Multiple sequence alignment - TraesCS5A01G420600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G420600 chr5A 100.000 7652 0 0 1 7652 606959831 606967482 0.000000e+00 14131.0
1 TraesCS5A01G420600 chr5A 83.934 305 38 6 5644 5944 691405740 691405443 1.630000e-71 281.0
2 TraesCS5A01G420600 chr5D 95.053 3275 97 23 1971 5199 486446009 486449264 0.000000e+00 5090.0
3 TraesCS5A01G420600 chr5D 86.739 1840 109 57 1 1778 486443486 486445252 0.000000e+00 1921.0
4 TraesCS5A01G420600 chr5D 84.594 1084 101 37 5935 6969 486449854 486450920 0.000000e+00 1016.0
5 TraesCS5A01G420600 chr5D 83.980 980 104 32 4684 5631 486919344 486918386 0.000000e+00 891.0
6 TraesCS5A01G420600 chr5D 89.011 455 27 10 5205 5647 486449420 486449863 6.750000e-150 542.0
7 TraesCS5A01G420600 chr5D 84.008 519 51 18 1444 1941 486445504 486446011 3.230000e-128 470.0
8 TraesCS5A01G420600 chr5D 85.934 391 31 11 7263 7652 486451592 486451959 5.560000e-106 396.0
9 TraesCS5A01G420600 chr5D 88.746 311 22 8 5644 5946 253937343 253937038 1.210000e-97 368.0
10 TraesCS5A01G420600 chr5D 89.046 283 15 9 6990 7266 486450999 486451271 3.420000e-88 337.0
11 TraesCS5A01G420600 chr5B 87.936 1923 137 39 2496 4352 597862702 597864595 0.000000e+00 2178.0
12 TraesCS5A01G420600 chr5B 89.710 1312 73 20 4833 6128 597865070 597866335 0.000000e+00 1618.0
13 TraesCS5A01G420600 chr5B 93.669 774 38 3 1 764 597854809 597855581 0.000000e+00 1147.0
14 TraesCS5A01G420600 chr5B 85.852 1039 81 26 811 1834 597859194 597860181 0.000000e+00 1044.0
15 TraesCS5A01G420600 chr5B 89.320 515 26 9 6164 6651 597866332 597866844 3.030000e-173 619.0
16 TraesCS5A01G420600 chr5B 94.302 351 14 1 4450 4800 597864723 597865067 4.070000e-147 532.0
17 TraesCS5A01G420600 chr5B 84.926 471 44 12 1839 2289 597860313 597860776 1.170000e-122 451.0
18 TraesCS5A01G420600 chr5B 90.351 342 13 9 7320 7650 597867824 597868156 1.530000e-116 431.0
19 TraesCS5A01G420600 chr5B 88.710 310 14 10 6677 6973 597866838 597867139 7.300000e-95 359.0
20 TraesCS5A01G420600 chr5B 91.304 138 12 0 7124 7261 597867331 597867468 1.010000e-43 189.0
21 TraesCS5A01G420600 chr5B 84.247 146 15 5 1096 1233 676300584 676300729 1.340000e-27 135.0
22 TraesCS5A01G420600 chr3B 89.803 304 23 3 5642 5941 370151929 370152228 4.330000e-102 383.0
23 TraesCS5A01G420600 chr3B 88.793 116 7 3 1096 1205 710462652 710462767 3.720000e-28 137.0
24 TraesCS5A01G420600 chr1D 86.817 311 27 8 5644 5946 241164708 241164404 1.230000e-87 335.0
25 TraesCS5A01G420600 chr1D 85.852 311 29 8 5644 5946 136785556 136785253 4.460000e-82 316.0
26 TraesCS5A01G420600 chr1D 84.940 166 16 7 2659 2818 141346515 141346677 7.950000e-35 159.0
27 TraesCS5A01G420600 chr2D 87.324 284 28 5 5644 5923 155776104 155775825 1.240000e-82 318.0
28 TraesCS5A01G420600 chr2A 84.818 303 39 5 5646 5946 105492354 105492057 1.610000e-76 298.0
29 TraesCS5A01G420600 chr7D 84.667 300 38 5 5647 5942 126931202 126930907 7.510000e-75 292.0
30 TraesCS5A01G420600 chr6D 85.542 166 15 7 2659 2818 430480108 430479946 1.710000e-36 165.0
31 TraesCS5A01G420600 chr1B 85.542 166 15 7 2659 2818 583538414 583538576 1.710000e-36 165.0
32 TraesCS5A01G420600 chr1B 82.192 146 18 5 1096 1233 41211246 41211391 1.350000e-22 119.0
33 TraesCS5A01G420600 chrUn 84.940 166 16 7 2659 2818 40084217 40084055 7.950000e-35 159.0
34 TraesCS5A01G420600 chrUn 84.940 166 16 7 2659 2818 223708579 223708741 7.950000e-35 159.0
35 TraesCS5A01G420600 chrUn 84.940 166 16 7 2659 2818 266189726 266189888 7.950000e-35 159.0
36 TraesCS5A01G420600 chr4D 84.940 166 16 7 2659 2818 135037606 135037768 7.950000e-35 159.0
37 TraesCS5A01G420600 chr2B 86.301 146 12 5 1096 1233 764724312 764724457 1.330000e-32 152.0
38 TraesCS5A01G420600 chr2B 84.138 145 16 4 1096 1233 40808252 40808108 4.820000e-27 134.0
39 TraesCS5A01G420600 chr4A 85.235 149 11 4 1084 1231 133946862 133946724 8.000000e-30 143.0
40 TraesCS5A01G420600 chr4A 97.297 37 1 0 5941 5977 570976694 570976730 6.410000e-06 63.9
41 TraesCS5A01G420600 chr7B 84.828 145 15 5 1096 1233 689375504 689375648 1.040000e-28 139.0
42 TraesCS5A01G420600 chr7B 83.673 147 14 5 1096 1233 604533732 604533877 6.230000e-26 130.0
43 TraesCS5A01G420600 chr4B 88.889 117 6 4 1096 1205 402224044 402224160 3.720000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G420600 chr5A 606959831 606967482 7651 False 14131.0 14131 100.000000 1 7652 1 chr5A.!!$F1 7651
1 TraesCS5A01G420600 chr5D 486443486 486451959 8473 False 1396.0 5090 87.769286 1 7652 7 chr5D.!!$F1 7651
2 TraesCS5A01G420600 chr5D 486918386 486919344 958 True 891.0 891 83.980000 4684 5631 1 chr5D.!!$R2 947
3 TraesCS5A01G420600 chr5B 597854809 597868156 13347 False 856.8 2178 89.608000 1 7650 10 chr5B.!!$F2 7649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 222 0.690744 TGATCAAGCCCTCCCGATGA 60.691 55.000 0.00 0.00 0.00 2.92 F
1303 4937 0.114560 AAGACGGAGGTGGAGGAGAA 59.885 55.000 0.00 0.00 0.00 2.87 F
1757 6010 0.038166 TGGGCTCAATTCCACTGGAC 59.962 55.000 0.00 0.00 0.00 4.02 F
1978 6358 0.827925 AAGCTCTCACTGGTCGTCCA 60.828 55.000 0.39 0.39 42.05 4.02 F
2727 8864 2.157863 GGCCGAAAGAAGAAAAGACTCG 59.842 50.000 0.00 0.00 0.00 4.18 F
2735 8872 2.990066 AGAAAAGACTCGGGCCATAG 57.010 50.000 4.39 3.05 0.00 2.23 F
2883 9020 4.081322 TGTGGAAGTCTTTACCAGTTCC 57.919 45.455 0.00 0.07 41.94 3.62 F
3495 9638 4.215109 ACCTTGGTGAAAACTAGCACATT 58.785 39.130 0.00 0.00 36.76 2.71 F
4742 11002 1.539827 GCTTTGGTGTAAATGCTCGGT 59.460 47.619 0.00 0.00 0.00 4.69 F
6000 12449 1.282875 GCAGCGCCTTCGAGTTTTT 59.717 52.632 2.29 0.00 38.10 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1668 5921 0.101040 CACATAAGCCAACATGCGGG 59.899 55.000 4.06 1.55 36.02 6.13 R
3126 9268 1.281287 AGCCTGCAGAGAACATGACAT 59.719 47.619 17.39 0.00 0.00 3.06 R
3495 9638 0.179004 TTTCCCTGCAAGCCTTCGAA 60.179 50.000 0.00 0.00 0.00 3.71 R
3745 9892 3.492313 GATGAAGGAAATGCGACACAAC 58.508 45.455 0.00 0.00 0.00 3.32 R
4176 10377 2.039348 TGACAAAGGGGTAGCCAAGTAC 59.961 50.000 14.06 0.00 0.00 2.73 R
4360 10564 4.432712 ACAACCAATGCTGAACAACTTTC 58.567 39.130 0.00 0.00 0.00 2.62 R
4740 11000 2.582052 TGAACAGGTGGATGTTTGACC 58.418 47.619 0.00 0.00 43.32 4.02 R
5394 11840 1.279496 TCCTCAGTTCTGGGACATGG 58.721 55.000 0.77 0.00 38.20 3.66 R
6142 12592 0.109319 CACCAGCCGTGCCATTAAAC 60.109 55.000 0.00 0.00 35.18 2.01 R
7002 13640 0.318441 CTTCTGCACCACGGAGAGAA 59.682 55.000 0.00 0.00 43.74 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 1.082117 CGGACACAATCCTGTACGCC 61.082 60.000 0.00 0.00 46.69 5.68
110 111 1.910580 AATCCGGCTTCCATCCACGT 61.911 55.000 0.00 0.00 0.00 4.49
152 153 1.607509 CGCCAAGCATCCTCTATCCTG 60.608 57.143 0.00 0.00 0.00 3.86
221 222 0.690744 TGATCAAGCCCTCCCGATGA 60.691 55.000 0.00 0.00 0.00 2.92
232 233 3.195002 CCGATGATGCACCGCGTT 61.195 61.111 4.92 0.00 0.00 4.84
284 285 3.114616 CTGCCCACACTCTTCGCG 61.115 66.667 0.00 0.00 0.00 5.87
784 794 4.530857 CGGGTGCCTCACGGATCC 62.531 72.222 0.00 0.00 39.57 3.36
792 802 2.026729 TGCCTCACGGATCCACATTAAA 60.027 45.455 13.41 0.00 0.00 1.52
797 807 2.350498 CACGGATCCACATTAAACGACC 59.650 50.000 13.41 0.00 0.00 4.79
815 825 2.579207 CCGAAGGCGTAGAATGAAGA 57.421 50.000 0.00 0.00 46.14 2.87
827 837 6.521133 GCGTAGAATGAAGAACACTTTCATTG 59.479 38.462 15.52 5.18 33.72 2.82
828 838 7.576236 CGTAGAATGAAGAACACTTTCATTGT 58.424 34.615 15.52 14.07 33.72 2.71
829 839 8.070171 CGTAGAATGAAGAACACTTTCATTGTT 58.930 33.333 15.52 8.10 39.94 2.83
858 4457 5.177511 GGCGTAATTTAGGAATACGTAACCC 59.822 44.000 15.41 11.97 36.63 4.11
954 4553 1.203364 AGAGCTTCTTCTTCCTCCCCA 60.203 52.381 0.00 0.00 0.00 4.96
958 4557 2.545810 CTTCTTCTTCCTCCCCACTCT 58.454 52.381 0.00 0.00 0.00 3.24
1234 4858 1.946650 GCTCGAGATTTCGCGGGAG 60.947 63.158 18.75 3.35 46.28 4.30
1277 4911 2.300967 TGGTCAGGTGATGCCCTCC 61.301 63.158 0.00 0.00 38.26 4.30
1303 4937 0.114560 AAGACGGAGGTGGAGGAGAA 59.885 55.000 0.00 0.00 0.00 2.87
1469 5103 0.324738 AGATCCTCTTCACCGAGCCA 60.325 55.000 0.00 0.00 0.00 4.75
1489 5123 2.281761 CTTCACGCCCAAGGTGCT 60.282 61.111 0.00 0.00 36.54 4.40
1493 5127 0.901114 TCACGCCCAAGGTGCTACTA 60.901 55.000 0.00 0.00 36.54 1.82
1495 5129 0.903454 ACGCCCAAGGTGCTACTACT 60.903 55.000 0.00 0.00 36.54 2.57
1496 5130 0.460284 CGCCCAAGGTGCTACTACTG 60.460 60.000 0.00 0.00 0.00 2.74
1497 5131 0.744771 GCCCAAGGTGCTACTACTGC 60.745 60.000 0.00 0.00 0.00 4.40
1498 5132 0.613260 CCCAAGGTGCTACTACTGCA 59.387 55.000 0.00 0.00 38.19 4.41
1504 5138 3.691820 TGCTACTACTGCACTCCCT 57.308 52.632 0.00 0.00 35.31 4.20
1505 5139 1.186200 TGCTACTACTGCACTCCCTG 58.814 55.000 0.00 0.00 35.31 4.45
1532 5166 4.134563 ACTTCAGGCTCGTTTAAATGTGT 58.865 39.130 7.28 0.00 0.00 3.72
1534 5168 4.742438 TCAGGCTCGTTTAAATGTGTTC 57.258 40.909 7.28 3.04 0.00 3.18
1554 5188 3.259064 TCGTGCCTAATAGACTTGTTGC 58.741 45.455 0.00 0.00 0.00 4.17
1561 5195 8.026607 GTGCCTAATAGACTTGTTGCAATTTAA 58.973 33.333 0.59 0.00 0.00 1.52
1562 5196 8.026607 TGCCTAATAGACTTGTTGCAATTTAAC 58.973 33.333 0.59 0.00 0.00 2.01
1569 5203 8.574196 AGACTTGTTGCAATTTAACACAATAC 57.426 30.769 0.59 0.00 37.73 1.89
1572 5206 7.437862 ACTTGTTGCAATTTAACACAATACTGG 59.562 33.333 0.59 0.00 37.73 4.00
1574 5208 6.920758 TGTTGCAATTTAACACAATACTGGAC 59.079 34.615 0.59 0.00 33.43 4.02
1577 5211 6.092748 GCAATTTAACACAATACTGGACCAG 58.907 40.000 20.45 20.45 37.52 4.00
1578 5212 6.620678 CAATTTAACACAATACTGGACCAGG 58.379 40.000 25.34 9.99 35.51 4.45
1579 5213 4.986054 TTAACACAATACTGGACCAGGT 57.014 40.909 25.34 10.65 35.51 4.00
1594 5228 4.212716 GACCAGGTAAAAGTTCAGGGTTT 58.787 43.478 0.00 0.00 0.00 3.27
1596 5230 3.243737 CCAGGTAAAAGTTCAGGGTTTGC 60.244 47.826 0.00 0.00 0.00 3.68
1598 5232 4.825085 CAGGTAAAAGTTCAGGGTTTGCTA 59.175 41.667 0.00 0.00 0.00 3.49
1603 5237 5.622770 AAAGTTCAGGGTTTGCTATTACG 57.377 39.130 0.00 0.00 0.00 3.18
1654 5907 2.556622 GTTATGTGGTCTTGGGTGTTGG 59.443 50.000 0.00 0.00 0.00 3.77
1696 5949 1.378531 TGGCTTATGTGATTCCGCAC 58.621 50.000 0.00 0.00 39.22 5.34
1724 5977 4.884164 ACCAGCCTAAAATGACATTAGCTC 59.116 41.667 0.00 0.00 0.00 4.09
1751 6004 0.703488 TGTGGATGGGCTCAATTCCA 59.297 50.000 4.71 4.71 35.93 3.53
1757 6010 0.038166 TGGGCTCAATTCCACTGGAC 59.962 55.000 0.00 0.00 0.00 4.02
1806 6059 6.591834 CCAAACAAAACAGTCCACATTTAACA 59.408 34.615 0.00 0.00 0.00 2.41
1880 6260 4.992688 TCAAGTGGTTTCACATGTGTTTC 58.007 39.130 24.63 14.97 45.91 2.78
1881 6261 4.704540 TCAAGTGGTTTCACATGTGTTTCT 59.295 37.500 24.63 12.62 45.91 2.52
1900 6280 4.796495 GACCACGTGGATGCCCCC 62.796 72.222 40.21 15.23 38.94 5.40
1927 6307 6.698008 TCAAACACTTCAGTTCATGTTGAT 57.302 33.333 0.00 0.00 35.51 2.57
1974 6354 2.926200 CACATTAAGCTCTCACTGGTCG 59.074 50.000 0.00 0.00 0.00 4.79
1978 6358 0.827925 AAGCTCTCACTGGTCGTCCA 60.828 55.000 0.39 0.39 42.05 4.02
2000 6380 5.337009 CCAATGCCATAATTCTCCTTATGCC 60.337 44.000 0.00 0.00 37.64 4.40
2011 6391 4.411927 TCTCCTTATGCCATCTCTCTACC 58.588 47.826 0.00 0.00 0.00 3.18
2114 6506 5.299531 GGGCATGGTTAGTTTTCTCTTATCC 59.700 44.000 0.00 0.00 0.00 2.59
2119 6511 7.707624 TGGTTAGTTTTCTCTTATCCGAGTA 57.292 36.000 0.00 0.00 32.83 2.59
2248 6646 8.253113 ACATAATTCTAGCTTTGGGTTTTGATG 58.747 33.333 0.00 0.00 0.00 3.07
2350 7650 6.002082 AGTTCAGTAAAGTTACCCATGGAAC 58.998 40.000 15.22 10.94 34.19 3.62
2365 7665 4.697352 CCATGGAACCTGAGTCTTTAACAG 59.303 45.833 5.56 0.00 0.00 3.16
2395 7695 6.294010 GCCAAGAAACTAAGAAAAGGGTAGTG 60.294 42.308 0.00 0.00 0.00 2.74
2583 8720 3.375699 CCCAGTAGTCTTCCTGGTACAT 58.624 50.000 14.12 0.00 45.61 2.29
2727 8864 2.157863 GGCCGAAAGAAGAAAAGACTCG 59.842 50.000 0.00 0.00 0.00 4.18
2735 8872 2.990066 AGAAAAGACTCGGGCCATAG 57.010 50.000 4.39 3.05 0.00 2.23
2758 8895 6.034003 AGTAATACCTACCCCTTTTTCCTCA 58.966 40.000 0.00 0.00 0.00 3.86
2883 9020 4.081322 TGTGGAAGTCTTTACCAGTTCC 57.919 45.455 0.00 0.07 41.94 3.62
2890 9027 5.632034 AGTCTTTACCAGTTCCACTTCTT 57.368 39.130 0.00 0.00 0.00 2.52
2895 9032 8.529476 GTCTTTACCAGTTCCACTTCTTCTATA 58.471 37.037 0.00 0.00 0.00 1.31
2929 9071 6.677913 TGCTCTCAAATGGTTAGTAAAAAGC 58.322 36.000 0.00 0.00 0.00 3.51
3074 9216 9.791801 TTATCCATATTTTAGTGCAGCTAATCA 57.208 29.630 8.82 2.18 39.23 2.57
3078 9220 9.188588 CCATATTTTAGTGCAGCTAATCAATTG 57.811 33.333 0.00 0.00 39.23 2.32
3126 9268 8.359875 TGCATTTGGTTCTAATTCTCCAATTA 57.640 30.769 0.00 0.00 39.27 1.40
3370 9513 4.941263 TGGCCTTTGTGTAATGTCTGTATC 59.059 41.667 3.32 0.00 0.00 2.24
3386 9529 8.902540 TGTCTGTATCATATGGTATTTGTTCC 57.097 34.615 2.13 0.00 0.00 3.62
3427 9570 6.342111 TGTTTCCTTGGTTTGGTGATTTTAC 58.658 36.000 0.00 0.00 0.00 2.01
3495 9638 4.215109 ACCTTGGTGAAAACTAGCACATT 58.785 39.130 0.00 0.00 36.76 2.71
3745 9892 9.161629 TCTTCTGGTATGTGTAATTTGTACATG 57.838 33.333 0.00 0.00 36.52 3.21
3753 9900 6.423042 TGTGTAATTTGTACATGTTGTGTCG 58.577 36.000 2.30 0.00 42.29 4.35
4011 10198 4.218852 GGAATACTAGGAGTCTGAATCCGG 59.781 50.000 17.49 15.99 42.02 5.14
4097 10284 9.710979 TTCGCAACTGCTTTATATTTGTATTAC 57.289 29.630 0.00 0.00 39.32 1.89
4176 10377 7.906199 TTTGGATATGTTAATAAGTTGGGGG 57.094 36.000 0.00 0.00 0.00 5.40
4354 10558 9.656323 TGTACAGATATATTAAGACCAGTCCTT 57.344 33.333 0.00 0.00 0.00 3.36
4370 10578 6.542735 ACCAGTCCTTAAAGAGAAAGTTGTTC 59.457 38.462 0.00 0.00 0.00 3.18
4412 10620 6.373216 TGTGTGCTTACTAAATTACATGGGAC 59.627 38.462 0.00 0.00 0.00 4.46
4519 10779 6.054295 CGAAGAGATTTGAGATTGGAGGAAT 58.946 40.000 0.00 0.00 0.00 3.01
4740 11000 2.226437 ACTGCTTTGGTGTAAATGCTCG 59.774 45.455 0.00 0.00 0.00 5.03
4742 11002 1.539827 GCTTTGGTGTAAATGCTCGGT 59.460 47.619 0.00 0.00 0.00 4.69
4785 11047 8.920665 CATTTACATGTATAGAGAGCACTTAGC 58.079 37.037 6.36 0.00 46.19 3.09
5040 11306 1.937223 AGTGTTTCAAACGTCGCATCA 59.063 42.857 0.00 0.00 0.00 3.07
5145 11412 4.262420 GCAAGATGCCTTTTCCTTGGTTAA 60.262 41.667 0.00 0.00 37.42 2.01
5156 11423 3.839778 TCCTTGGTTAAAACTCTTGGGG 58.160 45.455 0.00 0.00 0.00 4.96
5161 11429 4.874199 TGGTTAAAACTCTTGGGGTTTCT 58.126 39.130 0.00 0.00 36.09 2.52
5320 11749 8.334263 TCTGCATGACACAATTATGAAAAGTA 57.666 30.769 0.00 0.00 0.00 2.24
5356 11798 4.558226 TGATTGTCTGAATGCTAGTGGT 57.442 40.909 0.00 0.00 0.00 4.16
5394 11840 5.638234 AGCAACGGTCTAGTTTGTTTCTATC 59.362 40.000 0.00 0.00 30.96 2.08
5543 11990 3.504906 TCTTGTACTCCTGTTAGTGTCCG 59.495 47.826 0.00 0.00 0.00 4.79
5646 12095 7.319646 TGCTGGTTATAGCCATTGTTTTTAAG 58.680 34.615 8.95 0.00 43.02 1.85
5653 12102 4.309933 AGCCATTGTTTTTAAGAGCAAGC 58.690 39.130 1.97 1.25 0.00 4.01
5798 12247 9.635520 AAATGCAATAAATGTGAAGAAAGAGAG 57.364 29.630 0.00 0.00 0.00 3.20
5802 12251 8.389603 GCAATAAATGTGAAGAAAGAGAGAGAG 58.610 37.037 0.00 0.00 0.00 3.20
5805 12254 9.874205 ATAAATGTGAAGAAAGAGAGAGAGAAG 57.126 33.333 0.00 0.00 0.00 2.85
5806 12255 5.720371 TGTGAAGAAAGAGAGAGAGAAGG 57.280 43.478 0.00 0.00 0.00 3.46
5807 12256 5.144100 TGTGAAGAAAGAGAGAGAGAAGGT 58.856 41.667 0.00 0.00 0.00 3.50
5809 12258 4.526262 TGAAGAAAGAGAGAGAGAAGGTGG 59.474 45.833 0.00 0.00 0.00 4.61
5810 12259 4.396357 AGAAAGAGAGAGAGAAGGTGGA 57.604 45.455 0.00 0.00 0.00 4.02
5811 12260 4.746466 AGAAAGAGAGAGAGAAGGTGGAA 58.254 43.478 0.00 0.00 0.00 3.53
5841 12290 9.657728 AAAATGTAGTACTCTTATAGCCTACCT 57.342 33.333 0.00 0.00 34.39 3.08
5842 12291 9.657728 AAATGTAGTACTCTTATAGCCTACCTT 57.342 33.333 0.00 0.00 34.39 3.50
5848 12297 8.838741 AGTACTCTTATAGCCTACCTTATAGCT 58.161 37.037 0.00 0.00 39.37 3.32
5875 12324 8.135382 ACCTTGTTGTATGAGTGACTATAAGT 57.865 34.615 0.00 0.00 0.00 2.24
5876 12325 8.035394 ACCTTGTTGTATGAGTGACTATAAGTG 58.965 37.037 0.00 0.00 0.00 3.16
5877 12326 8.251026 CCTTGTTGTATGAGTGACTATAAGTGA 58.749 37.037 0.00 0.00 0.00 3.41
5878 12327 9.809096 CTTGTTGTATGAGTGACTATAAGTGAT 57.191 33.333 0.00 0.00 0.00 3.06
5879 12328 9.586435 TTGTTGTATGAGTGACTATAAGTGATG 57.414 33.333 0.00 0.00 0.00 3.07
5880 12329 8.966868 TGTTGTATGAGTGACTATAAGTGATGA 58.033 33.333 0.00 0.00 0.00 2.92
5881 12330 9.239002 GTTGTATGAGTGACTATAAGTGATGAC 57.761 37.037 0.00 0.00 0.00 3.06
5882 12331 8.753497 TGTATGAGTGACTATAAGTGATGACT 57.247 34.615 0.00 0.00 0.00 3.41
5883 12332 9.847224 TGTATGAGTGACTATAAGTGATGACTA 57.153 33.333 0.00 0.00 0.00 2.59
5885 12334 8.753497 ATGAGTGACTATAAGTGATGACTACA 57.247 34.615 0.00 0.00 0.00 2.74
5899 12348 5.759763 TGATGACTACATATGACATGGCAAC 59.240 40.000 4.70 4.32 36.82 4.17
5934 12383 4.945246 ACAGTTGGCTATACTATGAACCG 58.055 43.478 0.00 0.00 0.00 4.44
6000 12449 1.282875 GCAGCGCCTTCGAGTTTTT 59.717 52.632 2.29 0.00 38.10 1.94
6048 12497 1.662044 GCTTCAAGGCAGTGGGTTG 59.338 57.895 0.00 0.00 0.00 3.77
6088 12537 4.632153 ACCGACATCAATAAGCAGGTATC 58.368 43.478 0.00 0.00 0.00 2.24
6108 12558 5.980698 ATCGTATTTCAGCAGTTCAGATG 57.019 39.130 0.00 0.00 0.00 2.90
6118 12568 6.279123 TCAGCAGTTCAGATGATCATTACTC 58.721 40.000 10.14 0.00 0.00 2.59
6133 12583 2.831685 TACTCGCAGGCTTCTTCAAA 57.168 45.000 0.00 0.00 0.00 2.69
6136 12586 1.603802 CTCGCAGGCTTCTTCAAACAA 59.396 47.619 0.00 0.00 0.00 2.83
6137 12587 1.603802 TCGCAGGCTTCTTCAAACAAG 59.396 47.619 0.00 0.00 0.00 3.16
6138 12588 1.775869 GCAGGCTTCTTCAAACAAGC 58.224 50.000 0.00 0.00 43.72 4.01
6139 12589 1.339291 GCAGGCTTCTTCAAACAAGCT 59.661 47.619 3.83 0.00 43.89 3.74
6140 12590 2.223900 GCAGGCTTCTTCAAACAAGCTT 60.224 45.455 0.00 0.00 43.89 3.74
6141 12591 3.636381 CAGGCTTCTTCAAACAAGCTTC 58.364 45.455 0.00 0.00 43.89 3.86
6142 12592 2.291741 AGGCTTCTTCAAACAAGCTTCG 59.708 45.455 0.00 0.00 43.89 3.79
6143 12593 2.033424 GGCTTCTTCAAACAAGCTTCGT 59.967 45.455 0.00 0.00 43.89 3.85
6144 12594 3.489229 GGCTTCTTCAAACAAGCTTCGTT 60.489 43.478 0.00 2.02 43.89 3.85
6145 12595 4.105486 GCTTCTTCAAACAAGCTTCGTTT 58.895 39.130 16.38 16.38 41.61 3.60
6146 12596 5.270853 GCTTCTTCAAACAAGCTTCGTTTA 58.729 37.500 19.63 9.91 41.61 2.01
6147 12597 5.741982 GCTTCTTCAAACAAGCTTCGTTTAA 59.258 36.000 19.63 12.87 41.61 1.52
6148 12598 6.417930 GCTTCTTCAAACAAGCTTCGTTTAAT 59.582 34.615 19.63 3.80 41.61 1.40
6149 12599 7.565789 GCTTCTTCAAACAAGCTTCGTTTAATG 60.566 37.037 19.63 12.64 41.61 1.90
6150 12600 6.205784 TCTTCAAACAAGCTTCGTTTAATGG 58.794 36.000 19.63 11.80 34.87 3.16
6151 12601 4.295051 TCAAACAAGCTTCGTTTAATGGC 58.705 39.130 19.63 0.00 34.87 4.40
6152 12602 4.047822 CAAACAAGCTTCGTTTAATGGCA 58.952 39.130 19.63 0.00 34.87 4.92
6153 12603 3.282831 ACAAGCTTCGTTTAATGGCAC 57.717 42.857 0.00 0.00 0.00 5.01
6154 12604 2.241722 CAAGCTTCGTTTAATGGCACG 58.758 47.619 0.00 0.00 37.77 5.34
6155 12605 0.802494 AGCTTCGTTTAATGGCACGG 59.198 50.000 0.00 0.00 37.02 4.94
6156 12606 0.796870 GCTTCGTTTAATGGCACGGC 60.797 55.000 0.00 0.00 37.02 5.68
6157 12607 0.802494 CTTCGTTTAATGGCACGGCT 59.198 50.000 0.00 0.00 37.02 5.52
6158 12608 0.519519 TTCGTTTAATGGCACGGCTG 59.480 50.000 0.00 0.00 37.02 4.85
6159 12609 1.136565 CGTTTAATGGCACGGCTGG 59.863 57.895 0.00 0.00 32.58 4.85
6160 12610 1.582610 CGTTTAATGGCACGGCTGGT 61.583 55.000 0.00 0.00 32.58 4.00
6213 12663 6.861572 CCTTGCTTATGCTCATGTTGATAATG 59.138 38.462 1.96 0.00 40.48 1.90
6217 12667 6.016860 GCTTATGCTCATGTTGATAATGACCA 60.017 38.462 0.00 0.00 36.03 4.02
6304 12788 1.134848 AGAGAAGCGAATCTGTCTGCC 60.135 52.381 0.00 0.00 0.00 4.85
6307 12791 0.107945 AAGCGAATCTGTCTGCCTCC 60.108 55.000 0.00 0.00 0.00 4.30
6337 12821 3.004419 GCCCAACTCTTGTGAAGGTAAAC 59.996 47.826 0.00 0.00 0.00 2.01
6349 12847 3.074836 TGAAGGTAAACCCCCTAAACTGG 59.925 47.826 0.00 0.00 36.42 4.00
6350 12848 2.722119 AGGTAAACCCCCTAAACTGGT 58.278 47.619 0.00 0.00 36.42 4.00
6363 12861 3.123620 CTGGTGCGCTCTTGCTCC 61.124 66.667 9.73 0.15 46.22 4.70
6376 12874 4.115199 GCTCCCGGCATTCCCAGT 62.115 66.667 0.00 0.00 41.35 4.00
6386 12884 2.025699 GGCATTCCCAGTTACTAACCCA 60.026 50.000 0.00 0.00 0.00 4.51
6527 13030 3.483959 GGCGACTACGACGAGACT 58.516 61.111 0.00 0.00 42.66 3.24
6603 13106 2.027385 CTCGAGTCACAGGATGGATGA 58.973 52.381 3.62 0.00 43.62 2.92
6612 13123 0.250234 AGGATGGATGACACACCGTG 59.750 55.000 0.00 0.00 39.75 4.94
6643 13154 4.563976 GTGTTGGCAACTGATAAATGATGC 59.436 41.667 28.71 0.00 37.61 3.91
6759 13270 1.197721 GCTTCTGGTTTGGATGTGTCG 59.802 52.381 0.00 0.00 0.00 4.35
6776 13287 1.154413 CGTTGTTGCTAGCTTGGCG 60.154 57.895 17.23 10.16 0.00 5.69
6818 13334 4.815269 AGCTATTCAGATTGCCGTCTATC 58.185 43.478 0.00 0.00 35.04 2.08
6819 13335 4.526262 AGCTATTCAGATTGCCGTCTATCT 59.474 41.667 0.00 0.00 35.64 1.98
6867 13403 1.997606 GTACCTGTGTCGTACCATTGC 59.002 52.381 0.00 0.00 31.72 3.56
6906 13449 1.063327 ATCGCGTTGCTCTCTCTCG 59.937 57.895 5.77 0.00 0.00 4.04
6952 13495 1.866496 CGTTCGACGAAGCCTACGG 60.866 63.158 11.25 0.00 46.05 4.02
6973 13516 4.377022 CGGAAATGTTACCAACGTTCTCTG 60.377 45.833 0.00 0.00 39.59 3.35
6974 13517 4.514066 GGAAATGTTACCAACGTTCTCTGT 59.486 41.667 0.00 0.00 39.59 3.41
6975 13518 5.418310 AAATGTTACCAACGTTCTCTGTG 57.582 39.130 0.00 0.00 39.59 3.66
6976 13519 3.530265 TGTTACCAACGTTCTCTGTGT 57.470 42.857 0.00 0.00 0.00 3.72
6981 13524 0.504384 CAACGTTCTCTGTGTCGCAG 59.496 55.000 7.09 7.09 46.34 5.18
6982 13525 0.102481 AACGTTCTCTGTGTCGCAGT 59.898 50.000 13.00 0.00 45.23 4.40
6983 13526 0.949397 ACGTTCTCTGTGTCGCAGTA 59.051 50.000 13.00 0.68 45.23 2.74
6984 13527 1.069159 ACGTTCTCTGTGTCGCAGTAG 60.069 52.381 13.00 9.28 45.23 2.57
6985 13528 1.069159 CGTTCTCTGTGTCGCAGTAGT 60.069 52.381 13.00 0.00 45.23 2.73
6986 13529 2.159037 CGTTCTCTGTGTCGCAGTAGTA 59.841 50.000 13.00 1.68 45.23 1.82
6988 13531 4.099120 GTTCTCTGTGTCGCAGTAGTATG 58.901 47.826 13.00 0.00 45.23 2.39
6991 13629 0.174845 TGTGTCGCAGTAGTATGGGC 59.825 55.000 0.00 0.00 33.41 5.36
7010 13648 1.445095 CCAGCCTCCATTCTCTCCG 59.555 63.158 0.00 0.00 0.00 4.63
7058 13700 0.379316 CGACGACCGATCCACATACA 59.621 55.000 0.00 0.00 41.76 2.29
7059 13701 1.836383 GACGACCGATCCACATACAC 58.164 55.000 0.00 0.00 0.00 2.90
7060 13702 1.133598 GACGACCGATCCACATACACA 59.866 52.381 0.00 0.00 0.00 3.72
7061 13703 1.134367 ACGACCGATCCACATACACAG 59.866 52.381 0.00 0.00 0.00 3.66
7062 13704 1.404035 CGACCGATCCACATACACAGA 59.596 52.381 0.00 0.00 0.00 3.41
7063 13705 2.034685 CGACCGATCCACATACACAGAT 59.965 50.000 0.00 0.00 0.00 2.90
7064 13706 3.252458 CGACCGATCCACATACACAGATA 59.748 47.826 0.00 0.00 0.00 1.98
7065 13707 4.547532 GACCGATCCACATACACAGATAC 58.452 47.826 0.00 0.00 0.00 2.24
7067 13709 4.202121 ACCGATCCACATACACAGATACAC 60.202 45.833 0.00 0.00 0.00 2.90
7069 13711 3.159353 TCCACATACACAGATACACGC 57.841 47.619 0.00 0.00 0.00 5.34
7070 13712 2.159156 TCCACATACACAGATACACGCC 60.159 50.000 0.00 0.00 0.00 5.68
7071 13713 1.852280 CACATACACAGATACACGCCG 59.148 52.381 0.00 0.00 0.00 6.46
7072 13714 1.475280 ACATACACAGATACACGCCGT 59.525 47.619 0.00 0.00 0.00 5.68
7073 13715 2.117137 CATACACAGATACACGCCGTC 58.883 52.381 0.00 0.00 0.00 4.79
7074 13716 0.452987 TACACAGATACACGCCGTCC 59.547 55.000 0.00 0.00 0.00 4.79
7076 13718 2.278596 CAGATACACGCCGTCCGG 60.279 66.667 0.24 0.24 42.52 5.14
7078 13720 2.278401 GATACACGCCGTCCGGTC 60.278 66.667 7.66 0.00 42.52 4.79
7079 13721 3.055080 GATACACGCCGTCCGGTCA 62.055 63.158 7.66 0.00 42.52 4.02
7080 13722 2.546645 GATACACGCCGTCCGGTCAA 62.547 60.000 7.66 0.00 42.52 3.18
7120 13762 4.466370 ACGAGTTCTGGTAGGAATTGATGA 59.534 41.667 0.00 0.00 0.00 2.92
7130 13772 7.602753 TGGTAGGAATTGATGATCTACATACG 58.397 38.462 0.00 0.00 39.56 3.06
7163 13805 2.911143 GGACATCCCGTGCCATCT 59.089 61.111 0.00 0.00 0.00 2.90
7168 13810 0.816825 CATCCCGTGCCATCTCCAAG 60.817 60.000 0.00 0.00 0.00 3.61
7186 13828 4.080526 TCCAAGCTCTAGTTAATGGTTCCC 60.081 45.833 0.00 0.00 0.00 3.97
7201 13843 3.957586 CCCACAGTGCCCTGCTCA 61.958 66.667 0.00 0.00 42.81 4.26
7286 14267 0.820871 AGCAGGATCTTGGTCGAGAC 59.179 55.000 3.33 0.00 0.00 3.36
7288 14269 1.095600 CAGGATCTTGGTCGAGACGA 58.904 55.000 0.00 0.00 0.00 4.20
7289 14270 1.064803 CAGGATCTTGGTCGAGACGAG 59.935 57.143 0.00 0.00 36.23 4.18
7290 14271 1.065345 AGGATCTTGGTCGAGACGAGA 60.065 52.381 8.91 8.91 36.23 4.04
7291 14272 1.332375 GGATCTTGGTCGAGACGAGAG 59.668 57.143 11.45 4.37 36.23 3.20
7292 14273 1.332375 GATCTTGGTCGAGACGAGAGG 59.668 57.143 11.45 0.00 36.23 3.69
7293 14274 0.677098 TCTTGGTCGAGACGAGAGGG 60.677 60.000 3.45 0.00 36.23 4.30
7294 14275 0.961358 CTTGGTCGAGACGAGAGGGT 60.961 60.000 0.00 0.00 36.23 4.34
7295 14276 0.538977 TTGGTCGAGACGAGAGGGTT 60.539 55.000 0.00 0.00 36.23 4.11
7296 14277 1.241990 TGGTCGAGACGAGAGGGTTG 61.242 60.000 0.00 0.00 36.23 3.77
7297 14278 1.153997 GTCGAGACGAGAGGGTTGC 60.154 63.158 0.00 0.00 36.23 4.17
7303 14286 3.777925 CGAGAGGGTTGCGTTGCG 61.778 66.667 0.00 0.00 0.00 4.85
7347 14343 1.135315 CGATCTGCGCCCAACAAAG 59.865 57.895 4.18 0.00 0.00 2.77
7407 14403 0.660488 TTGTATAATGCGCTTGCGGG 59.340 50.000 16.79 0.00 43.34 6.13
7425 14423 1.099295 GGTTATTAGGGCCCGTGTGC 61.099 60.000 18.44 6.44 0.00 4.57
7426 14424 1.153329 TTATTAGGGCCCGTGTGCG 60.153 57.895 18.44 0.00 37.95 5.34
7427 14425 1.901654 TTATTAGGGCCCGTGTGCGT 61.902 55.000 18.44 0.00 36.15 5.24
7428 14426 2.581208 TATTAGGGCCCGTGTGCGTG 62.581 60.000 18.44 0.00 36.15 5.34
7449 14447 1.526575 GGTGTGTGTGGCCAATGGAG 61.527 60.000 7.24 0.00 0.00 3.86
7623 14630 3.130633 GCCAGCATACATTACACGATGA 58.869 45.455 0.00 0.00 0.00 2.92
7624 14631 3.185188 GCCAGCATACATTACACGATGAG 59.815 47.826 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 1.134946 GGATGGAAGCCGGATTTTGTG 59.865 52.381 6.32 0.00 24.31 3.33
110 111 3.394606 GGGCTTTGGAGGATATGAGGTTA 59.605 47.826 0.00 0.00 0.00 2.85
221 222 3.049674 CTGGTGAACGCGGTGCAT 61.050 61.111 12.47 0.00 0.00 3.96
284 285 2.741211 GTCGGCTTCGGGGTGTTC 60.741 66.667 0.00 0.00 34.13 3.18
774 784 3.306166 GTCGTTTAATGTGGATCCGTGAG 59.694 47.826 7.39 0.00 0.00 3.51
775 785 3.255725 GTCGTTTAATGTGGATCCGTGA 58.744 45.455 7.39 0.00 0.00 4.35
776 786 2.350498 GGTCGTTTAATGTGGATCCGTG 59.650 50.000 7.39 0.00 0.00 4.94
777 787 2.624636 GGTCGTTTAATGTGGATCCGT 58.375 47.619 7.39 0.00 0.00 4.69
778 788 1.591158 CGGTCGTTTAATGTGGATCCG 59.409 52.381 7.39 0.00 0.00 4.18
779 789 2.896168 TCGGTCGTTTAATGTGGATCC 58.104 47.619 4.20 4.20 0.00 3.36
780 790 3.308866 CCTTCGGTCGTTTAATGTGGATC 59.691 47.826 0.00 0.00 0.00 3.36
781 791 3.267483 CCTTCGGTCGTTTAATGTGGAT 58.733 45.455 0.00 0.00 0.00 3.41
782 792 2.690786 CCTTCGGTCGTTTAATGTGGA 58.309 47.619 0.00 0.00 0.00 4.02
783 793 1.129811 GCCTTCGGTCGTTTAATGTGG 59.870 52.381 0.00 0.00 0.00 4.17
784 794 1.201877 CGCCTTCGGTCGTTTAATGTG 60.202 52.381 0.00 0.00 0.00 3.21
792 802 0.179145 CATTCTACGCCTTCGGTCGT 60.179 55.000 7.33 7.33 40.69 4.34
797 807 3.060895 GTGTTCTTCATTCTACGCCTTCG 59.939 47.826 0.00 0.00 42.43 3.79
827 837 6.074463 CGTATTCCTAAATTACGCCTCTGAAC 60.074 42.308 0.00 0.00 0.00 3.18
828 838 5.981315 CGTATTCCTAAATTACGCCTCTGAA 59.019 40.000 0.00 0.00 0.00 3.02
829 839 5.068198 ACGTATTCCTAAATTACGCCTCTGA 59.932 40.000 0.00 0.00 37.63 3.27
832 842 6.144563 GGTTACGTATTCCTAAATTACGCCTC 59.855 42.308 0.00 0.00 37.63 4.70
834 844 5.177511 GGGTTACGTATTCCTAAATTACGCC 59.822 44.000 14.19 0.00 37.63 5.68
835 845 5.107875 CGGGTTACGTATTCCTAAATTACGC 60.108 44.000 14.19 5.77 37.63 4.42
876 4475 1.835483 CGAGTGTGTGACTGGCAAGC 61.835 60.000 0.00 0.00 33.83 4.01
877 4476 2.229039 CGAGTGTGTGACTGGCAAG 58.771 57.895 0.00 0.00 33.83 4.01
881 4480 1.373497 GGAGCGAGTGTGTGACTGG 60.373 63.158 0.00 0.00 33.83 4.00
882 4481 1.730902 CGGAGCGAGTGTGTGACTG 60.731 63.158 0.00 0.00 33.83 3.51
883 4482 2.645567 CGGAGCGAGTGTGTGACT 59.354 61.111 0.00 0.00 37.76 3.41
916 4515 2.128853 CTCGCGGCAGAGGAGATCTC 62.129 65.000 14.75 14.75 42.75 2.75
945 4544 2.291043 GCGGAAGAGTGGGGAGGAA 61.291 63.158 0.00 0.00 0.00 3.36
947 4546 0.976073 TTAGCGGAAGAGTGGGGAGG 60.976 60.000 0.00 0.00 0.00 4.30
954 4553 2.467880 TGGAGGATTTAGCGGAAGAGT 58.532 47.619 0.00 0.00 0.00 3.24
958 4557 3.086282 GGTTTTGGAGGATTTAGCGGAA 58.914 45.455 0.00 0.00 0.00 4.30
1277 4911 1.550524 TCCACCTCCGTCTTCATCTTG 59.449 52.381 0.00 0.00 0.00 3.02
1325 4959 4.640690 ACCTCCTCCACCACCGCT 62.641 66.667 0.00 0.00 0.00 5.52
1469 5103 1.071471 CACCTTGGGCGTGAAGAGT 59.929 57.895 0.00 0.00 32.77 3.24
1497 5131 1.610102 CCTGAAGTCAAGCAGGGAGTG 60.610 57.143 0.00 0.00 46.24 3.51
1498 5132 0.689623 CCTGAAGTCAAGCAGGGAGT 59.310 55.000 0.00 0.00 46.24 3.85
1503 5137 0.320247 ACGAGCCTGAAGTCAAGCAG 60.320 55.000 4.79 1.27 35.83 4.24
1504 5138 0.106708 AACGAGCCTGAAGTCAAGCA 59.893 50.000 4.79 0.00 35.83 3.91
1505 5139 1.230324 AAACGAGCCTGAAGTCAAGC 58.770 50.000 0.00 0.00 33.65 4.01
1506 5140 5.049405 ACATTTAAACGAGCCTGAAGTCAAG 60.049 40.000 0.00 0.00 0.00 3.02
1507 5141 4.819630 ACATTTAAACGAGCCTGAAGTCAA 59.180 37.500 0.00 0.00 0.00 3.18
1508 5142 4.213270 CACATTTAAACGAGCCTGAAGTCA 59.787 41.667 0.00 0.00 0.00 3.41
1509 5143 4.213482 ACACATTTAAACGAGCCTGAAGTC 59.787 41.667 0.00 0.00 0.00 3.01
1532 5166 3.682858 GCAACAAGTCTATTAGGCACGAA 59.317 43.478 0.00 0.00 0.00 3.85
1534 5168 3.000041 TGCAACAAGTCTATTAGGCACG 59.000 45.455 0.00 0.00 0.00 5.34
1554 5188 6.208599 ACCTGGTCCAGTATTGTGTTAAATTG 59.791 38.462 17.85 0.00 0.00 2.32
1561 5195 4.986054 TTTACCTGGTCCAGTATTGTGT 57.014 40.909 17.85 9.45 0.00 3.72
1562 5196 5.313712 ACTTTTACCTGGTCCAGTATTGTG 58.686 41.667 17.85 3.69 0.00 3.33
1569 5203 3.412386 CCTGAACTTTTACCTGGTCCAG 58.588 50.000 12.40 12.40 0.00 3.86
1572 5206 3.503800 ACCCTGAACTTTTACCTGGTC 57.496 47.619 0.63 0.00 0.00 4.02
1574 5208 3.243737 GCAAACCCTGAACTTTTACCTGG 60.244 47.826 0.00 0.00 0.00 4.45
1577 5211 5.977489 ATAGCAAACCCTGAACTTTTACC 57.023 39.130 0.00 0.00 0.00 2.85
1578 5212 7.019418 CGTAATAGCAAACCCTGAACTTTTAC 58.981 38.462 0.00 0.00 0.00 2.01
1579 5213 6.711645 ACGTAATAGCAAACCCTGAACTTTTA 59.288 34.615 0.00 0.00 0.00 1.52
1594 5228 5.887598 TCCTGAAACCTAGTACGTAATAGCA 59.112 40.000 21.57 13.92 0.00 3.49
1603 5237 7.344134 ACCCAATTAATCCTGAAACCTAGTAC 58.656 38.462 0.00 0.00 0.00 2.73
1654 5907 1.284715 GCGGGTTAAGTTGGTGTGC 59.715 57.895 0.00 0.00 0.00 4.57
1668 5921 0.101040 CACATAAGCCAACATGCGGG 59.899 55.000 4.06 1.55 36.02 6.13
1696 5949 7.254932 GCTAATGTCATTTTAGGCTGGTAGAAG 60.255 40.741 2.79 0.00 0.00 2.85
1724 5977 1.821136 GAGCCCATCCACAAAAGGAAG 59.179 52.381 0.00 0.00 41.92 3.46
1786 6039 7.032580 TCAGTTGTTAAATGTGGACTGTTTTG 58.967 34.615 0.00 0.00 36.70 2.44
1806 6059 3.481453 GGACTTTTCCAAGAGCTCAGTT 58.519 45.455 17.77 0.00 42.30 3.16
1828 6081 8.400947 TGTAGCAGATGATTTTATTGAAGAAGC 58.599 33.333 0.00 0.00 0.00 3.86
1880 6260 2.040544 GGGCATCCACGTGGTCAAG 61.041 63.158 32.74 20.93 36.34 3.02
1881 6261 2.033448 GGGCATCCACGTGGTCAA 59.967 61.111 32.74 15.85 36.34 3.18
1900 6280 4.279169 ACATGAACTGAAGTGTTTGATGGG 59.721 41.667 0.00 0.00 30.70 4.00
1901 6281 5.443185 ACATGAACTGAAGTGTTTGATGG 57.557 39.130 0.00 0.00 30.70 3.51
1911 6291 6.916440 TCCATCAAATCAACATGAACTGAAG 58.084 36.000 0.00 0.00 28.96 3.02
1914 6294 6.588756 CCTTTCCATCAAATCAACATGAACTG 59.411 38.462 0.00 0.00 0.00 3.16
1927 6307 7.269316 GTTCTAAACCAAACCTTTCCATCAAA 58.731 34.615 0.00 0.00 0.00 2.69
1957 6337 1.544691 GGACGACCAGTGAGAGCTTAA 59.455 52.381 0.00 0.00 35.97 1.85
1974 6354 6.571150 GCATAAGGAGAATTATGGCATTGGAC 60.571 42.308 4.78 0.00 41.47 4.02
2031 6422 7.434013 CGCACTACCAAATAACAAAAGAACTTT 59.566 33.333 0.00 0.00 0.00 2.66
2114 6506 2.817258 GGGAGTCCATCATCTCTACTCG 59.183 54.545 12.30 0.00 37.93 4.18
2119 6511 4.324874 CCTTTTTGGGAGTCCATCATCTCT 60.325 45.833 12.30 0.00 43.63 3.10
2306 7606 3.577848 ACTTGCAGTGGCCATTTTGATAA 59.422 39.130 9.72 6.74 40.13 1.75
2307 7607 3.164268 ACTTGCAGTGGCCATTTTGATA 58.836 40.909 9.72 0.00 40.13 2.15
2308 7608 1.972795 ACTTGCAGTGGCCATTTTGAT 59.027 42.857 9.72 0.00 40.13 2.57
2365 7665 2.579410 TCTTAGTTTCTTGGCCCACC 57.421 50.000 0.00 0.00 0.00 4.61
2395 7695 2.476854 GCCGCAAATCAGAATGTGACTC 60.477 50.000 2.48 0.00 38.28 3.36
2530 8667 7.447374 TGTTGGTAATTTCCAAGTGATACAG 57.553 36.000 16.07 0.00 46.35 2.74
2710 8847 2.484651 GGCCCGAGTCTTTTCTTCTTTC 59.515 50.000 0.00 0.00 0.00 2.62
2727 8864 2.842496 GGGGTAGGTATTACTATGGCCC 59.158 54.545 0.00 0.00 32.61 5.80
2735 8872 6.317663 TGAGGAAAAAGGGGTAGGTATTAC 57.682 41.667 0.00 0.00 0.00 1.89
2758 8895 4.320870 ACAAATCCACGACCTTAACGATT 58.679 39.130 0.00 0.00 34.70 3.34
2883 9020 8.286191 AGCATTCCCTTTTTATAGAAGAAGTG 57.714 34.615 0.38 0.00 0.00 3.16
2890 9027 8.906867 CATTTGAGAGCATTCCCTTTTTATAGA 58.093 33.333 0.00 0.00 0.00 1.98
2895 9032 4.594491 ACCATTTGAGAGCATTCCCTTTTT 59.406 37.500 0.00 0.00 0.00 1.94
2993 9135 8.763356 GCAAGAGAGAGATTGTATTACAGATTG 58.237 37.037 0.00 0.00 0.00 2.67
3126 9268 1.281287 AGCCTGCAGAGAACATGACAT 59.719 47.619 17.39 0.00 0.00 3.06
3370 9513 7.672983 ATAGCTTCGGAACAAATACCATATG 57.327 36.000 0.00 0.00 0.00 1.78
3386 9529 7.308782 AGGAAACATAAAGTCAATAGCTTCG 57.691 36.000 0.00 0.00 0.00 3.79
3495 9638 0.179004 TTTCCCTGCAAGCCTTCGAA 60.179 50.000 0.00 0.00 0.00 3.71
3745 9892 3.492313 GATGAAGGAAATGCGACACAAC 58.508 45.455 0.00 0.00 0.00 3.32
3817 9974 8.668353 CAGAAGAAGATGAATAAACCATTCGAA 58.332 33.333 0.00 0.00 45.25 3.71
3962 10149 6.128486 TCACAAGCCCATGAACAATATGTAT 58.872 36.000 0.00 0.00 0.00 2.29
3965 10152 4.987408 TCACAAGCCCATGAACAATATG 57.013 40.909 0.00 0.00 0.00 1.78
4176 10377 2.039348 TGACAAAGGGGTAGCCAAGTAC 59.961 50.000 14.06 0.00 0.00 2.73
4354 10558 6.321181 ACCAATGCTGAACAACTTTCTCTTTA 59.679 34.615 0.00 0.00 0.00 1.85
4360 10564 4.432712 ACAACCAATGCTGAACAACTTTC 58.567 39.130 0.00 0.00 0.00 2.62
4412 10620 4.696455 AGAAGGGCACTTGTCAAAATTTG 58.304 39.130 5.57 0.00 36.97 2.32
4422 10630 4.559153 CCAATACAAAAGAAGGGCACTTG 58.441 43.478 5.57 0.00 36.97 3.16
4519 10779 5.126222 TGTGCAAATAGGTTTGTCAAGTCAA 59.874 36.000 0.00 0.00 45.14 3.18
4740 11000 2.582052 TGAACAGGTGGATGTTTGACC 58.418 47.619 0.00 0.00 43.32 4.02
4742 11002 5.830457 TGTAAATGAACAGGTGGATGTTTGA 59.170 36.000 0.00 0.00 43.32 2.69
4785 11047 9.412390 GCATTTTATAATGAGAAAAATTGCACG 57.588 29.630 9.76 0.00 43.12 5.34
5061 11327 4.876107 CCACCACATAACATAGTGTTCTCC 59.124 45.833 0.00 0.00 40.22 3.71
5320 11749 7.052248 TCAGACAATCAATTCATACAGCATCT 58.948 34.615 0.00 0.00 0.00 2.90
5356 11798 2.549926 CGTTGCTGCATAGGTCATACA 58.450 47.619 1.84 0.00 0.00 2.29
5394 11840 1.279496 TCCTCAGTTCTGGGACATGG 58.721 55.000 0.77 0.00 38.20 3.66
5543 11990 6.260714 TGATTGTGTTATCTGCATATCCACAC 59.739 38.462 15.39 15.39 31.39 3.82
5552 11999 6.974048 GCATAATGTTGATTGTGTTATCTGCA 59.026 34.615 0.00 0.00 34.14 4.41
5646 12095 1.753073 AGCCCATTATTGTGCTTGCTC 59.247 47.619 0.00 0.00 32.11 4.26
5665 12114 2.076863 GCCATGTAAGCGGGCTATAAG 58.923 52.381 0.00 0.00 44.32 1.73
5722 12171 1.451504 CATGAGCCCGCTCCCATTA 59.548 57.895 13.93 0.00 42.09 1.90
5723 12172 2.194056 CATGAGCCCGCTCCCATT 59.806 61.111 13.93 0.00 42.09 3.16
5724 12173 4.575973 GCATGAGCCCGCTCCCAT 62.576 66.667 13.93 0.00 42.09 4.00
5727 12176 3.207669 CTTGCATGAGCCCGCTCC 61.208 66.667 13.93 0.00 42.09 4.70
5729 12178 2.124819 CTCTTGCATGAGCCCGCT 60.125 61.111 15.83 0.00 41.13 5.52
5770 12219 9.414295 CTCTTTCTTCACATTTATTGCATTTGA 57.586 29.630 0.00 0.00 0.00 2.69
5833 12282 5.217400 ACAAGGTTAGCTATAAGGTAGGCT 58.783 41.667 0.00 0.00 38.62 4.58
5834 12283 5.548181 ACAAGGTTAGCTATAAGGTAGGC 57.452 43.478 0.00 0.00 29.05 3.93
5835 12284 6.885922 ACAACAAGGTTAGCTATAAGGTAGG 58.114 40.000 0.00 0.00 29.05 3.18
5836 12285 9.477484 CATACAACAAGGTTAGCTATAAGGTAG 57.523 37.037 0.00 0.00 29.05 3.18
5837 12286 9.204337 TCATACAACAAGGTTAGCTATAAGGTA 57.796 33.333 0.00 0.00 0.00 3.08
5838 12287 8.086143 TCATACAACAAGGTTAGCTATAAGGT 57.914 34.615 0.00 0.00 0.00 3.50
5839 12288 8.204836 ACTCATACAACAAGGTTAGCTATAAGG 58.795 37.037 0.00 0.00 0.00 2.69
5840 12289 9.035607 CACTCATACAACAAGGTTAGCTATAAG 57.964 37.037 0.00 0.00 0.00 1.73
5841 12290 8.755028 TCACTCATACAACAAGGTTAGCTATAA 58.245 33.333 0.00 0.00 0.00 0.98
5842 12291 8.195436 GTCACTCATACAACAAGGTTAGCTATA 58.805 37.037 0.00 0.00 0.00 1.31
5843 12292 7.042335 GTCACTCATACAACAAGGTTAGCTAT 58.958 38.462 0.00 0.00 0.00 2.97
5844 12293 6.210784 AGTCACTCATACAACAAGGTTAGCTA 59.789 38.462 0.00 0.00 0.00 3.32
5845 12294 5.012148 AGTCACTCATACAACAAGGTTAGCT 59.988 40.000 0.00 0.00 0.00 3.32
5846 12295 5.238583 AGTCACTCATACAACAAGGTTAGC 58.761 41.667 0.00 0.00 0.00 3.09
5849 12298 8.594550 ACTTATAGTCACTCATACAACAAGGTT 58.405 33.333 0.00 0.00 0.00 3.50
5873 12322 5.070847 TGCCATGTCATATGTAGTCATCACT 59.929 40.000 1.90 0.00 35.70 3.41
5874 12323 5.299949 TGCCATGTCATATGTAGTCATCAC 58.700 41.667 1.90 0.00 35.70 3.06
5875 12324 5.549742 TGCCATGTCATATGTAGTCATCA 57.450 39.130 1.90 0.00 35.70 3.07
5876 12325 5.759763 TGTTGCCATGTCATATGTAGTCATC 59.240 40.000 1.90 0.00 35.70 2.92
5877 12326 5.683681 TGTTGCCATGTCATATGTAGTCAT 58.316 37.500 1.90 1.86 38.00 3.06
5878 12327 5.096443 TGTTGCCATGTCATATGTAGTCA 57.904 39.130 1.90 0.00 0.00 3.41
5879 12328 5.759763 TGATGTTGCCATGTCATATGTAGTC 59.240 40.000 1.90 0.00 0.00 2.59
5880 12329 5.683681 TGATGTTGCCATGTCATATGTAGT 58.316 37.500 1.90 0.00 0.00 2.73
5881 12330 6.812879 ATGATGTTGCCATGTCATATGTAG 57.187 37.500 1.90 0.00 0.00 2.74
5882 12331 9.603921 CTATATGATGTTGCCATGTCATATGTA 57.396 33.333 17.91 5.07 33.69 2.29
5883 12332 7.066645 GCTATATGATGTTGCCATGTCATATGT 59.933 37.037 17.91 3.66 33.69 2.29
5884 12333 7.415229 GCTATATGATGTTGCCATGTCATATG 58.585 38.462 17.91 0.00 33.69 1.78
5885 12334 6.544931 GGCTATATGATGTTGCCATGTCATAT 59.455 38.462 9.49 14.90 42.79 1.78
5929 12378 1.672145 GGACACCTTAGAGCACGGTTC 60.672 57.143 0.00 0.00 0.00 3.62
5934 12383 0.391793 GGCAGGACACCTTAGAGCAC 60.392 60.000 0.00 0.00 0.00 4.40
5968 12417 4.479993 CTGCCTAGGCGCCTTGCT 62.480 66.667 35.72 19.20 45.51 3.91
5995 12444 4.853507 GCCTAACGCGGGAAAAAC 57.146 55.556 12.47 0.00 0.00 2.43
6048 12497 1.540580 GGTAAGGCATCCTAAGGCGAC 60.541 57.143 0.00 0.00 36.55 5.19
6088 12537 5.521372 TGATCATCTGAACTGCTGAAATACG 59.479 40.000 0.00 0.00 0.00 3.06
6108 12558 3.104843 AGAAGCCTGCGAGTAATGATC 57.895 47.619 0.00 0.00 0.00 2.92
6118 12568 1.927710 GCTTGTTTGAAGAAGCCTGCG 60.928 52.381 12.98 0.00 46.21 5.18
6133 12583 2.350388 CGTGCCATTAAACGAAGCTTGT 60.350 45.455 2.10 0.00 42.32 3.16
6136 12586 0.802494 CCGTGCCATTAAACGAAGCT 59.198 50.000 0.00 0.00 42.32 3.74
6137 12587 0.796870 GCCGTGCCATTAAACGAAGC 60.797 55.000 0.00 0.00 42.32 3.86
6138 12588 0.802494 AGCCGTGCCATTAAACGAAG 59.198 50.000 0.00 0.00 42.32 3.79
6139 12589 0.519519 CAGCCGTGCCATTAAACGAA 59.480 50.000 0.00 0.00 42.32 3.85
6140 12590 1.302383 CCAGCCGTGCCATTAAACGA 61.302 55.000 0.00 0.00 42.32 3.85
6141 12591 1.136565 CCAGCCGTGCCATTAAACG 59.863 57.895 0.00 0.00 39.48 3.60
6142 12592 0.109319 CACCAGCCGTGCCATTAAAC 60.109 55.000 0.00 0.00 35.18 2.01
6143 12593 2.262183 CACCAGCCGTGCCATTAAA 58.738 52.632 0.00 0.00 35.18 1.52
6144 12594 3.995074 CACCAGCCGTGCCATTAA 58.005 55.556 0.00 0.00 35.18 1.40
6155 12605 3.310727 AAAAATGCAAGGCACCAGC 57.689 47.368 0.00 0.00 43.04 4.85
6175 12625 5.409214 GCATAAGCAAGGAAGCAATGAAAAA 59.591 36.000 0.00 0.00 41.58 1.94
6213 12663 8.880750 GTTAGTTATCCACTATGAACTTTGGTC 58.119 37.037 0.00 0.00 37.84 4.02
6217 12667 8.159229 AGGGTTAGTTATCCACTATGAACTTT 57.841 34.615 0.00 0.00 37.84 2.66
6254 12738 1.878088 GTCCTCGAAACCTTTGGGAAC 59.122 52.381 0.00 0.00 36.25 3.62
6258 12742 1.202770 ACCTGTCCTCGAAACCTTTGG 60.203 52.381 0.00 0.00 0.00 3.28
6337 12821 2.750237 GCGCACCAGTTTAGGGGG 60.750 66.667 0.30 0.00 30.71 5.40
6363 12861 2.285977 GTTAGTAACTGGGAATGCCGG 58.714 52.381 5.75 0.00 33.83 6.13
6376 12874 4.083565 GGAATGCAGGTTTGGGTTAGTAA 58.916 43.478 0.00 0.00 0.00 2.24
6386 12884 0.322546 GGACGGAGGAATGCAGGTTT 60.323 55.000 0.00 0.00 0.00 3.27
6566 13069 1.736032 CGAGTAAAGGGCTGGTTCTCG 60.736 57.143 0.00 0.00 37.55 4.04
6612 13123 4.003011 TTGCCAACACGTACGCGC 62.003 61.111 16.72 9.83 42.83 6.86
6741 13252 2.616376 CAACGACACATCCAAACCAGAA 59.384 45.455 0.00 0.00 0.00 3.02
6759 13270 0.166814 CTCGCCAAGCTAGCAACAAC 59.833 55.000 18.83 0.98 0.00 3.32
6790 13301 3.923461 CGGCAATCTGAATAGCTAGCTAC 59.077 47.826 26.41 15.20 0.00 3.58
6818 13334 6.261158 GGGCTAGCACTCCTAATAAAAAGAAG 59.739 42.308 18.24 0.00 0.00 2.85
6819 13335 6.120220 GGGCTAGCACTCCTAATAAAAAGAA 58.880 40.000 18.24 0.00 0.00 2.52
6867 13403 1.685302 CACTCCCGCGAACAAATTTG 58.315 50.000 16.67 16.67 0.00 2.32
6973 13516 0.529992 GGCCCATACTACTGCGACAC 60.530 60.000 0.00 0.00 0.00 3.67
6974 13517 1.682451 GGGCCCATACTACTGCGACA 61.682 60.000 19.95 0.00 0.00 4.35
6975 13518 1.069258 GGGCCCATACTACTGCGAC 59.931 63.158 19.95 0.00 0.00 5.19
6976 13519 1.382009 TGGGCCCATACTACTGCGA 60.382 57.895 24.45 0.00 0.00 5.10
6991 13629 1.835693 GGAGAGAATGGAGGCTGGG 59.164 63.158 0.00 0.00 0.00 4.45
7002 13640 0.318441 CTTCTGCACCACGGAGAGAA 59.682 55.000 0.00 0.00 43.74 2.87
7010 13648 0.465460 TCCACCAACTTCTGCACCAC 60.465 55.000 0.00 0.00 0.00 4.16
7058 13700 2.488355 CGGACGGCGTGTATCTGT 59.512 61.111 21.19 0.00 0.00 3.41
7059 13701 2.278596 CCGGACGGCGTGTATCTG 60.279 66.667 21.19 7.92 0.00 2.90
7060 13702 2.753043 ACCGGACGGCGTGTATCT 60.753 61.111 21.19 0.00 39.32 1.98
7061 13703 2.278401 GACCGGACGGCGTGTATC 60.278 66.667 21.19 5.79 39.32 2.24
7062 13704 2.552585 CTTGACCGGACGGCGTGTAT 62.553 60.000 21.19 0.00 39.32 2.29
7063 13705 3.271706 CTTGACCGGACGGCGTGTA 62.272 63.158 21.19 0.00 39.32 2.90
7064 13706 4.657824 CTTGACCGGACGGCGTGT 62.658 66.667 21.19 9.77 39.32 4.49
7065 13707 4.657824 ACTTGACCGGACGGCGTG 62.658 66.667 21.19 5.62 39.32 5.34
7067 13709 3.569049 AAGACTTGACCGGACGGCG 62.569 63.158 9.46 4.80 39.32 6.46
7069 13711 1.566018 GCAAAGACTTGACCGGACGG 61.566 60.000 9.46 9.56 34.14 4.79
7070 13712 1.860078 GCAAAGACTTGACCGGACG 59.140 57.895 9.46 0.00 34.14 4.79
7071 13713 0.878961 ACGCAAAGACTTGACCGGAC 60.879 55.000 9.46 1.07 34.14 4.79
7072 13714 0.599204 GACGCAAAGACTTGACCGGA 60.599 55.000 9.46 0.00 34.14 5.14
7073 13715 1.860078 GACGCAAAGACTTGACCGG 59.140 57.895 0.00 0.00 34.14 5.28
7074 13716 1.213094 ACGACGCAAAGACTTGACCG 61.213 55.000 0.00 0.00 34.14 4.79
7076 13718 1.326548 ACAACGACGCAAAGACTTGAC 59.673 47.619 0.00 0.00 34.14 3.18
7078 13720 2.655577 CGTACAACGACGCAAAGACTTG 60.656 50.000 0.00 0.00 46.05 3.16
7079 13721 1.519758 CGTACAACGACGCAAAGACTT 59.480 47.619 0.00 0.00 46.05 3.01
7080 13722 1.126079 CGTACAACGACGCAAAGACT 58.874 50.000 0.00 0.00 46.05 3.24
7101 13743 7.500992 TGTAGATCATCAATTCCTACCAGAAC 58.499 38.462 0.00 0.00 31.32 3.01
7155 13797 1.484240 ACTAGAGCTTGGAGATGGCAC 59.516 52.381 0.00 0.00 0.00 5.01
7163 13805 5.099042 GGAACCATTAACTAGAGCTTGGA 57.901 43.478 3.85 0.00 0.00 3.53
7186 13828 2.359602 CCTGAGCAGGGCACTGTG 60.360 66.667 19.18 2.76 46.62 3.66
7286 14267 3.777925 CGCAACGCAACCCTCTCG 61.778 66.667 0.00 0.00 0.00 4.04
7288 14269 2.203153 AACGCAACGCAACCCTCT 60.203 55.556 0.00 0.00 0.00 3.69
7289 14270 2.051345 CAACGCAACGCAACCCTC 60.051 61.111 0.00 0.00 0.00 4.30
7290 14271 4.264638 GCAACGCAACGCAACCCT 62.265 61.111 0.00 0.00 0.00 4.34
7291 14272 3.839642 ATGCAACGCAACGCAACCC 62.840 57.895 0.00 0.00 43.62 4.11
7292 14273 2.354539 ATGCAACGCAACGCAACC 60.355 55.556 0.00 0.00 43.62 3.77
7293 14274 2.838646 CATGCAACGCAACGCAAC 59.161 55.556 0.00 0.00 43.62 4.17
7294 14275 3.029162 GCATGCAACGCAACGCAA 61.029 55.556 14.21 0.00 43.62 4.85
7303 14286 2.017783 CACTGTTGGCGCATGCAAC 61.018 57.895 19.57 17.71 45.35 4.17
7407 14403 1.433837 CGCACACGGGCCCTAATAAC 61.434 60.000 22.43 3.70 34.97 1.89
7425 14423 2.972505 GGCCACACACACCTCACG 60.973 66.667 0.00 0.00 0.00 4.35
7426 14424 0.823356 ATTGGCCACACACACCTCAC 60.823 55.000 3.88 0.00 0.00 3.51
7427 14425 0.822944 CATTGGCCACACACACCTCA 60.823 55.000 3.88 0.00 0.00 3.86
7428 14426 1.526575 CCATTGGCCACACACACCTC 61.527 60.000 3.88 0.00 0.00 3.85
7429 14427 1.531365 CCATTGGCCACACACACCT 60.531 57.895 3.88 0.00 0.00 4.00
7449 14447 2.039084 ACCAGAGACAAGATGGACAACC 59.961 50.000 0.00 0.00 37.54 3.77
7491 14492 7.943447 GCCGTCTCCCTCTCCTAATAATATATA 59.057 40.741 0.00 0.00 0.00 0.86
7492 14493 6.778559 GCCGTCTCCCTCTCCTAATAATATAT 59.221 42.308 0.00 0.00 0.00 0.86
7493 14494 6.068971 AGCCGTCTCCCTCTCCTAATAATATA 60.069 42.308 0.00 0.00 0.00 0.86
7494 14495 4.957327 GCCGTCTCCCTCTCCTAATAATAT 59.043 45.833 0.00 0.00 0.00 1.28
7495 14496 4.044317 AGCCGTCTCCCTCTCCTAATAATA 59.956 45.833 0.00 0.00 0.00 0.98
7496 14497 3.166679 GCCGTCTCCCTCTCCTAATAAT 58.833 50.000 0.00 0.00 0.00 1.28
7553 14554 0.896226 AAGGACTAAGACGGGTCTGC 59.104 55.000 1.44 0.00 40.36 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.