Multiple sequence alignment - TraesCS5A01G426800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G426800 chr5A 100.000 5648 0 0 1 5648 611654278 611648631 0.000000e+00 10430.0
1 TraesCS5A01G426800 chr5A 84.116 447 61 7 1384 1825 611564635 611565076 1.880000e-114 424.0
2 TraesCS5A01G426800 chr5B 96.046 2782 97 6 2659 5431 604162861 604160084 0.000000e+00 4516.0
3 TraesCS5A01G426800 chr5B 93.801 2065 74 17 547 2577 604164903 604162859 0.000000e+00 3055.0
4 TraesCS5A01G426800 chr5B 83.929 448 60 9 1384 1825 604065331 604065772 8.750000e-113 418.0
5 TraesCS5A01G426800 chr5B 95.982 224 8 1 5426 5648 604160021 604159798 4.160000e-96 363.0
6 TraesCS5A01G426800 chr5D 95.519 2053 68 10 2659 4700 490034008 490031969 0.000000e+00 3260.0
7 TraesCS5A01G426800 chr5D 93.085 2097 68 20 536 2577 490036080 490034006 0.000000e+00 2998.0
8 TraesCS5A01G426800 chr5D 96.499 714 22 3 4719 5431 490029173 490028462 0.000000e+00 1177.0
9 TraesCS5A01G426800 chr5D 86.758 438 37 10 1 437 490045193 490044776 8.570000e-128 468.0
10 TraesCS5A01G426800 chr5D 84.081 446 63 5 1384 1825 489905900 489906341 1.880000e-114 424.0
11 TraesCS5A01G426800 chr5D 96.413 223 8 0 5426 5648 490028399 490028177 8.940000e-98 368.0
12 TraesCS5A01G426800 chr5D 92.308 91 6 1 2571 2661 175298815 175298726 1.650000e-25 128.0
13 TraesCS5A01G426800 chr2D 83.015 471 70 7 1361 1826 564095479 564095014 8.750000e-113 418.0
14 TraesCS5A01G426800 chr2D 78.841 397 60 17 3300 3676 296851491 296851883 4.370000e-61 246.0
15 TraesCS5A01G426800 chr2D 91.579 95 7 1 2568 2662 596590438 596590531 4.590000e-26 130.0
16 TraesCS5A01G426800 chr2B 82.803 471 71 7 1361 1826 675356165 675355700 4.070000e-111 412.0
17 TraesCS5A01G426800 chr2B 78.607 402 64 15 3307 3688 364731365 364730966 4.370000e-61 246.0
18 TraesCS5A01G426800 chr2B 93.258 89 5 1 2573 2661 800126935 800127022 4.590000e-26 130.0
19 TraesCS5A01G426800 chr2A 82.803 471 71 7 1361 1826 704776734 704776269 4.070000e-111 412.0
20 TraesCS5A01G426800 chr2A 78.589 397 61 17 3300 3676 369500911 369501303 2.030000e-59 241.0
21 TraesCS5A01G426800 chr6A 82.469 405 62 8 1361 1760 617657118 617657518 4.190000e-91 346.0
22 TraesCS5A01G426800 chrUn 89.286 112 4 6 2574 2682 5020832 5020726 3.550000e-27 134.0
23 TraesCS5A01G426800 chrUn 92.308 91 6 1 2576 2666 378270652 378270563 1.650000e-25 128.0
24 TraesCS5A01G426800 chrUn 92.308 91 6 1 2576 2666 447954262 447954351 1.650000e-25 128.0
25 TraesCS5A01G426800 chr1A 91.579 95 7 1 2575 2669 241320008 241319915 4.590000e-26 130.0
26 TraesCS5A01G426800 chr4D 91.489 94 7 1 2575 2668 224838522 224838614 1.650000e-25 128.0
27 TraesCS5A01G426800 chr3A 87.037 108 12 2 2560 2667 41990832 41990727 2.760000e-23 121.0
28 TraesCS5A01G426800 chr3A 91.489 47 4 0 451 497 120227442 120227488 1.310000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G426800 chr5A 611648631 611654278 5647 True 10430.000000 10430 100.000000 1 5648 1 chr5A.!!$R1 5647
1 TraesCS5A01G426800 chr5B 604159798 604164903 5105 True 2644.666667 4516 95.276333 547 5648 3 chr5B.!!$R1 5101
2 TraesCS5A01G426800 chr5D 490028177 490036080 7903 True 1950.750000 3260 95.379000 536 5648 4 chr5D.!!$R3 5112

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.034896 CAAGGCTACCGTGTCTGGTT 59.965 55.0 0.00 0.00 43.56 3.67 F
61 62 0.035820 TCGGGGCGCTAAAATGAACT 60.036 50.0 7.64 0.00 0.00 3.01 F
103 104 0.041135 GGAGTCGCTAGAACGGATCG 60.041 60.0 0.00 0.00 0.00 3.69 F
104 105 0.041135 GAGTCGCTAGAACGGATCGG 60.041 60.0 0.00 0.00 0.00 4.18 F
167 168 0.098728 GGTCCAATCGTGATTTGCCG 59.901 55.0 0.00 0.00 0.00 5.69 F
322 323 0.104620 ACTACCTGTGAACCCTGGGT 60.105 55.0 14.05 14.05 37.65 4.51 F
520 521 0.179043 CGGAGTCGGAGATGAGGAGA 60.179 60.0 0.00 0.00 40.67 3.71 F
889 915 0.257616 CTCCCCTTCTCTCTCTCCGT 59.742 60.0 0.00 0.00 0.00 4.69 F
2589 2650 0.252103 TGTGGTACTCCCTCTGTCCC 60.252 60.0 0.00 0.00 0.00 4.46 F
2948 3010 0.256177 GGGTTCCTCCATTCTGGGAC 59.744 60.0 0.00 0.00 38.32 4.46 F
3934 3999 1.034292 GGCCAAGAATCCTGTGCCTC 61.034 60.0 0.00 0.00 37.10 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2030 2067 0.324943 ATAGCCCGTGCAGAACAAGT 59.675 50.000 0.00 0.00 41.13 3.16 R
2037 2074 0.816825 AGCAATGATAGCCCGTGCAG 60.817 55.000 0.00 0.00 41.13 4.41 R
2048 2085 4.071961 TGATACTAACGGCAGCAATGAT 57.928 40.909 0.00 0.00 0.00 2.45 R
2063 2100 6.445451 ACATCCTGATTAGGCAATGATACT 57.555 37.500 11.02 0.00 44.22 2.12 R
2162 2203 1.134907 GGAAAATGGCATGAGCACTGG 60.135 52.381 0.00 0.00 44.61 4.00 R
2267 2322 3.056607 ACTGTACTGCCAAAATGAATGCC 60.057 43.478 0.00 0.00 0.00 4.40 R
2464 2525 3.366781 GGCTCAGAAAGAAACTGGCAATC 60.367 47.826 0.00 0.00 35.18 2.67 R
2643 2704 0.178970 GCTACTCCCTCCGTCCCATA 60.179 60.000 0.00 0.00 0.00 2.74 R
4037 4102 0.034059 AGCTGACAGACGGTTCCAAG 59.966 55.000 6.65 0.00 0.00 3.61 R
4593 4664 1.985473 TCACATTGCTTTGCTGTCCT 58.015 45.000 0.00 0.00 0.00 3.85 R
4989 7837 0.698238 TGGGCTACTGCAGTTGGAAT 59.302 50.000 27.06 0.12 41.91 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.152284 GTTGCTATAGTAACCCAAGGCT 57.848 45.455 19.67 0.00 35.10 4.58
22 23 5.286267 GTTGCTATAGTAACCCAAGGCTA 57.714 43.478 19.67 0.00 35.10 3.93
23 24 4.950205 TGCTATAGTAACCCAAGGCTAC 57.050 45.455 0.84 0.00 0.00 3.58
24 25 3.644738 TGCTATAGTAACCCAAGGCTACC 59.355 47.826 0.84 0.00 0.00 3.18
25 26 3.305881 GCTATAGTAACCCAAGGCTACCG 60.306 52.174 0.84 0.00 0.00 4.02
26 27 2.236489 TAGTAACCCAAGGCTACCGT 57.764 50.000 0.00 0.00 0.00 4.83
27 28 0.611714 AGTAACCCAAGGCTACCGTG 59.388 55.000 0.00 0.00 32.93 4.94
28 29 0.322648 GTAACCCAAGGCTACCGTGT 59.677 55.000 0.00 0.00 31.23 4.49
29 30 0.609662 TAACCCAAGGCTACCGTGTC 59.390 55.000 0.00 0.00 31.23 3.67
30 31 1.125711 AACCCAAGGCTACCGTGTCT 61.126 55.000 0.00 0.00 31.23 3.41
31 32 1.079127 CCCAAGGCTACCGTGTCTG 60.079 63.158 0.00 0.00 31.23 3.51
32 33 1.079127 CCAAGGCTACCGTGTCTGG 60.079 63.158 0.00 0.00 31.23 3.86
33 34 1.671742 CAAGGCTACCGTGTCTGGT 59.328 57.895 0.00 0.00 46.26 4.00
34 35 0.034896 CAAGGCTACCGTGTCTGGTT 59.965 55.000 0.00 0.00 43.56 3.67
35 36 0.320697 AAGGCTACCGTGTCTGGTTC 59.679 55.000 0.00 0.00 43.56 3.62
36 37 1.445582 GGCTACCGTGTCTGGTTCG 60.446 63.158 0.00 0.00 43.56 3.95
37 38 2.092882 GCTACCGTGTCTGGTTCGC 61.093 63.158 0.00 0.00 43.56 4.70
38 39 1.585006 CTACCGTGTCTGGTTCGCT 59.415 57.895 0.00 0.00 43.56 4.93
39 40 0.806868 CTACCGTGTCTGGTTCGCTA 59.193 55.000 0.00 0.00 43.56 4.26
40 41 0.523072 TACCGTGTCTGGTTCGCTAC 59.477 55.000 0.00 0.00 43.56 3.58
41 42 1.287815 CCGTGTCTGGTTCGCTACA 59.712 57.895 0.00 0.00 0.00 2.74
42 43 0.108804 CCGTGTCTGGTTCGCTACAT 60.109 55.000 0.00 0.00 0.00 2.29
43 44 1.269166 CGTGTCTGGTTCGCTACATC 58.731 55.000 0.00 0.00 0.00 3.06
44 45 1.269166 GTGTCTGGTTCGCTACATCG 58.731 55.000 0.00 0.00 0.00 3.84
45 46 0.172578 TGTCTGGTTCGCTACATCGG 59.827 55.000 0.00 0.00 0.00 4.18
46 47 0.527817 GTCTGGTTCGCTACATCGGG 60.528 60.000 0.00 0.00 0.00 5.14
47 48 1.227263 CTGGTTCGCTACATCGGGG 60.227 63.158 0.00 0.00 0.00 5.73
48 49 2.588034 GGTTCGCTACATCGGGGC 60.588 66.667 0.00 0.00 0.00 5.80
52 53 3.973516 CGCTACATCGGGGCGCTA 61.974 66.667 7.64 0.00 42.28 4.26
53 54 2.420043 GCTACATCGGGGCGCTAA 59.580 61.111 7.64 0.00 0.00 3.09
54 55 1.227438 GCTACATCGGGGCGCTAAA 60.227 57.895 7.64 0.00 0.00 1.85
55 56 0.812412 GCTACATCGGGGCGCTAAAA 60.812 55.000 7.64 0.00 0.00 1.52
56 57 1.878953 CTACATCGGGGCGCTAAAAT 58.121 50.000 7.64 0.00 0.00 1.82
57 58 1.531149 CTACATCGGGGCGCTAAAATG 59.469 52.381 7.64 9.44 0.00 2.32
58 59 0.107410 ACATCGGGGCGCTAAAATGA 60.107 50.000 7.64 0.00 0.00 2.57
59 60 1.021202 CATCGGGGCGCTAAAATGAA 58.979 50.000 7.64 0.00 0.00 2.57
60 61 1.021968 ATCGGGGCGCTAAAATGAAC 58.978 50.000 7.64 0.00 0.00 3.18
61 62 0.035820 TCGGGGCGCTAAAATGAACT 60.036 50.000 7.64 0.00 0.00 3.01
62 63 0.098728 CGGGGCGCTAAAATGAACTG 59.901 55.000 7.64 0.00 0.00 3.16
63 64 0.455815 GGGGCGCTAAAATGAACTGG 59.544 55.000 7.64 0.00 0.00 4.00
64 65 1.459450 GGGCGCTAAAATGAACTGGA 58.541 50.000 7.64 0.00 0.00 3.86
65 66 2.024414 GGGCGCTAAAATGAACTGGAT 58.976 47.619 7.64 0.00 0.00 3.41
66 67 3.211045 GGGCGCTAAAATGAACTGGATA 58.789 45.455 7.64 0.00 0.00 2.59
67 68 3.251004 GGGCGCTAAAATGAACTGGATAG 59.749 47.826 7.64 0.00 0.00 2.08
68 69 3.304057 GGCGCTAAAATGAACTGGATAGC 60.304 47.826 7.64 0.00 34.02 2.97
69 70 3.561725 GCGCTAAAATGAACTGGATAGCT 59.438 43.478 0.00 0.00 34.94 3.32
70 71 4.750098 GCGCTAAAATGAACTGGATAGCTA 59.250 41.667 0.00 0.00 34.94 3.32
71 72 5.333416 GCGCTAAAATGAACTGGATAGCTAC 60.333 44.000 0.00 0.00 34.94 3.58
72 73 5.107837 CGCTAAAATGAACTGGATAGCTACG 60.108 44.000 0.00 0.00 34.94 3.51
73 74 5.177696 GCTAAAATGAACTGGATAGCTACGG 59.822 44.000 0.00 0.00 34.42 4.02
74 75 5.353394 AAAATGAACTGGATAGCTACGGA 57.647 39.130 0.00 0.00 0.00 4.69
75 76 4.323553 AATGAACTGGATAGCTACGGAC 57.676 45.455 0.00 0.00 0.00 4.79
76 77 2.029623 TGAACTGGATAGCTACGGACC 58.970 52.381 0.00 0.00 0.00 4.46
77 78 2.308690 GAACTGGATAGCTACGGACCT 58.691 52.381 0.00 0.00 0.00 3.85
78 79 3.117776 TGAACTGGATAGCTACGGACCTA 60.118 47.826 0.00 0.00 0.00 3.08
79 80 2.861274 ACTGGATAGCTACGGACCTAC 58.139 52.381 0.00 0.00 0.00 3.18
80 81 2.174210 ACTGGATAGCTACGGACCTACA 59.826 50.000 0.00 0.00 0.00 2.74
81 82 2.814919 CTGGATAGCTACGGACCTACAG 59.185 54.545 0.00 0.00 0.00 2.74
82 83 2.174210 TGGATAGCTACGGACCTACAGT 59.826 50.000 0.00 0.00 0.00 3.55
83 84 3.392285 TGGATAGCTACGGACCTACAGTA 59.608 47.826 0.00 0.00 0.00 2.74
84 85 4.002316 GGATAGCTACGGACCTACAGTAG 58.998 52.174 0.00 0.00 45.40 2.57
97 98 4.799419 CTACAGTAGGAGTCGCTAGAAC 57.201 50.000 0.00 0.00 0.00 3.01
98 99 2.008329 ACAGTAGGAGTCGCTAGAACG 58.992 52.381 0.00 0.00 0.00 3.95
99 100 1.331138 CAGTAGGAGTCGCTAGAACGG 59.669 57.143 0.00 0.00 0.00 4.44
100 101 1.209019 AGTAGGAGTCGCTAGAACGGA 59.791 52.381 0.00 0.00 0.00 4.69
101 102 2.158784 AGTAGGAGTCGCTAGAACGGAT 60.159 50.000 0.00 0.00 0.00 4.18
102 103 1.310904 AGGAGTCGCTAGAACGGATC 58.689 55.000 0.00 0.00 0.00 3.36
103 104 0.041135 GGAGTCGCTAGAACGGATCG 60.041 60.000 0.00 0.00 0.00 3.69
104 105 0.041135 GAGTCGCTAGAACGGATCGG 60.041 60.000 0.00 0.00 0.00 4.18
105 106 1.657794 GTCGCTAGAACGGATCGGC 60.658 63.158 0.00 0.00 0.00 5.54
106 107 2.354773 CGCTAGAACGGATCGGCC 60.355 66.667 0.00 0.00 0.00 6.13
107 108 2.846652 CGCTAGAACGGATCGGCCT 61.847 63.158 0.00 1.07 0.00 5.19
108 109 1.300233 GCTAGAACGGATCGGCCTG 60.300 63.158 0.00 0.00 0.00 4.85
109 110 1.300233 CTAGAACGGATCGGCCTGC 60.300 63.158 0.00 0.00 0.00 4.85
110 111 1.739338 CTAGAACGGATCGGCCTGCT 61.739 60.000 0.00 0.00 0.00 4.24
111 112 0.466739 TAGAACGGATCGGCCTGCTA 60.467 55.000 0.00 0.00 0.00 3.49
112 113 1.115930 AGAACGGATCGGCCTGCTAT 61.116 55.000 0.00 0.00 0.00 2.97
113 114 0.601558 GAACGGATCGGCCTGCTATA 59.398 55.000 0.00 0.00 0.00 1.31
114 115 0.603569 AACGGATCGGCCTGCTATAG 59.396 55.000 0.00 0.00 0.00 1.31
115 116 0.539901 ACGGATCGGCCTGCTATAGT 60.540 55.000 0.00 0.00 0.00 2.12
116 117 0.109086 CGGATCGGCCTGCTATAGTG 60.109 60.000 0.00 0.00 0.00 2.74
117 118 0.969894 GGATCGGCCTGCTATAGTGT 59.030 55.000 0.00 0.00 0.00 3.55
118 119 2.168496 GGATCGGCCTGCTATAGTGTA 58.832 52.381 0.00 0.00 0.00 2.90
119 120 2.094649 GGATCGGCCTGCTATAGTGTAC 60.095 54.545 0.00 0.00 0.00 2.90
120 121 1.325355 TCGGCCTGCTATAGTGTACC 58.675 55.000 0.00 0.00 0.00 3.34
121 122 1.037493 CGGCCTGCTATAGTGTACCA 58.963 55.000 0.00 0.00 0.00 3.25
122 123 1.618837 CGGCCTGCTATAGTGTACCAT 59.381 52.381 0.00 0.00 0.00 3.55
123 124 2.610479 CGGCCTGCTATAGTGTACCATG 60.610 54.545 0.00 0.00 0.00 3.66
124 125 2.417719 GCCTGCTATAGTGTACCATGC 58.582 52.381 0.84 0.00 0.00 4.06
125 126 2.677199 CCTGCTATAGTGTACCATGCG 58.323 52.381 0.84 0.00 0.00 4.73
126 127 2.061773 CTGCTATAGTGTACCATGCGC 58.938 52.381 0.00 0.00 0.00 6.09
127 128 1.686587 TGCTATAGTGTACCATGCGCT 59.313 47.619 9.73 0.00 0.00 5.92
128 129 2.888414 TGCTATAGTGTACCATGCGCTA 59.112 45.455 9.73 0.00 34.08 4.26
129 130 3.057526 TGCTATAGTGTACCATGCGCTAG 60.058 47.826 9.73 0.00 33.23 3.42
130 131 3.190744 GCTATAGTGTACCATGCGCTAGA 59.809 47.826 9.73 0.00 33.23 2.43
131 132 3.924918 ATAGTGTACCATGCGCTAGAG 57.075 47.619 9.73 0.00 33.23 2.43
132 133 0.747255 AGTGTACCATGCGCTAGAGG 59.253 55.000 9.73 7.73 0.00 3.69
133 134 0.460311 GTGTACCATGCGCTAGAGGT 59.540 55.000 9.73 13.51 38.14 3.85
134 135 0.459899 TGTACCATGCGCTAGAGGTG 59.540 55.000 19.00 5.52 35.62 4.00
144 145 2.205074 CGCTAGAGGTGCAGTAAATGG 58.795 52.381 0.00 0.00 0.00 3.16
145 146 2.565841 GCTAGAGGTGCAGTAAATGGG 58.434 52.381 0.00 0.00 0.00 4.00
146 147 2.092914 GCTAGAGGTGCAGTAAATGGGT 60.093 50.000 0.00 0.00 0.00 4.51
147 148 3.622455 GCTAGAGGTGCAGTAAATGGGTT 60.622 47.826 0.00 0.00 0.00 4.11
148 149 2.795329 AGAGGTGCAGTAAATGGGTTG 58.205 47.619 0.00 0.00 0.00 3.77
149 150 1.818674 GAGGTGCAGTAAATGGGTTGG 59.181 52.381 0.00 0.00 0.00 3.77
150 151 1.146982 AGGTGCAGTAAATGGGTTGGT 59.853 47.619 0.00 0.00 0.00 3.67
151 152 1.544246 GGTGCAGTAAATGGGTTGGTC 59.456 52.381 0.00 0.00 0.00 4.02
152 153 1.544246 GTGCAGTAAATGGGTTGGTCC 59.456 52.381 0.00 0.00 0.00 4.46
153 154 1.145945 TGCAGTAAATGGGTTGGTCCA 59.854 47.619 0.00 0.00 41.60 4.02
154 155 2.243810 GCAGTAAATGGGTTGGTCCAA 58.756 47.619 0.00 0.00 40.62 3.53
155 156 2.831526 GCAGTAAATGGGTTGGTCCAAT 59.168 45.455 7.77 0.00 40.62 3.16
156 157 3.119137 GCAGTAAATGGGTTGGTCCAATC 60.119 47.826 7.77 7.00 40.62 2.67
157 158 3.128589 CAGTAAATGGGTTGGTCCAATCG 59.871 47.826 7.77 0.00 40.62 3.34
158 159 2.302587 AAATGGGTTGGTCCAATCGT 57.697 45.000 7.77 2.38 40.62 3.73
159 160 1.544724 AATGGGTTGGTCCAATCGTG 58.455 50.000 7.77 0.00 40.62 4.35
160 161 0.695924 ATGGGTTGGTCCAATCGTGA 59.304 50.000 7.77 0.00 40.62 4.35
161 162 0.695924 TGGGTTGGTCCAATCGTGAT 59.304 50.000 7.77 0.00 38.11 3.06
162 163 1.074727 TGGGTTGGTCCAATCGTGATT 59.925 47.619 7.77 0.00 38.11 2.57
163 164 2.167662 GGGTTGGTCCAATCGTGATTT 58.832 47.619 7.77 0.00 38.11 2.17
164 165 2.094752 GGGTTGGTCCAATCGTGATTTG 60.095 50.000 7.77 0.00 38.11 2.32
165 166 2.595386 GTTGGTCCAATCGTGATTTGC 58.405 47.619 7.77 0.00 0.00 3.68
166 167 1.173043 TGGTCCAATCGTGATTTGCC 58.827 50.000 0.00 0.00 0.00 4.52
167 168 0.098728 GGTCCAATCGTGATTTGCCG 59.901 55.000 0.00 0.00 0.00 5.69
168 169 0.802494 GTCCAATCGTGATTTGCCGT 59.198 50.000 0.00 0.00 0.00 5.68
169 170 0.801872 TCCAATCGTGATTTGCCGTG 59.198 50.000 0.00 0.00 0.00 4.94
170 171 0.179166 CCAATCGTGATTTGCCGTGG 60.179 55.000 0.00 0.00 0.00 4.94
171 172 0.801872 CAATCGTGATTTGCCGTGGA 59.198 50.000 0.00 0.00 0.00 4.02
172 173 1.401552 CAATCGTGATTTGCCGTGGAT 59.598 47.619 0.00 0.00 0.00 3.41
173 174 1.016627 ATCGTGATTTGCCGTGGATG 58.983 50.000 0.00 0.00 0.00 3.51
174 175 1.024046 TCGTGATTTGCCGTGGATGG 61.024 55.000 0.00 0.00 0.00 3.51
175 176 1.024046 CGTGATTTGCCGTGGATGGA 61.024 55.000 0.00 0.00 0.00 3.41
176 177 0.734889 GTGATTTGCCGTGGATGGAG 59.265 55.000 0.00 0.00 0.00 3.86
177 178 0.394216 TGATTTGCCGTGGATGGAGG 60.394 55.000 0.00 0.00 0.00 4.30
178 179 0.394352 GATTTGCCGTGGATGGAGGT 60.394 55.000 0.00 0.00 0.00 3.85
179 180 0.394352 ATTTGCCGTGGATGGAGGTC 60.394 55.000 0.00 0.00 0.00 3.85
180 181 2.478335 TTTGCCGTGGATGGAGGTCC 62.478 60.000 0.00 0.00 38.81 4.46
181 182 4.176752 GCCGTGGATGGAGGTCCC 62.177 72.222 0.00 0.00 37.48 4.46
182 183 2.365635 CCGTGGATGGAGGTCCCT 60.366 66.667 0.00 0.00 37.48 4.20
183 184 1.075525 CCGTGGATGGAGGTCCCTA 60.076 63.158 0.00 0.00 37.48 3.53
184 185 0.471971 CCGTGGATGGAGGTCCCTAT 60.472 60.000 0.00 0.00 37.48 2.57
185 186 1.424638 CGTGGATGGAGGTCCCTATT 58.575 55.000 0.00 0.00 37.48 1.73
186 187 1.070758 CGTGGATGGAGGTCCCTATTG 59.929 57.143 0.00 0.00 37.48 1.90
187 188 1.421646 GTGGATGGAGGTCCCTATTGG 59.578 57.143 0.00 0.00 37.48 3.16
188 189 1.296832 TGGATGGAGGTCCCTATTGGA 59.703 52.381 0.00 0.00 42.41 3.53
196 197 3.300032 TCCCTATTGGACGCTGAGT 57.700 52.632 0.00 0.00 38.61 3.41
197 198 0.824109 TCCCTATTGGACGCTGAGTG 59.176 55.000 0.00 0.00 38.61 3.51
198 199 0.811616 CCCTATTGGACGCTGAGTGC 60.812 60.000 0.00 0.00 41.99 4.40
208 209 2.670635 GCTGAGTGCGTCACATAGG 58.329 57.895 11.58 2.04 36.74 2.57
209 210 0.173481 GCTGAGTGCGTCACATAGGA 59.827 55.000 11.58 0.00 36.74 2.94
210 211 1.914634 CTGAGTGCGTCACATAGGAC 58.085 55.000 11.58 0.00 36.74 3.85
211 212 0.530744 TGAGTGCGTCACATAGGACC 59.469 55.000 11.58 0.00 36.74 4.46
212 213 0.818296 GAGTGCGTCACATAGGACCT 59.182 55.000 0.00 0.00 36.74 3.85
213 214 0.818296 AGTGCGTCACATAGGACCTC 59.182 55.000 0.00 0.00 36.74 3.85
214 215 0.179108 GTGCGTCACATAGGACCTCC 60.179 60.000 0.00 0.00 34.24 4.30
215 216 1.327690 TGCGTCACATAGGACCTCCC 61.328 60.000 0.00 0.00 36.42 4.30
216 217 1.734137 CGTCACATAGGACCTCCCG 59.266 63.158 0.00 0.00 40.87 5.14
217 218 1.035932 CGTCACATAGGACCTCCCGT 61.036 60.000 0.00 0.00 40.87 5.28
218 219 1.192428 GTCACATAGGACCTCCCGTT 58.808 55.000 0.00 0.00 40.87 4.44
219 220 2.381911 GTCACATAGGACCTCCCGTTA 58.618 52.381 0.00 0.00 40.87 3.18
220 221 2.361438 GTCACATAGGACCTCCCGTTAG 59.639 54.545 0.00 0.00 40.87 2.34
221 222 1.068741 CACATAGGACCTCCCGTTAGC 59.931 57.143 0.00 0.00 40.87 3.09
222 223 1.063114 ACATAGGACCTCCCGTTAGCT 60.063 52.381 0.00 0.00 40.87 3.32
223 224 2.176364 ACATAGGACCTCCCGTTAGCTA 59.824 50.000 0.00 0.00 40.87 3.32
224 225 2.355010 TAGGACCTCCCGTTAGCTAC 57.645 55.000 0.00 0.00 40.87 3.58
225 226 0.630134 AGGACCTCCCGTTAGCTACT 59.370 55.000 0.00 0.00 40.87 2.57
226 227 1.006878 AGGACCTCCCGTTAGCTACTT 59.993 52.381 0.00 0.00 40.87 2.24
227 228 1.408340 GGACCTCCCGTTAGCTACTTC 59.592 57.143 0.00 0.00 0.00 3.01
228 229 1.065251 GACCTCCCGTTAGCTACTTCG 59.935 57.143 0.00 0.00 0.00 3.79
229 230 1.101331 CCTCCCGTTAGCTACTTCGT 58.899 55.000 0.00 0.00 0.00 3.85
230 231 1.202268 CCTCCCGTTAGCTACTTCGTG 60.202 57.143 0.00 0.00 0.00 4.35
231 232 1.471684 CTCCCGTTAGCTACTTCGTGT 59.528 52.381 0.00 0.00 0.00 4.49
232 233 1.200716 TCCCGTTAGCTACTTCGTGTG 59.799 52.381 0.00 0.00 0.00 3.82
233 234 1.068055 CCCGTTAGCTACTTCGTGTGT 60.068 52.381 0.00 0.00 0.00 3.72
234 235 1.983605 CCGTTAGCTACTTCGTGTGTG 59.016 52.381 0.00 0.00 0.00 3.82
235 236 1.983605 CGTTAGCTACTTCGTGTGTGG 59.016 52.381 0.00 0.00 0.00 4.17
236 237 2.334838 GTTAGCTACTTCGTGTGTGGG 58.665 52.381 0.00 0.00 0.00 4.61
237 238 0.245539 TAGCTACTTCGTGTGTGGGC 59.754 55.000 0.00 0.00 0.00 5.36
238 239 1.004918 GCTACTTCGTGTGTGGGCT 60.005 57.895 0.00 0.00 0.00 5.19
239 240 1.291877 GCTACTTCGTGTGTGGGCTG 61.292 60.000 0.00 0.00 0.00 4.85
240 241 1.291877 CTACTTCGTGTGTGGGCTGC 61.292 60.000 0.00 0.00 0.00 5.25
241 242 2.725203 TACTTCGTGTGTGGGCTGCC 62.725 60.000 11.05 11.05 0.00 4.85
242 243 3.832237 CTTCGTGTGTGGGCTGCCT 62.832 63.158 19.68 0.00 0.00 4.75
243 244 4.624364 TCGTGTGTGGGCTGCCTG 62.624 66.667 19.68 0.45 0.00 4.85
245 246 4.962836 GTGTGTGGGCTGCCTGCT 62.963 66.667 19.68 0.00 42.39 4.24
246 247 4.960866 TGTGTGGGCTGCCTGCTG 62.961 66.667 19.68 0.00 42.39 4.41
247 248 4.648626 GTGTGGGCTGCCTGCTGA 62.649 66.667 19.68 0.00 42.39 4.26
248 249 4.648626 TGTGGGCTGCCTGCTGAC 62.649 66.667 19.68 8.28 42.39 3.51
249 250 4.341783 GTGGGCTGCCTGCTGACT 62.342 66.667 19.68 0.00 42.39 3.41
250 251 4.340246 TGGGCTGCCTGCTGACTG 62.340 66.667 19.68 0.00 42.39 3.51
251 252 4.025858 GGGCTGCCTGCTGACTGA 62.026 66.667 19.68 0.00 42.39 3.41
252 253 2.033141 GGCTGCCTGCTGACTGAA 59.967 61.111 12.43 0.00 42.39 3.02
253 254 1.601759 GGCTGCCTGCTGACTGAAA 60.602 57.895 12.43 0.00 42.39 2.69
254 255 1.578423 GCTGCCTGCTGACTGAAAC 59.422 57.895 0.00 0.00 38.95 2.78
255 256 1.168407 GCTGCCTGCTGACTGAAACA 61.168 55.000 0.00 0.00 38.95 2.83
256 257 1.531423 CTGCCTGCTGACTGAAACAT 58.469 50.000 0.00 0.00 0.00 2.71
257 258 2.703416 CTGCCTGCTGACTGAAACATA 58.297 47.619 0.00 0.00 0.00 2.29
258 259 3.076621 CTGCCTGCTGACTGAAACATAA 58.923 45.455 0.00 0.00 0.00 1.90
259 260 3.689347 TGCCTGCTGACTGAAACATAAT 58.311 40.909 0.00 0.00 0.00 1.28
260 261 3.441222 TGCCTGCTGACTGAAACATAATG 59.559 43.478 0.00 0.00 0.00 1.90
261 262 3.441572 GCCTGCTGACTGAAACATAATGT 59.558 43.478 0.00 0.00 0.00 2.71
262 263 4.082571 GCCTGCTGACTGAAACATAATGTT 60.083 41.667 0.00 0.00 43.41 2.71
263 264 5.123820 GCCTGCTGACTGAAACATAATGTTA 59.876 40.000 0.00 0.00 40.14 2.41
264 265 6.676456 GCCTGCTGACTGAAACATAATGTTAG 60.676 42.308 0.00 0.00 40.14 2.34
265 266 6.182039 TGCTGACTGAAACATAATGTTAGC 57.818 37.500 0.00 0.00 40.14 3.09
266 267 5.123820 TGCTGACTGAAACATAATGTTAGCC 59.876 40.000 0.00 0.00 40.14 3.93
267 268 5.355350 GCTGACTGAAACATAATGTTAGCCT 59.645 40.000 0.00 0.00 40.14 4.58
268 269 6.538742 GCTGACTGAAACATAATGTTAGCCTA 59.461 38.462 0.00 0.00 40.14 3.93
269 270 7.466050 GCTGACTGAAACATAATGTTAGCCTAC 60.466 40.741 0.00 0.00 40.14 3.18
270 271 6.821665 TGACTGAAACATAATGTTAGCCTACC 59.178 38.462 0.00 0.00 40.14 3.18
271 272 6.958767 ACTGAAACATAATGTTAGCCTACCT 58.041 36.000 0.00 0.00 40.14 3.08
272 273 7.402862 ACTGAAACATAATGTTAGCCTACCTT 58.597 34.615 0.00 0.00 40.14 3.50
273 274 7.888546 ACTGAAACATAATGTTAGCCTACCTTT 59.111 33.333 0.00 0.00 40.14 3.11
274 275 8.644374 TGAAACATAATGTTAGCCTACCTTTT 57.356 30.769 0.00 0.00 40.14 2.27
275 276 8.736244 TGAAACATAATGTTAGCCTACCTTTTC 58.264 33.333 0.00 0.00 40.14 2.29
276 277 7.640597 AACATAATGTTAGCCTACCTTTTCC 57.359 36.000 0.00 0.00 39.09 3.13
277 278 6.727394 ACATAATGTTAGCCTACCTTTTCCA 58.273 36.000 0.00 0.00 0.00 3.53
278 279 7.354312 ACATAATGTTAGCCTACCTTTTCCAT 58.646 34.615 0.00 0.00 0.00 3.41
279 280 7.502561 ACATAATGTTAGCCTACCTTTTCCATC 59.497 37.037 0.00 0.00 0.00 3.51
280 281 4.230745 TGTTAGCCTACCTTTTCCATCC 57.769 45.455 0.00 0.00 0.00 3.51
281 282 3.053917 TGTTAGCCTACCTTTTCCATCCC 60.054 47.826 0.00 0.00 0.00 3.85
282 283 1.987080 AGCCTACCTTTTCCATCCCT 58.013 50.000 0.00 0.00 0.00 4.20
283 284 1.566231 AGCCTACCTTTTCCATCCCTG 59.434 52.381 0.00 0.00 0.00 4.45
284 285 1.564348 GCCTACCTTTTCCATCCCTGA 59.436 52.381 0.00 0.00 0.00 3.86
285 286 2.175715 GCCTACCTTTTCCATCCCTGAT 59.824 50.000 0.00 0.00 0.00 2.90
286 287 3.825328 CCTACCTTTTCCATCCCTGATG 58.175 50.000 0.00 0.00 39.52 3.07
287 288 3.459598 CCTACCTTTTCCATCCCTGATGA 59.540 47.826 5.67 0.00 42.09 2.92
288 289 3.659183 ACCTTTTCCATCCCTGATGAG 57.341 47.619 5.67 0.00 42.09 2.90
289 290 2.305009 CCTTTTCCATCCCTGATGAGC 58.695 52.381 5.67 0.00 42.09 4.26
290 291 2.305009 CTTTTCCATCCCTGATGAGCC 58.695 52.381 5.67 0.00 42.09 4.70
291 292 1.297968 TTTCCATCCCTGATGAGCCA 58.702 50.000 5.67 0.00 42.09 4.75
292 293 1.526315 TTCCATCCCTGATGAGCCAT 58.474 50.000 5.67 0.00 42.09 4.40
293 294 1.526315 TCCATCCCTGATGAGCCATT 58.474 50.000 5.67 0.00 42.09 3.16
294 295 1.144298 TCCATCCCTGATGAGCCATTG 59.856 52.381 5.67 0.00 42.09 2.82
295 296 1.617322 CATCCCTGATGAGCCATTGG 58.383 55.000 0.00 0.00 42.09 3.16
296 297 2.429716 CATCCCTGATGAGCCATTGGC 61.430 57.143 20.38 20.38 42.09 4.52
301 302 0.757561 TGATGAGCCATTGGCCCATG 60.758 55.000 27.18 9.90 46.91 3.66
302 303 1.469335 GATGAGCCATTGGCCCATGG 61.469 60.000 27.18 27.96 46.91 3.66
303 304 3.836530 GATGAGCCATTGGCCCATGGA 62.837 57.143 34.50 17.56 46.91 3.41
305 306 2.042639 GCCATTGGCCCATGGACT 60.043 61.111 34.50 0.00 44.06 3.85
306 307 1.229927 GCCATTGGCCCATGGACTA 59.770 57.895 34.50 0.00 44.06 2.59
307 308 1.109323 GCCATTGGCCCATGGACTAC 61.109 60.000 34.50 16.13 44.06 2.73
308 309 0.468029 CCATTGGCCCATGGACTACC 60.468 60.000 28.28 9.68 40.30 3.18
309 310 0.552848 CATTGGCCCATGGACTACCT 59.447 55.000 15.22 0.00 37.04 3.08
310 311 0.552848 ATTGGCCCATGGACTACCTG 59.447 55.000 15.22 0.00 37.04 4.00
311 312 0.844661 TTGGCCCATGGACTACCTGT 60.845 55.000 15.22 0.00 37.04 4.00
312 313 1.224592 GGCCCATGGACTACCTGTG 59.775 63.158 15.22 0.00 37.04 3.66
313 314 1.271840 GGCCCATGGACTACCTGTGA 61.272 60.000 15.22 0.00 37.04 3.58
314 315 0.618458 GCCCATGGACTACCTGTGAA 59.382 55.000 15.22 0.00 37.04 3.18
315 316 1.679032 GCCCATGGACTACCTGTGAAC 60.679 57.143 15.22 0.00 37.04 3.18
316 317 1.065418 CCCATGGACTACCTGTGAACC 60.065 57.143 15.22 0.00 37.04 3.62
317 318 1.065418 CCATGGACTACCTGTGAACCC 60.065 57.143 5.56 0.00 37.04 4.11
318 319 1.909302 CATGGACTACCTGTGAACCCT 59.091 52.381 0.00 0.00 37.04 4.34
319 320 1.348064 TGGACTACCTGTGAACCCTG 58.652 55.000 0.00 0.00 37.04 4.45
320 321 0.613777 GGACTACCTGTGAACCCTGG 59.386 60.000 0.00 0.00 0.00 4.45
321 322 0.613777 GACTACCTGTGAACCCTGGG 59.386 60.000 12.28 12.28 0.00 4.45
322 323 0.104620 ACTACCTGTGAACCCTGGGT 60.105 55.000 14.05 14.05 37.65 4.51
323 324 0.324943 CTACCTGTGAACCCTGGGTG 59.675 60.000 21.38 8.20 35.34 4.61
324 325 1.131303 TACCTGTGAACCCTGGGTGG 61.131 60.000 21.38 18.03 35.34 4.61
333 334 4.764771 CCTGGGTGGGGCATGTGG 62.765 72.222 0.00 0.00 0.00 4.17
334 335 3.983420 CTGGGTGGGGCATGTGGT 61.983 66.667 0.00 0.00 0.00 4.16
335 336 3.516512 TGGGTGGGGCATGTGGTT 61.517 61.111 0.00 0.00 0.00 3.67
336 337 2.203773 GGGTGGGGCATGTGGTTT 60.204 61.111 0.00 0.00 0.00 3.27
337 338 1.841103 GGGTGGGGCATGTGGTTTT 60.841 57.895 0.00 0.00 0.00 2.43
338 339 0.543174 GGGTGGGGCATGTGGTTTTA 60.543 55.000 0.00 0.00 0.00 1.52
339 340 0.894835 GGTGGGGCATGTGGTTTTAG 59.105 55.000 0.00 0.00 0.00 1.85
340 341 0.894835 GTGGGGCATGTGGTTTTAGG 59.105 55.000 0.00 0.00 0.00 2.69
341 342 0.780637 TGGGGCATGTGGTTTTAGGA 59.219 50.000 0.00 0.00 0.00 2.94
342 343 1.272425 TGGGGCATGTGGTTTTAGGAG 60.272 52.381 0.00 0.00 0.00 3.69
343 344 0.817654 GGGCATGTGGTTTTAGGAGC 59.182 55.000 0.00 0.00 0.00 4.70
344 345 1.616994 GGGCATGTGGTTTTAGGAGCT 60.617 52.381 0.00 0.00 0.00 4.09
345 346 2.171003 GGCATGTGGTTTTAGGAGCTT 58.829 47.619 0.00 0.00 0.00 3.74
346 347 2.094545 GGCATGTGGTTTTAGGAGCTTG 60.095 50.000 0.00 0.00 0.00 4.01
347 348 2.094545 GCATGTGGTTTTAGGAGCTTGG 60.095 50.000 0.00 0.00 0.00 3.61
348 349 2.286365 TGTGGTTTTAGGAGCTTGGG 57.714 50.000 0.00 0.00 0.00 4.12
349 350 1.777878 TGTGGTTTTAGGAGCTTGGGA 59.222 47.619 0.00 0.00 0.00 4.37
350 351 2.378547 TGTGGTTTTAGGAGCTTGGGAT 59.621 45.455 0.00 0.00 0.00 3.85
351 352 2.755103 GTGGTTTTAGGAGCTTGGGATG 59.245 50.000 0.00 0.00 0.00 3.51
352 353 2.291540 TGGTTTTAGGAGCTTGGGATGG 60.292 50.000 0.00 0.00 0.00 3.51
353 354 1.751351 GTTTTAGGAGCTTGGGATGGC 59.249 52.381 0.00 0.00 0.00 4.40
354 355 0.258774 TTTAGGAGCTTGGGATGGCC 59.741 55.000 0.00 0.00 0.00 5.36
355 356 1.983119 TTAGGAGCTTGGGATGGCCG 61.983 60.000 0.00 0.00 33.83 6.13
384 385 3.350163 CCTCCCCATGGGCCAGTT 61.350 66.667 26.87 0.00 43.94 3.16
385 386 2.276740 CTCCCCATGGGCCAGTTC 59.723 66.667 26.87 0.00 43.94 3.01
386 387 2.204291 TCCCCATGGGCCAGTTCT 60.204 61.111 26.87 0.00 43.94 3.01
387 388 0.988145 CTCCCCATGGGCCAGTTCTA 60.988 60.000 26.87 1.52 43.94 2.10
388 389 0.551377 TCCCCATGGGCCAGTTCTAA 60.551 55.000 26.87 0.00 43.94 2.10
389 390 0.557729 CCCCATGGGCCAGTTCTAAT 59.442 55.000 26.87 0.00 35.35 1.73
390 391 1.062962 CCCCATGGGCCAGTTCTAATT 60.063 52.381 26.87 0.00 35.35 1.40
391 392 2.310538 CCCATGGGCCAGTTCTAATTC 58.689 52.381 20.41 0.00 0.00 2.17
392 393 2.091665 CCCATGGGCCAGTTCTAATTCT 60.092 50.000 20.41 0.00 0.00 2.40
393 394 3.138283 CCCATGGGCCAGTTCTAATTCTA 59.862 47.826 20.41 0.00 0.00 2.10
394 395 4.386312 CCCATGGGCCAGTTCTAATTCTAA 60.386 45.833 20.41 0.00 0.00 2.10
395 396 5.200483 CCATGGGCCAGTTCTAATTCTAAA 58.800 41.667 13.78 0.00 0.00 1.85
396 397 5.067805 CCATGGGCCAGTTCTAATTCTAAAC 59.932 44.000 13.78 0.00 0.00 2.01
397 398 5.249780 TGGGCCAGTTCTAATTCTAAACA 57.750 39.130 0.00 0.00 0.00 2.83
398 399 5.826643 TGGGCCAGTTCTAATTCTAAACAT 58.173 37.500 0.00 0.00 0.00 2.71
399 400 6.252995 TGGGCCAGTTCTAATTCTAAACATT 58.747 36.000 0.00 0.00 0.00 2.71
400 401 6.377146 TGGGCCAGTTCTAATTCTAAACATTC 59.623 38.462 0.00 0.00 0.00 2.67
401 402 6.377146 GGGCCAGTTCTAATTCTAAACATTCA 59.623 38.462 4.39 0.00 0.00 2.57
402 403 7.251281 GGCCAGTTCTAATTCTAAACATTCAC 58.749 38.462 0.00 0.00 0.00 3.18
403 404 7.121315 GGCCAGTTCTAATTCTAAACATTCACT 59.879 37.037 0.00 0.00 0.00 3.41
404 405 9.162764 GCCAGTTCTAATTCTAAACATTCACTA 57.837 33.333 0.00 0.00 0.00 2.74
407 408 8.870879 AGTTCTAATTCTAAACATTCACTACGC 58.129 33.333 0.00 0.00 0.00 4.42
408 409 8.870879 GTTCTAATTCTAAACATTCACTACGCT 58.129 33.333 0.00 0.00 0.00 5.07
409 410 8.997621 TCTAATTCTAAACATTCACTACGCTT 57.002 30.769 0.00 0.00 0.00 4.68
410 411 9.431887 TCTAATTCTAAACATTCACTACGCTTT 57.568 29.630 0.00 0.00 0.00 3.51
411 412 9.690434 CTAATTCTAAACATTCACTACGCTTTC 57.310 33.333 0.00 0.00 0.00 2.62
412 413 7.667043 ATTCTAAACATTCACTACGCTTTCA 57.333 32.000 0.00 0.00 0.00 2.69
413 414 6.706055 TCTAAACATTCACTACGCTTTCAG 57.294 37.500 0.00 0.00 0.00 3.02
414 415 3.813529 AACATTCACTACGCTTTCAGC 57.186 42.857 0.00 0.00 38.02 4.26
423 424 4.617875 GCTTTCAGCGGCCTAGAA 57.382 55.556 0.00 0.00 0.00 2.10
424 425 2.854522 GCTTTCAGCGGCCTAGAAA 58.145 52.632 0.00 7.53 0.00 2.52
425 426 1.165270 GCTTTCAGCGGCCTAGAAAA 58.835 50.000 0.00 0.00 31.59 2.29
426 427 1.135660 GCTTTCAGCGGCCTAGAAAAC 60.136 52.381 0.00 0.21 31.59 2.43
427 428 2.151202 CTTTCAGCGGCCTAGAAAACA 58.849 47.619 0.00 0.00 31.59 2.83
428 429 2.489938 TTCAGCGGCCTAGAAAACAT 57.510 45.000 0.00 0.00 0.00 2.71
429 430 3.620427 TTCAGCGGCCTAGAAAACATA 57.380 42.857 0.00 0.00 0.00 2.29
430 431 3.620427 TCAGCGGCCTAGAAAACATAA 57.380 42.857 0.00 0.00 0.00 1.90
431 432 3.267483 TCAGCGGCCTAGAAAACATAAC 58.733 45.455 0.00 0.00 0.00 1.89
432 433 3.055385 TCAGCGGCCTAGAAAACATAACT 60.055 43.478 0.00 0.00 0.00 2.24
433 434 4.160814 TCAGCGGCCTAGAAAACATAACTA 59.839 41.667 0.00 0.00 0.00 2.24
434 435 5.057149 CAGCGGCCTAGAAAACATAACTAT 58.943 41.667 0.00 0.00 0.00 2.12
435 436 5.527582 CAGCGGCCTAGAAAACATAACTATT 59.472 40.000 0.00 0.00 0.00 1.73
436 437 6.704493 CAGCGGCCTAGAAAACATAACTATTA 59.296 38.462 0.00 0.00 0.00 0.98
437 438 7.387948 CAGCGGCCTAGAAAACATAACTATTAT 59.612 37.037 0.00 0.00 0.00 1.28
438 439 7.937394 AGCGGCCTAGAAAACATAACTATTATT 59.063 33.333 0.00 0.00 0.00 1.40
439 440 8.565416 GCGGCCTAGAAAACATAACTATTATTT 58.435 33.333 0.00 0.00 0.00 1.40
464 465 9.762381 TTTTTCTGTCCCATAATATAAAGGTGT 57.238 29.630 0.00 0.00 0.00 4.16
465 466 9.762381 TTTTCTGTCCCATAATATAAAGGTGTT 57.238 29.630 0.00 0.00 0.00 3.32
466 467 9.762381 TTTCTGTCCCATAATATAAAGGTGTTT 57.238 29.630 0.00 0.00 0.00 2.83
467 468 9.762381 TTCTGTCCCATAATATAAAGGTGTTTT 57.238 29.630 0.00 0.00 0.00 2.43
468 469 9.762381 TCTGTCCCATAATATAAAGGTGTTTTT 57.238 29.630 0.00 0.00 0.00 1.94
494 495 9.601971 TTAATTAATGTAGTGTCAAAAACGCTC 57.398 29.630 0.00 0.00 45.69 5.03
495 496 4.483476 AATGTAGTGTCAAAAACGCTCC 57.517 40.909 0.00 0.00 45.69 4.70
496 497 3.188159 TGTAGTGTCAAAAACGCTCCT 57.812 42.857 0.00 0.00 45.69 3.69
497 498 2.869801 TGTAGTGTCAAAAACGCTCCTG 59.130 45.455 0.00 0.00 45.69 3.86
498 499 1.308998 AGTGTCAAAAACGCTCCTGG 58.691 50.000 0.00 0.00 45.69 4.45
499 500 1.021968 GTGTCAAAAACGCTCCTGGT 58.978 50.000 0.00 0.00 35.42 4.00
500 501 1.002792 GTGTCAAAAACGCTCCTGGTC 60.003 52.381 0.00 0.00 35.42 4.02
501 502 0.591659 GTCAAAAACGCTCCTGGTCC 59.408 55.000 0.00 0.00 0.00 4.46
502 503 0.882927 TCAAAAACGCTCCTGGTCCG 60.883 55.000 7.09 7.09 0.00 4.79
503 504 1.599797 AAAAACGCTCCTGGTCCGG 60.600 57.895 0.00 0.00 0.00 5.14
504 505 2.047213 AAAAACGCTCCTGGTCCGGA 62.047 55.000 0.00 0.00 0.00 5.14
518 519 4.561452 CGGAGTCGGAGATGAGGA 57.439 61.111 0.00 0.00 40.67 3.71
519 520 2.326222 CGGAGTCGGAGATGAGGAG 58.674 63.158 0.00 0.00 40.67 3.69
520 521 0.179043 CGGAGTCGGAGATGAGGAGA 60.179 60.000 0.00 0.00 40.67 3.71
521 522 1.747552 CGGAGTCGGAGATGAGGAGAA 60.748 57.143 0.00 0.00 40.67 2.87
522 523 2.379972 GGAGTCGGAGATGAGGAGAAA 58.620 52.381 0.00 0.00 40.67 2.52
523 524 2.761208 GGAGTCGGAGATGAGGAGAAAA 59.239 50.000 0.00 0.00 40.67 2.29
524 525 3.429684 GGAGTCGGAGATGAGGAGAAAAC 60.430 52.174 0.00 0.00 40.67 2.43
525 526 2.498078 AGTCGGAGATGAGGAGAAAACC 59.502 50.000 0.00 0.00 40.67 3.27
526 527 2.233922 GTCGGAGATGAGGAGAAAACCA 59.766 50.000 0.00 0.00 40.67 3.67
527 528 2.233922 TCGGAGATGAGGAGAAAACCAC 59.766 50.000 0.00 0.00 0.00 4.16
528 529 2.678190 CGGAGATGAGGAGAAAACCACC 60.678 54.545 0.00 0.00 0.00 4.61
529 530 2.305927 GGAGATGAGGAGAAAACCACCA 59.694 50.000 0.00 0.00 0.00 4.17
530 531 3.604582 GAGATGAGGAGAAAACCACCAG 58.395 50.000 0.00 0.00 0.00 4.00
531 532 2.307098 AGATGAGGAGAAAACCACCAGG 59.693 50.000 0.00 0.00 42.21 4.45
552 553 2.935955 GGCGTTGGAACTGACACG 59.064 61.111 0.00 0.00 0.00 4.49
581 584 2.259618 CGTGAAGATGTACAAGGACGG 58.740 52.381 0.00 0.00 0.00 4.79
864 888 2.670592 TTCTCGCTCCGTCCGTCA 60.671 61.111 0.00 0.00 0.00 4.35
889 915 0.257616 CTCCCCTTCTCTCTCTCCGT 59.742 60.000 0.00 0.00 0.00 4.69
1071 1097 3.592814 CTCGCCTCCGTCGCCATA 61.593 66.667 0.00 0.00 35.54 2.74
1164 1190 4.530857 GAGCCCGTCACCATCCCG 62.531 72.222 0.00 0.00 0.00 5.14
1188 1214 2.183046 GAGCACTCCTCCTCGCAC 59.817 66.667 0.00 0.00 34.35 5.34
1772 1798 7.628366 GCCCGAGAATTTCTTGTTCATCAATAA 60.628 37.037 11.81 0.00 35.35 1.40
1827 1853 1.556911 GGGCTCTCCATCTTCTTCACA 59.443 52.381 0.00 0.00 35.00 3.58
1836 1862 5.277250 TCCATCTTCTTCACACCAGGTATA 58.723 41.667 0.00 0.00 0.00 1.47
1837 1863 5.905331 TCCATCTTCTTCACACCAGGTATAT 59.095 40.000 0.00 0.00 0.00 0.86
1838 1864 7.073208 TCCATCTTCTTCACACCAGGTATATA 58.927 38.462 0.00 0.00 0.00 0.86
1839 1865 7.734865 TCCATCTTCTTCACACCAGGTATATAT 59.265 37.037 0.00 0.00 0.00 0.86
1841 1867 7.303182 TCTTCTTCACACCAGGTATATATGG 57.697 40.000 0.00 1.45 42.60 2.74
1843 1869 4.286032 TCTTCACACCAGGTATATATGGCC 59.714 45.833 0.00 0.00 40.45 5.36
1844 1870 2.565391 TCACACCAGGTATATATGGCCG 59.435 50.000 0.00 0.00 40.45 6.13
1845 1871 1.278127 ACACCAGGTATATATGGCCGC 59.722 52.381 0.00 0.00 40.45 6.53
1846 1872 0.909623 ACCAGGTATATATGGCCGCC 59.090 55.000 1.04 1.04 40.45 6.13
1847 1873 1.204146 CCAGGTATATATGGCCGCCT 58.796 55.000 11.61 0.00 0.00 5.52
1848 1874 1.559682 CCAGGTATATATGGCCGCCTT 59.440 52.381 11.61 7.04 0.00 4.35
1849 1875 2.026262 CCAGGTATATATGGCCGCCTTT 60.026 50.000 11.61 0.55 0.00 3.11
1861 1890 2.035832 GGCCGCCTTTATAATGCAATGT 59.964 45.455 0.71 0.00 0.00 2.71
1864 1893 5.469479 GCCGCCTTTATAATGCAATGTAAT 58.531 37.500 0.00 0.00 0.00 1.89
1877 1906 6.513806 TGCAATGTAATGCTGTGTATTTCT 57.486 33.333 0.67 0.00 46.54 2.52
1880 1909 6.195244 GCAATGTAATGCTGTGTATTTCTTCG 59.805 38.462 0.00 0.00 43.06 3.79
1881 1910 6.985188 ATGTAATGCTGTGTATTTCTTCGT 57.015 33.333 0.00 0.00 0.00 3.85
1882 1911 6.164408 TGTAATGCTGTGTATTTCTTCGTG 57.836 37.500 0.00 0.00 0.00 4.35
1883 1912 5.929415 TGTAATGCTGTGTATTTCTTCGTGA 59.071 36.000 0.00 0.00 0.00 4.35
1884 1913 6.593770 TGTAATGCTGTGTATTTCTTCGTGAT 59.406 34.615 0.00 0.00 0.00 3.06
1950 1987 6.509418 ACAATTGATTTAGCGTAATGTGGT 57.491 33.333 13.59 0.00 0.00 4.16
1995 2032 2.279741 GCAAACATCGGCTCTGTATCA 58.720 47.619 0.00 0.00 0.00 2.15
2000 2037 6.619446 GCAAACATCGGCTCTGTATCATAATC 60.619 42.308 0.00 0.00 0.00 1.75
2006 2043 4.090642 CGGCTCTGTATCATAATCGAAAGC 59.909 45.833 0.00 0.00 0.00 3.51
2019 2056 9.119418 TCATAATCGAAAGCTAAAATGGATGAA 57.881 29.630 0.00 0.00 0.00 2.57
2030 2067 1.868713 ATGGATGAAATGCTTGGCCA 58.131 45.000 0.00 0.00 34.76 5.36
2037 2074 2.224018 TGAAATGCTTGGCCACTTGTTC 60.224 45.455 3.88 6.68 0.00 3.18
2048 2085 0.602638 CACTTGTTCTGCACGGGCTA 60.603 55.000 12.74 0.00 41.91 3.93
2062 2099 1.103398 GGGCTATCATTGCTGCCGTT 61.103 55.000 0.00 0.00 45.75 4.44
2063 2100 1.593196 GGCTATCATTGCTGCCGTTA 58.407 50.000 0.00 0.00 35.79 3.18
2126 2167 4.830600 TCTTCTGCCGGTTCCTTTAAAAAT 59.169 37.500 1.90 0.00 0.00 1.82
2267 2322 3.696281 TCACTGCACAACTGACAATTG 57.304 42.857 3.24 3.24 0.00 2.32
2281 2339 3.752222 TGACAATTGGCATTCATTTTGGC 59.248 39.130 10.79 0.00 39.89 4.52
2299 2357 5.435686 TTGGCAGTACAGTCCAATTCTAT 57.564 39.130 9.13 0.00 35.17 1.98
2457 2518 7.454260 AGACAACCTGATTAGGATGAAAAAC 57.546 36.000 19.06 6.30 46.71 2.43
2485 2546 3.254166 TGATTGCCAGTTTCTTTCTGAGC 59.746 43.478 0.00 0.00 35.20 4.26
2553 2614 4.438148 GCTTTTCTTAGAGACAGGGCTAG 58.562 47.826 0.00 0.00 0.00 3.42
2554 2615 4.081365 GCTTTTCTTAGAGACAGGGCTAGT 60.081 45.833 0.00 0.00 0.00 2.57
2555 2616 5.127356 GCTTTTCTTAGAGACAGGGCTAGTA 59.873 44.000 0.00 0.00 0.00 1.82
2567 2628 7.172342 AGACAGGGCTAGTACTAGATATGAAG 58.828 42.308 30.09 15.33 35.21 3.02
2568 2629 6.854578 ACAGGGCTAGTACTAGATATGAAGT 58.145 40.000 30.09 15.87 35.21 3.01
2574 2635 7.364200 GCTAGTACTAGATATGAAGTGTGTGG 58.636 42.308 30.09 2.23 35.21 4.17
2575 2636 7.013464 GCTAGTACTAGATATGAAGTGTGTGGT 59.987 40.741 30.09 0.00 35.21 4.16
2576 2637 9.557061 CTAGTACTAGATATGAAGTGTGTGGTA 57.443 37.037 23.20 0.00 35.21 3.25
2577 2638 8.223177 AGTACTAGATATGAAGTGTGTGGTAC 57.777 38.462 0.00 0.00 32.28 3.34
2578 2639 8.053963 AGTACTAGATATGAAGTGTGTGGTACT 58.946 37.037 0.00 0.00 35.71 2.73
2579 2640 7.336161 ACTAGATATGAAGTGTGTGGTACTC 57.664 40.000 0.00 0.00 0.00 2.59
2580 2641 5.599999 AGATATGAAGTGTGTGGTACTCC 57.400 43.478 0.00 0.00 0.00 3.85
2581 2642 4.406003 AGATATGAAGTGTGTGGTACTCCC 59.594 45.833 0.00 0.00 0.00 4.30
2582 2643 2.097110 TGAAGTGTGTGGTACTCCCT 57.903 50.000 0.00 0.00 0.00 4.20
2583 2644 1.968493 TGAAGTGTGTGGTACTCCCTC 59.032 52.381 0.00 0.00 0.00 4.30
2584 2645 2.249139 GAAGTGTGTGGTACTCCCTCT 58.751 52.381 0.00 0.00 0.00 3.69
2585 2646 1.633774 AGTGTGTGGTACTCCCTCTG 58.366 55.000 0.00 0.00 0.00 3.35
2586 2647 1.133136 AGTGTGTGGTACTCCCTCTGT 60.133 52.381 0.00 0.00 0.00 3.41
2587 2648 1.272769 GTGTGTGGTACTCCCTCTGTC 59.727 57.143 0.00 0.00 0.00 3.51
2588 2649 0.896226 GTGTGGTACTCCCTCTGTCC 59.104 60.000 0.00 0.00 0.00 4.02
2589 2650 0.252103 TGTGGTACTCCCTCTGTCCC 60.252 60.000 0.00 0.00 0.00 4.46
2590 2651 0.252103 GTGGTACTCCCTCTGTCCCA 60.252 60.000 0.00 0.00 0.00 4.37
2591 2652 0.716591 TGGTACTCCCTCTGTCCCAT 59.283 55.000 0.00 0.00 0.00 4.00
2592 2653 1.934480 TGGTACTCCCTCTGTCCCATA 59.066 52.381 0.00 0.00 0.00 2.74
2593 2654 2.316677 TGGTACTCCCTCTGTCCCATAA 59.683 50.000 0.00 0.00 0.00 1.90
2594 2655 3.051341 TGGTACTCCCTCTGTCCCATAAT 60.051 47.826 0.00 0.00 0.00 1.28
2595 2656 4.171243 TGGTACTCCCTCTGTCCCATAATA 59.829 45.833 0.00 0.00 0.00 0.98
2596 2657 5.162760 TGGTACTCCCTCTGTCCCATAATAT 60.163 44.000 0.00 0.00 0.00 1.28
2597 2658 6.047479 TGGTACTCCCTCTGTCCCATAATATA 59.953 42.308 0.00 0.00 0.00 0.86
2598 2659 6.958192 GGTACTCCCTCTGTCCCATAATATAA 59.042 42.308 0.00 0.00 0.00 0.98
2599 2660 7.124448 GGTACTCCCTCTGTCCCATAATATAAG 59.876 44.444 0.00 0.00 0.00 1.73
2600 2661 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
2601 2662 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
2602 2663 5.721960 TCCCTCTGTCCCATAATATAAGAGC 59.278 44.000 0.00 0.00 0.00 4.09
2603 2664 5.394663 CCCTCTGTCCCATAATATAAGAGCG 60.395 48.000 0.00 0.00 0.00 5.03
2604 2665 5.186021 CCTCTGTCCCATAATATAAGAGCGT 59.814 44.000 0.00 0.00 0.00 5.07
2605 2666 6.295349 CCTCTGTCCCATAATATAAGAGCGTT 60.295 42.308 0.00 0.00 0.00 4.84
2606 2667 7.062749 TCTGTCCCATAATATAAGAGCGTTT 57.937 36.000 0.00 0.00 0.00 3.60
2607 2668 7.506114 TCTGTCCCATAATATAAGAGCGTTTT 58.494 34.615 0.00 0.00 0.00 2.43
2608 2669 7.990886 TCTGTCCCATAATATAAGAGCGTTTTT 59.009 33.333 0.00 0.00 0.00 1.94
2609 2670 7.925993 TGTCCCATAATATAAGAGCGTTTTTG 58.074 34.615 0.00 0.00 0.00 2.44
2610 2671 7.012894 TGTCCCATAATATAAGAGCGTTTTTGG 59.987 37.037 0.00 0.00 0.00 3.28
2611 2672 6.016610 TCCCATAATATAAGAGCGTTTTTGGC 60.017 38.462 0.00 0.00 0.00 4.52
2612 2673 6.238897 CCCATAATATAAGAGCGTTTTTGGCA 60.239 38.462 0.00 0.00 0.00 4.92
2613 2674 6.636850 CCATAATATAAGAGCGTTTTTGGCAC 59.363 38.462 0.00 0.00 0.00 5.01
2614 2675 5.637006 AATATAAGAGCGTTTTTGGCACA 57.363 34.783 0.00 0.00 0.00 4.57
2627 2688 2.700722 TGGCACAAGTGTACTGTCAA 57.299 45.000 1.79 0.00 31.92 3.18
2628 2689 2.992593 TGGCACAAGTGTACTGTCAAA 58.007 42.857 1.79 0.00 31.92 2.69
2629 2690 3.348119 TGGCACAAGTGTACTGTCAAAA 58.652 40.909 1.79 0.00 31.92 2.44
2630 2691 3.759086 TGGCACAAGTGTACTGTCAAAAA 59.241 39.130 1.79 0.00 31.92 1.94
2652 2713 8.914328 AAAAACGTTTTTATATTATGGGACGG 57.086 30.769 31.82 0.00 38.50 4.79
2653 2714 7.862512 AAACGTTTTTATATTATGGGACGGA 57.137 32.000 7.96 0.00 33.95 4.69
2654 2715 7.486802 AACGTTTTTATATTATGGGACGGAG 57.513 36.000 0.00 0.00 33.95 4.63
2655 2716 5.993441 ACGTTTTTATATTATGGGACGGAGG 59.007 40.000 0.00 0.00 33.95 4.30
2656 2717 5.410439 CGTTTTTATATTATGGGACGGAGGG 59.590 44.000 0.00 0.00 0.00 4.30
2657 2718 6.536447 GTTTTTATATTATGGGACGGAGGGA 58.464 40.000 0.00 0.00 0.00 4.20
2738 2800 2.094026 TGTGCGATGATGCTCTTACACT 60.094 45.455 0.00 0.00 35.36 3.55
2761 2823 8.792633 CACTCTCTACCAAATTATTTCCAAACA 58.207 33.333 0.00 0.00 0.00 2.83
2948 3010 0.256177 GGGTTCCTCCATTCTGGGAC 59.744 60.000 0.00 0.00 38.32 4.46
3211 3273 1.846782 CACGAAGCGCTATGTGAGTAC 59.153 52.381 28.43 5.95 34.29 2.73
3399 3462 8.281893 CGGTTAAAACAATTTTCTGCAATGAAT 58.718 29.630 0.00 0.00 34.19 2.57
3599 3662 3.181451 ACAGCGGTCATATCACATTGGAT 60.181 43.478 0.00 0.00 0.00 3.41
3864 3929 4.724279 AATGCCTACATACCCCCTTTAG 57.276 45.455 0.00 0.00 34.62 1.85
3934 3999 1.034292 GGCCAAGAATCCTGTGCCTC 61.034 60.000 0.00 0.00 37.10 4.70
3969 4034 1.099879 GCAATGGCTACTCTGGCTGG 61.100 60.000 0.00 0.00 36.96 4.85
4202 4273 7.523293 TTTTGACTCTGCTCCAAATGAAATA 57.477 32.000 0.00 0.00 30.98 1.40
4236 4307 5.863965 TCATGAAAATGTCAGGCCGATATA 58.136 37.500 0.00 0.00 40.43 0.86
4239 4310 6.114187 TGAAAATGTCAGGCCGATATAGAT 57.886 37.500 0.00 0.00 0.00 1.98
4308 4379 6.149973 TGCATATGAACAAAGTTGAGAAGGAG 59.850 38.462 6.97 0.00 0.00 3.69
4389 4460 2.097825 GATGAGCTCCAAAAGGCATGT 58.902 47.619 12.15 0.00 0.00 3.21
4415 4486 2.714250 AGTTTGGTATTGGAGACACCCA 59.286 45.455 0.00 0.00 42.67 4.51
4651 4722 2.096218 GCACTGAAGCTTCGGTAAACTG 60.096 50.000 34.61 24.28 44.62 3.16
4687 4758 5.221541 GGGTGTCTTCCCTACTGATTGATAG 60.222 48.000 0.00 0.00 43.85 2.08
4816 7664 9.955102 ACAATCATATGACTGATAGCATAACAT 57.045 29.630 20.35 0.00 34.79 2.71
4832 7680 8.523915 AGCATAACATTCATCCAGTTATTTGA 57.476 30.769 0.00 0.00 36.58 2.69
4899 7747 6.000246 ACAAACCATGGGAAGACAAAATTT 58.000 33.333 18.09 0.00 0.00 1.82
5056 7904 6.111382 TCTGAATCCTGAACTATTGAGCTTG 58.889 40.000 0.00 0.00 0.00 4.01
5135 7983 8.232513 CTAAAACCATTTAAAACCTAGACGGTC 58.767 37.037 0.00 0.00 36.38 4.79
5168 8016 6.645003 GTGGTTTTGTATTTCAGCCTTTAAGG 59.355 38.462 6.64 6.64 38.80 2.69
5312 8163 2.844348 ACCTCGGAATATGAAACCACCT 59.156 45.455 0.00 0.00 0.00 4.00
5315 8166 4.384208 CCTCGGAATATGAAACCACCTTCT 60.384 45.833 0.00 0.00 0.00 2.85
5353 8205 9.369672 TGGTTATTTAGGGTAGTTTCACATTTT 57.630 29.630 0.00 0.00 0.00 1.82
5442 8363 6.892658 AAAAGTATGACACAAATAGGCACA 57.107 33.333 0.00 0.00 0.00 4.57
5498 8419 7.352719 AGCATTCTCTACGTCTGTTAAAAAG 57.647 36.000 0.00 0.00 0.00 2.27
5612 8533 2.880890 CAGGGTTCAAACTGGACTTGAG 59.119 50.000 0.00 0.00 34.41 3.02
5638 8559 6.187682 CCATAGTTCAGGGTTTAAAGTGGAT 58.812 40.000 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.152284 AGCCTTGGGTTACTATAGCAAC 57.848 45.455 7.24 7.24 0.00 4.17
1 2 4.102054 GGTAGCCTTGGGTTACTATAGCAA 59.898 45.833 0.00 0.00 38.99 3.91
2 3 3.644738 GGTAGCCTTGGGTTACTATAGCA 59.355 47.826 0.00 0.00 38.99 3.49
3 4 3.305881 CGGTAGCCTTGGGTTACTATAGC 60.306 52.174 0.00 0.00 38.99 2.97
4 5 3.893813 ACGGTAGCCTTGGGTTACTATAG 59.106 47.826 9.69 0.00 38.99 1.31
5 6 3.638160 CACGGTAGCCTTGGGTTACTATA 59.362 47.826 9.69 0.00 38.99 1.31
6 7 2.433239 CACGGTAGCCTTGGGTTACTAT 59.567 50.000 9.69 0.00 38.99 2.12
7 8 1.826720 CACGGTAGCCTTGGGTTACTA 59.173 52.381 9.69 0.00 38.99 1.82
8 9 0.611714 CACGGTAGCCTTGGGTTACT 59.388 55.000 9.69 0.00 38.99 2.24
9 10 0.322648 ACACGGTAGCCTTGGGTTAC 59.677 55.000 0.00 2.63 38.41 2.50
10 11 0.609662 GACACGGTAGCCTTGGGTTA 59.390 55.000 0.00 0.00 0.00 2.85
11 12 1.125711 AGACACGGTAGCCTTGGGTT 61.126 55.000 0.00 0.00 0.00 4.11
12 13 1.535687 AGACACGGTAGCCTTGGGT 60.536 57.895 0.00 0.00 0.00 4.51
13 14 1.079127 CAGACACGGTAGCCTTGGG 60.079 63.158 0.00 0.00 0.00 4.12
14 15 1.079127 CCAGACACGGTAGCCTTGG 60.079 63.158 0.00 0.00 0.00 3.61
15 16 0.034896 AACCAGACACGGTAGCCTTG 59.965 55.000 0.00 0.00 38.76 3.61
16 17 0.320697 GAACCAGACACGGTAGCCTT 59.679 55.000 0.00 0.00 38.76 4.35
17 18 1.874345 CGAACCAGACACGGTAGCCT 61.874 60.000 0.00 0.00 38.76 4.58
18 19 1.445582 CGAACCAGACACGGTAGCC 60.446 63.158 0.00 0.00 38.76 3.93
19 20 2.092882 GCGAACCAGACACGGTAGC 61.093 63.158 0.00 0.00 38.76 3.58
20 21 0.806868 TAGCGAACCAGACACGGTAG 59.193 55.000 0.00 0.00 38.76 3.18
21 22 0.523072 GTAGCGAACCAGACACGGTA 59.477 55.000 0.00 0.00 38.76 4.02
22 23 1.288127 GTAGCGAACCAGACACGGT 59.712 57.895 0.00 0.00 42.71 4.83
23 24 0.108804 ATGTAGCGAACCAGACACGG 60.109 55.000 0.00 0.00 0.00 4.94
24 25 1.269166 GATGTAGCGAACCAGACACG 58.731 55.000 0.00 0.00 0.00 4.49
25 26 1.269166 CGATGTAGCGAACCAGACAC 58.731 55.000 0.00 0.00 0.00 3.67
26 27 0.172578 CCGATGTAGCGAACCAGACA 59.827 55.000 0.00 0.00 0.00 3.41
27 28 0.527817 CCCGATGTAGCGAACCAGAC 60.528 60.000 0.00 0.00 0.00 3.51
28 29 1.672854 CCCCGATGTAGCGAACCAGA 61.673 60.000 0.00 0.00 0.00 3.86
29 30 1.227263 CCCCGATGTAGCGAACCAG 60.227 63.158 0.00 0.00 0.00 4.00
30 31 2.897207 CCCCGATGTAGCGAACCA 59.103 61.111 0.00 0.00 0.00 3.67
31 32 2.588034 GCCCCGATGTAGCGAACC 60.588 66.667 0.00 0.00 0.00 3.62
36 37 0.812412 TTTTAGCGCCCCGATGTAGC 60.812 55.000 2.29 0.00 0.00 3.58
37 38 1.531149 CATTTTAGCGCCCCGATGTAG 59.469 52.381 2.29 0.00 0.00 2.74
38 39 1.139256 TCATTTTAGCGCCCCGATGTA 59.861 47.619 2.29 0.00 0.00 2.29
39 40 0.107410 TCATTTTAGCGCCCCGATGT 60.107 50.000 2.29 0.00 0.00 3.06
40 41 1.021202 TTCATTTTAGCGCCCCGATG 58.979 50.000 2.29 4.32 0.00 3.84
41 42 1.021968 GTTCATTTTAGCGCCCCGAT 58.978 50.000 2.29 0.00 0.00 4.18
42 43 0.035820 AGTTCATTTTAGCGCCCCGA 60.036 50.000 2.29 0.00 0.00 5.14
43 44 0.098728 CAGTTCATTTTAGCGCCCCG 59.901 55.000 2.29 0.00 0.00 5.73
44 45 0.455815 CCAGTTCATTTTAGCGCCCC 59.544 55.000 2.29 0.00 0.00 5.80
45 46 1.459450 TCCAGTTCATTTTAGCGCCC 58.541 50.000 2.29 0.00 0.00 6.13
46 47 3.304057 GCTATCCAGTTCATTTTAGCGCC 60.304 47.826 2.29 0.00 0.00 6.53
47 48 3.561725 AGCTATCCAGTTCATTTTAGCGC 59.438 43.478 0.00 0.00 37.66 5.92
48 49 5.107837 CGTAGCTATCCAGTTCATTTTAGCG 60.108 44.000 0.00 0.00 37.66 4.26
49 50 5.177696 CCGTAGCTATCCAGTTCATTTTAGC 59.822 44.000 0.00 0.00 33.85 3.09
50 51 6.421202 GTCCGTAGCTATCCAGTTCATTTTAG 59.579 42.308 0.00 0.00 0.00 1.85
51 52 6.278363 GTCCGTAGCTATCCAGTTCATTTTA 58.722 40.000 0.00 0.00 0.00 1.52
52 53 5.116882 GTCCGTAGCTATCCAGTTCATTTT 58.883 41.667 0.00 0.00 0.00 1.82
53 54 4.443034 GGTCCGTAGCTATCCAGTTCATTT 60.443 45.833 0.00 0.00 0.00 2.32
54 55 3.069729 GGTCCGTAGCTATCCAGTTCATT 59.930 47.826 0.00 0.00 0.00 2.57
55 56 2.628657 GGTCCGTAGCTATCCAGTTCAT 59.371 50.000 0.00 0.00 0.00 2.57
56 57 2.029623 GGTCCGTAGCTATCCAGTTCA 58.970 52.381 0.00 0.00 0.00 3.18
57 58 2.308690 AGGTCCGTAGCTATCCAGTTC 58.691 52.381 0.00 0.00 0.00 3.01
58 59 2.456073 AGGTCCGTAGCTATCCAGTT 57.544 50.000 0.00 0.00 0.00 3.16
59 60 2.174210 TGTAGGTCCGTAGCTATCCAGT 59.826 50.000 0.00 0.00 37.97 4.00
60 61 2.814919 CTGTAGGTCCGTAGCTATCCAG 59.185 54.545 0.00 0.00 37.97 3.86
61 62 2.174210 ACTGTAGGTCCGTAGCTATCCA 59.826 50.000 0.00 0.00 37.97 3.41
62 63 2.861274 ACTGTAGGTCCGTAGCTATCC 58.139 52.381 0.00 0.00 37.97 2.59
63 64 4.002316 CCTACTGTAGGTCCGTAGCTATC 58.998 52.174 23.01 0.00 41.18 2.08
64 65 3.649981 TCCTACTGTAGGTCCGTAGCTAT 59.350 47.826 28.21 0.00 46.32 2.97
65 66 3.041211 TCCTACTGTAGGTCCGTAGCTA 58.959 50.000 28.21 7.72 46.32 3.32
66 67 1.842562 TCCTACTGTAGGTCCGTAGCT 59.157 52.381 28.21 0.00 46.32 3.32
67 68 2.220313 CTCCTACTGTAGGTCCGTAGC 58.780 57.143 28.21 0.00 46.32 3.58
68 69 3.465871 GACTCCTACTGTAGGTCCGTAG 58.534 54.545 28.21 21.00 46.32 3.51
69 70 2.159043 CGACTCCTACTGTAGGTCCGTA 60.159 54.545 28.21 11.85 46.32 4.02
70 71 1.406614 CGACTCCTACTGTAGGTCCGT 60.407 57.143 28.21 22.91 46.32 4.69
71 72 1.297664 CGACTCCTACTGTAGGTCCG 58.702 60.000 28.21 23.96 46.32 4.79
72 73 1.023502 GCGACTCCTACTGTAGGTCC 58.976 60.000 28.21 18.40 46.32 4.46
73 74 2.041251 AGCGACTCCTACTGTAGGTC 57.959 55.000 28.21 19.89 46.32 3.85
74 75 2.770802 TCTAGCGACTCCTACTGTAGGT 59.229 50.000 28.21 14.13 46.32 3.08
76 77 3.245754 CGTTCTAGCGACTCCTACTGTAG 59.754 52.174 7.87 7.87 0.00 2.74
77 78 3.193263 CGTTCTAGCGACTCCTACTGTA 58.807 50.000 0.00 0.00 0.00 2.74
78 79 2.008329 CGTTCTAGCGACTCCTACTGT 58.992 52.381 0.00 0.00 0.00 3.55
79 80 1.331138 CCGTTCTAGCGACTCCTACTG 59.669 57.143 0.00 0.00 0.00 2.74
80 81 1.209019 TCCGTTCTAGCGACTCCTACT 59.791 52.381 0.00 0.00 0.00 2.57
81 82 1.661341 TCCGTTCTAGCGACTCCTAC 58.339 55.000 0.00 0.00 0.00 3.18
82 83 2.492012 GATCCGTTCTAGCGACTCCTA 58.508 52.381 0.00 0.00 0.00 2.94
83 84 1.310904 GATCCGTTCTAGCGACTCCT 58.689 55.000 0.00 0.00 0.00 3.69
84 85 0.041135 CGATCCGTTCTAGCGACTCC 60.041 60.000 0.00 0.00 0.00 3.85
85 86 0.041135 CCGATCCGTTCTAGCGACTC 60.041 60.000 0.00 0.00 0.00 3.36
86 87 2.023318 CCGATCCGTTCTAGCGACT 58.977 57.895 0.00 0.00 0.00 4.18
87 88 1.657794 GCCGATCCGTTCTAGCGAC 60.658 63.158 0.00 0.00 0.00 5.19
88 89 2.719979 GCCGATCCGTTCTAGCGA 59.280 61.111 0.00 0.00 0.00 4.93
89 90 2.354773 GGCCGATCCGTTCTAGCG 60.355 66.667 0.00 0.00 0.00 4.26
90 91 1.300233 CAGGCCGATCCGTTCTAGC 60.300 63.158 0.00 0.00 40.77 3.42
91 92 1.300233 GCAGGCCGATCCGTTCTAG 60.300 63.158 0.00 0.00 40.77 2.43
92 93 0.466739 TAGCAGGCCGATCCGTTCTA 60.467 55.000 0.00 0.00 40.77 2.10
93 94 1.115930 ATAGCAGGCCGATCCGTTCT 61.116 55.000 0.00 0.00 40.77 3.01
94 95 0.601558 TATAGCAGGCCGATCCGTTC 59.398 55.000 0.00 0.00 40.77 3.95
95 96 0.603569 CTATAGCAGGCCGATCCGTT 59.396 55.000 0.00 0.00 40.77 4.44
96 97 0.539901 ACTATAGCAGGCCGATCCGT 60.540 55.000 0.00 0.00 40.77 4.69
97 98 0.109086 CACTATAGCAGGCCGATCCG 60.109 60.000 0.00 0.00 40.77 4.18
98 99 0.969894 ACACTATAGCAGGCCGATCC 59.030 55.000 0.00 0.00 0.00 3.36
99 100 2.094649 GGTACACTATAGCAGGCCGATC 60.095 54.545 0.00 0.00 0.00 3.69
100 101 1.893801 GGTACACTATAGCAGGCCGAT 59.106 52.381 0.00 0.00 0.00 4.18
101 102 1.325355 GGTACACTATAGCAGGCCGA 58.675 55.000 0.00 0.00 0.00 5.54
102 103 1.037493 TGGTACACTATAGCAGGCCG 58.963 55.000 0.00 0.00 0.00 6.13
116 117 0.876342 GCACCTCTAGCGCATGGTAC 60.876 60.000 11.47 2.80 0.00 3.34
117 118 1.326951 TGCACCTCTAGCGCATGGTA 61.327 55.000 11.47 0.00 33.85 3.25
118 119 2.187946 GCACCTCTAGCGCATGGT 59.812 61.111 11.47 9.08 0.00 3.55
119 120 1.886313 CTGCACCTCTAGCGCATGG 60.886 63.158 11.47 8.37 34.63 3.66
120 121 0.103026 TACTGCACCTCTAGCGCATG 59.897 55.000 11.47 0.79 34.63 4.06
121 122 0.824109 TTACTGCACCTCTAGCGCAT 59.176 50.000 11.47 0.00 34.63 4.73
122 123 0.606096 TTTACTGCACCTCTAGCGCA 59.394 50.000 11.47 0.00 33.85 6.09
123 124 1.594862 CATTTACTGCACCTCTAGCGC 59.405 52.381 0.00 0.00 33.85 5.92
124 125 2.205074 CCATTTACTGCACCTCTAGCG 58.795 52.381 0.00 0.00 33.85 4.26
125 126 2.092914 ACCCATTTACTGCACCTCTAGC 60.093 50.000 0.00 0.00 0.00 3.42
126 127 3.914426 ACCCATTTACTGCACCTCTAG 57.086 47.619 0.00 0.00 0.00 2.43
127 128 3.308117 CCAACCCATTTACTGCACCTCTA 60.308 47.826 0.00 0.00 0.00 2.43
128 129 2.555227 CCAACCCATTTACTGCACCTCT 60.555 50.000 0.00 0.00 0.00 3.69
129 130 1.818674 CCAACCCATTTACTGCACCTC 59.181 52.381 0.00 0.00 0.00 3.85
130 131 1.146982 ACCAACCCATTTACTGCACCT 59.853 47.619 0.00 0.00 0.00 4.00
131 132 1.544246 GACCAACCCATTTACTGCACC 59.456 52.381 0.00 0.00 0.00 5.01
132 133 1.544246 GGACCAACCCATTTACTGCAC 59.456 52.381 0.00 0.00 0.00 4.57
133 134 1.145945 TGGACCAACCCATTTACTGCA 59.854 47.619 0.00 0.00 38.00 4.41
134 135 1.917872 TGGACCAACCCATTTACTGC 58.082 50.000 0.00 0.00 38.00 4.40
135 136 3.128589 CGATTGGACCAACCCATTTACTG 59.871 47.826 9.67 0.00 35.87 2.74
136 137 3.245122 ACGATTGGACCAACCCATTTACT 60.245 43.478 9.67 0.00 35.87 2.24
137 138 3.086282 ACGATTGGACCAACCCATTTAC 58.914 45.455 9.67 0.00 35.87 2.01
138 139 3.085533 CACGATTGGACCAACCCATTTA 58.914 45.455 9.67 0.00 35.87 1.40
139 140 1.892474 CACGATTGGACCAACCCATTT 59.108 47.619 9.67 0.00 35.87 2.32
140 141 1.074727 TCACGATTGGACCAACCCATT 59.925 47.619 9.67 0.00 35.87 3.16
141 142 0.695924 TCACGATTGGACCAACCCAT 59.304 50.000 9.67 0.00 35.87 4.00
142 143 0.695924 ATCACGATTGGACCAACCCA 59.304 50.000 9.67 0.00 38.00 4.51
143 144 1.834188 AATCACGATTGGACCAACCC 58.166 50.000 9.67 3.70 38.00 4.11
144 145 2.671070 GCAAATCACGATTGGACCAACC 60.671 50.000 9.67 0.00 39.54 3.77
145 146 2.595386 GCAAATCACGATTGGACCAAC 58.405 47.619 9.67 2.97 0.00 3.77
146 147 1.543802 GGCAAATCACGATTGGACCAA 59.456 47.619 9.92 9.92 0.00 3.67
147 148 1.173043 GGCAAATCACGATTGGACCA 58.827 50.000 0.00 0.00 0.00 4.02
148 149 0.098728 CGGCAAATCACGATTGGACC 59.901 55.000 0.00 0.00 0.00 4.46
149 150 0.802494 ACGGCAAATCACGATTGGAC 59.198 50.000 0.00 0.00 0.00 4.02
150 151 0.801872 CACGGCAAATCACGATTGGA 59.198 50.000 0.00 0.00 0.00 3.53
151 152 0.179166 CCACGGCAAATCACGATTGG 60.179 55.000 0.00 0.00 0.00 3.16
152 153 0.801872 TCCACGGCAAATCACGATTG 59.198 50.000 0.00 0.00 0.00 2.67
153 154 1.401552 CATCCACGGCAAATCACGATT 59.598 47.619 0.00 0.00 0.00 3.34
154 155 1.016627 CATCCACGGCAAATCACGAT 58.983 50.000 0.00 0.00 0.00 3.73
155 156 1.024046 CCATCCACGGCAAATCACGA 61.024 55.000 0.00 0.00 0.00 4.35
156 157 1.024046 TCCATCCACGGCAAATCACG 61.024 55.000 0.00 0.00 0.00 4.35
157 158 0.734889 CTCCATCCACGGCAAATCAC 59.265 55.000 0.00 0.00 0.00 3.06
158 159 0.394216 CCTCCATCCACGGCAAATCA 60.394 55.000 0.00 0.00 0.00 2.57
159 160 0.394352 ACCTCCATCCACGGCAAATC 60.394 55.000 0.00 0.00 0.00 2.17
160 161 0.394352 GACCTCCATCCACGGCAAAT 60.394 55.000 0.00 0.00 0.00 2.32
161 162 1.002624 GACCTCCATCCACGGCAAA 60.003 57.895 0.00 0.00 0.00 3.68
162 163 2.668632 GACCTCCATCCACGGCAA 59.331 61.111 0.00 0.00 0.00 4.52
163 164 3.399181 GGACCTCCATCCACGGCA 61.399 66.667 0.00 0.00 38.77 5.69
164 165 4.176752 GGGACCTCCATCCACGGC 62.177 72.222 0.00 0.00 40.96 5.68
165 166 0.471971 ATAGGGACCTCCATCCACGG 60.472 60.000 0.00 0.00 40.96 4.94
166 167 1.070758 CAATAGGGACCTCCATCCACG 59.929 57.143 0.00 0.00 40.96 4.94
167 168 1.421646 CCAATAGGGACCTCCATCCAC 59.578 57.143 0.00 0.00 40.96 4.02
168 169 1.296832 TCCAATAGGGACCTCCATCCA 59.703 52.381 0.00 0.00 42.15 3.41
169 170 2.118403 TCCAATAGGGACCTCCATCC 57.882 55.000 0.00 0.00 42.15 3.51
178 179 0.824109 CACTCAGCGTCCAATAGGGA 59.176 55.000 0.00 0.00 45.89 4.20
179 180 0.811616 GCACTCAGCGTCCAATAGGG 60.812 60.000 0.00 0.00 34.83 3.53
180 181 2.682893 GCACTCAGCGTCCAATAGG 58.317 57.895 0.00 0.00 0.00 2.57
190 191 0.173481 TCCTATGTGACGCACTCAGC 59.827 55.000 10.54 0.00 40.87 4.26
191 192 1.469940 GGTCCTATGTGACGCACTCAG 60.470 57.143 10.54 7.57 36.07 3.35
192 193 0.530744 GGTCCTATGTGACGCACTCA 59.469 55.000 10.54 0.45 36.07 3.41
193 194 0.818296 AGGTCCTATGTGACGCACTC 59.182 55.000 10.54 0.00 36.07 3.51
194 195 0.818296 GAGGTCCTATGTGACGCACT 59.182 55.000 10.54 0.00 36.07 4.40
195 196 0.179108 GGAGGTCCTATGTGACGCAC 60.179 60.000 0.00 3.44 36.07 5.34
196 197 1.327690 GGGAGGTCCTATGTGACGCA 61.328 60.000 0.00 0.00 36.07 5.24
197 198 1.442148 GGGAGGTCCTATGTGACGC 59.558 63.158 0.00 0.00 36.07 5.19
198 199 1.035932 ACGGGAGGTCCTATGTGACG 61.036 60.000 0.00 0.00 36.07 4.35
199 200 1.192428 AACGGGAGGTCCTATGTGAC 58.808 55.000 0.00 0.00 35.95 3.67
200 201 2.662866 CTAACGGGAGGTCCTATGTGA 58.337 52.381 0.00 0.00 35.95 3.58
201 202 1.068741 GCTAACGGGAGGTCCTATGTG 59.931 57.143 0.00 0.00 35.95 3.21
202 203 1.063114 AGCTAACGGGAGGTCCTATGT 60.063 52.381 0.00 0.00 35.95 2.29
203 204 1.705873 AGCTAACGGGAGGTCCTATG 58.294 55.000 0.00 0.00 35.95 2.23
204 205 2.446285 AGTAGCTAACGGGAGGTCCTAT 59.554 50.000 0.00 0.00 35.95 2.57
205 206 1.849039 AGTAGCTAACGGGAGGTCCTA 59.151 52.381 0.00 0.00 35.95 2.94
206 207 0.630134 AGTAGCTAACGGGAGGTCCT 59.370 55.000 0.00 0.00 35.95 3.85
207 208 1.408340 GAAGTAGCTAACGGGAGGTCC 59.592 57.143 0.00 0.00 0.00 4.46
208 209 1.065251 CGAAGTAGCTAACGGGAGGTC 59.935 57.143 0.00 0.00 0.00 3.85
209 210 1.101331 CGAAGTAGCTAACGGGAGGT 58.899 55.000 0.00 0.00 0.00 3.85
210 211 1.101331 ACGAAGTAGCTAACGGGAGG 58.899 55.000 16.48 0.00 41.94 4.30
211 212 1.471684 ACACGAAGTAGCTAACGGGAG 59.528 52.381 19.97 11.87 41.61 4.30
212 213 1.200716 CACACGAAGTAGCTAACGGGA 59.799 52.381 19.97 0.00 41.61 5.14
213 214 1.068055 ACACACGAAGTAGCTAACGGG 60.068 52.381 14.10 14.10 41.61 5.28
214 215 1.983605 CACACACGAAGTAGCTAACGG 59.016 52.381 16.48 10.16 41.61 4.44
215 216 1.983605 CCACACACGAAGTAGCTAACG 59.016 52.381 12.46 12.46 41.61 3.18
216 217 2.334838 CCCACACACGAAGTAGCTAAC 58.665 52.381 0.00 0.00 41.61 2.34
217 218 1.337447 GCCCACACACGAAGTAGCTAA 60.337 52.381 0.00 0.00 41.61 3.09
218 219 0.245539 GCCCACACACGAAGTAGCTA 59.754 55.000 0.00 0.00 41.61 3.32
219 220 1.004918 GCCCACACACGAAGTAGCT 60.005 57.895 0.00 0.00 41.61 3.32
220 221 1.004918 AGCCCACACACGAAGTAGC 60.005 57.895 0.00 0.00 41.61 3.58
221 222 1.291877 GCAGCCCACACACGAAGTAG 61.292 60.000 0.00 0.00 41.61 2.57
222 223 1.301401 GCAGCCCACACACGAAGTA 60.301 57.895 0.00 0.00 41.61 2.24
224 225 3.357079 GGCAGCCCACACACGAAG 61.357 66.667 0.00 0.00 0.00 3.79
225 226 3.872603 AGGCAGCCCACACACGAA 61.873 61.111 8.22 0.00 0.00 3.85
226 227 4.624364 CAGGCAGCCCACACACGA 62.624 66.667 8.22 0.00 0.00 4.35
236 237 1.168407 TGTTTCAGTCAGCAGGCAGC 61.168 55.000 0.00 0.00 46.19 5.25
237 238 1.531423 ATGTTTCAGTCAGCAGGCAG 58.469 50.000 0.00 0.00 0.00 4.85
238 239 2.857186 TATGTTTCAGTCAGCAGGCA 57.143 45.000 0.00 0.00 0.00 4.75
239 240 3.441572 ACATTATGTTTCAGTCAGCAGGC 59.558 43.478 0.00 0.00 0.00 4.85
240 241 5.633830 AACATTATGTTTCAGTCAGCAGG 57.366 39.130 4.56 0.00 37.26 4.85
241 242 6.253746 GCTAACATTATGTTTCAGTCAGCAG 58.746 40.000 16.08 5.28 41.45 4.24
242 243 5.123820 GGCTAACATTATGTTTCAGTCAGCA 59.876 40.000 21.88 2.20 41.45 4.41
243 244 5.355350 AGGCTAACATTATGTTTCAGTCAGC 59.645 40.000 16.08 15.90 41.45 4.26
244 245 6.992063 AGGCTAACATTATGTTTCAGTCAG 57.008 37.500 16.08 7.33 41.45 3.51
245 246 6.821665 GGTAGGCTAACATTATGTTTCAGTCA 59.178 38.462 16.08 0.00 41.45 3.41
246 247 7.048512 AGGTAGGCTAACATTATGTTTCAGTC 58.951 38.462 16.08 9.81 41.45 3.51
247 248 6.958767 AGGTAGGCTAACATTATGTTTCAGT 58.041 36.000 16.08 2.49 41.45 3.41
248 249 7.865706 AAGGTAGGCTAACATTATGTTTCAG 57.134 36.000 16.08 9.40 41.45 3.02
249 250 8.644374 AAAAGGTAGGCTAACATTATGTTTCA 57.356 30.769 16.08 0.00 41.45 2.69
250 251 8.188799 GGAAAAGGTAGGCTAACATTATGTTTC 58.811 37.037 16.08 8.40 41.45 2.78
251 252 7.672239 TGGAAAAGGTAGGCTAACATTATGTTT 59.328 33.333 16.08 0.65 41.45 2.83
252 253 7.179269 TGGAAAAGGTAGGCTAACATTATGTT 58.821 34.615 15.22 15.22 43.88 2.71
253 254 6.727394 TGGAAAAGGTAGGCTAACATTATGT 58.273 36.000 12.94 0.00 0.00 2.29
254 255 7.040409 GGATGGAAAAGGTAGGCTAACATTATG 60.040 40.741 12.94 0.00 0.00 1.90
255 256 7.004691 GGATGGAAAAGGTAGGCTAACATTAT 58.995 38.462 12.94 0.00 0.00 1.28
256 257 6.362248 GGATGGAAAAGGTAGGCTAACATTA 58.638 40.000 12.94 0.00 0.00 1.90
257 258 5.201243 GGATGGAAAAGGTAGGCTAACATT 58.799 41.667 12.94 2.81 0.00 2.71
258 259 4.386424 GGGATGGAAAAGGTAGGCTAACAT 60.386 45.833 12.94 0.00 0.00 2.71
259 260 3.053917 GGGATGGAAAAGGTAGGCTAACA 60.054 47.826 12.94 0.00 0.00 2.41
260 261 3.202373 AGGGATGGAAAAGGTAGGCTAAC 59.798 47.826 0.00 0.00 0.00 2.34
261 262 3.202151 CAGGGATGGAAAAGGTAGGCTAA 59.798 47.826 0.00 0.00 0.00 3.09
262 263 2.777692 CAGGGATGGAAAAGGTAGGCTA 59.222 50.000 0.00 0.00 0.00 3.93
263 264 1.566231 CAGGGATGGAAAAGGTAGGCT 59.434 52.381 0.00 0.00 0.00 4.58
264 265 1.564348 TCAGGGATGGAAAAGGTAGGC 59.436 52.381 0.00 0.00 0.00 3.93
265 266 3.459598 TCATCAGGGATGGAAAAGGTAGG 59.540 47.826 6.39 0.00 40.15 3.18
266 267 4.712476 CTCATCAGGGATGGAAAAGGTAG 58.288 47.826 6.39 0.00 40.15 3.18
267 268 3.117888 GCTCATCAGGGATGGAAAAGGTA 60.118 47.826 6.39 0.00 40.15 3.08
268 269 2.357569 GCTCATCAGGGATGGAAAAGGT 60.358 50.000 6.39 0.00 40.15 3.50
269 270 2.305009 GCTCATCAGGGATGGAAAAGG 58.695 52.381 6.39 0.00 40.15 3.11
270 271 2.305009 GGCTCATCAGGGATGGAAAAG 58.695 52.381 6.39 0.00 40.15 2.27
271 272 1.640149 TGGCTCATCAGGGATGGAAAA 59.360 47.619 6.39 0.00 40.15 2.29
272 273 1.297968 TGGCTCATCAGGGATGGAAA 58.702 50.000 6.39 0.00 40.15 3.13
273 274 1.526315 ATGGCTCATCAGGGATGGAA 58.474 50.000 6.39 0.00 40.15 3.53
274 275 1.144298 CAATGGCTCATCAGGGATGGA 59.856 52.381 6.39 0.00 40.15 3.41
275 276 1.617322 CAATGGCTCATCAGGGATGG 58.383 55.000 6.39 0.00 40.15 3.51
276 277 1.617322 CCAATGGCTCATCAGGGATG 58.383 55.000 0.00 0.00 41.00 3.51
277 278 0.178970 GCCAATGGCTCATCAGGGAT 60.179 55.000 18.47 0.00 46.69 3.85
278 279 1.228228 GCCAATGGCTCATCAGGGA 59.772 57.895 18.47 0.00 46.69 4.20
279 280 3.851955 GCCAATGGCTCATCAGGG 58.148 61.111 18.47 0.00 46.69 4.45
290 291 0.552848 AGGTAGTCCATGGGCCAATG 59.447 55.000 14.18 13.83 35.89 2.82
291 292 0.552848 CAGGTAGTCCATGGGCCAAT 59.447 55.000 14.18 0.00 35.89 3.16
292 293 0.844661 ACAGGTAGTCCATGGGCCAA 60.845 55.000 14.18 0.00 35.89 4.52
293 294 1.229820 ACAGGTAGTCCATGGGCCA 60.230 57.895 14.18 9.61 35.89 5.36
294 295 1.224592 CACAGGTAGTCCATGGGCC 59.775 63.158 14.18 9.90 35.89 5.80
295 296 0.618458 TTCACAGGTAGTCCATGGGC 59.382 55.000 8.79 8.79 35.89 5.36
296 297 1.065418 GGTTCACAGGTAGTCCATGGG 60.065 57.143 13.02 0.00 35.89 4.00
297 298 1.065418 GGGTTCACAGGTAGTCCATGG 60.065 57.143 4.97 4.97 35.89 3.66
298 299 1.909302 AGGGTTCACAGGTAGTCCATG 59.091 52.381 0.00 0.00 35.89 3.66
299 300 1.909302 CAGGGTTCACAGGTAGTCCAT 59.091 52.381 0.00 0.00 35.89 3.41
300 301 1.348064 CAGGGTTCACAGGTAGTCCA 58.652 55.000 0.00 0.00 35.89 4.02
301 302 0.613777 CCAGGGTTCACAGGTAGTCC 59.386 60.000 0.00 0.00 0.00 3.85
302 303 0.613777 CCCAGGGTTCACAGGTAGTC 59.386 60.000 0.00 0.00 0.00 2.59
303 304 0.104620 ACCCAGGGTTCACAGGTAGT 60.105 55.000 4.76 0.00 27.29 2.73
304 305 0.324943 CACCCAGGGTTCACAGGTAG 59.675 60.000 9.12 0.00 31.02 3.18
305 306 1.131303 CCACCCAGGGTTCACAGGTA 61.131 60.000 9.12 0.00 31.02 3.08
306 307 2.460853 CCACCCAGGGTTCACAGGT 61.461 63.158 9.12 0.00 31.02 4.00
307 308 2.436109 CCACCCAGGGTTCACAGG 59.564 66.667 9.12 2.29 31.02 4.00
316 317 4.764771 CCACATGCCCCACCCAGG 62.765 72.222 0.00 0.00 37.03 4.45
317 318 3.528217 AACCACATGCCCCACCCAG 62.528 63.158 0.00 0.00 0.00 4.45
318 319 2.611964 AAAACCACATGCCCCACCCA 62.612 55.000 0.00 0.00 0.00 4.51
319 320 0.543174 TAAAACCACATGCCCCACCC 60.543 55.000 0.00 0.00 0.00 4.61
320 321 0.894835 CTAAAACCACATGCCCCACC 59.105 55.000 0.00 0.00 0.00 4.61
321 322 0.894835 CCTAAAACCACATGCCCCAC 59.105 55.000 0.00 0.00 0.00 4.61
322 323 0.780637 TCCTAAAACCACATGCCCCA 59.219 50.000 0.00 0.00 0.00 4.96
323 324 1.474330 CTCCTAAAACCACATGCCCC 58.526 55.000 0.00 0.00 0.00 5.80
324 325 0.817654 GCTCCTAAAACCACATGCCC 59.182 55.000 0.00 0.00 0.00 5.36
325 326 1.839424 AGCTCCTAAAACCACATGCC 58.161 50.000 0.00 0.00 0.00 4.40
326 327 2.094545 CCAAGCTCCTAAAACCACATGC 60.095 50.000 0.00 0.00 0.00 4.06
327 328 2.493278 CCCAAGCTCCTAAAACCACATG 59.507 50.000 0.00 0.00 0.00 3.21
328 329 2.378547 TCCCAAGCTCCTAAAACCACAT 59.621 45.455 0.00 0.00 0.00 3.21
329 330 1.777878 TCCCAAGCTCCTAAAACCACA 59.222 47.619 0.00 0.00 0.00 4.17
330 331 2.579410 TCCCAAGCTCCTAAAACCAC 57.421 50.000 0.00 0.00 0.00 4.16
331 332 2.291540 CCATCCCAAGCTCCTAAAACCA 60.292 50.000 0.00 0.00 0.00 3.67
332 333 2.379005 CCATCCCAAGCTCCTAAAACC 58.621 52.381 0.00 0.00 0.00 3.27
333 334 1.751351 GCCATCCCAAGCTCCTAAAAC 59.249 52.381 0.00 0.00 0.00 2.43
334 335 1.341976 GGCCATCCCAAGCTCCTAAAA 60.342 52.381 0.00 0.00 0.00 1.52
335 336 0.258774 GGCCATCCCAAGCTCCTAAA 59.741 55.000 0.00 0.00 0.00 1.85
336 337 1.922821 GGCCATCCCAAGCTCCTAA 59.077 57.895 0.00 0.00 0.00 2.69
337 338 2.443394 CGGCCATCCCAAGCTCCTA 61.443 63.158 2.24 0.00 0.00 2.94
338 339 3.801997 CGGCCATCCCAAGCTCCT 61.802 66.667 2.24 0.00 0.00 3.69
371 372 2.091665 AGAATTAGAACTGGCCCATGGG 60.092 50.000 27.87 27.87 38.57 4.00
372 373 3.303351 AGAATTAGAACTGGCCCATGG 57.697 47.619 4.14 4.14 0.00 3.66
373 374 5.652014 TGTTTAGAATTAGAACTGGCCCATG 59.348 40.000 0.00 0.00 0.00 3.66
374 375 5.826643 TGTTTAGAATTAGAACTGGCCCAT 58.173 37.500 0.00 0.00 0.00 4.00
375 376 5.249780 TGTTTAGAATTAGAACTGGCCCA 57.750 39.130 0.00 0.00 0.00 5.36
376 377 6.377146 TGAATGTTTAGAATTAGAACTGGCCC 59.623 38.462 0.00 0.00 0.00 5.80
377 378 7.121315 AGTGAATGTTTAGAATTAGAACTGGCC 59.879 37.037 0.00 0.00 0.00 5.36
378 379 8.045176 AGTGAATGTTTAGAATTAGAACTGGC 57.955 34.615 0.00 0.00 0.00 4.85
381 382 8.870879 GCGTAGTGAATGTTTAGAATTAGAACT 58.129 33.333 0.00 0.00 0.00 3.01
382 383 8.870879 AGCGTAGTGAATGTTTAGAATTAGAAC 58.129 33.333 0.00 0.00 0.00 3.01
383 384 8.997621 AGCGTAGTGAATGTTTAGAATTAGAA 57.002 30.769 0.00 0.00 0.00 2.10
384 385 8.997621 AAGCGTAGTGAATGTTTAGAATTAGA 57.002 30.769 0.00 0.00 0.00 2.10
385 386 9.690434 GAAAGCGTAGTGAATGTTTAGAATTAG 57.310 33.333 0.00 0.00 0.00 1.73
386 387 9.210329 TGAAAGCGTAGTGAATGTTTAGAATTA 57.790 29.630 0.00 0.00 0.00 1.40
387 388 8.094798 TGAAAGCGTAGTGAATGTTTAGAATT 57.905 30.769 0.00 0.00 0.00 2.17
388 389 7.667043 TGAAAGCGTAGTGAATGTTTAGAAT 57.333 32.000 0.00 0.00 0.00 2.40
389 390 7.117241 CTGAAAGCGTAGTGAATGTTTAGAA 57.883 36.000 0.00 0.00 0.00 2.10
390 391 6.706055 CTGAAAGCGTAGTGAATGTTTAGA 57.294 37.500 0.00 0.00 0.00 2.10
407 408 2.151202 TGTTTTCTAGGCCGCTGAAAG 58.849 47.619 16.21 2.61 32.36 2.62
408 409 2.264005 TGTTTTCTAGGCCGCTGAAA 57.736 45.000 13.97 13.97 0.00 2.69
409 410 2.489938 ATGTTTTCTAGGCCGCTGAA 57.510 45.000 0.00 0.00 0.00 3.02
410 411 3.055385 AGTTATGTTTTCTAGGCCGCTGA 60.055 43.478 0.00 0.00 0.00 4.26
411 412 3.270877 AGTTATGTTTTCTAGGCCGCTG 58.729 45.455 0.00 0.00 0.00 5.18
412 413 3.629142 AGTTATGTTTTCTAGGCCGCT 57.371 42.857 0.00 0.00 0.00 5.52
413 414 7.668525 ATAATAGTTATGTTTTCTAGGCCGC 57.331 36.000 0.00 0.00 0.00 6.53
438 439 9.762381 ACACCTTTATATTATGGGACAGAAAAA 57.238 29.630 0.00 0.00 44.93 1.94
439 440 9.762381 AACACCTTTATATTATGGGACAGAAAA 57.238 29.630 0.00 0.00 44.93 2.29
440 441 9.762381 AAACACCTTTATATTATGGGACAGAAA 57.238 29.630 0.00 0.00 44.93 2.52
467 468 9.953697 AGCGTTTTTGACACTACATTAATTAAA 57.046 25.926 1.21 0.00 0.00 1.52
468 469 9.601971 GAGCGTTTTTGACACTACATTAATTAA 57.398 29.630 0.00 0.00 0.00 1.40
469 470 8.231837 GGAGCGTTTTTGACACTACATTAATTA 58.768 33.333 0.00 0.00 0.00 1.40
470 471 7.040686 AGGAGCGTTTTTGACACTACATTAATT 60.041 33.333 0.00 0.00 0.00 1.40
471 472 6.430000 AGGAGCGTTTTTGACACTACATTAAT 59.570 34.615 0.00 0.00 0.00 1.40
472 473 5.761234 AGGAGCGTTTTTGACACTACATTAA 59.239 36.000 0.00 0.00 0.00 1.40
473 474 5.178623 CAGGAGCGTTTTTGACACTACATTA 59.821 40.000 0.00 0.00 0.00 1.90
474 475 4.024048 CAGGAGCGTTTTTGACACTACATT 60.024 41.667 0.00 0.00 0.00 2.71
475 476 3.498397 CAGGAGCGTTTTTGACACTACAT 59.502 43.478 0.00 0.00 0.00 2.29
476 477 2.869801 CAGGAGCGTTTTTGACACTACA 59.130 45.455 0.00 0.00 0.00 2.74
477 478 2.223377 CCAGGAGCGTTTTTGACACTAC 59.777 50.000 0.00 0.00 0.00 2.73
478 479 2.158871 ACCAGGAGCGTTTTTGACACTA 60.159 45.455 0.00 0.00 0.00 2.74
479 480 1.308998 CCAGGAGCGTTTTTGACACT 58.691 50.000 0.00 0.00 0.00 3.55
480 481 1.002792 GACCAGGAGCGTTTTTGACAC 60.003 52.381 0.00 0.00 0.00 3.67
481 482 1.305201 GACCAGGAGCGTTTTTGACA 58.695 50.000 0.00 0.00 0.00 3.58
482 483 0.591659 GGACCAGGAGCGTTTTTGAC 59.408 55.000 0.00 0.00 0.00 3.18
483 484 0.882927 CGGACCAGGAGCGTTTTTGA 60.883 55.000 0.00 0.00 0.00 2.69
484 485 1.574428 CGGACCAGGAGCGTTTTTG 59.426 57.895 0.00 0.00 0.00 2.44
485 486 1.599797 CCGGACCAGGAGCGTTTTT 60.600 57.895 0.00 0.00 0.00 1.94
486 487 2.032071 CCGGACCAGGAGCGTTTT 59.968 61.111 0.00 0.00 0.00 2.43
487 488 2.920912 TCCGGACCAGGAGCGTTT 60.921 61.111 0.00 0.00 34.92 3.60
501 502 0.179043 TCTCCTCATCTCCGACTCCG 60.179 60.000 0.00 0.00 0.00 4.63
502 503 2.060050 TTCTCCTCATCTCCGACTCC 57.940 55.000 0.00 0.00 0.00 3.85
503 504 3.429684 GGTTTTCTCCTCATCTCCGACTC 60.430 52.174 0.00 0.00 0.00 3.36
504 505 2.498078 GGTTTTCTCCTCATCTCCGACT 59.502 50.000 0.00 0.00 0.00 4.18
505 506 2.233922 TGGTTTTCTCCTCATCTCCGAC 59.766 50.000 0.00 0.00 0.00 4.79
506 507 2.233922 GTGGTTTTCTCCTCATCTCCGA 59.766 50.000 0.00 0.00 0.00 4.55
507 508 2.622436 GTGGTTTTCTCCTCATCTCCG 58.378 52.381 0.00 0.00 0.00 4.63
508 509 2.305927 TGGTGGTTTTCTCCTCATCTCC 59.694 50.000 0.00 0.00 0.00 3.71
509 510 3.604582 CTGGTGGTTTTCTCCTCATCTC 58.395 50.000 0.00 0.00 0.00 2.75
510 511 2.307098 CCTGGTGGTTTTCTCCTCATCT 59.693 50.000 0.00 0.00 0.00 2.90
511 512 2.040412 ACCTGGTGGTTTTCTCCTCATC 59.960 50.000 0.00 0.00 46.05 2.92
512 513 2.065799 ACCTGGTGGTTTTCTCCTCAT 58.934 47.619 0.00 0.00 46.05 2.90
513 514 1.518367 ACCTGGTGGTTTTCTCCTCA 58.482 50.000 0.00 0.00 46.05 3.86
527 528 4.323477 TTCCAACGCCGGACCTGG 62.323 66.667 5.05 7.83 33.75 4.45
528 529 3.047877 GTTCCAACGCCGGACCTG 61.048 66.667 5.05 0.00 33.75 4.00
529 530 3.239253 AGTTCCAACGCCGGACCT 61.239 61.111 5.05 0.00 33.75 3.85
530 531 3.047877 CAGTTCCAACGCCGGACC 61.048 66.667 5.05 0.00 33.75 4.46
531 532 2.029964 TCAGTTCCAACGCCGGAC 59.970 61.111 5.05 0.00 33.75 4.79
532 533 2.029964 GTCAGTTCCAACGCCGGA 59.970 61.111 5.05 0.00 0.00 5.14
533 534 2.280524 TGTCAGTTCCAACGCCGG 60.281 61.111 0.00 0.00 0.00 6.13
534 535 2.935955 GTGTCAGTTCCAACGCCG 59.064 61.111 0.00 0.00 0.00 6.46
552 553 0.674895 ACATCTTCACGCCTTGCCTC 60.675 55.000 0.00 0.00 0.00 4.70
565 566 2.761208 CCTCTCCGTCCTTGTACATCTT 59.239 50.000 0.00 0.00 0.00 2.40
581 584 1.374252 TTGAAACTCGCCGCCTCTC 60.374 57.895 0.00 0.00 0.00 3.20
676 699 2.891191 TCCTTCCCAACGCCTAAATT 57.109 45.000 0.00 0.00 0.00 1.82
722 745 3.047877 CTTTGGACGGACGGGCAC 61.048 66.667 0.00 0.00 0.00 5.01
864 888 2.320675 AGAGAGAGAAGGGGAGGGAAAT 59.679 50.000 0.00 0.00 0.00 2.17
889 915 2.903357 GCTTGGATCGGAGAGGCA 59.097 61.111 0.00 0.00 43.63 4.75
997 1023 2.825836 GCAGCTGTTCCCCATCGG 60.826 66.667 16.64 0.00 0.00 4.18
1164 1190 4.500116 GAGGAGTGCTCGTCGGGC 62.500 72.222 11.02 11.02 35.24 6.13
1539 1565 2.807045 GAGACGACGCTGCTGTGG 60.807 66.667 9.09 1.76 0.00 4.17
1749 1775 9.992910 TGATTATTGATGAACAAGAAATTCTCG 57.007 29.630 0.00 0.00 41.83 4.04
1772 1798 3.532155 GCGGCGAGTCCTCCTGAT 61.532 66.667 12.98 0.00 0.00 2.90
1827 1853 0.909623 GGCGGCCATATATACCTGGT 59.090 55.000 15.62 4.05 34.86 4.00
1836 1862 3.696045 TGCATTATAAAGGCGGCCATAT 58.304 40.909 23.09 19.86 0.00 1.78
1837 1863 3.147553 TGCATTATAAAGGCGGCCATA 57.852 42.857 23.09 14.15 0.00 2.74
1838 1864 1.993956 TGCATTATAAAGGCGGCCAT 58.006 45.000 23.09 6.30 0.00 4.40
1839 1865 1.769026 TTGCATTATAAAGGCGGCCA 58.231 45.000 23.09 0.00 0.00 5.36
1841 1867 3.369546 ACATTGCATTATAAAGGCGGC 57.630 42.857 0.00 0.00 0.00 6.53
1843 1869 6.088483 CAGCATTACATTGCATTATAAAGGCG 59.912 38.462 7.67 0.00 45.23 5.52
1844 1870 6.925165 ACAGCATTACATTGCATTATAAAGGC 59.075 34.615 5.74 5.74 45.23 4.35
1845 1871 7.922278 ACACAGCATTACATTGCATTATAAAGG 59.078 33.333 0.00 0.00 45.23 3.11
1846 1872 8.861033 ACACAGCATTACATTGCATTATAAAG 57.139 30.769 0.00 0.00 45.23 1.85
1861 1890 8.764287 CATATCACGAAGAAATACACAGCATTA 58.236 33.333 0.00 0.00 0.00 1.90
1864 1893 6.106003 ACATATCACGAAGAAATACACAGCA 58.894 36.000 0.00 0.00 0.00 4.41
1877 1906 6.200097 CACCATCGAAACATACATATCACGAA 59.800 38.462 0.00 0.00 32.69 3.85
1880 1909 5.612492 CGCACCATCGAAACATACATATCAC 60.612 44.000 0.00 0.00 0.00 3.06
1881 1910 4.447389 CGCACCATCGAAACATACATATCA 59.553 41.667 0.00 0.00 0.00 2.15
1882 1911 4.684242 TCGCACCATCGAAACATACATATC 59.316 41.667 0.00 0.00 35.31 1.63
1883 1912 4.627058 TCGCACCATCGAAACATACATAT 58.373 39.130 0.00 0.00 35.31 1.78
1884 1913 4.048241 TCGCACCATCGAAACATACATA 57.952 40.909 0.00 0.00 35.31 2.29
1950 1987 5.931146 AGATGGCAATTTTCGCATAAACAAA 59.069 32.000 0.00 0.00 0.00 2.83
2000 2037 6.038356 AGCATTTCATCCATTTTAGCTTTCG 58.962 36.000 0.00 0.00 0.00 3.46
2006 2043 4.812626 GGCCAAGCATTTCATCCATTTTAG 59.187 41.667 0.00 0.00 0.00 1.85
2019 2056 1.342174 CAGAACAAGTGGCCAAGCATT 59.658 47.619 7.24 0.00 0.00 3.56
2021 2058 1.737355 GCAGAACAAGTGGCCAAGCA 61.737 55.000 7.24 0.00 0.00 3.91
2030 2067 0.324943 ATAGCCCGTGCAGAACAAGT 59.675 50.000 0.00 0.00 41.13 3.16
2037 2074 0.816825 AGCAATGATAGCCCGTGCAG 60.817 55.000 0.00 0.00 41.13 4.41
2048 2085 4.071961 TGATACTAACGGCAGCAATGAT 57.928 40.909 0.00 0.00 0.00 2.45
2062 2099 7.559335 ACATCCTGATTAGGCAATGATACTA 57.441 36.000 11.02 0.00 44.22 1.82
2063 2100 6.445451 ACATCCTGATTAGGCAATGATACT 57.555 37.500 11.02 0.00 44.22 2.12
2104 2145 4.577834 TTTTTAAAGGAACCGGCAGAAG 57.422 40.909 0.00 0.00 0.00 2.85
2126 2167 5.446143 AAATCATGGTTACAAGCGTCAAA 57.554 34.783 0.00 0.00 0.00 2.69
2162 2203 1.134907 GGAAAATGGCATGAGCACTGG 60.135 52.381 0.00 0.00 44.61 4.00
2267 2322 3.056607 ACTGTACTGCCAAAATGAATGCC 60.057 43.478 0.00 0.00 0.00 4.40
2281 2339 8.668510 ATTTGCTATAGAATTGGACTGTACTG 57.331 34.615 3.21 0.00 0.00 2.74
2457 2518 6.365247 CAGAAAGAAACTGGCAATCAAGAATG 59.635 38.462 0.00 0.00 0.00 2.67
2464 2525 3.366781 GGCTCAGAAAGAAACTGGCAATC 60.367 47.826 0.00 0.00 35.18 2.67
2485 2546 7.772332 ATCTACTTAAGTTGCTATTTCACGG 57.228 36.000 14.49 0.00 0.00 4.94
2553 2614 8.223177 AGTACCACACACTTCATATCTAGTAC 57.777 38.462 0.00 0.00 0.00 2.73
2554 2615 7.501559 GGAGTACCACACACTTCATATCTAGTA 59.498 40.741 0.00 0.00 35.97 1.82
2555 2616 6.321690 GGAGTACCACACACTTCATATCTAGT 59.678 42.308 0.00 0.00 35.97 2.57
2567 2628 1.272769 GACAGAGGGAGTACCACACAC 59.727 57.143 0.00 0.00 43.89 3.82
2568 2629 1.629043 GACAGAGGGAGTACCACACA 58.371 55.000 0.00 0.00 43.89 3.72
2585 2646 7.360361 CCAAAAACGCTCTTATATTATGGGAC 58.640 38.462 0.00 0.00 0.00 4.46
2586 2647 6.016610 GCCAAAAACGCTCTTATATTATGGGA 60.017 38.462 0.00 0.00 0.00 4.37
2587 2648 6.149633 GCCAAAAACGCTCTTATATTATGGG 58.850 40.000 0.00 0.00 0.00 4.00
2588 2649 6.636850 GTGCCAAAAACGCTCTTATATTATGG 59.363 38.462 0.00 0.00 0.00 2.74
2589 2650 7.192913 TGTGCCAAAAACGCTCTTATATTATG 58.807 34.615 0.00 0.00 0.00 1.90
2590 2651 7.328277 TGTGCCAAAAACGCTCTTATATTAT 57.672 32.000 0.00 0.00 0.00 1.28
2591 2652 6.745159 TGTGCCAAAAACGCTCTTATATTA 57.255 33.333 0.00 0.00 0.00 0.98
2592 2653 5.637006 TGTGCCAAAAACGCTCTTATATT 57.363 34.783 0.00 0.00 0.00 1.28
2593 2654 5.183140 ACTTGTGCCAAAAACGCTCTTATAT 59.817 36.000 0.00 0.00 0.00 0.86
2594 2655 4.517453 ACTTGTGCCAAAAACGCTCTTATA 59.483 37.500 0.00 0.00 0.00 0.98
2595 2656 3.317993 ACTTGTGCCAAAAACGCTCTTAT 59.682 39.130 0.00 0.00 0.00 1.73
2596 2657 2.685897 ACTTGTGCCAAAAACGCTCTTA 59.314 40.909 0.00 0.00 0.00 2.10
2597 2658 1.476488 ACTTGTGCCAAAAACGCTCTT 59.524 42.857 0.00 0.00 0.00 2.85
2598 2659 1.102978 ACTTGTGCCAAAAACGCTCT 58.897 45.000 0.00 0.00 0.00 4.09
2599 2660 1.199624 CACTTGTGCCAAAAACGCTC 58.800 50.000 0.00 0.00 0.00 5.03
2600 2661 0.530288 ACACTTGTGCCAAAAACGCT 59.470 45.000 0.10 0.00 0.00 5.07
2601 2662 1.849829 GTACACTTGTGCCAAAAACGC 59.150 47.619 0.10 0.00 0.00 4.84
2602 2663 3.105203 CAGTACACTTGTGCCAAAAACG 58.895 45.455 0.10 0.00 0.00 3.60
2603 2664 4.102649 GACAGTACACTTGTGCCAAAAAC 58.897 43.478 0.10 0.00 0.00 2.43
2604 2665 3.759086 TGACAGTACACTTGTGCCAAAAA 59.241 39.130 0.10 0.00 0.00 1.94
2605 2666 3.348119 TGACAGTACACTTGTGCCAAAA 58.652 40.909 0.10 0.00 0.00 2.44
2606 2667 2.992593 TGACAGTACACTTGTGCCAAA 58.007 42.857 0.10 0.00 0.00 3.28
2607 2668 2.700722 TGACAGTACACTTGTGCCAA 57.299 45.000 0.10 0.00 0.00 4.52
2608 2669 2.700722 TTGACAGTACACTTGTGCCA 57.299 45.000 0.10 0.00 0.00 4.92
2609 2670 4.364415 TTTTTGACAGTACACTTGTGCC 57.636 40.909 0.10 0.00 0.00 5.01
2627 2688 8.738106 TCCGTCCCATAATATAAAAACGTTTTT 58.262 29.630 33.94 33.94 42.51 1.94
2628 2689 8.278729 TCCGTCCCATAATATAAAAACGTTTT 57.721 30.769 20.26 20.26 0.00 2.43
2629 2690 7.012610 CCTCCGTCCCATAATATAAAAACGTTT 59.987 37.037 7.96 7.96 0.00 3.60
2630 2691 6.484308 CCTCCGTCCCATAATATAAAAACGTT 59.516 38.462 0.00 0.00 0.00 3.99
2631 2692 5.993441 CCTCCGTCCCATAATATAAAAACGT 59.007 40.000 0.00 0.00 0.00 3.99
2632 2693 5.410439 CCCTCCGTCCCATAATATAAAAACG 59.590 44.000 0.00 0.00 0.00 3.60
2633 2694 6.536447 TCCCTCCGTCCCATAATATAAAAAC 58.464 40.000 0.00 0.00 0.00 2.43
2634 2695 6.330778 ACTCCCTCCGTCCCATAATATAAAAA 59.669 38.462 0.00 0.00 0.00 1.94
2635 2696 5.847817 ACTCCCTCCGTCCCATAATATAAAA 59.152 40.000 0.00 0.00 0.00 1.52
2636 2697 5.408824 ACTCCCTCCGTCCCATAATATAAA 58.591 41.667 0.00 0.00 0.00 1.40
2637 2698 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2638 2699 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2639 2700 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2640 2701 3.816842 GCTACTCCCTCCGTCCCATAATA 60.817 52.174 0.00 0.00 0.00 0.98
2641 2702 2.890814 CTACTCCCTCCGTCCCATAAT 58.109 52.381 0.00 0.00 0.00 1.28
2642 2703 1.756690 GCTACTCCCTCCGTCCCATAA 60.757 57.143 0.00 0.00 0.00 1.90
2643 2704 0.178970 GCTACTCCCTCCGTCCCATA 60.179 60.000 0.00 0.00 0.00 2.74
2644 2705 1.457831 GCTACTCCCTCCGTCCCAT 60.458 63.158 0.00 0.00 0.00 4.00
2645 2706 2.043248 GCTACTCCCTCCGTCCCA 60.043 66.667 0.00 0.00 0.00 4.37
2646 2707 2.128507 CAGCTACTCCCTCCGTCCC 61.129 68.421 0.00 0.00 0.00 4.46
2647 2708 0.971447 AACAGCTACTCCCTCCGTCC 60.971 60.000 0.00 0.00 0.00 4.79
2648 2709 1.760192 TAACAGCTACTCCCTCCGTC 58.240 55.000 0.00 0.00 0.00 4.79
2649 2710 2.091775 AGATAACAGCTACTCCCTCCGT 60.092 50.000 0.00 0.00 0.00 4.69
2650 2711 2.294791 CAGATAACAGCTACTCCCTCCG 59.705 54.545 0.00 0.00 0.00 4.63
2651 2712 3.068873 CACAGATAACAGCTACTCCCTCC 59.931 52.174 0.00 0.00 0.00 4.30
2652 2713 3.702045 ACACAGATAACAGCTACTCCCTC 59.298 47.826 0.00 0.00 0.00 4.30
2653 2714 3.714144 ACACAGATAACAGCTACTCCCT 58.286 45.455 0.00 0.00 0.00 4.20
2654 2715 4.160626 AGAACACAGATAACAGCTACTCCC 59.839 45.833 0.00 0.00 0.00 4.30
2655 2716 5.105752 CAGAACACAGATAACAGCTACTCC 58.894 45.833 0.00 0.00 0.00 3.85
2656 2717 5.715070 ACAGAACACAGATAACAGCTACTC 58.285 41.667 0.00 0.00 0.00 2.59
2657 2718 5.336849 GGACAGAACACAGATAACAGCTACT 60.337 44.000 0.00 0.00 0.00 2.57
2738 2800 8.934023 AGTGTTTGGAAATAATTTGGTAGAGA 57.066 30.769 0.00 0.00 0.00 3.10
2948 3010 3.921677 ACAGTTACACATAACCTCACCG 58.078 45.455 0.00 0.00 41.54 4.94
3228 3290 7.534085 TTCATTAAGTGCCGACTTATACTTG 57.466 36.000 0.00 0.00 42.92 3.16
3399 3462 6.666113 CCCTAAGGGCCATTTTCTTAAGTTTA 59.334 38.462 8.49 0.00 35.35 2.01
3571 3634 4.368315 TGTGATATGACCGCTGTTATCAC 58.632 43.478 18.74 18.74 45.67 3.06
3599 3662 1.266718 CGCAAGCCAGTTTTTAGCTCA 59.733 47.619 0.00 0.00 35.30 4.26
3745 3808 2.341846 TTGTCCAGGTGAGGAACAAC 57.658 50.000 0.00 0.00 39.92 3.32
3841 3906 5.673113 ACTAAAGGGGGTATGTAGGCATTAA 59.327 40.000 0.00 0.00 36.58 1.40
3953 4018 1.910722 CACCAGCCAGAGTAGCCAT 59.089 57.895 0.00 0.00 0.00 4.40
4037 4102 0.034059 AGCTGACAGACGGTTCCAAG 59.966 55.000 6.65 0.00 0.00 3.61
4101 4166 5.231357 TGCGTATCTGAAAATACAGTAAGCG 59.769 40.000 0.00 0.00 38.79 4.68
4308 4379 2.049888 AGGCTGCAAAGAGCTTATCC 57.950 50.000 0.50 0.00 45.94 2.59
4389 4460 3.907474 TGTCTCCAATACCAAACTCCTCA 59.093 43.478 0.00 0.00 0.00 3.86
4415 4486 9.958234 CGACATCTCCGATAATATCTTCAATAT 57.042 33.333 0.00 0.00 0.00 1.28
4593 4664 1.985473 TCACATTGCTTTGCTGTCCT 58.015 45.000 0.00 0.00 0.00 3.85
4651 4722 4.704965 GGAAGACACCCATATGTTACCTC 58.295 47.826 1.24 0.00 31.24 3.85
4832 7680 8.595533 GTCGACGCATGATACATCAATATAATT 58.404 33.333 0.00 0.00 40.69 1.40
4899 7747 5.241403 ACCATCACAATTAGTTCACTGGA 57.759 39.130 0.00 0.00 0.00 3.86
4989 7837 0.698238 TGGGCTACTGCAGTTGGAAT 59.302 50.000 27.06 0.12 41.91 3.01
5056 7904 2.038164 AGTTTAGGGTTCAAGTCGGACC 59.962 50.000 4.14 0.00 0.00 4.46
5135 7983 7.254421 GGCTGAAATACAAAACCACTTTTCAAG 60.254 37.037 0.00 0.00 33.97 3.02
5386 8238 2.331166 TGCAGGTTCCCTACTTGTACA 58.669 47.619 0.00 0.00 36.30 2.90
5395 8247 5.887214 AAATAAACTTTTGCAGGTTCCCT 57.113 34.783 3.05 0.00 33.04 4.20
5417 8269 8.397575 TGTGCCTATTTGTGTCATACTTTTTA 57.602 30.769 0.00 0.00 0.00 1.52
5469 8390 5.994887 ACAGACGTAGAGAATGCTAGTAG 57.005 43.478 0.00 0.00 0.00 2.57
5572 8493 7.660030 ACCCTGAATTAAACCATCCTTATTG 57.340 36.000 0.00 0.00 0.00 1.90
5612 8533 5.414765 CCACTTTAAACCCTGAACTATGGTC 59.585 44.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.