Multiple sequence alignment - TraesCS5A01G422600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G422600 chr5A 100.000 4497 0 0 1 4497 608652847 608657343 0.000000e+00 8305.0
1 TraesCS5A01G422600 chr5A 77.394 376 51 20 4142 4497 47648373 47648012 4.590000e-45 193.0
2 TraesCS5A01G422600 chr5A 93.333 45 2 1 74 117 557074780 557074824 1.040000e-06 65.8
3 TraesCS5A01G422600 chr5D 95.184 2824 102 11 875 3694 487950607 487953400 0.000000e+00 4431.0
4 TraesCS5A01G422600 chr5D 93.319 2874 103 22 877 3694 534575190 534572350 0.000000e+00 4161.0
5 TraesCS5A01G422600 chr5D 95.938 320 8 2 561 877 487950206 487950523 8.630000e-142 514.0
6 TraesCS5A01G422600 chr5D 95.092 326 5 3 561 877 534575599 534575276 1.870000e-138 503.0
7 TraesCS5A01G422600 chr5D 91.967 361 14 6 73 420 487948848 487949206 4.040000e-135 492.0
8 TraesCS5A01G422600 chr5D 91.667 300 15 7 231 525 534570808 534570514 1.510000e-109 407.0
9 TraesCS5A01G422600 chr5D 90.842 273 15 5 156 420 534576633 534576363 1.540000e-94 357.0
10 TraesCS5A01G422600 chr5D 88.215 297 20 8 231 522 487955188 487955474 1.550000e-89 340.0
11 TraesCS5A01G422600 chr5D 96.689 151 5 0 3987 4137 487953397 487953547 7.470000e-63 252.0
12 TraesCS5A01G422600 chr5D 96.026 151 6 0 3987 4137 534572353 534572203 3.470000e-61 246.0
13 TraesCS5A01G422600 chr5D 100.000 68 0 0 5 72 487948391 487948458 4.720000e-25 126.0
14 TraesCS5A01G422600 chr5D 72.319 401 94 14 1135 1528 445492366 445491976 4.760000e-20 110.0
15 TraesCS5A01G422600 chr5B 93.904 1378 50 14 875 2237 600549000 600550358 0.000000e+00 2049.0
16 TraesCS5A01G422600 chr5B 97.139 769 21 1 2476 3244 600550355 600551122 0.000000e+00 1297.0
17 TraesCS5A01G422600 chr5B 92.615 501 23 7 73 563 600544771 600545267 0.000000e+00 708.0
18 TraesCS5A01G422600 chr5B 93.846 325 13 4 3371 3694 600551120 600551438 2.430000e-132 483.0
19 TraesCS5A01G422600 chr5B 89.062 320 17 4 3987 4298 600551435 600551744 9.130000e-102 381.0
20 TraesCS5A01G422600 chr5B 96.364 220 6 1 561 780 600548738 600548955 1.190000e-95 361.0
21 TraesCS5A01G422600 chr5B 91.111 45 3 1 72 115 652522683 652522639 4.860000e-05 60.2
22 TraesCS5A01G422600 chr5B 100.000 28 0 0 72 99 324299863 324299836 8.000000e-03 52.8
23 TraesCS5A01G422600 chrUn 84.744 1193 165 8 2030 3219 26487444 26486266 0.000000e+00 1179.0
24 TraesCS5A01G422600 chrUn 84.487 896 101 19 875 1755 26488600 26487728 0.000000e+00 850.0
25 TraesCS5A01G422600 chrUn 77.572 486 92 15 1151 1632 63573185 63572713 1.230000e-70 278.0
26 TraesCS5A01G422600 chrUn 77.572 486 92 15 1151 1632 411620758 411620286 1.230000e-70 278.0
27 TraesCS5A01G422600 chrUn 84.559 136 16 4 3242 3373 248180292 248180426 3.650000e-26 130.0
28 TraesCS5A01G422600 chrUn 84.559 136 16 4 3242 3373 374426913 374427047 3.650000e-26 130.0
29 TraesCS5A01G422600 chr6B 83.660 1175 163 10 2030 3202 82726898 82725751 0.000000e+00 1079.0
30 TraesCS5A01G422600 chr6B 80.190 1156 189 21 1990 3134 2637501 2638627 0.000000e+00 830.0
31 TraesCS5A01G422600 chr6B 83.462 907 108 22 875 1755 82728078 82727188 0.000000e+00 806.0
32 TraesCS5A01G422600 chr6B 83.531 674 78 21 1043 1691 2636474 2637139 2.320000e-167 599.0
33 TraesCS5A01G422600 chr6B 80.654 367 47 9 4150 4496 529261058 529261420 3.450000e-66 263.0
34 TraesCS5A01G422600 chr6B 82.329 249 34 5 4137 4377 2631606 2631360 1.640000e-49 207.0
35 TraesCS5A01G422600 chr6B 78.716 296 34 19 1079 1365 718911614 718911889 2.150000e-38 171.0
36 TraesCS5A01G422600 chr6B 85.417 144 21 0 1722 1865 718919493 718919636 2.800000e-32 150.0
37 TraesCS5A01G422600 chr6B 85.821 134 15 3 3242 3372 58075398 58075266 6.070000e-29 139.0
38 TraesCS5A01G422600 chr1D 82.715 1186 179 17 2025 3194 405056292 405057467 0.000000e+00 1031.0
39 TraesCS5A01G422600 chr1D 88.489 695 64 7 1117 1798 405055348 405056039 0.000000e+00 826.0
40 TraesCS5A01G422600 chr1D 77.984 377 66 12 4134 4497 342853585 342853213 2.110000e-53 220.0
41 TraesCS5A01G422600 chr1D 78.215 381 46 15 4138 4497 426745724 426746088 4.560000e-50 209.0
42 TraesCS5A01G422600 chr1D 90.698 43 3 1 74 115 250421750 250421708 6.280000e-04 56.5
43 TraesCS5A01G422600 chr3B 98.675 302 2 1 3692 3993 758762842 758762543 6.620000e-148 534.0
44 TraesCS5A01G422600 chr3B 86.923 130 14 2 3246 3372 252557689 252557560 4.690000e-30 143.0
45 TraesCS5A01G422600 chr2D 98.658 298 2 1 3693 3990 565529622 565529327 1.110000e-145 527.0
46 TraesCS5A01G422600 chr7B 98.020 303 4 1 3688 3990 653432265 653432565 3.990000e-145 525.0
47 TraesCS5A01G422600 chr3A 98.333 300 3 1 3693 3992 656718051 656718348 3.990000e-145 525.0
48 TraesCS5A01G422600 chr3A 93.333 45 2 1 74 117 730342803 730342847 1.040000e-06 65.8
49 TraesCS5A01G422600 chr1A 98.020 303 4 1 3690 3992 15036627 15036927 3.990000e-145 525.0
50 TraesCS5A01G422600 chr1A 97.690 303 5 1 3690 3992 15080019 15080319 1.850000e-143 520.0
51 TraesCS5A01G422600 chr7A 98.013 302 4 1 3689 3990 496750089 496750388 1.430000e-144 523.0
52 TraesCS5A01G422600 chr7A 77.540 374 59 10 4138 4490 650360632 650361001 7.630000e-48 202.0
53 TraesCS5A01G422600 chr7A 81.609 174 30 2 2904 3076 719637762 719637590 4.690000e-30 143.0
54 TraesCS5A01G422600 chr4A 98.013 302 4 1 3689 3990 30695901 30696200 1.430000e-144 523.0
55 TraesCS5A01G422600 chr4A 97.697 304 5 1 3691 3994 531107390 531107089 5.160000e-144 521.0
56 TraesCS5A01G422600 chr1B 83.113 379 34 13 4139 4497 304386585 304386953 7.260000e-83 318.0
57 TraesCS5A01G422600 chr1B 80.155 388 45 13 4129 4497 642764722 642765096 1.240000e-65 261.0
58 TraesCS5A01G422600 chr3D 82.086 374 38 18 4146 4497 153072599 153072233 4.400000e-75 292.0
59 TraesCS5A01G422600 chr4D 76.762 525 94 22 1135 1651 2110158 2110662 7.410000e-68 268.0
60 TraesCS5A01G422600 chr4D 72.308 260 63 9 1272 1528 2973696 2973949 6.240000e-09 73.1
61 TraesCS5A01G422600 chr6D 77.749 382 62 8 4134 4495 38708685 38709063 3.520000e-51 213.0
62 TraesCS5A01G422600 chr6D 78.431 357 54 12 4134 4480 318083428 318083771 1.270000e-50 211.0
63 TraesCS5A01G422600 chr6D 87.097 155 12 3 4139 4286 380997831 380997678 7.740000e-38 169.0
64 TraesCS5A01G422600 chr7D 89.313 131 12 1 3242 3370 550104343 550104473 3.600000e-36 163.0
65 TraesCS5A01G422600 chr7D 79.096 177 37 0 2910 3086 174333115 174333291 6.110000e-24 122.0
66 TraesCS5A01G422600 chr4B 85.185 135 15 4 3243 3373 3361526 3361659 2.820000e-27 134.0
67 TraesCS5A01G422600 chr4B 84.559 136 16 4 3242 3373 3490002 3490136 3.650000e-26 130.0
68 TraesCS5A01G422600 chr4B 84.559 136 16 4 3242 3373 3519980 3520114 3.650000e-26 130.0
69 TraesCS5A01G422600 chr4B 93.333 45 2 1 74 117 618335110 618335066 1.040000e-06 65.8
70 TraesCS5A01G422600 chr2A 91.111 45 3 1 72 115 43155312 43155268 4.860000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G422600 chr5A 608652847 608657343 4496 False 8305.000000 8305 100.000000 1 4497 1 chr5A.!!$F2 4496
1 TraesCS5A01G422600 chr5D 534570514 534576633 6119 True 1134.800000 4161 93.389200 156 4137 5 chr5D.!!$R2 3981
2 TraesCS5A01G422600 chr5D 487948391 487955474 7083 False 1025.833333 4431 94.665500 5 4137 6 chr5D.!!$F1 4132
3 TraesCS5A01G422600 chr5B 600544771 600551744 6973 False 879.833333 2049 93.821667 73 4298 6 chr5B.!!$F1 4225
4 TraesCS5A01G422600 chrUn 26486266 26488600 2334 True 1014.500000 1179 84.615500 875 3219 2 chrUn.!!$R3 2344
5 TraesCS5A01G422600 chr6B 82725751 82728078 2327 True 942.500000 1079 83.561000 875 3202 2 chr6B.!!$R3 2327
6 TraesCS5A01G422600 chr6B 2636474 2638627 2153 False 714.500000 830 81.860500 1043 3134 2 chr6B.!!$F4 2091
7 TraesCS5A01G422600 chr1D 405055348 405057467 2119 False 928.500000 1031 85.602000 1117 3194 2 chr1D.!!$F2 2077
8 TraesCS5A01G422600 chr4D 2110158 2110662 504 False 268.000000 268 76.762000 1135 1651 1 chr4D.!!$F1 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
380 787 0.109532 TTTGGTGCATCAAGACGGGA 59.890 50.0 13.02 0.0 0.00 5.14 F
580 4929 0.604073 TCAGATTCGTAACCGTGCCA 59.396 50.0 0.00 0.0 35.01 4.92 F
2078 6747 1.088340 CCTGATGCTCTTCGCCACAG 61.088 60.0 0.00 0.0 39.10 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2359 7040 2.111999 TTTCGTAGGCTGCAGGCACT 62.112 55.0 37.94 23.17 44.01 4.4 R
2490 7174 1.174712 CCCTGTTGGTGCTTCACTGG 61.175 60.0 0.00 0.00 34.40 4.0 R
3853 8588 0.035176 ATTGTTGTTGGTGCCATGGC 59.965 50.0 30.54 30.54 42.35 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
192 591 8.181573 TGTCAAGAGTGTTCTGAATTTACAAAC 58.818 33.333 0.00 0.00 32.79 2.93
201 600 3.376540 TGAATTTACAAACGCAACTGGC 58.623 40.909 0.00 0.00 39.90 4.85
210 609 2.256461 GCAACTGGCAGGCGAAAG 59.744 61.111 20.34 2.80 43.97 2.62
222 621 3.248602 GCAGGCGAAAGGATTACACATAG 59.751 47.826 0.00 0.00 0.00 2.23
227 626 4.745620 GCGAAAGGATTACACATAGGAGAC 59.254 45.833 0.00 0.00 0.00 3.36
288 687 1.152963 AACCGTGCTTCCTGCTGTT 60.153 52.632 0.00 0.00 43.37 3.16
291 690 0.798776 CCGTGCTTCCTGCTGTTTAG 59.201 55.000 0.00 0.00 43.37 1.85
380 787 0.109532 TTTGGTGCATCAAGACGGGA 59.890 50.000 13.02 0.00 0.00 5.14
394 801 5.655090 TCAAGACGGGATCTAAGTTATGTCA 59.345 40.000 0.00 0.00 36.27 3.58
395 802 5.776173 AGACGGGATCTAAGTTATGTCAG 57.224 43.478 0.00 0.00 35.15 3.51
396 803 5.446860 AGACGGGATCTAAGTTATGTCAGA 58.553 41.667 0.00 0.00 35.15 3.27
397 804 6.071984 AGACGGGATCTAAGTTATGTCAGAT 58.928 40.000 0.00 0.00 35.15 2.90
431 1024 1.747355 GATGAAGGCCATGTTGTCAGG 59.253 52.381 5.01 0.00 35.17 3.86
467 1060 9.377383 CGTTTGTTCTTACTAAATCATCGTTTT 57.623 29.630 0.00 0.00 0.00 2.43
489 1082 9.678941 GTTTTTGTTTTAAATTTTTGGTCACCA 57.321 25.926 0.00 0.00 0.00 4.17
493 1086 9.454859 TTGTTTTAAATTTTTGGTCACCAAGAT 57.545 25.926 9.81 5.55 44.84 2.40
579 4928 1.278238 CTCAGATTCGTAACCGTGCC 58.722 55.000 0.00 0.00 35.01 5.01
580 4929 0.604073 TCAGATTCGTAACCGTGCCA 59.396 50.000 0.00 0.00 35.01 4.92
618 4967 3.904136 AAGAACAATTCTCTGGTTGCG 57.096 42.857 0.00 0.00 39.61 4.85
857 5218 6.197096 GCATGAAATCAAAAGCATTAGTACCG 59.803 38.462 0.00 0.00 0.00 4.02
881 5328 7.128331 CGAATAACATCAATAGCAGGAGTTTG 58.872 38.462 0.00 0.00 0.00 2.93
934 5385 3.863041 AGACGATTCCTTTAGCTGTTCC 58.137 45.455 0.00 0.00 0.00 3.62
943 5394 3.366679 CCTTTAGCTGTTCCGACGACTTA 60.367 47.826 0.00 0.00 0.00 2.24
988 5449 6.183360 CCGTATGTAAGCTGATAGAGTATCCC 60.183 46.154 0.00 0.00 33.66 3.85
999 5460 2.980233 GTATCCCTGCCATGGCGC 60.980 66.667 30.87 9.72 45.51 6.53
1073 5552 2.735677 CGTGTGCGTGTGTGTGTGT 61.736 57.895 0.00 0.00 0.00 3.72
1074 5553 1.225991 GTGTGCGTGTGTGTGTGTG 60.226 57.895 0.00 0.00 0.00 3.82
1115 5610 2.361737 GAAAGGGAGTGCCAGCCC 60.362 66.667 2.50 0.00 45.04 5.19
1665 6181 1.676968 CTTCCACCGATGTGTCCCA 59.323 57.895 0.00 0.00 41.09 4.37
2078 6747 1.088340 CCTGATGCTCTTCGCCACAG 61.088 60.000 0.00 0.00 39.10 3.66
2103 6772 2.692557 ACAAGCATGGTTACAACAGCAA 59.307 40.909 10.31 0.00 0.00 3.91
2359 7040 3.257127 GCAAGGTTTGGTATGTAAGGCAA 59.743 43.478 0.00 0.00 0.00 4.52
2418 7102 3.672808 GGCACATAGAAGATGGATGGAG 58.327 50.000 0.00 0.00 0.00 3.86
2422 7106 4.346127 CACATAGAAGATGGATGGAGGACA 59.654 45.833 0.00 0.00 0.00 4.02
2490 7174 0.817013 CAGCTGACTCTGGAGAGGTC 59.183 60.000 8.42 4.47 46.13 3.85
2660 7347 0.249741 AAGTGACCTTACGCAACGCT 60.250 50.000 0.00 0.00 0.00 5.07
2701 7388 8.807948 ACTACATGTTATACCTGCTTTTCATT 57.192 30.769 2.30 0.00 0.00 2.57
2784 7471 8.597167 TGATCTAGAGGAAATCTTGAAGAACAA 58.403 33.333 0.00 0.00 42.02 2.83
2847 7534 2.798148 ATTCAACAGACGGCCGGGAC 62.798 60.000 31.76 19.83 0.00 4.46
2875 7562 0.386476 TTCACAAAGCTTGCAGGCTG 59.614 50.000 25.33 16.00 42.24 4.85
3216 7903 5.556915 ACTTCATTCCTTCGTGTTATTCCA 58.443 37.500 0.00 0.00 0.00 3.53
3248 7935 9.634163 CTGTGTGTTAAAAATTTATTACTCCCC 57.366 33.333 0.00 0.00 0.00 4.81
3275 7962 9.828039 CCGTTCCCTAATATAAGACTTTTTAGT 57.172 33.333 0.00 0.00 0.00 2.24
3367 8101 6.415206 TGTCTTATATTAAGGAACGGAGGG 57.585 41.667 0.00 0.00 0.00 4.30
3372 8106 8.175431 TCTTATATTAAGGAACGGAGGGAGTAT 58.825 37.037 0.00 0.00 0.00 2.12
3406 8140 1.836604 GCCCCTTCTTTGGGTGCAA 60.837 57.895 0.00 0.00 45.70 4.08
3425 8160 2.299582 CAAGGCCACCATGTTCATTTCA 59.700 45.455 5.01 0.00 0.00 2.69
3431 8166 3.514706 CCACCATGTTCATTTCATTCCCA 59.485 43.478 0.00 0.00 0.00 4.37
3547 8282 2.779506 CGAATTAGATTACCCTGGGCC 58.220 52.381 14.08 0.00 0.00 5.80
3594 8329 3.670523 CGTCAGTTGTATCATCATAGGCG 59.329 47.826 0.00 0.00 0.00 5.52
3652 8387 7.382218 GCAGTAATTATTCATGGCCAATTGTAC 59.618 37.037 10.96 1.98 0.00 2.90
3698 8433 9.478768 GATAGCTCTATTAAAACAAGTACTCCC 57.521 37.037 0.00 0.00 0.00 4.30
3699 8434 7.497773 AGCTCTATTAAAACAAGTACTCCCT 57.502 36.000 0.00 0.00 0.00 4.20
3700 8435 7.557724 AGCTCTATTAAAACAAGTACTCCCTC 58.442 38.462 0.00 0.00 0.00 4.30
3701 8436 6.762187 GCTCTATTAAAACAAGTACTCCCTCC 59.238 42.308 0.00 0.00 0.00 4.30
3702 8437 6.870769 TCTATTAAAACAAGTACTCCCTCCG 58.129 40.000 0.00 0.00 0.00 4.63
3703 8438 4.961438 TTAAAACAAGTACTCCCTCCGT 57.039 40.909 0.00 0.00 0.00 4.69
3704 8439 3.397849 AAAACAAGTACTCCCTCCGTC 57.602 47.619 0.00 0.00 0.00 4.79
3705 8440 1.264295 AACAAGTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
3706 8441 0.964358 ACAAGTACTCCCTCCGTCCG 60.964 60.000 0.00 0.00 0.00 4.79
3707 8442 1.379576 AAGTACTCCCTCCGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
3708 8443 2.832201 GTACTCCCTCCGTCCGGG 60.832 72.222 0.00 0.00 43.38 5.73
3709 8444 3.341629 TACTCCCTCCGTCCGGGT 61.342 66.667 0.00 0.00 42.56 5.28
3710 8445 2.922704 TACTCCCTCCGTCCGGGTT 61.923 63.158 0.00 0.00 42.56 4.11
3711 8446 2.445492 TACTCCCTCCGTCCGGGTTT 62.445 60.000 0.00 0.00 42.56 3.27
3712 8447 1.683365 CTCCCTCCGTCCGGGTTTA 60.683 63.158 0.00 0.00 42.56 2.01
3713 8448 1.002017 TCCCTCCGTCCGGGTTTAT 59.998 57.895 0.00 0.00 42.56 1.40
3714 8449 0.618393 TCCCTCCGTCCGGGTTTATT 60.618 55.000 0.00 0.00 42.56 1.40
3715 8450 1.122227 CCCTCCGTCCGGGTTTATTA 58.878 55.000 0.00 0.00 36.91 0.98
3716 8451 1.069668 CCCTCCGTCCGGGTTTATTAG 59.930 57.143 0.00 0.00 36.91 1.73
3717 8452 1.069668 CCTCCGTCCGGGTTTATTAGG 59.930 57.143 0.00 0.00 37.00 2.69
3718 8453 0.465287 TCCGTCCGGGTTTATTAGGC 59.535 55.000 0.00 0.00 37.00 3.93
3719 8454 0.533531 CCGTCCGGGTTTATTAGGCC 60.534 60.000 0.00 0.00 0.00 5.19
3720 8455 0.466963 CGTCCGGGTTTATTAGGCCT 59.533 55.000 11.78 11.78 0.00 5.19
3721 8456 1.688197 CGTCCGGGTTTATTAGGCCTA 59.312 52.381 8.91 8.91 0.00 3.93
3722 8457 2.102925 CGTCCGGGTTTATTAGGCCTAA 59.897 50.000 27.11 27.11 0.00 2.69
3723 8458 3.432046 CGTCCGGGTTTATTAGGCCTAAA 60.432 47.826 28.50 12.25 0.00 1.85
3724 8459 4.132336 GTCCGGGTTTATTAGGCCTAAAG 58.868 47.826 28.50 13.19 0.00 1.85
3725 8460 4.039339 TCCGGGTTTATTAGGCCTAAAGA 58.961 43.478 28.50 16.79 0.00 2.52
3726 8461 4.132336 CCGGGTTTATTAGGCCTAAAGAC 58.868 47.826 28.50 23.35 0.00 3.01
3727 8462 4.384427 CCGGGTTTATTAGGCCTAAAGACA 60.384 45.833 28.50 10.52 0.00 3.41
3728 8463 5.187687 CGGGTTTATTAGGCCTAAAGACAA 58.812 41.667 28.50 16.49 0.00 3.18
3729 8464 5.065602 CGGGTTTATTAGGCCTAAAGACAAC 59.934 44.000 28.50 23.66 0.00 3.32
3730 8465 6.185511 GGGTTTATTAGGCCTAAAGACAACT 58.814 40.000 28.50 13.03 0.00 3.16
3731 8466 6.662234 GGGTTTATTAGGCCTAAAGACAACTT 59.338 38.462 28.50 12.30 38.05 2.66
3732 8467 7.148120 GGGTTTATTAGGCCTAAAGACAACTTC 60.148 40.741 28.50 17.62 35.05 3.01
3733 8468 7.610692 GGTTTATTAGGCCTAAAGACAACTTCT 59.389 37.037 28.50 10.86 35.05 2.85
3734 8469 8.666573 GTTTATTAGGCCTAAAGACAACTTCTC 58.333 37.037 28.50 6.62 35.05 2.87
3735 8470 6.628644 ATTAGGCCTAAAGACAACTTCTCT 57.371 37.500 28.50 4.96 35.05 3.10
3736 8471 4.984146 AGGCCTAAAGACAACTTCTCTT 57.016 40.909 1.29 0.00 35.05 2.85
3737 8472 7.549147 TTAGGCCTAAAGACAACTTCTCTTA 57.451 36.000 23.21 0.00 35.05 2.10
3738 8473 6.043854 AGGCCTAAAGACAACTTCTCTTAG 57.956 41.667 1.29 0.00 35.05 2.18
3739 8474 5.780793 AGGCCTAAAGACAACTTCTCTTAGA 59.219 40.000 1.29 0.00 35.05 2.10
3740 8475 5.870433 GGCCTAAAGACAACTTCTCTTAGAC 59.130 44.000 0.00 0.00 35.05 2.59
3741 8476 5.870433 GCCTAAAGACAACTTCTCTTAGACC 59.130 44.000 0.00 0.00 35.05 3.85
3742 8477 6.518537 GCCTAAAGACAACTTCTCTTAGACCA 60.519 42.308 0.00 0.00 35.05 4.02
3743 8478 7.442656 CCTAAAGACAACTTCTCTTAGACCAA 58.557 38.462 0.00 0.00 35.05 3.67
3744 8479 7.600752 CCTAAAGACAACTTCTCTTAGACCAAG 59.399 40.741 0.00 0.00 35.05 3.61
3745 8480 6.732896 AAGACAACTTCTCTTAGACCAAGA 57.267 37.500 3.85 0.00 41.10 3.02
3746 8481 6.091718 AGACAACTTCTCTTAGACCAAGAC 57.908 41.667 3.85 0.00 38.39 3.01
3747 8482 5.598830 AGACAACTTCTCTTAGACCAAGACA 59.401 40.000 3.85 0.00 38.39 3.41
3748 8483 5.602628 ACAACTTCTCTTAGACCAAGACAC 58.397 41.667 3.85 0.00 38.39 3.67
3749 8484 5.128827 ACAACTTCTCTTAGACCAAGACACA 59.871 40.000 3.85 0.00 38.39 3.72
3750 8485 6.183361 ACAACTTCTCTTAGACCAAGACACAT 60.183 38.462 3.85 0.00 38.39 3.21
3751 8486 7.015292 ACAACTTCTCTTAGACCAAGACACATA 59.985 37.037 3.85 0.00 38.39 2.29
3752 8487 7.164230 ACTTCTCTTAGACCAAGACACATAG 57.836 40.000 3.85 0.00 38.39 2.23
3753 8488 6.722129 ACTTCTCTTAGACCAAGACACATAGT 59.278 38.462 3.85 0.00 38.39 2.12
3754 8489 7.889073 ACTTCTCTTAGACCAAGACACATAGTA 59.111 37.037 3.85 0.00 38.39 1.82
3755 8490 8.645814 TTCTCTTAGACCAAGACACATAGTAA 57.354 34.615 0.00 0.00 38.39 2.24
3756 8491 8.824756 TCTCTTAGACCAAGACACATAGTAAT 57.175 34.615 0.00 0.00 38.39 1.89
3757 8492 9.256228 TCTCTTAGACCAAGACACATAGTAATT 57.744 33.333 0.00 0.00 38.39 1.40
3758 8493 9.877178 CTCTTAGACCAAGACACATAGTAATTT 57.123 33.333 0.00 0.00 38.39 1.82
3759 8494 9.653287 TCTTAGACCAAGACACATAGTAATTTG 57.347 33.333 0.00 0.00 38.39 2.32
3760 8495 6.743575 AGACCAAGACACATAGTAATTTGC 57.256 37.500 0.00 0.00 0.00 3.68
3761 8496 6.476378 AGACCAAGACACATAGTAATTTGCT 58.524 36.000 0.00 0.00 0.00 3.91
3762 8497 6.595716 AGACCAAGACACATAGTAATTTGCTC 59.404 38.462 0.00 0.00 0.00 4.26
3763 8498 6.237901 ACCAAGACACATAGTAATTTGCTCA 58.762 36.000 0.00 0.00 0.00 4.26
3764 8499 6.149474 ACCAAGACACATAGTAATTTGCTCAC 59.851 38.462 0.00 0.00 0.00 3.51
3765 8500 6.149308 CCAAGACACATAGTAATTTGCTCACA 59.851 38.462 0.00 0.00 0.00 3.58
3766 8501 7.148188 CCAAGACACATAGTAATTTGCTCACAT 60.148 37.037 0.00 0.00 0.00 3.21
3767 8502 7.928307 AGACACATAGTAATTTGCTCACATT 57.072 32.000 0.00 0.00 0.00 2.71
3768 8503 9.448438 AAGACACATAGTAATTTGCTCACATTA 57.552 29.630 0.00 0.00 0.00 1.90
3769 8504 9.448438 AGACACATAGTAATTTGCTCACATTAA 57.552 29.630 0.00 0.00 0.00 1.40
3777 8512 9.023962 AGTAATTTGCTCACATTAATTCTTCCA 57.976 29.630 0.00 0.00 0.00 3.53
3778 8513 9.807649 GTAATTTGCTCACATTAATTCTTCCAT 57.192 29.630 0.00 0.00 0.00 3.41
3780 8515 8.937634 ATTTGCTCACATTAATTCTTCCATTC 57.062 30.769 0.00 0.00 0.00 2.67
3781 8516 6.455360 TGCTCACATTAATTCTTCCATTCC 57.545 37.500 0.00 0.00 0.00 3.01
3782 8517 5.951148 TGCTCACATTAATTCTTCCATTCCA 59.049 36.000 0.00 0.00 0.00 3.53
3783 8518 6.127647 TGCTCACATTAATTCTTCCATTCCAC 60.128 38.462 0.00 0.00 0.00 4.02
3784 8519 6.096001 GCTCACATTAATTCTTCCATTCCACT 59.904 38.462 0.00 0.00 0.00 4.00
3785 8520 7.630242 TCACATTAATTCTTCCATTCCACTC 57.370 36.000 0.00 0.00 0.00 3.51
3786 8521 6.603201 TCACATTAATTCTTCCATTCCACTCC 59.397 38.462 0.00 0.00 0.00 3.85
3787 8522 5.893824 ACATTAATTCTTCCATTCCACTCCC 59.106 40.000 0.00 0.00 0.00 4.30
3788 8523 5.528600 TTAATTCTTCCATTCCACTCCCA 57.471 39.130 0.00 0.00 0.00 4.37
3789 8524 4.402616 AATTCTTCCATTCCACTCCCAA 57.597 40.909 0.00 0.00 0.00 4.12
3790 8525 4.614967 ATTCTTCCATTCCACTCCCAAT 57.385 40.909 0.00 0.00 0.00 3.16
3791 8526 3.370840 TCTTCCATTCCACTCCCAATG 57.629 47.619 0.00 0.00 0.00 2.82
3792 8527 1.753073 CTTCCATTCCACTCCCAATGC 59.247 52.381 0.00 0.00 0.00 3.56
3793 8528 0.703488 TCCATTCCACTCCCAATGCA 59.297 50.000 0.00 0.00 0.00 3.96
3794 8529 0.819582 CCATTCCACTCCCAATGCAC 59.180 55.000 0.00 0.00 0.00 4.57
3795 8530 1.617804 CCATTCCACTCCCAATGCACT 60.618 52.381 0.00 0.00 0.00 4.40
3796 8531 1.747355 CATTCCACTCCCAATGCACTC 59.253 52.381 0.00 0.00 0.00 3.51
3797 8532 1.067295 TTCCACTCCCAATGCACTCT 58.933 50.000 0.00 0.00 0.00 3.24
3798 8533 0.615331 TCCACTCCCAATGCACTCTC 59.385 55.000 0.00 0.00 0.00 3.20
3799 8534 0.617413 CCACTCCCAATGCACTCTCT 59.383 55.000 0.00 0.00 0.00 3.10
3800 8535 1.406614 CCACTCCCAATGCACTCTCTC 60.407 57.143 0.00 0.00 0.00 3.20
3801 8536 1.277273 CACTCCCAATGCACTCTCTCA 59.723 52.381 0.00 0.00 0.00 3.27
3802 8537 1.277557 ACTCCCAATGCACTCTCTCAC 59.722 52.381 0.00 0.00 0.00 3.51
3803 8538 1.277273 CTCCCAATGCACTCTCTCACA 59.723 52.381 0.00 0.00 0.00 3.58
3804 8539 1.911357 TCCCAATGCACTCTCTCACAT 59.089 47.619 0.00 0.00 0.00 3.21
3805 8540 2.014857 CCCAATGCACTCTCTCACATG 58.985 52.381 0.00 0.00 0.00 3.21
3806 8541 1.400846 CCAATGCACTCTCTCACATGC 59.599 52.381 0.00 0.00 38.59 4.06
3809 8544 1.734163 TGCACTCTCTCACATGCATG 58.266 50.000 25.09 25.09 42.92 4.06
3810 8545 0.377554 GCACTCTCTCACATGCATGC 59.622 55.000 26.53 11.82 38.00 4.06
3811 8546 1.734163 CACTCTCTCACATGCATGCA 58.266 50.000 26.53 25.04 0.00 3.96
3812 8547 1.666189 CACTCTCTCACATGCATGCAG 59.334 52.381 26.69 21.02 0.00 4.41
3813 8548 0.658368 CTCTCTCACATGCATGCAGC 59.342 55.000 26.69 0.00 45.96 5.25
3814 8549 0.746923 TCTCTCACATGCATGCAGCC 60.747 55.000 26.69 0.00 44.83 4.85
3815 8550 1.001887 TCTCACATGCATGCAGCCA 60.002 52.632 26.69 8.75 44.83 4.75
3816 8551 0.609681 TCTCACATGCATGCAGCCAA 60.610 50.000 26.69 10.65 44.83 4.52
3817 8552 0.459899 CTCACATGCATGCAGCCAAT 59.540 50.000 26.69 5.62 44.83 3.16
3818 8553 0.174617 TCACATGCATGCAGCCAATG 59.825 50.000 26.69 20.32 44.83 2.82
3819 8554 0.174617 CACATGCATGCAGCCAATGA 59.825 50.000 26.69 0.00 44.83 2.57
3820 8555 0.899019 ACATGCATGCAGCCAATGAA 59.101 45.000 26.69 0.00 44.83 2.57
3821 8556 1.276705 ACATGCATGCAGCCAATGAAA 59.723 42.857 26.69 0.00 44.83 2.69
3822 8557 2.289756 ACATGCATGCAGCCAATGAAAA 60.290 40.909 26.69 0.00 44.83 2.29
3823 8558 2.545537 TGCATGCAGCCAATGAAAAA 57.454 40.000 18.46 0.00 44.83 1.94
3824 8559 2.418692 TGCATGCAGCCAATGAAAAAG 58.581 42.857 18.46 0.00 44.83 2.27
3825 8560 1.129811 GCATGCAGCCAATGAAAAAGC 59.870 47.619 14.21 0.00 37.23 3.51
3826 8561 2.418692 CATGCAGCCAATGAAAAAGCA 58.581 42.857 0.00 0.00 34.78 3.91
3827 8562 1.868469 TGCAGCCAATGAAAAAGCAC 58.132 45.000 0.00 0.00 0.00 4.40
3828 8563 1.138464 TGCAGCCAATGAAAAAGCACA 59.862 42.857 0.00 0.00 0.00 4.57
3829 8564 1.528161 GCAGCCAATGAAAAAGCACAC 59.472 47.619 0.00 0.00 0.00 3.82
3830 8565 2.823984 CAGCCAATGAAAAAGCACACA 58.176 42.857 0.00 0.00 0.00 3.72
3831 8566 3.395639 CAGCCAATGAAAAAGCACACAT 58.604 40.909 0.00 0.00 0.00 3.21
3832 8567 3.185594 CAGCCAATGAAAAAGCACACATG 59.814 43.478 0.00 0.00 0.00 3.21
3833 8568 3.069872 AGCCAATGAAAAAGCACACATGA 59.930 39.130 0.00 0.00 0.00 3.07
3834 8569 3.808726 GCCAATGAAAAAGCACACATGAA 59.191 39.130 0.00 0.00 0.00 2.57
3835 8570 4.084223 GCCAATGAAAAAGCACACATGAAG 60.084 41.667 0.00 0.00 0.00 3.02
3836 8571 5.051816 CCAATGAAAAAGCACACATGAAGT 58.948 37.500 0.00 0.00 0.00 3.01
3854 8589 8.076178 ACATGAAGTGTGTATTAACTTTTCAGC 58.924 33.333 0.00 0.00 40.28 4.26
3855 8590 6.966021 TGAAGTGTGTATTAACTTTTCAGCC 58.034 36.000 0.00 0.00 36.77 4.85
3856 8591 6.544197 TGAAGTGTGTATTAACTTTTCAGCCA 59.456 34.615 0.00 0.00 36.77 4.75
3857 8592 7.230510 TGAAGTGTGTATTAACTTTTCAGCCAT 59.769 33.333 0.00 0.00 36.77 4.40
3858 8593 6.913170 AGTGTGTATTAACTTTTCAGCCATG 58.087 36.000 0.00 0.00 0.00 3.66
3859 8594 6.071952 AGTGTGTATTAACTTTTCAGCCATGG 60.072 38.462 7.63 7.63 0.00 3.66
3860 8595 5.102313 GTGTATTAACTTTTCAGCCATGGC 58.898 41.667 30.12 30.12 42.33 4.40
3861 8596 4.769488 TGTATTAACTTTTCAGCCATGGCA 59.231 37.500 37.18 16.60 44.88 4.92
3862 8597 3.658757 TTAACTTTTCAGCCATGGCAC 57.341 42.857 37.18 10.61 44.88 5.01
3863 8598 0.681175 AACTTTTCAGCCATGGCACC 59.319 50.000 37.18 9.79 44.88 5.01
3864 8599 0.469705 ACTTTTCAGCCATGGCACCA 60.470 50.000 37.18 18.30 44.88 4.17
3865 8600 0.680618 CTTTTCAGCCATGGCACCAA 59.319 50.000 37.18 22.87 44.88 3.67
3866 8601 0.392336 TTTTCAGCCATGGCACCAAC 59.608 50.000 37.18 8.17 44.88 3.77
3867 8602 0.758310 TTTCAGCCATGGCACCAACA 60.758 50.000 37.18 13.92 44.88 3.33
3868 8603 0.758310 TTCAGCCATGGCACCAACAA 60.758 50.000 37.18 16.98 44.88 2.83
3869 8604 1.005867 CAGCCATGGCACCAACAAC 60.006 57.895 37.18 5.77 44.88 3.32
3870 8605 1.457267 AGCCATGGCACCAACAACA 60.457 52.632 37.18 0.00 44.88 3.33
3871 8606 1.047596 AGCCATGGCACCAACAACAA 61.048 50.000 37.18 0.00 44.88 2.83
3872 8607 0.035176 GCCATGGCACCAACAACAAT 59.965 50.000 32.08 0.00 41.49 2.71
3873 8608 1.274728 GCCATGGCACCAACAACAATA 59.725 47.619 32.08 0.00 41.49 1.90
3874 8609 2.674747 GCCATGGCACCAACAACAATAG 60.675 50.000 32.08 0.00 41.49 1.73
3875 8610 2.609350 CATGGCACCAACAACAATAGC 58.391 47.619 0.00 0.00 0.00 2.97
3876 8611 1.993956 TGGCACCAACAACAATAGCT 58.006 45.000 0.00 0.00 0.00 3.32
3877 8612 2.315176 TGGCACCAACAACAATAGCTT 58.685 42.857 0.00 0.00 0.00 3.74
3878 8613 2.697751 TGGCACCAACAACAATAGCTTT 59.302 40.909 0.00 0.00 0.00 3.51
3879 8614 3.243704 TGGCACCAACAACAATAGCTTTC 60.244 43.478 0.00 0.00 0.00 2.62
3880 8615 3.243704 GGCACCAACAACAATAGCTTTCA 60.244 43.478 0.00 0.00 0.00 2.69
3881 8616 4.367450 GCACCAACAACAATAGCTTTCAA 58.633 39.130 0.00 0.00 0.00 2.69
3882 8617 4.990426 GCACCAACAACAATAGCTTTCAAT 59.010 37.500 0.00 0.00 0.00 2.57
3883 8618 6.155827 GCACCAACAACAATAGCTTTCAATA 58.844 36.000 0.00 0.00 0.00 1.90
3884 8619 6.089417 GCACCAACAACAATAGCTTTCAATAC 59.911 38.462 0.00 0.00 0.00 1.89
3885 8620 7.144661 CACCAACAACAATAGCTTTCAATACA 58.855 34.615 0.00 0.00 0.00 2.29
3886 8621 7.651304 CACCAACAACAATAGCTTTCAATACAA 59.349 33.333 0.00 0.00 0.00 2.41
3887 8622 7.651704 ACCAACAACAATAGCTTTCAATACAAC 59.348 33.333 0.00 0.00 0.00 3.32
3888 8623 7.116233 CCAACAACAATAGCTTTCAATACAACC 59.884 37.037 0.00 0.00 0.00 3.77
3889 8624 7.283625 ACAACAATAGCTTTCAATACAACCA 57.716 32.000 0.00 0.00 0.00 3.67
3890 8625 7.721402 ACAACAATAGCTTTCAATACAACCAA 58.279 30.769 0.00 0.00 0.00 3.67
3891 8626 8.367156 ACAACAATAGCTTTCAATACAACCAAT 58.633 29.630 0.00 0.00 0.00 3.16
3892 8627 8.649841 CAACAATAGCTTTCAATACAACCAATG 58.350 33.333 0.00 0.00 0.00 2.82
3893 8628 8.121305 ACAATAGCTTTCAATACAACCAATGA 57.879 30.769 0.00 0.00 0.00 2.57
3894 8629 8.584157 ACAATAGCTTTCAATACAACCAATGAA 58.416 29.630 0.00 0.00 0.00 2.57
3895 8630 9.421806 CAATAGCTTTCAATACAACCAATGAAA 57.578 29.630 0.00 0.00 38.92 2.69
3897 8632 7.894376 AGCTTTCAATACAACCAATGAAATG 57.106 32.000 0.00 0.00 40.03 2.32
3898 8633 6.875195 AGCTTTCAATACAACCAATGAAATGG 59.125 34.615 0.00 0.00 46.38 3.16
3907 8642 2.701107 CCAATGAAATGGTTGCATGCA 58.299 42.857 18.46 18.46 35.65 3.96
3908 8643 3.275143 CCAATGAAATGGTTGCATGCAT 58.725 40.909 23.37 4.78 35.65 3.96
3909 8644 3.064682 CCAATGAAATGGTTGCATGCATG 59.935 43.478 23.37 22.70 35.65 4.06
3910 8645 6.495892 CCAATGAAATGGTTGCATGCATGC 62.496 45.833 38.71 38.71 43.53 4.06
3920 8655 3.824621 CATGCATGCAGCTTTCCAA 57.175 47.368 26.69 0.00 45.94 3.53
3921 8656 1.355971 CATGCATGCAGCTTTCCAAC 58.644 50.000 26.69 0.00 45.94 3.77
3922 8657 0.108992 ATGCATGCAGCTTTCCAACG 60.109 50.000 26.69 0.00 45.94 4.10
3923 8658 2.090524 GCATGCAGCTTTCCAACGC 61.091 57.895 14.21 0.00 41.15 4.84
3924 8659 1.444895 CATGCAGCTTTCCAACGCC 60.445 57.895 0.00 0.00 0.00 5.68
3925 8660 2.981560 ATGCAGCTTTCCAACGCCG 61.982 57.895 0.00 0.00 0.00 6.46
3926 8661 4.404654 GCAGCTTTCCAACGCCGG 62.405 66.667 0.00 0.00 0.00 6.13
3927 8662 3.737172 CAGCTTTCCAACGCCGGG 61.737 66.667 2.18 0.00 0.00 5.73
3931 8666 4.589675 TTTCCAACGCCGGGCCTT 62.590 61.111 14.55 5.30 0.00 4.35
3932 8667 3.193469 TTTCCAACGCCGGGCCTTA 62.193 57.895 14.55 0.00 0.00 2.69
3933 8668 2.487274 TTTCCAACGCCGGGCCTTAT 62.487 55.000 14.55 0.00 0.00 1.73
3934 8669 1.624479 TTCCAACGCCGGGCCTTATA 61.624 55.000 14.55 0.00 0.00 0.98
3935 8670 1.153127 CCAACGCCGGGCCTTATAA 60.153 57.895 14.55 0.00 0.00 0.98
3936 8671 0.748729 CCAACGCCGGGCCTTATAAA 60.749 55.000 14.55 0.00 0.00 1.40
3937 8672 1.096416 CAACGCCGGGCCTTATAAAA 58.904 50.000 14.55 0.00 0.00 1.52
3938 8673 1.064952 CAACGCCGGGCCTTATAAAAG 59.935 52.381 14.55 0.00 0.00 2.27
3952 8687 5.894807 CTTATAAAAGGGGACATGCTTGTG 58.105 41.667 10.37 0.00 35.79 3.33
3953 8688 2.380064 AAAAGGGGACATGCTTGTGA 57.620 45.000 10.37 0.00 35.79 3.58
3954 8689 2.610438 AAAGGGGACATGCTTGTGAT 57.390 45.000 10.37 0.00 35.79 3.06
3955 8690 1.843368 AAGGGGACATGCTTGTGATG 58.157 50.000 10.37 0.00 35.79 3.07
3956 8691 0.682209 AGGGGACATGCTTGTGATGC 60.682 55.000 10.37 0.00 35.79 3.91
3957 8692 0.682209 GGGGACATGCTTGTGATGCT 60.682 55.000 10.37 0.00 35.79 3.79
3958 8693 0.454600 GGGACATGCTTGTGATGCTG 59.545 55.000 10.37 0.00 35.79 4.41
3959 8694 1.456296 GGACATGCTTGTGATGCTGA 58.544 50.000 10.37 0.00 35.79 4.26
3960 8695 1.400846 GGACATGCTTGTGATGCTGAG 59.599 52.381 10.37 0.00 35.79 3.35
3961 8696 2.353323 GACATGCTTGTGATGCTGAGA 58.647 47.619 10.37 0.00 35.79 3.27
3962 8697 2.352034 GACATGCTTGTGATGCTGAGAG 59.648 50.000 10.37 0.00 35.79 3.20
3963 8698 1.671328 CATGCTTGTGATGCTGAGAGG 59.329 52.381 0.00 0.00 0.00 3.69
3964 8699 0.675837 TGCTTGTGATGCTGAGAGGC 60.676 55.000 0.00 0.00 0.00 4.70
3965 8700 1.375098 GCTTGTGATGCTGAGAGGCC 61.375 60.000 0.00 0.00 0.00 5.19
3966 8701 0.252479 CTTGTGATGCTGAGAGGCCT 59.748 55.000 3.86 3.86 0.00 5.19
3967 8702 1.483827 CTTGTGATGCTGAGAGGCCTA 59.516 52.381 4.42 0.00 0.00 3.93
3968 8703 1.571955 TGTGATGCTGAGAGGCCTAA 58.428 50.000 4.42 0.00 0.00 2.69
3969 8704 2.121948 TGTGATGCTGAGAGGCCTAAT 58.878 47.619 4.42 0.00 0.00 1.73
3970 8705 3.308401 TGTGATGCTGAGAGGCCTAATA 58.692 45.455 4.42 0.00 0.00 0.98
3971 8706 3.711190 TGTGATGCTGAGAGGCCTAATAA 59.289 43.478 4.42 0.00 0.00 1.40
3972 8707 4.164030 TGTGATGCTGAGAGGCCTAATAAA 59.836 41.667 4.42 0.00 0.00 1.40
3973 8708 4.513318 GTGATGCTGAGAGGCCTAATAAAC 59.487 45.833 4.42 0.00 0.00 2.01
3974 8709 3.560636 TGCTGAGAGGCCTAATAAACC 57.439 47.619 4.42 0.00 0.00 3.27
3975 8710 2.172717 TGCTGAGAGGCCTAATAAACCC 59.827 50.000 4.42 0.00 0.00 4.11
3976 8711 2.807108 GCTGAGAGGCCTAATAAACCCG 60.807 54.545 4.42 0.00 0.00 5.28
3977 8712 1.766496 TGAGAGGCCTAATAAACCCGG 59.234 52.381 4.42 0.00 0.00 5.73
3978 8713 2.044758 GAGAGGCCTAATAAACCCGGA 58.955 52.381 4.42 0.00 0.00 5.14
3979 8714 1.767088 AGAGGCCTAATAAACCCGGAC 59.233 52.381 4.42 0.00 0.00 4.79
3980 8715 0.466963 AGGCCTAATAAACCCGGACG 59.533 55.000 1.29 0.00 0.00 4.79
3981 8716 0.533531 GGCCTAATAAACCCGGACGG 60.534 60.000 0.73 3.25 37.81 4.79
3982 8717 0.465287 GCCTAATAAACCCGGACGGA 59.535 55.000 13.13 0.00 37.50 4.69
3983 8718 1.539712 GCCTAATAAACCCGGACGGAG 60.540 57.143 13.13 5.04 37.50 4.63
3984 8719 1.069668 CCTAATAAACCCGGACGGAGG 59.930 57.143 13.13 5.18 37.50 4.30
3991 8726 3.444737 CCGGACGGAGGGAGTATG 58.555 66.667 4.40 0.00 37.50 2.39
4106 8842 7.665559 ACGGTGCCATACTCAAATATTATGAAT 59.334 33.333 0.00 0.00 0.00 2.57
4165 8901 3.057337 GGTGACCTACAGCGGTGT 58.943 61.111 25.12 25.12 37.42 4.16
4166 8902 2.269978 GGTGACCTACAGCGGTGTA 58.730 57.895 24.65 24.65 37.42 2.90
4189 8925 2.045926 AAGGTGAGATGCGGTGGC 60.046 61.111 0.00 0.00 40.52 5.01
4213 10537 6.292919 GCAGCTAGAAAAAGAAGAAACTCGAA 60.293 38.462 0.00 0.00 0.00 3.71
4214 10538 7.630924 CAGCTAGAAAAAGAAGAAACTCGAAA 58.369 34.615 0.00 0.00 0.00 3.46
4241 10565 2.097304 CGGATGAATCAACAATGGCGAA 59.903 45.455 0.00 0.00 0.00 4.70
4262 10593 1.519408 CGTTTCACCTTGATTCCGGT 58.481 50.000 0.00 0.00 0.00 5.28
4293 10624 2.973600 CCGAACGGGCAAAACGGA 60.974 61.111 5.25 0.00 45.31 4.69
4300 10631 3.431725 GGCAAAACGGAGGCGGAG 61.432 66.667 0.00 0.00 0.00 4.63
4301 10632 3.431725 GCAAAACGGAGGCGGAGG 61.432 66.667 0.00 0.00 0.00 4.30
4302 10633 2.746277 CAAAACGGAGGCGGAGGG 60.746 66.667 0.00 0.00 0.00 4.30
4303 10634 4.717313 AAAACGGAGGCGGAGGGC 62.717 66.667 0.00 0.00 42.51 5.19
4311 10642 4.883354 GGCGGAGGGCAAGGGATG 62.883 72.222 0.00 0.00 46.16 3.51
4312 10643 4.115199 GCGGAGGGCAAGGGATGT 62.115 66.667 0.00 0.00 42.87 3.06
4313 10644 2.742116 GCGGAGGGCAAGGGATGTA 61.742 63.158 0.00 0.00 42.87 2.29
4314 10645 1.146263 CGGAGGGCAAGGGATGTAC 59.854 63.158 0.00 0.00 0.00 2.90
4315 10646 1.622607 CGGAGGGCAAGGGATGTACA 61.623 60.000 0.00 0.00 0.00 2.90
4316 10647 0.107165 GGAGGGCAAGGGATGTACAC 60.107 60.000 0.00 0.00 0.00 2.90
4317 10648 0.618458 GAGGGCAAGGGATGTACACA 59.382 55.000 0.00 0.00 0.00 3.72
4318 10649 1.004277 GAGGGCAAGGGATGTACACAA 59.996 52.381 0.00 0.00 0.00 3.33
4319 10650 1.173913 GGGCAAGGGATGTACACAAC 58.826 55.000 0.00 0.00 0.00 3.32
4320 10651 0.802494 GGCAAGGGATGTACACAACG 59.198 55.000 0.00 0.00 0.00 4.10
4322 10653 1.609580 GCAAGGGATGTACACAACGGA 60.610 52.381 0.00 0.00 0.00 4.69
4323 10654 2.346803 CAAGGGATGTACACAACGGAG 58.653 52.381 0.00 0.00 0.00 4.63
4325 10656 1.275291 AGGGATGTACACAACGGAGTG 59.725 52.381 0.00 7.81 45.00 3.51
4326 10657 1.674817 GGGATGTACACAACGGAGTGG 60.675 57.143 13.04 0.00 45.00 4.00
4327 10658 1.076332 GATGTACACAACGGAGTGGC 58.924 55.000 13.04 6.84 45.00 5.01
4328 10659 0.394938 ATGTACACAACGGAGTGGCA 59.605 50.000 13.04 11.26 45.00 4.92
4329 10660 0.249699 TGTACACAACGGAGTGGCAG 60.250 55.000 13.04 0.00 45.00 4.85
4330 10661 0.949105 GTACACAACGGAGTGGCAGG 60.949 60.000 13.04 0.00 45.00 4.85
4332 10663 4.643387 ACAACGGAGTGGCAGGGC 62.643 66.667 0.00 0.00 45.00 5.19
4366 10697 3.793144 GGAGGCGCGCTGACAAAG 61.793 66.667 32.29 0.00 0.00 2.77
4367 10698 2.738521 GAGGCGCGCTGACAAAGA 60.739 61.111 32.29 0.00 0.00 2.52
4370 10701 2.575262 GCGCGCTGACAAAGATGC 60.575 61.111 26.67 0.00 0.00 3.91
4371 10702 2.862436 CGCGCTGACAAAGATGCA 59.138 55.556 5.56 0.00 0.00 3.96
4373 10704 1.513586 GCGCTGACAAAGATGCAGC 60.514 57.895 0.00 0.00 45.28 5.25
4374 10705 4.759564 GCTGACAAAGATGCAGCG 57.240 55.556 0.00 0.00 42.47 5.18
4376 10707 1.136147 CTGACAAAGATGCAGCGGC 59.864 57.895 0.31 0.31 41.68 6.53
4378 10709 2.282391 ACAAAGATGCAGCGGCCA 60.282 55.556 6.32 0.00 40.13 5.36
4379 10710 1.660560 GACAAAGATGCAGCGGCCAT 61.661 55.000 6.32 0.00 40.13 4.40
4380 10711 1.226859 CAAAGATGCAGCGGCCATG 60.227 57.895 6.32 1.19 40.13 3.66
4381 10712 3.072486 AAAGATGCAGCGGCCATGC 62.072 57.895 20.41 20.41 44.11 4.06
4393 10724 4.193334 CCATGCGGACGCGAGAGA 62.193 66.667 15.93 0.00 45.51 3.10
4395 10726 2.824489 ATGCGGACGCGAGAGAGA 60.824 61.111 15.93 0.00 45.51 3.10
4396 10727 2.829206 ATGCGGACGCGAGAGAGAG 61.829 63.158 15.93 0.00 45.51 3.20
4398 10729 4.244802 CGGACGCGAGAGAGAGCC 62.245 72.222 15.93 0.00 33.96 4.70
4399 10730 4.244802 GGACGCGAGAGAGAGCCG 62.245 72.222 15.93 0.00 33.96 5.52
4400 10731 4.897856 GACGCGAGAGAGAGCCGC 62.898 72.222 15.93 0.00 44.81 6.53
4407 10738 0.530288 GAGAGAGAGCCGCAGAGTTT 59.470 55.000 0.00 0.00 0.00 2.66
4409 10740 2.164624 GAGAGAGAGCCGCAGAGTTTTA 59.835 50.000 0.00 0.00 0.00 1.52
4410 10741 2.094442 AGAGAGAGCCGCAGAGTTTTAC 60.094 50.000 0.00 0.00 0.00 2.01
4411 10742 1.896465 AGAGAGCCGCAGAGTTTTACT 59.104 47.619 0.00 0.00 0.00 2.24
4413 10744 2.413453 GAGAGCCGCAGAGTTTTACTTG 59.587 50.000 0.00 0.00 0.00 3.16
4415 10746 2.143925 AGCCGCAGAGTTTTACTTGAC 58.856 47.619 0.00 0.00 0.00 3.18
4416 10747 1.197036 GCCGCAGAGTTTTACTTGACC 59.803 52.381 0.00 0.00 0.00 4.02
4417 10748 1.459592 CCGCAGAGTTTTACTTGACCG 59.540 52.381 0.00 0.00 0.00 4.79
4418 10749 1.136336 CGCAGAGTTTTACTTGACCGC 60.136 52.381 0.00 0.00 0.00 5.68
4419 10750 1.136336 GCAGAGTTTTACTTGACCGCG 60.136 52.381 0.00 0.00 0.00 6.46
4420 10751 2.132762 CAGAGTTTTACTTGACCGCGT 58.867 47.619 4.92 0.00 0.00 6.01
4421 10752 3.311106 CAGAGTTTTACTTGACCGCGTA 58.689 45.455 4.92 0.00 0.00 4.42
4423 10754 4.031426 CAGAGTTTTACTTGACCGCGTATC 59.969 45.833 4.92 2.54 0.00 2.24
4424 10755 2.919229 AGTTTTACTTGACCGCGTATCG 59.081 45.455 4.92 0.00 38.08 2.92
4435 10766 1.912001 CGCGTATCGGTGGAGTAAAA 58.088 50.000 0.00 0.00 33.78 1.52
4436 10767 1.850441 CGCGTATCGGTGGAGTAAAAG 59.150 52.381 0.00 0.00 33.78 2.27
4438 10769 3.487376 CGCGTATCGGTGGAGTAAAAGTA 60.487 47.826 0.00 0.00 33.78 2.24
4441 10772 4.498682 CGTATCGGTGGAGTAAAAGTAGGG 60.499 50.000 0.00 0.00 0.00 3.53
4442 10773 3.173953 TCGGTGGAGTAAAAGTAGGGA 57.826 47.619 0.00 0.00 0.00 4.20
4444 10775 3.903090 TCGGTGGAGTAAAAGTAGGGAAA 59.097 43.478 0.00 0.00 0.00 3.13
4445 10776 4.533311 TCGGTGGAGTAAAAGTAGGGAAAT 59.467 41.667 0.00 0.00 0.00 2.17
4446 10777 5.013391 TCGGTGGAGTAAAAGTAGGGAAATT 59.987 40.000 0.00 0.00 0.00 1.82
4447 10778 5.708697 CGGTGGAGTAAAAGTAGGGAAATTT 59.291 40.000 0.00 0.00 0.00 1.82
4448 10779 6.208007 CGGTGGAGTAAAAGTAGGGAAATTTT 59.792 38.462 0.00 0.00 0.00 1.82
4449 10780 7.255695 CGGTGGAGTAAAAGTAGGGAAATTTTT 60.256 37.037 0.00 0.00 0.00 1.94
4470 10801 7.933728 TTTTTGAGCCGGAGTAAAAATTTAC 57.066 32.000 5.05 7.77 42.50 2.01
4483 10814 4.572950 AAAATTTACTCGACTAACCGCG 57.427 40.909 0.00 0.00 0.00 6.46
4484 10815 2.199291 ATTTACTCGACTAACCGCGG 57.801 50.000 26.86 26.86 0.00 6.46
4485 10816 1.164411 TTTACTCGACTAACCGCGGA 58.836 50.000 35.90 9.83 0.00 5.54
4486 10817 1.382522 TTACTCGACTAACCGCGGAT 58.617 50.000 35.90 24.93 0.00 4.18
4487 10818 2.238942 TACTCGACTAACCGCGGATA 57.761 50.000 35.90 24.65 0.00 2.59
4488 10819 0.942962 ACTCGACTAACCGCGGATAG 59.057 55.000 33.34 33.34 0.00 2.08
4489 10820 0.237761 CTCGACTAACCGCGGATAGG 59.762 60.000 36.21 23.89 0.00 2.57
4490 10821 1.168407 TCGACTAACCGCGGATAGGG 61.168 60.000 36.21 28.65 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.839946 CGAGGATTGGGGGTCTTGAT 59.160 55.000 0.00 0.00 0.00 2.57
1 2 0.252513 TCGAGGATTGGGGGTCTTGA 60.253 55.000 0.00 0.00 0.00 3.02
3 4 1.627297 GCTCGAGGATTGGGGGTCTT 61.627 60.000 15.58 0.00 0.00 3.01
201 600 3.809832 CCTATGTGTAATCCTTTCGCCTG 59.190 47.826 0.00 0.00 0.00 4.85
222 621 7.013464 TCGATCTGAACCTTTATCTTAGTCTCC 59.987 40.741 0.00 0.00 0.00 3.71
227 626 7.585867 TCGATCGATCTGAACCTTTATCTTAG 58.414 38.462 22.43 1.70 0.00 2.18
404 811 1.108776 CATGGCCTTCATCAAGTGGG 58.891 55.000 3.32 0.00 32.92 4.61
431 1024 4.569564 AGTAAGAACAAACGAGACCACAAC 59.430 41.667 0.00 0.00 0.00 3.32
467 1060 8.848474 TCTTGGTGACCAAAAATTTAAAACAA 57.152 26.923 18.85 0.00 43.44 2.83
579 4928 3.005050 TCTTTTGATCTTTGCAGGCTGTG 59.995 43.478 17.16 4.62 0.00 3.66
580 4929 3.225104 TCTTTTGATCTTTGCAGGCTGT 58.775 40.909 17.16 0.00 0.00 4.40
618 4967 6.435430 AAATCAAAAGAGCCAACCAAAAAC 57.565 33.333 0.00 0.00 0.00 2.43
688 5037 5.890419 AGAAACCAGATGATTGATTCTTCCC 59.110 40.000 0.00 0.00 30.58 3.97
857 5218 7.912250 CACAAACTCCTGCTATTGATGTTATTC 59.088 37.037 0.00 0.00 0.00 1.75
881 5328 3.745803 GCTGCTGCTCCTTGGCAC 61.746 66.667 8.53 0.00 37.29 5.01
943 5394 2.927580 AACACCGAGCGTCCGACAT 61.928 57.895 0.00 0.00 0.00 3.06
988 5449 1.096967 TAAGATGTGCGCCATGGCAG 61.097 55.000 34.93 26.77 44.93 4.85
999 5460 1.920574 CGTCTCCGTGCTTAAGATGTG 59.079 52.381 6.67 0.00 0.00 3.21
1073 5552 1.230650 TCCCTCTCCCTCTCCCTCA 60.231 63.158 0.00 0.00 0.00 3.86
1074 5553 1.541672 CTCCCTCTCCCTCTCCCTC 59.458 68.421 0.00 0.00 0.00 4.30
1115 5610 3.917760 GAGACCCATCTCCGGCCG 61.918 72.222 21.04 21.04 45.06 6.13
1153 5648 3.007920 AGCTGCCACTCCTCCCAG 61.008 66.667 0.00 0.00 0.00 4.45
1755 6322 3.429141 AGCTCGCTGTGCACATGC 61.429 61.111 22.00 22.77 42.50 4.06
1756 6323 2.479198 CAGCTCGCTGTGCACATG 59.521 61.111 22.00 16.12 39.10 3.21
2078 6747 2.223923 TGTTGTAACCATGCTTGTTGCC 60.224 45.455 0.00 0.00 42.00 4.52
2359 7040 2.111999 TTTCGTAGGCTGCAGGCACT 62.112 55.000 37.94 23.17 44.01 4.40
2418 7102 2.031682 GCGGCATCAGTTATGAATGTCC 60.032 50.000 0.00 0.00 39.39 4.02
2422 7106 1.949525 GTGGCGGCATCAGTTATGAAT 59.050 47.619 17.19 0.00 39.39 2.57
2490 7174 1.174712 CCCTGTTGGTGCTTCACTGG 61.175 60.000 0.00 0.00 34.40 4.00
2660 7347 3.893521 TGTAGTCGGACATCTCCATACA 58.106 45.455 11.27 5.58 36.12 2.29
2784 7471 0.407139 ATCCTGGAGCTTTGCCTTGT 59.593 50.000 1.52 0.00 0.00 3.16
2847 7534 4.453478 TGCAAGCTTTGTGAATCAGAGTAG 59.547 41.667 0.00 0.00 31.84 2.57
2875 7562 3.144506 CAGGTCCATCAATGACATAGCC 58.855 50.000 0.00 0.00 0.00 3.93
3248 7935 9.269453 CTAAAAAGTCTTATATTAGGGAACGGG 57.731 37.037 0.00 0.00 0.00 5.28
3367 8101 2.799412 CCGCTCTTGCAAGATCATACTC 59.201 50.000 28.57 11.10 39.64 2.59
3372 8106 1.746615 GGCCGCTCTTGCAAGATCA 60.747 57.895 28.57 7.89 39.64 2.92
3406 8140 2.307496 TGAAATGAACATGGTGGCCT 57.693 45.000 3.32 0.00 0.00 5.19
3431 8166 7.936847 TCATAGGAATACAAATAACATCCGCTT 59.063 33.333 0.00 0.00 32.22 4.68
3499 8234 3.120041 GCATACGCACAACCTTTTTGTT 58.880 40.909 0.00 0.00 38.36 2.83
3500 8235 2.360801 AGCATACGCACAACCTTTTTGT 59.639 40.909 0.00 0.00 42.27 2.83
3547 8282 9.373750 CGCATTACATCACATATTTTCTTACAG 57.626 33.333 0.00 0.00 0.00 2.74
3594 8329 2.851805 AAGCATTAAAAGCTAGCGGC 57.148 45.000 9.55 5.92 42.53 6.53
3639 8374 5.068198 CAGATTAAGCAGTACAATTGGCCAT 59.932 40.000 6.09 0.00 0.00 4.40
3652 8387 6.589523 GCTATCATGGTCTACAGATTAAGCAG 59.410 42.308 0.00 0.00 0.00 4.24
3697 8432 1.069668 CCTAATAAACCCGGACGGAGG 59.930 57.143 13.13 5.18 37.50 4.30
3698 8433 1.539712 GCCTAATAAACCCGGACGGAG 60.540 57.143 13.13 5.04 37.50 4.63
3699 8434 0.465287 GCCTAATAAACCCGGACGGA 59.535 55.000 13.13 0.00 37.50 4.69
3700 8435 0.533531 GGCCTAATAAACCCGGACGG 60.534 60.000 0.73 3.25 37.81 4.79
3701 8436 0.466963 AGGCCTAATAAACCCGGACG 59.533 55.000 1.29 0.00 0.00 4.79
3702 8437 3.843893 TTAGGCCTAATAAACCCGGAC 57.156 47.619 21.68 0.00 0.00 4.79
3703 8438 4.039339 TCTTTAGGCCTAATAAACCCGGA 58.961 43.478 25.70 6.80 0.00 5.14
3704 8439 4.132336 GTCTTTAGGCCTAATAAACCCGG 58.868 47.826 25.70 8.87 0.00 5.73
3705 8440 4.773013 TGTCTTTAGGCCTAATAAACCCG 58.227 43.478 25.70 8.69 0.00 5.28
3706 8441 6.185511 AGTTGTCTTTAGGCCTAATAAACCC 58.814 40.000 25.70 15.18 0.00 4.11
3707 8442 7.610692 AGAAGTTGTCTTTAGGCCTAATAAACC 59.389 37.037 25.70 12.16 29.66 3.27
3708 8443 8.563123 AGAAGTTGTCTTTAGGCCTAATAAAC 57.437 34.615 25.70 22.86 29.66 2.01
3709 8444 8.603304 AGAGAAGTTGTCTTTAGGCCTAATAAA 58.397 33.333 25.70 12.32 36.41 1.40
3710 8445 8.147244 AGAGAAGTTGTCTTTAGGCCTAATAA 57.853 34.615 25.70 13.92 36.41 1.40
3711 8446 7.735326 AGAGAAGTTGTCTTTAGGCCTAATA 57.265 36.000 25.70 14.28 36.41 0.98
3712 8447 6.628644 AGAGAAGTTGTCTTTAGGCCTAAT 57.371 37.500 25.70 8.38 36.41 1.73
3713 8448 6.435292 AAGAGAAGTTGTCTTTAGGCCTAA 57.565 37.500 21.68 21.68 36.41 2.69
3714 8449 6.952358 TCTAAGAGAAGTTGTCTTTAGGCCTA 59.048 38.462 19.27 8.91 36.41 3.93
3715 8450 4.984146 AAGAGAAGTTGTCTTTAGGCCT 57.016 40.909 11.78 11.78 36.41 5.19
3716 8451 5.870433 GTCTAAGAGAAGTTGTCTTTAGGCC 59.130 44.000 19.27 0.00 36.41 5.19
3717 8452 5.870433 GGTCTAAGAGAAGTTGTCTTTAGGC 59.130 44.000 19.27 14.77 36.41 3.93
3718 8453 6.994221 TGGTCTAAGAGAAGTTGTCTTTAGG 58.006 40.000 19.27 10.83 36.41 2.69
3719 8454 8.361139 TCTTGGTCTAAGAGAAGTTGTCTTTAG 58.639 37.037 19.27 13.96 40.43 1.85
3720 8455 8.142551 GTCTTGGTCTAAGAGAAGTTGTCTTTA 58.857 37.037 19.27 6.94 45.71 1.85
3721 8456 6.987404 GTCTTGGTCTAAGAGAAGTTGTCTTT 59.013 38.462 19.27 5.49 45.71 2.52
3722 8457 6.098409 TGTCTTGGTCTAAGAGAAGTTGTCTT 59.902 38.462 18.27 18.27 45.71 3.01
3723 8458 5.598830 TGTCTTGGTCTAAGAGAAGTTGTCT 59.401 40.000 0.00 0.00 45.71 3.41
3724 8459 5.692654 GTGTCTTGGTCTAAGAGAAGTTGTC 59.307 44.000 0.00 0.00 45.71 3.18
3725 8460 5.128827 TGTGTCTTGGTCTAAGAGAAGTTGT 59.871 40.000 0.00 0.00 45.71 3.32
3726 8461 5.601662 TGTGTCTTGGTCTAAGAGAAGTTG 58.398 41.667 0.00 0.00 45.71 3.16
3727 8462 5.871396 TGTGTCTTGGTCTAAGAGAAGTT 57.129 39.130 0.00 0.00 45.71 2.66
3728 8463 6.722129 ACTATGTGTCTTGGTCTAAGAGAAGT 59.278 38.462 0.00 0.00 45.71 3.01
3729 8464 7.164230 ACTATGTGTCTTGGTCTAAGAGAAG 57.836 40.000 0.00 0.00 45.71 2.85
3730 8465 8.645814 TTACTATGTGTCTTGGTCTAAGAGAA 57.354 34.615 0.00 0.00 45.71 2.87
3731 8466 8.824756 ATTACTATGTGTCTTGGTCTAAGAGA 57.175 34.615 0.00 0.00 45.71 3.10
3732 8467 9.877178 AAATTACTATGTGTCTTGGTCTAAGAG 57.123 33.333 0.00 0.00 45.71 2.85
3733 8468 9.653287 CAAATTACTATGTGTCTTGGTCTAAGA 57.347 33.333 0.00 0.00 43.01 2.10
3734 8469 8.391106 GCAAATTACTATGTGTCTTGGTCTAAG 58.609 37.037 0.00 0.00 37.76 2.18
3735 8470 8.100791 AGCAAATTACTATGTGTCTTGGTCTAA 58.899 33.333 0.00 0.00 0.00 2.10
3736 8471 7.620880 AGCAAATTACTATGTGTCTTGGTCTA 58.379 34.615 0.00 0.00 0.00 2.59
3737 8472 6.476378 AGCAAATTACTATGTGTCTTGGTCT 58.524 36.000 0.00 0.00 0.00 3.85
3738 8473 6.371548 TGAGCAAATTACTATGTGTCTTGGTC 59.628 38.462 0.00 0.00 38.90 4.02
3739 8474 6.149474 GTGAGCAAATTACTATGTGTCTTGGT 59.851 38.462 0.00 0.00 0.00 3.67
3740 8475 6.149308 TGTGAGCAAATTACTATGTGTCTTGG 59.851 38.462 0.00 0.00 0.00 3.61
3741 8476 7.132694 TGTGAGCAAATTACTATGTGTCTTG 57.867 36.000 0.00 0.00 0.00 3.02
3742 8477 7.928307 ATGTGAGCAAATTACTATGTGTCTT 57.072 32.000 0.00 0.00 0.00 3.01
3743 8478 7.928307 AATGTGAGCAAATTACTATGTGTCT 57.072 32.000 0.00 0.00 0.00 3.41
3751 8486 9.023962 TGGAAGAATTAATGTGAGCAAATTACT 57.976 29.630 0.00 0.00 0.00 2.24
3752 8487 9.807649 ATGGAAGAATTAATGTGAGCAAATTAC 57.192 29.630 0.00 0.00 0.00 1.89
3754 8489 9.374838 GAATGGAAGAATTAATGTGAGCAAATT 57.625 29.630 0.00 0.00 0.00 1.82
3755 8490 7.983484 GGAATGGAAGAATTAATGTGAGCAAAT 59.017 33.333 0.00 0.00 0.00 2.32
3756 8491 7.039152 TGGAATGGAAGAATTAATGTGAGCAAA 60.039 33.333 0.00 0.00 0.00 3.68
3757 8492 6.436847 TGGAATGGAAGAATTAATGTGAGCAA 59.563 34.615 0.00 0.00 0.00 3.91
3758 8493 5.951148 TGGAATGGAAGAATTAATGTGAGCA 59.049 36.000 0.00 0.00 0.00 4.26
3759 8494 6.096001 AGTGGAATGGAAGAATTAATGTGAGC 59.904 38.462 0.00 0.00 0.00 4.26
3760 8495 7.201767 GGAGTGGAATGGAAGAATTAATGTGAG 60.202 40.741 0.00 0.00 0.00 3.51
3761 8496 6.603201 GGAGTGGAATGGAAGAATTAATGTGA 59.397 38.462 0.00 0.00 0.00 3.58
3762 8497 6.183360 GGGAGTGGAATGGAAGAATTAATGTG 60.183 42.308 0.00 0.00 0.00 3.21
3763 8498 5.893824 GGGAGTGGAATGGAAGAATTAATGT 59.106 40.000 0.00 0.00 0.00 2.71
3764 8499 5.893255 TGGGAGTGGAATGGAAGAATTAATG 59.107 40.000 0.00 0.00 0.00 1.90
3765 8500 6.091076 TGGGAGTGGAATGGAAGAATTAAT 57.909 37.500 0.00 0.00 0.00 1.40
3766 8501 5.528600 TGGGAGTGGAATGGAAGAATTAA 57.471 39.130 0.00 0.00 0.00 1.40
3767 8502 5.528600 TTGGGAGTGGAATGGAAGAATTA 57.471 39.130 0.00 0.00 0.00 1.40
3768 8503 4.402616 TTGGGAGTGGAATGGAAGAATT 57.597 40.909 0.00 0.00 0.00 2.17
3769 8504 4.284178 CATTGGGAGTGGAATGGAAGAAT 58.716 43.478 0.00 0.00 0.00 2.40
3770 8505 3.700538 CATTGGGAGTGGAATGGAAGAA 58.299 45.455 0.00 0.00 0.00 2.52
3771 8506 2.621407 GCATTGGGAGTGGAATGGAAGA 60.621 50.000 0.00 0.00 31.38 2.87
3772 8507 1.753073 GCATTGGGAGTGGAATGGAAG 59.247 52.381 0.00 0.00 31.38 3.46
3773 8508 1.076841 TGCATTGGGAGTGGAATGGAA 59.923 47.619 0.00 0.00 31.38 3.53
3774 8509 0.703488 TGCATTGGGAGTGGAATGGA 59.297 50.000 0.00 0.00 31.38 3.41
3775 8510 0.819582 GTGCATTGGGAGTGGAATGG 59.180 55.000 0.00 0.00 31.38 3.16
3776 8511 1.747355 GAGTGCATTGGGAGTGGAATG 59.253 52.381 0.00 0.00 33.46 2.67
3777 8512 1.637553 AGAGTGCATTGGGAGTGGAAT 59.362 47.619 0.00 0.00 0.00 3.01
3778 8513 1.003580 GAGAGTGCATTGGGAGTGGAA 59.996 52.381 0.00 0.00 0.00 3.53
3779 8514 0.615331 GAGAGTGCATTGGGAGTGGA 59.385 55.000 0.00 0.00 0.00 4.02
3780 8515 0.617413 AGAGAGTGCATTGGGAGTGG 59.383 55.000 0.00 0.00 0.00 4.00
3781 8516 1.277273 TGAGAGAGTGCATTGGGAGTG 59.723 52.381 0.00 0.00 0.00 3.51
3782 8517 1.277557 GTGAGAGAGTGCATTGGGAGT 59.722 52.381 0.00 0.00 0.00 3.85
3783 8518 1.277273 TGTGAGAGAGTGCATTGGGAG 59.723 52.381 0.00 0.00 0.00 4.30
3784 8519 1.351076 TGTGAGAGAGTGCATTGGGA 58.649 50.000 0.00 0.00 0.00 4.37
3785 8520 2.014857 CATGTGAGAGAGTGCATTGGG 58.985 52.381 0.00 0.00 0.00 4.12
3786 8521 1.400846 GCATGTGAGAGAGTGCATTGG 59.599 52.381 0.00 0.00 37.52 3.16
3787 8522 2.081462 TGCATGTGAGAGAGTGCATTG 58.919 47.619 0.00 0.00 42.13 2.82
3788 8523 2.484742 TGCATGTGAGAGAGTGCATT 57.515 45.000 0.00 0.00 42.13 3.56
3791 8526 0.377554 GCATGCATGTGAGAGAGTGC 59.622 55.000 26.79 7.20 38.05 4.40
3792 8527 1.666189 CTGCATGCATGTGAGAGAGTG 59.334 52.381 26.79 0.21 0.00 3.51
3793 8528 2.012554 GCTGCATGCATGTGAGAGAGT 61.013 52.381 26.79 0.00 42.31 3.24
3794 8529 0.658368 GCTGCATGCATGTGAGAGAG 59.342 55.000 26.79 7.15 42.31 3.20
3795 8530 0.746923 GGCTGCATGCATGTGAGAGA 60.747 55.000 26.79 4.82 45.15 3.10
3796 8531 1.029947 TGGCTGCATGCATGTGAGAG 61.030 55.000 26.79 17.66 45.15 3.20
3797 8532 0.609681 TTGGCTGCATGCATGTGAGA 60.610 50.000 26.79 8.79 45.15 3.27
3798 8533 0.459899 ATTGGCTGCATGCATGTGAG 59.540 50.000 26.79 22.09 45.15 3.51
3799 8534 0.174617 CATTGGCTGCATGCATGTGA 59.825 50.000 26.79 13.57 45.15 3.58
3800 8535 0.174617 TCATTGGCTGCATGCATGTG 59.825 50.000 26.79 20.03 45.15 3.21
3801 8536 0.899019 TTCATTGGCTGCATGCATGT 59.101 45.000 26.79 3.11 45.15 3.21
3802 8537 2.017138 TTTCATTGGCTGCATGCATG 57.983 45.000 22.97 22.70 45.15 4.06
3803 8538 2.772077 TTTTCATTGGCTGCATGCAT 57.228 40.000 22.97 2.13 45.15 3.96
3804 8539 2.418692 CTTTTTCATTGGCTGCATGCA 58.581 42.857 21.29 21.29 45.15 3.96
3805 8540 1.129811 GCTTTTTCATTGGCTGCATGC 59.870 47.619 11.82 11.82 41.94 4.06
3806 8541 2.158841 GTGCTTTTTCATTGGCTGCATG 59.841 45.455 0.50 0.00 0.00 4.06
3807 8542 2.224329 TGTGCTTTTTCATTGGCTGCAT 60.224 40.909 0.50 0.00 0.00 3.96
3808 8543 1.138464 TGTGCTTTTTCATTGGCTGCA 59.862 42.857 0.50 0.00 0.00 4.41
3809 8544 1.528161 GTGTGCTTTTTCATTGGCTGC 59.472 47.619 0.00 0.00 0.00 5.25
3810 8545 2.823984 TGTGTGCTTTTTCATTGGCTG 58.176 42.857 0.00 0.00 0.00 4.85
3811 8546 3.069872 TCATGTGTGCTTTTTCATTGGCT 59.930 39.130 0.00 0.00 0.00 4.75
3812 8547 3.391965 TCATGTGTGCTTTTTCATTGGC 58.608 40.909 0.00 0.00 0.00 4.52
3813 8548 5.050634 CACTTCATGTGTGCTTTTTCATTGG 60.051 40.000 8.22 0.00 41.53 3.16
3814 8549 5.969741 CACTTCATGTGTGCTTTTTCATTG 58.030 37.500 8.22 0.00 41.53 2.82
3828 8563 8.076178 GCTGAAAAGTTAATACACACTTCATGT 58.924 33.333 0.00 0.00 44.81 3.21
3829 8564 7.538678 GGCTGAAAAGTTAATACACACTTCATG 59.461 37.037 0.00 0.00 31.79 3.07
3830 8565 7.230510 TGGCTGAAAAGTTAATACACACTTCAT 59.769 33.333 0.00 0.00 31.79 2.57
3831 8566 6.544197 TGGCTGAAAAGTTAATACACACTTCA 59.456 34.615 0.00 0.00 31.79 3.02
3832 8567 6.966021 TGGCTGAAAAGTTAATACACACTTC 58.034 36.000 0.00 0.00 31.79 3.01
3833 8568 6.952773 TGGCTGAAAAGTTAATACACACTT 57.047 33.333 0.00 0.00 34.58 3.16
3834 8569 6.071952 CCATGGCTGAAAAGTTAATACACACT 60.072 38.462 0.00 0.00 0.00 3.55
3835 8570 6.092748 CCATGGCTGAAAAGTTAATACACAC 58.907 40.000 0.00 0.00 0.00 3.82
3836 8571 5.336372 GCCATGGCTGAAAAGTTAATACACA 60.336 40.000 29.98 0.00 38.26 3.72
3837 8572 5.102313 GCCATGGCTGAAAAGTTAATACAC 58.898 41.667 29.98 0.00 38.26 2.90
3838 8573 4.769488 TGCCATGGCTGAAAAGTTAATACA 59.231 37.500 35.53 8.25 42.51 2.29
3839 8574 5.102313 GTGCCATGGCTGAAAAGTTAATAC 58.898 41.667 35.53 17.60 42.51 1.89
3840 8575 4.159506 GGTGCCATGGCTGAAAAGTTAATA 59.840 41.667 35.53 9.43 42.51 0.98
3841 8576 3.055891 GGTGCCATGGCTGAAAAGTTAAT 60.056 43.478 35.53 0.00 42.51 1.40
3842 8577 2.298729 GGTGCCATGGCTGAAAAGTTAA 59.701 45.455 35.53 10.21 42.51 2.01
3843 8578 1.892474 GGTGCCATGGCTGAAAAGTTA 59.108 47.619 35.53 11.01 42.51 2.24
3844 8579 0.681175 GGTGCCATGGCTGAAAAGTT 59.319 50.000 35.53 0.00 42.51 2.66
3845 8580 0.469705 TGGTGCCATGGCTGAAAAGT 60.470 50.000 35.53 0.00 42.51 2.66
3846 8581 0.680618 TTGGTGCCATGGCTGAAAAG 59.319 50.000 35.53 0.00 42.51 2.27
3847 8582 0.392336 GTTGGTGCCATGGCTGAAAA 59.608 50.000 35.53 21.39 42.51 2.29
3848 8583 0.758310 TGTTGGTGCCATGGCTGAAA 60.758 50.000 35.53 23.07 42.51 2.69
3849 8584 0.758310 TTGTTGGTGCCATGGCTGAA 60.758 50.000 35.53 22.05 42.51 3.02
3850 8585 1.152589 TTGTTGGTGCCATGGCTGA 60.153 52.632 35.53 15.87 42.51 4.26
3851 8586 1.005867 GTTGTTGGTGCCATGGCTG 60.006 57.895 35.53 0.00 42.51 4.85
3852 8587 1.047596 TTGTTGTTGGTGCCATGGCT 61.048 50.000 35.53 0.00 42.51 4.75
3853 8588 0.035176 ATTGTTGTTGGTGCCATGGC 59.965 50.000 30.54 30.54 42.35 4.40
3854 8589 2.674747 GCTATTGTTGTTGGTGCCATGG 60.675 50.000 7.63 7.63 0.00 3.66
3855 8590 2.231964 AGCTATTGTTGTTGGTGCCATG 59.768 45.455 0.00 0.00 0.00 3.66
3856 8591 2.528564 AGCTATTGTTGTTGGTGCCAT 58.471 42.857 0.00 0.00 0.00 4.40
3857 8592 1.993956 AGCTATTGTTGTTGGTGCCA 58.006 45.000 0.00 0.00 0.00 4.92
3858 8593 3.243704 TGAAAGCTATTGTTGTTGGTGCC 60.244 43.478 0.00 0.00 0.00 5.01
3859 8594 3.976169 TGAAAGCTATTGTTGTTGGTGC 58.024 40.909 0.00 0.00 0.00 5.01
3860 8595 7.144661 TGTATTGAAAGCTATTGTTGTTGGTG 58.855 34.615 0.00 0.00 0.00 4.17
3861 8596 7.283625 TGTATTGAAAGCTATTGTTGTTGGT 57.716 32.000 0.00 0.00 0.00 3.67
3862 8597 7.116233 GGTTGTATTGAAAGCTATTGTTGTTGG 59.884 37.037 0.00 0.00 0.00 3.77
3863 8598 7.651304 TGGTTGTATTGAAAGCTATTGTTGTTG 59.349 33.333 0.00 0.00 0.00 3.33
3864 8599 7.721402 TGGTTGTATTGAAAGCTATTGTTGTT 58.279 30.769 0.00 0.00 0.00 2.83
3865 8600 7.283625 TGGTTGTATTGAAAGCTATTGTTGT 57.716 32.000 0.00 0.00 0.00 3.32
3866 8601 8.649841 CATTGGTTGTATTGAAAGCTATTGTTG 58.350 33.333 0.00 0.00 0.00 3.33
3867 8602 8.584157 TCATTGGTTGTATTGAAAGCTATTGTT 58.416 29.630 0.00 0.00 0.00 2.83
3868 8603 8.121305 TCATTGGTTGTATTGAAAGCTATTGT 57.879 30.769 0.00 0.00 0.00 2.71
3869 8604 8.984891 TTCATTGGTTGTATTGAAAGCTATTG 57.015 30.769 0.00 0.00 0.00 1.90
3871 8606 9.590451 CATTTCATTGGTTGTATTGAAAGCTAT 57.410 29.630 0.00 0.00 40.32 2.97
3872 8607 8.034215 CCATTTCATTGGTTGTATTGAAAGCTA 58.966 33.333 0.00 0.00 40.32 3.32
3873 8608 6.875195 CCATTTCATTGGTTGTATTGAAAGCT 59.125 34.615 0.00 0.00 40.32 3.74
3874 8609 7.064060 CCATTTCATTGGTTGTATTGAAAGC 57.936 36.000 0.00 0.00 40.32 3.51
3887 8622 2.701107 TGCATGCAACCATTTCATTGG 58.299 42.857 20.30 0.00 42.82 3.16
3888 8623 4.271590 CATGCATGCAACCATTTCATTG 57.728 40.909 26.68 10.40 0.00 2.82
3902 8637 1.355971 GTTGGAAAGCTGCATGCATG 58.644 50.000 22.97 22.70 45.94 4.06
3903 8638 0.108992 CGTTGGAAAGCTGCATGCAT 60.109 50.000 22.97 5.92 45.94 3.96
3904 8639 1.286570 CGTTGGAAAGCTGCATGCA 59.713 52.632 21.29 21.29 45.94 3.96
3905 8640 2.090524 GCGTTGGAAAGCTGCATGC 61.091 57.895 11.82 11.82 43.29 4.06
3906 8641 1.444895 GGCGTTGGAAAGCTGCATG 60.445 57.895 1.02 0.00 0.00 4.06
3907 8642 2.964978 GGCGTTGGAAAGCTGCAT 59.035 55.556 1.02 0.00 0.00 3.96
3908 8643 3.659092 CGGCGTTGGAAAGCTGCA 61.659 61.111 1.02 0.00 32.63 4.41
3909 8644 4.404654 CCGGCGTTGGAAAGCTGC 62.405 66.667 6.01 0.00 38.36 5.25
3910 8645 3.737172 CCCGGCGTTGGAAAGCTG 61.737 66.667 6.01 0.00 39.33 4.24
3913 8648 4.955065 TATAAGGCCCGGCGTTGGAAAG 62.955 54.545 24.42 0.00 37.24 2.62
3914 8649 2.487274 ATAAGGCCCGGCGTTGGAAA 62.487 55.000 24.42 7.47 37.24 3.13
3915 8650 1.624479 TATAAGGCCCGGCGTTGGAA 61.624 55.000 24.42 7.81 37.24 3.53
3916 8651 1.624479 TTATAAGGCCCGGCGTTGGA 61.624 55.000 24.42 11.13 37.24 3.53
3917 8652 0.748729 TTTATAAGGCCCGGCGTTGG 60.749 55.000 24.42 1.16 37.24 3.77
3918 8653 1.064952 CTTTTATAAGGCCCGGCGTTG 59.935 52.381 24.42 5.55 37.24 4.10
3919 8654 1.385528 CTTTTATAAGGCCCGGCGTT 58.614 50.000 20.52 20.52 39.89 4.84
3920 8655 0.464916 CCTTTTATAAGGCCCGGCGT 60.465 55.000 6.01 0.00 44.27 5.68
3921 8656 2.327228 CCTTTTATAAGGCCCGGCG 58.673 57.895 0.00 0.00 44.27 6.46
3927 8662 6.620893 ACAAGCATGTCCCCTTTTATAAGGC 61.621 44.000 6.45 0.00 41.99 4.35
3928 8663 4.956075 ACAAGCATGTCCCCTTTTATAAGG 59.044 41.667 5.04 5.04 42.55 2.69
3929 8664 5.652014 TCACAAGCATGTCCCCTTTTATAAG 59.348 40.000 0.00 0.00 37.82 1.73
3930 8665 5.575157 TCACAAGCATGTCCCCTTTTATAA 58.425 37.500 0.00 0.00 37.82 0.98
3931 8666 5.186256 TCACAAGCATGTCCCCTTTTATA 57.814 39.130 0.00 0.00 37.82 0.98
3932 8667 4.046286 TCACAAGCATGTCCCCTTTTAT 57.954 40.909 0.00 0.00 37.82 1.40
3933 8668 3.517296 TCACAAGCATGTCCCCTTTTA 57.483 42.857 0.00 0.00 37.82 1.52
3934 8669 2.380064 TCACAAGCATGTCCCCTTTT 57.620 45.000 0.00 0.00 37.82 2.27
3935 8670 2.173519 CATCACAAGCATGTCCCCTTT 58.826 47.619 0.00 0.00 37.82 3.11
3936 8671 1.843368 CATCACAAGCATGTCCCCTT 58.157 50.000 0.00 0.00 37.82 3.95
3937 8672 0.682209 GCATCACAAGCATGTCCCCT 60.682 55.000 0.00 0.00 37.82 4.79
3938 8673 0.682209 AGCATCACAAGCATGTCCCC 60.682 55.000 0.00 0.00 37.82 4.81
3939 8674 0.454600 CAGCATCACAAGCATGTCCC 59.545 55.000 0.00 0.00 37.82 4.46
3940 8675 1.400846 CTCAGCATCACAAGCATGTCC 59.599 52.381 0.00 0.00 37.82 4.02
3941 8676 2.352034 CTCTCAGCATCACAAGCATGTC 59.648 50.000 0.00 0.00 37.82 3.06
3942 8677 2.357075 CTCTCAGCATCACAAGCATGT 58.643 47.619 0.00 0.00 41.61 3.21
3943 8678 1.671328 CCTCTCAGCATCACAAGCATG 59.329 52.381 0.00 0.00 0.00 4.06
3944 8679 2.017623 GCCTCTCAGCATCACAAGCAT 61.018 52.381 0.00 0.00 0.00 3.79
3945 8680 0.675837 GCCTCTCAGCATCACAAGCA 60.676 55.000 0.00 0.00 0.00 3.91
3946 8681 1.375098 GGCCTCTCAGCATCACAAGC 61.375 60.000 0.00 0.00 0.00 4.01
3947 8682 0.252479 AGGCCTCTCAGCATCACAAG 59.748 55.000 0.00 0.00 0.00 3.16
3948 8683 1.571955 TAGGCCTCTCAGCATCACAA 58.428 50.000 9.68 0.00 0.00 3.33
3949 8684 1.571955 TTAGGCCTCTCAGCATCACA 58.428 50.000 9.68 0.00 0.00 3.58
3950 8685 2.926778 ATTAGGCCTCTCAGCATCAC 57.073 50.000 9.68 0.00 0.00 3.06
3951 8686 4.444876 GGTTTATTAGGCCTCTCAGCATCA 60.445 45.833 9.68 0.00 0.00 3.07
3952 8687 4.068599 GGTTTATTAGGCCTCTCAGCATC 58.931 47.826 9.68 0.00 0.00 3.91
3953 8688 3.181439 GGGTTTATTAGGCCTCTCAGCAT 60.181 47.826 9.68 0.00 0.00 3.79
3954 8689 2.172717 GGGTTTATTAGGCCTCTCAGCA 59.827 50.000 9.68 0.00 0.00 4.41
3955 8690 2.807108 CGGGTTTATTAGGCCTCTCAGC 60.807 54.545 9.68 0.00 0.00 4.26
3956 8691 2.224305 CCGGGTTTATTAGGCCTCTCAG 60.224 54.545 9.68 0.00 0.00 3.35
3957 8692 1.766496 CCGGGTTTATTAGGCCTCTCA 59.234 52.381 9.68 0.00 0.00 3.27
3958 8693 2.044758 TCCGGGTTTATTAGGCCTCTC 58.955 52.381 9.68 0.00 0.00 3.20
3959 8694 1.767088 GTCCGGGTTTATTAGGCCTCT 59.233 52.381 9.68 0.00 0.00 3.69
3960 8695 1.539712 CGTCCGGGTTTATTAGGCCTC 60.540 57.143 9.68 0.00 0.00 4.70
3961 8696 0.466963 CGTCCGGGTTTATTAGGCCT 59.533 55.000 11.78 11.78 0.00 5.19
3962 8697 0.533531 CCGTCCGGGTTTATTAGGCC 60.534 60.000 0.00 0.00 0.00 5.19
3963 8698 0.465287 TCCGTCCGGGTTTATTAGGC 59.535 55.000 0.00 0.00 37.00 3.93
3964 8699 1.069668 CCTCCGTCCGGGTTTATTAGG 59.930 57.143 0.00 0.00 37.00 2.69
3965 8700 1.069668 CCCTCCGTCCGGGTTTATTAG 59.930 57.143 0.00 0.00 36.91 1.73
3966 8701 1.122227 CCCTCCGTCCGGGTTTATTA 58.878 55.000 0.00 0.00 36.91 0.98
3967 8702 0.618393 TCCCTCCGTCCGGGTTTATT 60.618 55.000 0.00 0.00 42.56 1.40
3968 8703 1.002017 TCCCTCCGTCCGGGTTTAT 59.998 57.895 0.00 0.00 42.56 1.40
3969 8704 1.683365 CTCCCTCCGTCCGGGTTTA 60.683 63.158 0.00 0.00 42.56 2.01
3970 8705 2.445492 TACTCCCTCCGTCCGGGTTT 62.445 60.000 0.00 0.00 42.56 3.27
3971 8706 2.234246 ATACTCCCTCCGTCCGGGTT 62.234 60.000 0.00 0.00 42.56 4.11
3972 8707 2.698075 ATACTCCCTCCGTCCGGGT 61.698 63.158 0.00 0.00 42.56 5.28
3973 8708 2.197875 ATACTCCCTCCGTCCGGG 59.802 66.667 0.00 0.00 43.38 5.73
3974 8709 1.041447 AACATACTCCCTCCGTCCGG 61.041 60.000 0.00 0.00 0.00 5.14
3975 8710 0.384669 GAACATACTCCCTCCGTCCG 59.615 60.000 0.00 0.00 0.00 4.79
3976 8711 1.409427 CTGAACATACTCCCTCCGTCC 59.591 57.143 0.00 0.00 0.00 4.79
3977 8712 2.100989 ACTGAACATACTCCCTCCGTC 58.899 52.381 0.00 0.00 0.00 4.79
3978 8713 2.233305 ACTGAACATACTCCCTCCGT 57.767 50.000 0.00 0.00 0.00 4.69
3979 8714 2.233922 ACAACTGAACATACTCCCTCCG 59.766 50.000 0.00 0.00 0.00 4.63
3980 8715 3.600388 CACAACTGAACATACTCCCTCC 58.400 50.000 0.00 0.00 0.00 4.30
3981 8716 3.003480 GCACAACTGAACATACTCCCTC 58.997 50.000 0.00 0.00 0.00 4.30
3982 8717 2.371841 TGCACAACTGAACATACTCCCT 59.628 45.455 0.00 0.00 0.00 4.20
3983 8718 2.778299 TGCACAACTGAACATACTCCC 58.222 47.619 0.00 0.00 0.00 4.30
3984 8719 4.002982 TGATGCACAACTGAACATACTCC 58.997 43.478 0.00 0.00 0.00 3.85
3985 8720 5.611796 TTGATGCACAACTGAACATACTC 57.388 39.130 0.00 0.00 33.18 2.59
4106 8842 3.873952 GGCAGCACAACAATTTTACCAAA 59.126 39.130 0.00 0.00 0.00 3.28
4156 8892 0.884704 CCTTGCTTGTACACCGCTGT 60.885 55.000 15.11 0.00 0.00 4.40
4159 8895 0.882927 TCACCTTGCTTGTACACCGC 60.883 55.000 8.92 8.92 0.00 5.68
4165 8901 1.675714 CCGCATCTCACCTTGCTTGTA 60.676 52.381 0.00 0.00 36.71 2.41
4166 8902 0.957395 CCGCATCTCACCTTGCTTGT 60.957 55.000 0.00 0.00 36.71 3.16
4189 8925 6.771188 TCGAGTTTCTTCTTTTTCTAGCTG 57.229 37.500 0.00 0.00 0.00 4.24
4213 10537 6.158598 CCATTGTTGATTCATCCGTTTTCTT 58.841 36.000 0.00 0.00 0.00 2.52
4214 10538 5.713025 CCATTGTTGATTCATCCGTTTTCT 58.287 37.500 0.00 0.00 0.00 2.52
4241 10565 1.156736 CGGAATCAAGGTGAAACGCT 58.843 50.000 0.00 0.00 38.12 5.07
4277 10608 2.554272 CTCCGTTTTGCCCGTTCG 59.446 61.111 0.00 0.00 0.00 3.95
4298 10629 0.618458 TGTGTACATCCCTTGCCCTC 59.382 55.000 0.00 0.00 0.00 4.30
4299 10630 1.072266 TTGTGTACATCCCTTGCCCT 58.928 50.000 0.00 0.00 0.00 5.19
4300 10631 1.173913 GTTGTGTACATCCCTTGCCC 58.826 55.000 0.00 0.00 0.00 5.36
4301 10632 0.802494 CGTTGTGTACATCCCTTGCC 59.198 55.000 0.00 0.00 0.00 4.52
4302 10633 0.802494 CCGTTGTGTACATCCCTTGC 59.198 55.000 0.00 0.00 0.00 4.01
4303 10634 2.289444 ACTCCGTTGTGTACATCCCTTG 60.289 50.000 0.00 0.00 0.00 3.61
4304 10635 1.975680 ACTCCGTTGTGTACATCCCTT 59.024 47.619 0.00 0.00 0.00 3.95
4305 10636 1.275291 CACTCCGTTGTGTACATCCCT 59.725 52.381 0.00 0.00 33.61 4.20
4306 10637 1.674817 CCACTCCGTTGTGTACATCCC 60.675 57.143 0.00 0.00 36.30 3.85
4307 10638 1.722011 CCACTCCGTTGTGTACATCC 58.278 55.000 0.00 0.00 36.30 3.51
4308 10639 1.076332 GCCACTCCGTTGTGTACATC 58.924 55.000 0.00 0.00 36.30 3.06
4309 10640 0.394938 TGCCACTCCGTTGTGTACAT 59.605 50.000 0.00 0.00 36.30 2.29
4311 10642 0.949105 CCTGCCACTCCGTTGTGTAC 60.949 60.000 4.70 0.00 36.30 2.90
4312 10643 1.369692 CCTGCCACTCCGTTGTGTA 59.630 57.895 4.70 0.00 36.30 2.90
4313 10644 2.111043 CCTGCCACTCCGTTGTGT 59.889 61.111 4.70 0.00 36.30 3.72
4314 10645 2.669569 CCCTGCCACTCCGTTGTG 60.670 66.667 0.00 0.00 37.66 3.33
4315 10646 4.643387 GCCCTGCCACTCCGTTGT 62.643 66.667 0.00 0.00 0.00 3.32
4349 10680 3.793144 CTTTGTCAGCGCGCCTCC 61.793 66.667 30.33 16.14 0.00 4.30
4350 10681 2.103042 ATCTTTGTCAGCGCGCCTC 61.103 57.895 30.33 18.65 0.00 4.70
4351 10682 2.046892 ATCTTTGTCAGCGCGCCT 60.047 55.556 30.33 12.83 0.00 5.52
4353 10684 2.575262 GCATCTTTGTCAGCGCGC 60.575 61.111 26.66 26.66 0.00 6.86
4356 10687 4.759564 GCTGCATCTTTGTCAGCG 57.240 55.556 0.00 0.00 40.53 5.18
4357 10688 1.136147 CCGCTGCATCTTTGTCAGC 59.864 57.895 0.00 3.59 43.49 4.26
4358 10689 1.136147 GCCGCTGCATCTTTGTCAG 59.864 57.895 0.00 0.00 37.47 3.51
4360 10691 1.660560 ATGGCCGCTGCATCTTTGTC 61.661 55.000 1.55 0.00 40.13 3.18
4361 10692 1.679977 ATGGCCGCTGCATCTTTGT 60.680 52.632 1.55 0.00 40.13 2.83
4362 10693 1.226859 CATGGCCGCTGCATCTTTG 60.227 57.895 1.55 0.00 40.13 2.77
4363 10694 3.072486 GCATGGCCGCTGCATCTTT 62.072 57.895 21.64 0.00 39.46 2.52
4364 10695 3.524606 GCATGGCCGCTGCATCTT 61.525 61.111 21.64 0.00 39.46 2.40
4376 10707 4.193334 TCTCTCGCGTCCGCATGG 62.193 66.667 12.58 1.25 42.06 3.66
4378 10709 2.824489 TCTCTCTCGCGTCCGCAT 60.824 61.111 12.58 0.00 42.06 4.73
4379 10710 3.500642 CTCTCTCTCGCGTCCGCA 61.501 66.667 12.58 0.00 42.06 5.69
4380 10711 4.897856 GCTCTCTCTCGCGTCCGC 62.898 72.222 5.77 0.68 37.85 5.54
4381 10712 4.244802 GGCTCTCTCTCGCGTCCG 62.245 72.222 5.77 0.00 0.00 4.79
4382 10713 4.244802 CGGCTCTCTCTCGCGTCC 62.245 72.222 5.77 0.00 0.00 4.79
4383 10714 4.897856 GCGGCTCTCTCTCGCGTC 62.898 72.222 5.77 0.00 40.06 5.19
4387 10718 1.653094 AACTCTGCGGCTCTCTCTCG 61.653 60.000 0.00 0.00 0.00 4.04
4390 10721 2.094442 AGTAAAACTCTGCGGCTCTCTC 60.094 50.000 0.00 0.00 0.00 3.20
4391 10722 1.896465 AGTAAAACTCTGCGGCTCTCT 59.104 47.619 0.00 0.00 0.00 3.10
4393 10724 2.037251 TCAAGTAAAACTCTGCGGCTCT 59.963 45.455 0.00 0.00 0.00 4.09
4395 10726 2.143925 GTCAAGTAAAACTCTGCGGCT 58.856 47.619 0.00 0.00 0.00 5.52
4396 10727 1.197036 GGTCAAGTAAAACTCTGCGGC 59.803 52.381 0.00 0.00 0.00 6.53
4398 10729 1.136336 GCGGTCAAGTAAAACTCTGCG 60.136 52.381 0.00 0.00 0.00 5.18
4399 10730 1.136336 CGCGGTCAAGTAAAACTCTGC 60.136 52.381 0.00 0.00 0.00 4.26
4400 10731 2.132762 ACGCGGTCAAGTAAAACTCTG 58.867 47.619 12.47 0.00 0.00 3.35
4401 10732 2.521105 ACGCGGTCAAGTAAAACTCT 57.479 45.000 12.47 0.00 0.00 3.24
4402 10733 3.001365 CGATACGCGGTCAAGTAAAACTC 60.001 47.826 12.47 0.00 36.03 3.01
4403 10734 2.919229 CGATACGCGGTCAAGTAAAACT 59.081 45.455 12.47 0.00 36.03 2.66
4416 10747 1.850441 CTTTTACTCCACCGATACGCG 59.150 52.381 3.53 3.53 40.47 6.01
4417 10748 2.884827 ACTTTTACTCCACCGATACGC 58.115 47.619 0.00 0.00 0.00 4.42
4418 10749 4.498682 CCCTACTTTTACTCCACCGATACG 60.499 50.000 0.00 0.00 0.00 3.06
4419 10750 4.646492 TCCCTACTTTTACTCCACCGATAC 59.354 45.833 0.00 0.00 0.00 2.24
4420 10751 4.870636 TCCCTACTTTTACTCCACCGATA 58.129 43.478 0.00 0.00 0.00 2.92
4421 10752 3.716431 TCCCTACTTTTACTCCACCGAT 58.284 45.455 0.00 0.00 0.00 4.18
4423 10754 3.967332 TTCCCTACTTTTACTCCACCG 57.033 47.619 0.00 0.00 0.00 4.94
4424 10755 7.534723 AAAATTTCCCTACTTTTACTCCACC 57.465 36.000 0.00 0.00 0.00 4.61
4446 10777 7.933728 GTAAATTTTTACTCCGGCTCAAAAA 57.066 32.000 16.67 16.67 39.82 1.94
4460 10791 5.062058 CCGCGGTTAGTCGAGTAAATTTTTA 59.938 40.000 19.50 0.00 0.00 1.52
4461 10792 4.143052 CCGCGGTTAGTCGAGTAAATTTTT 60.143 41.667 19.50 0.00 0.00 1.94
4462 10793 3.368843 CCGCGGTTAGTCGAGTAAATTTT 59.631 43.478 19.50 0.00 0.00 1.82
4463 10794 2.925563 CCGCGGTTAGTCGAGTAAATTT 59.074 45.455 19.50 0.00 0.00 1.82
4464 10795 2.164219 TCCGCGGTTAGTCGAGTAAATT 59.836 45.455 27.15 0.00 0.00 1.82
4465 10796 1.745087 TCCGCGGTTAGTCGAGTAAAT 59.255 47.619 27.15 0.00 0.00 1.40
4466 10797 1.164411 TCCGCGGTTAGTCGAGTAAA 58.836 50.000 27.15 0.00 0.00 2.01
4467 10798 1.382522 ATCCGCGGTTAGTCGAGTAA 58.617 50.000 27.15 8.66 0.00 2.24
4469 10800 0.942962 CTATCCGCGGTTAGTCGAGT 59.057 55.000 27.81 0.00 0.00 4.18
4470 10801 0.237761 CCTATCCGCGGTTAGTCGAG 59.762 60.000 31.36 18.18 0.00 4.04
4473 10804 0.825010 TCCCCTATCCGCGGTTAGTC 60.825 60.000 31.36 0.00 0.00 2.59
4475 10806 0.531200 GATCCCCTATCCGCGGTTAG 59.469 60.000 28.76 28.76 0.00 2.34
4476 10807 1.246056 CGATCCCCTATCCGCGGTTA 61.246 60.000 27.15 20.42 0.00 2.85
4479 10810 3.760035 CCGATCCCCTATCCGCGG 61.760 72.222 22.12 22.12 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.