Multiple sequence alignment - TraesCS5A01G425800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G425800 chr5A 100.000 6700 0 0 1 6700 611138577 611131878 0.000000e+00 12373
1 TraesCS5A01G425800 chr5B 88.537 1832 107 42 593 2371 603888478 603886697 0.000000e+00 2124
2 TraesCS5A01G425800 chr5B 93.177 1363 52 22 4420 5749 603885145 603883791 0.000000e+00 1964
3 TraesCS5A01G425800 chr5B 88.693 849 49 16 5859 6692 603883779 603882963 0.000000e+00 992
4 TraesCS5A01G425800 chr5B 85.597 611 56 18 3760 4341 603885748 603885141 4.440000e-171 612
5 TraesCS5A01G425800 chr5B 90.210 429 41 1 3289 3716 603886293 603885865 5.870000e-155 558
6 TraesCS5A01G425800 chr5B 87.202 461 33 14 150 600 603889239 603888795 1.000000e-137 501
7 TraesCS5A01G425800 chrUn 96.777 1210 38 1 3252 4461 68146558 68147766 0.000000e+00 2017
8 TraesCS5A01G425800 chrUn 93.964 1342 49 13 4438 5749 68147777 68149116 0.000000e+00 2001
9 TraesCS5A01G425800 chrUn 84.951 1442 103 49 497 1869 68143941 68145337 0.000000e+00 1356
10 TraesCS5A01G425800 chrUn 90.498 863 47 13 5848 6700 68149173 68150010 0.000000e+00 1107
11 TraesCS5A01G425800 chrUn 91.356 671 39 6 1966 2630 68145398 68146055 0.000000e+00 900
12 TraesCS5A01G425800 chrUn 94.137 307 16 2 2916 3220 102835914 102835608 3.660000e-127 466
13 TraesCS5A01G425800 chrUn 95.423 284 13 0 2633 2916 68146284 68146567 2.850000e-123 453
14 TraesCS5A01G425800 chrUn 87.842 329 26 8 51 375 68143577 68143895 2.280000e-99 374
15 TraesCS5A01G425800 chr5D 84.951 1442 103 49 497 1869 489727524 489726128 0.000000e+00 1356
16 TraesCS5A01G425800 chr5D 96.944 720 21 1 3252 3971 489724907 489724189 0.000000e+00 1206
17 TraesCS5A01G425800 chr5D 91.356 671 39 6 1966 2630 489726067 489725410 0.000000e+00 900
18 TraesCS5A01G425800 chr5D 95.730 281 12 0 2636 2916 489725178 489724898 2.850000e-123 453
19 TraesCS5A01G425800 chr5D 87.842 329 26 8 51 375 489727888 489727570 2.280000e-99 374
20 TraesCS5A01G425800 chr6A 94.304 316 15 3 2912 3225 521473183 521472869 1.310000e-131 481
21 TraesCS5A01G425800 chr2D 94.498 309 15 2 2915 3222 13623269 13622962 6.080000e-130 475
22 TraesCS5A01G425800 chr4D 94.444 306 15 2 2916 3220 506269242 506269546 2.830000e-128 470
23 TraesCS5A01G425800 chr2A 94.156 308 16 2 2916 3222 12716241 12716547 1.020000e-127 468
24 TraesCS5A01G425800 chr2A 94.118 306 17 1 2916 3221 181795184 181795488 1.320000e-126 464
25 TraesCS5A01G425800 chr2A 93.791 306 17 2 2916 3220 391106545 391106241 6.120000e-125 459
26 TraesCS5A01G425800 chr1A 93.291 313 17 4 2916 3225 38361257 38360946 6.120000e-125 459
27 TraesCS5A01G425800 chr7A 93.204 309 19 2 2913 3220 57204314 57204621 2.850000e-123 453


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G425800 chr5A 611131878 611138577 6699 True 12373.000000 12373 100.000000 1 6700 1 chr5A.!!$R1 6699
1 TraesCS5A01G425800 chr5B 603882963 603889239 6276 True 1125.166667 2124 88.902667 150 6692 6 chr5B.!!$R1 6542
2 TraesCS5A01G425800 chrUn 68143577 68150010 6433 False 1172.571429 2017 91.544429 51 6700 7 chrUn.!!$F1 6649
3 TraesCS5A01G425800 chr5D 489724189 489727888 3699 True 857.800000 1356 91.364600 51 3971 5 chr5D.!!$R1 3920


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
637 973 0.031585 TCACTCCACGGTCTCAAACG 59.968 55.0 0.00 0.0 0.00 3.60 F
672 1008 0.313672 TCCAACAAAATCCGCAGCAC 59.686 50.0 0.00 0.0 0.00 4.40 F
1559 1975 0.330604 AGTACGGAGCACCACCTCTA 59.669 55.0 0.00 0.0 35.59 2.43 F
2933 3687 0.107017 CTACTCCCTCCGTCCGGTAA 60.107 60.0 0.00 0.0 36.47 2.85 F
3101 3855 0.034089 GCACTTAGCTCATTGGGGGT 60.034 55.0 0.00 0.0 41.15 4.95 F
3207 3961 0.036952 AGATGTGCACTCTTCACCGG 60.037 55.0 19.41 0.0 33.71 5.28 F
3208 3962 0.037326 GATGTGCACTCTTCACCGGA 60.037 55.0 19.41 0.0 33.71 5.14 F
3211 3965 0.037326 GTGCACTCTTCACCGGATGA 60.037 55.0 9.46 5.4 34.65 2.92 F
4902 5800 0.109723 GGCCTGGACAGTTACAACCA 59.890 55.0 0.00 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1547 1963 0.711184 AGGTAGGTAGAGGTGGTGCT 59.289 55.000 0.00 0.00 0.00 4.40 R
2579 3035 1.079543 CTTGGACACAGGAGCTCCG 60.080 63.158 26.95 22.44 42.08 4.63 R
3082 3836 0.034089 ACCCCCAATGAGCTAAGTGC 60.034 55.000 0.00 0.00 43.29 4.40 R
4235 5095 1.213296 ACACCTGGAAGTTGGAGTGT 58.787 50.000 0.00 0.00 33.81 3.55 R
4890 5788 1.228033 GGCCCGTGGTTGTAACTGT 60.228 57.895 0.00 0.00 0.00 3.55 R
4902 5800 1.228154 GAACCTCTTGTTGGCCCGT 60.228 57.895 0.00 0.00 37.29 5.28 R
5070 5973 2.425668 TGCTGAGTAGTTATAGCGCACA 59.574 45.455 11.47 0.00 38.96 4.57 R
5072 5975 2.688446 ACTGCTGAGTAGTTATAGCGCA 59.312 45.455 11.47 0.00 38.96 6.09 R
5857 6814 0.109597 CCGCAGCCTTAACAAGCAAG 60.110 55.000 0.00 0.00 0.00 4.01 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.597004 TGACCTTGGTCTGTACTAGTAGG 58.403 47.826 19.11 2.56 0.00 3.18
24 25 4.043812 TGACCTTGGTCTGTACTAGTAGGT 59.956 45.833 19.11 9.04 0.00 3.08
25 26 5.251468 TGACCTTGGTCTGTACTAGTAGGTA 59.749 44.000 19.11 0.00 0.00 3.08
26 27 5.504853 ACCTTGGTCTGTACTAGTAGGTAC 58.495 45.833 1.87 1.65 41.51 3.34
27 28 5.252630 ACCTTGGTCTGTACTAGTAGGTACT 59.747 44.000 1.87 0.00 41.64 2.73
28 29 6.445139 ACCTTGGTCTGTACTAGTAGGTACTA 59.555 42.308 1.87 0.00 41.64 1.82
29 30 7.128573 ACCTTGGTCTGTACTAGTAGGTACTAT 59.871 40.741 1.87 0.00 45.60 2.12
30 31 7.444792 CCTTGGTCTGTACTAGTAGGTACTATG 59.555 44.444 1.87 2.66 45.60 2.23
31 32 6.835174 TGGTCTGTACTAGTAGGTACTATGG 58.165 44.000 1.87 0.00 45.60 2.74
32 33 6.388100 TGGTCTGTACTAGTAGGTACTATGGT 59.612 42.308 1.87 0.00 45.60 3.55
33 34 6.709846 GGTCTGTACTAGTAGGTACTATGGTG 59.290 46.154 1.87 0.00 45.60 4.17
34 35 6.204495 GTCTGTACTAGTAGGTACTATGGTGC 59.796 46.154 1.87 0.00 45.60 5.01
35 36 6.005066 TGTACTAGTAGGTACTATGGTGCA 57.995 41.667 1.87 1.51 45.60 4.57
36 37 6.060136 TGTACTAGTAGGTACTATGGTGCAG 58.940 44.000 1.87 0.00 45.60 4.41
37 38 4.471548 ACTAGTAGGTACTATGGTGCAGG 58.528 47.826 1.45 0.00 45.60 4.85
38 39 3.682592 AGTAGGTACTATGGTGCAGGA 57.317 47.619 0.00 0.00 45.60 3.86
39 40 3.297736 AGTAGGTACTATGGTGCAGGAC 58.702 50.000 0.00 0.00 45.60 3.85
40 41 2.247699 AGGTACTATGGTGCAGGACA 57.752 50.000 0.00 0.00 36.02 4.02
41 42 2.764269 AGGTACTATGGTGCAGGACAT 58.236 47.619 0.00 0.00 36.02 3.06
42 43 3.923648 AGGTACTATGGTGCAGGACATA 58.076 45.455 0.00 0.00 36.02 2.29
43 44 4.295201 AGGTACTATGGTGCAGGACATAA 58.705 43.478 0.00 0.00 36.02 1.90
44 45 4.101119 AGGTACTATGGTGCAGGACATAAC 59.899 45.833 0.00 4.24 36.02 1.89
45 46 3.179443 ACTATGGTGCAGGACATAACG 57.821 47.619 7.01 0.00 0.00 3.18
46 47 2.500098 ACTATGGTGCAGGACATAACGT 59.500 45.455 7.01 0.00 0.00 3.99
47 48 1.737838 ATGGTGCAGGACATAACGTG 58.262 50.000 0.00 0.00 0.00 4.49
48 49 0.394938 TGGTGCAGGACATAACGTGT 59.605 50.000 0.00 0.00 45.83 4.49
76 77 4.274147 TGTTGTACCGCCCAATGATAAAT 58.726 39.130 0.00 0.00 0.00 1.40
77 78 4.097135 TGTTGTACCGCCCAATGATAAATG 59.903 41.667 0.00 0.00 0.00 2.32
133 134 7.428472 GCAGGAGTAACGCAAGAAAATAAATAC 59.572 37.037 0.00 0.00 43.62 1.89
141 142 6.865726 ACGCAAGAAAATAAATACATGCAACA 59.134 30.769 0.00 0.00 43.62 3.33
156 157 3.402110 TGCAACAGAATCCAGTGTACTG 58.598 45.455 5.05 5.05 43.40 2.74
174 175 1.520342 GCCAGCATCGAGAGACACC 60.520 63.158 0.00 0.00 46.97 4.16
180 181 0.244721 CATCGAGAGACACCACAGCA 59.755 55.000 0.00 0.00 46.97 4.41
204 209 2.603953 GCGAGTAGCGGTTCTTAAAGT 58.396 47.619 0.00 0.00 41.29 2.66
211 216 2.477754 AGCGGTTCTTAAAGTTACACGC 59.522 45.455 0.00 0.00 44.20 5.34
217 222 5.390567 GGTTCTTAAAGTTACACGCCTCATG 60.391 44.000 0.00 0.00 0.00 3.07
239 244 5.496556 TGAAAACTCTCAGTCCTGACAAAA 58.503 37.500 0.00 0.00 35.46 2.44
240 245 5.586243 TGAAAACTCTCAGTCCTGACAAAAG 59.414 40.000 0.00 0.00 35.46 2.27
241 246 3.118905 ACTCTCAGTCCTGACAAAAGC 57.881 47.619 0.00 0.00 35.46 3.51
242 247 2.224402 ACTCTCAGTCCTGACAAAAGCC 60.224 50.000 0.00 0.00 35.46 4.35
311 316 4.636206 GGCGTTTATCACTTTGAGGATCTT 59.364 41.667 0.00 0.00 34.92 2.40
347 352 0.872388 GGTGACGCGTCCAAGATTTT 59.128 50.000 34.34 0.00 0.00 1.82
351 356 0.238289 ACGCGTCCAAGATTTTGCTG 59.762 50.000 5.58 0.00 32.79 4.41
352 357 0.454957 CGCGTCCAAGATTTTGCTGG 60.455 55.000 0.00 0.00 32.79 4.85
353 358 0.881118 GCGTCCAAGATTTTGCTGGA 59.119 50.000 0.00 0.00 32.79 3.86
354 359 1.135575 GCGTCCAAGATTTTGCTGGAG 60.136 52.381 0.00 0.00 32.79 3.86
385 391 1.202486 ACAGACGCGGAACAGAGAAAA 60.202 47.619 12.47 0.00 0.00 2.29
445 455 7.506114 TCGGCATAGTATCTTCTTAACCAAAT 58.494 34.615 0.00 0.00 0.00 2.32
469 479 6.618287 TTAATCACCAAATATTCTCAGGCG 57.382 37.500 0.00 0.00 0.00 5.52
470 480 3.627395 TCACCAAATATTCTCAGGCGT 57.373 42.857 0.00 0.00 0.00 5.68
475 485 5.123186 CACCAAATATTCTCAGGCGTGTTTA 59.877 40.000 6.26 0.00 0.00 2.01
477 487 7.011950 CACCAAATATTCTCAGGCGTGTTTATA 59.988 37.037 6.26 3.48 0.00 0.98
480 490 8.612619 CAAATATTCTCAGGCGTGTTTATAGTT 58.387 33.333 6.26 5.56 0.00 2.24
488 498 4.457603 AGGCGTGTTTATAGTTTGCATTGA 59.542 37.500 0.00 0.00 0.00 2.57
494 504 4.850859 TTATAGTTTGCATTGACGACCG 57.149 40.909 0.00 0.00 0.00 4.79
537 549 6.470877 GTGAAGATAAGCTATACTAGATGCGC 59.529 42.308 0.00 0.00 0.00 6.09
550 562 5.847304 ACTAGATGCGCATCTCAAAGAATA 58.153 37.500 46.38 29.32 44.37 1.75
551 563 6.462500 ACTAGATGCGCATCTCAAAGAATAT 58.538 36.000 46.38 26.47 44.37 1.28
617 953 0.110056 GCCACAAAGCACGTGATCAG 60.110 55.000 22.23 11.92 36.43 2.90
637 973 0.031585 TCACTCCACGGTCTCAAACG 59.968 55.000 0.00 0.00 0.00 3.60
672 1008 0.313672 TCCAACAAAATCCGCAGCAC 59.686 50.000 0.00 0.00 0.00 4.40
677 1013 1.074775 AAAATCCGCAGCACAGGGA 59.925 52.632 0.00 0.00 0.00 4.20
683 1035 2.644212 CGCAGCACAGGGAGACTCT 61.644 63.158 1.74 0.00 0.00 3.24
715 1080 8.663025 GGGGCTAAACTATTAATAACGCTAATC 58.337 37.037 0.00 0.00 0.00 1.75
716 1081 9.211485 GGGCTAAACTATTAATAACGCTAATCA 57.789 33.333 0.00 0.00 0.00 2.57
773 1141 8.960591 TCCTAAAGCTAATCAAAGAATCTTTGG 58.039 33.333 28.86 17.16 0.00 3.28
779 1147 3.928727 TCAAAGAATCTTTGGCTGCAG 57.071 42.857 28.86 10.11 0.00 4.41
808 1176 2.095053 GCGAGCCAGAAAAGAATGAGAC 59.905 50.000 0.00 0.00 0.00 3.36
814 1182 3.250744 CAGAAAAGAATGAGACGCGGTA 58.749 45.455 12.47 0.00 0.00 4.02
820 1188 6.730960 AAAGAATGAGACGCGGTAAAAATA 57.269 33.333 12.47 0.00 0.00 1.40
821 1189 6.730960 AAGAATGAGACGCGGTAAAAATAA 57.269 33.333 12.47 0.00 0.00 1.40
822 1190 6.730960 AGAATGAGACGCGGTAAAAATAAA 57.269 33.333 12.47 0.00 0.00 1.40
824 1192 7.758495 AGAATGAGACGCGGTAAAAATAAAAT 58.242 30.769 12.47 0.00 0.00 1.82
825 1193 7.908601 AGAATGAGACGCGGTAAAAATAAAATC 59.091 33.333 12.47 0.00 0.00 2.17
845 1214 0.795085 CCAGAAGCGAGCAACAAGAG 59.205 55.000 0.00 0.00 0.00 2.85
917 1291 1.053048 GCCGCGCTTTTCTTTCTTTC 58.947 50.000 5.56 0.00 0.00 2.62
932 1306 9.442047 TTTCTTTCTTTCTTTGTTTATTTGCCA 57.558 25.926 0.00 0.00 0.00 4.92
933 1307 8.419076 TCTTTCTTTCTTTGTTTATTTGCCAC 57.581 30.769 0.00 0.00 0.00 5.01
935 1309 7.532682 TTCTTTCTTTGTTTATTTGCCACAC 57.467 32.000 0.00 0.00 0.00 3.82
936 1310 6.872920 TCTTTCTTTGTTTATTTGCCACACT 58.127 32.000 0.00 0.00 0.00 3.55
939 1313 4.404073 TCTTTGTTTATTTGCCACACTGGT 59.596 37.500 0.00 0.00 40.46 4.00
940 1314 5.594725 TCTTTGTTTATTTGCCACACTGGTA 59.405 36.000 0.00 0.00 40.46 3.25
941 1315 4.839668 TGTTTATTTGCCACACTGGTAC 57.160 40.909 0.00 0.00 40.46 3.34
1097 1471 4.015406 CCGGTGCCAGTGCCAGTA 62.015 66.667 0.00 0.00 36.33 2.74
1160 1548 3.303135 TGACGCTTCGAGCCCACT 61.303 61.111 0.00 0.00 38.18 4.00
1161 1549 2.507324 GACGCTTCGAGCCCACTC 60.507 66.667 0.00 0.00 38.18 3.51
1176 1564 3.322466 CTCGCCACACCCTTCCCT 61.322 66.667 0.00 0.00 0.00 4.20
1177 1565 3.316573 CTCGCCACACCCTTCCCTC 62.317 68.421 0.00 0.00 0.00 4.30
1180 1568 2.204151 CCACACCCTTCCCTCCCT 60.204 66.667 0.00 0.00 0.00 4.20
1185 1573 2.040359 CCCTTCCCTCCCTCCCTC 60.040 72.222 0.00 0.00 0.00 4.30
1188 1576 3.684628 TTCCCTCCCTCCCTCGCT 61.685 66.667 0.00 0.00 0.00 4.93
1204 1617 2.660064 GCTCCCTTCGCCTCCTCAA 61.660 63.158 0.00 0.00 0.00 3.02
1207 1620 2.124942 CCTTCGCCTCCTCAAGCC 60.125 66.667 0.00 0.00 0.00 4.35
1208 1621 2.510238 CTTCGCCTCCTCAAGCCG 60.510 66.667 0.00 0.00 0.00 5.52
1209 1622 4.082523 TTCGCCTCCTCAAGCCGG 62.083 66.667 0.00 0.00 0.00 6.13
1225 1638 3.849951 GGGCTCCCAATCTCGCGA 61.850 66.667 9.26 9.26 35.81 5.87
1336 1749 1.516864 CGCGGTTTTGTTTTCTCTTGC 59.483 47.619 0.00 0.00 0.00 4.01
1337 1750 1.858458 GCGGTTTTGTTTTCTCTTGCC 59.142 47.619 0.00 0.00 0.00 4.52
1340 1753 2.434336 GGTTTTGTTTTCTCTTGCCCCT 59.566 45.455 0.00 0.00 0.00 4.79
1375 1788 3.994853 GCTTGCGGCTTTGGGCTT 61.995 61.111 0.00 0.00 41.46 4.35
1389 1802 1.244019 GGGCTTGTGCTGACGGAAAT 61.244 55.000 0.00 0.00 39.59 2.17
1392 1808 2.423538 GGCTTGTGCTGACGGAAATAAT 59.576 45.455 0.00 0.00 39.59 1.28
1396 1812 6.406203 GCTTGTGCTGACGGAAATAATTTCC 61.406 44.000 0.00 0.00 44.58 3.13
1468 1884 0.468226 TGAGGTGGCTCAAGTCGTTT 59.532 50.000 0.00 0.00 0.00 3.60
1501 1917 2.271497 GTGGAGAGGCAGCAGCAT 59.729 61.111 2.65 0.00 44.61 3.79
1556 1972 1.119574 AACAGTACGGAGCACCACCT 61.120 55.000 0.00 0.00 35.59 4.00
1559 1975 0.330604 AGTACGGAGCACCACCTCTA 59.669 55.000 0.00 0.00 35.59 2.43
1560 1976 0.455005 GTACGGAGCACCACCTCTAC 59.545 60.000 0.00 0.00 35.59 2.59
1617 2033 3.775316 TCTCACCTCTGGGTTCCTTAATC 59.225 47.826 0.00 0.00 44.73 1.75
1620 2036 2.498443 ACCTCTGGGTTCCTTAATCCCA 60.498 50.000 2.15 2.15 44.73 4.37
1638 2055 9.895138 TTAATCCCATTTGGTCTACTTACTTAC 57.105 33.333 0.00 0.00 34.77 2.34
1647 2064 5.773680 TGGTCTACTTACTTACTCTGCTTGT 59.226 40.000 0.00 0.00 0.00 3.16
1840 2273 1.609208 GGTTCTGCACCACTGACAAT 58.391 50.000 0.00 0.00 46.42 2.71
1859 2292 6.070881 TGACAATATTGAATTTTGGGGACTGG 60.071 38.462 22.16 0.00 0.00 4.00
1889 2330 8.159344 AGTCCAAAAAGAACTCAACTAATCTG 57.841 34.615 0.00 0.00 0.00 2.90
1960 2402 9.755122 AGATATCTGTATAGTATTGCTACACCA 57.245 33.333 3.89 0.00 31.59 4.17
1977 2419 0.902531 CCAGTACACCGTCCCTGATT 59.097 55.000 0.00 0.00 0.00 2.57
1995 2437 7.127186 TCCCTGATTATAAACACATGAGGAGAA 59.873 37.037 0.00 0.00 0.00 2.87
1996 2438 7.941238 CCCTGATTATAAACACATGAGGAGAAT 59.059 37.037 0.00 0.00 0.00 2.40
2014 2456 5.709164 GGAGAATATATGTTTCTGCTGCCAT 59.291 40.000 11.86 0.00 38.20 4.40
2042 2495 2.551459 GGAATAGAGTGATGCCACATGC 59.449 50.000 0.00 0.00 45.54 4.06
2044 2497 3.572632 ATAGAGTGATGCCACATGCTT 57.427 42.857 0.00 0.00 45.54 3.91
2070 2523 6.954616 TTGCTGATGTGCTATGAAAATTTG 57.045 33.333 0.00 0.00 0.00 2.32
2258 2712 2.632996 CTCAGGACCTGGTTTCAGTACA 59.367 50.000 21.56 0.00 39.31 2.90
2264 2718 3.995048 GACCTGGTTTCAGTACACTTAGC 59.005 47.826 0.00 0.00 39.31 3.09
2330 2784 2.419673 TGCCACAATTATTCAGACTGCG 59.580 45.455 0.00 0.00 0.00 5.18
2367 2821 5.313712 TGGTATTCACCTTTTTCTCTGTCC 58.686 41.667 0.00 0.00 45.98 4.02
2455 2909 6.868339 GTGTATATTGATAAAATGCAAGGGGC 59.132 38.462 0.00 0.00 45.13 5.80
2468 2922 2.224499 GCAAGGGGCCTGAAAATTTCAA 60.224 45.455 9.85 0.00 39.58 2.69
2476 2930 4.625311 GGCCTGAAAATTTCAATGGTTACG 59.375 41.667 9.85 0.00 39.58 3.18
2481 2937 8.608317 CCTGAAAATTTCAATGGTTACGTTTTT 58.392 29.630 9.85 0.00 39.58 1.94
2506 2962 5.189180 AGAGAAATTGGATCTTGTGCTACC 58.811 41.667 0.00 0.00 0.00 3.18
2513 2969 6.569179 TTGGATCTTGTGCTACCTTTTAAC 57.431 37.500 0.00 0.00 0.00 2.01
2531 2987 7.308830 CCTTTTAACTAGTCTTGCTTGATTGCT 60.309 37.037 0.00 0.00 0.00 3.91
2538 2994 3.057736 GTCTTGCTTGATTGCTGATGTGT 60.058 43.478 0.00 0.00 0.00 3.72
2543 2999 3.191162 GCTTGATTGCTGATGTGTGGTTA 59.809 43.478 0.00 0.00 0.00 2.85
2553 3009 6.649141 TGCTGATGTGTGGTTAACTAGTAAAG 59.351 38.462 5.42 0.00 0.00 1.85
2579 3035 6.174049 ACTAAAGCTCCAGTCTCCAAAATAC 58.826 40.000 0.00 0.00 0.00 1.89
2589 3045 2.555199 CTCCAAAATACGGAGCTCCTG 58.445 52.381 29.73 23.79 43.50 3.86
2639 3321 2.264813 GCATTTGCATGTGTAAGGCAG 58.735 47.619 0.17 0.00 41.59 4.85
2676 3358 9.659830 CTTGCTATCCGTTGTATATTTAAAACC 57.340 33.333 0.00 0.00 0.00 3.27
2732 3414 6.601613 ACTTGTCTTACCTCACAAATTTCACA 59.398 34.615 0.00 0.00 32.16 3.58
2740 3422 6.048509 ACCTCACAAATTTCACATGGTTTTC 58.951 36.000 0.00 0.00 0.00 2.29
2802 3484 5.308014 TGTGATGACTATGCAGTTTCAGTT 58.692 37.500 0.00 0.00 34.21 3.16
2841 3525 3.255395 CAGCTCGATCATCCTGATACTGT 59.745 47.826 0.00 0.00 37.20 3.55
2893 3647 9.936329 AATTCCTGGAAATGTTATGTATAGGTT 57.064 29.630 14.03 0.00 0.00 3.50
2909 3663 8.812147 TGTATAGGTTTATGTTCATCGACATC 57.188 34.615 0.00 0.00 40.54 3.06
2910 3664 8.417884 TGTATAGGTTTATGTTCATCGACATCA 58.582 33.333 0.00 0.00 40.54 3.07
2911 3665 7.953158 ATAGGTTTATGTTCATCGACATCAG 57.047 36.000 0.00 0.00 40.54 2.90
2912 3666 5.734720 AGGTTTATGTTCATCGACATCAGT 58.265 37.500 0.00 0.00 40.54 3.41
2913 3667 6.873997 AGGTTTATGTTCATCGACATCAGTA 58.126 36.000 0.00 0.00 40.54 2.74
2914 3668 6.757010 AGGTTTATGTTCATCGACATCAGTAC 59.243 38.462 0.00 0.00 40.54 2.73
2915 3669 6.757010 GGTTTATGTTCATCGACATCAGTACT 59.243 38.462 0.00 0.00 40.54 2.73
2916 3670 7.919091 GGTTTATGTTCATCGACATCAGTACTA 59.081 37.037 0.00 0.00 40.54 1.82
2917 3671 8.744011 GTTTATGTTCATCGACATCAGTACTAC 58.256 37.037 0.00 0.00 40.54 2.73
2918 3672 6.701145 ATGTTCATCGACATCAGTACTACT 57.299 37.500 0.00 0.00 35.39 2.57
2919 3673 6.120378 TGTTCATCGACATCAGTACTACTC 57.880 41.667 0.00 0.00 0.00 2.59
2920 3674 5.066117 TGTTCATCGACATCAGTACTACTCC 59.934 44.000 0.00 0.00 0.00 3.85
2921 3675 4.135306 TCATCGACATCAGTACTACTCCC 58.865 47.826 0.00 0.00 0.00 4.30
2922 3676 3.928005 TCGACATCAGTACTACTCCCT 57.072 47.619 0.00 0.00 0.00 4.20
2923 3677 3.806380 TCGACATCAGTACTACTCCCTC 58.194 50.000 0.00 0.00 0.00 4.30
2924 3678 2.879646 CGACATCAGTACTACTCCCTCC 59.120 54.545 0.00 0.00 0.00 4.30
2925 3679 2.879646 GACATCAGTACTACTCCCTCCG 59.120 54.545 0.00 0.00 0.00 4.63
2926 3680 2.241685 ACATCAGTACTACTCCCTCCGT 59.758 50.000 0.00 0.00 0.00 4.69
2927 3681 2.706339 TCAGTACTACTCCCTCCGTC 57.294 55.000 0.00 0.00 0.00 4.79
2928 3682 1.211457 TCAGTACTACTCCCTCCGTCC 59.789 57.143 0.00 0.00 0.00 4.79
2929 3683 0.179936 AGTACTACTCCCTCCGTCCG 59.820 60.000 0.00 0.00 0.00 4.79
2930 3684 0.817229 GTACTACTCCCTCCGTCCGG 60.817 65.000 0.00 0.00 0.00 5.14
2931 3685 1.274703 TACTACTCCCTCCGTCCGGT 61.275 60.000 0.00 0.00 36.47 5.28
2932 3686 1.274703 ACTACTCCCTCCGTCCGGTA 61.275 60.000 0.00 0.00 36.47 4.02
2933 3687 0.107017 CTACTCCCTCCGTCCGGTAA 60.107 60.000 0.00 0.00 36.47 2.85
2934 3688 0.331278 TACTCCCTCCGTCCGGTAAA 59.669 55.000 0.00 0.00 36.47 2.01
2935 3689 0.969409 ACTCCCTCCGTCCGGTAAAG 60.969 60.000 0.00 2.74 36.47 1.85
2936 3690 0.682209 CTCCCTCCGTCCGGTAAAGA 60.682 60.000 0.00 0.00 36.47 2.52
2937 3691 0.682209 TCCCTCCGTCCGGTAAAGAG 60.682 60.000 0.00 3.95 36.47 2.85
2938 3692 0.969409 CCCTCCGTCCGGTAAAGAGT 60.969 60.000 0.00 0.00 36.47 3.24
2939 3693 0.172803 CCTCCGTCCGGTAAAGAGTG 59.827 60.000 0.00 0.00 36.47 3.51
2940 3694 0.886563 CTCCGTCCGGTAAAGAGTGT 59.113 55.000 0.00 0.00 36.47 3.55
2941 3695 2.086869 CTCCGTCCGGTAAAGAGTGTA 58.913 52.381 0.00 0.00 36.47 2.90
2942 3696 2.686915 CTCCGTCCGGTAAAGAGTGTAT 59.313 50.000 0.00 0.00 36.47 2.29
2943 3697 2.424601 TCCGTCCGGTAAAGAGTGTATG 59.575 50.000 0.00 0.00 36.47 2.39
2944 3698 2.165030 CCGTCCGGTAAAGAGTGTATGT 59.835 50.000 0.00 0.00 0.00 2.29
2945 3699 3.367703 CCGTCCGGTAAAGAGTGTATGTT 60.368 47.826 0.00 0.00 0.00 2.71
2946 3700 4.240096 CGTCCGGTAAAGAGTGTATGTTT 58.760 43.478 0.00 0.00 0.00 2.83
2947 3701 4.090930 CGTCCGGTAAAGAGTGTATGTTTG 59.909 45.833 0.00 0.00 0.00 2.93
2948 3702 4.390909 GTCCGGTAAAGAGTGTATGTTTGG 59.609 45.833 0.00 0.00 0.00 3.28
2949 3703 3.126343 CCGGTAAAGAGTGTATGTTTGGC 59.874 47.826 0.00 0.00 0.00 4.52
2950 3704 4.000988 CGGTAAAGAGTGTATGTTTGGCT 58.999 43.478 0.00 0.00 0.00 4.75
2951 3705 4.454504 CGGTAAAGAGTGTATGTTTGGCTT 59.545 41.667 0.00 0.00 0.00 4.35
2952 3706 5.390567 CGGTAAAGAGTGTATGTTTGGCTTC 60.391 44.000 0.00 0.00 0.00 3.86
2953 3707 5.472137 GGTAAAGAGTGTATGTTTGGCTTCA 59.528 40.000 0.00 0.00 0.00 3.02
2954 3708 6.016610 GGTAAAGAGTGTATGTTTGGCTTCAA 60.017 38.462 0.00 0.00 0.00 2.69
2955 3709 6.463995 AAAGAGTGTATGTTTGGCTTCAAA 57.536 33.333 0.00 0.00 37.97 2.69
2956 3710 6.463995 AAGAGTGTATGTTTGGCTTCAAAA 57.536 33.333 0.00 0.00 41.43 2.44
2957 3711 6.655078 AGAGTGTATGTTTGGCTTCAAAAT 57.345 33.333 0.00 0.00 41.43 1.82
2958 3712 7.054491 AGAGTGTATGTTTGGCTTCAAAATT 57.946 32.000 0.00 0.00 41.43 1.82
2959 3713 7.500141 AGAGTGTATGTTTGGCTTCAAAATTT 58.500 30.769 0.00 0.00 41.43 1.82
2960 3714 7.439056 AGAGTGTATGTTTGGCTTCAAAATTTG 59.561 33.333 0.00 0.00 41.43 2.32
2961 3715 7.047271 AGTGTATGTTTGGCTTCAAAATTTGT 58.953 30.769 5.56 0.00 41.43 2.83
2962 3716 7.224557 AGTGTATGTTTGGCTTCAAAATTTGTC 59.775 33.333 5.56 0.00 41.43 3.18
2963 3717 6.481644 TGTATGTTTGGCTTCAAAATTTGTCC 59.518 34.615 5.56 6.55 41.43 4.02
2964 3718 4.836825 TGTTTGGCTTCAAAATTTGTCCA 58.163 34.783 5.56 8.83 41.43 4.02
2965 3719 4.633565 TGTTTGGCTTCAAAATTTGTCCAC 59.366 37.500 5.56 2.99 41.43 4.02
2966 3720 4.478206 TTGGCTTCAAAATTTGTCCACA 57.522 36.364 5.56 0.00 0.00 4.17
2967 3721 4.478206 TGGCTTCAAAATTTGTCCACAA 57.522 36.364 5.56 0.00 0.00 3.33
2968 3722 5.707298 TTTGGCTTCAAAATTTGTCCACAAA 59.293 32.000 7.32 7.32 40.97 2.83
2969 3723 6.207417 TTTGGCTTCAAAATTTGTCCACAAAA 59.793 30.769 8.88 2.12 40.58 2.44
2970 3724 7.574592 TTTGGCTTCAAAATTTGTCCACAAAAG 60.575 33.333 8.88 2.64 40.58 2.27
2980 3734 6.431198 TTTGTCCACAAAAGAGTGTACTTC 57.569 37.500 2.29 0.00 42.26 3.01
2981 3735 5.353394 TGTCCACAAAAGAGTGTACTTCT 57.647 39.130 0.00 0.00 37.82 2.85
2982 3736 6.474140 TGTCCACAAAAGAGTGTACTTCTA 57.526 37.500 0.00 0.00 37.82 2.10
2983 3737 7.062749 TGTCCACAAAAGAGTGTACTTCTAT 57.937 36.000 0.00 0.00 37.82 1.98
2984 3738 7.152645 TGTCCACAAAAGAGTGTACTTCTATC 58.847 38.462 0.00 0.00 37.82 2.08
2985 3739 7.015292 TGTCCACAAAAGAGTGTACTTCTATCT 59.985 37.037 0.00 0.00 37.82 1.98
2986 3740 7.873505 GTCCACAAAAGAGTGTACTTCTATCTT 59.126 37.037 0.00 0.00 37.82 2.40
2987 3741 8.429641 TCCACAAAAGAGTGTACTTCTATCTTT 58.570 33.333 0.00 0.66 40.87 2.52
2988 3742 8.713271 CCACAAAAGAGTGTACTTCTATCTTTC 58.287 37.037 0.00 0.00 38.82 2.62
2989 3743 8.713271 CACAAAAGAGTGTACTTCTATCTTTCC 58.287 37.037 0.00 0.00 38.82 3.13
2990 3744 8.429641 ACAAAAGAGTGTACTTCTATCTTTCCA 58.570 33.333 0.00 0.00 38.82 3.53
2991 3745 9.273016 CAAAAGAGTGTACTTCTATCTTTCCAA 57.727 33.333 0.00 0.00 38.82 3.53
2993 3747 9.442047 AAAGAGTGTACTTCTATCTTTCCAATG 57.558 33.333 0.00 0.00 35.82 2.82
2994 3748 7.044798 AGAGTGTACTTCTATCTTTCCAATGC 58.955 38.462 0.00 0.00 0.00 3.56
2995 3749 6.711277 AGTGTACTTCTATCTTTCCAATGCA 58.289 36.000 0.00 0.00 0.00 3.96
2996 3750 6.595716 AGTGTACTTCTATCTTTCCAATGCAC 59.404 38.462 0.00 0.00 0.00 4.57
2997 3751 6.595716 GTGTACTTCTATCTTTCCAATGCACT 59.404 38.462 0.00 0.00 0.00 4.40
2998 3752 7.119846 GTGTACTTCTATCTTTCCAATGCACTT 59.880 37.037 0.00 0.00 0.00 3.16
2999 3753 7.665559 TGTACTTCTATCTTTCCAATGCACTTT 59.334 33.333 0.00 0.00 0.00 2.66
3000 3754 9.162764 GTACTTCTATCTTTCCAATGCACTTTA 57.837 33.333 0.00 0.00 0.00 1.85
3001 3755 8.635765 ACTTCTATCTTTCCAATGCACTTTAA 57.364 30.769 0.00 0.00 0.00 1.52
3002 3756 9.077885 ACTTCTATCTTTCCAATGCACTTTAAA 57.922 29.630 0.00 0.00 0.00 1.52
3003 3757 9.565213 CTTCTATCTTTCCAATGCACTTTAAAG 57.435 33.333 13.76 13.76 0.00 1.85
3004 3758 8.635765 TCTATCTTTCCAATGCACTTTAAAGT 57.364 30.769 15.22 15.22 40.60 2.66
3005 3759 9.733556 TCTATCTTTCCAATGCACTTTAAAGTA 57.266 29.630 20.15 6.90 37.08 2.24
3006 3760 9.994432 CTATCTTTCCAATGCACTTTAAAGTAG 57.006 33.333 20.15 14.94 37.08 2.57
3007 3761 8.635765 ATCTTTCCAATGCACTTTAAAGTAGA 57.364 30.769 20.15 15.37 37.08 2.59
3008 3762 8.458573 TCTTTCCAATGCACTTTAAAGTAGAA 57.541 30.769 20.15 10.15 37.08 2.10
3009 3763 8.908903 TCTTTCCAATGCACTTTAAAGTAGAAA 58.091 29.630 20.15 17.71 37.08 2.52
3010 3764 9.528018 CTTTCCAATGCACTTTAAAGTAGAAAA 57.472 29.630 20.15 12.12 37.08 2.29
3011 3765 9.877178 TTTCCAATGCACTTTAAAGTAGAAAAA 57.123 25.926 20.15 11.33 37.08 1.94
3033 3787 5.869753 AAAAATTCTCTCTCATCACACGG 57.130 39.130 0.00 0.00 0.00 4.94
3034 3788 2.593346 ATTCTCTCTCATCACACGGC 57.407 50.000 0.00 0.00 0.00 5.68
3035 3789 1.256812 TTCTCTCTCATCACACGGCA 58.743 50.000 0.00 0.00 0.00 5.69
3036 3790 1.256812 TCTCTCTCATCACACGGCAA 58.743 50.000 0.00 0.00 0.00 4.52
3037 3791 1.827344 TCTCTCTCATCACACGGCAAT 59.173 47.619 0.00 0.00 0.00 3.56
3038 3792 2.159184 TCTCTCTCATCACACGGCAATC 60.159 50.000 0.00 0.00 0.00 2.67
3039 3793 1.550072 TCTCTCATCACACGGCAATCA 59.450 47.619 0.00 0.00 0.00 2.57
3040 3794 2.028203 TCTCTCATCACACGGCAATCAA 60.028 45.455 0.00 0.00 0.00 2.57
3041 3795 2.349590 TCTCATCACACGGCAATCAAG 58.650 47.619 0.00 0.00 0.00 3.02
3042 3796 2.028203 TCTCATCACACGGCAATCAAGA 60.028 45.455 0.00 0.00 0.00 3.02
3043 3797 2.076100 TCATCACACGGCAATCAAGAC 58.924 47.619 0.00 0.00 0.00 3.01
3044 3798 2.079158 CATCACACGGCAATCAAGACT 58.921 47.619 0.00 0.00 0.00 3.24
3045 3799 3.056179 TCATCACACGGCAATCAAGACTA 60.056 43.478 0.00 0.00 0.00 2.59
3046 3800 3.394674 TCACACGGCAATCAAGACTAA 57.605 42.857 0.00 0.00 0.00 2.24
3047 3801 3.937814 TCACACGGCAATCAAGACTAAT 58.062 40.909 0.00 0.00 0.00 1.73
3048 3802 5.079689 TCACACGGCAATCAAGACTAATA 57.920 39.130 0.00 0.00 0.00 0.98
3049 3803 5.483811 TCACACGGCAATCAAGACTAATAA 58.516 37.500 0.00 0.00 0.00 1.40
3050 3804 5.350365 TCACACGGCAATCAAGACTAATAAC 59.650 40.000 0.00 0.00 0.00 1.89
3051 3805 5.121611 CACACGGCAATCAAGACTAATAACA 59.878 40.000 0.00 0.00 0.00 2.41
3052 3806 5.703592 ACACGGCAATCAAGACTAATAACAA 59.296 36.000 0.00 0.00 0.00 2.83
3053 3807 6.374333 ACACGGCAATCAAGACTAATAACAAT 59.626 34.615 0.00 0.00 0.00 2.71
3054 3808 6.907212 CACGGCAATCAAGACTAATAACAATC 59.093 38.462 0.00 0.00 0.00 2.67
3055 3809 6.823689 ACGGCAATCAAGACTAATAACAATCT 59.176 34.615 0.00 0.00 0.00 2.40
3056 3810 7.985184 ACGGCAATCAAGACTAATAACAATCTA 59.015 33.333 0.00 0.00 0.00 1.98
3057 3811 8.276325 CGGCAATCAAGACTAATAACAATCTAC 58.724 37.037 0.00 0.00 0.00 2.59
3058 3812 9.109393 GGCAATCAAGACTAATAACAATCTACA 57.891 33.333 0.00 0.00 0.00 2.74
3059 3813 9.922305 GCAATCAAGACTAATAACAATCTACAC 57.078 33.333 0.00 0.00 0.00 2.90
3063 3817 9.599866 TCAAGACTAATAACAATCTACACATGG 57.400 33.333 0.00 0.00 0.00 3.66
3064 3818 9.383519 CAAGACTAATAACAATCTACACATGGT 57.616 33.333 0.00 0.00 0.00 3.55
3065 3819 9.601217 AAGACTAATAACAATCTACACATGGTC 57.399 33.333 0.00 0.00 0.00 4.02
3066 3820 8.982723 AGACTAATAACAATCTACACATGGTCT 58.017 33.333 0.00 0.00 0.00 3.85
3067 3821 9.601217 GACTAATAACAATCTACACATGGTCTT 57.399 33.333 0.00 0.00 0.00 3.01
3068 3822 9.601217 ACTAATAACAATCTACACATGGTCTTC 57.399 33.333 0.00 0.00 0.00 2.87
3069 3823 9.823647 CTAATAACAATCTACACATGGTCTTCT 57.176 33.333 0.00 0.00 0.00 2.85
3074 3828 9.520515 AACAATCTACACATGGTCTTCTTAATT 57.479 29.630 0.00 0.00 0.00 1.40
3075 3829 9.520515 ACAATCTACACATGGTCTTCTTAATTT 57.479 29.630 0.00 0.00 0.00 1.82
3076 3830 9.994432 CAATCTACACATGGTCTTCTTAATTTC 57.006 33.333 0.00 0.00 0.00 2.17
3077 3831 9.965902 AATCTACACATGGTCTTCTTAATTTCT 57.034 29.630 0.00 0.00 0.00 2.52
3079 3833 9.871238 TCTACACATGGTCTTCTTAATTTCTAC 57.129 33.333 0.00 0.00 0.00 2.59
3080 3834 9.653287 CTACACATGGTCTTCTTAATTTCTACA 57.347 33.333 0.00 0.00 0.00 2.74
3082 3836 8.950210 ACACATGGTCTTCTTAATTTCTACATG 58.050 33.333 0.00 0.00 38.27 3.21
3083 3837 7.912250 CACATGGTCTTCTTAATTTCTACATGC 59.088 37.037 0.00 0.00 36.40 4.06
3084 3838 7.611467 ACATGGTCTTCTTAATTTCTACATGCA 59.389 33.333 0.00 0.00 36.40 3.96
3085 3839 7.377766 TGGTCTTCTTAATTTCTACATGCAC 57.622 36.000 0.00 0.00 0.00 4.57
3086 3840 7.168219 TGGTCTTCTTAATTTCTACATGCACT 58.832 34.615 0.00 0.00 0.00 4.40
3087 3841 7.665559 TGGTCTTCTTAATTTCTACATGCACTT 59.334 33.333 0.00 0.00 0.00 3.16
3088 3842 9.162764 GGTCTTCTTAATTTCTACATGCACTTA 57.837 33.333 0.00 0.00 0.00 2.24
3090 3844 8.883731 TCTTCTTAATTTCTACATGCACTTAGC 58.116 33.333 0.00 0.00 45.96 3.09
3091 3845 8.792830 TTCTTAATTTCTACATGCACTTAGCT 57.207 30.769 0.00 0.00 45.94 3.32
3092 3846 8.425577 TCTTAATTTCTACATGCACTTAGCTC 57.574 34.615 0.00 0.00 45.94 4.09
3093 3847 8.040727 TCTTAATTTCTACATGCACTTAGCTCA 58.959 33.333 0.00 0.00 45.94 4.26
3094 3848 8.737168 TTAATTTCTACATGCACTTAGCTCAT 57.263 30.769 0.00 0.00 45.94 2.90
3095 3849 7.636150 AATTTCTACATGCACTTAGCTCATT 57.364 32.000 0.00 0.00 45.94 2.57
3096 3850 6.426980 TTTCTACATGCACTTAGCTCATTG 57.573 37.500 0.00 0.00 45.94 2.82
3097 3851 4.445453 TCTACATGCACTTAGCTCATTGG 58.555 43.478 0.00 0.00 45.94 3.16
3098 3852 2.372264 ACATGCACTTAGCTCATTGGG 58.628 47.619 0.00 0.00 45.94 4.12
3099 3853 1.679680 CATGCACTTAGCTCATTGGGG 59.320 52.381 0.00 0.00 45.94 4.96
3100 3854 0.034186 TGCACTTAGCTCATTGGGGG 60.034 55.000 0.00 0.00 45.94 5.40
3101 3855 0.034089 GCACTTAGCTCATTGGGGGT 60.034 55.000 0.00 0.00 41.15 4.95
3102 3856 1.616994 GCACTTAGCTCATTGGGGGTT 60.617 52.381 0.00 0.00 41.15 4.11
3103 3857 2.094675 CACTTAGCTCATTGGGGGTTG 58.905 52.381 0.00 0.00 0.00 3.77
3104 3858 1.005924 ACTTAGCTCATTGGGGGTTGG 59.994 52.381 0.00 0.00 0.00 3.77
3105 3859 1.005924 CTTAGCTCATTGGGGGTTGGT 59.994 52.381 0.00 0.00 0.00 3.67
3106 3860 1.080638 TAGCTCATTGGGGGTTGGTT 58.919 50.000 0.00 0.00 0.00 3.67
3107 3861 1.080638 AGCTCATTGGGGGTTGGTTA 58.919 50.000 0.00 0.00 0.00 2.85
3108 3862 1.431243 AGCTCATTGGGGGTTGGTTAA 59.569 47.619 0.00 0.00 0.00 2.01
3109 3863 2.044353 AGCTCATTGGGGGTTGGTTAAT 59.956 45.455 0.00 0.00 0.00 1.40
3110 3864 2.837591 GCTCATTGGGGGTTGGTTAATT 59.162 45.455 0.00 0.00 0.00 1.40
3111 3865 4.027437 GCTCATTGGGGGTTGGTTAATTA 58.973 43.478 0.00 0.00 0.00 1.40
3112 3866 4.468153 GCTCATTGGGGGTTGGTTAATTAA 59.532 41.667 0.00 0.00 0.00 1.40
3113 3867 5.046231 GCTCATTGGGGGTTGGTTAATTAAA 60.046 40.000 0.00 0.00 0.00 1.52
3114 3868 6.613153 TCATTGGGGGTTGGTTAATTAAAG 57.387 37.500 0.00 0.00 0.00 1.85
3115 3869 6.323737 TCATTGGGGGTTGGTTAATTAAAGA 58.676 36.000 0.00 0.00 0.00 2.52
3116 3870 6.439058 TCATTGGGGGTTGGTTAATTAAAGAG 59.561 38.462 0.00 0.00 0.00 2.85
3117 3871 4.679331 TGGGGGTTGGTTAATTAAAGAGG 58.321 43.478 0.00 0.00 0.00 3.69
3118 3872 4.357399 TGGGGGTTGGTTAATTAAAGAGGA 59.643 41.667 0.00 0.00 0.00 3.71
3119 3873 4.954202 GGGGGTTGGTTAATTAAAGAGGAG 59.046 45.833 0.00 0.00 0.00 3.69
3120 3874 5.281349 GGGGGTTGGTTAATTAAAGAGGAGA 60.281 44.000 0.00 0.00 0.00 3.71
3121 3875 5.886474 GGGGTTGGTTAATTAAAGAGGAGAG 59.114 44.000 0.00 0.00 0.00 3.20
3122 3876 6.296836 GGGGTTGGTTAATTAAAGAGGAGAGA 60.297 42.308 0.00 0.00 0.00 3.10
3123 3877 6.824196 GGGTTGGTTAATTAAAGAGGAGAGAG 59.176 42.308 0.00 0.00 0.00 3.20
3124 3878 7.311109 GGGTTGGTTAATTAAAGAGGAGAGAGA 60.311 40.741 0.00 0.00 0.00 3.10
3125 3879 8.268605 GGTTGGTTAATTAAAGAGGAGAGAGAT 58.731 37.037 0.00 0.00 0.00 2.75
3126 3880 9.674068 GTTGGTTAATTAAAGAGGAGAGAGATT 57.326 33.333 0.00 0.00 0.00 2.40
3127 3881 9.672673 TTGGTTAATTAAAGAGGAGAGAGATTG 57.327 33.333 0.00 0.00 0.00 2.67
3128 3882 8.267894 TGGTTAATTAAAGAGGAGAGAGATTGG 58.732 37.037 0.00 0.00 0.00 3.16
3129 3883 8.268605 GGTTAATTAAAGAGGAGAGAGATTGGT 58.731 37.037 0.00 0.00 0.00 3.67
3130 3884 9.103861 GTTAATTAAAGAGGAGAGAGATTGGTG 57.896 37.037 0.00 0.00 0.00 4.17
3131 3885 6.882768 ATTAAAGAGGAGAGAGATTGGTGT 57.117 37.500 0.00 0.00 0.00 4.16
3132 3886 4.817318 AAAGAGGAGAGAGATTGGTGTC 57.183 45.455 0.00 0.00 0.00 3.67
3133 3887 3.756082 AGAGGAGAGAGATTGGTGTCT 57.244 47.619 0.00 0.00 0.00 3.41
3134 3888 4.059773 AGAGGAGAGAGATTGGTGTCTT 57.940 45.455 0.00 0.00 0.00 3.01
3135 3889 3.768757 AGAGGAGAGAGATTGGTGTCTTG 59.231 47.826 0.00 0.00 0.00 3.02
3136 3890 2.235898 AGGAGAGAGATTGGTGTCTTGC 59.764 50.000 0.00 0.00 0.00 4.01
3137 3891 2.027745 GGAGAGAGATTGGTGTCTTGCA 60.028 50.000 0.00 0.00 0.00 4.08
3138 3892 2.999355 GAGAGAGATTGGTGTCTTGCAC 59.001 50.000 0.00 0.00 46.97 4.57
3139 3893 2.636893 AGAGAGATTGGTGTCTTGCACT 59.363 45.455 0.00 0.00 46.86 4.40
3140 3894 3.072184 AGAGAGATTGGTGTCTTGCACTT 59.928 43.478 0.00 0.00 46.86 3.16
3141 3895 3.817647 GAGAGATTGGTGTCTTGCACTTT 59.182 43.478 0.00 0.00 46.86 2.66
3142 3896 4.210331 AGAGATTGGTGTCTTGCACTTTT 58.790 39.130 0.00 0.00 46.86 2.27
3143 3897 4.276926 AGAGATTGGTGTCTTGCACTTTTC 59.723 41.667 0.00 0.00 46.86 2.29
3144 3898 3.319122 AGATTGGTGTCTTGCACTTTTCC 59.681 43.478 0.00 0.00 46.86 3.13
3145 3899 2.136298 TGGTGTCTTGCACTTTTCCA 57.864 45.000 0.00 0.00 46.86 3.53
3146 3900 2.451490 TGGTGTCTTGCACTTTTCCAA 58.549 42.857 0.00 0.00 46.86 3.53
3147 3901 3.030291 TGGTGTCTTGCACTTTTCCAAT 58.970 40.909 0.00 0.00 46.86 3.16
3148 3902 3.181477 TGGTGTCTTGCACTTTTCCAATG 60.181 43.478 0.00 0.00 46.86 2.82
3149 3903 2.796593 GTGTCTTGCACTTTTCCAATGC 59.203 45.455 0.00 0.00 44.41 3.56
3178 3932 8.934023 TTTTACTTGACTCCATAATTTGTCCT 57.066 30.769 0.00 0.00 0.00 3.85
3182 3936 8.934023 ACTTGACTCCATAATTTGTCCTAAAA 57.066 30.769 0.00 0.00 0.00 1.52
3183 3937 9.533831 ACTTGACTCCATAATTTGTCCTAAAAT 57.466 29.630 0.00 0.00 0.00 1.82
3185 3939 9.753674 TTGACTCCATAATTTGTCCTAAAATCT 57.246 29.630 0.00 0.00 0.00 2.40
3186 3940 9.396022 TGACTCCATAATTTGTCCTAAAATCTC 57.604 33.333 0.00 0.00 0.00 2.75
3187 3941 9.620259 GACTCCATAATTTGTCCTAAAATCTCT 57.380 33.333 0.00 0.00 0.00 3.10
3195 3949 7.849804 TTTGTCCTAAAATCTCTAGATGTGC 57.150 36.000 0.00 0.00 34.49 4.57
3196 3950 6.544928 TGTCCTAAAATCTCTAGATGTGCA 57.455 37.500 0.00 0.00 34.49 4.57
3197 3951 6.341316 TGTCCTAAAATCTCTAGATGTGCAC 58.659 40.000 10.75 10.75 34.49 4.57
3198 3952 6.155221 TGTCCTAAAATCTCTAGATGTGCACT 59.845 38.462 19.41 3.19 34.49 4.40
3199 3953 6.699642 GTCCTAAAATCTCTAGATGTGCACTC 59.300 42.308 19.41 12.77 34.49 3.51
3200 3954 6.609212 TCCTAAAATCTCTAGATGTGCACTCT 59.391 38.462 19.41 18.90 34.49 3.24
3201 3955 7.124901 TCCTAAAATCTCTAGATGTGCACTCTT 59.875 37.037 19.41 5.62 34.49 2.85
3202 3956 7.437862 CCTAAAATCTCTAGATGTGCACTCTTC 59.562 40.741 19.41 12.12 34.49 2.87
3203 3957 5.929058 AATCTCTAGATGTGCACTCTTCA 57.071 39.130 19.41 0.00 34.49 3.02
3204 3958 4.710423 TCTCTAGATGTGCACTCTTCAC 57.290 45.455 19.41 3.21 35.14 3.18
3205 3959 3.445450 TCTCTAGATGTGCACTCTTCACC 59.555 47.826 19.41 0.00 33.71 4.02
3206 3960 2.164422 TCTAGATGTGCACTCTTCACCG 59.836 50.000 19.41 5.44 33.71 4.94
3207 3961 0.036952 AGATGTGCACTCTTCACCGG 60.037 55.000 19.41 0.00 33.71 5.28
3208 3962 0.037326 GATGTGCACTCTTCACCGGA 60.037 55.000 19.41 0.00 33.71 5.14
3209 3963 0.615331 ATGTGCACTCTTCACCGGAT 59.385 50.000 19.41 0.00 33.71 4.18
3210 3964 0.320683 TGTGCACTCTTCACCGGATG 60.321 55.000 19.41 2.48 33.71 3.51
3211 3965 0.037326 GTGCACTCTTCACCGGATGA 60.037 55.000 9.46 5.40 34.65 2.92
3212 3966 0.684535 TGCACTCTTCACCGGATGAA 59.315 50.000 9.46 13.67 45.39 2.57
3218 3972 3.082619 TTCACCGGATGAAGGGAGT 57.917 52.632 9.46 0.00 42.62 3.85
3219 3973 2.241281 TTCACCGGATGAAGGGAGTA 57.759 50.000 9.46 0.00 42.62 2.59
3220 3974 2.471815 TCACCGGATGAAGGGAGTAT 57.528 50.000 9.46 0.00 33.02 2.12
3221 3975 2.039418 TCACCGGATGAAGGGAGTATG 58.961 52.381 9.46 0.00 33.02 2.39
3222 3976 0.759346 ACCGGATGAAGGGAGTATGC 59.241 55.000 9.46 0.00 0.00 3.14
3223 3977 0.758734 CCGGATGAAGGGAGTATGCA 59.241 55.000 0.00 0.00 0.00 3.96
3224 3978 1.140852 CCGGATGAAGGGAGTATGCAA 59.859 52.381 0.00 0.00 0.00 4.08
3225 3979 2.213499 CGGATGAAGGGAGTATGCAAC 58.787 52.381 0.00 0.00 0.00 4.17
3226 3980 2.419990 CGGATGAAGGGAGTATGCAACA 60.420 50.000 0.00 0.00 0.00 3.33
3227 3981 3.620488 GGATGAAGGGAGTATGCAACAA 58.380 45.455 0.00 0.00 0.00 2.83
3228 3982 4.210331 GGATGAAGGGAGTATGCAACAAT 58.790 43.478 0.00 0.00 0.00 2.71
3229 3983 4.037208 GGATGAAGGGAGTATGCAACAATG 59.963 45.833 0.00 0.00 0.00 2.82
3230 3984 4.032960 TGAAGGGAGTATGCAACAATGT 57.967 40.909 0.00 0.00 0.00 2.71
3231 3985 4.406456 TGAAGGGAGTATGCAACAATGTT 58.594 39.130 0.00 0.00 0.00 2.71
3232 3986 4.832266 TGAAGGGAGTATGCAACAATGTTT 59.168 37.500 0.00 0.00 0.00 2.83
3233 3987 4.789012 AGGGAGTATGCAACAATGTTTG 57.211 40.909 0.00 0.00 0.00 2.93
3242 3996 3.441496 CAACAATGTTTGCTGGACTGT 57.559 42.857 0.00 0.00 0.00 3.55
3243 3997 4.566545 CAACAATGTTTGCTGGACTGTA 57.433 40.909 0.00 0.00 0.00 2.74
3244 3998 5.125100 CAACAATGTTTGCTGGACTGTAT 57.875 39.130 0.00 0.00 0.00 2.29
3245 3999 5.156355 CAACAATGTTTGCTGGACTGTATC 58.844 41.667 0.00 0.00 0.00 2.24
3246 4000 4.655963 ACAATGTTTGCTGGACTGTATCT 58.344 39.130 0.00 0.00 0.00 1.98
3247 4001 5.072741 ACAATGTTTGCTGGACTGTATCTT 58.927 37.500 0.00 0.00 0.00 2.40
3248 4002 5.182001 ACAATGTTTGCTGGACTGTATCTTC 59.818 40.000 0.00 0.00 0.00 2.87
3249 4003 3.325870 TGTTTGCTGGACTGTATCTTCG 58.674 45.455 0.00 0.00 0.00 3.79
3250 4004 3.006430 TGTTTGCTGGACTGTATCTTCGA 59.994 43.478 0.00 0.00 0.00 3.71
3301 4055 1.867233 CTGTATGTTCATACGGCTGGC 59.133 52.381 15.74 0.00 0.00 4.85
3615 4377 1.222115 GAGCAAGGCGAGTTCGTGTT 61.222 55.000 3.27 0.00 42.22 3.32
3616 4378 0.814010 AGCAAGGCGAGTTCGTGTTT 60.814 50.000 3.27 0.00 42.22 2.83
3636 4398 5.243730 TGTTTCCTTGGAAAATCAGATGGAC 59.756 40.000 15.46 2.27 0.00 4.02
3660 4422 8.094798 ACGAGCAACAAAATAATGTAGAAGAA 57.905 30.769 0.00 0.00 32.02 2.52
3668 4430 8.079809 ACAAAATAATGTAGAAGAACAAACCGG 58.920 33.333 0.00 0.00 32.02 5.28
3725 4487 3.126686 ACACCAGTTTGCAAAAATTGTGC 59.873 39.130 14.67 0.23 42.55 4.57
3826 4670 8.762481 AAGGTTCCTGTTAGAGTTACATTTTT 57.238 30.769 0.00 0.00 0.00 1.94
4168 5026 5.295540 GCTTCTGGATGTCTAAGGTCATTTC 59.704 44.000 0.00 0.00 0.00 2.17
4235 5095 5.869344 CACTCTACTATGTTTGCTGTTGCTA 59.131 40.000 0.00 0.00 40.48 3.49
4250 5110 2.808543 GTTGCTACACTCCAACTTCCAG 59.191 50.000 0.00 0.00 38.55 3.86
4273 5133 7.362834 CCAGGTGTTGCTTTCATGAATAACATA 60.363 37.037 24.06 6.06 37.46 2.29
4350 5214 5.287674 TGCTATTCTGCTCTTGATTAGCT 57.712 39.130 14.45 0.00 40.81 3.32
4557 5455 1.417288 GGCTGGAGAGATGGATGGCT 61.417 60.000 0.00 0.00 0.00 4.75
4725 5623 1.452108 GTTGATCCAGAAGGCCCGG 60.452 63.158 0.00 0.00 33.74 5.73
4856 5754 0.249741 CGTCTTTCGGGACTTGGTGT 60.250 55.000 0.00 0.00 34.38 4.16
4902 5800 0.109723 GGCCTGGACAGTTACAACCA 59.890 55.000 0.00 0.00 0.00 3.67
4963 5865 3.821033 GTCCAAACCTTGCATCTGTTACT 59.179 43.478 0.00 0.00 0.00 2.24
5070 5973 7.661437 TGTCTAGCATAAGTTTTTCTCATGTGT 59.339 33.333 0.00 0.00 0.00 3.72
5072 5975 6.639632 AGCATAAGTTTTTCTCATGTGTGT 57.360 33.333 0.00 0.00 0.00 3.72
5100 6003 7.036220 GCTATAACTACTCAGCAGTTCAGAAA 58.964 38.462 0.00 0.00 37.42 2.52
5141 6047 4.441792 CTGTTTGTTTCCTTTTTCCCCAG 58.558 43.478 0.00 0.00 0.00 4.45
5286 6192 2.699954 AGTGAATAAACCTGCGGTGAG 58.300 47.619 0.94 0.00 35.34 3.51
5360 6266 1.375523 GCCGGTTCCGTTGATCTGT 60.376 57.895 1.90 0.00 0.00 3.41
5363 6269 1.508632 CGGTTCCGTTGATCTGTTGT 58.491 50.000 2.82 0.00 0.00 3.32
5407 6314 0.034670 GACAAGCCATCTGAAGCCCT 60.035 55.000 0.00 0.00 0.00 5.19
5427 6334 3.129988 CCTATCTACCGTCGTCAAGGTTT 59.870 47.826 0.00 0.00 41.63 3.27
5432 6339 0.234884 CCGTCGTCAAGGTTTGAAGC 59.765 55.000 0.75 0.00 42.15 3.86
5433 6340 0.934496 CGTCGTCAAGGTTTGAAGCA 59.066 50.000 0.75 0.00 42.15 3.91
5434 6341 1.531149 CGTCGTCAAGGTTTGAAGCAT 59.469 47.619 0.75 0.00 42.15 3.79
5437 6344 1.689959 GTCAAGGTTTGAAGCATGCG 58.310 50.000 13.01 0.00 42.15 4.73
5438 6345 1.266718 GTCAAGGTTTGAAGCATGCGA 59.733 47.619 13.01 0.00 42.15 5.10
5439 6346 1.266718 TCAAGGTTTGAAGCATGCGAC 59.733 47.619 13.01 10.98 36.59 5.19
5440 6347 0.238289 AAGGTTTGAAGCATGCGACG 59.762 50.000 13.01 0.00 0.00 5.12
5441 6348 0.602638 AGGTTTGAAGCATGCGACGA 60.603 50.000 13.01 7.50 0.00 4.20
5653 6581 4.848357 AGTATGGACTCACATTTTCTGGG 58.152 43.478 0.00 0.00 32.39 4.45
5735 6670 1.760029 TCACTGGTGTGTGCTCTGTAA 59.240 47.619 0.53 0.00 44.14 2.41
5736 6671 2.368548 TCACTGGTGTGTGCTCTGTAAT 59.631 45.455 0.53 0.00 44.14 1.89
5737 6672 2.738846 CACTGGTGTGTGCTCTGTAATC 59.261 50.000 0.00 0.00 39.24 1.75
5738 6673 2.634940 ACTGGTGTGTGCTCTGTAATCT 59.365 45.455 0.00 0.00 0.00 2.40
5739 6674 2.998670 CTGGTGTGTGCTCTGTAATCTG 59.001 50.000 0.00 0.00 0.00 2.90
5740 6675 2.368548 TGGTGTGTGCTCTGTAATCTGT 59.631 45.455 0.00 0.00 0.00 3.41
5741 6676 3.576550 TGGTGTGTGCTCTGTAATCTGTA 59.423 43.478 0.00 0.00 0.00 2.74
5742 6677 3.927142 GGTGTGTGCTCTGTAATCTGTAC 59.073 47.826 0.00 0.00 0.00 2.90
5743 6678 3.927142 GTGTGTGCTCTGTAATCTGTACC 59.073 47.826 0.00 0.00 0.00 3.34
5744 6679 3.832490 TGTGTGCTCTGTAATCTGTACCT 59.168 43.478 0.00 0.00 0.00 3.08
5745 6680 4.283467 TGTGTGCTCTGTAATCTGTACCTT 59.717 41.667 0.00 0.00 0.00 3.50
5746 6681 4.627467 GTGTGCTCTGTAATCTGTACCTTG 59.373 45.833 0.00 0.00 0.00 3.61
5747 6682 3.619038 GTGCTCTGTAATCTGTACCTTGC 59.381 47.826 0.00 0.00 0.00 4.01
5748 6683 3.515502 TGCTCTGTAATCTGTACCTTGCT 59.484 43.478 0.00 0.00 0.00 3.91
5749 6684 4.020218 TGCTCTGTAATCTGTACCTTGCTT 60.020 41.667 0.00 0.00 0.00 3.91
5750 6685 4.938226 GCTCTGTAATCTGTACCTTGCTTT 59.062 41.667 0.00 0.00 0.00 3.51
5751 6686 5.412904 GCTCTGTAATCTGTACCTTGCTTTT 59.587 40.000 0.00 0.00 0.00 2.27
5752 6687 6.072452 GCTCTGTAATCTGTACCTTGCTTTTT 60.072 38.462 0.00 0.00 0.00 1.94
5778 6713 6.554334 TTTTGAGCAATTGTAGTCTGTACC 57.446 37.500 7.40 0.00 0.00 3.34
5779 6714 5.483685 TTGAGCAATTGTAGTCTGTACCT 57.516 39.130 7.40 0.00 0.00 3.08
5780 6715 5.483685 TGAGCAATTGTAGTCTGTACCTT 57.516 39.130 7.40 0.00 0.00 3.50
5781 6716 5.237815 TGAGCAATTGTAGTCTGTACCTTG 58.762 41.667 7.40 0.00 0.00 3.61
5782 6717 4.003648 AGCAATTGTAGTCTGTACCTTGC 58.996 43.478 7.40 9.72 36.34 4.01
5783 6718 4.003648 GCAATTGTAGTCTGTACCTTGCT 58.996 43.478 7.40 0.00 34.79 3.91
5784 6719 4.455877 GCAATTGTAGTCTGTACCTTGCTT 59.544 41.667 7.40 0.00 34.79 3.91
5785 6720 5.048713 GCAATTGTAGTCTGTACCTTGCTTT 60.049 40.000 7.40 0.00 34.79 3.51
5786 6721 6.515035 GCAATTGTAGTCTGTACCTTGCTTTT 60.515 38.462 7.40 0.00 34.79 2.27
5787 6722 7.425606 CAATTGTAGTCTGTACCTTGCTTTTT 58.574 34.615 0.00 0.00 0.00 1.94
5816 6751 3.258622 GGTTAGTCTGTACCTTGCTGAGT 59.741 47.826 0.00 0.00 0.00 3.41
5832 6767 2.601367 GTTGCTGGGCCATGGTGT 60.601 61.111 14.67 0.00 0.00 4.16
5841 6776 1.212935 GGGCCATGGTGTCTGAAGTAT 59.787 52.381 14.67 0.00 0.00 2.12
5842 6777 2.438021 GGGCCATGGTGTCTGAAGTATA 59.562 50.000 14.67 0.00 0.00 1.47
5845 6780 3.561725 GCCATGGTGTCTGAAGTATAAGC 59.438 47.826 14.67 0.00 0.00 3.09
5854 6811 9.118300 GGTGTCTGAAGTATAAGCTTAGTAGTA 57.882 37.037 12.54 0.00 0.00 1.82
5869 6826 8.030106 AGCTTAGTAGTAGACTTGCTTGTTAAG 58.970 37.037 0.00 0.00 41.20 1.85
5870 6827 7.275999 GCTTAGTAGTAGACTTGCTTGTTAAGG 59.724 40.741 0.00 0.00 39.81 2.69
5873 6830 4.319177 AGTAGACTTGCTTGTTAAGGCTG 58.681 43.478 3.46 0.00 43.20 4.85
5874 6831 1.882623 AGACTTGCTTGTTAAGGCTGC 59.117 47.619 0.00 0.00 41.83 5.25
5897 6854 1.303309 CCATCAGACGAAATGGGCTC 58.697 55.000 0.00 0.00 39.04 4.70
5928 6885 3.274095 AGAAAGCCAGCTCATTCTACC 57.726 47.619 5.06 0.00 30.69 3.18
5929 6886 2.092699 AGAAAGCCAGCTCATTCTACCC 60.093 50.000 5.06 0.00 30.69 3.69
5930 6887 1.289160 AAGCCAGCTCATTCTACCCA 58.711 50.000 0.00 0.00 0.00 4.51
5931 6888 1.516110 AGCCAGCTCATTCTACCCAT 58.484 50.000 0.00 0.00 0.00 4.00
5932 6889 1.849039 AGCCAGCTCATTCTACCCATT 59.151 47.619 0.00 0.00 0.00 3.16
6450 7418 0.676151 CTGCACCTCCTCAAGCCTTC 60.676 60.000 0.00 0.00 0.00 3.46
6456 7424 0.620121 CTCCTCAAGCCTTCCCTCCT 60.620 60.000 0.00 0.00 0.00 3.69
6464 7432 0.820226 GCCTTCCCTCCTGATTTTGC 59.180 55.000 0.00 0.00 0.00 3.68
6485 7453 3.607078 GCTGTTCGATCGAAGCTTTTTGT 60.607 43.478 29.79 0.00 34.49 2.83
6497 7465 5.220586 CGAAGCTTTTTGTGCGAGGAATATA 60.221 40.000 0.00 0.00 35.28 0.86
6498 7466 6.509418 AAGCTTTTTGTGCGAGGAATATAA 57.491 33.333 0.00 0.00 35.28 0.98
6505 7473 5.055642 TGTGCGAGGAATATAATCCGTAG 57.944 43.478 1.02 0.00 44.60 3.51
6525 7493 6.275335 CGTAGGACGAACCCTAATTGATTTA 58.725 40.000 0.00 0.00 46.05 1.40
6574 7547 4.431809 TGTTTGGCACAAAGAATTGTCTG 58.568 39.130 0.00 0.00 46.78 3.51
6594 7576 5.935206 GTCTGCTAGCTCCTTTTTACTTCTT 59.065 40.000 17.23 0.00 0.00 2.52
6595 7577 6.091577 GTCTGCTAGCTCCTTTTTACTTCTTC 59.908 42.308 17.23 0.00 0.00 2.87
6596 7578 6.014156 TCTGCTAGCTCCTTTTTACTTCTTCT 60.014 38.462 17.23 0.00 0.00 2.85
6597 7579 7.178628 TCTGCTAGCTCCTTTTTACTTCTTCTA 59.821 37.037 17.23 0.00 0.00 2.10
6598 7580 7.852263 TGCTAGCTCCTTTTTACTTCTTCTAT 58.148 34.615 17.23 0.00 0.00 1.98
6599 7581 8.322091 TGCTAGCTCCTTTTTACTTCTTCTATT 58.678 33.333 17.23 0.00 0.00 1.73
6600 7582 8.822855 GCTAGCTCCTTTTTACTTCTTCTATTC 58.177 37.037 7.70 0.00 0.00 1.75
6603 7585 9.878667 AGCTCCTTTTTACTTCTTCTATTCTAC 57.121 33.333 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.014858 CCTACTAGTACAGACCAAGGTCAA 58.985 45.833 20.52 3.73 46.76 3.18
1 2 4.043812 ACCTACTAGTACAGACCAAGGTCA 59.956 45.833 20.52 0.00 46.76 4.02
2 3 4.598022 ACCTACTAGTACAGACCAAGGTC 58.402 47.826 11.29 11.29 44.86 3.85
3 4 4.671596 ACCTACTAGTACAGACCAAGGT 57.328 45.455 0.00 0.96 0.00 3.50
4 5 5.753716 AGTACCTACTAGTACAGACCAAGG 58.246 45.833 0.00 0.27 44.19 3.61
5 6 7.444792 CCATAGTACCTACTAGTACAGACCAAG 59.555 44.444 0.00 0.00 44.19 3.61
6 7 7.092264 ACCATAGTACCTACTAGTACAGACCAA 60.092 40.741 0.00 0.00 44.19 3.67
7 8 6.388100 ACCATAGTACCTACTAGTACAGACCA 59.612 42.308 0.00 0.00 44.19 4.02
8 9 6.709846 CACCATAGTACCTACTAGTACAGACC 59.290 46.154 0.00 0.00 44.19 3.85
9 10 6.204495 GCACCATAGTACCTACTAGTACAGAC 59.796 46.154 0.00 0.00 44.19 3.51
10 11 6.126681 TGCACCATAGTACCTACTAGTACAGA 60.127 42.308 0.00 0.00 44.19 3.41
11 12 6.060136 TGCACCATAGTACCTACTAGTACAG 58.940 44.000 0.00 0.00 44.19 2.74
12 13 6.005066 TGCACCATAGTACCTACTAGTACA 57.995 41.667 0.00 0.00 44.19 2.90
13 14 5.472820 CCTGCACCATAGTACCTACTAGTAC 59.527 48.000 0.00 0.00 41.62 2.73
14 15 5.370584 TCCTGCACCATAGTACCTACTAGTA 59.629 44.000 1.89 1.89 41.62 1.82
15 16 4.167502 TCCTGCACCATAGTACCTACTAGT 59.832 45.833 0.00 0.00 41.62 2.57
16 17 4.519730 GTCCTGCACCATAGTACCTACTAG 59.480 50.000 0.00 0.00 41.62 2.57
17 18 4.079615 TGTCCTGCACCATAGTACCTACTA 60.080 45.833 0.00 0.00 42.43 1.82
18 19 3.297736 GTCCTGCACCATAGTACCTACT 58.702 50.000 0.00 0.00 40.24 2.57
19 20 3.028850 TGTCCTGCACCATAGTACCTAC 58.971 50.000 0.00 0.00 0.00 3.18
20 21 3.391799 TGTCCTGCACCATAGTACCTA 57.608 47.619 0.00 0.00 0.00 3.08
21 22 2.247699 TGTCCTGCACCATAGTACCT 57.752 50.000 0.00 0.00 0.00 3.08
22 23 4.377897 GTTATGTCCTGCACCATAGTACC 58.622 47.826 0.00 0.00 0.00 3.34
23 24 4.049186 CGTTATGTCCTGCACCATAGTAC 58.951 47.826 0.00 0.00 0.00 2.73
24 25 3.702548 ACGTTATGTCCTGCACCATAGTA 59.297 43.478 0.00 0.00 0.00 1.82
25 26 2.500098 ACGTTATGTCCTGCACCATAGT 59.500 45.455 0.00 0.00 0.00 2.12
26 27 2.866156 CACGTTATGTCCTGCACCATAG 59.134 50.000 0.00 0.00 0.00 2.23
27 28 2.235155 ACACGTTATGTCCTGCACCATA 59.765 45.455 0.00 0.00 36.54 2.74
28 29 1.003118 ACACGTTATGTCCTGCACCAT 59.997 47.619 0.00 0.00 36.54 3.55
29 30 0.394938 ACACGTTATGTCCTGCACCA 59.605 50.000 0.00 0.00 36.54 4.17
30 31 3.226884 ACACGTTATGTCCTGCACC 57.773 52.632 0.00 0.00 36.54 5.01
46 47 1.070105 GCGGTACAACAGTGGGACA 59.930 57.895 0.00 0.00 0.00 4.02
47 48 1.670083 GGCGGTACAACAGTGGGAC 60.670 63.158 0.00 0.00 0.00 4.46
48 49 2.745037 GGCGGTACAACAGTGGGA 59.255 61.111 0.00 0.00 0.00 4.37
49 50 2.359478 GGGCGGTACAACAGTGGG 60.359 66.667 0.00 0.00 0.00 4.61
53 54 1.750193 ATCATTGGGCGGTACAACAG 58.250 50.000 0.00 0.00 0.00 3.16
76 77 6.432162 AGCTGATTGACTATGAAGAAAAAGCA 59.568 34.615 0.00 0.00 0.00 3.91
77 78 6.850555 AGCTGATTGACTATGAAGAAAAAGC 58.149 36.000 0.00 0.00 0.00 3.51
108 109 8.447833 TGTATTTATTTTCTTGCGTTACTCCTG 58.552 33.333 0.00 0.00 0.00 3.86
117 118 7.273164 TCTGTTGCATGTATTTATTTTCTTGCG 59.727 33.333 0.00 0.00 34.98 4.85
118 119 8.464770 TCTGTTGCATGTATTTATTTTCTTGC 57.535 30.769 0.00 0.00 0.00 4.01
133 134 4.005650 AGTACACTGGATTCTGTTGCATG 58.994 43.478 0.00 0.00 0.00 4.06
141 142 1.065854 GCTGGCAGTACACTGGATTCT 60.066 52.381 17.16 0.00 43.94 2.40
156 157 1.520342 GGTGTCTCTCGATGCTGGC 60.520 63.158 0.00 0.00 0.00 4.85
180 181 0.317479 AAGAACCGCTACTCGCACTT 59.683 50.000 0.00 0.00 39.08 3.16
185 186 5.060200 GTGTAACTTTAAGAACCGCTACTCG 59.940 44.000 0.00 0.00 38.08 4.18
191 192 2.411935 GGCGTGTAACTTTAAGAACCGC 60.412 50.000 18.46 18.46 38.01 5.68
192 193 3.062042 AGGCGTGTAACTTTAAGAACCG 58.938 45.455 0.00 4.40 31.75 4.44
193 194 4.060205 TGAGGCGTGTAACTTTAAGAACC 58.940 43.478 0.00 0.00 31.75 3.62
195 196 5.543714 TCATGAGGCGTGTAACTTTAAGAA 58.456 37.500 0.00 0.00 31.75 2.52
196 197 5.142061 TCATGAGGCGTGTAACTTTAAGA 57.858 39.130 0.00 0.00 31.75 2.10
197 198 5.856126 TTCATGAGGCGTGTAACTTTAAG 57.144 39.130 0.00 0.00 31.75 1.85
204 209 3.994392 GAGAGTTTTCATGAGGCGTGTAA 59.006 43.478 0.00 0.00 0.00 2.41
211 216 4.020751 TCAGGACTGAGAGTTTTCATGAGG 60.021 45.833 0.00 0.00 34.14 3.86
217 222 5.504830 GCTTTTGTCAGGACTGAGAGTTTTC 60.505 44.000 1.56 0.00 40.75 2.29
239 244 4.702274 GTGGGGGTGGCATTGGCT 62.702 66.667 11.84 0.00 40.87 4.75
241 246 2.996734 GTGTGGGGGTGGCATTGG 60.997 66.667 0.00 0.00 0.00 3.16
242 247 2.203611 TGTGTGGGGGTGGCATTG 60.204 61.111 0.00 0.00 0.00 2.82
336 341 1.821136 CCCTCCAGCAAAATCTTGGAC 59.179 52.381 0.00 0.00 32.76 4.02
347 352 1.707989 TGTATTTCAACCCCTCCAGCA 59.292 47.619 0.00 0.00 0.00 4.41
351 356 2.629051 CGTCTGTATTTCAACCCCTCC 58.371 52.381 0.00 0.00 0.00 4.30
352 357 2.007608 GCGTCTGTATTTCAACCCCTC 58.992 52.381 0.00 0.00 0.00 4.30
353 358 1.674817 CGCGTCTGTATTTCAACCCCT 60.675 52.381 0.00 0.00 0.00 4.79
354 359 0.725117 CGCGTCTGTATTTCAACCCC 59.275 55.000 0.00 0.00 0.00 4.95
385 391 9.355215 CGTTAGATACACTGAAGAAAATACAGT 57.645 33.333 0.00 0.00 44.15 3.55
445 455 6.601613 ACGCCTGAGAATATTTGGTGATTAAA 59.398 34.615 14.05 0.00 33.09 1.52
462 472 3.435327 TGCAAACTATAAACACGCCTGAG 59.565 43.478 0.00 0.00 0.00 3.35
463 473 3.403968 TGCAAACTATAAACACGCCTGA 58.596 40.909 0.00 0.00 0.00 3.86
464 474 3.822594 TGCAAACTATAAACACGCCTG 57.177 42.857 0.00 0.00 0.00 4.85
469 479 5.793457 GGTCGTCAATGCAAACTATAAACAC 59.207 40.000 0.00 0.00 0.00 3.32
470 480 5.390040 CGGTCGTCAATGCAAACTATAAACA 60.390 40.000 0.00 0.00 0.00 2.83
475 485 2.006888 CCGGTCGTCAATGCAAACTAT 58.993 47.619 0.00 0.00 0.00 2.12
477 487 0.250124 TCCGGTCGTCAATGCAAACT 60.250 50.000 0.00 0.00 0.00 2.66
480 490 0.948623 CTGTCCGGTCGTCAATGCAA 60.949 55.000 0.00 0.00 0.00 4.08
488 498 1.899437 ATTGCCATCTGTCCGGTCGT 61.899 55.000 0.00 0.00 0.00 4.34
494 504 0.682209 ACTGCCATTGCCATCTGTCC 60.682 55.000 0.00 0.00 36.33 4.02
565 577 0.806492 GGTCGGCGTGATTCCTCTTC 60.806 60.000 6.85 0.00 0.00 2.87
617 953 1.499049 GTTTGAGACCGTGGAGTGAC 58.501 55.000 0.00 0.00 0.00 3.67
621 957 1.419374 CTTCGTTTGAGACCGTGGAG 58.581 55.000 0.00 0.00 0.00 3.86
637 973 1.909700 TGGATTTGGTCAGTGGCTTC 58.090 50.000 0.00 0.00 0.00 3.86
672 1008 0.396974 CCCCAGAGAGAGTCTCCCTG 60.397 65.000 21.55 21.55 44.42 4.45
677 1013 1.011595 TTAGCCCCCAGAGAGAGTCT 58.988 55.000 0.00 0.00 35.00 3.24
683 1035 7.472381 CGTTATTAATAGTTTAGCCCCCAGAGA 60.472 40.741 0.00 0.00 0.00 3.10
715 1080 1.273048 TGCTGCTGCTGGGTTTATTTG 59.727 47.619 17.00 0.00 40.48 2.32
716 1081 1.547372 CTGCTGCTGCTGGGTTTATTT 59.453 47.619 17.00 0.00 40.48 1.40
717 1082 1.180029 CTGCTGCTGCTGGGTTTATT 58.820 50.000 17.00 0.00 40.48 1.40
718 1083 1.318158 GCTGCTGCTGCTGGGTTTAT 61.318 55.000 22.10 0.00 40.48 1.40
719 1084 1.973281 GCTGCTGCTGCTGGGTTTA 60.973 57.895 22.10 0.00 40.48 2.01
785 1153 1.003580 TCATTCTTTTCTGGCTCGCCT 59.996 47.619 9.65 0.00 36.94 5.52
786 1154 1.399791 CTCATTCTTTTCTGGCTCGCC 59.600 52.381 0.00 0.00 0.00 5.54
787 1155 2.095053 GTCTCATTCTTTTCTGGCTCGC 59.905 50.000 0.00 0.00 0.00 5.03
788 1156 2.346847 CGTCTCATTCTTTTCTGGCTCG 59.653 50.000 0.00 0.00 0.00 5.03
789 1157 2.095053 GCGTCTCATTCTTTTCTGGCTC 59.905 50.000 0.00 0.00 0.00 4.70
792 1160 1.394917 CCGCGTCTCATTCTTTTCTGG 59.605 52.381 4.92 0.00 0.00 3.86
808 1176 5.238006 TCTGGGATTTTATTTTTACCGCG 57.762 39.130 0.00 0.00 0.00 6.46
814 1182 5.047377 TGCTCGCTTCTGGGATTTTATTTTT 60.047 36.000 0.00 0.00 34.59 1.94
820 1188 1.541588 GTTGCTCGCTTCTGGGATTTT 59.458 47.619 0.00 0.00 34.59 1.82
821 1189 1.168714 GTTGCTCGCTTCTGGGATTT 58.831 50.000 0.00 0.00 34.59 2.17
822 1190 0.036732 TGTTGCTCGCTTCTGGGATT 59.963 50.000 0.00 0.00 34.59 3.01
824 1192 0.603707 CTTGTTGCTCGCTTCTGGGA 60.604 55.000 0.00 0.00 0.00 4.37
825 1193 0.603707 TCTTGTTGCTCGCTTCTGGG 60.604 55.000 0.00 0.00 0.00 4.45
885 1254 2.502726 GCGGCGCTTTTTCTCAGC 60.503 61.111 26.86 0.00 0.00 4.26
917 1291 4.692228 ACCAGTGTGGCAAATAAACAAAG 58.308 39.130 0.00 0.00 42.67 2.77
943 1317 9.765795 ATAGGCAAGAAAATCATACAGTACTAC 57.234 33.333 0.00 0.00 0.00 2.73
954 1328 8.721478 GCGAGAATTATATAGGCAAGAAAATCA 58.279 33.333 0.00 0.00 0.00 2.57
955 1329 8.178313 GGCGAGAATTATATAGGCAAGAAAATC 58.822 37.037 0.00 0.00 0.00 2.17
965 1339 4.342665 GGAGGAGGGCGAGAATTATATAGG 59.657 50.000 0.00 0.00 0.00 2.57
1092 1466 2.816958 CTGCCTGCGTGCTACTGG 60.817 66.667 0.00 0.00 0.00 4.00
1096 1470 4.765449 CTGCCTGCCTGCGTGCTA 62.765 66.667 4.66 0.00 0.00 3.49
1160 1548 3.319198 GAGGGAAGGGTGTGGCGA 61.319 66.667 0.00 0.00 0.00 5.54
1161 1549 4.410400 GGAGGGAAGGGTGTGGCG 62.410 72.222 0.00 0.00 0.00 5.69
1162 1550 4.048470 GGGAGGGAAGGGTGTGGC 62.048 72.222 0.00 0.00 0.00 5.01
1163 1551 2.204151 AGGGAGGGAAGGGTGTGG 60.204 66.667 0.00 0.00 0.00 4.17
1164 1552 2.301738 GGAGGGAGGGAAGGGTGTG 61.302 68.421 0.00 0.00 0.00 3.82
1165 1553 2.125225 GGAGGGAGGGAAGGGTGT 59.875 66.667 0.00 0.00 0.00 4.16
1166 1554 2.692741 GGGAGGGAGGGAAGGGTG 60.693 72.222 0.00 0.00 0.00 4.61
1167 1555 2.882143 AGGGAGGGAGGGAAGGGT 60.882 66.667 0.00 0.00 0.00 4.34
1168 1556 2.040359 GAGGGAGGGAGGGAAGGG 60.040 72.222 0.00 0.00 0.00 3.95
1176 1564 3.680920 GAAGGGAGCGAGGGAGGGA 62.681 68.421 0.00 0.00 0.00 4.20
1177 1565 3.157949 GAAGGGAGCGAGGGAGGG 61.158 72.222 0.00 0.00 0.00 4.30
1185 1573 4.214327 GAGGAGGCGAAGGGAGCG 62.214 72.222 0.00 0.00 35.00 5.03
1188 1576 2.660064 GCTTGAGGAGGCGAAGGGA 61.660 63.158 0.00 0.00 0.00 4.20
1204 1617 3.483869 GAGATTGGGAGCCCGGCT 61.484 66.667 13.16 13.16 43.88 5.52
1208 1621 3.385749 TTCGCGAGATTGGGAGCCC 62.386 63.158 9.59 0.00 41.60 5.19
1209 1622 1.884926 CTTCGCGAGATTGGGAGCC 60.885 63.158 9.59 0.00 41.60 4.70
1210 1623 2.529619 GCTTCGCGAGATTGGGAGC 61.530 63.158 9.59 10.16 41.60 4.70
1336 1749 1.334869 GCGCAATCTCACATAAAGGGG 59.665 52.381 0.30 0.00 0.00 4.79
1337 1750 2.016318 TGCGCAATCTCACATAAAGGG 58.984 47.619 8.16 0.00 0.00 3.95
1340 1753 2.358957 AGCTGCGCAATCTCACATAAA 58.641 42.857 13.05 0.00 0.00 1.40
1359 1772 2.048877 CAAGCCCAAAGCCGCAAG 60.049 61.111 0.00 0.00 45.47 4.01
1371 1784 1.448985 TATTTCCGTCAGCACAAGCC 58.551 50.000 0.00 0.00 43.56 4.35
1389 1802 0.899720 ACCTCCAGTCGCGGAAATTA 59.100 50.000 6.13 0.00 33.65 1.40
1392 1808 1.301401 CAACCTCCAGTCGCGGAAA 60.301 57.895 6.13 0.00 33.65 3.13
1396 1812 2.954753 GCAACAACCTCCAGTCGCG 61.955 63.158 0.00 0.00 0.00 5.87
1468 1884 1.455849 CACCTTCCTCAGCCCAACA 59.544 57.895 0.00 0.00 0.00 3.33
1547 1963 0.711184 AGGTAGGTAGAGGTGGTGCT 59.289 55.000 0.00 0.00 0.00 4.40
1556 1972 4.262635 CGGAATCGTAGGTAGGTAGGTAGA 60.263 50.000 0.00 0.00 0.00 2.59
1559 1975 2.856222 CGGAATCGTAGGTAGGTAGGT 58.144 52.381 0.00 0.00 0.00 3.08
1560 1976 1.538950 GCGGAATCGTAGGTAGGTAGG 59.461 57.143 0.00 0.00 38.89 3.18
1617 2033 7.042335 CAGAGTAAGTAAGTAGACCAAATGGG 58.958 42.308 4.17 0.00 44.81 4.00
1620 2036 7.483580 AGCAGAGTAAGTAAGTAGACCAAAT 57.516 36.000 0.00 0.00 0.00 2.32
1638 2055 3.616956 TCCTTCCACATACAAGCAGAG 57.383 47.619 0.00 0.00 0.00 3.35
1647 2064 9.812347 AAAATATTGCTATGATCCTTCCACATA 57.188 29.630 0.00 0.00 0.00 2.29
1733 2166 4.081309 AGCATTGCATAAAGAAGCACCAAT 60.081 37.500 11.91 0.00 41.05 3.16
1773 2206 2.694628 AGATCTGCAACAAGCCAACAAA 59.305 40.909 0.00 0.00 44.83 2.83
1840 2273 7.898636 ACTAATTCCAGTCCCCAAAATTCAATA 59.101 33.333 0.00 0.00 0.00 1.90
1903 2345 9.877178 TTGTTCCAAATTTATAGTTGTTGTTGT 57.123 25.926 0.00 0.00 0.00 3.32
1934 2376 9.755122 TGGTGTAGCAATACTATACAGATATCT 57.245 33.333 0.00 0.00 42.98 1.98
1960 2402 5.422970 TGTTTATAATCAGGGACGGTGTACT 59.577 40.000 0.00 0.00 0.00 2.73
2042 2495 5.556355 TTCATAGCACATCAGCAAAGAAG 57.444 39.130 0.00 0.00 36.85 2.85
2044 2497 5.963176 TTTTCATAGCACATCAGCAAAGA 57.037 34.783 0.00 0.00 36.85 2.52
2070 2523 3.052036 CACAATGTGTAAGCAAACAGGC 58.948 45.455 5.00 0.00 0.00 4.85
2219 2673 1.661480 GCATGAAGGTGTGCTGCAA 59.339 52.632 2.77 0.00 38.30 4.08
2264 2718 2.121564 CTGTTTGAGGCAGTGGCACG 62.122 60.000 20.04 8.50 43.71 5.34
2330 2784 5.185442 GGTGAATACCAGTAGGGCTCTATAC 59.815 48.000 0.00 0.00 46.71 1.47
2367 2821 5.570589 GCAAGCAAGAAGTTAACTGCTAATG 59.429 40.000 16.81 12.98 29.75 1.90
2432 2886 6.211384 AGGCCCCTTGCATTTTATCAATATAC 59.789 38.462 0.00 0.00 43.89 1.47
2433 2887 6.211184 CAGGCCCCTTGCATTTTATCAATATA 59.789 38.462 0.00 0.00 43.89 0.86
2444 2898 1.660242 ATTTTCAGGCCCCTTGCATT 58.340 45.000 0.00 0.00 43.89 3.56
2455 2909 7.707774 AAACGTAACCATTGAAATTTTCAGG 57.292 32.000 11.41 12.43 41.38 3.86
2481 2937 6.823689 GGTAGCACAAGATCCAATTTCTCTAA 59.176 38.462 0.00 0.00 0.00 2.10
2497 2953 6.204108 GCAAGACTAGTTAAAAGGTAGCACAA 59.796 38.462 0.00 0.00 0.00 3.33
2506 2962 7.536622 CAGCAATCAAGCAAGACTAGTTAAAAG 59.463 37.037 0.00 0.00 36.85 2.27
2513 2969 4.634883 ACATCAGCAATCAAGCAAGACTAG 59.365 41.667 0.00 0.00 36.85 2.57
2531 2987 8.863086 AGTACTTTACTAGTTAACCACACATCA 58.137 33.333 0.00 0.00 37.23 3.07
2543 2999 8.419922 ACTGGAGCTTTAGTACTTTACTAGTT 57.580 34.615 0.00 0.00 41.84 2.24
2553 3009 4.803098 TTGGAGACTGGAGCTTTAGTAC 57.197 45.455 4.06 0.00 0.00 2.73
2579 3035 1.079543 CTTGGACACAGGAGCTCCG 60.080 63.158 26.95 22.44 42.08 4.63
2634 3316 1.141858 GCAAGCCTCCTAATACTGCCT 59.858 52.381 0.00 0.00 0.00 4.75
2639 3321 3.258622 ACGGATAGCAAGCCTCCTAATAC 59.741 47.826 8.93 0.00 0.00 1.89
2676 3358 2.061773 CTACTGACTGCACAAAGTCCG 58.938 52.381 1.77 0.00 45.03 4.79
2732 3414 9.705290 GTTATAGTTGTTGGAATTGAAAACCAT 57.295 29.630 0.00 0.00 33.56 3.55
2893 3647 8.221965 AGTAGTACTGATGTCGATGAACATAA 57.778 34.615 5.39 0.00 39.93 1.90
2904 3658 2.879646 CGGAGGGAGTAGTACTGATGTC 59.120 54.545 7.76 0.00 0.00 3.06
2905 3659 2.241685 ACGGAGGGAGTAGTACTGATGT 59.758 50.000 7.76 0.00 0.00 3.06
2906 3660 2.879646 GACGGAGGGAGTAGTACTGATG 59.120 54.545 7.76 0.00 0.00 3.07
2907 3661 2.158638 GGACGGAGGGAGTAGTACTGAT 60.159 54.545 7.76 0.00 0.00 2.90
2908 3662 1.211457 GGACGGAGGGAGTAGTACTGA 59.789 57.143 7.76 0.00 0.00 3.41
2909 3663 1.677942 GGACGGAGGGAGTAGTACTG 58.322 60.000 7.76 0.00 0.00 2.74
2910 3664 0.179936 CGGACGGAGGGAGTAGTACT 59.820 60.000 1.37 1.37 0.00 2.73
2911 3665 0.817229 CCGGACGGAGGGAGTAGTAC 60.817 65.000 4.40 0.00 37.50 2.73
2912 3666 1.274703 ACCGGACGGAGGGAGTAGTA 61.275 60.000 18.80 0.00 38.96 1.82
2913 3667 1.274703 TACCGGACGGAGGGAGTAGT 61.275 60.000 18.80 0.00 38.96 2.73
2914 3668 0.107017 TTACCGGACGGAGGGAGTAG 60.107 60.000 18.80 0.00 38.96 2.57
2915 3669 0.331278 TTTACCGGACGGAGGGAGTA 59.669 55.000 18.80 0.00 38.96 2.59
2916 3670 0.969409 CTTTACCGGACGGAGGGAGT 60.969 60.000 18.80 0.00 38.96 3.85
2917 3671 0.682209 TCTTTACCGGACGGAGGGAG 60.682 60.000 18.80 9.34 38.96 4.30
2918 3672 0.682209 CTCTTTACCGGACGGAGGGA 60.682 60.000 18.80 8.64 38.96 4.20
2919 3673 0.969409 ACTCTTTACCGGACGGAGGG 60.969 60.000 18.80 7.01 38.96 4.30
2920 3674 0.172803 CACTCTTTACCGGACGGAGG 59.827 60.000 18.80 4.47 38.96 4.30
2921 3675 0.886563 ACACTCTTTACCGGACGGAG 59.113 55.000 18.80 12.33 38.96 4.63
2922 3676 2.198827 TACACTCTTTACCGGACGGA 57.801 50.000 18.80 0.00 38.96 4.69
2923 3677 2.165030 ACATACACTCTTTACCGGACGG 59.835 50.000 9.46 9.56 42.03 4.79
2924 3678 3.498927 ACATACACTCTTTACCGGACG 57.501 47.619 9.46 0.00 0.00 4.79
2925 3679 4.390909 CCAAACATACACTCTTTACCGGAC 59.609 45.833 9.46 0.00 0.00 4.79
2926 3680 4.571919 CCAAACATACACTCTTTACCGGA 58.428 43.478 9.46 0.00 0.00 5.14
2927 3681 3.126343 GCCAAACATACACTCTTTACCGG 59.874 47.826 0.00 0.00 0.00 5.28
2928 3682 4.000988 AGCCAAACATACACTCTTTACCG 58.999 43.478 0.00 0.00 0.00 4.02
2929 3683 5.472137 TGAAGCCAAACATACACTCTTTACC 59.528 40.000 0.00 0.00 0.00 2.85
2930 3684 6.554334 TGAAGCCAAACATACACTCTTTAC 57.446 37.500 0.00 0.00 0.00 2.01
2931 3685 7.575414 TTTGAAGCCAAACATACACTCTTTA 57.425 32.000 0.00 0.00 37.36 1.85
2932 3686 6.463995 TTTGAAGCCAAACATACACTCTTT 57.536 33.333 0.00 0.00 37.36 2.52
2933 3687 6.463995 TTTTGAAGCCAAACATACACTCTT 57.536 33.333 0.00 0.00 41.54 2.85
2934 3688 6.655078 ATTTTGAAGCCAAACATACACTCT 57.345 33.333 0.00 0.00 41.54 3.24
2935 3689 7.224557 ACAAATTTTGAAGCCAAACATACACTC 59.775 33.333 15.81 0.00 41.54 3.51
2936 3690 7.047271 ACAAATTTTGAAGCCAAACATACACT 58.953 30.769 15.81 0.00 41.54 3.55
2937 3691 7.245419 ACAAATTTTGAAGCCAAACATACAC 57.755 32.000 15.81 0.00 41.54 2.90
2938 3692 6.481644 GGACAAATTTTGAAGCCAAACATACA 59.518 34.615 15.81 0.00 41.54 2.29
2939 3693 6.481644 TGGACAAATTTTGAAGCCAAACATAC 59.518 34.615 15.81 0.00 41.54 2.39
2940 3694 6.481644 GTGGACAAATTTTGAAGCCAAACATA 59.518 34.615 15.81 0.00 41.54 2.29
2941 3695 5.296531 GTGGACAAATTTTGAAGCCAAACAT 59.703 36.000 15.81 0.00 41.54 2.71
2942 3696 4.633565 GTGGACAAATTTTGAAGCCAAACA 59.366 37.500 15.81 0.89 41.54 2.83
2943 3697 4.633565 TGTGGACAAATTTTGAAGCCAAAC 59.366 37.500 15.81 9.11 41.54 2.93
2944 3698 4.836825 TGTGGACAAATTTTGAAGCCAAA 58.163 34.783 15.81 11.32 40.24 3.28
2945 3699 4.478206 TGTGGACAAATTTTGAAGCCAA 57.522 36.364 15.81 8.03 34.01 4.52
2946 3700 4.478206 TTGTGGACAAATTTTGAAGCCA 57.522 36.364 15.81 15.02 32.11 4.75
2947 3701 5.584251 TCTTTTGTGGACAAATTTTGAAGCC 59.416 36.000 15.81 12.95 44.30 4.35
2948 3702 6.313658 ACTCTTTTGTGGACAAATTTTGAAGC 59.686 34.615 15.81 4.84 44.30 3.86
2949 3703 7.331687 ACACTCTTTTGTGGACAAATTTTGAAG 59.668 33.333 15.81 7.05 44.30 3.02
2950 3704 7.158021 ACACTCTTTTGTGGACAAATTTTGAA 58.842 30.769 15.81 0.00 44.30 2.69
2951 3705 6.696411 ACACTCTTTTGTGGACAAATTTTGA 58.304 32.000 15.81 2.89 44.30 2.69
2952 3706 6.966435 ACACTCTTTTGTGGACAAATTTTG 57.034 33.333 7.59 7.59 44.30 2.44
2961 3715 7.540474 AGATAGAAGTACACTCTTTTGTGGA 57.460 36.000 3.13 0.00 41.84 4.02
2962 3716 8.608844 AAAGATAGAAGTACACTCTTTTGTGG 57.391 34.615 3.13 0.00 41.84 4.17
2963 3717 8.713271 GGAAAGATAGAAGTACACTCTTTTGTG 58.287 37.037 3.13 0.00 43.07 3.33
2964 3718 8.429641 TGGAAAGATAGAAGTACACTCTTTTGT 58.570 33.333 3.13 0.00 36.56 2.83
2965 3719 8.833231 TGGAAAGATAGAAGTACACTCTTTTG 57.167 34.615 3.13 0.00 36.56 2.44
2967 3721 9.442047 CATTGGAAAGATAGAAGTACACTCTTT 57.558 33.333 3.13 5.62 38.50 2.52
2968 3722 7.550906 GCATTGGAAAGATAGAAGTACACTCTT 59.449 37.037 3.13 0.00 0.00 2.85
2969 3723 7.044798 GCATTGGAAAGATAGAAGTACACTCT 58.955 38.462 0.00 0.00 0.00 3.24
2970 3724 6.818644 TGCATTGGAAAGATAGAAGTACACTC 59.181 38.462 0.00 0.00 0.00 3.51
2971 3725 6.595716 GTGCATTGGAAAGATAGAAGTACACT 59.404 38.462 0.00 0.00 0.00 3.55
2972 3726 6.595716 AGTGCATTGGAAAGATAGAAGTACAC 59.404 38.462 0.00 0.00 0.00 2.90
2973 3727 6.711277 AGTGCATTGGAAAGATAGAAGTACA 58.289 36.000 0.00 0.00 0.00 2.90
2974 3728 7.617041 AAGTGCATTGGAAAGATAGAAGTAC 57.383 36.000 0.00 0.00 0.00 2.73
2975 3729 9.733556 TTAAAGTGCATTGGAAAGATAGAAGTA 57.266 29.630 0.00 0.00 0.00 2.24
2976 3730 8.635765 TTAAAGTGCATTGGAAAGATAGAAGT 57.364 30.769 0.00 0.00 0.00 3.01
2977 3731 9.565213 CTTTAAAGTGCATTGGAAAGATAGAAG 57.435 33.333 7.07 0.00 31.03 2.85
2978 3732 9.077885 ACTTTAAAGTGCATTGGAAAGATAGAA 57.922 29.630 19.94 0.00 37.98 2.10
2979 3733 8.635765 ACTTTAAAGTGCATTGGAAAGATAGA 57.364 30.769 19.94 0.00 37.98 1.98
2980 3734 9.994432 CTACTTTAAAGTGCATTGGAAAGATAG 57.006 33.333 27.40 10.13 40.07 2.08
2981 3735 9.733556 TCTACTTTAAAGTGCATTGGAAAGATA 57.266 29.630 27.40 4.60 40.07 1.98
2982 3736 8.635765 TCTACTTTAAAGTGCATTGGAAAGAT 57.364 30.769 27.40 1.31 40.07 2.40
2983 3737 8.458573 TTCTACTTTAAAGTGCATTGGAAAGA 57.541 30.769 27.40 16.66 40.07 2.52
2984 3738 9.528018 TTTTCTACTTTAAAGTGCATTGGAAAG 57.472 29.630 27.40 14.85 40.07 2.62
2985 3739 9.877178 TTTTTCTACTTTAAAGTGCATTGGAAA 57.123 25.926 27.40 20.93 40.07 3.13
3011 3765 4.154918 GCCGTGTGATGAGAGAGAATTTTT 59.845 41.667 0.00 0.00 0.00 1.94
3012 3766 3.686726 GCCGTGTGATGAGAGAGAATTTT 59.313 43.478 0.00 0.00 0.00 1.82
3013 3767 3.265791 GCCGTGTGATGAGAGAGAATTT 58.734 45.455 0.00 0.00 0.00 1.82
3014 3768 2.234661 TGCCGTGTGATGAGAGAGAATT 59.765 45.455 0.00 0.00 0.00 2.17
3015 3769 1.827344 TGCCGTGTGATGAGAGAGAAT 59.173 47.619 0.00 0.00 0.00 2.40
3016 3770 1.256812 TGCCGTGTGATGAGAGAGAA 58.743 50.000 0.00 0.00 0.00 2.87
3017 3771 1.256812 TTGCCGTGTGATGAGAGAGA 58.743 50.000 0.00 0.00 0.00 3.10
3018 3772 2.200067 GATTGCCGTGTGATGAGAGAG 58.800 52.381 0.00 0.00 0.00 3.20
3019 3773 1.550072 TGATTGCCGTGTGATGAGAGA 59.450 47.619 0.00 0.00 0.00 3.10
3020 3774 2.014335 TGATTGCCGTGTGATGAGAG 57.986 50.000 0.00 0.00 0.00 3.20
3021 3775 2.028203 TCTTGATTGCCGTGTGATGAGA 60.028 45.455 0.00 0.00 0.00 3.27
3022 3776 2.094894 GTCTTGATTGCCGTGTGATGAG 59.905 50.000 0.00 0.00 0.00 2.90
3023 3777 2.076100 GTCTTGATTGCCGTGTGATGA 58.924 47.619 0.00 0.00 0.00 2.92
3024 3778 2.079158 AGTCTTGATTGCCGTGTGATG 58.921 47.619 0.00 0.00 0.00 3.07
3025 3779 2.479566 AGTCTTGATTGCCGTGTGAT 57.520 45.000 0.00 0.00 0.00 3.06
3026 3780 3.394674 TTAGTCTTGATTGCCGTGTGA 57.605 42.857 0.00 0.00 0.00 3.58
3027 3781 5.121611 TGTTATTAGTCTTGATTGCCGTGTG 59.878 40.000 0.00 0.00 0.00 3.82
3028 3782 5.242434 TGTTATTAGTCTTGATTGCCGTGT 58.758 37.500 0.00 0.00 0.00 4.49
3029 3783 5.794687 TGTTATTAGTCTTGATTGCCGTG 57.205 39.130 0.00 0.00 0.00 4.94
3030 3784 6.823689 AGATTGTTATTAGTCTTGATTGCCGT 59.176 34.615 0.00 0.00 0.00 5.68
3031 3785 7.251704 AGATTGTTATTAGTCTTGATTGCCG 57.748 36.000 0.00 0.00 0.00 5.69
3032 3786 9.109393 TGTAGATTGTTATTAGTCTTGATTGCC 57.891 33.333 0.00 0.00 0.00 4.52
3033 3787 9.922305 GTGTAGATTGTTATTAGTCTTGATTGC 57.078 33.333 0.00 0.00 0.00 3.56
3037 3791 9.599866 CCATGTGTAGATTGTTATTAGTCTTGA 57.400 33.333 0.00 0.00 0.00 3.02
3038 3792 9.383519 ACCATGTGTAGATTGTTATTAGTCTTG 57.616 33.333 0.00 0.00 0.00 3.02
3039 3793 9.601217 GACCATGTGTAGATTGTTATTAGTCTT 57.399 33.333 0.00 0.00 0.00 3.01
3040 3794 8.982723 AGACCATGTGTAGATTGTTATTAGTCT 58.017 33.333 0.00 0.00 0.00 3.24
3041 3795 9.601217 AAGACCATGTGTAGATTGTTATTAGTC 57.399 33.333 0.00 0.00 0.00 2.59
3042 3796 9.601217 GAAGACCATGTGTAGATTGTTATTAGT 57.399 33.333 0.00 0.00 0.00 2.24
3043 3797 9.823647 AGAAGACCATGTGTAGATTGTTATTAG 57.176 33.333 0.00 0.00 0.00 1.73
3048 3802 9.520515 AATTAAGAAGACCATGTGTAGATTGTT 57.479 29.630 0.00 0.00 0.00 2.83
3049 3803 9.520515 AAATTAAGAAGACCATGTGTAGATTGT 57.479 29.630 0.00 0.00 0.00 2.71
3050 3804 9.994432 GAAATTAAGAAGACCATGTGTAGATTG 57.006 33.333 0.00 0.00 0.00 2.67
3051 3805 9.965902 AGAAATTAAGAAGACCATGTGTAGATT 57.034 29.630 0.00 0.00 0.00 2.40
3053 3807 9.871238 GTAGAAATTAAGAAGACCATGTGTAGA 57.129 33.333 0.00 0.00 0.00 2.59
3054 3808 9.653287 TGTAGAAATTAAGAAGACCATGTGTAG 57.347 33.333 0.00 0.00 0.00 2.74
3056 3810 8.950210 CATGTAGAAATTAAGAAGACCATGTGT 58.050 33.333 0.00 0.00 0.00 3.72
3057 3811 7.912250 GCATGTAGAAATTAAGAAGACCATGTG 59.088 37.037 0.00 0.00 0.00 3.21
3058 3812 7.611467 TGCATGTAGAAATTAAGAAGACCATGT 59.389 33.333 0.00 0.00 0.00 3.21
3059 3813 7.912250 GTGCATGTAGAAATTAAGAAGACCATG 59.088 37.037 0.00 0.00 0.00 3.66
3060 3814 7.831193 AGTGCATGTAGAAATTAAGAAGACCAT 59.169 33.333 0.00 0.00 0.00 3.55
3061 3815 7.168219 AGTGCATGTAGAAATTAAGAAGACCA 58.832 34.615 0.00 0.00 0.00 4.02
3062 3816 7.617041 AGTGCATGTAGAAATTAAGAAGACC 57.383 36.000 0.00 0.00 0.00 3.85
3064 3818 8.883731 GCTAAGTGCATGTAGAAATTAAGAAGA 58.116 33.333 10.04 0.00 42.31 2.87
3065 3819 8.887717 AGCTAAGTGCATGTAGAAATTAAGAAG 58.112 33.333 10.04 0.00 45.94 2.85
3066 3820 8.792830 AGCTAAGTGCATGTAGAAATTAAGAA 57.207 30.769 10.04 0.00 45.94 2.52
3067 3821 8.040727 TGAGCTAAGTGCATGTAGAAATTAAGA 58.959 33.333 10.04 0.00 45.94 2.10
3068 3822 8.201554 TGAGCTAAGTGCATGTAGAAATTAAG 57.798 34.615 10.04 0.00 45.94 1.85
3069 3823 8.737168 ATGAGCTAAGTGCATGTAGAAATTAA 57.263 30.769 10.04 0.00 45.94 1.40
3070 3824 8.615211 CAATGAGCTAAGTGCATGTAGAAATTA 58.385 33.333 10.04 0.00 45.94 1.40
3071 3825 7.415989 CCAATGAGCTAAGTGCATGTAGAAATT 60.416 37.037 10.04 4.39 45.94 1.82
3072 3826 6.039047 CCAATGAGCTAAGTGCATGTAGAAAT 59.961 38.462 10.04 0.00 45.94 2.17
3073 3827 5.355071 CCAATGAGCTAAGTGCATGTAGAAA 59.645 40.000 10.04 0.00 45.94 2.52
3074 3828 4.877823 CCAATGAGCTAAGTGCATGTAGAA 59.122 41.667 10.04 0.00 45.94 2.10
3075 3829 4.445453 CCAATGAGCTAAGTGCATGTAGA 58.555 43.478 10.04 0.00 45.94 2.59
3076 3830 3.562973 CCCAATGAGCTAAGTGCATGTAG 59.437 47.826 0.00 0.00 45.94 2.74
3077 3831 3.544684 CCCAATGAGCTAAGTGCATGTA 58.455 45.455 0.00 0.00 45.94 2.29
3078 3832 2.372264 CCCAATGAGCTAAGTGCATGT 58.628 47.619 0.00 0.00 45.94 3.21
3079 3833 1.679680 CCCCAATGAGCTAAGTGCATG 59.320 52.381 0.00 0.00 45.94 4.06
3080 3834 1.410648 CCCCCAATGAGCTAAGTGCAT 60.411 52.381 0.00 0.00 45.94 3.96
3081 3835 0.034186 CCCCCAATGAGCTAAGTGCA 60.034 55.000 0.00 0.00 45.94 4.57
3082 3836 0.034089 ACCCCCAATGAGCTAAGTGC 60.034 55.000 0.00 0.00 43.29 4.40
3083 3837 2.094675 CAACCCCCAATGAGCTAAGTG 58.905 52.381 0.00 0.00 0.00 3.16
3084 3838 1.005924 CCAACCCCCAATGAGCTAAGT 59.994 52.381 0.00 0.00 0.00 2.24
3085 3839 1.005924 ACCAACCCCCAATGAGCTAAG 59.994 52.381 0.00 0.00 0.00 2.18
3086 3840 1.080638 ACCAACCCCCAATGAGCTAA 58.919 50.000 0.00 0.00 0.00 3.09
3087 3841 1.080638 AACCAACCCCCAATGAGCTA 58.919 50.000 0.00 0.00 0.00 3.32
3088 3842 1.080638 TAACCAACCCCCAATGAGCT 58.919 50.000 0.00 0.00 0.00 4.09
3089 3843 1.931635 TTAACCAACCCCCAATGAGC 58.068 50.000 0.00 0.00 0.00 4.26
3090 3844 6.439058 TCTTTAATTAACCAACCCCCAATGAG 59.561 38.462 0.00 0.00 0.00 2.90
3091 3845 6.323737 TCTTTAATTAACCAACCCCCAATGA 58.676 36.000 0.00 0.00 0.00 2.57
3092 3846 6.351796 CCTCTTTAATTAACCAACCCCCAATG 60.352 42.308 0.00 0.00 0.00 2.82
3093 3847 5.724370 CCTCTTTAATTAACCAACCCCCAAT 59.276 40.000 0.00 0.00 0.00 3.16
3094 3848 5.088026 CCTCTTTAATTAACCAACCCCCAA 58.912 41.667 0.00 0.00 0.00 4.12
3095 3849 4.357399 TCCTCTTTAATTAACCAACCCCCA 59.643 41.667 0.00 0.00 0.00 4.96
3096 3850 4.938028 TCCTCTTTAATTAACCAACCCCC 58.062 43.478 0.00 0.00 0.00 5.40
3097 3851 5.823312 TCTCCTCTTTAATTAACCAACCCC 58.177 41.667 0.00 0.00 0.00 4.95
3098 3852 6.718294 TCTCTCCTCTTTAATTAACCAACCC 58.282 40.000 0.00 0.00 0.00 4.11
3099 3853 7.621796 TCTCTCTCCTCTTTAATTAACCAACC 58.378 38.462 0.00 0.00 0.00 3.77
3100 3854 9.674068 AATCTCTCTCCTCTTTAATTAACCAAC 57.326 33.333 0.00 0.00 0.00 3.77
3101 3855 9.672673 CAATCTCTCTCCTCTTTAATTAACCAA 57.327 33.333 0.00 0.00 0.00 3.67
3102 3856 8.267894 CCAATCTCTCTCCTCTTTAATTAACCA 58.732 37.037 0.00 0.00 0.00 3.67
3103 3857 8.268605 ACCAATCTCTCTCCTCTTTAATTAACC 58.731 37.037 0.00 0.00 0.00 2.85
3104 3858 9.103861 CACCAATCTCTCTCCTCTTTAATTAAC 57.896 37.037 0.00 0.00 0.00 2.01
3105 3859 8.826765 ACACCAATCTCTCTCCTCTTTAATTAA 58.173 33.333 0.00 0.00 0.00 1.40
3106 3860 8.380742 ACACCAATCTCTCTCCTCTTTAATTA 57.619 34.615 0.00 0.00 0.00 1.40
3107 3861 7.181845 AGACACCAATCTCTCTCCTCTTTAATT 59.818 37.037 0.00 0.00 0.00 1.40
3108 3862 6.671779 AGACACCAATCTCTCTCCTCTTTAAT 59.328 38.462 0.00 0.00 0.00 1.40
3109 3863 6.019748 AGACACCAATCTCTCTCCTCTTTAA 58.980 40.000 0.00 0.00 0.00 1.52
3110 3864 5.584913 AGACACCAATCTCTCTCCTCTTTA 58.415 41.667 0.00 0.00 0.00 1.85
3111 3865 4.424842 AGACACCAATCTCTCTCCTCTTT 58.575 43.478 0.00 0.00 0.00 2.52
3112 3866 4.059773 AGACACCAATCTCTCTCCTCTT 57.940 45.455 0.00 0.00 0.00 2.85
3113 3867 3.756082 AGACACCAATCTCTCTCCTCT 57.244 47.619 0.00 0.00 0.00 3.69
3114 3868 3.678529 GCAAGACACCAATCTCTCTCCTC 60.679 52.174 0.00 0.00 0.00 3.71
3115 3869 2.235898 GCAAGACACCAATCTCTCTCCT 59.764 50.000 0.00 0.00 0.00 3.69
3116 3870 2.027745 TGCAAGACACCAATCTCTCTCC 60.028 50.000 0.00 0.00 0.00 3.71
3117 3871 2.999355 GTGCAAGACACCAATCTCTCTC 59.001 50.000 0.00 0.00 44.02 3.20
3118 3872 3.051081 GTGCAAGACACCAATCTCTCT 57.949 47.619 0.00 0.00 44.02 3.10
3129 3883 2.429971 TGCATTGGAAAAGTGCAAGACA 59.570 40.909 0.00 0.00 44.99 3.41
3130 3884 3.096489 TGCATTGGAAAAGTGCAAGAC 57.904 42.857 0.00 0.00 44.99 3.01
3152 3906 9.362151 AGGACAAATTATGGAGTCAAGTAAAAA 57.638 29.630 0.00 0.00 32.79 1.94
3153 3907 8.934023 AGGACAAATTATGGAGTCAAGTAAAA 57.066 30.769 0.00 0.00 32.79 1.52
3157 3911 8.934023 TTTTAGGACAAATTATGGAGTCAAGT 57.066 30.769 0.00 0.00 32.79 3.16
3159 3913 9.753674 AGATTTTAGGACAAATTATGGAGTCAA 57.246 29.630 0.00 0.00 32.79 3.18
3160 3914 9.396022 GAGATTTTAGGACAAATTATGGAGTCA 57.604 33.333 0.00 0.00 32.79 3.41
3161 3915 9.620259 AGAGATTTTAGGACAAATTATGGAGTC 57.380 33.333 0.00 0.00 0.00 3.36
3169 3923 8.897752 GCACATCTAGAGATTTTAGGACAAATT 58.102 33.333 0.00 0.00 31.21 1.82
3170 3924 8.049117 TGCACATCTAGAGATTTTAGGACAAAT 58.951 33.333 0.00 0.00 31.21 2.32
3171 3925 7.334421 GTGCACATCTAGAGATTTTAGGACAAA 59.666 37.037 13.17 0.00 31.21 2.83
3172 3926 6.818644 GTGCACATCTAGAGATTTTAGGACAA 59.181 38.462 13.17 0.00 31.21 3.18
3173 3927 6.155221 AGTGCACATCTAGAGATTTTAGGACA 59.845 38.462 21.04 0.00 31.21 4.02
3174 3928 6.578023 AGTGCACATCTAGAGATTTTAGGAC 58.422 40.000 21.04 0.00 31.21 3.85
3175 3929 6.609212 AGAGTGCACATCTAGAGATTTTAGGA 59.391 38.462 21.04 0.00 31.21 2.94
3176 3930 6.815089 AGAGTGCACATCTAGAGATTTTAGG 58.185 40.000 21.04 0.00 31.21 2.69
3177 3931 7.978414 TGAAGAGTGCACATCTAGAGATTTTAG 59.022 37.037 21.04 0.00 31.21 1.85
3178 3932 7.761704 GTGAAGAGTGCACATCTAGAGATTTTA 59.238 37.037 21.04 0.00 36.31 1.52
3179 3933 6.593382 GTGAAGAGTGCACATCTAGAGATTTT 59.407 38.462 21.04 1.60 36.31 1.82
3180 3934 6.105333 GTGAAGAGTGCACATCTAGAGATTT 58.895 40.000 21.04 2.29 36.31 2.17
3181 3935 5.395103 GGTGAAGAGTGCACATCTAGAGATT 60.395 44.000 21.04 2.97 37.99 2.40
3182 3936 4.099266 GGTGAAGAGTGCACATCTAGAGAT 59.901 45.833 21.04 3.65 37.99 2.75
3183 3937 3.445450 GGTGAAGAGTGCACATCTAGAGA 59.555 47.826 21.04 1.95 37.99 3.10
3184 3938 3.733380 CGGTGAAGAGTGCACATCTAGAG 60.733 52.174 21.04 0.00 37.99 2.43
3185 3939 2.164422 CGGTGAAGAGTGCACATCTAGA 59.836 50.000 21.04 0.00 37.99 2.43
3186 3940 2.534298 CGGTGAAGAGTGCACATCTAG 58.466 52.381 21.04 6.30 37.99 2.43
3187 3941 1.204704 CCGGTGAAGAGTGCACATCTA 59.795 52.381 21.04 2.48 37.99 1.98
3188 3942 0.036952 CCGGTGAAGAGTGCACATCT 60.037 55.000 21.04 15.46 37.99 2.90
3189 3943 0.037326 TCCGGTGAAGAGTGCACATC 60.037 55.000 21.04 14.35 37.99 3.06
3190 3944 0.615331 ATCCGGTGAAGAGTGCACAT 59.385 50.000 21.04 3.86 37.99 3.21
3191 3945 0.320683 CATCCGGTGAAGAGTGCACA 60.321 55.000 21.04 0.00 37.99 4.57
3192 3946 0.037326 TCATCCGGTGAAGAGTGCAC 60.037 55.000 9.40 9.40 32.78 4.57
3193 3947 0.684535 TTCATCCGGTGAAGAGTGCA 59.315 50.000 13.34 0.00 41.79 4.57
3194 3948 3.532896 TTCATCCGGTGAAGAGTGC 57.467 52.632 13.34 0.00 41.79 4.40
3200 3954 2.241281 TACTCCCTTCATCCGGTGAA 57.759 50.000 15.60 15.60 44.36 3.18
3201 3955 2.039418 CATACTCCCTTCATCCGGTGA 58.961 52.381 0.00 1.42 34.25 4.02
3202 3956 1.541233 GCATACTCCCTTCATCCGGTG 60.541 57.143 0.00 0.00 0.00 4.94
3203 3957 0.759346 GCATACTCCCTTCATCCGGT 59.241 55.000 0.00 0.00 0.00 5.28
3204 3958 0.758734 TGCATACTCCCTTCATCCGG 59.241 55.000 0.00 0.00 0.00 5.14
3205 3959 2.213499 GTTGCATACTCCCTTCATCCG 58.787 52.381 0.00 0.00 0.00 4.18
3206 3960 3.281727 TGTTGCATACTCCCTTCATCC 57.718 47.619 0.00 0.00 0.00 3.51
3207 3961 4.641989 ACATTGTTGCATACTCCCTTCATC 59.358 41.667 0.00 0.00 0.00 2.92
3208 3962 4.603131 ACATTGTTGCATACTCCCTTCAT 58.397 39.130 0.00 0.00 0.00 2.57
3209 3963 4.032960 ACATTGTTGCATACTCCCTTCA 57.967 40.909 0.00 0.00 0.00 3.02
3210 3964 5.163513 CAAACATTGTTGCATACTCCCTTC 58.836 41.667 2.13 0.00 0.00 3.46
3211 3965 5.138125 CAAACATTGTTGCATACTCCCTT 57.862 39.130 2.13 0.00 0.00 3.95
3212 3966 4.789012 CAAACATTGTTGCATACTCCCT 57.211 40.909 2.13 0.00 0.00 4.20
3222 3976 3.441496 ACAGTCCAGCAAACATTGTTG 57.559 42.857 2.13 0.59 40.96 3.33
3223 3977 5.072741 AGATACAGTCCAGCAAACATTGTT 58.927 37.500 0.00 0.00 0.00 2.83
3224 3978 4.655963 AGATACAGTCCAGCAAACATTGT 58.344 39.130 0.00 0.00 0.00 2.71
3225 3979 5.633830 AAGATACAGTCCAGCAAACATTG 57.366 39.130 0.00 0.00 0.00 2.82
3226 3980 4.393062 CGAAGATACAGTCCAGCAAACATT 59.607 41.667 0.00 0.00 0.00 2.71
3227 3981 3.935203 CGAAGATACAGTCCAGCAAACAT 59.065 43.478 0.00 0.00 0.00 2.71
3228 3982 3.006430 TCGAAGATACAGTCCAGCAAACA 59.994 43.478 0.00 0.00 0.00 2.83
3229 3983 3.368236 GTCGAAGATACAGTCCAGCAAAC 59.632 47.826 0.00 0.00 40.67 2.93
3230 3984 3.006430 TGTCGAAGATACAGTCCAGCAAA 59.994 43.478 0.00 0.00 40.67 3.68
3231 3985 2.560981 TGTCGAAGATACAGTCCAGCAA 59.439 45.455 0.00 0.00 40.67 3.91
3232 3986 2.167662 TGTCGAAGATACAGTCCAGCA 58.832 47.619 0.00 0.00 40.67 4.41
3233 3987 2.941453 TGTCGAAGATACAGTCCAGC 57.059 50.000 0.00 0.00 40.67 4.85
3234 3988 4.097135 ACTGATGTCGAAGATACAGTCCAG 59.903 45.833 0.00 0.00 40.57 3.86
3235 3989 4.017126 ACTGATGTCGAAGATACAGTCCA 58.983 43.478 0.00 0.00 40.57 4.02
3236 3990 4.640789 ACTGATGTCGAAGATACAGTCC 57.359 45.455 0.00 0.00 40.57 3.85
3237 3991 6.183360 ACAGTACTGATGTCGAAGATACAGTC 60.183 42.308 29.30 7.49 42.25 3.51
3238 3992 5.648526 ACAGTACTGATGTCGAAGATACAGT 59.351 40.000 29.30 13.42 44.04 3.55
3239 3993 5.968261 CACAGTACTGATGTCGAAGATACAG 59.032 44.000 29.30 0.00 40.67 2.74
3240 3994 5.676331 GCACAGTACTGATGTCGAAGATACA 60.676 44.000 29.30 0.00 40.67 2.29
3241 3995 4.735822 GCACAGTACTGATGTCGAAGATAC 59.264 45.833 29.30 4.53 40.67 2.24
3242 3996 4.398044 TGCACAGTACTGATGTCGAAGATA 59.602 41.667 29.30 0.00 40.67 1.98
3243 3997 3.193479 TGCACAGTACTGATGTCGAAGAT 59.807 43.478 29.30 0.00 40.67 2.40
3244 3998 2.556622 TGCACAGTACTGATGTCGAAGA 59.443 45.455 29.30 0.00 0.00 2.87
3245 3999 2.946564 TGCACAGTACTGATGTCGAAG 58.053 47.619 29.30 8.89 0.00 3.79
3246 4000 3.057019 GTTGCACAGTACTGATGTCGAA 58.943 45.455 29.30 13.51 0.00 3.71
3247 4001 2.035321 TGTTGCACAGTACTGATGTCGA 59.965 45.455 29.30 14.64 0.00 4.20
3248 4002 2.403259 TGTTGCACAGTACTGATGTCG 58.597 47.619 29.30 12.17 0.00 4.35
3249 4003 4.214119 ACATTGTTGCACAGTACTGATGTC 59.786 41.667 29.30 17.13 0.00 3.06
3250 4004 4.136796 ACATTGTTGCACAGTACTGATGT 58.863 39.130 29.30 20.96 0.00 3.06
3301 4055 4.388773 TGCTTTGCACTAATACTTCGACAG 59.611 41.667 0.00 0.00 31.71 3.51
3374 4136 4.963318 ATCTTGGCAGATTCCTCGATTA 57.037 40.909 0.00 0.00 36.18 1.75
3615 4377 4.009675 CGTCCATCTGATTTTCCAAGGAA 58.990 43.478 0.00 0.00 0.00 3.36
3616 4378 3.263170 TCGTCCATCTGATTTTCCAAGGA 59.737 43.478 0.00 0.00 0.00 3.36
3636 4398 8.015087 TGTTCTTCTACATTATTTTGTTGCTCG 58.985 33.333 0.00 0.00 0.00 5.03
3660 4422 3.842925 ATGTGCCTCGCCGGTTTGT 62.843 57.895 1.90 0.00 34.25 2.83
3666 4428 3.853330 CGAACATGTGCCTCGCCG 61.853 66.667 0.00 0.00 0.00 6.46
3668 4430 1.014044 TTCTCGAACATGTGCCTCGC 61.014 55.000 12.50 0.00 32.66 5.03
3826 4670 6.438741 TGCACCACCATTTATTTCCTGATAAA 59.561 34.615 0.00 0.00 36.30 1.40
3846 4690 1.669795 GCCAAATAACTGCACTGCACC 60.670 52.381 0.00 0.00 33.79 5.01
4183 5043 2.168106 AGCCAATCACACAAAAACAGCA 59.832 40.909 0.00 0.00 0.00 4.41
4235 5095 1.213296 ACACCTGGAAGTTGGAGTGT 58.787 50.000 0.00 0.00 33.81 3.55
4250 5110 7.761409 TCTATGTTATTCATGAAAGCAACACC 58.239 34.615 24.29 7.42 37.91 4.16
4376 5240 8.506168 TCTTTTCAAGTAGTGGCCTAATATTG 57.494 34.615 3.32 4.24 0.00 1.90
4382 5246 6.264518 CCTTTTTCTTTTCAAGTAGTGGCCTA 59.735 38.462 3.32 0.00 0.00 3.93
4414 5278 4.202461 TGGAACACTAAAGGAAGCACTGAT 60.202 41.667 0.00 0.00 0.00 2.90
4614 5512 4.569023 TGCTGCGCTCCGGTATCG 62.569 66.667 9.73 4.79 0.00 2.92
4812 5710 3.829601 ACGAGACTTCATCAGAACCTTCT 59.170 43.478 0.00 0.00 38.25 2.85
4856 5754 2.750141 AGGATTACTACTGCTCCGGA 57.250 50.000 2.93 2.93 32.87 5.14
4890 5788 1.228033 GGCCCGTGGTTGTAACTGT 60.228 57.895 0.00 0.00 0.00 3.55
4902 5800 1.228154 GAACCTCTTGTTGGCCCGT 60.228 57.895 0.00 0.00 37.29 5.28
4963 5865 5.124457 GCAGGAAATCTTTGCATCACTAGAA 59.876 40.000 0.00 0.00 37.75 2.10
5070 5973 2.425668 TGCTGAGTAGTTATAGCGCACA 59.574 45.455 11.47 0.00 38.96 4.57
5072 5975 2.688446 ACTGCTGAGTAGTTATAGCGCA 59.312 45.455 11.47 0.00 38.96 6.09
5100 6003 8.267894 ACAAACAGCTTGTAGTATGGAGATTAT 58.732 33.333 0.00 0.00 46.75 1.28
5252 6158 1.034838 TTCACTTGCCGTTTGCCAGT 61.035 50.000 0.00 0.00 46.22 4.00
5286 6192 3.168528 TAGCCTTGGGGGATCGGC 61.169 66.667 0.00 0.00 42.79 5.54
5360 6266 2.874701 GCAGCTCAACTCTCTTGAACAA 59.125 45.455 0.00 0.00 0.00 2.83
5363 6269 2.549563 CCTGCAGCTCAACTCTCTTGAA 60.550 50.000 8.66 0.00 0.00 2.69
5407 6314 3.758023 TCAAACCTTGACGACGGTAGATA 59.242 43.478 0.00 0.00 34.08 1.98
5427 6334 2.809174 CCGTCGTCGCATGCTTCA 60.809 61.111 17.13 0.00 35.54 3.02
5432 6339 2.202690 TAAGGCCGTCGTCGCATG 60.203 61.111 0.00 0.00 35.54 4.06
5433 6340 1.735376 ATCTAAGGCCGTCGTCGCAT 61.735 55.000 0.00 0.00 35.54 4.73
5434 6341 1.940883 AATCTAAGGCCGTCGTCGCA 61.941 55.000 0.00 0.00 35.54 5.10
5437 6344 1.536284 CCAGAATCTAAGGCCGTCGTC 60.536 57.143 0.00 0.00 0.00 4.20
5438 6345 0.460311 CCAGAATCTAAGGCCGTCGT 59.540 55.000 0.00 0.00 0.00 4.34
5439 6346 0.744874 TCCAGAATCTAAGGCCGTCG 59.255 55.000 0.00 0.00 0.00 5.12
5440 6347 2.483889 CCTTCCAGAATCTAAGGCCGTC 60.484 54.545 0.00 0.00 33.84 4.79
5441 6348 1.486726 CCTTCCAGAATCTAAGGCCGT 59.513 52.381 0.00 0.00 33.84 5.68
5476 6400 9.586732 ACCTATATGGCTAAGAAATAAATGCAA 57.413 29.630 0.00 0.00 40.22 4.08
5754 6689 6.770785 AGGTACAGACTACAATTGCTCAAAAA 59.229 34.615 5.05 0.00 0.00 1.94
5755 6690 6.296026 AGGTACAGACTACAATTGCTCAAAA 58.704 36.000 5.05 0.00 0.00 2.44
5756 6691 5.865085 AGGTACAGACTACAATTGCTCAAA 58.135 37.500 5.05 0.00 0.00 2.69
5757 6692 5.483685 AGGTACAGACTACAATTGCTCAA 57.516 39.130 5.05 0.00 0.00 3.02
5758 6693 5.237815 CAAGGTACAGACTACAATTGCTCA 58.762 41.667 5.05 0.00 0.00 4.26
5759 6694 4.093556 GCAAGGTACAGACTACAATTGCTC 59.906 45.833 5.05 0.00 38.01 4.26
5760 6695 4.003648 GCAAGGTACAGACTACAATTGCT 58.996 43.478 5.05 0.00 38.01 3.91
5761 6696 4.003648 AGCAAGGTACAGACTACAATTGC 58.996 43.478 5.05 8.45 39.66 3.56
5762 6697 6.560253 AAAGCAAGGTACAGACTACAATTG 57.440 37.500 3.24 3.24 0.00 2.32
5763 6698 7.582667 AAAAAGCAAGGTACAGACTACAATT 57.417 32.000 0.00 0.00 0.00 2.32
5785 6720 4.661709 AGGTACAGACTAACCCCTCAAAAA 59.338 41.667 0.00 0.00 36.34 1.94
5786 6721 4.237018 AGGTACAGACTAACCCCTCAAAA 58.763 43.478 0.00 0.00 36.34 2.44
5787 6722 3.865571 AGGTACAGACTAACCCCTCAAA 58.134 45.455 0.00 0.00 36.34 2.69
5788 6723 3.555117 AGGTACAGACTAACCCCTCAA 57.445 47.619 0.00 0.00 36.34 3.02
5789 6724 3.170717 CAAGGTACAGACTAACCCCTCA 58.829 50.000 0.00 0.00 36.34 3.86
5790 6725 2.093606 GCAAGGTACAGACTAACCCCTC 60.094 54.545 0.00 0.00 36.34 4.30
5791 6726 1.907255 GCAAGGTACAGACTAACCCCT 59.093 52.381 0.00 0.00 36.34 4.79
5792 6727 1.907255 AGCAAGGTACAGACTAACCCC 59.093 52.381 0.00 0.00 36.34 4.95
5793 6728 2.565834 TCAGCAAGGTACAGACTAACCC 59.434 50.000 0.00 0.00 36.34 4.11
5794 6729 3.258622 ACTCAGCAAGGTACAGACTAACC 59.741 47.826 0.00 0.00 35.91 2.85
5795 6730 4.522722 ACTCAGCAAGGTACAGACTAAC 57.477 45.455 0.00 0.00 0.00 2.34
5796 6731 4.799586 GCAACTCAGCAAGGTACAGACTAA 60.800 45.833 0.00 0.00 0.00 2.24
5797 6732 3.306088 GCAACTCAGCAAGGTACAGACTA 60.306 47.826 0.00 0.00 0.00 2.59
5798 6733 2.548920 GCAACTCAGCAAGGTACAGACT 60.549 50.000 0.00 0.00 0.00 3.24
5803 6738 1.160137 CCAGCAACTCAGCAAGGTAC 58.840 55.000 0.00 0.00 36.85 3.34
5816 6751 2.283101 GACACCATGGCCCAGCAA 60.283 61.111 13.04 0.00 0.00 3.91
5845 6780 7.275999 GCCTTAACAAGCAAGTCTACTACTAAG 59.724 40.741 0.00 0.00 37.50 2.18
5854 6811 1.882623 GCAGCCTTAACAAGCAAGTCT 59.117 47.619 0.00 0.00 0.00 3.24
5857 6814 0.109597 CCGCAGCCTTAACAAGCAAG 60.110 55.000 0.00 0.00 0.00 4.01
5873 6830 1.819632 ATTTCGTCTGATGGGCCGC 60.820 57.895 0.00 0.00 0.00 6.53
5874 6831 1.439353 CCATTTCGTCTGATGGGCCG 61.439 60.000 0.00 0.00 39.30 6.13
5897 6854 3.752339 GCTTTCTTGCTGGGCCGG 61.752 66.667 8.39 8.39 0.00 6.13
5928 6885 2.700371 GGGCAAGGAATAAAGGGAATGG 59.300 50.000 0.00 0.00 0.00 3.16
5929 6886 2.700371 GGGGCAAGGAATAAAGGGAATG 59.300 50.000 0.00 0.00 0.00 2.67
5930 6887 2.689723 CGGGGCAAGGAATAAAGGGAAT 60.690 50.000 0.00 0.00 0.00 3.01
5931 6888 1.341581 CGGGGCAAGGAATAAAGGGAA 60.342 52.381 0.00 0.00 0.00 3.97
5932 6889 0.257616 CGGGGCAAGGAATAAAGGGA 59.742 55.000 0.00 0.00 0.00 4.20
5965 6922 2.417515 GCCAAGGAAACGGAACAAAACA 60.418 45.455 0.00 0.00 0.00 2.83
5970 6927 1.153127 ACGCCAAGGAAACGGAACA 60.153 52.632 0.00 0.00 0.00 3.18
6399 7360 4.078516 ACTAACCAGGTCGCCGGC 62.079 66.667 19.07 19.07 0.00 6.13
6406 7367 1.988406 GGAGGGCGACTAACCAGGT 60.988 63.158 0.00 0.00 0.00 4.00
6450 7418 1.470098 CGAACAGCAAAATCAGGAGGG 59.530 52.381 0.00 0.00 0.00 4.30
6456 7424 3.424829 GCTTCGATCGAACAGCAAAATCA 60.425 43.478 28.36 7.14 0.00 2.57
6464 7432 3.902465 CACAAAAAGCTTCGATCGAACAG 59.098 43.478 25.96 18.36 0.00 3.16
6485 7453 4.157289 GTCCTACGGATTATATTCCTCGCA 59.843 45.833 11.04 0.00 32.73 5.10
6497 7465 2.442236 TAGGGTTCGTCCTACGGATT 57.558 50.000 0.00 0.00 42.81 3.01
6498 7466 2.442236 TTAGGGTTCGTCCTACGGAT 57.558 50.000 0.00 0.00 42.81 4.18
6505 7473 4.577693 GGGTAAATCAATTAGGGTTCGTCC 59.422 45.833 0.00 0.00 0.00 4.79
6525 7493 2.120274 CCTGGGGTGCAAATGGGT 59.880 61.111 0.00 0.00 0.00 4.51
6574 7547 8.725405 AATAGAAGAAGTAAAAAGGAGCTAGC 57.275 34.615 6.62 6.62 0.00 3.42



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.