 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
462 | 485 | 0.802494 | GAACGTGCCAAATGGATCGT | 59.198 | 50.000 | 2.98 | 9.71 | 43.52 | 3.73 |
491 | 514 | 5.423015 | TGGAGTTGCTCTTAGTGATCATTC | 58.577 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
493 | 516 | 5.523188 | GGAGTTGCTCTTAGTGATCATTCTG | 59.477 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
498 | 521 | 5.871524 | TGCTCTTAGTGATCATTCTGTTGAC | 59.128 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
510 | 533 | 3.662759 | TCTGTTGACCCCTTCAAAGTT | 57.337 | 42.857 | 0.00 | 0.00 | 46.09 | 2.66 |
514 | 539 | 5.079689 | TGTTGACCCCTTCAAAGTTTTTC | 57.920 | 39.130 | 0.00 | 0.00 | 46.09 | 2.29 |
516 | 541 | 5.247337 | TGTTGACCCCTTCAAAGTTTTTCTT | 59.753 | 36.000 | 0.00 | 0.00 | 46.09 | 2.52 |
517 | 542 | 6.170506 | GTTGACCCCTTCAAAGTTTTTCTTT | 58.829 | 36.000 | 0.00 | 0.00 | 46.09 | 2.52 |
518 | 543 | 6.367374 | TGACCCCTTCAAAGTTTTTCTTTT | 57.633 | 33.333 | 0.00 | 0.00 | 42.95 | 2.27 |
519 | 544 | 6.403049 | TGACCCCTTCAAAGTTTTTCTTTTC | 58.597 | 36.000 | 0.00 | 0.00 | 42.95 | 2.29 |
520 | 545 | 5.741011 | ACCCCTTCAAAGTTTTTCTTTTCC | 58.259 | 37.500 | 0.00 | 0.00 | 42.95 | 3.13 |
562 | 587 | 2.403252 | AAACATAGCTTGGGACTCCG | 57.597 | 50.000 | 0.00 | 0.00 | 35.24 | 4.63 |
563 | 588 | 0.541863 | AACATAGCTTGGGACTCCGG | 59.458 | 55.000 | 0.00 | 0.00 | 35.24 | 5.14 |
597 | 622 | 1.860676 | TTGCTAGTTGTCGGTGTGTC | 58.139 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
629 | 654 | 2.095853 | CGCGTTGATTTTGGCTCTATGT | 59.904 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
696 | 721 | 6.302535 | TGAATCCTCCCTACGTTTCATTTA | 57.697 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
785 | 813 | 1.271001 | TGGCAGTGTGTCATCTTCAGG | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
1009 | 1055 | 1.635844 | TCGAAATCGCGCTGTACAAT | 58.364 | 45.000 | 5.56 | 0.00 | 39.60 | 2.71 |
1010 | 1056 | 1.996898 | TCGAAATCGCGCTGTACAATT | 59.003 | 42.857 | 5.56 | 0.00 | 39.60 | 2.32 |
1011 | 1057 | 2.413796 | TCGAAATCGCGCTGTACAATTT | 59.586 | 40.909 | 5.56 | 0.00 | 39.60 | 1.82 |
1012 | 1058 | 2.770865 | CGAAATCGCGCTGTACAATTTC | 59.229 | 45.455 | 15.44 | 15.44 | 34.51 | 2.17 |
1013 | 1059 | 2.435685 | AATCGCGCTGTACAATTTCG | 57.564 | 45.000 | 5.56 | 0.00 | 0.00 | 3.46 |
1014 | 1060 | 1.635844 | ATCGCGCTGTACAATTTCGA | 58.364 | 45.000 | 5.56 | 4.44 | 0.00 | 3.71 |
1018 | 1064 | 1.933853 | GCGCTGTACAATTTCGATCCT | 59.066 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
1047 | 1109 | 2.730672 | GCGCGCACTTGGTGAGTAG | 61.731 | 63.158 | 29.10 | 0.00 | 36.65 | 2.57 |
1288 | 1375 | 3.675225 | ACCGCTCGATTCATTTCATATCG | 59.325 | 43.478 | 0.00 | 0.00 | 41.75 | 2.92 |
1318 | 1449 | 0.782384 | TTCTTCTTTCGCTCGTTCGC | 59.218 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1388 | 1520 | 2.037511 | TCGATCAAACCGGTACCAGTTT | 59.962 | 45.455 | 18.68 | 18.68 | 36.65 | 2.66 |
1422 | 1682 | 0.676736 | TGTGCACGTAGGACATCACA | 59.323 | 50.000 | 13.13 | 0.00 | 44.19 | 3.58 |
1472 | 2085 | 5.752650 | TCCTCGTCTCTGGTTCTTCTATAA | 58.247 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
1474 | 2087 | 6.487331 | TCCTCGTCTCTGGTTCTTCTATAATC | 59.513 | 42.308 | 0.00 | 0.00 | 0.00 | 1.75 |
1477 | 2090 | 7.932335 | TCGTCTCTGGTTCTTCTATAATCTTC | 58.068 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
1478 | 2091 | 7.776030 | TCGTCTCTGGTTCTTCTATAATCTTCT | 59.224 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
1480 | 2093 | 9.744468 | GTCTCTGGTTCTTCTATAATCTTCTTC | 57.256 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
1481 | 2094 | 9.707957 | TCTCTGGTTCTTCTATAATCTTCTTCT | 57.292 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
1575 | 2254 | 1.843992 | GCAATTGTTGGATCGATGGC | 58.156 | 50.000 | 0.54 | 0.00 | 0.00 | 4.40 |
1596 | 2275 | 1.131826 | GTTCATCAAACGCGGACCG | 59.868 | 57.895 | 12.47 | 10.29 | 44.21 | 4.79 |
1685 | 2427 | 3.737850 | GCGATCTCCTTGGATTCTGATT | 58.262 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
1707 | 2453 | 1.430632 | CTTGATCCCATGCACACGC | 59.569 | 57.895 | 0.00 | 0.00 | 39.24 | 5.34 |
1715 | 2461 | 2.899838 | ATGCACACGCCACGTTGT | 60.900 | 55.556 | 0.00 | 0.00 | 38.32 | 3.32 |
1724 | 2470 | 2.906161 | CACGCCACGTTGTTAATTTAGC | 59.094 | 45.455 | 0.00 | 0.00 | 38.32 | 3.09 |
1774 | 3308 | 2.896685 | CTCTCCATAAGAGGGTAGGCAG | 59.103 | 54.545 | 0.00 | 0.00 | 46.73 | 4.85 |
1783 | 3317 | 3.372897 | AGAGGGTAGGCAGGTAGTTTAC | 58.627 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
1808 | 3348 | 1.411216 | GGGACCCTCTGGAGATCGTAA | 60.411 | 57.143 | 2.09 | 0.00 | 34.81 | 3.18 |
1822 | 3362 | 3.819337 | AGATCGTAATCCGGATTTCTCGA | 59.181 | 43.478 | 32.41 | 32.41 | 37.11 | 4.04 |
1946 | 3519 | 2.421619 | GACTTTCCAACCTGCTCTCAG | 58.578 | 52.381 | 0.00 | 0.00 | 40.02 | 3.35 |
2023 | 3663 | 3.669122 | CGCGTATAACTTCATGTAGGAGC | 59.331 | 47.826 | 0.00 | 0.00 | 0.00 | 4.70 |
2058 | 3765 | 5.048713 | ACTTTGCAGTTTAGTGGCAGTATTC | 60.049 | 40.000 | 2.28 | 0.02 | 38.97 | 1.75 |
2079 | 3788 | 7.583860 | ATTCTCTTCGCTGTAAGTTTACTTC | 57.416 | 36.000 | 0.00 | 0.00 | 37.40 | 3.01 |
2135 | 3941 | 8.986477 | TTAACTTTACCTACTATCAAACGACC | 57.014 | 34.615 | 0.00 | 0.00 | 0.00 | 4.79 |
2189 | 4028 | 1.029947 | AGCGGAAATAACCTTGCCCG | 61.030 | 55.000 | 0.00 | 0.00 | 39.88 | 6.13 |
2195 | 4034 | 1.303091 | AATAACCTTGCCCGACACGC | 61.303 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2196 | 4035 | 3.887335 | TAACCTTGCCCGACACGCC | 62.887 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
2241 | 4682 | 4.630505 | GCGATGTGACCGAGATATACTAGA | 59.369 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
2300 | 4741 | 8.308207 | TGCTACCTTGGAACCAAAATATAAAAC | 58.692 | 33.333 | 7.68 | 0.00 | 35.33 | 2.43 |
2449 | 5089 | 0.319297 | GACAAAAGGCTGCCTTGCTG | 60.319 | 55.000 | 32.89 | 30.44 | 43.92 | 4.41 |
2469 | 5110 | 1.398958 | TTTCCTGTTTGGTGGCCAGC | 61.399 | 55.000 | 28.15 | 28.15 | 33.81 | 4.85 |
2519 | 5175 | 2.051345 | CTTTGGCGCGTGTTCCAC | 60.051 | 61.111 | 8.43 | 0.00 | 30.97 | 4.02 |
2587 | 5292 | 1.473258 | TGCCCATATCAACTTGGCAC | 58.527 | 50.000 | 0.00 | 0.00 | 46.57 | 5.01 |
2647 | 6145 | 3.314541 | ACACTTTACAGAACTAGCCCG | 57.685 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
2670 | 6168 | 4.200092 | GCAAAGGAGGTAATTAGTGGGAG | 58.800 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2672 | 6170 | 5.186198 | CAAAGGAGGTAATTAGTGGGAGTG | 58.814 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
2675 | 6173 | 3.118371 | GGAGGTAATTAGTGGGAGTGTGG | 60.118 | 52.174 | 0.00 | 0.00 | 0.00 | 4.17 |
2679 | 6177 | 1.286248 | ATTAGTGGGAGTGTGGGACC | 58.714 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2681 | 6179 | 0.118346 | TAGTGGGAGTGTGGGACCAT | 59.882 | 55.000 | 0.00 | 0.00 | 35.13 | 3.55 |
2682 | 6180 | 1.002134 | GTGGGAGTGTGGGACCATG | 60.002 | 63.158 | 0.00 | 0.00 | 35.13 | 3.66 |
2684 | 6182 | 1.002134 | GGGAGTGTGGGACCATGTG | 60.002 | 63.158 | 0.00 | 0.00 | 0.00 | 3.21 |
2685 | 6183 | 1.675641 | GGAGTGTGGGACCATGTGC | 60.676 | 63.158 | 0.00 | 0.00 | 0.00 | 4.57 |
2726 | 8749 | 6.478588 | CCTTTTAGCGTGAATTATGTGAGAC | 58.521 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2769 | 9016 | 6.426937 | GGCCGATTCTAGCTGAAATTAACATA | 59.573 | 38.462 | 0.00 | 0.00 | 38.29 | 2.29 |
2770 | 9017 | 7.119846 | GGCCGATTCTAGCTGAAATTAACATAT | 59.880 | 37.037 | 0.00 | 0.00 | 38.29 | 1.78 |
2771 | 9018 | 9.151471 | GCCGATTCTAGCTGAAATTAACATATA | 57.849 | 33.333 | 0.00 | 0.00 | 38.29 | 0.86 |
2855 | 9104 | 6.785488 | TTTTAGCATCAGTACAGACACAAG | 57.215 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2856 | 9105 | 2.693069 | AGCATCAGTACAGACACAAGC | 58.307 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
2857 | 9106 | 1.391485 | GCATCAGTACAGACACAAGCG | 59.609 | 52.381 | 0.00 | 0.00 | 0.00 | 4.68 |
2858 | 9107 | 1.391485 | CATCAGTACAGACACAAGCGC | 59.609 | 52.381 | 0.00 | 0.00 | 0.00 | 5.92 |
2860 | 9109 | 1.063806 | CAGTACAGACACAAGCGCTC | 58.936 | 55.000 | 12.06 | 0.00 | 0.00 | 5.03 |
2861 | 9110 | 0.673985 | AGTACAGACACAAGCGCTCA | 59.326 | 50.000 | 12.06 | 0.00 | 0.00 | 4.26 |
2862 | 9111 | 1.273606 | AGTACAGACACAAGCGCTCAT | 59.726 | 47.619 | 12.06 | 0.00 | 0.00 | 2.90 |
2863 | 9112 | 2.492088 | AGTACAGACACAAGCGCTCATA | 59.508 | 45.455 | 12.06 | 0.00 | 0.00 | 2.15 |
2864 | 9113 | 2.680312 | ACAGACACAAGCGCTCATAT | 57.320 | 45.000 | 12.06 | 0.00 | 0.00 | 1.78 |
2865 | 9114 | 3.801114 | ACAGACACAAGCGCTCATATA | 57.199 | 42.857 | 12.06 | 0.00 | 0.00 | 0.86 |
2866 | 9115 | 3.448686 | ACAGACACAAGCGCTCATATAC | 58.551 | 45.455 | 12.06 | 1.00 | 0.00 | 1.47 |
2867 | 9116 | 3.119137 | ACAGACACAAGCGCTCATATACA | 60.119 | 43.478 | 12.06 | 0.00 | 0.00 | 2.29 |
2868 | 9117 | 3.243877 | CAGACACAAGCGCTCATATACAC | 59.756 | 47.826 | 12.06 | 0.00 | 0.00 | 2.90 |
2869 | 9118 | 2.193447 | ACACAAGCGCTCATATACACG | 58.807 | 47.619 | 12.06 | 0.00 | 0.00 | 4.49 |
2874 | 9123 | 2.434688 | CGCTCATATACACGCGCAT | 58.565 | 52.632 | 5.73 | 0.00 | 39.11 | 4.73 |
2875 | 9124 | 1.613270 | CGCTCATATACACGCGCATA | 58.387 | 50.000 | 5.73 | 1.53 | 39.11 | 3.14 |
2876 | 9125 | 2.185262 | CGCTCATATACACGCGCATAT | 58.815 | 47.619 | 5.73 | 7.02 | 39.11 | 1.78 |
2878 | 9127 | 3.177838 | CGCTCATATACACGCGCATATAC | 59.822 | 47.826 | 5.73 | 0.29 | 39.11 | 1.47 |
2879 | 9128 | 4.352039 | GCTCATATACACGCGCATATACT | 58.648 | 43.478 | 5.73 | 0.00 | 0.00 | 2.12 |
2880 | 9129 | 4.438145 | GCTCATATACACGCGCATATACTC | 59.562 | 45.833 | 5.73 | 0.00 | 0.00 | 2.59 |
2881 | 9130 | 5.554822 | TCATATACACGCGCATATACTCA | 57.445 | 39.130 | 5.73 | 0.00 | 0.00 | 3.41 |
2882 | 9131 | 5.329493 | TCATATACACGCGCATATACTCAC | 58.671 | 41.667 | 5.73 | 0.00 | 0.00 | 3.51 |
2883 | 9132 | 2.410785 | TACACGCGCATATACTCACC | 57.589 | 50.000 | 5.73 | 0.00 | 0.00 | 4.02 |
2885 | 9134 | 1.269102 | ACACGCGCATATACTCACCTC | 60.269 | 52.381 | 5.73 | 0.00 | 0.00 | 3.85 |
2886 | 9135 | 1.001268 | CACGCGCATATACTCACCTCT | 60.001 | 52.381 | 5.73 | 0.00 | 0.00 | 3.69 |
2887 | 9136 | 2.225727 | CACGCGCATATACTCACCTCTA | 59.774 | 50.000 | 5.73 | 0.00 | 0.00 | 2.43 |
2888 | 9137 | 3.082548 | ACGCGCATATACTCACCTCTAT | 58.917 | 45.455 | 5.73 | 0.00 | 0.00 | 1.98 |
2889 | 9138 | 3.119814 | ACGCGCATATACTCACCTCTATG | 60.120 | 47.826 | 5.73 | 0.00 | 0.00 | 2.23 |
2890 | 9139 | 3.127030 | CGCGCATATACTCACCTCTATGA | 59.873 | 47.826 | 8.75 | 0.00 | 0.00 | 2.15 |
2891 | 9140 | 4.379499 | CGCGCATATACTCACCTCTATGAA | 60.379 | 45.833 | 8.75 | 0.00 | 0.00 | 2.57 |
2892 | 9141 | 4.859798 | GCGCATATACTCACCTCTATGAAC | 59.140 | 45.833 | 0.30 | 0.00 | 0.00 | 3.18 |
2893 | 9142 | 5.089411 | CGCATATACTCACCTCTATGAACG | 58.911 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
2896 | 9145 | 2.656560 | ACTCACCTCTATGAACGCAC | 57.343 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2897 | 9146 | 1.893137 | ACTCACCTCTATGAACGCACA | 59.107 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
2898 | 9147 | 2.263077 | CTCACCTCTATGAACGCACAC | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
2899 | 9148 | 1.616374 | TCACCTCTATGAACGCACACA | 59.384 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
2901 | 9150 | 0.992072 | CCTCTATGAACGCACACACG | 59.008 | 55.000 | 0.00 | 0.00 | 39.50 | 4.49 |
2902 | 9151 | 0.366871 | CTCTATGAACGCACACACGC | 59.633 | 55.000 | 0.00 | 0.00 | 36.19 | 5.34 |
2904 | 9153 | 0.179250 | CTATGAACGCACACACGCAC | 60.179 | 55.000 | 0.00 | 0.00 | 36.19 | 5.34 |
2906 | 9155 | 2.350760 | GAACGCACACACGCACAC | 60.351 | 61.111 | 0.00 | 0.00 | 36.19 | 3.82 |
2907 | 9156 | 3.783588 | GAACGCACACACGCACACC | 62.784 | 63.158 | 0.00 | 0.00 | 36.19 | 4.16 |
2911 | 9160 | 2.604174 | GCACACACGCACACCCTAC | 61.604 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
2912 | 9161 | 1.959226 | CACACACGCACACCCTACC | 60.959 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
2913 | 9162 | 2.358247 | CACACGCACACCCTACCC | 60.358 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
2915 | 9164 | 3.319198 | CACGCACACCCTACCCCT | 61.319 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2916 | 9165 | 1.985662 | CACGCACACCCTACCCCTA | 60.986 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
2917 | 9166 | 1.002533 | ACGCACACCCTACCCCTAT | 59.997 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
2920 | 9169 | 0.759346 | GCACACCCTACCCCTATGAG | 59.241 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2921 | 9170 | 0.759346 | CACACCCTACCCCTATGAGC | 59.241 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2923 | 9172 | 0.759346 | CACCCTACCCCTATGAGCAC | 59.241 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2924 | 9173 | 0.400093 | ACCCTACCCCTATGAGCACC | 60.400 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2925 | 9174 | 0.104934 | CCCTACCCCTATGAGCACCT | 60.105 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2926 | 9175 | 1.343069 | CCTACCCCTATGAGCACCTC | 58.657 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2927 | 9176 | 1.343069 | CTACCCCTATGAGCACCTCC | 58.657 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2928 | 9177 | 0.469331 | TACCCCTATGAGCACCTCCG | 60.469 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2929 | 9178 | 1.457643 | CCCCTATGAGCACCTCCGA | 60.458 | 63.158 | 0.00 | 0.00 | 0.00 | 4.55 |
2931 | 9180 | 0.830648 | CCCTATGAGCACCTCCGAAA | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2932 | 9181 | 1.202580 | CCCTATGAGCACCTCCGAAAG | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 2.62 |
2935 | 9184 | 1.270907 | ATGAGCACCTCCGAAAGACT | 58.729 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2936 | 9185 | 0.318441 | TGAGCACCTCCGAAAGACTG | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2938 | 9187 | 0.605589 | AGCACCTCCGAAAGACTGAG | 59.394 | 55.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2939 | 9188 | 1.016653 | GCACCTCCGAAAGACTGAGC | 61.017 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2940 | 9189 | 0.390472 | CACCTCCGAAAGACTGAGCC | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2941 | 9190 | 1.153745 | CCTCCGAAAGACTGAGCCG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
2942 | 9191 | 1.153745 | CTCCGAAAGACTGAGCCGG | 60.154 | 63.158 | 0.00 | 0.00 | 41.36 | 6.13 |
2943 | 9192 | 2.815647 | CCGAAAGACTGAGCCGGC | 60.816 | 66.667 | 21.89 | 21.89 | 33.47 | 6.13 |
2945 | 9194 | 2.383527 | CGAAAGACTGAGCCGGCAC | 61.384 | 63.158 | 31.54 | 24.60 | 0.00 | 5.01 |
2948 | 9197 | 0.674895 | AAAGACTGAGCCGGCACATC | 60.675 | 55.000 | 31.54 | 24.45 | 0.00 | 3.06 |
2949 | 9198 | 1.830587 | AAGACTGAGCCGGCACATCA | 61.831 | 55.000 | 31.54 | 22.44 | 0.00 | 3.07 |
2951 | 9200 | 1.153289 | ACTGAGCCGGCACATCATC | 60.153 | 57.895 | 31.54 | 16.99 | 0.00 | 2.92 |
2953 | 9202 | 0.463295 | CTGAGCCGGCACATCATCTT | 60.463 | 55.000 | 31.54 | 3.33 | 0.00 | 2.40 |
2955 | 9204 | 0.462581 | GAGCCGGCACATCATCTTGA | 60.463 | 55.000 | 31.54 | 0.00 | 0.00 | 3.02 |
2965 | 10019 | 5.294306 | GGCACATCATCTTGAGATTTACGAA | 59.706 | 40.000 | 0.00 | 0.00 | 31.21 | 3.85 |
2971 | 10025 | 6.100004 | TCATCTTGAGATTTACGAAGTCACC | 58.900 | 40.000 | 0.00 | 0.00 | 35.39 | 4.02 |
2972 | 10026 | 4.482386 | TCTTGAGATTTACGAAGTCACCG | 58.518 | 43.478 | 0.00 | 0.00 | 43.93 | 4.94 |
2974 | 10028 | 5.181811 | TCTTGAGATTTACGAAGTCACCGTA | 59.818 | 40.000 | 0.00 | 0.00 | 43.93 | 4.02 |
2975 | 10029 | 4.978186 | TGAGATTTACGAAGTCACCGTAG | 58.022 | 43.478 | 0.00 | 0.00 | 43.93 | 3.51 |
2987 | 10041 | 3.437795 | CCGTAGGCACCTCGTCGT | 61.438 | 66.667 | 0.00 | 0.00 | 46.14 | 4.34 |
2988 | 10042 | 2.099831 | CGTAGGCACCTCGTCGTC | 59.900 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
2989 | 10043 | 2.099831 | GTAGGCACCTCGTCGTCG | 59.900 | 66.667 | 0.00 | 0.00 | 38.55 | 5.12 |
2990 | 10044 | 2.046988 | TAGGCACCTCGTCGTCGA | 60.047 | 61.111 | 4.42 | 4.42 | 44.12 | 4.20 |
2991 | 10045 | 2.393768 | TAGGCACCTCGTCGTCGAC | 61.394 | 63.158 | 15.51 | 15.51 | 41.35 | 4.20 |
3011 | 10065 | 3.516578 | GGAACGTCTTCTCCCACTG | 57.483 | 57.895 | 0.00 | 0.00 | 0.00 | 3.66 |
3012 | 10066 | 0.966920 | GGAACGTCTTCTCCCACTGA | 59.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3013 | 10067 | 1.343465 | GGAACGTCTTCTCCCACTGAA | 59.657 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
3014 | 10068 | 2.224209 | GGAACGTCTTCTCCCACTGAAA | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3015 | 10069 | 2.821991 | ACGTCTTCTCCCACTGAAAG | 57.178 | 50.000 | 0.00 | 0.00 | 42.29 | 2.62 |
3016 | 10070 | 1.270358 | ACGTCTTCTCCCACTGAAAGC | 60.270 | 52.381 | 0.00 | 0.00 | 37.60 | 3.51 |
3017 | 10071 | 1.270305 | CGTCTTCTCCCACTGAAAGCA | 60.270 | 52.381 | 0.00 | 0.00 | 37.60 | 3.91 |
3018 | 10072 | 2.147150 | GTCTTCTCCCACTGAAAGCAC | 58.853 | 52.381 | 0.00 | 0.00 | 37.60 | 4.40 |
3019 | 10073 | 1.768275 | TCTTCTCCCACTGAAAGCACA | 59.232 | 47.619 | 0.00 | 0.00 | 37.60 | 4.57 |
3020 | 10074 | 2.373169 | TCTTCTCCCACTGAAAGCACAT | 59.627 | 45.455 | 0.00 | 0.00 | 37.60 | 3.21 |
3021 | 10075 | 2.479566 | TCTCCCACTGAAAGCACATC | 57.520 | 50.000 | 0.00 | 0.00 | 37.60 | 3.06 |
3022 | 10076 | 1.081892 | CTCCCACTGAAAGCACATCG | 58.918 | 55.000 | 0.00 | 0.00 | 37.60 | 3.84 |
3023 | 10077 | 0.955428 | TCCCACTGAAAGCACATCGC | 60.955 | 55.000 | 0.00 | 0.00 | 37.60 | 4.58 |
3024 | 10078 | 1.503542 | CCACTGAAAGCACATCGCC | 59.496 | 57.895 | 0.00 | 0.00 | 44.04 | 5.54 |
3025 | 10079 | 1.133253 | CACTGAAAGCACATCGCCG | 59.867 | 57.895 | 0.00 | 0.00 | 44.04 | 6.46 |
3026 | 10080 | 2.034879 | ACTGAAAGCACATCGCCGG | 61.035 | 57.895 | 0.00 | 0.00 | 44.04 | 6.13 |
3027 | 10081 | 1.741401 | CTGAAAGCACATCGCCGGA | 60.741 | 57.895 | 5.05 | 0.00 | 44.04 | 5.14 |
3028 | 10082 | 1.298157 | CTGAAAGCACATCGCCGGAA | 61.298 | 55.000 | 5.05 | 0.00 | 44.04 | 4.30 |
3029 | 10083 | 0.886938 | TGAAAGCACATCGCCGGAAA | 60.887 | 50.000 | 5.05 | 0.00 | 44.04 | 3.13 |
3030 | 10084 | 0.451783 | GAAAGCACATCGCCGGAAAT | 59.548 | 50.000 | 5.05 | 0.00 | 44.04 | 2.17 |
3031 | 10085 | 0.451783 | AAAGCACATCGCCGGAAATC | 59.548 | 50.000 | 5.05 | 0.00 | 44.04 | 2.17 |
3032 | 10086 | 1.376609 | AAGCACATCGCCGGAAATCC | 61.377 | 55.000 | 5.05 | 0.00 | 44.04 | 3.01 |
3033 | 10087 | 1.819632 | GCACATCGCCGGAAATCCT | 60.820 | 57.895 | 5.05 | 0.00 | 32.94 | 3.24 |
3034 | 10088 | 2.016961 | CACATCGCCGGAAATCCTG | 58.983 | 57.895 | 5.05 | 0.00 | 0.00 | 3.86 |
3035 | 10089 | 0.461870 | CACATCGCCGGAAATCCTGA | 60.462 | 55.000 | 5.05 | 0.00 | 0.00 | 3.86 |
3036 | 10090 | 0.251916 | ACATCGCCGGAAATCCTGAA | 59.748 | 50.000 | 5.05 | 0.00 | 0.00 | 3.02 |
3037 | 10091 | 1.339631 | ACATCGCCGGAAATCCTGAAA | 60.340 | 47.619 | 5.05 | 0.00 | 0.00 | 2.69 |
3038 | 10092 | 1.949525 | CATCGCCGGAAATCCTGAAAT | 59.050 | 47.619 | 5.05 | 0.00 | 0.00 | 2.17 |
3039 | 10093 | 2.992124 | TCGCCGGAAATCCTGAAATA | 57.008 | 45.000 | 5.05 | 0.00 | 0.00 | 1.40 |
3040 | 10094 | 3.269538 | TCGCCGGAAATCCTGAAATAA | 57.730 | 42.857 | 5.05 | 0.00 | 0.00 | 1.40 |
3041 | 10095 | 3.611970 | TCGCCGGAAATCCTGAAATAAA | 58.388 | 40.909 | 5.05 | 0.00 | 0.00 | 1.40 |
3042 | 10096 | 4.204012 | TCGCCGGAAATCCTGAAATAAAT | 58.796 | 39.130 | 5.05 | 0.00 | 0.00 | 1.40 |
3043 | 10097 | 4.274950 | TCGCCGGAAATCCTGAAATAAATC | 59.725 | 41.667 | 5.05 | 0.00 | 0.00 | 2.17 |
3044 | 10098 | 4.556699 | CGCCGGAAATCCTGAAATAAATCC | 60.557 | 45.833 | 5.05 | 0.00 | 0.00 | 3.01 |
3045 | 10099 | 4.340950 | GCCGGAAATCCTGAAATAAATCCA | 59.659 | 41.667 | 5.05 | 0.00 | 0.00 | 3.41 |
3046 | 10100 | 5.507985 | GCCGGAAATCCTGAAATAAATCCAG | 60.508 | 44.000 | 5.05 | 0.00 | 0.00 | 3.86 |
3047 | 10101 | 5.010012 | CCGGAAATCCTGAAATAAATCCAGG | 59.990 | 44.000 | 0.00 | 0.00 | 46.64 | 4.45 |
3059 | 10113 | 8.999431 | TGAAATAAATCCAGGAATAATACGAGC | 58.001 | 33.333 | 0.00 | 0.00 | 0.00 | 5.03 |
3060 | 10114 | 8.918202 | AAATAAATCCAGGAATAATACGAGCA | 57.082 | 30.769 | 0.00 | 0.00 | 0.00 | 4.26 |
3061 | 10115 | 7.907214 | ATAAATCCAGGAATAATACGAGCAC | 57.093 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
3062 | 10116 | 3.746045 | TCCAGGAATAATACGAGCACC | 57.254 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
3063 | 10117 | 3.035363 | TCCAGGAATAATACGAGCACCA | 58.965 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
3064 | 10118 | 3.069586 | TCCAGGAATAATACGAGCACCAG | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
3065 | 10119 | 3.393800 | CAGGAATAATACGAGCACCAGG | 58.606 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3066 | 10120 | 3.069586 | CAGGAATAATACGAGCACCAGGA | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
3067 | 10121 | 3.904339 | AGGAATAATACGAGCACCAGGAT | 59.096 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
3068 | 10122 | 4.348168 | AGGAATAATACGAGCACCAGGATT | 59.652 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
3069 | 10123 | 5.063880 | GGAATAATACGAGCACCAGGATTT | 58.936 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
3070 | 10124 | 5.049405 | GGAATAATACGAGCACCAGGATTTG | 60.049 | 44.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3071 | 10125 | 3.627395 | AATACGAGCACCAGGATTTGA | 57.373 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
3072 | 10126 | 3.627395 | ATACGAGCACCAGGATTTGAA | 57.373 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
3073 | 10127 | 1.523758 | ACGAGCACCAGGATTTGAAC | 58.476 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3074 | 10128 | 0.804989 | CGAGCACCAGGATTTGAACC | 59.195 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
3075 | 10129 | 1.177401 | GAGCACCAGGATTTGAACCC | 58.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
3076 | 10130 | 0.779997 | AGCACCAGGATTTGAACCCT | 59.220 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
3081 | 10135 | 1.549203 | CAGGATTTGAACCCTGGTGG | 58.451 | 55.000 | 0.00 | 0.00 | 44.68 | 4.61 |
3082 | 10136 | 1.075374 | CAGGATTTGAACCCTGGTGGA | 59.925 | 52.381 | 0.00 | 0.00 | 44.68 | 4.02 |
3083 | 10137 | 2.003072 | AGGATTTGAACCCTGGTGGAT | 58.997 | 47.619 | 0.00 | 0.00 | 38.00 | 3.41 |
3084 | 10138 | 2.383338 | AGGATTTGAACCCTGGTGGATT | 59.617 | 45.455 | 0.00 | 0.00 | 38.00 | 3.01 |
3085 | 10139 | 2.760650 | GGATTTGAACCCTGGTGGATTC | 59.239 | 50.000 | 0.00 | 0.00 | 38.00 | 2.52 |
3086 | 10140 | 1.904287 | TTTGAACCCTGGTGGATTCG | 58.096 | 50.000 | 0.00 | 0.00 | 38.00 | 3.34 |
3087 | 10141 | 0.037590 | TTGAACCCTGGTGGATTCGG | 59.962 | 55.000 | 0.00 | 0.00 | 38.00 | 4.30 |
3088 | 10142 | 0.838554 | TGAACCCTGGTGGATTCGGA | 60.839 | 55.000 | 0.00 | 0.00 | 38.00 | 4.55 |
3089 | 10143 | 0.326927 | GAACCCTGGTGGATTCGGAA | 59.673 | 55.000 | 0.00 | 0.00 | 38.00 | 4.30 |
3090 | 10144 | 0.999712 | AACCCTGGTGGATTCGGAAT | 59.000 | 50.000 | 2.19 | 2.19 | 38.00 | 3.01 |
3091 | 10145 | 1.887797 | ACCCTGGTGGATTCGGAATA | 58.112 | 50.000 | 2.65 | 0.00 | 38.00 | 1.75 |
3092 | 10146 | 2.418669 | ACCCTGGTGGATTCGGAATAT | 58.581 | 47.619 | 2.65 | 0.00 | 38.00 | 1.28 |
3093 | 10147 | 2.372172 | ACCCTGGTGGATTCGGAATATC | 59.628 | 50.000 | 2.65 | 0.30 | 38.00 | 1.63 |
3094 | 10148 | 2.371841 | CCCTGGTGGATTCGGAATATCA | 59.628 | 50.000 | 2.65 | 2.95 | 35.39 | 2.15 |
3095 | 10149 | 3.403038 | CCTGGTGGATTCGGAATATCAC | 58.597 | 50.000 | 19.76 | 19.76 | 34.57 | 3.06 |
3096 | 10150 | 3.071602 | CCTGGTGGATTCGGAATATCACT | 59.928 | 47.826 | 23.63 | 0.00 | 34.57 | 3.41 |
3097 | 10151 | 4.060900 | CTGGTGGATTCGGAATATCACTG | 58.939 | 47.826 | 23.63 | 17.19 | 0.00 | 3.66 |
3098 | 10152 | 3.454447 | TGGTGGATTCGGAATATCACTGT | 59.546 | 43.478 | 23.63 | 0.00 | 0.00 | 3.55 |
3099 | 10153 | 4.058817 | GGTGGATTCGGAATATCACTGTC | 58.941 | 47.826 | 23.63 | 12.23 | 0.00 | 3.51 |
3100 | 10154 | 4.058817 | GTGGATTCGGAATATCACTGTCC | 58.941 | 47.826 | 20.26 | 10.82 | 0.00 | 4.02 |
3101 | 10155 | 3.709141 | TGGATTCGGAATATCACTGTCCA | 59.291 | 43.478 | 2.65 | 2.40 | 0.00 | 4.02 |
3102 | 10156 | 4.058817 | GGATTCGGAATATCACTGTCCAC | 58.941 | 47.826 | 2.65 | 0.00 | 0.00 | 4.02 |
3103 | 10157 | 3.536956 | TTCGGAATATCACTGTCCACC | 57.463 | 47.619 | 0.00 | 0.00 | 0.00 | 4.61 |
3104 | 10158 | 2.747177 | TCGGAATATCACTGTCCACCT | 58.253 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
3105 | 10159 | 3.905968 | TCGGAATATCACTGTCCACCTA | 58.094 | 45.455 | 0.00 | 0.00 | 0.00 | 3.08 |
3106 | 10160 | 4.283337 | TCGGAATATCACTGTCCACCTAA | 58.717 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
3107 | 10161 | 4.098960 | TCGGAATATCACTGTCCACCTAAC | 59.901 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
3108 | 10162 | 4.704965 | GGAATATCACTGTCCACCTAACC | 58.295 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
3109 | 10163 | 4.163458 | GGAATATCACTGTCCACCTAACCA | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
3110 | 10164 | 5.163195 | GGAATATCACTGTCCACCTAACCAT | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 3.55 |
3111 | 10165 | 3.914426 | ATCACTGTCCACCTAACCATC | 57.086 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
3112 | 10166 | 2.902608 | TCACTGTCCACCTAACCATCT | 58.097 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
3113 | 10167 | 2.832129 | TCACTGTCCACCTAACCATCTC | 59.168 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
3114 | 10168 | 2.567169 | CACTGTCCACCTAACCATCTCA | 59.433 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3115 | 10169 | 3.007940 | CACTGTCCACCTAACCATCTCAA | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
3116 | 10170 | 3.008049 | ACTGTCCACCTAACCATCTCAAC | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
3117 | 10171 | 2.304761 | TGTCCACCTAACCATCTCAACC | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3118 | 10172 | 2.304761 | GTCCACCTAACCATCTCAACCA | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3119 | 10173 | 2.304761 | TCCACCTAACCATCTCAACCAC | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3120 | 10174 | 2.039746 | CCACCTAACCATCTCAACCACA | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3121 | 10175 | 3.338249 | CACCTAACCATCTCAACCACAG | 58.662 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3122 | 10176 | 2.305927 | ACCTAACCATCTCAACCACAGG | 59.694 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3123 | 10177 | 2.305927 | CCTAACCATCTCAACCACAGGT | 59.694 | 50.000 | 0.00 | 0.00 | 37.65 | 4.00 |
3135 | 10189 | 2.618442 | CCACAGGTTGGTTTGCAAAT | 57.382 | 45.000 | 16.21 | 0.00 | 41.10 | 2.32 |
3337 | 10391 | 3.792736 | GCGATGGCTACCACCCCA | 61.793 | 66.667 | 0.00 | 0.00 | 35.80 | 4.96 |
3499 | 10562 | 3.101643 | TCTCCAAGCTTACCTGCTCTA | 57.898 | 47.619 | 0.00 | 0.00 | 43.24 | 2.43 |
3637 | 10700 | 0.250295 | CTGGAAGAAAGGCACCGACA | 60.250 | 55.000 | 0.00 | 0.00 | 34.07 | 4.35 |
3649 | 10712 | 4.794439 | CCGACAGCGCCGACATCA | 62.794 | 66.667 | 2.29 | 0.00 | 35.83 | 3.07 |
3720 | 10795 | 0.537188 | TCAAGTCCGAGATCAAGGGC | 59.463 | 55.000 | 3.20 | 3.20 | 0.00 | 5.19 |
3732 | 10807 | 1.988293 | TCAAGGGCCAAATGAACGAA | 58.012 | 45.000 | 6.18 | 0.00 | 0.00 | 3.85 |
3733 | 10808 | 2.311463 | TCAAGGGCCAAATGAACGAAA | 58.689 | 42.857 | 6.18 | 0.00 | 0.00 | 3.46 |
3734 | 10809 | 2.695666 | TCAAGGGCCAAATGAACGAAAA | 59.304 | 40.909 | 6.18 | 0.00 | 0.00 | 2.29 |
3735 | 10810 | 2.799978 | CAAGGGCCAAATGAACGAAAAC | 59.200 | 45.455 | 6.18 | 0.00 | 0.00 | 2.43 |
3736 | 10811 | 2.316108 | AGGGCCAAATGAACGAAAACT | 58.684 | 42.857 | 6.18 | 0.00 | 0.00 | 2.66 |
3737 | 10812 | 2.296190 | AGGGCCAAATGAACGAAAACTC | 59.704 | 45.455 | 6.18 | 0.00 | 0.00 | 3.01 |
3738 | 10813 | 2.035321 | GGGCCAAATGAACGAAAACTCA | 59.965 | 45.455 | 4.39 | 0.00 | 0.00 | 3.41 |
3818 | 10893 | 2.630098 | TCCATAGCCTCTTCGATTCCAG | 59.370 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3918 | 10993 | 6.216750 | GATAAGTACATCGACATCAAAGGC | 57.783 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
4080 | 11155 | 2.239124 | GCCGTTCGTCCGAAACACA | 61.239 | 57.895 | 3.37 | 0.00 | 35.75 | 3.72 |
4396 | 11479 | 2.811514 | GGCGATGGAGCATCAGGGA | 61.812 | 63.158 | 0.00 | 0.00 | 40.54 | 4.20 |
4494 | 11577 | 4.308526 | AGAGTTCTTGAAGGGGAAATCC | 57.691 | 45.455 | 0.00 | 0.00 | 37.29 | 3.01 |
4827 | 11968 | 5.221541 | GCAAGCTTCTGGTATACTCCTACAT | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4836 | 11977 | 9.877222 | TCTGGTATACTCCTACATTCTTATTCA | 57.123 | 33.333 | 2.25 | 0.00 | 0.00 | 2.57 |
4918 | 12060 | 7.261325 | AGTGATAGTACTACTTGACAATGCTG | 58.739 | 38.462 | 4.31 | 0.00 | 0.00 | 4.41 |
5019 | 12264 | 8.557029 | AGTAAAGTTGTACTAAAGTTGCATCAC | 58.443 | 33.333 | 0.00 | 0.00 | 32.42 | 3.06 |
5031 | 12276 | 9.643693 | CTAAAGTTGCATCACTTAATTTGGATT | 57.356 | 29.630 | 4.25 | 0.00 | 35.87 | 3.01 |
5117 | 12382 | 2.098117 | GCACAATGGTTCTATCAGTGCC | 59.902 | 50.000 | 0.00 | 0.00 | 43.54 | 5.01 |
5125 | 12590 | 4.054780 | GTTCTATCAGTGCCGAACCATA | 57.945 | 45.455 | 7.41 | 0.00 | 31.89 | 2.74 |
5288 | 15539 | 2.106166 | CAAGGATTGCCTCTATGGAGCT | 59.894 | 50.000 | 0.00 | 0.00 | 46.28 | 4.09 |
5739 | 16037 | 4.459337 | GGCATAACAGCTACTTCCAAACTT | 59.541 | 41.667 | 0.00 | 0.00 | 34.17 | 2.66 |
5835 | 16133 | 7.055667 | TCAGGAGAGGTACACATTTGATATC | 57.944 | 40.000 | 0.00 | 0.00 | 0.00 | 1.63 |
5882 | 16193 | 7.142021 | TCAGATGACGAAGATAACTGAATAGC | 58.858 | 38.462 | 0.00 | 0.00 | 31.51 | 2.97 |
5970 | 16314 | 3.106986 | ATTGGCCATCCCCGACGAG | 62.107 | 63.158 | 6.09 | 0.00 | 0.00 | 4.18 |
5984 | 16328 | 2.288457 | CCGACGAGGATAACTGCATCAT | 60.288 | 50.000 | 0.00 | 0.00 | 45.00 | 2.45 |
6084 | 16428 | 1.634702 | GCGTCATCACAAGGAGAGTC | 58.365 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6140 | 16484 | 5.505181 | ACCCATGTAAGTTCATTCAGACT | 57.495 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
6156 | 16657 | 6.854496 | TTCAGACTACACACCAACAATAAC | 57.146 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
6200 | 16702 | 6.296026 | ACTACACACCAACAATATGTTCTGT | 58.704 | 36.000 | 0.00 | 0.00 | 38.77 | 3.41 |
6390 | 17005 | 1.364901 | GTCGGGTTCAAGTCGGACA | 59.635 | 57.895 | 11.27 | 0.00 | 34.65 | 4.02 |
6403 | 17018 | 4.664677 | GGACAGCACGCTCACGGT | 62.665 | 66.667 | 0.00 | 0.00 | 46.04 | 4.83 |
6685 | 17300 | 2.049185 | ACAGCGTCGAGAGCCTCAT | 61.049 | 57.895 | 8.96 | 0.00 | 34.64 | 2.90 |
6783 | 17398 | 2.037367 | AGTACCAGAGCAGGGCGA | 59.963 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
7431 | 18227 | 3.766691 | TAAGCTCACCGCCGACCC | 61.767 | 66.667 | 0.00 | 0.00 | 40.39 | 4.46 |
7451 | 18247 | 2.501128 | GCAGCCACCTGATCGCTA | 59.499 | 61.111 | 0.00 | 0.00 | 41.77 | 4.26 |
7598 | 18403 | 2.347114 | CACGATGGCACCTGGACA | 59.653 | 61.111 | 0.00 | 0.00 | 40.35 | 4.02 |
7619 | 18424 | 2.011122 | ATAAGATCCCGACGGTGGAT | 57.989 | 50.000 | 13.94 | 9.27 | 45.32 | 3.41 |
7652 | 18457 | 2.930887 | GCAGTTCAACGTGGAGCTCATA | 60.931 | 50.000 | 17.19 | 0.19 | 0.00 | 2.15 |
7850 | 18655 | 3.325753 | AAGGAGCTCTGCGGCCTT | 61.326 | 61.111 | 14.64 | 4.89 | 41.00 | 4.35 |
7886 | 18691 | 1.309347 | CCTCCAGAGCCTCTCCTCA | 59.691 | 63.158 | 0.00 | 0.00 | 34.26 | 3.86 |
7940 | 18748 | 4.259890 | CGCTGAGTACGTTGTGTGTAAAAA | 60.260 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
7943 | 18751 | 6.673796 | GCTGAGTACGTTGTGTGTAAAAAGTT | 60.674 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
8001 | 18811 | 8.283291 | AGTTTTGCTAAGTTTCAGTCGATTAAG | 58.717 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
8003 | 18813 | 8.547967 | TTTGCTAAGTTTCAGTCGATTAAGAT | 57.452 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
8006 | 18816 | 8.656849 | TGCTAAGTTTCAGTCGATTAAGATTTC | 58.343 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
8019 | 18829 | 8.403236 | TCGATTAAGATTTCGTTATGTCTCAGA | 58.597 | 33.333 | 0.00 | 0.00 | 36.74 | 3.27 |
8133 | 20057 | 8.988064 | TTAATTCTATGTCACTTGACTGAGAC | 57.012 | 34.615 | 10.63 | 0.00 | 44.99 | 3.36 |
8134 | 20058 | 6.849085 | ATTCTATGTCACTTGACTGAGACT | 57.151 | 37.500 | 10.63 | 4.99 | 44.99 | 3.24 |
8135 | 20059 | 6.656632 | TTCTATGTCACTTGACTGAGACTT | 57.343 | 37.500 | 10.63 | 0.00 | 44.99 | 3.01 |
8136 | 20060 | 6.018589 | TCTATGTCACTTGACTGAGACTTG | 57.981 | 41.667 | 10.63 | 0.00 | 44.99 | 3.16 |
8137 | 20061 | 4.944619 | ATGTCACTTGACTGAGACTTGA | 57.055 | 40.909 | 10.63 | 0.00 | 44.99 | 3.02 |
8138 | 20062 | 4.944619 | TGTCACTTGACTGAGACTTGAT | 57.055 | 40.909 | 10.63 | 0.00 | 44.99 | 2.57 |
8155 | 20079 | 5.945155 | ACTTGATTAAGTCTCAGTCGACTC | 58.055 | 41.667 | 16.96 | 4.27 | 43.53 | 3.36 |
8200 | 20125 | 6.388619 | AAAATGTTAGACCTACAGACCCAT | 57.611 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
8238 | 20165 | 3.130633 | CGGCTGTGCTATTGTGCTAATA | 58.869 | 45.455 | 0.00 | 0.00 | 0.00 | 0.98 |
8286 | 20215 | 4.255510 | ACAATAATGACCTGGGCATCTT | 57.744 | 40.909 | 17.03 | 9.90 | 0.00 | 2.40 |
8305 | 20234 | 5.223449 | TCTTCAACACGGACTCCTAAAAT | 57.777 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
8319 | 20248 | 6.106673 | ACTCCTAAAATGAACACTGTATCCG | 58.893 | 40.000 | 0.00 | 0.00 | 0.00 | 4.18 |
8325 | 20254 | 1.274167 | TGAACACTGTATCCGTCCACC | 59.726 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
8346 | 20275 | 3.535561 | CAAAAGTGATATGAGAGCCGGT | 58.464 | 45.455 | 1.90 | 0.00 | 0.00 | 5.28 |
8351 | 20280 | 4.348486 | AGTGATATGAGAGCCGGTCATAT | 58.652 | 43.478 | 20.37 | 20.37 | 46.01 | 1.78 |
8352 | 20281 | 4.774726 | AGTGATATGAGAGCCGGTCATATT | 59.225 | 41.667 | 20.91 | 8.27 | 44.25 | 1.28 |
8366 | 20295 | 4.932799 | CGGTCATATTGTGTACCTCAAACA | 59.067 | 41.667 | 5.03 | 0.00 | 0.00 | 2.83 |
8368 | 20297 | 6.093495 | CGGTCATATTGTGTACCTCAAACATT | 59.907 | 38.462 | 5.03 | 0.00 | 0.00 | 2.71 |
8371 | 20300 | 6.876789 | TCATATTGTGTACCTCAAACATTCGT | 59.123 | 34.615 | 5.03 | 0.00 | 0.00 | 3.85 |
8382 | 20311 | 6.318648 | ACCTCAAACATTCGTATACATTGCAT | 59.681 | 34.615 | 3.32 | 0.00 | 0.00 | 3.96 |
8401 | 20330 | 8.723311 | CATTGCATATCAAATTTGAACAAACCT | 58.277 | 29.630 | 23.91 | 8.96 | 41.13 | 3.50 |
8479 | 20754 | 6.326375 | TCAACTAAACAAAAACAAGCGACAT | 58.674 | 32.000 | 0.00 | 0.00 | 0.00 | 3.06 |
8517 | 20794 | 0.035725 | CTTCATCAGCTGTGGAGGCA | 60.036 | 55.000 | 14.67 | 0.00 | 0.00 | 4.75 |
8531 | 20808 | 0.166814 | GAGGCATCTGTGTTTCACGC | 59.833 | 55.000 | 0.00 | 0.00 | 37.14 | 5.34 |
8534 | 20811 | 1.514678 | GCATCTGTGTTTCACGCCCA | 61.515 | 55.000 | 0.00 | 0.00 | 37.14 | 5.36 |
8566 | 20843 | 2.101750 | TGTCCGACAAGCTCAACAACTA | 59.898 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
8608 | 20885 | 2.635427 | GGCGGGAGAGGAAGAATAGAAT | 59.365 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
8639 | 20916 | 1.301637 | CCACATGCGACACCAGACA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
8651 | 20928 | 3.070076 | CCAGACATGGTCACATCCG | 57.930 | 57.895 | 0.00 | 0.00 | 42.17 | 4.18 |
8652 | 20929 | 1.091771 | CCAGACATGGTCACATCCGC | 61.092 | 60.000 | 0.00 | 0.00 | 42.17 | 5.54 |
8653 | 20930 | 0.391528 | CAGACATGGTCACATCCGCA | 60.392 | 55.000 | 0.00 | 0.00 | 34.35 | 5.69 |
8657 | 20934 | 1.149174 | ATGGTCACATCCGCATCCC | 59.851 | 57.895 | 0.00 | 0.00 | 29.20 | 3.85 |
8743 | 21020 | 3.207669 | GCTGCTCTTCCGCCATGG | 61.208 | 66.667 | 7.63 | 7.63 | 40.09 | 3.66 |
8759 | 21036 | 3.276846 | GGCGGTGTTGAAGTGCGT | 61.277 | 61.111 | 0.00 | 0.00 | 0.00 | 5.24 |
8791 | 21068 | 3.574780 | ACGTCAGCTCGTCATCGA | 58.425 | 55.556 | 0.00 | 0.00 | 44.12 | 3.59 |
8793 | 21070 | 0.179187 | ACGTCAGCTCGTCATCGAAG | 60.179 | 55.000 | 0.00 | 0.00 | 45.61 | 3.79 |
8844 | 21129 | 2.176364 | AGTAGTACTCATAGGCCCGGAA | 59.824 | 50.000 | 0.73 | 0.00 | 0.00 | 4.30 |
8851 | 21136 | 2.105821 | CTCATAGGCCCGGAAACCATTA | 59.894 | 50.000 | 0.73 | 0.00 | 0.00 | 1.90 |
8852 | 21137 | 2.510382 | TCATAGGCCCGGAAACCATTAA | 59.490 | 45.455 | 0.73 | 0.00 | 0.00 | 1.40 |
8893 | 21178 | 1.065928 | GCTCATCCGGAATCGACGT | 59.934 | 57.895 | 9.01 | 0.00 | 39.00 | 4.34 |
8905 | 21190 | 3.744426 | GGAATCGACGTCAGAAAAAGGAA | 59.256 | 43.478 | 17.16 | 0.00 | 0.00 | 3.36 |
8913 | 21198 | 7.171848 | TCGACGTCAGAAAAAGGAATCAAATAA | 59.828 | 33.333 | 17.16 | 0.00 | 0.00 | 1.40 |
8917 | 21202 | 7.059488 | CGTCAGAAAAAGGAATCAAATAACACG | 59.941 | 37.037 | 0.00 | 0.00 | 0.00 | 4.49 |
8918 | 21203 | 8.073768 | GTCAGAAAAAGGAATCAAATAACACGA | 58.926 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
8919 | 21204 | 8.792633 | TCAGAAAAAGGAATCAAATAACACGAT | 58.207 | 29.630 | 0.00 | 0.00 | 0.00 | 3.73 |
9010 | 21295 | 6.383726 | CCCCTTGATTGATCCCTTAAAATTGA | 59.616 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
5 | 6 | 4.752879 | TAGACGCGGCAAGCCACC | 62.753 | 66.667 | 17.71 | 0.27 | 44.76 | 4.61 |
6 | 7 | 3.188786 | CTAGACGCGGCAAGCCAC | 61.189 | 66.667 | 17.71 | 0.00 | 44.76 | 5.01 |
10 | 11 | 4.492160 | TCGGCTAGACGCGGCAAG | 62.492 | 66.667 | 17.71 | 7.16 | 40.44 | 4.01 |
11 | 12 | 4.789075 | GTCGGCTAGACGCGGCAA | 62.789 | 66.667 | 17.71 | 0.00 | 40.43 | 4.52 |
18 | 19 | 1.918609 | GTTCAATGACGTCGGCTAGAC | 59.081 | 52.381 | 11.62 | 1.74 | 46.16 | 2.59 |
19 | 20 | 1.135199 | GGTTCAATGACGTCGGCTAGA | 60.135 | 52.381 | 11.62 | 1.56 | 0.00 | 2.43 |
20 | 21 | 1.135083 | AGGTTCAATGACGTCGGCTAG | 60.135 | 52.381 | 11.62 | 0.00 | 0.00 | 3.42 |
21 | 22 | 0.892755 | AGGTTCAATGACGTCGGCTA | 59.107 | 50.000 | 11.62 | 0.00 | 0.00 | 3.93 |
22 | 23 | 0.389948 | GAGGTTCAATGACGTCGGCT | 60.390 | 55.000 | 11.62 | 0.00 | 0.00 | 5.52 |
23 | 24 | 1.359459 | GGAGGTTCAATGACGTCGGC | 61.359 | 60.000 | 11.62 | 0.00 | 35.77 | 5.54 |
24 | 25 | 0.739813 | GGGAGGTTCAATGACGTCGG | 60.740 | 60.000 | 11.62 | 3.11 | 35.77 | 4.79 |
25 | 26 | 0.739813 | GGGGAGGTTCAATGACGTCG | 60.740 | 60.000 | 11.62 | 0.00 | 35.77 | 5.12 |
26 | 27 | 0.613777 | AGGGGAGGTTCAATGACGTC | 59.386 | 55.000 | 9.11 | 9.11 | 34.55 | 4.34 |
27 | 28 | 1.003233 | GAAGGGGAGGTTCAATGACGT | 59.997 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
28 | 29 | 1.679032 | GGAAGGGGAGGTTCAATGACG | 60.679 | 57.143 | 0.00 | 0.00 | 0.00 | 4.35 |
29 | 30 | 1.636003 | AGGAAGGGGAGGTTCAATGAC | 59.364 | 52.381 | 0.00 | 0.00 | 0.00 | 3.06 |
30 | 31 | 1.916181 | GAGGAAGGGGAGGTTCAATGA | 59.084 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
31 | 32 | 1.064389 | GGAGGAAGGGGAGGTTCAATG | 60.064 | 57.143 | 0.00 | 0.00 | 0.00 | 2.82 |
32 | 33 | 1.299939 | GGAGGAAGGGGAGGTTCAAT | 58.700 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
33 | 34 | 0.845102 | GGGAGGAAGGGGAGGTTCAA | 60.845 | 60.000 | 0.00 | 0.00 | 0.00 | 2.69 |
74 | 75 | 2.096496 | CCGAAACTCTAGCAAAGCCATG | 59.904 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
112 | 113 | 2.520741 | CCGGTGGCCACAAAACCT | 60.521 | 61.111 | 35.78 | 0.00 | 0.00 | 3.50 |
123 | 124 | 2.573609 | CTTTACTCCCTCGCCGGTGG | 62.574 | 65.000 | 16.49 | 9.21 | 0.00 | 4.61 |
125 | 126 | 2.356780 | CCTTTACTCCCTCGCCGGT | 61.357 | 63.158 | 1.90 | 0.00 | 0.00 | 5.28 |
129 | 130 | 0.108281 | GTCCACCTTTACTCCCTCGC | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
137 | 138 | 3.335579 | GTCCACATCTGTCCACCTTTAC | 58.664 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
138 | 139 | 2.028476 | CGTCCACATCTGTCCACCTTTA | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
147 | 148 | 1.273606 | CCACTTCTCGTCCACATCTGT | 59.726 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
181 | 183 | 2.495366 | TTCTAATGGACGCGTGCGGT | 62.495 | 55.000 | 25.71 | 17.74 | 44.69 | 5.68 |
190 | 192 | 1.065709 | TGCCCGTCCTTTCTAATGGAC | 60.066 | 52.381 | 14.70 | 14.70 | 45.09 | 4.02 |
216 | 218 | 1.451504 | CTGGCAGTGTGTGGAAGGA | 59.548 | 57.895 | 6.28 | 0.00 | 0.00 | 3.36 |
255 | 257 | 3.123790 | CACATGCGGTCGTATTAAACACA | 59.876 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
271 | 273 | 2.491152 | CGGCCAATCACCACATGC | 59.509 | 61.111 | 2.24 | 0.00 | 0.00 | 4.06 |
280 | 282 | 1.675641 | ACAAGTCAGCCGGCCAATC | 60.676 | 57.895 | 26.15 | 11.70 | 0.00 | 2.67 |
281 | 283 | 1.973281 | CACAAGTCAGCCGGCCAAT | 60.973 | 57.895 | 26.15 | 6.44 | 0.00 | 3.16 |
306 | 308 | 1.847818 | CGTTTCCTCAGTGTTCGTCA | 58.152 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
308 | 310 | 1.213094 | CGCGTTTCCTCAGTGTTCGT | 61.213 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
311 | 313 | 2.594962 | CGCGCGTTTCCTCAGTGTT | 61.595 | 57.895 | 24.19 | 0.00 | 0.00 | 3.32 |
363 | 386 | 2.028484 | GCGTCCACTTCGTGTCCA | 59.972 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
388 | 411 | 2.338257 | CAACGCGCCAACCCAAAT | 59.662 | 55.556 | 5.73 | 0.00 | 0.00 | 2.32 |
412 | 435 | 1.134848 | GGGTTGCTGCAGACAAAAACA | 60.135 | 47.619 | 20.43 | 0.00 | 0.00 | 2.83 |
425 | 448 | 1.178276 | TCACGTTTGTTTGGGTTGCT | 58.822 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
428 | 451 | 2.265647 | CGTTCACGTTTGTTTGGGTT | 57.734 | 45.000 | 0.00 | 0.00 | 34.11 | 4.11 |
444 | 467 | 0.802494 | GACGATCCATTTGGCACGTT | 59.198 | 50.000 | 16.95 | 6.34 | 42.69 | 3.99 |
448 | 471 | 1.451207 | CCGGACGATCCATTTGGCA | 60.451 | 57.895 | 0.00 | 0.00 | 35.91 | 4.92 |
451 | 474 | 0.732571 | CCAACCGGACGATCCATTTG | 59.267 | 55.000 | 9.46 | 0.00 | 35.91 | 2.32 |
462 | 485 | 1.275291 | CTAAGAGCAACTCCAACCGGA | 59.725 | 52.381 | 9.46 | 0.00 | 39.79 | 5.14 |
491 | 514 | 4.736126 | AAAACTTTGAAGGGGTCAACAG | 57.264 | 40.909 | 0.00 | 0.00 | 46.09 | 3.16 |
493 | 516 | 5.339008 | AGAAAAACTTTGAAGGGGTCAAC | 57.661 | 39.130 | 0.00 | 0.00 | 46.09 | 3.18 |
498 | 521 | 5.989477 | AGGAAAAGAAAAACTTTGAAGGGG | 58.011 | 37.500 | 0.00 | 0.00 | 46.55 | 4.79 |
516 | 541 | 9.203163 | TGGTGGAGTATAAAAAGAAAAAGGAAA | 57.797 | 29.630 | 0.00 | 0.00 | 0.00 | 3.13 |
517 | 542 | 8.770010 | TGGTGGAGTATAAAAAGAAAAAGGAA | 57.230 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
518 | 543 | 8.770010 | TTGGTGGAGTATAAAAAGAAAAAGGA | 57.230 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
519 | 544 | 9.825109 | TTTTGGTGGAGTATAAAAAGAAAAAGG | 57.175 | 29.630 | 0.00 | 0.00 | 0.00 | 3.11 |
562 | 587 | 2.179427 | AGCAAAGGCAAATAAGACCCC | 58.821 | 47.619 | 0.00 | 0.00 | 44.61 | 4.95 |
563 | 588 | 4.017126 | ACTAGCAAAGGCAAATAAGACCC | 58.983 | 43.478 | 0.00 | 0.00 | 44.61 | 4.46 |
597 | 622 | 0.316937 | ATCAACGCGTGCACACAAAG | 60.317 | 50.000 | 14.98 | 3.40 | 0.00 | 2.77 |
711 | 738 | 6.980051 | ACCGTATCTTGACAAATAGGAAAC | 57.020 | 37.500 | 9.61 | 0.00 | 0.00 | 2.78 |
714 | 741 | 7.613585 | TGTTTACCGTATCTTGACAAATAGGA | 58.386 | 34.615 | 9.61 | 0.00 | 0.00 | 2.94 |
715 | 742 | 7.837202 | TGTTTACCGTATCTTGACAAATAGG | 57.163 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
717 | 744 | 9.491675 | TTCTTGTTTACCGTATCTTGACAAATA | 57.508 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
785 | 813 | 1.000171 | ACGGGAAAGGTCGTAACTGAC | 60.000 | 52.381 | 0.00 | 0.00 | 37.88 | 3.51 |
829 | 857 | 1.136305 | TCAGCCAATCGGTAGTACTGC | 59.864 | 52.381 | 5.39 | 3.50 | 33.28 | 4.40 |
920 | 961 | 2.038329 | TACACTCCCCCGGTCCAG | 59.962 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
922 | 963 | 2.284112 | TGTACACTCCCCCGGTCC | 60.284 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
924 | 965 | 2.993264 | CGTGTACACTCCCCCGGT | 60.993 | 66.667 | 23.01 | 0.00 | 0.00 | 5.28 |
925 | 966 | 4.446413 | GCGTGTACACTCCCCCGG | 62.446 | 72.222 | 23.01 | 7.37 | 0.00 | 5.73 |
930 | 971 | 3.170585 | GTCGCGCGTGTACACTCC | 61.171 | 66.667 | 30.98 | 12.91 | 0.00 | 3.85 |
1009 | 1055 | 2.615493 | GCAGGGAAGACAAGGATCGAAA | 60.615 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1010 | 1056 | 1.066143 | GCAGGGAAGACAAGGATCGAA | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
1011 | 1057 | 0.537188 | GCAGGGAAGACAAGGATCGA | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 3.59 |
1012 | 1058 | 0.807667 | CGCAGGGAAGACAAGGATCG | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1013 | 1059 | 1.092345 | GCGCAGGGAAGACAAGGATC | 61.092 | 60.000 | 0.30 | 0.00 | 0.00 | 3.36 |
1014 | 1060 | 1.078143 | GCGCAGGGAAGACAAGGAT | 60.078 | 57.895 | 0.30 | 0.00 | 0.00 | 3.24 |
1018 | 1064 | 4.617520 | TGCGCGCAGGGAAGACAA | 62.618 | 61.111 | 33.09 | 2.14 | 46.37 | 3.18 |
1047 | 1109 | 1.475403 | TCCTCCTGCTGCACTAGTAC | 58.525 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1175 | 1253 | 2.697761 | CGTCGTCGATGGGTCCACT | 61.698 | 63.158 | 6.56 | 0.00 | 39.71 | 4.00 |
1288 | 1375 | 5.461526 | AGCGAAAGAAGAATTAAACAAGGC | 58.538 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
1318 | 1449 | 1.493950 | GCTCGATCCATCCGCTTGTG | 61.494 | 60.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1388 | 1520 | 5.822278 | ACGTGCACATGTACACAAATAAAA | 58.178 | 33.333 | 25.12 | 0.00 | 36.57 | 1.52 |
1391 | 1523 | 4.627900 | CCTACGTGCACATGTACACAAATA | 59.372 | 41.667 | 25.12 | 14.47 | 36.57 | 1.40 |
1403 | 1663 | 0.676736 | TGTGATGTCCTACGTGCACA | 59.323 | 50.000 | 18.64 | 0.00 | 34.28 | 4.57 |
1422 | 1682 | 0.881118 | GAATCGGTGTGCATTGTGGT | 59.119 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1491 | 2104 | 4.657502 | GCGCTAGCTAGCTAACCC | 57.342 | 61.111 | 36.02 | 18.77 | 46.85 | 4.11 |
1539 | 2218 | 1.340399 | TGCGATGGAGGCTGGAATCT | 61.340 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1658 | 2384 | 2.185350 | CAAGGAGATCGCGGCAGT | 59.815 | 61.111 | 6.13 | 0.00 | 0.00 | 4.40 |
1685 | 2427 | 0.328926 | TGTGCATGGGATCAAGCAGA | 59.671 | 50.000 | 0.00 | 0.00 | 46.34 | 4.26 |
1707 | 2453 | 8.875803 | TGACTTATAGCTAAATTAACAACGTGG | 58.124 | 33.333 | 0.00 | 0.00 | 0.00 | 4.94 |
1715 | 2461 | 9.609346 | GGTGGAGTTGACTTATAGCTAAATTAA | 57.391 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1724 | 2470 | 3.446161 | TCCGTGGTGGAGTTGACTTATAG | 59.554 | 47.826 | 0.00 | 0.00 | 43.74 | 1.31 |
1774 | 3308 | 3.307975 | GAGGGTCCCTTTGGTAAACTACC | 60.308 | 52.174 | 13.13 | 0.00 | 41.07 | 3.18 |
1785 | 3319 | 1.886422 | GATCTCCAGAGGGTCCCTTT | 58.114 | 55.000 | 13.13 | 2.68 | 31.76 | 3.11 |
1808 | 3348 | 9.726438 | AATTATTCTATTTCGAGAAATCCGGAT | 57.274 | 29.630 | 12.38 | 12.38 | 40.99 | 4.18 |
1910 | 3450 | 7.119709 | TGGAAAGTCGGATTATCTTCATGTA | 57.880 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
1911 | 3451 | 5.989477 | TGGAAAGTCGGATTATCTTCATGT | 58.011 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
1912 | 3452 | 6.238484 | GGTTGGAAAGTCGGATTATCTTCATG | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 3.07 |
1913 | 3453 | 5.823045 | GGTTGGAAAGTCGGATTATCTTCAT | 59.177 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1914 | 3454 | 5.045869 | AGGTTGGAAAGTCGGATTATCTTCA | 60.046 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1915 | 3455 | 5.294552 | CAGGTTGGAAAGTCGGATTATCTTC | 59.705 | 44.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1916 | 3456 | 5.186198 | CAGGTTGGAAAGTCGGATTATCTT | 58.814 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
1919 | 3459 | 3.054361 | AGCAGGTTGGAAAGTCGGATTAT | 60.054 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
1923 | 3463 | 0.034896 | GAGCAGGTTGGAAAGTCGGA | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
1924 | 3464 | 0.035458 | AGAGCAGGTTGGAAAGTCGG | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1946 | 3519 | 4.314440 | TCTGTGCTGTCGGGGTGC | 62.314 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
1998 | 3638 | 3.181774 | CCTACATGAAGTTATACGCGTGC | 59.818 | 47.826 | 24.59 | 9.39 | 0.00 | 5.34 |
2058 | 3765 | 5.152097 | TCGAAGTAAACTTACAGCGAAGAG | 58.848 | 41.667 | 11.75 | 0.00 | 37.99 | 2.85 |
2189 | 4028 | 1.459592 | GTGTAGTGACAATGGCGTGTC | 59.540 | 52.381 | 12.75 | 12.75 | 46.74 | 3.67 |
2195 | 4034 | 1.359848 | GCCGAGTGTAGTGACAATGG | 58.640 | 55.000 | 0.00 | 0.00 | 37.31 | 3.16 |
2196 | 4035 | 1.066858 | AGGCCGAGTGTAGTGACAATG | 60.067 | 52.381 | 0.00 | 0.00 | 37.31 | 2.82 |
2275 | 4716 | 7.486870 | CGTTTTATATTTTGGTTCCAAGGTAGC | 59.513 | 37.037 | 4.44 | 0.00 | 0.00 | 3.58 |
2326 | 4767 | 8.780846 | TCCTCGTAGCAAAATAAGACATTTTA | 57.219 | 30.769 | 0.00 | 0.00 | 30.85 | 1.52 |
2332 | 4773 | 9.182933 | CTATTACTCCTCGTAGCAAAATAAGAC | 57.817 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
2343 | 4784 | 8.830201 | TTCTTAGCTACTATTACTCCTCGTAG | 57.170 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
2345 | 4786 | 8.404765 | GTTTTCTTAGCTACTATTACTCCTCGT | 58.595 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
2390 | 4860 | 4.754618 | TGAGTGACCGTAAAGAACTACGTA | 59.245 | 41.667 | 0.00 | 0.00 | 42.47 | 3.57 |
2391 | 4861 | 3.565482 | TGAGTGACCGTAAAGAACTACGT | 59.435 | 43.478 | 0.00 | 0.00 | 42.47 | 3.57 |
2392 | 4862 | 4.151258 | TGAGTGACCGTAAAGAACTACG | 57.849 | 45.455 | 0.00 | 0.00 | 43.40 | 3.51 |
2449 | 5089 | 0.389025 | CTGGCCACCAAACAGGAAAC | 59.611 | 55.000 | 0.00 | 0.00 | 41.22 | 2.78 |
2469 | 5110 | 1.747355 | GCAGTTGAACATGGATGGGAG | 59.253 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2647 | 6145 | 3.053917 | TCCCACTAATTACCTCCTTTGCC | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 4.52 |
2670 | 6168 | 1.577328 | CGAAGCACATGGTCCCACAC | 61.577 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2672 | 6170 | 3.578456 | CGAAGCACATGGTCCCAC | 58.422 | 61.111 | 0.00 | 0.00 | 0.00 | 4.61 |
2684 | 6182 | 1.583709 | GCAACGGCTATTGCGAAGC | 60.584 | 57.895 | 9.23 | 0.00 | 45.08 | 3.86 |
2685 | 6183 | 4.670606 | GCAACGGCTATTGCGAAG | 57.329 | 55.556 | 9.23 | 0.00 | 45.08 | 3.79 |
2726 | 8749 | 5.636837 | TCGGCCAAAATCGAAGATAAAAAG | 58.363 | 37.500 | 2.24 | 0.00 | 45.12 | 2.27 |
2739 | 8986 | 3.281727 | TCAGCTAGAATCGGCCAAAAT | 57.718 | 42.857 | 2.24 | 0.00 | 0.00 | 1.82 |
2831 | 9080 | 6.293407 | GCTTGTGTCTGTACTGATGCTAAAAA | 60.293 | 38.462 | 5.69 | 0.00 | 0.00 | 1.94 |
2832 | 9081 | 5.179368 | GCTTGTGTCTGTACTGATGCTAAAA | 59.821 | 40.000 | 5.69 | 0.00 | 0.00 | 1.52 |
2833 | 9082 | 4.690748 | GCTTGTGTCTGTACTGATGCTAAA | 59.309 | 41.667 | 5.69 | 0.00 | 0.00 | 1.85 |
2834 | 9083 | 4.245660 | GCTTGTGTCTGTACTGATGCTAA | 58.754 | 43.478 | 5.69 | 0.07 | 0.00 | 3.09 |
2836 | 9085 | 2.693069 | GCTTGTGTCTGTACTGATGCT | 58.307 | 47.619 | 5.69 | 0.00 | 0.00 | 3.79 |
2837 | 9086 | 1.391485 | CGCTTGTGTCTGTACTGATGC | 59.609 | 52.381 | 5.69 | 3.20 | 0.00 | 3.91 |
2838 | 9087 | 1.391485 | GCGCTTGTGTCTGTACTGATG | 59.609 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
2839 | 9088 | 1.273606 | AGCGCTTGTGTCTGTACTGAT | 59.726 | 47.619 | 2.64 | 0.00 | 0.00 | 2.90 |
2841 | 9090 | 1.063806 | GAGCGCTTGTGTCTGTACTG | 58.936 | 55.000 | 13.26 | 0.00 | 0.00 | 2.74 |
2842 | 9091 | 0.673985 | TGAGCGCTTGTGTCTGTACT | 59.326 | 50.000 | 13.26 | 0.00 | 0.00 | 2.73 |
2843 | 9092 | 1.714794 | ATGAGCGCTTGTGTCTGTAC | 58.285 | 50.000 | 13.26 | 0.00 | 0.00 | 2.90 |
2844 | 9093 | 3.801114 | ATATGAGCGCTTGTGTCTGTA | 57.199 | 42.857 | 13.26 | 0.00 | 0.00 | 2.74 |
2845 | 9094 | 2.680312 | ATATGAGCGCTTGTGTCTGT | 57.320 | 45.000 | 13.26 | 0.00 | 0.00 | 3.41 |
2847 | 9096 | 3.448686 | GTGTATATGAGCGCTTGTGTCT | 58.551 | 45.455 | 13.26 | 0.00 | 0.00 | 3.41 |
2848 | 9097 | 2.216488 | CGTGTATATGAGCGCTTGTGTC | 59.784 | 50.000 | 13.26 | 0.00 | 0.00 | 3.67 |
2849 | 9098 | 2.193447 | CGTGTATATGAGCGCTTGTGT | 58.807 | 47.619 | 13.26 | 4.27 | 0.00 | 3.72 |
2850 | 9099 | 1.071239 | GCGTGTATATGAGCGCTTGTG | 60.071 | 52.381 | 13.26 | 0.00 | 45.48 | 3.33 |
2851 | 9100 | 1.209128 | GCGTGTATATGAGCGCTTGT | 58.791 | 50.000 | 13.26 | 5.98 | 45.48 | 3.16 |
2852 | 9101 | 0.159554 | CGCGTGTATATGAGCGCTTG | 59.840 | 55.000 | 13.26 | 0.00 | 46.56 | 4.01 |
2857 | 9106 | 4.352039 | AGTATATGCGCGTGTATATGAGC | 58.648 | 43.478 | 24.28 | 15.73 | 38.85 | 4.26 |
2858 | 9107 | 5.452623 | GTGAGTATATGCGCGTGTATATGAG | 59.547 | 44.000 | 24.28 | 0.00 | 34.71 | 2.90 |
2860 | 9109 | 4.499399 | GGTGAGTATATGCGCGTGTATATG | 59.501 | 45.833 | 24.28 | 0.00 | 34.71 | 1.78 |
2861 | 9110 | 4.398358 | AGGTGAGTATATGCGCGTGTATAT | 59.602 | 41.667 | 20.79 | 20.79 | 37.23 | 0.86 |
2862 | 9111 | 3.754850 | AGGTGAGTATATGCGCGTGTATA | 59.245 | 43.478 | 13.61 | 9.23 | 0.00 | 1.47 |
2863 | 9112 | 2.557056 | AGGTGAGTATATGCGCGTGTAT | 59.443 | 45.455 | 13.61 | 9.22 | 0.00 | 2.29 |
2864 | 9113 | 1.951602 | AGGTGAGTATATGCGCGTGTA | 59.048 | 47.619 | 13.61 | 7.27 | 0.00 | 2.90 |
2865 | 9114 | 0.744874 | AGGTGAGTATATGCGCGTGT | 59.255 | 50.000 | 13.61 | 8.52 | 0.00 | 4.49 |
2866 | 9115 | 1.001268 | AGAGGTGAGTATATGCGCGTG | 60.001 | 52.381 | 13.61 | 0.00 | 0.00 | 5.34 |
2867 | 9116 | 1.319541 | AGAGGTGAGTATATGCGCGT | 58.680 | 50.000 | 8.43 | 7.55 | 0.00 | 6.01 |
2868 | 9117 | 3.127030 | TCATAGAGGTGAGTATATGCGCG | 59.873 | 47.826 | 0.00 | 0.00 | 0.00 | 6.86 |
2869 | 9118 | 4.703645 | TCATAGAGGTGAGTATATGCGC | 57.296 | 45.455 | 0.00 | 0.00 | 0.00 | 6.09 |
2870 | 9119 | 5.089411 | CGTTCATAGAGGTGAGTATATGCG | 58.911 | 45.833 | 0.00 | 0.00 | 0.00 | 4.73 |
2872 | 9121 | 5.859114 | GTGCGTTCATAGAGGTGAGTATATG | 59.141 | 44.000 | 0.00 | 0.00 | 0.00 | 1.78 |
2874 | 9123 | 4.885325 | TGTGCGTTCATAGAGGTGAGTATA | 59.115 | 41.667 | 0.00 | 0.00 | 0.00 | 1.47 |
2875 | 9124 | 3.699538 | TGTGCGTTCATAGAGGTGAGTAT | 59.300 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
2876 | 9125 | 3.086282 | TGTGCGTTCATAGAGGTGAGTA | 58.914 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
2878 | 9127 | 2.263077 | GTGTGCGTTCATAGAGGTGAG | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
2879 | 9128 | 1.616374 | TGTGTGCGTTCATAGAGGTGA | 59.384 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
2880 | 9129 | 1.726791 | GTGTGTGCGTTCATAGAGGTG | 59.273 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
2881 | 9130 | 1.668919 | CGTGTGTGCGTTCATAGAGGT | 60.669 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2882 | 9131 | 0.992072 | CGTGTGTGCGTTCATAGAGG | 59.008 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2883 | 9132 | 0.366871 | GCGTGTGTGCGTTCATAGAG | 59.633 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2885 | 9134 | 0.179250 | GTGCGTGTGTGCGTTCATAG | 60.179 | 55.000 | 0.00 | 0.00 | 37.81 | 2.23 |
2886 | 9135 | 0.876342 | TGTGCGTGTGTGCGTTCATA | 60.876 | 50.000 | 0.00 | 0.00 | 37.81 | 2.15 |
2887 | 9136 | 2.176926 | TGTGCGTGTGTGCGTTCAT | 61.177 | 52.632 | 0.00 | 0.00 | 37.81 | 2.57 |
2888 | 9137 | 2.815647 | TGTGCGTGTGTGCGTTCA | 60.816 | 55.556 | 0.00 | 0.00 | 37.81 | 3.18 |
2889 | 9138 | 2.350760 | GTGTGCGTGTGTGCGTTC | 60.351 | 61.111 | 0.00 | 0.00 | 37.81 | 3.95 |
2890 | 9139 | 3.871574 | GGTGTGCGTGTGTGCGTT | 61.872 | 61.111 | 0.00 | 0.00 | 37.81 | 4.84 |
2893 | 9142 | 2.280524 | TAGGGTGTGCGTGTGTGC | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 4.57 |
2896 | 9145 | 2.358247 | GGGTAGGGTGTGCGTGTG | 60.358 | 66.667 | 0.00 | 0.00 | 0.00 | 3.82 |
2897 | 9146 | 2.735151 | TAGGGGTAGGGTGTGCGTGT | 62.735 | 60.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2898 | 9147 | 1.335132 | ATAGGGGTAGGGTGTGCGTG | 61.335 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2899 | 9148 | 1.002533 | ATAGGGGTAGGGTGTGCGT | 59.997 | 57.895 | 0.00 | 0.00 | 0.00 | 5.24 |
2901 | 9150 | 0.759346 | CTCATAGGGGTAGGGTGTGC | 59.241 | 60.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2902 | 9151 | 0.759346 | GCTCATAGGGGTAGGGTGTG | 59.241 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2904 | 9153 | 0.759346 | GTGCTCATAGGGGTAGGGTG | 59.241 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2906 | 9155 | 0.104934 | AGGTGCTCATAGGGGTAGGG | 60.105 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2907 | 9156 | 1.343069 | GAGGTGCTCATAGGGGTAGG | 58.657 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2909 | 9158 | 0.469331 | CGGAGGTGCTCATAGGGGTA | 60.469 | 60.000 | 0.00 | 0.00 | 31.08 | 3.69 |
2911 | 9160 | 1.048724 | TTCGGAGGTGCTCATAGGGG | 61.049 | 60.000 | 0.00 | 0.00 | 31.08 | 4.79 |
2912 | 9161 | 0.830648 | TTTCGGAGGTGCTCATAGGG | 59.169 | 55.000 | 0.00 | 0.00 | 31.08 | 3.53 |
2913 | 9162 | 1.757118 | TCTTTCGGAGGTGCTCATAGG | 59.243 | 52.381 | 0.00 | 0.00 | 31.08 | 2.57 |
2915 | 9164 | 2.166459 | CAGTCTTTCGGAGGTGCTCATA | 59.834 | 50.000 | 0.00 | 0.00 | 31.08 | 2.15 |
2916 | 9165 | 1.066573 | CAGTCTTTCGGAGGTGCTCAT | 60.067 | 52.381 | 0.00 | 0.00 | 31.08 | 2.90 |
2917 | 9166 | 0.318441 | CAGTCTTTCGGAGGTGCTCA | 59.682 | 55.000 | 0.00 | 0.00 | 31.08 | 4.26 |
2920 | 9169 | 1.016653 | GCTCAGTCTTTCGGAGGTGC | 61.017 | 60.000 | 0.00 | 0.00 | 38.48 | 5.01 |
2921 | 9170 | 0.390472 | GGCTCAGTCTTTCGGAGGTG | 60.390 | 60.000 | 0.00 | 0.00 | 38.48 | 4.00 |
2923 | 9172 | 1.153745 | CGGCTCAGTCTTTCGGAGG | 60.154 | 63.158 | 0.00 | 0.00 | 38.48 | 4.30 |
2924 | 9173 | 1.153745 | CCGGCTCAGTCTTTCGGAG | 60.154 | 63.158 | 0.00 | 0.00 | 42.94 | 4.63 |
2925 | 9174 | 2.970639 | CCGGCTCAGTCTTTCGGA | 59.029 | 61.111 | 0.00 | 0.00 | 42.94 | 4.55 |
2926 | 9175 | 2.815647 | GCCGGCTCAGTCTTTCGG | 60.816 | 66.667 | 22.15 | 0.00 | 43.13 | 4.30 |
2927 | 9176 | 2.048222 | TGCCGGCTCAGTCTTTCG | 60.048 | 61.111 | 29.70 | 0.00 | 0.00 | 3.46 |
2928 | 9177 | 0.674895 | ATGTGCCGGCTCAGTCTTTC | 60.675 | 55.000 | 32.06 | 10.69 | 0.00 | 2.62 |
2929 | 9178 | 0.674895 | GATGTGCCGGCTCAGTCTTT | 60.675 | 55.000 | 32.06 | 17.98 | 0.00 | 2.52 |
2931 | 9180 | 1.620739 | ATGATGTGCCGGCTCAGTCT | 61.621 | 55.000 | 32.06 | 18.70 | 0.00 | 3.24 |
2932 | 9181 | 1.153289 | ATGATGTGCCGGCTCAGTC | 60.153 | 57.895 | 32.06 | 26.67 | 0.00 | 3.51 |
2935 | 9184 | 0.745486 | CAAGATGATGTGCCGGCTCA | 60.745 | 55.000 | 31.27 | 31.27 | 0.00 | 4.26 |
2936 | 9185 | 0.462581 | TCAAGATGATGTGCCGGCTC | 60.463 | 55.000 | 29.70 | 25.38 | 0.00 | 4.70 |
2938 | 9187 | 0.462581 | TCTCAAGATGATGTGCCGGC | 60.463 | 55.000 | 22.73 | 22.73 | 0.00 | 6.13 |
2939 | 9188 | 2.251409 | ATCTCAAGATGATGTGCCGG | 57.749 | 50.000 | 0.00 | 0.00 | 32.68 | 6.13 |
2940 | 9189 | 4.318333 | CGTAAATCTCAAGATGATGTGCCG | 60.318 | 45.833 | 0.00 | 0.00 | 34.49 | 5.69 |
2941 | 9190 | 4.811024 | TCGTAAATCTCAAGATGATGTGCC | 59.189 | 41.667 | 0.00 | 0.00 | 34.49 | 5.01 |
2942 | 9191 | 5.973651 | TCGTAAATCTCAAGATGATGTGC | 57.026 | 39.130 | 0.00 | 0.00 | 34.49 | 4.57 |
2943 | 9192 | 7.276438 | TGACTTCGTAAATCTCAAGATGATGTG | 59.724 | 37.037 | 0.00 | 0.00 | 34.49 | 3.21 |
2945 | 9194 | 7.254252 | GGTGACTTCGTAAATCTCAAGATGATG | 60.254 | 40.741 | 0.00 | 0.00 | 34.49 | 3.07 |
2948 | 9197 | 5.004821 | CGGTGACTTCGTAAATCTCAAGATG | 59.995 | 44.000 | 0.00 | 0.00 | 34.49 | 2.90 |
2949 | 9198 | 5.103000 | CGGTGACTTCGTAAATCTCAAGAT | 58.897 | 41.667 | 0.00 | 0.00 | 36.07 | 2.40 |
2951 | 9200 | 4.235360 | ACGGTGACTTCGTAAATCTCAAG | 58.765 | 43.478 | 0.00 | 0.00 | 39.22 | 3.02 |
2953 | 9202 | 3.928727 | ACGGTGACTTCGTAAATCTCA | 57.071 | 42.857 | 0.00 | 0.00 | 39.22 | 3.27 |
2955 | 9204 | 3.428589 | GCCTACGGTGACTTCGTAAATCT | 60.429 | 47.826 | 0.00 | 0.00 | 41.62 | 2.40 |
2965 | 10019 | 2.341101 | CGAGGTGCCTACGGTGACT | 61.341 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
2971 | 10025 | 2.099831 | GACGACGAGGTGCCTACG | 59.900 | 66.667 | 0.00 | 9.22 | 0.00 | 3.51 |
2972 | 10026 | 2.099831 | CGACGACGAGGTGCCTAC | 59.900 | 66.667 | 0.00 | 0.00 | 42.66 | 3.18 |
2993 | 10047 | 0.966920 | TCAGTGGGAGAAGACGTTCC | 59.033 | 55.000 | 0.00 | 0.00 | 32.48 | 3.62 |
2994 | 10048 | 2.814280 | TTCAGTGGGAGAAGACGTTC | 57.186 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2995 | 10049 | 2.807108 | GCTTTCAGTGGGAGAAGACGTT | 60.807 | 50.000 | 0.00 | 0.00 | 0.00 | 3.99 |
2996 | 10050 | 1.270358 | GCTTTCAGTGGGAGAAGACGT | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
2997 | 10051 | 1.270305 | TGCTTTCAGTGGGAGAAGACG | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
2998 | 10052 | 2.147150 | GTGCTTTCAGTGGGAGAAGAC | 58.853 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
2999 | 10053 | 1.768275 | TGTGCTTTCAGTGGGAGAAGA | 59.232 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
3000 | 10054 | 2.260844 | TGTGCTTTCAGTGGGAGAAG | 57.739 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3001 | 10055 | 2.783135 | GATGTGCTTTCAGTGGGAGAA | 58.217 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
3002 | 10056 | 1.338105 | CGATGTGCTTTCAGTGGGAGA | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
3003 | 10057 | 1.081892 | CGATGTGCTTTCAGTGGGAG | 58.918 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3004 | 10058 | 0.955428 | GCGATGTGCTTTCAGTGGGA | 60.955 | 55.000 | 0.00 | 0.00 | 41.73 | 4.37 |
3005 | 10059 | 1.503542 | GCGATGTGCTTTCAGTGGG | 59.496 | 57.895 | 0.00 | 0.00 | 41.73 | 4.61 |
3006 | 10060 | 1.503542 | GGCGATGTGCTTTCAGTGG | 59.496 | 57.895 | 0.00 | 0.00 | 45.43 | 4.00 |
3007 | 10061 | 1.133253 | CGGCGATGTGCTTTCAGTG | 59.867 | 57.895 | 0.00 | 0.00 | 45.43 | 3.66 |
3008 | 10062 | 2.034879 | CCGGCGATGTGCTTTCAGT | 61.035 | 57.895 | 9.30 | 0.00 | 45.43 | 3.41 |
3009 | 10063 | 1.298157 | TTCCGGCGATGTGCTTTCAG | 61.298 | 55.000 | 9.30 | 0.00 | 45.43 | 3.02 |
3010 | 10064 | 0.886938 | TTTCCGGCGATGTGCTTTCA | 60.887 | 50.000 | 9.30 | 0.00 | 45.43 | 2.69 |
3011 | 10065 | 0.451783 | ATTTCCGGCGATGTGCTTTC | 59.548 | 50.000 | 9.30 | 0.00 | 45.43 | 2.62 |
3012 | 10066 | 0.451783 | GATTTCCGGCGATGTGCTTT | 59.548 | 50.000 | 9.30 | 0.00 | 45.43 | 3.51 |
3013 | 10067 | 1.376609 | GGATTTCCGGCGATGTGCTT | 61.377 | 55.000 | 9.30 | 0.00 | 45.43 | 3.91 |
3014 | 10068 | 1.819632 | GGATTTCCGGCGATGTGCT | 60.820 | 57.895 | 9.30 | 0.00 | 45.43 | 4.40 |
3015 | 10069 | 1.819632 | AGGATTTCCGGCGATGTGC | 60.820 | 57.895 | 9.30 | 0.00 | 42.08 | 4.57 |
3016 | 10070 | 0.461870 | TCAGGATTTCCGGCGATGTG | 60.462 | 55.000 | 9.30 | 0.00 | 42.08 | 3.21 |
3017 | 10071 | 0.251916 | TTCAGGATTTCCGGCGATGT | 59.748 | 50.000 | 9.30 | 0.00 | 42.08 | 3.06 |
3018 | 10072 | 1.378531 | TTTCAGGATTTCCGGCGATG | 58.621 | 50.000 | 9.30 | 0.00 | 42.08 | 3.84 |
3019 | 10073 | 2.348411 | ATTTCAGGATTTCCGGCGAT | 57.652 | 45.000 | 9.30 | 0.00 | 42.08 | 4.58 |
3020 | 10074 | 2.992124 | TATTTCAGGATTTCCGGCGA | 57.008 | 45.000 | 9.30 | 0.00 | 42.08 | 5.54 |
3021 | 10075 | 4.537015 | GATTTATTTCAGGATTTCCGGCG | 58.463 | 43.478 | 0.00 | 0.00 | 42.08 | 6.46 |
3022 | 10076 | 4.340950 | TGGATTTATTTCAGGATTTCCGGC | 59.659 | 41.667 | 0.00 | 0.00 | 42.08 | 6.13 |
3023 | 10077 | 6.076981 | CTGGATTTATTTCAGGATTTCCGG | 57.923 | 41.667 | 0.00 | 0.00 | 42.08 | 5.14 |
3031 | 10085 | 9.502091 | TCGTATTATTCCTGGATTTATTTCAGG | 57.498 | 33.333 | 0.00 | 0.00 | 46.91 | 3.86 |
3033 | 10087 | 8.999431 | GCTCGTATTATTCCTGGATTTATTTCA | 58.001 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
3034 | 10088 | 8.999431 | TGCTCGTATTATTCCTGGATTTATTTC | 58.001 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
3035 | 10089 | 8.784043 | GTGCTCGTATTATTCCTGGATTTATTT | 58.216 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3036 | 10090 | 7.390718 | GGTGCTCGTATTATTCCTGGATTTATT | 59.609 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
3037 | 10091 | 6.879458 | GGTGCTCGTATTATTCCTGGATTTAT | 59.121 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
3038 | 10092 | 6.183361 | TGGTGCTCGTATTATTCCTGGATTTA | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
3039 | 10093 | 5.063880 | GGTGCTCGTATTATTCCTGGATTT | 58.936 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
3040 | 10094 | 4.102524 | TGGTGCTCGTATTATTCCTGGATT | 59.897 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
3041 | 10095 | 3.646162 | TGGTGCTCGTATTATTCCTGGAT | 59.354 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3042 | 10096 | 3.035363 | TGGTGCTCGTATTATTCCTGGA | 58.965 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
3043 | 10097 | 3.393800 | CTGGTGCTCGTATTATTCCTGG | 58.606 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3044 | 10098 | 3.069586 | TCCTGGTGCTCGTATTATTCCTG | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
3045 | 10099 | 3.305720 | TCCTGGTGCTCGTATTATTCCT | 58.694 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
3046 | 10100 | 3.746045 | TCCTGGTGCTCGTATTATTCC | 57.254 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
3047 | 10101 | 5.758296 | TCAAATCCTGGTGCTCGTATTATTC | 59.242 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3048 | 10102 | 5.680619 | TCAAATCCTGGTGCTCGTATTATT | 58.319 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
3049 | 10103 | 5.290493 | TCAAATCCTGGTGCTCGTATTAT | 57.710 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
3050 | 10104 | 4.746535 | TCAAATCCTGGTGCTCGTATTA | 57.253 | 40.909 | 0.00 | 0.00 | 0.00 | 0.98 |
3051 | 10105 | 3.627395 | TCAAATCCTGGTGCTCGTATT | 57.373 | 42.857 | 0.00 | 0.00 | 0.00 | 1.89 |
3052 | 10106 | 3.270877 | GTTCAAATCCTGGTGCTCGTAT | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
3053 | 10107 | 2.614481 | GGTTCAAATCCTGGTGCTCGTA | 60.614 | 50.000 | 0.00 | 0.00 | 0.00 | 3.43 |
3054 | 10108 | 1.523758 | GTTCAAATCCTGGTGCTCGT | 58.476 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3055 | 10109 | 0.804989 | GGTTCAAATCCTGGTGCTCG | 59.195 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3056 | 10110 | 1.177401 | GGGTTCAAATCCTGGTGCTC | 58.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3057 | 10111 | 0.779997 | AGGGTTCAAATCCTGGTGCT | 59.220 | 50.000 | 0.00 | 0.00 | 38.36 | 4.40 |
3058 | 10112 | 3.363787 | AGGGTTCAAATCCTGGTGC | 57.636 | 52.632 | 0.00 | 0.00 | 38.36 | 5.01 |
3063 | 10117 | 1.455822 | TCCACCAGGGTTCAAATCCT | 58.544 | 50.000 | 0.00 | 0.00 | 41.23 | 3.24 |
3064 | 10118 | 2.532250 | ATCCACCAGGGTTCAAATCC | 57.468 | 50.000 | 0.00 | 0.00 | 38.11 | 3.01 |
3071 | 10125 | 0.999712 | ATTCCGAATCCACCAGGGTT | 59.000 | 50.000 | 0.00 | 0.00 | 42.31 | 4.11 |
3072 | 10126 | 1.887797 | TATTCCGAATCCACCAGGGT | 58.112 | 50.000 | 0.00 | 0.00 | 38.11 | 4.34 |
3073 | 10127 | 2.371841 | TGATATTCCGAATCCACCAGGG | 59.628 | 50.000 | 0.00 | 0.00 | 34.83 | 4.45 |
3074 | 10128 | 3.071602 | AGTGATATTCCGAATCCACCAGG | 59.928 | 47.826 | 16.70 | 0.00 | 0.00 | 4.45 |
3075 | 10129 | 4.060900 | CAGTGATATTCCGAATCCACCAG | 58.939 | 47.826 | 16.70 | 10.20 | 0.00 | 4.00 |
3076 | 10130 | 3.454447 | ACAGTGATATTCCGAATCCACCA | 59.546 | 43.478 | 16.70 | 3.24 | 0.00 | 4.17 |
3077 | 10131 | 4.058817 | GACAGTGATATTCCGAATCCACC | 58.941 | 47.826 | 16.70 | 5.13 | 0.00 | 4.61 |
3078 | 10132 | 4.058817 | GGACAGTGATATTCCGAATCCAC | 58.941 | 47.826 | 14.22 | 14.22 | 0.00 | 4.02 |
3079 | 10133 | 3.709141 | TGGACAGTGATATTCCGAATCCA | 59.291 | 43.478 | 0.00 | 0.00 | 31.38 | 3.41 |
3080 | 10134 | 4.058817 | GTGGACAGTGATATTCCGAATCC | 58.941 | 47.826 | 0.00 | 0.00 | 31.38 | 3.01 |
3081 | 10135 | 4.058817 | GGTGGACAGTGATATTCCGAATC | 58.941 | 47.826 | 0.00 | 0.00 | 31.38 | 2.52 |
3082 | 10136 | 3.711704 | AGGTGGACAGTGATATTCCGAAT | 59.288 | 43.478 | 0.00 | 0.00 | 31.38 | 3.34 |
3083 | 10137 | 3.104512 | AGGTGGACAGTGATATTCCGAA | 58.895 | 45.455 | 0.00 | 0.00 | 31.38 | 4.30 |
3084 | 10138 | 2.747177 | AGGTGGACAGTGATATTCCGA | 58.253 | 47.619 | 0.00 | 0.00 | 31.38 | 4.55 |
3085 | 10139 | 4.369182 | GTTAGGTGGACAGTGATATTCCG | 58.631 | 47.826 | 0.00 | 0.00 | 31.38 | 4.30 |
3086 | 10140 | 4.163458 | TGGTTAGGTGGACAGTGATATTCC | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
3087 | 10141 | 5.353394 | TGGTTAGGTGGACAGTGATATTC | 57.647 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
3088 | 10142 | 5.667626 | AGATGGTTAGGTGGACAGTGATATT | 59.332 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3089 | 10143 | 5.219739 | AGATGGTTAGGTGGACAGTGATAT | 58.780 | 41.667 | 0.00 | 0.00 | 0.00 | 1.63 |
3090 | 10144 | 4.620723 | AGATGGTTAGGTGGACAGTGATA | 58.379 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
3091 | 10145 | 3.452627 | GAGATGGTTAGGTGGACAGTGAT | 59.547 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
3092 | 10146 | 2.832129 | GAGATGGTTAGGTGGACAGTGA | 59.168 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3093 | 10147 | 2.567169 | TGAGATGGTTAGGTGGACAGTG | 59.433 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3094 | 10148 | 2.902608 | TGAGATGGTTAGGTGGACAGT | 58.097 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
3095 | 10149 | 3.600388 | GTTGAGATGGTTAGGTGGACAG | 58.400 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3096 | 10150 | 2.304761 | GGTTGAGATGGTTAGGTGGACA | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3097 | 10151 | 2.304761 | TGGTTGAGATGGTTAGGTGGAC | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3098 | 10152 | 2.304761 | GTGGTTGAGATGGTTAGGTGGA | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3099 | 10153 | 2.039746 | TGTGGTTGAGATGGTTAGGTGG | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3100 | 10154 | 3.338249 | CTGTGGTTGAGATGGTTAGGTG | 58.662 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3101 | 10155 | 2.305927 | CCTGTGGTTGAGATGGTTAGGT | 59.694 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
3102 | 10156 | 2.305927 | ACCTGTGGTTGAGATGGTTAGG | 59.694 | 50.000 | 0.00 | 0.00 | 27.29 | 2.69 |
3103 | 10157 | 3.703001 | ACCTGTGGTTGAGATGGTTAG | 57.297 | 47.619 | 0.00 | 0.00 | 27.29 | 2.34 |
3117 | 10171 | 3.457610 | AGATTTGCAAACCAACCTGTG | 57.542 | 42.857 | 15.41 | 0.00 | 31.97 | 3.66 |
3118 | 10172 | 4.499019 | CGTTAGATTTGCAAACCAACCTGT | 60.499 | 41.667 | 15.41 | 0.00 | 31.97 | 4.00 |
3119 | 10173 | 3.980775 | CGTTAGATTTGCAAACCAACCTG | 59.019 | 43.478 | 15.41 | 3.97 | 31.97 | 4.00 |
3120 | 10174 | 3.634910 | ACGTTAGATTTGCAAACCAACCT | 59.365 | 39.130 | 15.41 | 9.16 | 31.97 | 3.50 |
3121 | 10175 | 3.733727 | CACGTTAGATTTGCAAACCAACC | 59.266 | 43.478 | 15.41 | 2.08 | 31.97 | 3.77 |
3122 | 10176 | 4.206200 | CACACGTTAGATTTGCAAACCAAC | 59.794 | 41.667 | 15.41 | 16.21 | 31.97 | 3.77 |
3123 | 10177 | 4.142359 | ACACACGTTAGATTTGCAAACCAA | 60.142 | 37.500 | 15.41 | 5.95 | 0.00 | 3.67 |
3124 | 10178 | 3.378742 | ACACACGTTAGATTTGCAAACCA | 59.621 | 39.130 | 15.41 | 0.00 | 0.00 | 3.67 |
3125 | 10179 | 3.959943 | ACACACGTTAGATTTGCAAACC | 58.040 | 40.909 | 15.41 | 4.19 | 0.00 | 3.27 |
3126 | 10180 | 6.343616 | CGTTAACACACGTTAGATTTGCAAAC | 60.344 | 38.462 | 15.41 | 8.73 | 38.79 | 2.93 |
3127 | 10181 | 5.677612 | CGTTAACACACGTTAGATTTGCAAA | 59.322 | 36.000 | 15.44 | 15.44 | 38.79 | 3.68 |
3128 | 10182 | 5.199000 | CGTTAACACACGTTAGATTTGCAA | 58.801 | 37.500 | 6.39 | 0.00 | 38.79 | 4.08 |
3129 | 10183 | 4.763874 | CGTTAACACACGTTAGATTTGCA | 58.236 | 39.130 | 6.39 | 0.00 | 38.79 | 4.08 |
3276 | 10330 | 1.116536 | TGGTGACCGAGCAGTGGTTA | 61.117 | 55.000 | 0.00 | 0.00 | 40.63 | 2.85 |
3649 | 10712 | 0.462759 | GAGTATTCCGGCAGCTTGCT | 60.463 | 55.000 | 0.00 | 0.00 | 44.28 | 3.91 |
3720 | 10795 | 3.730715 | GCACTGAGTTTTCGTTCATTTGG | 59.269 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
3818 | 10893 | 2.223377 | ACTGAATTTTCGTCGAACCAGC | 59.777 | 45.455 | 7.29 | 0.00 | 0.00 | 4.85 |
4494 | 11577 | 1.153842 | TATCACAGGCGCACTCACG | 60.154 | 57.895 | 10.83 | 0.00 | 0.00 | 4.35 |
4918 | 12060 | 6.465084 | CAGGGCATAAGTTATAAGGTAGACC | 58.535 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5011 | 12256 | 6.351202 | CCTCCAATCCAAATTAAGTGATGCAA | 60.351 | 38.462 | 0.00 | 0.00 | 0.00 | 4.08 |
5015 | 12260 | 7.184862 | ACTTCCTCCAATCCAAATTAAGTGAT | 58.815 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
5117 | 12382 | 4.034858 | GGATGCAGCATATCATATGGTTCG | 59.965 | 45.833 | 8.22 | 0.00 | 0.00 | 3.95 |
5125 | 12590 | 3.801307 | TTCAGGGATGCAGCATATCAT | 57.199 | 42.857 | 8.22 | 0.00 | 0.00 | 2.45 |
5168 | 12659 | 6.092122 | CGATAGAAGTTAGATGTGCCAACAAA | 59.908 | 38.462 | 0.00 | 0.00 | 38.05 | 2.83 |
5288 | 15539 | 4.041075 | TGAGGGTGTGTGCTGTAGATAAAA | 59.959 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
5578 | 15866 | 3.621715 | GGCAAAGGATACGGTAAGTTCAG | 59.378 | 47.826 | 0.00 | 0.00 | 46.39 | 3.02 |
5581 | 15869 | 3.706600 | TGGCAAAGGATACGGTAAGTT | 57.293 | 42.857 | 0.00 | 0.00 | 46.39 | 2.66 |
5739 | 16037 | 1.142870 | CCGAGGAGCAAAATATGGGGA | 59.857 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
5835 | 16133 | 5.355071 | TGAAACTAACAATGCAGCATCCTAG | 59.645 | 40.000 | 8.77 | 11.71 | 0.00 | 3.02 |
5882 | 16193 | 5.144359 | CCTGTCGGAAATTAACAAAAGACG | 58.856 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
5970 | 16314 | 5.127693 | AGTAGACGATGATGCAGTTATCC | 57.872 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
5984 | 16328 | 1.937278 | CTGCGTAGAGGAGTAGACGA | 58.063 | 55.000 | 0.00 | 0.00 | 37.50 | 4.20 |
6140 | 16484 | 5.126779 | TGCAGAAGTTATTGTTGGTGTGTA | 58.873 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
6156 | 16657 | 3.690139 | AGTCTGAATGAATGCTGCAGAAG | 59.310 | 43.478 | 20.43 | 0.00 | 37.35 | 2.85 |
6200 | 16702 | 7.873719 | TCAGAAGATTGTACCAACTGAAAAA | 57.126 | 32.000 | 0.00 | 0.00 | 31.51 | 1.94 |
6232 | 16846 | 4.835284 | ACCTGAAAACCCAAACAATTGT | 57.165 | 36.364 | 4.92 | 4.92 | 34.60 | 2.71 |
6390 | 17005 | 2.356313 | CAGAACCGTGAGCGTGCT | 60.356 | 61.111 | 0.00 | 0.00 | 36.15 | 4.40 |
6403 | 17018 | 0.389817 | CCCAAGATCGACGTGCAGAA | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6589 | 17204 | 4.916293 | TGATGGCCTCGGCGATGC | 62.916 | 66.667 | 25.83 | 25.83 | 39.59 | 3.91 |
6685 | 17300 | 1.443194 | GCGTCGCCGTAGAACTTCA | 60.443 | 57.895 | 5.75 | 0.00 | 36.15 | 3.02 |
6783 | 17398 | 0.465460 | TTGAACCGCTCAACTGCCTT | 60.465 | 50.000 | 0.00 | 0.00 | 39.20 | 4.35 |
7434 | 18230 | 1.593750 | CTAGCGATCAGGTGGCTGC | 60.594 | 63.158 | 0.00 | 0.00 | 42.31 | 5.25 |
7581 | 18386 | 0.177836 | TATGTCCAGGTGCCATCGTG | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
7598 | 18403 | 3.165087 | TCCACCGTCGGGATCTTATAT | 57.835 | 47.619 | 17.28 | 0.00 | 36.97 | 0.86 |
7601 | 18406 | 2.233271 | GTATCCACCGTCGGGATCTTA | 58.767 | 52.381 | 17.28 | 0.00 | 43.96 | 2.10 |
7619 | 18424 | 1.367346 | TGAACTGCTTGGGGATGGTA | 58.633 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
7850 | 18655 | 2.596338 | TGCCTCTCCACGACGTCA | 60.596 | 61.111 | 17.16 | 0.00 | 0.00 | 4.35 |
7940 | 18748 | 1.892474 | ACGCCAAATTACATGCCAACT | 59.108 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
7943 | 18751 | 1.067985 | CACACGCCAAATTACATGCCA | 60.068 | 47.619 | 0.00 | 0.00 | 0.00 | 4.92 |
7988 | 18798 | 8.697846 | ACATAACGAAATCTTAATCGACTGAA | 57.302 | 30.769 | 3.36 | 0.00 | 41.43 | 3.02 |
8019 | 18829 | 9.749340 | TCATGCAAGATCAAAGGAATATATGAT | 57.251 | 29.630 | 0.00 | 0.00 | 35.33 | 2.45 |
8021 | 18831 | 9.841880 | CTTCATGCAAGATCAAAGGAATATATG | 57.158 | 33.333 | 0.00 | 0.00 | 33.29 | 1.78 |
8098 | 20022 | 9.950496 | AAGTGACATAGAATTAAGAAGTGACAT | 57.050 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
8099 | 20023 | 9.208022 | CAAGTGACATAGAATTAAGAAGTGACA | 57.792 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
8100 | 20024 | 9.424319 | TCAAGTGACATAGAATTAAGAAGTGAC | 57.576 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
8101 | 20025 | 9.424319 | GTCAAGTGACATAGAATTAAGAAGTGA | 57.576 | 33.333 | 6.57 | 0.00 | 44.18 | 3.41 |
8155 | 20079 | 5.614324 | TTCATAGGGTGTGGTTAGATCTG | 57.386 | 43.478 | 5.18 | 0.00 | 0.00 | 2.90 |
8238 | 20165 | 0.728843 | TTAACCAGGAGGGAGGGGAT | 59.271 | 55.000 | 0.00 | 0.00 | 41.15 | 3.85 |
8274 | 20203 | 0.606401 | CGTGTTGAAGATGCCCAGGT | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
8277 | 20206 | 0.605319 | GTCCGTGTTGAAGATGCCCA | 60.605 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
8286 | 20215 | 4.610605 | TCATTTTAGGAGTCCGTGTTGA | 57.389 | 40.909 | 2.76 | 2.36 | 0.00 | 3.18 |
8305 | 20234 | 1.274167 | GGTGGACGGATACAGTGTTCA | 59.726 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
8319 | 20248 | 4.333926 | GCTCTCATATCACTTTTGGTGGAC | 59.666 | 45.833 | 0.00 | 0.00 | 45.38 | 4.02 |
8325 | 20254 | 3.535561 | ACCGGCTCTCATATCACTTTTG | 58.464 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
8343 | 20272 | 4.932799 | TGTTTGAGGTACACAATATGACCG | 59.067 | 41.667 | 0.00 | 0.00 | 38.93 | 4.79 |
8346 | 20275 | 6.876789 | ACGAATGTTTGAGGTACACAATATGA | 59.123 | 34.615 | 0.00 | 0.00 | 38.93 | 2.15 |
8351 | 20280 | 7.153315 | TGTATACGAATGTTTGAGGTACACAA | 58.847 | 34.615 | 0.00 | 0.00 | 37.09 | 3.33 |
8352 | 20281 | 6.689554 | TGTATACGAATGTTTGAGGTACACA | 58.310 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
8401 | 20330 | 8.060931 | TGGTCCGATTTAAATGAAAATCATCA | 57.939 | 30.769 | 5.17 | 0.00 | 43.18 | 3.07 |
8508 | 20785 | 1.142667 | TGAAACACAGATGCCTCCACA | 59.857 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
8517 | 20794 | 0.108585 | ACTGGGCGTGAAACACAGAT | 59.891 | 50.000 | 0.00 | 0.00 | 36.57 | 2.90 |
8531 | 20808 | 1.609783 | GGACATGGGGAAGACTGGG | 59.390 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
8534 | 20811 | 0.544357 | TGTCGGACATGGGGAAGACT | 60.544 | 55.000 | 6.76 | 0.00 | 0.00 | 3.24 |
8566 | 20843 | 2.207501 | CTGCACTTCCTGGGGCTCAT | 62.208 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
8589 | 20866 | 4.502259 | CCACATTCTATTCTTCCTCTCCCG | 60.502 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
8639 | 20916 | 1.149174 | GGGATGCGGATGTGACCAT | 59.851 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
8651 | 20928 | 2.501723 | TGAAGAGTAGGAAGTGGGATGC | 59.498 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
8652 | 20929 | 4.406972 | TGATGAAGAGTAGGAAGTGGGATG | 59.593 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
8653 | 20930 | 4.407296 | GTGATGAAGAGTAGGAAGTGGGAT | 59.593 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
8657 | 20934 | 3.429547 | CCGGTGATGAAGAGTAGGAAGTG | 60.430 | 52.174 | 0.00 | 0.00 | 0.00 | 3.16 |
8700 | 20977 | 0.796312 | CGAACATGGGACACTTTCGG | 59.204 | 55.000 | 0.00 | 0.00 | 46.07 | 4.30 |
8707 | 20984 | 2.024868 | CGAACGCGAACATGGGACA | 61.025 | 57.895 | 15.93 | 0.00 | 41.96 | 4.02 |
8743 | 21020 | 2.244651 | AGACGCACTTCAACACCGC | 61.245 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
8747 | 21024 | 3.318875 | CGCAGACGCACTTCAACA | 58.681 | 55.556 | 0.00 | 0.00 | 38.40 | 3.33 |
8791 | 21068 | 1.038130 | AGAGTAGCCGGACGATGCTT | 61.038 | 55.000 | 5.05 | 0.00 | 39.00 | 3.91 |
8793 | 21070 | 0.595310 | GAAGAGTAGCCGGACGATGC | 60.595 | 60.000 | 5.05 | 0.00 | 0.00 | 3.91 |
8844 | 21129 | 6.601613 | TGTATTTGATCGCCTCTTTAATGGTT | 59.398 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
8851 | 21136 | 5.106157 | CCAAAGTGTATTTGATCGCCTCTTT | 60.106 | 40.000 | 2.01 | 0.00 | 0.00 | 2.52 |
8852 | 21137 | 4.396166 | CCAAAGTGTATTTGATCGCCTCTT | 59.604 | 41.667 | 2.01 | 0.00 | 0.00 | 2.85 |
8893 | 21178 | 8.160521 | TCGTGTTATTTGATTCCTTTTTCTGA | 57.839 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
8905 | 21190 | 7.110155 | ACTTTGTCCCTATCGTGTTATTTGAT | 58.890 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
8913 | 21198 | 3.128242 | CGACTACTTTGTCCCTATCGTGT | 59.872 | 47.826 | 0.00 | 0.00 | 33.70 | 4.49 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.