Multiple sequence alignment - TraesCS5A01G418500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G418500 chr5A 100.000 5947 0 0 1 5947 606355016 606349070 0.000000e+00 10983.0
1 TraesCS5A01G418500 chr5A 79.634 383 65 5 4561 4939 329992459 329992086 4.570000e-66 263.0
2 TraesCS5A01G418500 chr5A 95.798 119 5 0 477 595 689428008 689428126 6.080000e-45 193.0
3 TraesCS5A01G418500 chr5A 95.690 116 4 1 5073 5187 32796138 32796253 1.020000e-42 185.0
4 TraesCS5A01G418500 chr5A 93.388 121 7 1 4227 4347 9649821 9649940 1.700000e-40 178.0
5 TraesCS5A01G418500 chr5A 87.879 99 11 1 700 797 606392509 606392411 1.350000e-21 115.0
6 TraesCS5A01G418500 chr5A 96.296 54 2 0 34 87 606362698 606362645 8.210000e-14 89.8
7 TraesCS5A01G418500 chr5B 96.018 3566 112 12 699 4237 596825951 596822389 0.000000e+00 5771.0
8 TraesCS5A01G418500 chr5B 96.162 2840 106 3 1398 4237 596223409 596226245 0.000000e+00 4638.0
9 TraesCS5A01G418500 chr5B 94.395 2266 114 9 1970 4234 596393689 596395942 0.000000e+00 3469.0
10 TraesCS5A01G418500 chr5B 79.332 2187 421 26 1864 4034 280605841 280603670 0.000000e+00 1506.0
11 TraesCS5A01G418500 chr5B 94.621 725 25 5 699 1410 596211003 596211726 0.000000e+00 1110.0
12 TraesCS5A01G418500 chr5B 92.297 740 52 3 4340 5075 596822392 596821654 0.000000e+00 1046.0
13 TraesCS5A01G418500 chr5B 91.678 745 51 5 4340 5075 596226242 596226984 0.000000e+00 1022.0
14 TraesCS5A01G418500 chr5B 89.891 732 69 4 4342 5071 596395944 596396672 0.000000e+00 937.0
15 TraesCS5A01G418500 chr5B 86.375 778 68 23 5181 5944 596396677 596397430 0.000000e+00 815.0
16 TraesCS5A01G418500 chr5B 86.723 708 50 23 5183 5885 596226987 596227655 0.000000e+00 747.0
17 TraesCS5A01G418500 chr5B 86.364 726 49 24 5179 5888 596821655 596820964 0.000000e+00 747.0
18 TraesCS5A01G418500 chr5B 92.841 447 23 3 37 479 596826536 596826095 1.810000e-179 640.0
19 TraesCS5A01G418500 chr5B 91.429 455 22 5 37 479 596205283 596205732 5.100000e-170 608.0
20 TraesCS5A01G418500 chr5B 93.469 245 14 2 1737 1981 596388706 596388948 4.380000e-96 363.0
21 TraesCS5A01G418500 chr5B 79.750 400 70 3 4556 4953 280647693 280647303 4.540000e-71 279.0
22 TraesCS5A01G418500 chr5B 79.075 411 71 4 4556 4963 280603530 280603132 9.820000e-68 268.0
23 TraesCS5A01G418500 chr5B 98.261 115 0 2 5074 5186 340250338 340250224 3.630000e-47 200.0
24 TraesCS5A01G418500 chr5B 76.776 366 69 12 78 431 596833337 596832976 2.190000e-44 191.0
25 TraesCS5A01G418500 chr5B 93.130 131 5 4 4229 4355 622393436 622393566 7.870000e-44 189.0
26 TraesCS5A01G418500 chr5B 87.821 156 19 0 1295 1450 596827777 596827622 3.660000e-42 183.0
27 TraesCS5A01G418500 chr5B 95.614 114 4 1 592 704 596826098 596825985 1.320000e-41 182.0
28 TraesCS5A01G418500 chr5B 87.179 156 20 0 1295 1450 596204059 596204214 1.700000e-40 178.0
29 TraesCS5A01G418500 chr5B 98.889 90 1 0 606 695 596210870 596210959 1.720000e-35 161.0
30 TraesCS5A01G418500 chr5B 93.023 86 6 0 1 86 596205198 596205283 6.260000e-25 126.0
31 TraesCS5A01G418500 chr5B 94.444 72 4 0 15 86 596826607 596826536 1.750000e-20 111.0
32 TraesCS5A01G418500 chr5B 95.161 62 3 0 643 704 596315713 596315774 1.360000e-16 99.0
33 TraesCS5A01G418500 chr5B 86.022 93 11 2 282 373 596349466 596349557 1.360000e-16 99.0
34 TraesCS5A01G418500 chr5B 95.082 61 3 0 644 704 596724693 596724633 4.910000e-16 97.1
35 TraesCS5A01G418500 chr5B 90.278 72 7 0 1033 1104 596723391 596723320 1.760000e-15 95.3
36 TraesCS5A01G418500 chr5D 95.449 3560 133 9 699 4237 485061516 485057965 0.000000e+00 5650.0
37 TraesCS5A01G418500 chr5D 78.755 1944 381 24 2144 4073 246012369 246010444 0.000000e+00 1273.0
38 TraesCS5A01G418500 chr5D 91.123 721 56 4 4359 5075 485057858 485057142 0.000000e+00 970.0
39 TraesCS5A01G418500 chr5D 86.044 781 72 21 5179 5947 485057143 485056388 0.000000e+00 804.0
40 TraesCS5A01G418500 chr5D 90.020 491 31 6 1 479 485062143 485061659 2.350000e-173 619.0
41 TraesCS5A01G418500 chr5D 82.923 568 72 14 907 1450 485092191 485091625 6.930000e-134 488.0
42 TraesCS5A01G418500 chr5D 79.730 370 62 5 4556 4921 246010013 246009653 7.650000e-64 255.0
43 TraesCS5A01G418500 chr5D 95.041 121 5 1 476 595 461071641 461071761 7.870000e-44 189.0
44 TraesCS5A01G418500 chr5D 94.690 113 6 0 592 704 485061662 485061550 6.130000e-40 176.0
45 TraesCS5A01G418500 chr7D 78.568 2263 454 27 1819 4066 19050601 19052847 0.000000e+00 1463.0
46 TraesCS5A01G418500 chr7D 78.689 366 69 5 4583 4943 19052903 19053264 9.960000e-58 235.0
47 TraesCS5A01G418500 chr4A 78.418 2275 467 22 1803 4066 741159895 741162156 0.000000e+00 1459.0
48 TraesCS5A01G418500 chr4A 79.555 1213 223 18 2855 4059 739781595 739782790 0.000000e+00 843.0
49 TraesCS5A01G418500 chr4A 98.148 108 2 0 4236 4343 605663361 605663468 7.870000e-44 189.0
50 TraesCS5A01G418500 chr7A 78.417 2261 461 23 1819 4066 19516812 19519058 0.000000e+00 1447.0
51 TraesCS5A01G418500 chr7A 78.828 2116 418 28 1964 4065 2959095 2956996 0.000000e+00 1399.0
52 TraesCS5A01G418500 chr3B 95.868 121 5 0 477 597 70295983 70295863 4.700000e-46 196.0
53 TraesCS5A01G418500 chr6B 95.122 123 6 0 473 595 617675160 617675282 1.690000e-45 195.0
54 TraesCS5A01G418500 chr3A 97.345 113 3 0 5071 5183 396620926 396620814 6.080000e-45 193.0
55 TraesCS5A01G418500 chr3A 92.126 127 8 2 5074 5199 19299540 19299665 1.700000e-40 178.0
56 TraesCS5A01G418500 chr4D 95.041 121 6 0 477 597 494876030 494875910 2.190000e-44 191.0
57 TraesCS5A01G418500 chr4D 94.309 123 7 0 475 597 367720767 367720889 7.870000e-44 189.0
58 TraesCS5A01G418500 chr2A 95.763 118 5 0 478 595 729162003 729162120 2.190000e-44 191.0
59 TraesCS5A01G418500 chr2A 95.690 116 4 1 4228 4343 650256586 650256700 1.020000e-42 185.0
60 TraesCS5A01G418500 chr2A 90.000 140 10 4 477 615 688769170 688769306 1.700000e-40 178.0
61 TraesCS5A01G418500 chr2B 93.750 128 5 3 4230 4355 621062520 621062646 7.870000e-44 189.0
62 TraesCS5A01G418500 chr2B 90.840 131 10 2 4221 4350 783405502 783405631 2.200000e-39 174.0
63 TraesCS5A01G418500 chr1A 95.690 116 5 0 5073 5188 53905142 53905027 2.830000e-43 187.0
64 TraesCS5A01G418500 chr1A 97.273 110 3 0 5071 5180 119717406 119717297 2.830000e-43 187.0
65 TraesCS5A01G418500 chr1A 94.262 122 7 0 477 598 498452786 498452665 2.830000e-43 187.0
66 TraesCS5A01G418500 chr1A 93.548 124 7 1 4228 4350 58903727 58903850 3.660000e-42 183.0
67 TraesCS5A01G418500 chr1A 93.600 125 4 4 4235 4359 384334556 384334436 3.660000e-42 183.0
68 TraesCS5A01G418500 chr1A 93.333 120 8 0 4228 4347 362406388 362406269 1.700000e-40 178.0
69 TraesCS5A01G418500 chr6A 97.222 108 3 0 5074 5181 408886077 408886184 3.660000e-42 183.0
70 TraesCS5A01G418500 chr1B 93.443 122 7 1 5074 5194 386204592 386204471 4.740000e-41 180.0
71 TraesCS5A01G418500 chr7B 93.388 121 7 1 5073 5192 27494502 27494382 1.700000e-40 178.0
72 TraesCS5A01G418500 chr7B 88.722 133 13 2 5073 5203 23730915 23730783 1.720000e-35 161.0
73 TraesCS5A01G418500 chr7B 88.722 133 13 2 5073 5203 23791813 23791681 1.720000e-35 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G418500 chr5A 606349070 606355016 5946 True 10983.000000 10983 100.000000 1 5947 1 chr5A.!!$R2 5946
1 TraesCS5A01G418500 chr5B 596223409 596227655 4246 False 2135.666667 4638 91.521000 1398 5885 3 chr5B.!!$F7 4487
2 TraesCS5A01G418500 chr5B 596393689 596397430 3741 False 1740.333333 3469 90.220333 1970 5944 3 chr5B.!!$F8 3974
3 TraesCS5A01G418500 chr5B 596820964 596827777 6813 True 1240.000000 5771 92.199857 15 5888 7 chr5B.!!$R6 5873
4 TraesCS5A01G418500 chr5B 280603132 280605841 2709 True 887.000000 1506 79.203500 1864 4963 2 chr5B.!!$R4 3099
5 TraesCS5A01G418500 chr5B 596210870 596211726 856 False 635.500000 1110 96.755000 606 1410 2 chr5B.!!$F6 804
6 TraesCS5A01G418500 chr5B 596204059 596205732 1673 False 304.000000 608 90.543667 1 1450 3 chr5B.!!$F5 1449
7 TraesCS5A01G418500 chr5D 485056388 485062143 5755 True 1643.800000 5650 91.465200 1 5947 5 chr5D.!!$R3 5946
8 TraesCS5A01G418500 chr5D 246009653 246012369 2716 True 764.000000 1273 79.242500 2144 4921 2 chr5D.!!$R2 2777
9 TraesCS5A01G418500 chr5D 485091625 485092191 566 True 488.000000 488 82.923000 907 1450 1 chr5D.!!$R1 543
10 TraesCS5A01G418500 chr7D 19050601 19053264 2663 False 849.000000 1463 78.628500 1819 4943 2 chr7D.!!$F1 3124
11 TraesCS5A01G418500 chr4A 741159895 741162156 2261 False 1459.000000 1459 78.418000 1803 4066 1 chr4A.!!$F3 2263
12 TraesCS5A01G418500 chr4A 739781595 739782790 1195 False 843.000000 843 79.555000 2855 4059 1 chr4A.!!$F2 1204
13 TraesCS5A01G418500 chr7A 19516812 19519058 2246 False 1447.000000 1447 78.417000 1819 4066 1 chr7A.!!$F1 2247
14 TraesCS5A01G418500 chr7A 2956996 2959095 2099 True 1399.000000 1399 78.828000 1964 4065 1 chr7A.!!$R1 2101

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
587 1810 0.034896 GACAAGCTTTCTGGGACGGA 59.965 55.000 0.00 0.00 45.11 4.69 F
695 1919 1.392534 CACCAGGTCCTCTAGGGGT 59.607 63.158 8.98 0.00 35.41 4.95 F
1861 3170 4.104102 TCCCAAGCAATATAGGTAACCTGG 59.896 45.833 0.00 0.00 34.61 4.45 F
2100 3409 0.461961 ACATAGAGGACTTGCGGCTC 59.538 55.000 0.00 0.00 0.00 4.70 F
3157 4618 0.101759 ACCATCATTTCAGCGCATGC 59.898 50.000 11.47 7.91 43.24 4.06 F
4625 6308 1.229975 TGACGGAGAAGTGCGACGTA 61.230 55.000 0.00 0.00 40.58 3.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 3170 3.072211 GGTACAAGGTAGTGAGTTTGGC 58.928 50.000 0.00 0.0 0.00 4.52 R
1907 3216 3.528597 AACCTAGTTCTCGAGGAATGC 57.471 47.619 13.56 0.0 38.48 3.56 R
2797 4251 1.677576 CAGGCTCAAGTTGAACAGCAA 59.322 47.619 15.16 0.0 0.00 3.91 R
3459 4926 2.957402 AGTTCCAGATGGCAAACAGA 57.043 45.000 0.00 0.0 34.44 3.41 R
4628 6311 0.040958 GCACGAGCACTCCAAAACTG 60.041 55.000 0.00 0.0 41.58 3.16 R
5833 7551 0.453950 GCACTGCTGATTCTTGTGCG 60.454 55.000 0.00 0.0 43.19 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 1179 3.188786 CGCAGCCCGTAGAAGCAC 61.189 66.667 0.00 0.00 0.00 4.40
42 1199 5.819379 AGCACGTCATGTTCTGATTAATCAT 59.181 36.000 18.26 0.60 35.97 2.45
51 1208 9.415544 CATGTTCTGATTAATCATCGATGAGTA 57.584 33.333 30.11 28.41 40.64 2.59
89 1295 6.655003 CAGTAACCACTTGTCCATTAATGACT 59.345 38.462 17.23 4.80 30.46 3.41
191 1397 2.274948 CTTCATAGCAGGCAGGCCCA 62.275 60.000 6.70 0.00 36.58 5.36
210 1416 2.031682 CCACTTTTCTTCTTCACCAGCG 60.032 50.000 0.00 0.00 0.00 5.18
417 1640 1.002502 AAGGAAAGTACCCAGCCGC 60.003 57.895 0.00 0.00 0.00 6.53
474 1697 5.630680 GTGTACCGTTTAATCGAGTCAGAAA 59.369 40.000 7.50 0.00 0.00 2.52
475 1698 6.144402 GTGTACCGTTTAATCGAGTCAGAAAA 59.856 38.462 7.50 0.00 0.00 2.29
476 1699 5.840940 ACCGTTTAATCGAGTCAGAAAAG 57.159 39.130 7.50 0.00 0.00 2.27
477 1700 5.295152 ACCGTTTAATCGAGTCAGAAAAGT 58.705 37.500 7.50 0.00 0.00 2.66
478 1701 6.449698 ACCGTTTAATCGAGTCAGAAAAGTA 58.550 36.000 7.50 0.00 0.00 2.24
479 1702 6.364435 ACCGTTTAATCGAGTCAGAAAAGTAC 59.636 38.462 7.50 0.00 0.00 2.73
480 1703 6.585322 CCGTTTAATCGAGTCAGAAAAGTACT 59.415 38.462 7.50 0.00 0.00 2.73
481 1704 7.201333 CCGTTTAATCGAGTCAGAAAAGTACTC 60.201 40.741 7.50 0.00 36.99 2.59
482 1705 7.201333 CGTTTAATCGAGTCAGAAAAGTACTCC 60.201 40.741 0.00 0.00 37.02 3.85
483 1706 4.722361 ATCGAGTCAGAAAAGTACTCCC 57.278 45.455 0.00 0.00 37.02 4.30
484 1707 3.764218 TCGAGTCAGAAAAGTACTCCCT 58.236 45.455 0.00 0.00 37.02 4.20
485 1708 3.757493 TCGAGTCAGAAAAGTACTCCCTC 59.243 47.826 0.00 0.00 37.02 4.30
486 1709 3.119424 CGAGTCAGAAAAGTACTCCCTCC 60.119 52.174 0.00 0.00 37.02 4.30
487 1710 2.826725 AGTCAGAAAAGTACTCCCTCCG 59.173 50.000 0.00 0.00 0.00 4.63
488 1711 2.561858 GTCAGAAAAGTACTCCCTCCGT 59.438 50.000 0.00 0.00 0.00 4.69
489 1712 2.824341 TCAGAAAAGTACTCCCTCCGTC 59.176 50.000 0.00 0.00 0.00 4.79
490 1713 2.094130 CAGAAAAGTACTCCCTCCGTCC 60.094 54.545 0.00 0.00 0.00 4.79
491 1714 0.893447 AAAAGTACTCCCTCCGTCCG 59.107 55.000 0.00 0.00 0.00 4.79
492 1715 0.038744 AAAGTACTCCCTCCGTCCGA 59.961 55.000 0.00 0.00 0.00 4.55
493 1716 0.038744 AAGTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
494 1717 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
495 1718 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
496 1719 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
497 1720 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
498 1721 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
499 1722 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
500 1723 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
501 1724 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
502 1725 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
503 1726 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
504 1727 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
505 1728 0.941542 CGTCCGAAAAAGCTTGTCCA 59.058 50.000 0.00 0.00 0.00 4.02
506 1729 1.535462 CGTCCGAAAAAGCTTGTCCAT 59.465 47.619 0.00 0.00 0.00 3.41
507 1730 2.412847 CGTCCGAAAAAGCTTGTCCATC 60.413 50.000 0.00 0.00 0.00 3.51
508 1731 2.552315 GTCCGAAAAAGCTTGTCCATCA 59.448 45.455 0.00 0.00 0.00 3.07
509 1732 3.004315 GTCCGAAAAAGCTTGTCCATCAA 59.996 43.478 0.00 0.00 34.61 2.57
510 1733 3.634448 TCCGAAAAAGCTTGTCCATCAAA 59.366 39.130 0.00 0.00 35.48 2.69
511 1734 4.280677 TCCGAAAAAGCTTGTCCATCAAAT 59.719 37.500 0.00 0.00 35.48 2.32
512 1735 4.386652 CCGAAAAAGCTTGTCCATCAAATG 59.613 41.667 0.00 0.00 35.48 2.32
527 1750 6.492007 CATCAAATGGATGTATCTAGCACC 57.508 41.667 0.00 0.00 46.81 5.01
528 1751 5.628797 TCAAATGGATGTATCTAGCACCA 57.371 39.130 0.00 0.00 0.00 4.17
529 1752 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
530 1753 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
531 1754 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
532 1755 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
533 1756 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
534 1757 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
535 1758 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
536 1759 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
548 1771 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
549 1772 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
550 1773 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
551 1774 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
552 1775 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
553 1776 9.764363 CAAGTTAGTGCTAGATACATCCATTTA 57.236 33.333 0.00 0.00 0.00 1.40
555 1778 9.988815 AGTTAGTGCTAGATACATCCATTTAAG 57.011 33.333 0.00 0.00 0.00 1.85
556 1779 9.982651 GTTAGTGCTAGATACATCCATTTAAGA 57.017 33.333 0.00 0.00 0.00 2.10
559 1782 9.331282 AGTGCTAGATACATCCATTTAAGAAAC 57.669 33.333 0.00 0.00 0.00 2.78
560 1783 9.109393 GTGCTAGATACATCCATTTAAGAAACA 57.891 33.333 0.00 0.00 0.00 2.83
561 1784 9.679661 TGCTAGATACATCCATTTAAGAAACAA 57.320 29.630 0.00 0.00 0.00 2.83
564 1787 8.814038 AGATACATCCATTTAAGAAACAAGCT 57.186 30.769 0.00 0.00 0.00 3.74
565 1788 9.247861 AGATACATCCATTTAAGAAACAAGCTT 57.752 29.630 0.00 0.00 0.00 3.74
566 1789 9.294030 GATACATCCATTTAAGAAACAAGCTTG 57.706 33.333 24.84 24.84 0.00 4.01
567 1790 6.458210 ACATCCATTTAAGAAACAAGCTTGG 58.542 36.000 29.18 12.28 0.00 3.61
568 1791 5.467035 TCCATTTAAGAAACAAGCTTGGG 57.533 39.130 29.18 16.37 0.00 4.12
569 1792 5.144100 TCCATTTAAGAAACAAGCTTGGGA 58.856 37.500 29.18 18.26 0.00 4.37
570 1793 5.010617 TCCATTTAAGAAACAAGCTTGGGAC 59.989 40.000 29.18 18.46 0.00 4.46
571 1794 5.221422 CCATTTAAGAAACAAGCTTGGGACA 60.221 40.000 29.18 7.44 0.00 4.02
583 1806 2.550787 TGGGACAAGCTTTCTGGGA 58.449 52.632 0.00 0.00 31.92 4.37
584 1807 0.110486 TGGGACAAGCTTTCTGGGAC 59.890 55.000 0.00 0.00 31.92 4.46
585 1808 0.955919 GGGACAAGCTTTCTGGGACG 60.956 60.000 0.00 0.00 0.00 4.79
586 1809 0.955919 GGACAAGCTTTCTGGGACGG 60.956 60.000 0.00 0.00 0.00 4.79
587 1810 0.034896 GACAAGCTTTCTGGGACGGA 59.965 55.000 0.00 0.00 45.11 4.69
603 1826 3.208335 GAGGGAGTAGTGCCGTCC 58.792 66.667 1.96 0.00 39.79 4.79
695 1919 1.392534 CACCAGGTCCTCTAGGGGT 59.607 63.158 8.98 0.00 35.41 4.95
784 2048 6.590234 AACTTTGACTTTGAAAGAACAGGT 57.410 33.333 12.53 10.39 34.94 4.00
802 2066 7.984050 AGAACAGGTGTCATAATCTATGTCAAG 59.016 37.037 0.00 0.00 36.32 3.02
904 2169 4.371681 AGGGGTGGTTAATCAGTCATACT 58.628 43.478 0.00 0.00 0.00 2.12
905 2170 4.409247 AGGGGTGGTTAATCAGTCATACTC 59.591 45.833 0.00 0.00 0.00 2.59
964 2245 4.301072 TGATTTAAGGTGAACCCTCCAG 57.699 45.455 0.00 0.00 45.47 3.86
996 2277 6.771749 CAGAAGCAGAATCAATTCCTATCCTT 59.228 38.462 0.00 0.00 37.51 3.36
1380 2689 8.951243 GTGAATATTAAGCTCCTCAAAGAACTT 58.049 33.333 0.00 0.00 0.00 2.66
1476 2785 4.712476 GTCTCCTAATGCTCCATGACAAT 58.288 43.478 0.00 0.00 0.00 2.71
1861 3170 4.104102 TCCCAAGCAATATAGGTAACCTGG 59.896 45.833 0.00 0.00 34.61 4.45
1907 3216 3.408634 ACCATAACCAACTTTCTGGACG 58.591 45.455 0.00 0.00 38.96 4.79
2100 3409 0.461961 ACATAGAGGACTTGCGGCTC 59.538 55.000 0.00 0.00 0.00 4.70
2201 3654 5.362717 AGAACCAACTTTCCGGAAAAATTCT 59.637 36.000 28.62 24.85 0.00 2.40
2797 4251 4.079253 ACTGGAGATTGGCAATTTAACGT 58.921 39.130 14.93 6.85 0.00 3.99
2817 4271 1.311859 TGCTGTTCAACTTGAGCCTG 58.688 50.000 3.43 0.00 0.00 4.85
2868 4322 9.877178 ATACCTAAAGATATTGGATCGCTAAAG 57.123 33.333 0.00 0.00 0.00 1.85
2988 4449 3.301794 AATCACCTCAATGGCAGCATA 57.698 42.857 0.00 0.00 40.22 3.14
3157 4618 0.101759 ACCATCATTTCAGCGCATGC 59.898 50.000 11.47 7.91 43.24 4.06
3219 4680 1.257743 GGTCAGTGCCACAGAGTAGA 58.742 55.000 0.00 0.00 0.00 2.59
3241 4702 4.853924 TTGTTTGAAGAAGCTCCAATCC 57.146 40.909 0.00 0.00 0.00 3.01
3397 4864 7.843490 TTTCTGTTTATCATGGCACTAGTAC 57.157 36.000 0.00 0.00 0.00 2.73
3413 4880 6.581166 GCACTAGTACCTTTGCAATGTAAAAC 59.419 38.462 0.00 0.00 34.97 2.43
3414 4881 7.644490 CACTAGTACCTTTGCAATGTAAAACA 58.356 34.615 0.00 0.00 0.00 2.83
4113 5586 1.681264 TCGACCGATGTCATGCATAGT 59.319 47.619 0.00 4.48 41.85 2.12
4171 5718 7.044798 AGTTGCATAGATCTTCCTAACTGTTC 58.955 38.462 0.00 0.00 0.00 3.18
4183 5730 5.590818 TCCTAACTGTTCCAGGAAGTAGAT 58.409 41.667 16.84 9.78 35.52 1.98
4226 5773 7.742963 GTGTAAATGTAACCAATTGTACAGTCG 59.257 37.037 12.73 0.00 0.00 4.18
4233 5780 7.710044 TGTAACCAATTGTACAGTCGAAAACTA 59.290 33.333 4.43 0.00 36.07 2.24
4234 5781 6.780706 ACCAATTGTACAGTCGAAAACTAG 57.219 37.500 4.43 0.00 36.07 2.57
4235 5782 6.285990 ACCAATTGTACAGTCGAAAACTAGT 58.714 36.000 4.43 0.00 36.07 2.57
4236 5783 7.436118 ACCAATTGTACAGTCGAAAACTAGTA 58.564 34.615 4.43 0.00 36.07 1.82
4237 5784 7.383300 ACCAATTGTACAGTCGAAAACTAGTAC 59.617 37.037 4.43 0.00 39.87 2.73
4238 5785 7.148689 CCAATTGTACAGTCGAAAACTAGTACC 60.149 40.741 4.43 0.00 39.34 3.34
4239 5786 5.376854 TGTACAGTCGAAAACTAGTACCC 57.623 43.478 0.00 0.00 39.34 3.69
4240 5787 3.949842 ACAGTCGAAAACTAGTACCCC 57.050 47.619 0.00 0.00 36.07 4.95
4241 5788 2.564504 ACAGTCGAAAACTAGTACCCCC 59.435 50.000 0.00 0.00 36.07 5.40
4242 5789 2.830321 CAGTCGAAAACTAGTACCCCCT 59.170 50.000 0.00 0.00 36.07 4.79
4243 5790 3.095332 AGTCGAAAACTAGTACCCCCTC 58.905 50.000 0.00 0.00 36.07 4.30
4244 5791 2.167281 GTCGAAAACTAGTACCCCCTCC 59.833 54.545 0.00 0.00 0.00 4.30
4245 5792 2.181975 CGAAAACTAGTACCCCCTCCA 58.818 52.381 0.00 0.00 0.00 3.86
4246 5793 2.770232 CGAAAACTAGTACCCCCTCCAT 59.230 50.000 0.00 0.00 0.00 3.41
4247 5794 3.199289 CGAAAACTAGTACCCCCTCCATT 59.801 47.826 0.00 0.00 0.00 3.16
4248 5795 4.682589 CGAAAACTAGTACCCCCTCCATTC 60.683 50.000 0.00 0.00 0.00 2.67
4249 5796 3.502051 AACTAGTACCCCCTCCATTCA 57.498 47.619 0.00 0.00 0.00 2.57
4250 5797 2.760581 ACTAGTACCCCCTCCATTCAC 58.239 52.381 0.00 0.00 0.00 3.18
4251 5798 2.318207 ACTAGTACCCCCTCCATTCACT 59.682 50.000 0.00 0.00 0.00 3.41
4252 5799 2.361085 AGTACCCCCTCCATTCACTT 57.639 50.000 0.00 0.00 0.00 3.16
4253 5800 2.644151 AGTACCCCCTCCATTCACTTT 58.356 47.619 0.00 0.00 0.00 2.66
4254 5801 2.993863 AGTACCCCCTCCATTCACTTTT 59.006 45.455 0.00 0.00 0.00 2.27
4255 5802 2.309136 ACCCCCTCCATTCACTTTTG 57.691 50.000 0.00 0.00 0.00 2.44
4256 5803 1.503347 ACCCCCTCCATTCACTTTTGT 59.497 47.619 0.00 0.00 0.00 2.83
4257 5804 2.719705 ACCCCCTCCATTCACTTTTGTA 59.280 45.455 0.00 0.00 0.00 2.41
4258 5805 3.141272 ACCCCCTCCATTCACTTTTGTAA 59.859 43.478 0.00 0.00 0.00 2.41
4259 5806 3.763897 CCCCCTCCATTCACTTTTGTAAG 59.236 47.826 0.00 0.00 37.40 2.34
4260 5807 4.407365 CCCCTCCATTCACTTTTGTAAGT 58.593 43.478 0.00 0.00 45.40 2.24
4261 5808 4.459337 CCCCTCCATTCACTTTTGTAAGTC 59.541 45.833 0.00 0.00 42.67 3.01
4262 5809 4.154195 CCCTCCATTCACTTTTGTAAGTCG 59.846 45.833 0.00 0.00 42.67 4.18
4263 5810 4.755123 CCTCCATTCACTTTTGTAAGTCGT 59.245 41.667 0.00 0.00 42.67 4.34
4264 5811 5.238650 CCTCCATTCACTTTTGTAAGTCGTT 59.761 40.000 0.00 0.00 42.67 3.85
4265 5812 6.238648 CCTCCATTCACTTTTGTAAGTCGTTT 60.239 38.462 0.00 0.00 42.67 3.60
4266 5813 6.721321 TCCATTCACTTTTGTAAGTCGTTTC 58.279 36.000 0.00 0.00 42.67 2.78
4267 5814 6.316640 TCCATTCACTTTTGTAAGTCGTTTCA 59.683 34.615 0.00 0.00 42.67 2.69
4268 5815 6.632834 CCATTCACTTTTGTAAGTCGTTTCAG 59.367 38.462 0.00 0.00 42.67 3.02
4269 5816 6.971527 TTCACTTTTGTAAGTCGTTTCAGA 57.028 33.333 0.00 0.00 42.67 3.27
4270 5817 6.340537 TCACTTTTGTAAGTCGTTTCAGAC 57.659 37.500 0.00 0.00 42.67 3.51
4271 5818 5.870433 TCACTTTTGTAAGTCGTTTCAGACA 59.130 36.000 0.00 0.00 42.67 3.41
4272 5819 6.369340 TCACTTTTGTAAGTCGTTTCAGACAA 59.631 34.615 0.00 0.00 42.67 3.18
4273 5820 6.464834 CACTTTTGTAAGTCGTTTCAGACAAC 59.535 38.462 0.00 0.00 42.67 3.32
4274 5821 6.370718 ACTTTTGTAAGTCGTTTCAGACAACT 59.629 34.615 0.00 0.00 40.60 3.16
4275 5822 5.961395 TTGTAAGTCGTTTCAGACAACTC 57.039 39.130 0.00 0.00 43.24 3.01
4276 5823 5.001237 TGTAAGTCGTTTCAGACAACTCA 57.999 39.130 0.00 0.00 43.24 3.41
4277 5824 5.412640 TGTAAGTCGTTTCAGACAACTCAA 58.587 37.500 0.00 0.00 43.24 3.02
4278 5825 5.870433 TGTAAGTCGTTTCAGACAACTCAAA 59.130 36.000 0.00 0.00 43.24 2.69
4279 5826 5.873179 AAGTCGTTTCAGACAACTCAAAA 57.127 34.783 0.00 0.00 43.24 2.44
4280 5827 6.436843 AAGTCGTTTCAGACAACTCAAAAT 57.563 33.333 0.00 0.00 43.24 1.82
4281 5828 7.548196 AAGTCGTTTCAGACAACTCAAAATA 57.452 32.000 0.00 0.00 43.24 1.40
4282 5829 7.178712 AGTCGTTTCAGACAACTCAAAATAG 57.821 36.000 0.00 0.00 43.24 1.73
4283 5830 6.202954 AGTCGTTTCAGACAACTCAAAATAGG 59.797 38.462 0.00 0.00 43.24 2.57
4284 5831 5.049680 TCGTTTCAGACAACTCAAAATAGGC 60.050 40.000 0.00 0.00 0.00 3.93
4285 5832 5.049405 CGTTTCAGACAACTCAAAATAGGCT 60.049 40.000 0.00 0.00 0.00 4.58
4286 5833 5.947228 TTCAGACAACTCAAAATAGGCTG 57.053 39.130 0.00 0.00 0.00 4.85
4287 5834 4.973168 TCAGACAACTCAAAATAGGCTGT 58.027 39.130 0.00 0.00 0.00 4.40
4288 5835 5.376625 TCAGACAACTCAAAATAGGCTGTT 58.623 37.500 0.00 0.00 0.00 3.16
4289 5836 5.827797 TCAGACAACTCAAAATAGGCTGTTT 59.172 36.000 3.12 3.12 0.00 2.83
4290 5837 6.321181 TCAGACAACTCAAAATAGGCTGTTTT 59.679 34.615 15.20 15.20 0.00 2.43
4291 5838 6.418819 CAGACAACTCAAAATAGGCTGTTTTG 59.581 38.462 31.63 31.63 44.10 2.44
4292 5839 5.049828 ACAACTCAAAATAGGCTGTTTTGC 58.950 37.500 32.24 0.00 43.04 3.68
4293 5840 4.935352 ACTCAAAATAGGCTGTTTTGCA 57.065 36.364 32.24 23.09 43.04 4.08
4294 5841 5.473066 ACTCAAAATAGGCTGTTTTGCAT 57.527 34.783 32.24 23.33 43.04 3.96
4295 5842 6.588719 ACTCAAAATAGGCTGTTTTGCATA 57.411 33.333 32.24 20.43 43.04 3.14
4296 5843 7.174107 ACTCAAAATAGGCTGTTTTGCATAT 57.826 32.000 32.24 19.64 43.04 1.78
4298 5845 7.546667 ACTCAAAATAGGCTGTTTTGCATATTG 59.453 33.333 32.24 21.86 45.29 1.90
4299 5846 7.385267 TCAAAATAGGCTGTTTTGCATATTGT 58.615 30.769 32.24 5.49 45.29 2.71
4300 5847 7.545265 TCAAAATAGGCTGTTTTGCATATTGTC 59.455 33.333 32.24 0.00 45.29 3.18
4301 5848 6.780457 AATAGGCTGTTTTGCATATTGTCT 57.220 33.333 0.00 0.00 44.65 3.41
4302 5849 4.445452 AGGCTGTTTTGCATATTGTCTG 57.555 40.909 0.00 0.00 34.04 3.51
4303 5850 4.081406 AGGCTGTTTTGCATATTGTCTGA 58.919 39.130 0.00 0.00 34.04 3.27
4304 5851 4.523943 AGGCTGTTTTGCATATTGTCTGAA 59.476 37.500 0.00 0.00 34.04 3.02
4305 5852 5.010922 AGGCTGTTTTGCATATTGTCTGAAA 59.989 36.000 0.00 0.00 34.04 2.69
4306 5853 5.870978 GGCTGTTTTGCATATTGTCTGAAAT 59.129 36.000 0.00 0.00 34.04 2.17
4307 5854 6.183360 GGCTGTTTTGCATATTGTCTGAAATG 60.183 38.462 0.00 0.00 34.04 2.32
4308 5855 6.366877 GCTGTTTTGCATATTGTCTGAAATGT 59.633 34.615 0.00 0.00 0.00 2.71
4309 5856 7.411157 GCTGTTTTGCATATTGTCTGAAATGTC 60.411 37.037 0.00 0.00 0.00 3.06
4310 5857 7.660112 TGTTTTGCATATTGTCTGAAATGTCT 58.340 30.769 0.00 0.00 0.00 3.41
4311 5858 8.143193 TGTTTTGCATATTGTCTGAAATGTCTT 58.857 29.630 0.00 0.00 0.00 3.01
4312 5859 8.642020 GTTTTGCATATTGTCTGAAATGTCTTC 58.358 33.333 0.00 0.00 0.00 2.87
4313 5860 7.451501 TTGCATATTGTCTGAAATGTCTTCA 57.548 32.000 0.00 0.00 0.00 3.02
4314 5861 7.451501 TGCATATTGTCTGAAATGTCTTCAA 57.548 32.000 0.00 0.00 0.00 2.69
4315 5862 7.532571 TGCATATTGTCTGAAATGTCTTCAAG 58.467 34.615 0.00 0.00 0.00 3.02
4316 5863 7.391275 TGCATATTGTCTGAAATGTCTTCAAGA 59.609 33.333 0.00 0.00 0.00 3.02
4317 5864 8.404000 GCATATTGTCTGAAATGTCTTCAAGAT 58.596 33.333 0.00 0.00 0.00 2.40
4318 5865 9.932699 CATATTGTCTGAAATGTCTTCAAGATC 57.067 33.333 0.00 0.00 0.00 2.75
4319 5866 9.902684 ATATTGTCTGAAATGTCTTCAAGATCT 57.097 29.630 0.00 0.00 0.00 2.75
4320 5867 8.632906 ATTGTCTGAAATGTCTTCAAGATCTT 57.367 30.769 0.88 0.88 0.00 2.40
4321 5868 9.730705 ATTGTCTGAAATGTCTTCAAGATCTTA 57.269 29.630 7.86 0.00 0.00 2.10
4322 5869 9.730705 TTGTCTGAAATGTCTTCAAGATCTTAT 57.269 29.630 7.86 0.00 0.00 1.73
4337 5884 9.658799 TCAAGATCTTATAAAAGTGAACAGAGG 57.341 33.333 7.86 0.00 34.13 3.69
4338 5885 8.887717 CAAGATCTTATAAAAGTGAACAGAGGG 58.112 37.037 7.86 0.00 34.13 4.30
4384 6022 4.054671 GACCATACTATGCTTGTCTCTGC 58.945 47.826 0.00 0.00 0.00 4.26
4415 6059 2.941064 TCTACATACGAGAACTCACGGG 59.059 50.000 0.00 0.00 34.31 5.28
4490 6134 3.603857 CGCCTTCTTACTTTTGTGTGACG 60.604 47.826 0.00 0.00 0.00 4.35
4513 6157 6.212993 ACGGGGAATAAGTCTTATTATCCCTC 59.787 42.308 30.17 21.62 41.80 4.30
4522 6166 5.726793 AGTCTTATTATCCCTCCACACAACT 59.273 40.000 0.00 0.00 0.00 3.16
4553 6236 7.812648 TCAGTACATGCATACAAAAAGGTTAC 58.187 34.615 0.00 0.00 0.00 2.50
4625 6308 1.229975 TGACGGAGAAGTGCGACGTA 61.230 55.000 0.00 0.00 40.58 3.57
4628 6311 1.063174 ACGGAGAAGTGCGACGTATAC 59.937 52.381 0.00 0.00 40.58 1.47
4643 6326 4.243270 ACGTATACAGTTTTGGAGTGCTC 58.757 43.478 3.32 0.00 31.51 4.26
4679 6362 4.857251 GGACATCATCCGGGTGAC 57.143 61.111 22.34 7.50 37.88 3.67
4711 6400 2.575694 CTCTCGTCCATGGACAAGAG 57.424 55.000 36.67 36.67 45.85 2.85
4836 6525 1.374947 CCTGACCCATCACACCGTT 59.625 57.895 0.00 0.00 0.00 4.44
4841 6530 1.005512 CCCATCACACCGTTCGACA 60.006 57.895 0.00 0.00 0.00 4.35
4869 6558 4.612932 GATGCAATCAAGGTGTTCTCTC 57.387 45.455 0.00 0.00 44.70 3.20
4921 6613 1.404717 GCACACTGACATCGTCATCCT 60.405 52.381 0.00 0.00 41.94 3.24
4959 6654 4.829064 TGTTCTTAGCACATTGGTGTTC 57.171 40.909 0.00 0.00 46.95 3.18
4963 6658 5.235850 TCTTAGCACATTGGTGTTCCTTA 57.764 39.130 0.00 0.00 46.95 2.69
4964 6659 5.815581 TCTTAGCACATTGGTGTTCCTTAT 58.184 37.500 0.00 0.00 46.95 1.73
4984 6679 6.127535 CCTTATGTTGCACCTTTTGATCAGAT 60.128 38.462 0.00 0.00 0.00 2.90
5043 6738 6.657541 TGGCTTTACCCTAAAAGATTGTACAG 59.342 38.462 0.00 0.00 38.50 2.74
5049 6744 9.933723 TTACCCTAAAAGATTGTACAGTAAGAC 57.066 33.333 0.00 0.00 0.00 3.01
5052 6747 9.804758 CCCTAAAAGATTGTACAGTAAGACTAG 57.195 37.037 0.00 0.00 0.00 2.57
5075 6772 7.989416 AGTATACTAAGCTGATCAGTCCTAC 57.011 40.000 23.38 14.26 0.00 3.18
5076 6773 7.751646 AGTATACTAAGCTGATCAGTCCTACT 58.248 38.462 23.38 15.88 0.00 2.57
5077 6774 7.881232 AGTATACTAAGCTGATCAGTCCTACTC 59.119 40.741 23.38 5.42 0.00 2.59
5078 6775 4.211920 ACTAAGCTGATCAGTCCTACTCC 58.788 47.826 23.38 4.70 0.00 3.85
5079 6776 2.080654 AGCTGATCAGTCCTACTCCC 57.919 55.000 23.38 3.99 0.00 4.30
5080 6777 1.573376 AGCTGATCAGTCCTACTCCCT 59.427 52.381 23.38 6.26 0.00 4.20
5081 6778 1.960689 GCTGATCAGTCCTACTCCCTC 59.039 57.143 23.38 0.00 0.00 4.30
5082 6779 2.593026 CTGATCAGTCCTACTCCCTCC 58.407 57.143 14.95 0.00 0.00 4.30
5083 6780 1.133761 TGATCAGTCCTACTCCCTCCG 60.134 57.143 0.00 0.00 0.00 4.63
5084 6781 0.927767 ATCAGTCCTACTCCCTCCGT 59.072 55.000 0.00 0.00 0.00 4.69
5085 6782 0.702902 TCAGTCCTACTCCCTCCGTT 59.297 55.000 0.00 0.00 0.00 4.44
5086 6783 1.104630 CAGTCCTACTCCCTCCGTTC 58.895 60.000 0.00 0.00 0.00 3.95
5087 6784 0.394080 AGTCCTACTCCCTCCGTTCG 60.394 60.000 0.00 0.00 0.00 3.95
5088 6785 1.077212 TCCTACTCCCTCCGTTCGG 60.077 63.158 4.74 4.74 0.00 4.30
5089 6786 1.077212 CCTACTCCCTCCGTTCGGA 60.077 63.158 13.34 13.34 0.00 4.55
5090 6787 0.682209 CCTACTCCCTCCGTTCGGAA 60.682 60.000 14.79 0.04 33.41 4.30
5091 6788 1.400737 CTACTCCCTCCGTTCGGAAT 58.599 55.000 14.79 2.09 33.41 3.01
5092 6789 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
5093 6790 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5094 6791 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5095 6792 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5096 6793 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5097 6794 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5098 6795 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5099 6796 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5100 6797 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
5101 6798 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
5102 6799 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
5103 6800 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
5104 6801 3.916172 CGTTCGGAATTACTTGTCTCGAA 59.084 43.478 0.00 0.00 33.66 3.71
5105 6802 4.561606 CGTTCGGAATTACTTGTCTCGAAT 59.438 41.667 0.00 0.00 37.46 3.34
5106 6803 5.740569 CGTTCGGAATTACTTGTCTCGAATA 59.259 40.000 0.00 0.00 37.46 1.75
5107 6804 6.417044 CGTTCGGAATTACTTGTCTCGAATAT 59.583 38.462 0.00 0.00 37.46 1.28
5108 6805 7.556433 GTTCGGAATTACTTGTCTCGAATATG 58.444 38.462 0.00 0.00 37.46 1.78
5109 6806 6.213677 TCGGAATTACTTGTCTCGAATATGG 58.786 40.000 0.00 0.00 0.00 2.74
5110 6807 5.405571 CGGAATTACTTGTCTCGAATATGGG 59.594 44.000 0.00 0.00 0.00 4.00
5111 6808 6.289064 GGAATTACTTGTCTCGAATATGGGT 58.711 40.000 0.00 0.00 0.00 4.51
5112 6809 6.202954 GGAATTACTTGTCTCGAATATGGGTG 59.797 42.308 0.00 0.00 0.00 4.61
5113 6810 5.670792 TTACTTGTCTCGAATATGGGTGT 57.329 39.130 0.00 0.00 0.00 4.16
5114 6811 6.778834 TTACTTGTCTCGAATATGGGTGTA 57.221 37.500 0.00 0.00 0.00 2.90
5115 6812 5.871396 ACTTGTCTCGAATATGGGTGTAT 57.129 39.130 0.00 0.00 0.00 2.29
5116 6813 5.844004 ACTTGTCTCGAATATGGGTGTATC 58.156 41.667 0.00 0.00 0.00 2.24
5117 6814 5.598830 ACTTGTCTCGAATATGGGTGTATCT 59.401 40.000 0.00 0.00 0.00 1.98
5118 6815 6.776116 ACTTGTCTCGAATATGGGTGTATCTA 59.224 38.462 0.00 0.00 0.00 1.98
5119 6816 6.819397 TGTCTCGAATATGGGTGTATCTAG 57.181 41.667 0.00 0.00 0.00 2.43
5120 6817 6.540083 TGTCTCGAATATGGGTGTATCTAGA 58.460 40.000 0.00 0.00 0.00 2.43
5121 6818 7.002276 TGTCTCGAATATGGGTGTATCTAGAA 58.998 38.462 0.00 0.00 0.00 2.10
5122 6819 7.040617 TGTCTCGAATATGGGTGTATCTAGAAC 60.041 40.741 0.00 0.00 0.00 3.01
5123 6820 7.175293 GTCTCGAATATGGGTGTATCTAGAACT 59.825 40.741 0.00 0.00 0.00 3.01
5124 6821 8.380867 TCTCGAATATGGGTGTATCTAGAACTA 58.619 37.037 0.00 0.00 0.00 2.24
5125 6822 8.929260 TCGAATATGGGTGTATCTAGAACTAA 57.071 34.615 0.00 0.00 0.00 2.24
5126 6823 9.358406 TCGAATATGGGTGTATCTAGAACTAAA 57.642 33.333 0.00 0.00 0.00 1.85
5127 6824 9.976511 CGAATATGGGTGTATCTAGAACTAAAA 57.023 33.333 0.00 0.00 0.00 1.52
5132 6829 8.297470 TGGGTGTATCTAGAACTAAAATACGT 57.703 34.615 0.00 0.00 0.00 3.57
5133 6830 8.408601 TGGGTGTATCTAGAACTAAAATACGTC 58.591 37.037 0.00 0.00 0.00 4.34
5134 6831 8.628280 GGGTGTATCTAGAACTAAAATACGTCT 58.372 37.037 0.00 0.00 0.00 4.18
5141 6838 9.117183 TCTAGAACTAAAATACGTCTAGATGCA 57.883 33.333 12.04 0.00 32.48 3.96
5142 6839 9.900710 CTAGAACTAAAATACGTCTAGATGCAT 57.099 33.333 12.04 0.00 0.00 3.96
5143 6840 8.804688 AGAACTAAAATACGTCTAGATGCATC 57.195 34.615 19.37 19.37 0.00 3.91
5144 6841 7.868415 AGAACTAAAATACGTCTAGATGCATCC 59.132 37.037 23.06 6.84 0.00 3.51
5145 6842 7.050970 ACTAAAATACGTCTAGATGCATCCA 57.949 36.000 23.06 9.05 0.00 3.41
5146 6843 7.671302 ACTAAAATACGTCTAGATGCATCCAT 58.329 34.615 23.06 8.39 0.00 3.41
5147 6844 8.150945 ACTAAAATACGTCTAGATGCATCCATT 58.849 33.333 23.06 7.62 0.00 3.16
5148 6845 7.807977 AAAATACGTCTAGATGCATCCATTT 57.192 32.000 23.06 13.11 0.00 2.32
5149 6846 7.426929 AAATACGTCTAGATGCATCCATTTC 57.573 36.000 23.06 9.30 0.00 2.17
5150 6847 4.679373 ACGTCTAGATGCATCCATTTCT 57.321 40.909 23.06 6.79 0.00 2.52
5151 6848 4.375272 ACGTCTAGATGCATCCATTTCTG 58.625 43.478 23.06 9.78 0.00 3.02
5152 6849 3.186001 CGTCTAGATGCATCCATTTCTGC 59.814 47.826 23.06 5.10 38.87 4.26
5153 6850 3.186001 GTCTAGATGCATCCATTTCTGCG 59.814 47.826 23.06 0.92 41.32 5.18
5154 6851 2.336945 AGATGCATCCATTTCTGCGA 57.663 45.000 23.06 0.00 41.32 5.10
5155 6852 1.945394 AGATGCATCCATTTCTGCGAC 59.055 47.619 23.06 0.00 41.32 5.19
5156 6853 1.672363 GATGCATCCATTTCTGCGACA 59.328 47.619 16.23 0.00 41.32 4.35
5157 6854 1.532523 TGCATCCATTTCTGCGACAA 58.467 45.000 0.00 0.00 41.32 3.18
5158 6855 1.469703 TGCATCCATTTCTGCGACAAG 59.530 47.619 0.00 0.00 41.32 3.16
5159 6856 1.470098 GCATCCATTTCTGCGACAAGT 59.530 47.619 0.00 0.00 0.00 3.16
5160 6857 2.677836 GCATCCATTTCTGCGACAAGTA 59.322 45.455 0.00 0.00 0.00 2.24
5161 6858 3.126858 GCATCCATTTCTGCGACAAGTAA 59.873 43.478 0.00 0.00 0.00 2.24
5162 6859 4.201950 GCATCCATTTCTGCGACAAGTAAT 60.202 41.667 0.00 0.00 0.00 1.89
5163 6860 5.677091 GCATCCATTTCTGCGACAAGTAATT 60.677 40.000 0.00 0.00 0.00 1.40
5164 6861 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
5165 6862 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
5166 6863 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
5167 6864 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
5168 6865 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
5169 6866 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
5170 6867 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
5171 6868 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
5172 6869 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
5173 6870 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
5174 6871 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5175 6872 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5176 6873 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5177 6874 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5178 6875 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
5179 6876 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
5189 6886 0.618981 GGAGGGAGTAGTTGGTTGGG 59.381 60.000 0.00 0.00 0.00 4.12
5245 6942 5.049405 TGCAGAGAAACTTTTTGCTACTAGC 60.049 40.000 0.61 0.61 42.82 3.42
5290 6998 8.520835 TTTATATAGCTGACTCGTGCTATTTG 57.479 34.615 16.56 0.00 46.55 2.32
5340 7048 6.560003 TTGCATCCTCTATTGGAAGAACTA 57.440 37.500 0.00 0.00 39.85 2.24
5341 7049 6.166984 TGCATCCTCTATTGGAAGAACTAG 57.833 41.667 0.00 0.00 39.85 2.57
5347 7055 3.967987 TCTATTGGAAGAACTAGGAGCCC 59.032 47.826 0.00 0.00 0.00 5.19
5394 7102 2.550830 ATATCTTCACCGTCATGGCC 57.449 50.000 0.00 0.00 43.94 5.36
5395 7103 1.496060 TATCTTCACCGTCATGGCCT 58.504 50.000 3.32 0.00 43.94 5.19
5396 7104 1.496060 ATCTTCACCGTCATGGCCTA 58.504 50.000 3.32 0.00 43.94 3.93
5397 7105 0.824109 TCTTCACCGTCATGGCCTAG 59.176 55.000 3.32 0.00 43.94 3.02
5398 7106 0.179073 CTTCACCGTCATGGCCTAGG 60.179 60.000 3.67 3.67 43.94 3.02
5399 7107 2.203070 CACCGTCATGGCCTAGGC 60.203 66.667 26.55 26.55 43.94 3.93
5413 7121 1.004277 CCTAGGCCTACTTTGTTGCCA 59.996 52.381 8.91 0.00 46.45 4.92
5415 7123 0.771127 AGGCCTACTTTGTTGCCAGA 59.229 50.000 1.29 0.00 46.45 3.86
5462 7170 4.924305 AATGCTCATTATGAAATGGCGT 57.076 36.364 0.00 0.00 42.40 5.68
5466 7174 4.065088 GCTCATTATGAAATGGCGTCCTA 58.935 43.478 0.00 0.00 42.40 2.94
5472 7180 1.066430 TGAAATGGCGTCCTACTGGTC 60.066 52.381 0.00 0.00 34.23 4.02
5473 7181 0.981183 AAATGGCGTCCTACTGGTCA 59.019 50.000 0.00 0.00 34.23 4.02
5496 7205 8.825745 GTCATTTCTTCTAGTGGAATTCAGATC 58.174 37.037 7.93 0.00 33.01 2.75
5509 7222 8.138712 GTGGAATTCAGATCGACTTAATCTAGT 58.861 37.037 7.93 0.00 32.24 2.57
5532 7245 2.161410 TGCAAATTGCTACAGGTAAGCG 59.839 45.455 19.34 0.00 45.31 4.68
5557 7270 7.148255 CGATTGGAATTTGATTGTTCAGGTAGA 60.148 37.037 0.00 0.00 32.27 2.59
5558 7271 8.599624 ATTGGAATTTGATTGTTCAGGTAGAT 57.400 30.769 0.00 0.00 32.27 1.98
5575 7288 5.415221 GGTAGATATTGATCTGCTACCAGC 58.585 45.833 17.33 0.00 46.47 4.85
5576 7289 4.550076 AGATATTGATCTGCTACCAGCC 57.450 45.455 0.00 0.00 41.12 4.85
5577 7290 4.166539 AGATATTGATCTGCTACCAGCCT 58.833 43.478 0.00 0.00 41.12 4.58
5578 7291 5.336945 AGATATTGATCTGCTACCAGCCTA 58.663 41.667 0.00 0.00 41.12 3.93
5579 7292 3.760580 ATTGATCTGCTACCAGCCTAC 57.239 47.619 0.00 0.00 41.51 3.18
5580 7293 1.414158 TGATCTGCTACCAGCCTACC 58.586 55.000 0.00 0.00 41.51 3.18
5581 7294 1.342975 TGATCTGCTACCAGCCTACCA 60.343 52.381 0.00 0.00 41.51 3.25
5638 7351 6.983307 ACACTTTTAGCAATTTAACATGTGCA 59.017 30.769 0.00 0.00 39.50 4.57
5648 7361 7.254387 GCAATTTAACATGTGCAAGTTTTCAGA 60.254 33.333 0.00 0.00 36.97 3.27
5656 7369 6.449635 TGTGCAAGTTTTCAGATTTACACT 57.550 33.333 0.00 0.00 0.00 3.55
5684 7397 0.824109 TCACATTAGGGCGTCTCCAG 59.176 55.000 0.00 0.00 36.21 3.86
5689 7402 2.154567 TTAGGGCGTCTCCAGTGTAT 57.845 50.000 0.00 0.00 36.21 2.29
5749 7466 4.902443 TTACACATGAGGAGATCGACTC 57.098 45.455 0.00 11.39 44.24 3.36
5755 7472 2.577700 TGAGGAGATCGACTCTAAGGC 58.422 52.381 16.97 0.00 44.37 4.35
5756 7473 2.092375 TGAGGAGATCGACTCTAAGGCA 60.092 50.000 16.97 0.00 44.37 4.75
5787 7505 1.024271 CAATGTGGGCATAAGGTCGG 58.976 55.000 0.00 0.00 34.39 4.79
5833 7551 2.076863 AGGCGACTTTAGACATTGTGC 58.923 47.619 0.00 0.00 37.44 4.57
5850 7568 0.886043 TGCGCACAAGAATCAGCAGT 60.886 50.000 5.66 0.00 0.00 4.40
5860 7578 4.760530 AGAATCAGCAGTGCCTATAACA 57.239 40.909 12.58 0.00 0.00 2.41
5871 7589 5.046663 CAGTGCCTATAACAACCCCAAAAAT 60.047 40.000 0.00 0.00 0.00 1.82
5915 7633 5.930209 ATACACCCCATCTGGAAACATAT 57.070 39.130 0.00 0.00 41.51 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 1179 6.753897 TCGATGATTAATCAGAACATGACG 57.246 37.500 21.97 15.36 41.91 4.35
42 1199 1.450848 ACGTCGCCCTACTCATCGA 60.451 57.895 0.00 0.00 0.00 3.59
51 1208 1.904865 TTACTGGTCACGTCGCCCT 60.905 57.895 0.00 0.00 0.00 5.19
191 1397 2.872858 GACGCTGGTGAAGAAGAAAAGT 59.127 45.455 0.00 0.00 0.00 2.66
210 1416 1.300697 ACCGCCGTCTTCACTTGAC 60.301 57.895 0.00 0.00 0.00 3.18
342 1560 4.098654 AGCTACATGTAGTCTGTGATGTCC 59.901 45.833 28.95 11.46 35.65 4.02
432 1655 2.202518 CGCAAGCGGCAGAATTGG 60.203 61.111 6.55 0.00 45.17 3.16
453 1676 6.449698 ACTTTTCTGACTCGATTAAACGGTA 58.550 36.000 5.24 0.00 0.00 4.02
467 1690 2.561858 ACGGAGGGAGTACTTTTCTGAC 59.438 50.000 14.37 0.00 0.00 3.51
474 1697 0.038744 TTCGGACGGAGGGAGTACTT 59.961 55.000 0.00 0.00 0.00 2.24
475 1698 0.038744 TTTCGGACGGAGGGAGTACT 59.961 55.000 0.00 0.00 0.00 2.73
476 1699 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
477 1700 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
478 1701 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
479 1702 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
480 1703 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
481 1704 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
482 1705 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
483 1706 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
484 1707 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
485 1708 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
486 1709 0.941542 TGGACAAGCTTTTTCGGACG 59.058 50.000 0.00 0.00 0.00 4.79
487 1710 2.552315 TGATGGACAAGCTTTTTCGGAC 59.448 45.455 0.00 0.00 0.00 4.79
488 1711 2.857483 TGATGGACAAGCTTTTTCGGA 58.143 42.857 0.00 0.00 0.00 4.55
489 1712 3.641437 TTGATGGACAAGCTTTTTCGG 57.359 42.857 0.00 0.00 34.20 4.30
490 1713 5.505165 CATTTGATGGACAAGCTTTTTCG 57.495 39.130 0.00 0.00 39.77 3.46
505 1728 6.191657 TGGTGCTAGATACATCCATTTGAT 57.808 37.500 0.00 0.00 0.00 2.57
506 1729 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
507 1730 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
508 1731 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
509 1732 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
510 1733 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
511 1734 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
512 1735 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
524 1747 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
525 1748 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
526 1749 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
527 1750 8.668510 AAATGGATGTATCTAGCACTAACTTG 57.331 34.615 0.00 0.00 0.00 3.16
529 1752 9.988815 CTTAAATGGATGTATCTAGCACTAACT 57.011 33.333 0.00 0.00 0.00 2.24
530 1753 9.982651 TCTTAAATGGATGTATCTAGCACTAAC 57.017 33.333 0.00 0.00 0.00 2.34
533 1756 9.331282 GTTTCTTAAATGGATGTATCTAGCACT 57.669 33.333 0.00 0.00 0.00 4.40
534 1757 9.109393 TGTTTCTTAAATGGATGTATCTAGCAC 57.891 33.333 0.00 0.00 0.00 4.40
535 1758 9.679661 TTGTTTCTTAAATGGATGTATCTAGCA 57.320 29.630 0.00 0.00 0.00 3.49
538 1761 9.905713 AGCTTGTTTCTTAAATGGATGTATCTA 57.094 29.630 0.00 0.00 0.00 1.98
539 1762 8.814038 AGCTTGTTTCTTAAATGGATGTATCT 57.186 30.769 0.00 0.00 0.00 1.98
540 1763 9.294030 CAAGCTTGTTTCTTAAATGGATGTATC 57.706 33.333 18.65 0.00 0.00 2.24
541 1764 8.253113 CCAAGCTTGTTTCTTAAATGGATGTAT 58.747 33.333 24.35 0.00 0.00 2.29
542 1765 7.309744 CCCAAGCTTGTTTCTTAAATGGATGTA 60.310 37.037 24.35 0.00 0.00 2.29
543 1766 6.458210 CCAAGCTTGTTTCTTAAATGGATGT 58.542 36.000 24.35 0.00 0.00 3.06
544 1767 5.870978 CCCAAGCTTGTTTCTTAAATGGATG 59.129 40.000 24.35 3.72 0.00 3.51
545 1768 5.779771 TCCCAAGCTTGTTTCTTAAATGGAT 59.220 36.000 24.35 0.00 0.00 3.41
546 1769 5.010617 GTCCCAAGCTTGTTTCTTAAATGGA 59.989 40.000 24.35 15.96 0.00 3.41
547 1770 5.221422 TGTCCCAAGCTTGTTTCTTAAATGG 60.221 40.000 24.35 14.01 0.00 3.16
548 1771 5.841810 TGTCCCAAGCTTGTTTCTTAAATG 58.158 37.500 24.35 5.47 0.00 2.32
549 1772 6.478512 TTGTCCCAAGCTTGTTTCTTAAAT 57.521 33.333 24.35 0.00 0.00 1.40
550 1773 5.681179 GCTTGTCCCAAGCTTGTTTCTTAAA 60.681 40.000 24.35 8.82 40.01 1.52
551 1774 4.202111 GCTTGTCCCAAGCTTGTTTCTTAA 60.202 41.667 24.35 10.79 40.01 1.85
552 1775 3.317993 GCTTGTCCCAAGCTTGTTTCTTA 59.682 43.478 24.35 5.17 40.01 2.10
553 1776 2.101415 GCTTGTCCCAAGCTTGTTTCTT 59.899 45.455 24.35 0.00 40.01 2.52
554 1777 1.683385 GCTTGTCCCAAGCTTGTTTCT 59.317 47.619 24.35 0.00 40.01 2.52
555 1778 2.140065 GCTTGTCCCAAGCTTGTTTC 57.860 50.000 24.35 13.85 40.01 2.78
562 1785 0.600057 CCAGAAAGCTTGTCCCAAGC 59.400 55.000 18.69 18.69 43.31 4.01
563 1786 1.202927 TCCCAGAAAGCTTGTCCCAAG 60.203 52.381 0.00 0.00 0.00 3.61
564 1787 0.850100 TCCCAGAAAGCTTGTCCCAA 59.150 50.000 0.00 0.00 0.00 4.12
565 1788 0.110486 GTCCCAGAAAGCTTGTCCCA 59.890 55.000 0.00 0.00 0.00 4.37
566 1789 0.955919 CGTCCCAGAAAGCTTGTCCC 60.956 60.000 0.00 0.00 0.00 4.46
567 1790 0.955919 CCGTCCCAGAAAGCTTGTCC 60.956 60.000 0.00 0.00 0.00 4.02
568 1791 0.034896 TCCGTCCCAGAAAGCTTGTC 59.965 55.000 0.00 0.00 0.00 3.18
569 1792 0.035458 CTCCGTCCCAGAAAGCTTGT 59.965 55.000 0.00 0.00 0.00 3.16
570 1793 0.674895 CCTCCGTCCCAGAAAGCTTG 60.675 60.000 0.00 0.00 0.00 4.01
571 1794 1.679898 CCTCCGTCCCAGAAAGCTT 59.320 57.895 0.00 0.00 0.00 3.74
572 1795 2.294078 CCCTCCGTCCCAGAAAGCT 61.294 63.158 0.00 0.00 0.00 3.74
573 1796 2.245438 CTCCCTCCGTCCCAGAAAGC 62.245 65.000 0.00 0.00 0.00 3.51
574 1797 0.905337 ACTCCCTCCGTCCCAGAAAG 60.905 60.000 0.00 0.00 0.00 2.62
575 1798 0.410663 TACTCCCTCCGTCCCAGAAA 59.589 55.000 0.00 0.00 0.00 2.52
576 1799 0.033405 CTACTCCCTCCGTCCCAGAA 60.033 60.000 0.00 0.00 0.00 3.02
577 1800 1.212934 ACTACTCCCTCCGTCCCAGA 61.213 60.000 0.00 0.00 0.00 3.86
578 1801 1.038130 CACTACTCCCTCCGTCCCAG 61.038 65.000 0.00 0.00 0.00 4.45
579 1802 1.000019 CACTACTCCCTCCGTCCCA 60.000 63.158 0.00 0.00 0.00 4.37
580 1803 2.424733 GCACTACTCCCTCCGTCCC 61.425 68.421 0.00 0.00 0.00 4.46
581 1804 2.424733 GGCACTACTCCCTCCGTCC 61.425 68.421 0.00 0.00 0.00 4.79
582 1805 2.772691 CGGCACTACTCCCTCCGTC 61.773 68.421 0.00 0.00 35.75 4.79
583 1806 2.754658 CGGCACTACTCCCTCCGT 60.755 66.667 0.00 0.00 35.75 4.69
584 1807 2.754658 ACGGCACTACTCCCTCCG 60.755 66.667 0.00 0.00 45.04 4.63
585 1808 2.424733 GGACGGCACTACTCCCTCC 61.425 68.421 0.00 0.00 0.00 4.30
586 1809 2.772691 CGGACGGCACTACTCCCTC 61.773 68.421 0.00 0.00 0.00 4.30
587 1810 2.754658 CGGACGGCACTACTCCCT 60.755 66.667 0.00 0.00 0.00 4.20
588 1811 4.509737 GCGGACGGCACTACTCCC 62.510 72.222 0.00 0.00 42.87 4.30
603 1826 0.953471 TTCGGAGGAACACCATTGCG 60.953 55.000 0.00 0.00 39.76 4.85
695 1919 0.244994 GGTGCCACAACACAAACACA 59.755 50.000 0.00 0.00 42.55 3.72
814 2078 3.181475 TGACCCGCTCTCTGATACATTTC 60.181 47.826 0.00 0.00 0.00 2.17
964 2245 0.373024 GATTCTGCTTCTGCGTCTGC 59.627 55.000 0.00 0.00 43.34 4.26
1172 2470 1.615392 GGCAAGGTGCTGAGATGTTTT 59.385 47.619 0.00 0.00 44.28 2.43
1380 2689 1.683707 ATGCAGGAGGAGAGCACGA 60.684 57.895 0.00 0.00 41.60 4.35
1476 2785 3.604875 GGTATTTCACCGGAGACTTGA 57.395 47.619 9.46 0.00 37.63 3.02
1745 3054 7.091720 TGGGAATGGGACCACTTAAGTTATTAT 60.092 37.037 5.07 0.00 0.00 1.28
1749 3058 3.917629 TGGGAATGGGACCACTTAAGTTA 59.082 43.478 5.07 0.00 0.00 2.24
1792 3101 4.392138 GCTTATGTCCAAGTGTTGTAGGTC 59.608 45.833 0.00 0.00 0.00 3.85
1861 3170 3.072211 GGTACAAGGTAGTGAGTTTGGC 58.928 50.000 0.00 0.00 0.00 4.52
1907 3216 3.528597 AACCTAGTTCTCGAGGAATGC 57.471 47.619 13.56 0.00 38.48 3.56
2100 3409 3.728845 ACCTGTTAGTGTGTTGTAGCTG 58.271 45.455 0.00 0.00 0.00 4.24
2201 3654 6.894735 TCACCATATAACCTAGTTCCCAAA 57.105 37.500 0.00 0.00 0.00 3.28
2581 4034 9.755804 TGAACTGATATCAACATAGACAAGATC 57.244 33.333 6.90 0.00 0.00 2.75
2614 4067 7.041167 CCAGCGATGAGATAATTGACCAAATAA 60.041 37.037 0.06 0.00 0.00 1.40
2797 4251 1.677576 CAGGCTCAAGTTGAACAGCAA 59.322 47.619 15.16 0.00 0.00 3.91
2817 4271 2.508300 TCCTTGGAGCAGGTTATTACCC 59.492 50.000 0.00 0.00 46.28 3.69
2988 4449 4.261801 CCAACATTCCTAGTTCGATTGGT 58.738 43.478 0.00 0.00 32.43 3.67
3157 4618 3.327172 ACATCAATGGATAGGAGGCTGAG 59.673 47.826 0.00 0.00 30.87 3.35
3219 4680 4.834496 TGGATTGGAGCTTCTTCAAACAAT 59.166 37.500 0.00 0.00 32.23 2.71
3241 4702 8.600625 CAATTTCTTATTCTGCATGAACCATTG 58.399 33.333 0.00 0.00 37.52 2.82
3397 4864 6.917217 TTTCCTTGTTTTACATTGCAAAGG 57.083 33.333 1.71 2.04 0.00 3.11
3459 4926 2.957402 AGTTCCAGATGGCAAACAGA 57.043 45.000 0.00 0.00 34.44 3.41
4097 5570 8.877808 ATATATAACACTATGCATGACATCGG 57.122 34.615 10.16 0.00 40.38 4.18
4145 5647 6.951971 ACAGTTAGGAAGATCTATGCAACTT 58.048 36.000 0.00 0.00 0.00 2.66
4146 5648 6.552445 ACAGTTAGGAAGATCTATGCAACT 57.448 37.500 0.00 1.37 0.00 3.16
4147 5649 6.258947 GGAACAGTTAGGAAGATCTATGCAAC 59.741 42.308 0.00 0.00 0.00 4.17
4148 5650 6.070251 TGGAACAGTTAGGAAGATCTATGCAA 60.070 38.462 0.00 0.00 0.00 4.08
4149 5651 5.425217 TGGAACAGTTAGGAAGATCTATGCA 59.575 40.000 0.00 0.00 0.00 3.96
4218 5765 4.380973 GGGGGTACTAGTTTTCGACTGTAC 60.381 50.000 0.00 0.00 39.48 2.90
4226 5773 4.226620 TGAATGGAGGGGGTACTAGTTTTC 59.773 45.833 0.00 0.00 0.00 2.29
4233 5780 2.361085 AAGTGAATGGAGGGGGTACT 57.639 50.000 0.00 0.00 0.00 2.73
4234 5781 3.089284 CAAAAGTGAATGGAGGGGGTAC 58.911 50.000 0.00 0.00 0.00 3.34
4235 5782 2.719705 ACAAAAGTGAATGGAGGGGGTA 59.280 45.455 0.00 0.00 0.00 3.69
4236 5783 1.503347 ACAAAAGTGAATGGAGGGGGT 59.497 47.619 0.00 0.00 0.00 4.95
4237 5784 2.309136 ACAAAAGTGAATGGAGGGGG 57.691 50.000 0.00 0.00 0.00 5.40
4238 5785 4.407365 ACTTACAAAAGTGAATGGAGGGG 58.593 43.478 0.00 0.00 44.40 4.79
4239 5786 4.154195 CGACTTACAAAAGTGAATGGAGGG 59.846 45.833 0.00 0.00 46.09 4.30
4240 5787 4.755123 ACGACTTACAAAAGTGAATGGAGG 59.245 41.667 0.00 0.00 46.09 4.30
4241 5788 5.924475 ACGACTTACAAAAGTGAATGGAG 57.076 39.130 0.00 0.00 46.09 3.86
4242 5789 6.316640 TGAAACGACTTACAAAAGTGAATGGA 59.683 34.615 0.00 0.00 46.09 3.41
4243 5790 6.491394 TGAAACGACTTACAAAAGTGAATGG 58.509 36.000 0.00 0.00 46.09 3.16
4244 5791 7.373441 GTCTGAAACGACTTACAAAAGTGAATG 59.627 37.037 0.00 0.00 46.09 2.67
4245 5792 7.065324 TGTCTGAAACGACTTACAAAAGTGAAT 59.935 33.333 0.00 0.00 46.09 2.57
4246 5793 6.369340 TGTCTGAAACGACTTACAAAAGTGAA 59.631 34.615 0.00 0.00 46.09 3.18
4247 5794 5.870433 TGTCTGAAACGACTTACAAAAGTGA 59.130 36.000 0.00 0.00 46.09 3.41
4248 5795 6.102006 TGTCTGAAACGACTTACAAAAGTG 57.898 37.500 0.00 0.00 46.09 3.16
4259 5806 6.363473 CCTATTTTGAGTTGTCTGAAACGAC 58.637 40.000 0.00 0.00 41.93 4.34
4260 5807 5.049680 GCCTATTTTGAGTTGTCTGAAACGA 60.050 40.000 0.00 0.00 35.13 3.85
4261 5808 5.049405 AGCCTATTTTGAGTTGTCTGAAACG 60.049 40.000 0.00 0.00 35.13 3.60
4262 5809 6.145535 CAGCCTATTTTGAGTTGTCTGAAAC 58.854 40.000 0.00 0.00 0.00 2.78
4263 5810 5.827797 ACAGCCTATTTTGAGTTGTCTGAAA 59.172 36.000 0.00 0.00 0.00 2.69
4264 5811 5.376625 ACAGCCTATTTTGAGTTGTCTGAA 58.623 37.500 0.00 0.00 0.00 3.02
4265 5812 4.973168 ACAGCCTATTTTGAGTTGTCTGA 58.027 39.130 0.00 0.00 0.00 3.27
4266 5813 5.695851 AACAGCCTATTTTGAGTTGTCTG 57.304 39.130 0.00 0.00 0.00 3.51
4267 5814 6.507023 CAAAACAGCCTATTTTGAGTTGTCT 58.493 36.000 1.96 0.00 45.75 3.41
4268 5815 5.175673 GCAAAACAGCCTATTTTGAGTTGTC 59.824 40.000 12.19 0.00 45.75 3.18
4269 5816 5.049828 GCAAAACAGCCTATTTTGAGTTGT 58.950 37.500 12.19 0.00 45.75 3.32
4270 5817 5.049167 TGCAAAACAGCCTATTTTGAGTTG 58.951 37.500 12.19 4.12 45.75 3.16
4271 5818 5.275067 TGCAAAACAGCCTATTTTGAGTT 57.725 34.783 12.19 0.00 45.75 3.01
4272 5819 4.935352 TGCAAAACAGCCTATTTTGAGT 57.065 36.364 12.19 0.00 45.75 3.41
4273 5820 7.546667 ACAATATGCAAAACAGCCTATTTTGAG 59.453 33.333 12.19 0.00 45.75 3.02
4274 5821 7.385267 ACAATATGCAAAACAGCCTATTTTGA 58.615 30.769 12.19 0.00 45.75 2.69
4275 5822 7.546667 AGACAATATGCAAAACAGCCTATTTTG 59.453 33.333 3.83 3.83 45.68 2.44
4276 5823 7.546667 CAGACAATATGCAAAACAGCCTATTTT 59.453 33.333 0.00 0.00 34.49 1.82
4277 5824 7.037438 CAGACAATATGCAAAACAGCCTATTT 58.963 34.615 0.00 0.00 34.49 1.40
4278 5825 6.377996 TCAGACAATATGCAAAACAGCCTATT 59.622 34.615 0.00 0.00 36.27 1.73
4279 5826 5.887598 TCAGACAATATGCAAAACAGCCTAT 59.112 36.000 0.00 0.00 0.00 2.57
4280 5827 5.252547 TCAGACAATATGCAAAACAGCCTA 58.747 37.500 0.00 0.00 0.00 3.93
4281 5828 4.081406 TCAGACAATATGCAAAACAGCCT 58.919 39.130 0.00 0.00 0.00 4.58
4282 5829 4.439305 TCAGACAATATGCAAAACAGCC 57.561 40.909 0.00 0.00 0.00 4.85
4283 5830 6.366877 ACATTTCAGACAATATGCAAAACAGC 59.633 34.615 0.00 0.00 0.00 4.40
4284 5831 7.811236 AGACATTTCAGACAATATGCAAAACAG 59.189 33.333 0.00 0.00 0.00 3.16
4285 5832 7.660112 AGACATTTCAGACAATATGCAAAACA 58.340 30.769 0.00 0.00 0.00 2.83
4286 5833 8.524870 AAGACATTTCAGACAATATGCAAAAC 57.475 30.769 0.00 0.00 0.00 2.43
4287 5834 8.358895 TGAAGACATTTCAGACAATATGCAAAA 58.641 29.630 0.00 0.00 0.00 2.44
4288 5835 7.884257 TGAAGACATTTCAGACAATATGCAAA 58.116 30.769 0.00 0.00 0.00 3.68
4289 5836 7.451501 TGAAGACATTTCAGACAATATGCAA 57.548 32.000 0.00 0.00 0.00 4.08
4290 5837 7.391275 TCTTGAAGACATTTCAGACAATATGCA 59.609 33.333 0.00 0.00 0.00 3.96
4291 5838 7.755591 TCTTGAAGACATTTCAGACAATATGC 58.244 34.615 0.00 0.00 0.00 3.14
4292 5839 9.932699 GATCTTGAAGACATTTCAGACAATATG 57.067 33.333 0.00 0.00 0.00 1.78
4293 5840 9.902684 AGATCTTGAAGACATTTCAGACAATAT 57.097 29.630 0.00 0.00 0.00 1.28
4294 5841 9.730705 AAGATCTTGAAGACATTTCAGACAATA 57.269 29.630 7.30 0.00 0.00 1.90
4295 5842 8.632906 AAGATCTTGAAGACATTTCAGACAAT 57.367 30.769 7.30 0.00 0.00 2.71
4296 5843 9.730705 ATAAGATCTTGAAGACATTTCAGACAA 57.269 29.630 18.47 0.00 0.00 3.18
4311 5858 9.658799 CCTCTGTTCACTTTTATAAGATCTTGA 57.341 33.333 18.47 1.68 35.30 3.02
4312 5859 8.887717 CCCTCTGTTCACTTTTATAAGATCTTG 58.112 37.037 18.47 2.46 35.30 3.02
4313 5860 8.826765 TCCCTCTGTTCACTTTTATAAGATCTT 58.173 33.333 13.56 13.56 35.30 2.40
4314 5861 8.380742 TCCCTCTGTTCACTTTTATAAGATCT 57.619 34.615 0.00 0.00 35.30 2.75
4315 5862 8.261522 ACTCCCTCTGTTCACTTTTATAAGATC 58.738 37.037 0.00 0.00 35.30 2.75
4316 5863 8.152023 ACTCCCTCTGTTCACTTTTATAAGAT 57.848 34.615 0.00 0.00 35.30 2.40
4317 5864 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
4357 5995 6.150307 AGAGACAAGCATAGTATGGTCGATAG 59.850 42.308 14.94 6.31 40.65 2.08
4384 6022 8.373048 AGTTCTCGTATGTAGATTGTAGAGAG 57.627 38.462 0.00 0.00 35.34 3.20
4467 6111 3.558418 GTCACACAAAAGTAAGAAGGCGA 59.442 43.478 0.00 0.00 0.00 5.54
4490 6134 6.504279 TGGAGGGATAATAAGACTTATTCCCC 59.496 42.308 29.52 29.52 42.71 4.81
4625 6308 3.067106 CACGAGCACTCCAAAACTGTAT 58.933 45.455 0.00 0.00 0.00 2.29
4628 6311 0.040958 GCACGAGCACTCCAAAACTG 60.041 55.000 0.00 0.00 41.58 3.16
4643 6326 0.439985 CCATGAACAACTCGAGCACG 59.560 55.000 13.61 3.35 41.26 5.34
4679 6362 3.067833 GGACGAGAGGGACAAAAGAAAG 58.932 50.000 0.00 0.00 0.00 2.62
4711 6400 5.652452 AGCAAATCCTTGGGTATTGTACTTC 59.348 40.000 0.00 0.00 32.76 3.01
4803 6492 2.420129 GGTCAGGTTCTATGCACCGAAT 60.420 50.000 0.00 0.00 39.56 3.34
4869 6558 1.632018 TTACCGGGCCCTTCATCTGG 61.632 60.000 22.43 14.47 0.00 3.86
4921 6613 3.953612 AGAACATTCAAGACCACAAGCAA 59.046 39.130 0.00 0.00 0.00 3.91
4959 6654 5.183713 TCTGATCAAAAGGTGCAACATAAGG 59.816 40.000 3.64 0.00 39.98 2.69
4963 6658 5.948162 AGTATCTGATCAAAAGGTGCAACAT 59.052 36.000 3.64 0.00 39.98 2.71
4964 6659 5.316167 AGTATCTGATCAAAAGGTGCAACA 58.684 37.500 3.64 0.00 39.98 3.33
5049 6744 9.158233 GTAGGACTGATCAGCTTAGTATACTAG 57.842 40.741 22.83 8.40 0.00 2.57
5052 6747 7.120138 GGAGTAGGACTGATCAGCTTAGTATAC 59.880 44.444 22.83 14.42 0.00 1.47
5075 6772 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5076 6773 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5077 6774 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5078 6775 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5079 6776 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
5080 6777 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
5081 6778 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
5082 6779 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
5083 6780 7.306632 CCATATTCGAGACAAGTAATTCCGAAC 60.307 40.741 0.00 0.00 37.38 3.95
5084 6781 6.700081 CCATATTCGAGACAAGTAATTCCGAA 59.300 38.462 0.00 0.00 38.59 4.30
5085 6782 6.213677 CCATATTCGAGACAAGTAATTCCGA 58.786 40.000 0.00 0.00 0.00 4.55
5086 6783 5.405571 CCCATATTCGAGACAAGTAATTCCG 59.594 44.000 0.00 0.00 0.00 4.30
5087 6784 6.202954 CACCCATATTCGAGACAAGTAATTCC 59.797 42.308 0.00 0.00 0.00 3.01
5088 6785 6.761714 ACACCCATATTCGAGACAAGTAATTC 59.238 38.462 0.00 0.00 0.00 2.17
5089 6786 6.650120 ACACCCATATTCGAGACAAGTAATT 58.350 36.000 0.00 0.00 0.00 1.40
5090 6787 6.235231 ACACCCATATTCGAGACAAGTAAT 57.765 37.500 0.00 0.00 0.00 1.89
5091 6788 5.670792 ACACCCATATTCGAGACAAGTAA 57.329 39.130 0.00 0.00 0.00 2.24
5092 6789 6.776116 AGATACACCCATATTCGAGACAAGTA 59.224 38.462 0.00 0.00 0.00 2.24
5093 6790 5.598830 AGATACACCCATATTCGAGACAAGT 59.401 40.000 0.00 0.00 0.00 3.16
5094 6791 6.090483 AGATACACCCATATTCGAGACAAG 57.910 41.667 0.00 0.00 0.00 3.16
5095 6792 7.002276 TCTAGATACACCCATATTCGAGACAA 58.998 38.462 0.00 0.00 0.00 3.18
5096 6793 6.540083 TCTAGATACACCCATATTCGAGACA 58.460 40.000 0.00 0.00 0.00 3.41
5097 6794 7.175293 AGTTCTAGATACACCCATATTCGAGAC 59.825 40.741 0.00 0.00 0.00 3.36
5098 6795 7.232188 AGTTCTAGATACACCCATATTCGAGA 58.768 38.462 0.00 0.00 0.00 4.04
5099 6796 7.455641 AGTTCTAGATACACCCATATTCGAG 57.544 40.000 0.00 0.00 0.00 4.04
5100 6797 8.929260 TTAGTTCTAGATACACCCATATTCGA 57.071 34.615 0.00 0.00 0.00 3.71
5101 6798 9.976511 TTTTAGTTCTAGATACACCCATATTCG 57.023 33.333 0.00 0.00 0.00 3.34
5106 6803 8.921205 ACGTATTTTAGTTCTAGATACACCCAT 58.079 33.333 0.00 0.00 0.00 4.00
5107 6804 8.297470 ACGTATTTTAGTTCTAGATACACCCA 57.703 34.615 0.00 0.00 0.00 4.51
5108 6805 8.628280 AGACGTATTTTAGTTCTAGATACACCC 58.372 37.037 0.00 0.00 0.00 4.61
5115 6812 9.117183 TGCATCTAGACGTATTTTAGTTCTAGA 57.883 33.333 8.64 8.64 38.94 2.43
5116 6813 9.900710 ATGCATCTAGACGTATTTTAGTTCTAG 57.099 33.333 0.00 0.00 0.00 2.43
5117 6814 9.894783 GATGCATCTAGACGTATTTTAGTTCTA 57.105 33.333 19.70 0.00 0.00 2.10
5118 6815 7.868415 GGATGCATCTAGACGTATTTTAGTTCT 59.132 37.037 25.28 0.00 0.00 3.01
5119 6816 7.652105 TGGATGCATCTAGACGTATTTTAGTTC 59.348 37.037 25.28 3.59 0.00 3.01
5120 6817 7.497595 TGGATGCATCTAGACGTATTTTAGTT 58.502 34.615 25.28 0.00 0.00 2.24
5121 6818 7.050970 TGGATGCATCTAGACGTATTTTAGT 57.949 36.000 25.28 0.00 0.00 2.24
5122 6819 8.539770 AATGGATGCATCTAGACGTATTTTAG 57.460 34.615 25.28 0.00 0.00 1.85
5123 6820 8.902540 AAATGGATGCATCTAGACGTATTTTA 57.097 30.769 25.28 0.00 0.00 1.52
5124 6821 7.716998 AGAAATGGATGCATCTAGACGTATTTT 59.283 33.333 25.28 14.57 0.00 1.82
5125 6822 7.172190 CAGAAATGGATGCATCTAGACGTATTT 59.828 37.037 25.28 15.24 0.00 1.40
5126 6823 6.648310 CAGAAATGGATGCATCTAGACGTATT 59.352 38.462 25.28 7.52 0.00 1.89
5127 6824 6.162079 CAGAAATGGATGCATCTAGACGTAT 58.838 40.000 25.28 1.05 0.00 3.06
5128 6825 5.532557 CAGAAATGGATGCATCTAGACGTA 58.467 41.667 25.28 5.08 0.00 3.57
5129 6826 4.375272 CAGAAATGGATGCATCTAGACGT 58.625 43.478 25.28 8.02 0.00 4.34
5130 6827 3.186001 GCAGAAATGGATGCATCTAGACG 59.814 47.826 25.28 9.46 42.11 4.18
5131 6828 3.186001 CGCAGAAATGGATGCATCTAGAC 59.814 47.826 25.28 14.42 42.68 2.59
5132 6829 3.070015 TCGCAGAAATGGATGCATCTAGA 59.930 43.478 25.28 9.00 42.68 2.43
5133 6830 3.186001 GTCGCAGAAATGGATGCATCTAG 59.814 47.826 25.28 9.06 42.68 2.43
5134 6831 3.133691 GTCGCAGAAATGGATGCATCTA 58.866 45.455 25.28 20.79 42.68 1.98
5135 6832 1.945394 GTCGCAGAAATGGATGCATCT 59.055 47.619 25.28 6.25 42.68 2.90
5136 6833 1.672363 TGTCGCAGAAATGGATGCATC 59.328 47.619 18.81 18.81 42.68 3.91
5137 6834 1.753930 TGTCGCAGAAATGGATGCAT 58.246 45.000 0.00 0.00 42.68 3.96
5138 6835 1.469703 CTTGTCGCAGAAATGGATGCA 59.530 47.619 0.00 0.00 42.68 3.96
5139 6836 1.470098 ACTTGTCGCAGAAATGGATGC 59.530 47.619 0.00 0.00 39.69 3.91
5140 6837 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
5141 6838 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
5142 6839 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
5143 6840 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
5144 6841 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
5145 6842 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
5146 6843 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
5147 6844 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
5148 6845 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
5149 6846 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
5150 6847 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
5151 6848 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
5152 6849 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
5153 6850 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5154 6851 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5155 6852 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5156 6853 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5157 6854 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5158 6855 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5159 6856 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5160 6857 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
5161 6858 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
5162 6859 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
5163 6860 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
5164 6861 0.172803 CAACTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30
5165 6862 0.172803 CCAACTACTCCCTCCGTTCG 59.827 60.000 0.00 0.00 0.00 3.95
5166 6863 1.264295 ACCAACTACTCCCTCCGTTC 58.736 55.000 0.00 0.00 0.00 3.95
5167 6864 1.346722 CAACCAACTACTCCCTCCGTT 59.653 52.381 0.00 0.00 0.00 4.44
5168 6865 0.974383 CAACCAACTACTCCCTCCGT 59.026 55.000 0.00 0.00 0.00 4.69
5169 6866 0.249398 CCAACCAACTACTCCCTCCG 59.751 60.000 0.00 0.00 0.00 4.63
5170 6867 0.618981 CCCAACCAACTACTCCCTCC 59.381 60.000 0.00 0.00 0.00 4.30
5171 6868 1.359168 ACCCAACCAACTACTCCCTC 58.641 55.000 0.00 0.00 0.00 4.30
5172 6869 2.727429 TACCCAACCAACTACTCCCT 57.273 50.000 0.00 0.00 0.00 4.20
5173 6870 4.014406 CAAATACCCAACCAACTACTCCC 58.986 47.826 0.00 0.00 0.00 4.30
5174 6871 3.442625 GCAAATACCCAACCAACTACTCC 59.557 47.826 0.00 0.00 0.00 3.85
5175 6872 4.332828 AGCAAATACCCAACCAACTACTC 58.667 43.478 0.00 0.00 0.00 2.59
5176 6873 4.382386 AGCAAATACCCAACCAACTACT 57.618 40.909 0.00 0.00 0.00 2.57
5177 6874 5.250982 AGTAGCAAATACCCAACCAACTAC 58.749 41.667 0.00 0.00 34.67 2.73
5178 6875 5.508280 AGTAGCAAATACCCAACCAACTA 57.492 39.130 0.00 0.00 34.67 2.24
5179 6876 4.382386 AGTAGCAAATACCCAACCAACT 57.618 40.909 0.00 0.00 34.67 3.16
5328 7036 2.562296 TGGGCTCCTAGTTCTTCCAAT 58.438 47.619 0.00 0.00 0.00 3.16
5329 7037 2.038863 TGGGCTCCTAGTTCTTCCAA 57.961 50.000 0.00 0.00 0.00 3.53
5331 7039 2.505819 TGAATGGGCTCCTAGTTCTTCC 59.494 50.000 0.00 0.00 0.00 3.46
5340 7048 4.018050 AGTTGAATACTTGAATGGGCTCCT 60.018 41.667 0.00 0.00 31.29 3.69
5341 7049 4.096984 CAGTTGAATACTTGAATGGGCTCC 59.903 45.833 0.00 0.00 33.85 4.70
5347 7055 9.573133 GGAAATAACCAGTTGAATACTTGAATG 57.427 33.333 0.00 0.00 33.85 2.67
5407 7115 2.029844 GAGCTCACCGTCTGGCAAC 61.030 63.158 9.40 0.00 39.70 4.17
5413 7121 4.502187 TGAGTGAGCTCACCGTCT 57.498 55.556 37.09 22.67 45.94 4.18
5434 7142 6.704493 CCATTTCATAATGAGCATTTCCAAGG 59.296 38.462 0.52 0.00 43.12 3.61
5462 7170 5.422331 CCACTAGAAGAAATGACCAGTAGGA 59.578 44.000 0.00 0.00 38.69 2.94
5466 7174 5.825593 TTCCACTAGAAGAAATGACCAGT 57.174 39.130 0.00 0.00 0.00 4.00
5472 7180 7.708322 TCGATCTGAATTCCACTAGAAGAAATG 59.292 37.037 2.27 0.00 38.07 2.32
5473 7181 7.708752 GTCGATCTGAATTCCACTAGAAGAAAT 59.291 37.037 2.27 0.00 38.07 2.17
5496 7205 6.188175 GCAATTTGCAGACTAGATTAAGTCG 58.812 40.000 16.35 0.00 44.26 4.18
5532 7245 8.055279 TCTACCTGAACAATCAAATTCCAATC 57.945 34.615 0.00 0.00 34.49 2.67
5557 7270 4.223923 GGTAGGCTGGTAGCAGATCAATAT 59.776 45.833 25.66 4.92 44.75 1.28
5558 7271 3.578716 GGTAGGCTGGTAGCAGATCAATA 59.421 47.826 25.66 6.95 44.75 1.90
5630 7343 6.697019 GTGTAAATCTGAAAACTTGCACATGT 59.303 34.615 0.00 0.00 35.34 3.21
5656 7369 5.715279 AGACGCCCTAATGTGATATAAGCTA 59.285 40.000 0.00 0.00 0.00 3.32
5667 7380 0.537188 CACTGGAGACGCCCTAATGT 59.463 55.000 0.00 0.00 34.97 2.71
5684 7397 3.181479 TGAGACTTATGGCCGACATACAC 60.181 47.826 0.00 0.00 41.61 2.90
5689 7402 3.334691 CTTTTGAGACTTATGGCCGACA 58.665 45.455 0.00 0.00 0.00 4.35
5723 7439 5.972382 GTCGATCTCCTCATGTGTAAAGTAC 59.028 44.000 0.00 0.00 0.00 2.73
5749 7466 4.428294 TTGGAGAATGGAGATGCCTTAG 57.572 45.455 0.00 0.00 37.63 2.18
5755 7472 3.220110 CCCACATTGGAGAATGGAGATG 58.780 50.000 0.00 0.00 43.00 2.90
5756 7473 2.423947 GCCCACATTGGAGAATGGAGAT 60.424 50.000 0.00 0.00 43.00 2.75
5833 7551 0.453950 GCACTGCTGATTCTTGTGCG 60.454 55.000 0.00 0.00 43.19 5.34
5850 7568 5.422650 GGTATTTTTGGGGTTGTTATAGGCA 59.577 40.000 0.00 0.00 0.00 4.75
5860 7578 6.893554 GGTAGTTATGAGGTATTTTTGGGGTT 59.106 38.462 0.00 0.00 0.00 4.11
5897 7615 7.401060 TTGTATATATGTTTCCAGATGGGGT 57.599 36.000 0.00 0.00 37.22 4.95
5915 7633 8.005192 TGTGCAATTGAGCCATATTTTGTATA 57.995 30.769 10.34 0.00 0.00 1.47


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.