Multiple sequence alignment - TraesCS5A01G417300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G417300 chr5A 100.000 2237 0 0 1 2237 605367139 605364903 0.000000e+00 4132.0
1 TraesCS5A01G417300 chr5A 95.351 1054 41 3 573 1625 605689377 605688331 0.000000e+00 1668.0
2 TraesCS5A01G417300 chr5A 87.654 729 56 12 756 1462 605749546 605748830 0.000000e+00 817.0
3 TraesCS5A01G417300 chr5A 88.692 451 46 3 1136 1585 605258620 605258174 1.510000e-151 545.0
4 TraesCS5A01G417300 chr5A 95.500 200 9 0 1633 1832 605685999 605685800 9.970000e-84 320.0
5 TraesCS5A01G417300 chr5A 98.246 171 2 1 1 170 605689539 605689369 4.670000e-77 298.0
6 TraesCS5A01G417300 chr5A 85.560 277 27 11 1856 2126 605685806 605685537 6.080000e-71 278.0
7 TraesCS5A01G417300 chr5A 100.000 35 0 0 1366 1400 605258443 605258409 5.160000e-07 65.8
8 TraesCS5A01G417300 chr5D 93.813 986 50 4 573 1557 483825202 483826177 0.000000e+00 1472.0
9 TraesCS5A01G417300 chr5D 91.514 872 40 4 686 1557 483985785 483986622 0.000000e+00 1170.0
10 TraesCS5A01G417300 chr5D 85.346 621 86 3 844 1462 483970687 483970070 2.420000e-179 638.0
11 TraesCS5A01G417300 chr5D 93.567 171 10 1 1 170 483825040 483825210 1.030000e-63 254.0
12 TraesCS5A01G417300 chr5D 79.178 365 68 7 211 572 451624500 451624141 1.720000e-61 246.0
13 TraesCS5A01G417300 chr5D 94.175 103 6 0 1 103 483985684 483985786 8.270000e-35 158.0
14 TraesCS5A01G417300 chr5D 91.304 115 10 0 1633 1747 483990225 483990339 8.270000e-35 158.0
15 TraesCS5A01G417300 chr5B 88.462 884 64 18 754 1625 595122428 595121571 0.000000e+00 1033.0
16 TraesCS5A01G417300 chr5B 87.670 884 78 13 748 1625 595162659 595161801 0.000000e+00 1000.0
17 TraesCS5A01G417300 chr5B 78.652 445 64 14 765 1208 595223475 595223061 1.320000e-67 267.0
18 TraesCS5A01G417300 chr5B 94.118 51 3 0 2187 2237 595033905 595033855 6.620000e-11 78.7
19 TraesCS5A01G417300 chr2D 94.554 404 21 1 170 572 92739062 92738659 6.780000e-175 623.0
20 TraesCS5A01G417300 chr2D 86.600 403 45 3 171 572 229633945 229633551 9.490000e-119 436.0
21 TraesCS5A01G417300 chr6B 87.871 404 42 3 171 573 538943861 538944258 3.360000e-128 468.0
22 TraesCS5A01G417300 chr7B 88.441 372 42 1 202 572 720785249 720785620 4.380000e-122 448.0
23 TraesCS5A01G417300 chr4A 85.572 402 54 4 172 571 54724962 54725361 3.440000e-113 418.0
24 TraesCS5A01G417300 chr2B 80.988 405 70 7 170 572 22785373 22785772 4.640000e-82 315.0
25 TraesCS5A01G417300 chr3A 81.443 388 57 11 171 555 662501981 662502356 1.000000e-78 303.0
26 TraesCS5A01G417300 chr3A 81.388 317 52 6 171 484 480155660 480155972 3.690000e-63 252.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G417300 chr5A 605364903 605367139 2236 True 4132.000000 4132 100.00000 1 2237 1 chr5A.!!$R1 2236
1 TraesCS5A01G417300 chr5A 605748830 605749546 716 True 817.000000 817 87.65400 756 1462 1 chr5A.!!$R2 706
2 TraesCS5A01G417300 chr5A 605685537 605689539 4002 True 641.000000 1668 93.66425 1 2126 4 chr5A.!!$R4 2125
3 TraesCS5A01G417300 chr5D 483825040 483826177 1137 False 863.000000 1472 93.69000 1 1557 2 chr5D.!!$F1 1556
4 TraesCS5A01G417300 chr5D 483970070 483970687 617 True 638.000000 638 85.34600 844 1462 1 chr5D.!!$R2 618
5 TraesCS5A01G417300 chr5D 483985684 483990339 4655 False 495.333333 1170 92.33100 1 1747 3 chr5D.!!$F2 1746
6 TraesCS5A01G417300 chr5B 595121571 595122428 857 True 1033.000000 1033 88.46200 754 1625 1 chr5B.!!$R2 871
7 TraesCS5A01G417300 chr5B 595161801 595162659 858 True 1000.000000 1000 87.67000 748 1625 1 chr5B.!!$R3 877

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
385 387 0.037697 GTGCCGACCAGTACACATCA 60.038 55.0 0.0 0.0 33.23 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2197 5800 0.033504 GTGTCCGTTCAGGCAAGAGA 59.966 55.0 0.0 0.0 40.77 3.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 183 3.211803 CGGACACGTGAGAAAGTATCA 57.788 47.619 25.01 0.00 34.81 2.15
182 184 2.915463 CGGACACGTGAGAAAGTATCAC 59.085 50.000 25.01 0.34 42.94 3.06
183 185 3.610821 CGGACACGTGAGAAAGTATCACA 60.611 47.826 25.01 0.00 45.96 3.58
184 186 4.495422 GGACACGTGAGAAAGTATCACAT 58.505 43.478 25.01 0.00 45.96 3.21
185 187 4.327357 GGACACGTGAGAAAGTATCACATG 59.673 45.833 25.01 4.03 45.96 3.21
186 188 4.245660 ACACGTGAGAAAGTATCACATGG 58.754 43.478 25.01 0.00 43.28 3.66
187 189 4.021456 ACACGTGAGAAAGTATCACATGGA 60.021 41.667 25.01 0.00 43.28 3.41
188 190 4.929211 CACGTGAGAAAGTATCACATGGAA 59.071 41.667 10.90 0.00 45.96 3.53
189 191 5.062683 CACGTGAGAAAGTATCACATGGAAG 59.937 44.000 10.90 0.00 45.96 3.46
190 192 4.033358 CGTGAGAAAGTATCACATGGAAGC 59.967 45.833 0.00 0.00 45.96 3.86
191 193 4.333926 GTGAGAAAGTATCACATGGAAGCC 59.666 45.833 0.00 0.00 45.18 4.35
192 194 4.019411 TGAGAAAGTATCACATGGAAGCCA 60.019 41.667 0.00 0.00 38.19 4.75
193 195 4.922206 AGAAAGTATCACATGGAAGCCAA 58.078 39.130 0.00 0.00 36.95 4.52
194 196 4.946157 AGAAAGTATCACATGGAAGCCAAG 59.054 41.667 0.00 0.00 36.95 3.61
195 197 4.307032 AAGTATCACATGGAAGCCAAGT 57.693 40.909 0.00 0.00 35.73 3.16
196 198 4.307032 AGTATCACATGGAAGCCAAGTT 57.693 40.909 0.00 0.00 32.85 2.66
197 199 4.666512 AGTATCACATGGAAGCCAAGTTT 58.333 39.130 0.00 0.00 32.85 2.66
198 200 5.079643 AGTATCACATGGAAGCCAAGTTTT 58.920 37.500 0.00 0.00 32.85 2.43
199 201 6.245408 AGTATCACATGGAAGCCAAGTTTTA 58.755 36.000 0.00 0.00 32.85 1.52
200 202 5.649782 ATCACATGGAAGCCAAGTTTTAG 57.350 39.130 0.00 0.00 32.85 1.85
201 203 4.469657 TCACATGGAAGCCAAGTTTTAGT 58.530 39.130 0.00 0.00 32.85 2.24
202 204 4.278170 TCACATGGAAGCCAAGTTTTAGTG 59.722 41.667 0.00 0.00 32.85 2.74
203 205 3.573967 ACATGGAAGCCAAGTTTTAGTGG 59.426 43.478 0.00 0.00 36.95 4.00
204 206 3.586470 TGGAAGCCAAGTTTTAGTGGA 57.414 42.857 0.00 0.00 37.03 4.02
205 207 3.904717 TGGAAGCCAAGTTTTAGTGGAA 58.095 40.909 0.00 0.00 37.03 3.53
206 208 4.282496 TGGAAGCCAAGTTTTAGTGGAAA 58.718 39.130 0.00 0.00 37.03 3.13
207 209 4.098807 TGGAAGCCAAGTTTTAGTGGAAAC 59.901 41.667 0.00 0.00 39.28 2.78
208 210 4.500887 GGAAGCCAAGTTTTAGTGGAAACC 60.501 45.833 0.00 0.00 39.71 3.27
209 211 2.621526 AGCCAAGTTTTAGTGGAAACCG 59.378 45.455 0.00 0.00 39.71 4.44
210 212 2.287970 GCCAAGTTTTAGTGGAAACCGG 60.288 50.000 0.00 0.00 39.71 5.28
211 213 2.953648 CCAAGTTTTAGTGGAAACCGGT 59.046 45.455 0.00 0.00 39.71 5.28
212 214 3.243267 CCAAGTTTTAGTGGAAACCGGTG 60.243 47.826 8.52 0.00 39.71 4.94
213 215 3.564053 AGTTTTAGTGGAAACCGGTGA 57.436 42.857 8.52 0.00 39.71 4.02
214 216 3.888583 AGTTTTAGTGGAAACCGGTGAA 58.111 40.909 8.52 0.00 39.71 3.18
215 217 4.271661 AGTTTTAGTGGAAACCGGTGAAA 58.728 39.130 8.52 0.00 39.71 2.69
216 218 4.705991 AGTTTTAGTGGAAACCGGTGAAAA 59.294 37.500 8.52 4.02 39.71 2.29
217 219 4.635833 TTTAGTGGAAACCGGTGAAAAC 57.364 40.909 8.52 5.13 0.00 2.43
218 220 1.395635 AGTGGAAACCGGTGAAAACC 58.604 50.000 8.52 8.34 0.00 3.27
219 221 1.104630 GTGGAAACCGGTGAAAACCA 58.895 50.000 8.52 11.05 0.00 3.67
220 222 1.104630 TGGAAACCGGTGAAAACCAC 58.895 50.000 8.52 0.00 44.95 4.16
234 236 7.481275 GTGAAAACCACATGAAAATGATGTT 57.519 32.000 0.00 0.00 45.03 2.71
235 237 7.918643 GTGAAAACCACATGAAAATGATGTTT 58.081 30.769 0.00 0.00 45.03 2.83
236 238 8.397148 GTGAAAACCACATGAAAATGATGTTTT 58.603 29.630 0.00 15.78 45.03 2.43
237 239 9.605275 TGAAAACCACATGAAAATGATGTTTTA 57.395 25.926 0.00 8.04 38.05 1.52
241 243 9.612066 AACCACATGAAAATGATGTTTTAAAGT 57.388 25.926 0.00 0.00 31.46 2.66
242 244 9.612066 ACCACATGAAAATGATGTTTTAAAGTT 57.388 25.926 0.00 0.00 31.46 2.66
283 285 7.490962 AAAATGTGAGACGTTAAGAATGTGA 57.509 32.000 0.00 0.00 0.00 3.58
284 286 7.672983 AAATGTGAGACGTTAAGAATGTGAT 57.327 32.000 0.00 0.00 0.00 3.06
285 287 6.653273 ATGTGAGACGTTAAGAATGTGATG 57.347 37.500 0.00 0.00 0.00 3.07
286 288 5.538118 TGTGAGACGTTAAGAATGTGATGT 58.462 37.500 0.00 0.00 0.00 3.06
287 289 5.989168 TGTGAGACGTTAAGAATGTGATGTT 59.011 36.000 0.00 0.00 0.00 2.71
288 290 6.145534 TGTGAGACGTTAAGAATGTGATGTTC 59.854 38.462 0.00 0.00 0.00 3.18
289 291 6.366332 GTGAGACGTTAAGAATGTGATGTTCT 59.634 38.462 0.00 0.00 37.52 3.01
290 292 7.541091 GTGAGACGTTAAGAATGTGATGTTCTA 59.459 37.037 0.00 0.00 34.97 2.10
291 293 8.251026 TGAGACGTTAAGAATGTGATGTTCTAT 58.749 33.333 0.00 0.00 34.97 1.98
292 294 9.088512 GAGACGTTAAGAATGTGATGTTCTATT 57.911 33.333 0.00 0.00 34.97 1.73
295 297 9.095065 ACGTTAAGAATGTGATGTTCTATTACC 57.905 33.333 0.00 0.00 34.97 2.85
296 298 9.093970 CGTTAAGAATGTGATGTTCTATTACCA 57.906 33.333 0.00 0.00 34.97 3.25
300 302 8.442632 AGAATGTGATGTTCTATTACCATGTG 57.557 34.615 0.00 0.00 34.32 3.21
301 303 8.267183 AGAATGTGATGTTCTATTACCATGTGA 58.733 33.333 0.00 0.00 34.32 3.58
302 304 8.806429 AATGTGATGTTCTATTACCATGTGAA 57.194 30.769 0.00 0.00 0.00 3.18
303 305 8.806429 ATGTGATGTTCTATTACCATGTGAAA 57.194 30.769 0.00 0.00 0.00 2.69
304 306 8.806429 TGTGATGTTCTATTACCATGTGAAAT 57.194 30.769 0.00 0.00 0.00 2.17
305 307 9.241919 TGTGATGTTCTATTACCATGTGAAATT 57.758 29.630 0.00 0.00 0.00 1.82
308 310 9.736023 GATGTTCTATTACCATGTGAAATTTCC 57.264 33.333 15.48 7.59 0.00 3.13
309 311 8.642935 TGTTCTATTACCATGTGAAATTTCCA 57.357 30.769 15.48 12.67 0.00 3.53
310 312 9.083422 TGTTCTATTACCATGTGAAATTTCCAA 57.917 29.630 15.48 4.17 0.00 3.53
311 313 9.921637 GTTCTATTACCATGTGAAATTTCCAAA 57.078 29.630 15.48 1.67 0.00 3.28
316 318 9.790344 ATTACCATGTGAAATTTCCAAATTCAA 57.210 25.926 15.48 3.52 37.62 2.69
317 319 9.618890 TTACCATGTGAAATTTCCAAATTCAAA 57.381 25.926 15.48 0.00 37.62 2.69
318 320 7.929159 ACCATGTGAAATTTCCAAATTCAAAC 58.071 30.769 15.48 4.42 37.62 2.93
319 321 7.555554 ACCATGTGAAATTTCCAAATTCAAACA 59.444 29.630 15.48 9.68 37.62 2.83
320 322 7.856894 CCATGTGAAATTTCCAAATTCAAACAC 59.143 33.333 15.48 3.86 37.62 3.32
321 323 7.912056 TGTGAAATTTCCAAATTCAAACACA 57.088 28.000 15.48 6.32 37.62 3.72
322 324 8.503458 TGTGAAATTTCCAAATTCAAACACAT 57.497 26.923 15.48 0.00 37.62 3.21
323 325 8.954350 TGTGAAATTTCCAAATTCAAACACATT 58.046 25.926 15.48 0.00 37.62 2.71
326 328 9.597999 GAAATTTCCAAATTCAAACACATTAGC 57.402 29.630 6.95 0.00 37.62 3.09
327 329 8.674263 AATTTCCAAATTCAAACACATTAGCA 57.326 26.923 0.00 0.00 33.54 3.49
328 330 8.851541 ATTTCCAAATTCAAACACATTAGCAT 57.148 26.923 0.00 0.00 0.00 3.79
329 331 8.674263 TTTCCAAATTCAAACACATTAGCATT 57.326 26.923 0.00 0.00 0.00 3.56
330 332 8.674263 TTCCAAATTCAAACACATTAGCATTT 57.326 26.923 0.00 0.00 0.00 2.32
331 333 9.770097 TTCCAAATTCAAACACATTAGCATTTA 57.230 25.926 0.00 0.00 0.00 1.40
332 334 9.202273 TCCAAATTCAAACACATTAGCATTTAC 57.798 29.630 0.00 0.00 0.00 2.01
333 335 8.161610 CCAAATTCAAACACATTAGCATTTACG 58.838 33.333 0.00 0.00 0.00 3.18
334 336 8.910666 CAAATTCAAACACATTAGCATTTACGA 58.089 29.630 0.00 0.00 0.00 3.43
335 337 8.673626 AATTCAAACACATTAGCATTTACGAG 57.326 30.769 0.00 0.00 0.00 4.18
336 338 5.627172 TCAAACACATTAGCATTTACGAGC 58.373 37.500 0.00 0.00 0.00 5.03
337 339 5.411361 TCAAACACATTAGCATTTACGAGCT 59.589 36.000 0.00 0.00 44.55 4.09
338 340 6.592220 TCAAACACATTAGCATTTACGAGCTA 59.408 34.615 0.00 0.00 42.05 3.32
339 341 5.968387 ACACATTAGCATTTACGAGCTAC 57.032 39.130 0.00 0.00 42.55 3.58
340 342 4.809426 ACACATTAGCATTTACGAGCTACC 59.191 41.667 0.00 0.00 42.55 3.18
341 343 4.808895 CACATTAGCATTTACGAGCTACCA 59.191 41.667 0.00 0.00 42.55 3.25
342 344 5.293324 CACATTAGCATTTACGAGCTACCAA 59.707 40.000 0.00 0.00 42.55 3.67
343 345 5.878116 ACATTAGCATTTACGAGCTACCAAA 59.122 36.000 0.00 0.00 42.55 3.28
344 346 6.373216 ACATTAGCATTTACGAGCTACCAAAA 59.627 34.615 0.00 0.00 42.55 2.44
345 347 6.804770 TTAGCATTTACGAGCTACCAAAAA 57.195 33.333 0.00 0.00 42.55 1.94
371 373 9.567848 AAACAAAATCAGTATTAAATAGTGCCG 57.432 29.630 0.00 0.00 36.38 5.69
372 374 8.500753 ACAAAATCAGTATTAAATAGTGCCGA 57.499 30.769 0.00 0.00 36.38 5.54
373 375 8.395633 ACAAAATCAGTATTAAATAGTGCCGAC 58.604 33.333 0.00 0.00 36.38 4.79
374 376 7.492352 AAATCAGTATTAAATAGTGCCGACC 57.508 36.000 0.00 0.00 36.38 4.79
375 377 5.601583 TCAGTATTAAATAGTGCCGACCA 57.398 39.130 0.00 0.00 36.38 4.02
376 378 5.597806 TCAGTATTAAATAGTGCCGACCAG 58.402 41.667 0.00 0.00 36.38 4.00
377 379 5.128171 TCAGTATTAAATAGTGCCGACCAGT 59.872 40.000 0.00 0.00 36.38 4.00
378 380 6.321945 TCAGTATTAAATAGTGCCGACCAGTA 59.678 38.462 0.00 0.00 36.38 2.74
379 381 6.420008 CAGTATTAAATAGTGCCGACCAGTAC 59.580 42.308 0.00 0.00 32.37 2.73
380 382 4.804868 TTAAATAGTGCCGACCAGTACA 57.195 40.909 0.00 0.00 32.37 2.90
381 383 2.667473 AATAGTGCCGACCAGTACAC 57.333 50.000 0.00 0.00 32.37 2.90
382 384 1.552578 ATAGTGCCGACCAGTACACA 58.447 50.000 0.00 0.00 35.47 3.72
383 385 1.552578 TAGTGCCGACCAGTACACAT 58.447 50.000 0.00 0.00 35.47 3.21
384 386 0.246635 AGTGCCGACCAGTACACATC 59.753 55.000 0.00 0.00 35.47 3.06
385 387 0.037697 GTGCCGACCAGTACACATCA 60.038 55.000 0.00 0.00 33.23 3.07
386 388 0.037697 TGCCGACCAGTACACATCAC 60.038 55.000 0.00 0.00 0.00 3.06
387 389 0.246635 GCCGACCAGTACACATCACT 59.753 55.000 0.00 0.00 0.00 3.41
388 390 1.475280 GCCGACCAGTACACATCACTA 59.525 52.381 0.00 0.00 0.00 2.74
389 391 2.100916 GCCGACCAGTACACATCACTAT 59.899 50.000 0.00 0.00 0.00 2.12
390 392 3.430374 GCCGACCAGTACACATCACTATT 60.430 47.826 0.00 0.00 0.00 1.73
391 393 4.360563 CCGACCAGTACACATCACTATTC 58.639 47.826 0.00 0.00 0.00 1.75
392 394 4.142249 CCGACCAGTACACATCACTATTCA 60.142 45.833 0.00 0.00 0.00 2.57
393 395 5.451937 CCGACCAGTACACATCACTATTCAT 60.452 44.000 0.00 0.00 0.00 2.57
394 396 6.042777 CGACCAGTACACATCACTATTCATT 58.957 40.000 0.00 0.00 0.00 2.57
395 397 6.019559 CGACCAGTACACATCACTATTCATTG 60.020 42.308 0.00 0.00 0.00 2.82
396 398 5.586243 ACCAGTACACATCACTATTCATTGC 59.414 40.000 0.00 0.00 0.00 3.56
397 399 5.819379 CCAGTACACATCACTATTCATTGCT 59.181 40.000 0.00 0.00 0.00 3.91
398 400 6.986231 CCAGTACACATCACTATTCATTGCTA 59.014 38.462 0.00 0.00 0.00 3.49
399 401 7.495606 CCAGTACACATCACTATTCATTGCTAA 59.504 37.037 0.00 0.00 0.00 3.09
400 402 8.882736 CAGTACACATCACTATTCATTGCTAAA 58.117 33.333 0.00 0.00 0.00 1.85
401 403 9.618890 AGTACACATCACTATTCATTGCTAAAT 57.381 29.630 0.00 0.00 0.00 1.40
404 406 9.577110 ACACATCACTATTCATTGCTAAATTTG 57.423 29.630 0.00 0.00 0.00 2.32
405 407 9.577110 CACATCACTATTCATTGCTAAATTTGT 57.423 29.630 0.00 0.00 0.00 2.83
417 419 9.962759 CATTGCTAAATTTGTTCTTTTCATAGC 57.037 29.630 0.00 0.00 0.00 2.97
418 420 9.933723 ATTGCTAAATTTGTTCTTTTCATAGCT 57.066 25.926 0.00 0.00 0.00 3.32
419 421 8.970691 TGCTAAATTTGTTCTTTTCATAGCTC 57.029 30.769 0.00 0.00 0.00 4.09
420 422 7.750458 TGCTAAATTTGTTCTTTTCATAGCTCG 59.250 33.333 0.00 0.00 0.00 5.03
421 423 7.750903 GCTAAATTTGTTCTTTTCATAGCTCGT 59.249 33.333 0.00 0.00 0.00 4.18
424 426 9.959749 AAATTTGTTCTTTTCATAGCTCGTAAA 57.040 25.926 0.00 0.00 0.00 2.01
426 428 8.948853 TTTGTTCTTTTCATAGCTCGTAAATG 57.051 30.769 0.00 0.00 0.00 2.32
427 429 7.072177 TGTTCTTTTCATAGCTCGTAAATGG 57.928 36.000 0.00 0.00 0.00 3.16
428 430 6.653320 TGTTCTTTTCATAGCTCGTAAATGGT 59.347 34.615 0.00 0.00 0.00 3.55
429 431 7.820386 TGTTCTTTTCATAGCTCGTAAATGGTA 59.180 33.333 0.00 0.00 0.00 3.25
430 432 8.662141 GTTCTTTTCATAGCTCGTAAATGGTAA 58.338 33.333 0.00 0.00 0.00 2.85
431 433 8.958119 TCTTTTCATAGCTCGTAAATGGTAAT 57.042 30.769 0.00 0.00 0.00 1.89
432 434 8.826710 TCTTTTCATAGCTCGTAAATGGTAATG 58.173 33.333 0.00 0.00 0.00 1.90
433 435 8.500753 TTTTCATAGCTCGTAAATGGTAATGT 57.499 30.769 0.00 0.00 0.00 2.71
434 436 7.477144 TTCATAGCTCGTAAATGGTAATGTG 57.523 36.000 0.00 0.00 0.00 3.21
435 437 6.578944 TCATAGCTCGTAAATGGTAATGTGT 58.421 36.000 0.00 0.00 0.00 3.72
436 438 7.045416 TCATAGCTCGTAAATGGTAATGTGTT 58.955 34.615 0.00 0.00 0.00 3.32
437 439 7.551262 TCATAGCTCGTAAATGGTAATGTGTTT 59.449 33.333 0.00 0.00 0.00 2.83
438 440 5.938322 AGCTCGTAAATGGTAATGTGTTTG 58.062 37.500 0.00 0.00 0.00 2.93
439 441 5.703592 AGCTCGTAAATGGTAATGTGTTTGA 59.296 36.000 0.00 0.00 0.00 2.69
440 442 6.205853 AGCTCGTAAATGGTAATGTGTTTGAA 59.794 34.615 0.00 0.00 0.00 2.69
441 443 6.304683 GCTCGTAAATGGTAATGTGTTTGAAC 59.695 38.462 0.00 0.00 0.00 3.18
442 444 7.499321 TCGTAAATGGTAATGTGTTTGAACT 57.501 32.000 0.00 0.00 0.00 3.01
443 445 7.932335 TCGTAAATGGTAATGTGTTTGAACTT 58.068 30.769 0.00 0.00 0.00 2.66
444 446 8.071368 TCGTAAATGGTAATGTGTTTGAACTTC 58.929 33.333 0.00 0.00 0.00 3.01
445 447 7.858382 CGTAAATGGTAATGTGTTTGAACTTCA 59.142 33.333 0.00 0.00 0.00 3.02
446 448 9.522804 GTAAATGGTAATGTGTTTGAACTTCAA 57.477 29.630 0.00 0.00 34.03 2.69
448 450 9.442047 AAATGGTAATGTGTTTGAACTTCAAAA 57.558 25.926 16.79 4.42 46.53 2.44
449 451 9.612066 AATGGTAATGTGTTTGAACTTCAAAAT 57.388 25.926 16.79 6.36 46.53 1.82
450 452 9.612066 ATGGTAATGTGTTTGAACTTCAAAATT 57.388 25.926 16.79 14.84 46.53 1.82
451 453 9.442047 TGGTAATGTGTTTGAACTTCAAAATTT 57.558 25.926 16.79 11.01 46.53 1.82
456 458 9.991388 ATGTGTTTGAACTTCAAAATTTTCATG 57.009 25.926 16.79 0.00 46.53 3.07
457 459 7.961827 TGTGTTTGAACTTCAAAATTTTCATGC 59.038 29.630 16.79 4.27 46.53 4.06
458 460 7.429051 GTGTTTGAACTTCAAAATTTTCATGCC 59.571 33.333 16.79 3.67 46.53 4.40
459 461 7.120285 TGTTTGAACTTCAAAATTTTCATGCCA 59.880 29.630 16.79 5.85 46.53 4.92
460 462 7.621428 TTGAACTTCAAAATTTTCATGCCAA 57.379 28.000 0.00 0.00 32.71 4.52
461 463 7.804843 TGAACTTCAAAATTTTCATGCCAAT 57.195 28.000 0.00 0.00 0.00 3.16
462 464 8.899427 TGAACTTCAAAATTTTCATGCCAATA 57.101 26.923 0.00 0.00 0.00 1.90
463 465 8.991026 TGAACTTCAAAATTTTCATGCCAATAG 58.009 29.630 0.00 0.00 0.00 1.73
464 466 9.206870 GAACTTCAAAATTTTCATGCCAATAGA 57.793 29.630 0.00 0.00 0.00 1.98
465 467 9.558396 AACTTCAAAATTTTCATGCCAATAGAA 57.442 25.926 0.00 0.00 0.00 2.10
466 468 8.992073 ACTTCAAAATTTTCATGCCAATAGAAC 58.008 29.630 0.00 0.00 0.00 3.01
467 469 8.899427 TTCAAAATTTTCATGCCAATAGAACA 57.101 26.923 0.00 0.00 0.00 3.18
468 470 9.504708 TTCAAAATTTTCATGCCAATAGAACAT 57.495 25.926 0.00 0.00 0.00 2.71
469 471 9.153721 TCAAAATTTTCATGCCAATAGAACATC 57.846 29.630 0.00 0.00 0.00 3.06
470 472 8.937884 CAAAATTTTCATGCCAATAGAACATCA 58.062 29.630 0.00 0.00 0.00 3.07
471 473 8.483307 AAATTTTCATGCCAATAGAACATCAC 57.517 30.769 0.00 0.00 0.00 3.06
472 474 4.880886 TTCATGCCAATAGAACATCACG 57.119 40.909 0.00 0.00 0.00 4.35
473 475 2.613595 TCATGCCAATAGAACATCACGC 59.386 45.455 0.00 0.00 0.00 5.34
474 476 2.401583 TGCCAATAGAACATCACGCT 57.598 45.000 0.00 0.00 0.00 5.07
475 477 2.279741 TGCCAATAGAACATCACGCTC 58.720 47.619 0.00 0.00 0.00 5.03
476 478 2.093500 TGCCAATAGAACATCACGCTCT 60.093 45.455 0.00 0.00 0.00 4.09
477 479 2.939103 GCCAATAGAACATCACGCTCTT 59.061 45.455 0.00 0.00 0.00 2.85
478 480 4.119862 GCCAATAGAACATCACGCTCTTA 58.880 43.478 0.00 0.00 0.00 2.10
479 481 4.570772 GCCAATAGAACATCACGCTCTTAA 59.429 41.667 0.00 0.00 0.00 1.85
480 482 5.502544 GCCAATAGAACATCACGCTCTTAAC 60.503 44.000 0.00 0.00 0.00 2.01
481 483 5.580691 CCAATAGAACATCACGCTCTTAACA 59.419 40.000 0.00 0.00 0.00 2.41
482 484 6.258727 CCAATAGAACATCACGCTCTTAACAT 59.741 38.462 0.00 0.00 0.00 2.71
483 485 7.340699 CAATAGAACATCACGCTCTTAACATC 58.659 38.462 0.00 0.00 0.00 3.06
484 486 4.184629 AGAACATCACGCTCTTAACATCC 58.815 43.478 0.00 0.00 0.00 3.51
485 487 3.895232 ACATCACGCTCTTAACATCCT 57.105 42.857 0.00 0.00 0.00 3.24
486 488 5.127194 AGAACATCACGCTCTTAACATCCTA 59.873 40.000 0.00 0.00 0.00 2.94
487 489 5.537300 ACATCACGCTCTTAACATCCTAT 57.463 39.130 0.00 0.00 0.00 2.57
488 490 6.650427 ACATCACGCTCTTAACATCCTATA 57.350 37.500 0.00 0.00 0.00 1.31
489 491 7.233389 ACATCACGCTCTTAACATCCTATAT 57.767 36.000 0.00 0.00 0.00 0.86
490 492 7.671302 ACATCACGCTCTTAACATCCTATATT 58.329 34.615 0.00 0.00 0.00 1.28
491 493 8.150945 ACATCACGCTCTTAACATCCTATATTT 58.849 33.333 0.00 0.00 0.00 1.40
492 494 8.993121 CATCACGCTCTTAACATCCTATATTTT 58.007 33.333 0.00 0.00 0.00 1.82
493 495 8.958119 TCACGCTCTTAACATCCTATATTTTT 57.042 30.769 0.00 0.00 0.00 1.94
494 496 9.042008 TCACGCTCTTAACATCCTATATTTTTC 57.958 33.333 0.00 0.00 0.00 2.29
495 497 9.046296 CACGCTCTTAACATCCTATATTTTTCT 57.954 33.333 0.00 0.00 0.00 2.52
496 498 9.262358 ACGCTCTTAACATCCTATATTTTTCTC 57.738 33.333 0.00 0.00 0.00 2.87
497 499 9.261180 CGCTCTTAACATCCTATATTTTTCTCA 57.739 33.333 0.00 0.00 0.00 3.27
528 530 8.710835 TTCTGAAACTTTTAAATGTGGTTTCC 57.289 30.769 20.61 11.64 42.59 3.13
529 531 7.841956 TCTGAAACTTTTAAATGTGGTTTCCA 58.158 30.769 20.61 13.78 42.59 3.53
530 532 8.482128 TCTGAAACTTTTAAATGTGGTTTCCAT 58.518 29.630 20.61 1.89 42.59 3.41
531 533 8.430801 TGAAACTTTTAAATGTGGTTTCCATG 57.569 30.769 20.61 0.00 42.59 3.66
532 534 8.260818 TGAAACTTTTAAATGTGGTTTCCATGA 58.739 29.630 20.61 9.61 42.59 3.07
533 535 9.103861 GAAACTTTTAAATGTGGTTTCCATGAA 57.896 29.630 7.44 0.00 39.51 2.57
534 536 8.661352 AACTTTTAAATGTGGTTTCCATGAAG 57.339 30.769 7.44 0.00 35.28 3.02
535 537 7.791029 ACTTTTAAATGTGGTTTCCATGAAGT 58.209 30.769 5.97 0.00 35.28 3.01
536 538 8.264347 ACTTTTAAATGTGGTTTCCATGAAGTT 58.736 29.630 5.97 0.00 35.28 2.66
537 539 9.108284 CTTTTAAATGTGGTTTCCATGAAGTTT 57.892 29.630 0.00 0.00 35.28 2.66
538 540 9.454859 TTTTAAATGTGGTTTCCATGAAGTTTT 57.545 25.926 0.00 0.00 35.28 2.43
539 541 8.655651 TTAAATGTGGTTTCCATGAAGTTTTC 57.344 30.769 0.00 0.00 35.28 2.29
540 542 6.484364 AATGTGGTTTCCATGAAGTTTTCT 57.516 33.333 0.00 0.00 35.28 2.52
541 543 5.930837 TGTGGTTTCCATGAAGTTTTCTT 57.069 34.783 0.00 0.00 38.23 2.52
542 544 6.293004 TGTGGTTTCCATGAAGTTTTCTTT 57.707 33.333 0.00 0.00 36.64 2.52
543 545 6.105333 TGTGGTTTCCATGAAGTTTTCTTTG 58.895 36.000 0.00 0.00 36.64 2.77
544 546 6.071108 TGTGGTTTCCATGAAGTTTTCTTTGA 60.071 34.615 0.00 0.00 36.64 2.69
545 547 6.816140 GTGGTTTCCATGAAGTTTTCTTTGAA 59.184 34.615 0.00 0.00 36.64 2.69
546 548 7.010460 GTGGTTTCCATGAAGTTTTCTTTGAAG 59.990 37.037 0.00 0.00 36.64 3.02
547 549 6.018751 GGTTTCCATGAAGTTTTCTTTGAAGC 60.019 38.462 0.00 0.00 40.61 3.86
548 550 6.469782 TTCCATGAAGTTTTCTTTGAAGCT 57.530 33.333 0.00 0.00 40.61 3.74
549 551 6.469782 TCCATGAAGTTTTCTTTGAAGCTT 57.530 33.333 0.00 0.00 40.61 3.74
550 552 6.275335 TCCATGAAGTTTTCTTTGAAGCTTG 58.725 36.000 2.10 0.00 40.61 4.01
551 553 5.464389 CCATGAAGTTTTCTTTGAAGCTTGG 59.536 40.000 2.10 0.00 40.61 3.61
552 554 5.659440 TGAAGTTTTCTTTGAAGCTTGGT 57.341 34.783 2.10 0.00 40.61 3.67
553 555 6.036577 TGAAGTTTTCTTTGAAGCTTGGTT 57.963 33.333 2.10 0.00 40.61 3.67
554 556 6.463360 TGAAGTTTTCTTTGAAGCTTGGTTT 58.537 32.000 2.10 0.00 40.61 3.27
555 557 6.934083 TGAAGTTTTCTTTGAAGCTTGGTTTT 59.066 30.769 2.10 0.00 40.61 2.43
556 558 7.443879 TGAAGTTTTCTTTGAAGCTTGGTTTTT 59.556 29.630 2.10 0.00 40.61 1.94
557 559 8.840833 AAGTTTTCTTTGAAGCTTGGTTTTTA 57.159 26.923 2.10 0.00 36.67 1.52
558 560 9.448438 AAGTTTTCTTTGAAGCTTGGTTTTTAT 57.552 25.926 2.10 0.00 36.67 1.40
561 563 9.541143 TTTTCTTTGAAGCTTGGTTTTTATAGG 57.459 29.630 2.10 0.00 0.00 2.57
562 564 8.472007 TTCTTTGAAGCTTGGTTTTTATAGGA 57.528 30.769 2.10 0.00 0.00 2.94
563 565 8.650143 TCTTTGAAGCTTGGTTTTTATAGGAT 57.350 30.769 2.10 0.00 0.00 3.24
564 566 9.747898 TCTTTGAAGCTTGGTTTTTATAGGATA 57.252 29.630 2.10 0.00 0.00 2.59
568 570 9.920946 TGAAGCTTGGTTTTTATAGGATATTCT 57.079 29.630 2.10 0.00 0.00 2.40
571 573 9.785982 AGCTTGGTTTTTATAGGATATTCTCTC 57.214 33.333 0.00 0.00 0.00 3.20
572 574 9.004717 GCTTGGTTTTTATAGGATATTCTCTCC 57.995 37.037 0.00 0.00 0.00 3.71
573 575 9.209175 CTTGGTTTTTATAGGATATTCTCTCCG 57.791 37.037 0.00 0.00 37.88 4.63
574 576 7.676947 TGGTTTTTATAGGATATTCTCTCCGG 58.323 38.462 0.00 0.00 37.88 5.14
575 577 7.511371 TGGTTTTTATAGGATATTCTCTCCGGA 59.489 37.037 2.93 2.93 37.88 5.14
576 578 7.818446 GGTTTTTATAGGATATTCTCTCCGGAC 59.182 40.741 0.00 0.00 37.88 4.79
577 579 8.365647 GTTTTTATAGGATATTCTCTCCGGACA 58.634 37.037 0.00 0.00 37.88 4.02
578 580 7.463961 TTTATAGGATATTCTCTCCGGACAC 57.536 40.000 0.00 0.00 37.88 3.67
579 581 2.231529 AGGATATTCTCTCCGGACACG 58.768 52.381 0.00 0.00 37.88 4.49
580 582 1.955080 GGATATTCTCTCCGGACACGT 59.045 52.381 0.00 0.00 38.78 4.49
581 583 2.030981 GGATATTCTCTCCGGACACGTC 60.031 54.545 0.00 0.00 38.78 4.34
582 584 1.012086 TATTCTCTCCGGACACGTCG 58.988 55.000 0.00 0.00 38.78 5.12
675 677 0.941542 TCACGTGTGCCTGCTAAAAC 59.058 50.000 16.51 0.00 0.00 2.43
708 710 6.994221 AGAATATATTCGACGGGACAGATTT 58.006 36.000 17.69 0.00 41.56 2.17
710 712 4.665833 ATATTCGACGGGACAGATTTCA 57.334 40.909 0.00 0.00 0.00 2.69
715 717 2.094700 CGACGGGACAGATTTCAAGAGA 60.095 50.000 0.00 0.00 0.00 3.10
736 738 2.481568 ACTGTGTGCTCGTGATCAATTG 59.518 45.455 0.00 0.00 0.00 2.32
752 754 0.889186 ATTGCTCCGCGTCCAAAAGT 60.889 50.000 4.92 0.00 0.00 2.66
817 820 2.030562 CAAAGGACGGCGGTGTCT 59.969 61.111 13.24 0.00 38.91 3.41
818 821 1.290955 CAAAGGACGGCGGTGTCTA 59.709 57.895 13.24 0.00 38.91 2.59
819 822 1.012486 CAAAGGACGGCGGTGTCTAC 61.012 60.000 13.24 0.00 38.91 2.59
820 823 2.163601 AAAGGACGGCGGTGTCTACC 62.164 60.000 13.24 2.85 43.89 3.18
835 838 0.178068 CTACCAGCGCCATACAACCT 59.822 55.000 2.29 0.00 0.00 3.50
921 932 9.310716 GGAAGTAATTTGCGTCTATAAAGTACT 57.689 33.333 0.00 0.00 44.58 2.73
943 957 7.670605 ACTATCAAATGTGGCTTACTAGGTA 57.329 36.000 0.00 0.00 0.00 3.08
944 958 7.727181 ACTATCAAATGTGGCTTACTAGGTAG 58.273 38.462 0.00 0.00 0.00 3.18
945 959 6.561519 ATCAAATGTGGCTTACTAGGTAGT 57.438 37.500 0.00 0.00 40.24 2.73
1127 1166 0.616111 AGGCCTGACGTCTCCATCTT 60.616 55.000 17.92 0.00 0.00 2.40
1130 1169 2.025155 GCCTGACGTCTCCATCTTCTA 58.975 52.381 17.92 0.00 0.00 2.10
1194 1233 1.402852 CGTGTCATCGTGGTGTCAGAT 60.403 52.381 0.00 0.00 0.00 2.90
1463 1521 3.538591 TCTAGCAATCCTCACTGCATTG 58.461 45.455 0.00 0.00 41.17 2.82
1503 1561 0.382636 GGTTCGTTTGTTGCGTCTCG 60.383 55.000 0.00 0.00 0.00 4.04
1515 1577 0.716108 GCGTCTCGAACATCAGGTTG 59.284 55.000 0.00 0.00 40.63 3.77
1625 1687 4.037565 CAGTCTTTCCCAACAAACTAACCC 59.962 45.833 0.00 0.00 0.00 4.11
1627 1689 3.052793 TCTTTCCCAACAAACTAACCCCA 60.053 43.478 0.00 0.00 0.00 4.96
1629 1691 3.163616 TCCCAACAAACTAACCCCATC 57.836 47.619 0.00 0.00 0.00 3.51
1630 1692 2.719705 TCCCAACAAACTAACCCCATCT 59.280 45.455 0.00 0.00 0.00 2.90
1666 5268 5.345702 GCAAAGATATGCAAAGCAGATTCA 58.654 37.500 0.34 0.00 40.71 2.57
1793 5395 6.554334 TGTACAGTAAGATTTCAAACCTGC 57.446 37.500 0.00 0.00 0.00 4.85
1814 5416 5.847304 TGCGAATATCTAGATGTTCTTGCT 58.153 37.500 28.83 5.03 36.96 3.91
1817 5419 6.309251 GCGAATATCTAGATGTTCTTGCTACC 59.691 42.308 28.83 10.41 36.96 3.18
1832 5434 4.935352 TGCTACCAAGTGAAAGCAAAAT 57.065 36.364 5.41 0.00 41.74 1.82
1833 5435 4.619973 TGCTACCAAGTGAAAGCAAAATG 58.380 39.130 5.41 0.00 41.74 2.32
1834 5436 3.989817 GCTACCAAGTGAAAGCAAAATGG 59.010 43.478 0.00 0.00 35.05 3.16
1835 5437 4.501400 GCTACCAAGTGAAAGCAAAATGGT 60.501 41.667 0.00 0.00 38.90 3.55
1836 5438 5.278758 GCTACCAAGTGAAAGCAAAATGGTA 60.279 40.000 0.00 0.00 37.54 3.25
1837 5439 5.200368 ACCAAGTGAAAGCAAAATGGTAG 57.800 39.130 0.00 0.00 35.78 3.18
1838 5440 4.649218 ACCAAGTGAAAGCAAAATGGTAGT 59.351 37.500 0.00 0.00 35.78 2.73
1839 5441 5.128663 ACCAAGTGAAAGCAAAATGGTAGTT 59.871 36.000 0.00 0.00 35.78 2.24
1840 5442 6.048509 CCAAGTGAAAGCAAAATGGTAGTTT 58.951 36.000 0.00 0.00 0.00 2.66
1841 5443 6.538381 CCAAGTGAAAGCAAAATGGTAGTTTT 59.462 34.615 0.00 0.00 0.00 2.43
1842 5444 7.065683 CCAAGTGAAAGCAAAATGGTAGTTTTT 59.934 33.333 0.00 0.00 0.00 1.94
1864 5466 5.432885 TTTTAAGAGAAGGAGCAAAACGG 57.567 39.130 0.00 0.00 0.00 4.44
1916 5519 3.859411 AGATATCGCCTAGCTTAGTGC 57.141 47.619 0.00 0.00 43.29 4.40
1962 5565 3.577848 AGAACTCTCTGTGCATGAAGTCT 59.422 43.478 0.00 0.00 0.00 3.24
1966 5569 3.657634 TCTCTGTGCATGAAGTCTCAAC 58.342 45.455 0.00 0.00 34.49 3.18
1967 5570 3.323115 TCTCTGTGCATGAAGTCTCAACT 59.677 43.478 0.00 0.00 37.32 3.16
1968 5571 4.524328 TCTCTGTGCATGAAGTCTCAACTA 59.476 41.667 0.00 0.00 33.48 2.24
1974 5577 6.813649 TGTGCATGAAGTCTCAACTAATCTAC 59.186 38.462 0.00 0.00 33.48 2.59
1978 5581 8.191446 GCATGAAGTCTCAACTAATCTACTACA 58.809 37.037 0.00 0.00 33.48 2.74
1979 5582 9.729023 CATGAAGTCTCAACTAATCTACTACAG 57.271 37.037 0.00 0.00 33.48 2.74
1980 5583 8.865420 TGAAGTCTCAACTAATCTACTACAGT 57.135 34.615 0.00 0.00 33.48 3.55
1981 5584 9.955102 TGAAGTCTCAACTAATCTACTACAGTA 57.045 33.333 0.00 0.00 33.48 2.74
1994 5597 8.874744 ATCTACTACAGTAGTAAACACCAAGA 57.125 34.615 19.11 13.09 46.08 3.02
1995 5598 8.332996 TCTACTACAGTAGTAAACACCAAGAG 57.667 38.462 19.11 7.48 46.08 2.85
1996 5599 6.342338 ACTACAGTAGTAAACACCAAGAGG 57.658 41.667 11.84 0.00 37.23 3.69
1999 5602 6.243216 ACAGTAGTAAACACCAAGAGGAAA 57.757 37.500 0.00 0.00 38.69 3.13
2001 5604 5.469084 CAGTAGTAAACACCAAGAGGAAACC 59.531 44.000 0.00 0.00 38.69 3.27
2003 5606 5.061721 AGTAAACACCAAGAGGAAACCAT 57.938 39.130 0.00 0.00 38.69 3.55
2007 5610 4.559862 ACACCAAGAGGAAACCATAGAG 57.440 45.455 0.00 0.00 38.69 2.43
2009 5612 4.785376 ACACCAAGAGGAAACCATAGAGAT 59.215 41.667 0.00 0.00 38.69 2.75
2010 5613 5.121811 CACCAAGAGGAAACCATAGAGATG 58.878 45.833 0.00 0.00 38.69 2.90
2023 5626 0.985490 AGAGATGGAGAGGGGGTTGC 60.985 60.000 0.00 0.00 0.00 4.17
2050 5653 1.523711 GCAAGCCTATGCGGTGCTA 60.524 57.895 12.27 0.00 44.86 3.49
2053 5656 1.622607 AAGCCTATGCGGTGCTACCA 61.623 55.000 6.21 0.00 44.33 3.25
2057 5660 1.571919 CTATGCGGTGCTACCAGTTC 58.428 55.000 6.21 0.00 38.47 3.01
2062 5665 0.108615 CGGTGCTACCAGTTCCTCTG 60.109 60.000 6.21 0.00 38.47 3.35
2093 5696 3.661911 CGTTTTCGCCACATCCCA 58.338 55.556 0.00 0.00 36.22 4.37
2108 5711 0.461548 TCCCACTGCTCATCTTAGCG 59.538 55.000 0.00 0.00 45.85 4.26
2111 5714 0.649475 CACTGCTCATCTTAGCGTGC 59.351 55.000 0.00 0.00 45.85 5.34
2126 5729 0.030504 CGTGCATGCTTTTGACACCA 59.969 50.000 20.33 0.00 0.00 4.17
2127 5730 1.774639 GTGCATGCTTTTGACACCAG 58.225 50.000 20.33 0.00 0.00 4.00
2128 5731 0.675083 TGCATGCTTTTGACACCAGG 59.325 50.000 20.33 0.00 0.00 4.45
2129 5732 0.668401 GCATGCTTTTGACACCAGGC 60.668 55.000 11.37 0.00 0.00 4.85
2130 5733 0.387622 CATGCTTTTGACACCAGGCG 60.388 55.000 0.00 0.00 0.00 5.52
2131 5734 0.537143 ATGCTTTTGACACCAGGCGA 60.537 50.000 0.00 0.00 0.00 5.54
2132 5735 1.165907 TGCTTTTGACACCAGGCGAG 61.166 55.000 0.00 0.00 0.00 5.03
2133 5736 1.576421 CTTTTGACACCAGGCGAGC 59.424 57.895 0.00 0.00 0.00 5.03
2134 5737 1.153066 TTTTGACACCAGGCGAGCA 60.153 52.632 0.00 0.00 0.00 4.26
2135 5738 1.165907 TTTTGACACCAGGCGAGCAG 61.166 55.000 0.00 0.00 0.00 4.24
2151 5754 1.805254 CAGCATGCAGGCTACAACC 59.195 57.895 27.33 0.00 43.68 3.77
2152 5755 1.746615 AGCATGCAGGCTACAACCG 60.747 57.895 26.68 0.00 43.70 4.44
2153 5756 2.764314 GCATGCAGGCTACAACCGG 61.764 63.158 17.57 0.00 33.69 5.28
2170 5773 3.264897 GCGCACGCCCAGATACTG 61.265 66.667 0.30 0.00 34.56 2.74
2183 5786 4.527509 CAGATACTGGATTATGACCGCT 57.472 45.455 0.00 0.00 0.00 5.52
2184 5787 4.489810 CAGATACTGGATTATGACCGCTC 58.510 47.826 0.00 0.00 0.00 5.03
2185 5788 3.191581 AGATACTGGATTATGACCGCTCG 59.808 47.826 0.00 0.00 0.00 5.03
2186 5789 0.389391 ACTGGATTATGACCGCTCGG 59.611 55.000 6.79 6.79 42.03 4.63
2187 5790 0.319900 CTGGATTATGACCGCTCGGG 60.320 60.000 13.31 0.00 43.62 5.14
2188 5791 1.668151 GGATTATGACCGCTCGGGC 60.668 63.158 13.31 10.53 45.60 6.13
2189 5792 1.668151 GATTATGACCGCTCGGGCC 60.668 63.158 12.14 0.00 44.50 5.80
2190 5793 2.377628 GATTATGACCGCTCGGGCCA 62.378 60.000 12.14 9.62 44.50 5.36
2191 5794 2.383245 ATTATGACCGCTCGGGCCAG 62.383 60.000 12.14 0.00 44.50 4.85
2197 5800 4.241555 CGCTCGGGCCAGGCTAAT 62.242 66.667 12.43 0.00 34.44 1.73
2198 5801 2.281139 GCTCGGGCCAGGCTAATC 60.281 66.667 12.43 0.00 0.00 1.75
2199 5802 2.812619 GCTCGGGCCAGGCTAATCT 61.813 63.158 12.43 0.00 0.00 2.40
2200 5803 1.369321 CTCGGGCCAGGCTAATCTC 59.631 63.158 12.43 0.00 0.00 2.75
2201 5804 1.075226 TCGGGCCAGGCTAATCTCT 60.075 57.895 12.43 0.00 0.00 3.10
2202 5805 0.691078 TCGGGCCAGGCTAATCTCTT 60.691 55.000 12.43 0.00 0.00 2.85
2203 5806 0.533755 CGGGCCAGGCTAATCTCTTG 60.534 60.000 12.43 0.00 0.00 3.02
2204 5807 0.821301 GGGCCAGGCTAATCTCTTGC 60.821 60.000 12.43 0.00 0.00 4.01
2205 5808 0.821301 GGCCAGGCTAATCTCTTGCC 60.821 60.000 12.43 0.00 46.42 4.52
2211 5814 1.936547 GGCTAATCTCTTGCCTGAACG 59.063 52.381 0.00 0.00 43.05 3.95
2212 5815 1.936547 GCTAATCTCTTGCCTGAACGG 59.063 52.381 0.00 0.00 0.00 4.44
2213 5816 2.418746 GCTAATCTCTTGCCTGAACGGA 60.419 50.000 0.00 0.00 33.16 4.69
2214 5817 2.100605 AATCTCTTGCCTGAACGGAC 57.899 50.000 0.00 0.00 33.16 4.79
2215 5818 0.976641 ATCTCTTGCCTGAACGGACA 59.023 50.000 0.00 0.00 33.16 4.02
2216 5819 0.033504 TCTCTTGCCTGAACGGACAC 59.966 55.000 0.00 0.00 33.16 3.67
2217 5820 0.951040 CTCTTGCCTGAACGGACACC 60.951 60.000 0.00 0.00 33.16 4.16
2218 5821 1.966451 CTTGCCTGAACGGACACCC 60.966 63.158 0.00 0.00 33.16 4.61
2228 5831 3.365265 GGACACCCGGCAAGCAAG 61.365 66.667 0.00 0.00 0.00 4.01
2229 5832 4.043200 GACACCCGGCAAGCAAGC 62.043 66.667 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
170 172 4.517285 TGGCTTCCATGTGATACTTTCTC 58.483 43.478 0.00 0.00 0.00 2.87
171 173 4.574674 TGGCTTCCATGTGATACTTTCT 57.425 40.909 0.00 0.00 0.00 2.52
172 174 4.702131 ACTTGGCTTCCATGTGATACTTTC 59.298 41.667 3.92 0.00 39.83 2.62
173 175 4.666512 ACTTGGCTTCCATGTGATACTTT 58.333 39.130 3.92 0.00 39.83 2.66
174 176 4.307032 ACTTGGCTTCCATGTGATACTT 57.693 40.909 3.92 0.00 39.83 2.24
175 177 4.307032 AACTTGGCTTCCATGTGATACT 57.693 40.909 5.33 0.00 40.31 2.12
176 178 5.391312 AAAACTTGGCTTCCATGTGATAC 57.609 39.130 5.33 0.00 40.31 2.24
177 179 6.150976 CACTAAAACTTGGCTTCCATGTGATA 59.849 38.462 5.33 2.49 40.31 2.15
178 180 5.047802 CACTAAAACTTGGCTTCCATGTGAT 60.048 40.000 5.33 1.60 40.31 3.06
179 181 4.278170 CACTAAAACTTGGCTTCCATGTGA 59.722 41.667 5.33 0.00 40.31 3.58
180 182 4.549458 CACTAAAACTTGGCTTCCATGTG 58.451 43.478 5.33 0.00 40.31 3.21
181 183 3.573967 CCACTAAAACTTGGCTTCCATGT 59.426 43.478 0.00 0.00 42.50 3.21
182 184 3.826157 TCCACTAAAACTTGGCTTCCATG 59.174 43.478 0.00 0.00 35.21 3.66
183 185 4.112634 TCCACTAAAACTTGGCTTCCAT 57.887 40.909 0.00 0.00 31.53 3.41
184 186 3.586470 TCCACTAAAACTTGGCTTCCA 57.414 42.857 0.00 0.00 0.00 3.53
185 187 4.500887 GGTTTCCACTAAAACTTGGCTTCC 60.501 45.833 0.00 0.00 38.81 3.46
186 188 4.617959 GGTTTCCACTAAAACTTGGCTTC 58.382 43.478 0.00 0.00 38.81 3.86
187 189 3.067601 CGGTTTCCACTAAAACTTGGCTT 59.932 43.478 0.00 0.00 38.81 4.35
188 190 2.621526 CGGTTTCCACTAAAACTTGGCT 59.378 45.455 0.00 0.00 38.81 4.75
189 191 2.287970 CCGGTTTCCACTAAAACTTGGC 60.288 50.000 0.00 0.00 38.81 4.52
190 192 2.953648 ACCGGTTTCCACTAAAACTTGG 59.046 45.455 0.00 8.66 38.81 3.61
191 193 3.628487 TCACCGGTTTCCACTAAAACTTG 59.372 43.478 2.97 0.00 38.81 3.16
192 194 3.888583 TCACCGGTTTCCACTAAAACTT 58.111 40.909 2.97 0.00 38.81 2.66
193 195 3.564053 TCACCGGTTTCCACTAAAACT 57.436 42.857 2.97 0.00 38.81 2.66
194 196 4.635833 TTTCACCGGTTTCCACTAAAAC 57.364 40.909 2.97 0.00 38.21 2.43
195 197 4.142204 GGTTTTCACCGGTTTCCACTAAAA 60.142 41.667 2.97 0.75 31.60 1.52
196 198 3.380954 GGTTTTCACCGGTTTCCACTAAA 59.619 43.478 2.97 0.00 31.60 1.85
197 199 2.950975 GGTTTTCACCGGTTTCCACTAA 59.049 45.455 2.97 0.00 31.60 2.24
198 200 2.574450 GGTTTTCACCGGTTTCCACTA 58.426 47.619 2.97 0.00 31.60 2.74
199 201 1.395635 GGTTTTCACCGGTTTCCACT 58.604 50.000 2.97 0.00 31.60 4.00
200 202 3.951115 GGTTTTCACCGGTTTCCAC 57.049 52.632 2.97 0.00 31.60 4.02
209 211 5.990996 ACATCATTTTCATGTGGTTTTCACC 59.009 36.000 0.00 0.00 45.48 4.02
210 212 7.481275 AACATCATTTTCATGTGGTTTTCAC 57.519 32.000 0.00 0.00 46.23 3.18
211 213 8.503458 AAAACATCATTTTCATGTGGTTTTCA 57.497 26.923 0.00 0.00 40.09 2.69
215 217 9.612066 ACTTTAAAACATCATTTTCATGTGGTT 57.388 25.926 0.00 0.00 34.59 3.67
216 218 9.612066 AACTTTAAAACATCATTTTCATGTGGT 57.388 25.926 0.00 0.00 34.59 4.16
258 260 7.925993 TCACATTCTTAACGTCTCACATTTTT 58.074 30.769 0.00 0.00 0.00 1.94
259 261 7.490962 TCACATTCTTAACGTCTCACATTTT 57.509 32.000 0.00 0.00 0.00 1.82
260 262 7.173218 ACATCACATTCTTAACGTCTCACATTT 59.827 33.333 0.00 0.00 0.00 2.32
261 263 6.650807 ACATCACATTCTTAACGTCTCACATT 59.349 34.615 0.00 0.00 0.00 2.71
262 264 6.166279 ACATCACATTCTTAACGTCTCACAT 58.834 36.000 0.00 0.00 0.00 3.21
263 265 5.538118 ACATCACATTCTTAACGTCTCACA 58.462 37.500 0.00 0.00 0.00 3.58
264 266 6.366332 AGAACATCACATTCTTAACGTCTCAC 59.634 38.462 0.00 0.00 32.32 3.51
265 267 6.455647 AGAACATCACATTCTTAACGTCTCA 58.544 36.000 0.00 0.00 32.32 3.27
266 268 6.952935 AGAACATCACATTCTTAACGTCTC 57.047 37.500 0.00 0.00 32.32 3.36
269 271 9.095065 GGTAATAGAACATCACATTCTTAACGT 57.905 33.333 0.00 0.00 37.57 3.99
270 272 9.093970 TGGTAATAGAACATCACATTCTTAACG 57.906 33.333 0.00 0.00 37.57 3.18
274 276 8.896744 CACATGGTAATAGAACATCACATTCTT 58.103 33.333 0.00 0.00 37.57 2.52
275 277 8.267183 TCACATGGTAATAGAACATCACATTCT 58.733 33.333 0.00 0.00 39.70 2.40
276 278 8.437360 TCACATGGTAATAGAACATCACATTC 57.563 34.615 0.00 0.00 0.00 2.67
277 279 8.806429 TTCACATGGTAATAGAACATCACATT 57.194 30.769 0.00 0.00 0.00 2.71
278 280 8.806429 TTTCACATGGTAATAGAACATCACAT 57.194 30.769 0.00 0.00 0.00 3.21
279 281 8.806429 ATTTCACATGGTAATAGAACATCACA 57.194 30.769 0.00 0.00 0.00 3.58
282 284 9.736023 GGAAATTTCACATGGTAATAGAACATC 57.264 33.333 19.49 0.00 0.00 3.06
283 285 9.253832 TGGAAATTTCACATGGTAATAGAACAT 57.746 29.630 19.49 0.00 0.00 2.71
284 286 8.642935 TGGAAATTTCACATGGTAATAGAACA 57.357 30.769 19.49 0.18 0.00 3.18
285 287 9.921637 TTTGGAAATTTCACATGGTAATAGAAC 57.078 29.630 19.49 0.00 0.00 3.01
290 292 9.790344 TTGAATTTGGAAATTTCACATGGTAAT 57.210 25.926 19.49 8.75 43.41 1.89
291 293 9.618890 TTTGAATTTGGAAATTTCACATGGTAA 57.381 25.926 19.49 7.10 43.41 2.85
292 294 9.050601 GTTTGAATTTGGAAATTTCACATGGTA 57.949 29.630 19.49 0.00 43.41 3.25
293 295 7.555554 TGTTTGAATTTGGAAATTTCACATGGT 59.444 29.630 19.49 0.35 43.41 3.55
294 296 7.856894 GTGTTTGAATTTGGAAATTTCACATGG 59.143 33.333 19.49 0.00 43.41 3.66
295 297 8.396390 TGTGTTTGAATTTGGAAATTTCACATG 58.604 29.630 19.49 0.00 43.41 3.21
296 298 8.503458 TGTGTTTGAATTTGGAAATTTCACAT 57.497 26.923 19.49 5.49 43.41 3.21
297 299 7.912056 TGTGTTTGAATTTGGAAATTTCACA 57.088 28.000 19.49 11.95 43.41 3.58
300 302 9.597999 GCTAATGTGTTTGAATTTGGAAATTTC 57.402 29.630 9.83 9.83 38.64 2.17
301 303 9.118300 TGCTAATGTGTTTGAATTTGGAAATTT 57.882 25.926 0.00 0.00 38.64 1.82
302 304 8.674263 TGCTAATGTGTTTGAATTTGGAAATT 57.326 26.923 0.00 0.00 41.06 1.82
303 305 8.851541 ATGCTAATGTGTTTGAATTTGGAAAT 57.148 26.923 0.00 0.00 0.00 2.17
304 306 8.674263 AATGCTAATGTGTTTGAATTTGGAAA 57.326 26.923 0.00 0.00 0.00 3.13
305 307 8.674263 AAATGCTAATGTGTTTGAATTTGGAA 57.326 26.923 0.00 0.00 30.35 3.53
306 308 9.202273 GTAAATGCTAATGTGTTTGAATTTGGA 57.798 29.630 0.00 0.00 32.73 3.53
307 309 8.161610 CGTAAATGCTAATGTGTTTGAATTTGG 58.838 33.333 0.00 0.00 32.73 3.28
308 310 8.910666 TCGTAAATGCTAATGTGTTTGAATTTG 58.089 29.630 0.00 0.00 32.73 2.32
309 311 9.128107 CTCGTAAATGCTAATGTGTTTGAATTT 57.872 29.630 0.00 0.00 34.24 1.82
310 312 7.273381 GCTCGTAAATGCTAATGTGTTTGAATT 59.727 33.333 0.00 0.00 0.00 2.17
311 313 6.747280 GCTCGTAAATGCTAATGTGTTTGAAT 59.253 34.615 0.00 0.00 0.00 2.57
312 314 6.072728 AGCTCGTAAATGCTAATGTGTTTGAA 60.073 34.615 0.00 0.00 37.81 2.69
313 315 5.411361 AGCTCGTAAATGCTAATGTGTTTGA 59.589 36.000 0.00 0.00 37.81 2.69
314 316 5.631026 AGCTCGTAAATGCTAATGTGTTTG 58.369 37.500 0.00 0.00 37.81 2.93
315 317 5.880054 AGCTCGTAAATGCTAATGTGTTT 57.120 34.783 0.00 0.00 37.81 2.83
316 318 5.293569 GGTAGCTCGTAAATGCTAATGTGTT 59.706 40.000 0.00 0.00 42.45 3.32
317 319 4.809426 GGTAGCTCGTAAATGCTAATGTGT 59.191 41.667 0.00 0.00 42.45 3.72
318 320 4.808895 TGGTAGCTCGTAAATGCTAATGTG 59.191 41.667 0.00 0.00 42.45 3.21
319 321 5.018539 TGGTAGCTCGTAAATGCTAATGT 57.981 39.130 0.00 0.00 42.45 2.71
320 322 5.984233 TTGGTAGCTCGTAAATGCTAATG 57.016 39.130 0.00 0.00 42.45 1.90
321 323 6.995511 TTTTGGTAGCTCGTAAATGCTAAT 57.004 33.333 0.00 0.00 42.45 1.73
322 324 6.804770 TTTTTGGTAGCTCGTAAATGCTAA 57.195 33.333 0.00 0.00 42.45 3.09
345 347 9.567848 CGGCACTATTTAATACTGATTTTGTTT 57.432 29.630 0.00 0.00 0.00 2.83
346 348 8.952278 TCGGCACTATTTAATACTGATTTTGTT 58.048 29.630 0.00 0.00 0.00 2.83
347 349 8.395633 GTCGGCACTATTTAATACTGATTTTGT 58.604 33.333 0.00 0.00 0.00 2.83
348 350 7.855904 GGTCGGCACTATTTAATACTGATTTTG 59.144 37.037 0.00 0.00 0.00 2.44
349 351 7.554835 TGGTCGGCACTATTTAATACTGATTTT 59.445 33.333 0.00 0.00 0.00 1.82
350 352 7.051623 TGGTCGGCACTATTTAATACTGATTT 58.948 34.615 0.00 0.00 0.00 2.17
351 353 6.588204 TGGTCGGCACTATTTAATACTGATT 58.412 36.000 0.00 0.00 0.00 2.57
352 354 6.169557 TGGTCGGCACTATTTAATACTGAT 57.830 37.500 0.00 0.00 0.00 2.90
353 355 5.128171 ACTGGTCGGCACTATTTAATACTGA 59.872 40.000 0.00 0.00 0.00 3.41
354 356 5.357257 ACTGGTCGGCACTATTTAATACTG 58.643 41.667 0.00 0.00 0.00 2.74
355 357 5.609533 ACTGGTCGGCACTATTTAATACT 57.390 39.130 0.00 0.00 0.00 2.12
356 358 6.199719 GTGTACTGGTCGGCACTATTTAATAC 59.800 42.308 0.00 0.00 0.00 1.89
357 359 6.127394 TGTGTACTGGTCGGCACTATTTAATA 60.127 38.462 0.00 0.00 33.44 0.98
358 360 5.114081 GTGTACTGGTCGGCACTATTTAAT 58.886 41.667 0.00 0.00 0.00 1.40
359 361 4.021280 TGTGTACTGGTCGGCACTATTTAA 60.021 41.667 0.00 0.00 33.44 1.52
360 362 3.510753 TGTGTACTGGTCGGCACTATTTA 59.489 43.478 0.00 0.00 33.44 1.40
361 363 2.300723 TGTGTACTGGTCGGCACTATTT 59.699 45.455 0.00 0.00 33.44 1.40
362 364 1.897133 TGTGTACTGGTCGGCACTATT 59.103 47.619 0.00 0.00 33.44 1.73
363 365 1.552578 TGTGTACTGGTCGGCACTAT 58.447 50.000 0.00 0.00 33.44 2.12
364 366 1.475280 GATGTGTACTGGTCGGCACTA 59.525 52.381 0.00 0.00 33.44 2.74
365 367 0.246635 GATGTGTACTGGTCGGCACT 59.753 55.000 0.00 0.00 33.44 4.40
366 368 0.037697 TGATGTGTACTGGTCGGCAC 60.038 55.000 0.00 0.00 0.00 5.01
367 369 0.037697 GTGATGTGTACTGGTCGGCA 60.038 55.000 0.00 0.00 0.00 5.69
368 370 0.246635 AGTGATGTGTACTGGTCGGC 59.753 55.000 0.00 0.00 0.00 5.54
369 371 4.142249 TGAATAGTGATGTGTACTGGTCGG 60.142 45.833 0.00 0.00 0.00 4.79
370 372 4.993905 TGAATAGTGATGTGTACTGGTCG 58.006 43.478 0.00 0.00 0.00 4.79
371 373 6.238211 GCAATGAATAGTGATGTGTACTGGTC 60.238 42.308 0.00 0.00 0.00 4.02
372 374 5.586243 GCAATGAATAGTGATGTGTACTGGT 59.414 40.000 0.00 0.00 0.00 4.00
373 375 5.819379 AGCAATGAATAGTGATGTGTACTGG 59.181 40.000 0.00 0.00 0.00 4.00
374 376 6.915544 AGCAATGAATAGTGATGTGTACTG 57.084 37.500 0.00 0.00 0.00 2.74
375 377 9.618890 ATTTAGCAATGAATAGTGATGTGTACT 57.381 29.630 0.00 0.00 0.00 2.73
378 380 9.577110 CAAATTTAGCAATGAATAGTGATGTGT 57.423 29.630 0.00 0.00 0.00 3.72
379 381 9.577110 ACAAATTTAGCAATGAATAGTGATGTG 57.423 29.630 0.00 0.00 0.00 3.21
391 393 9.962759 GCTATGAAAAGAACAAATTTAGCAATG 57.037 29.630 0.00 0.00 0.00 2.82
392 394 9.933723 AGCTATGAAAAGAACAAATTTAGCAAT 57.066 25.926 0.00 0.00 0.00 3.56
393 395 9.410556 GAGCTATGAAAAGAACAAATTTAGCAA 57.589 29.630 0.00 0.00 0.00 3.91
394 396 7.750458 CGAGCTATGAAAAGAACAAATTTAGCA 59.250 33.333 0.00 0.00 0.00 3.49
395 397 7.750903 ACGAGCTATGAAAAGAACAAATTTAGC 59.249 33.333 0.00 0.00 0.00 3.09
398 400 9.959749 TTTACGAGCTATGAAAAGAACAAATTT 57.040 25.926 0.00 0.00 0.00 1.82
400 402 9.559958 CATTTACGAGCTATGAAAAGAACAAAT 57.440 29.630 0.00 0.00 0.00 2.32
401 403 8.020819 CCATTTACGAGCTATGAAAAGAACAAA 58.979 33.333 0.00 0.00 0.00 2.83
402 404 7.174253 ACCATTTACGAGCTATGAAAAGAACAA 59.826 33.333 0.00 0.00 0.00 2.83
403 405 6.653320 ACCATTTACGAGCTATGAAAAGAACA 59.347 34.615 0.00 0.00 0.00 3.18
404 406 7.073342 ACCATTTACGAGCTATGAAAAGAAC 57.927 36.000 0.00 0.00 0.00 3.01
405 407 8.780846 TTACCATTTACGAGCTATGAAAAGAA 57.219 30.769 0.00 0.00 0.00 2.52
406 408 8.826710 CATTACCATTTACGAGCTATGAAAAGA 58.173 33.333 0.00 0.00 0.00 2.52
407 409 8.612619 ACATTACCATTTACGAGCTATGAAAAG 58.387 33.333 0.00 0.00 0.00 2.27
408 410 8.394877 CACATTACCATTTACGAGCTATGAAAA 58.605 33.333 0.00 0.00 0.00 2.29
409 411 7.551262 ACACATTACCATTTACGAGCTATGAAA 59.449 33.333 0.00 0.00 0.00 2.69
410 412 7.045416 ACACATTACCATTTACGAGCTATGAA 58.955 34.615 0.00 0.00 0.00 2.57
411 413 6.578944 ACACATTACCATTTACGAGCTATGA 58.421 36.000 0.00 0.00 0.00 2.15
412 414 6.844696 ACACATTACCATTTACGAGCTATG 57.155 37.500 0.00 0.00 0.00 2.23
413 415 7.551262 TCAAACACATTACCATTTACGAGCTAT 59.449 33.333 0.00 0.00 0.00 2.97
414 416 6.874664 TCAAACACATTACCATTTACGAGCTA 59.125 34.615 0.00 0.00 0.00 3.32
415 417 5.703592 TCAAACACATTACCATTTACGAGCT 59.296 36.000 0.00 0.00 0.00 4.09
416 418 5.933790 TCAAACACATTACCATTTACGAGC 58.066 37.500 0.00 0.00 0.00 5.03
417 419 7.581476 AGTTCAAACACATTACCATTTACGAG 58.419 34.615 0.00 0.00 0.00 4.18
418 420 7.499321 AGTTCAAACACATTACCATTTACGA 57.501 32.000 0.00 0.00 0.00 3.43
419 421 7.858382 TGAAGTTCAAACACATTACCATTTACG 59.142 33.333 2.20 0.00 0.00 3.18
420 422 9.522804 TTGAAGTTCAAACACATTACCATTTAC 57.477 29.630 15.92 0.00 32.71 2.01
422 424 9.442047 TTTTGAAGTTCAAACACATTACCATTT 57.558 25.926 26.72 0.00 45.03 2.32
423 425 9.612066 ATTTTGAAGTTCAAACACATTACCATT 57.388 25.926 26.72 0.48 45.03 3.16
424 426 9.612066 AATTTTGAAGTTCAAACACATTACCAT 57.388 25.926 26.72 13.63 45.03 3.55
425 427 9.442047 AAATTTTGAAGTTCAAACACATTACCA 57.558 25.926 26.72 12.11 45.03 3.25
430 432 9.991388 CATGAAAATTTTGAAGTTCAAACACAT 57.009 25.926 26.72 21.57 45.03 3.21
431 433 7.961827 GCATGAAAATTTTGAAGTTCAAACACA 59.038 29.630 26.72 20.63 45.03 3.72
432 434 7.429051 GGCATGAAAATTTTGAAGTTCAAACAC 59.571 33.333 26.72 16.88 45.03 3.32
433 435 7.120285 TGGCATGAAAATTTTGAAGTTCAAACA 59.880 29.630 26.72 21.01 45.03 2.83
434 436 7.470900 TGGCATGAAAATTTTGAAGTTCAAAC 58.529 30.769 26.72 16.80 45.03 2.93
435 437 7.621428 TGGCATGAAAATTTTGAAGTTCAAA 57.379 28.000 23.91 23.91 43.84 2.69
436 438 7.621428 TTGGCATGAAAATTTTGAAGTTCAA 57.379 28.000 14.35 14.35 33.93 2.69
437 439 7.804843 ATTGGCATGAAAATTTTGAAGTTCA 57.195 28.000 8.47 0.08 34.68 3.18
438 440 9.206870 TCTATTGGCATGAAAATTTTGAAGTTC 57.793 29.630 8.47 0.00 0.00 3.01
439 441 9.558396 TTCTATTGGCATGAAAATTTTGAAGTT 57.442 25.926 8.47 0.00 0.00 2.66
440 442 8.992073 GTTCTATTGGCATGAAAATTTTGAAGT 58.008 29.630 8.47 0.00 0.00 3.01
441 443 8.991026 TGTTCTATTGGCATGAAAATTTTGAAG 58.009 29.630 8.47 0.00 0.00 3.02
442 444 8.899427 TGTTCTATTGGCATGAAAATTTTGAA 57.101 26.923 8.47 0.00 0.00 2.69
443 445 9.153721 GATGTTCTATTGGCATGAAAATTTTGA 57.846 29.630 8.47 0.00 0.00 2.69
444 446 8.937884 TGATGTTCTATTGGCATGAAAATTTTG 58.062 29.630 8.47 0.00 0.00 2.44
445 447 8.938906 GTGATGTTCTATTGGCATGAAAATTTT 58.061 29.630 2.28 2.28 0.00 1.82
446 448 7.276218 CGTGATGTTCTATTGGCATGAAAATTT 59.724 33.333 0.00 0.00 0.00 1.82
447 449 6.753279 CGTGATGTTCTATTGGCATGAAAATT 59.247 34.615 0.00 0.00 0.00 1.82
448 450 6.267817 CGTGATGTTCTATTGGCATGAAAAT 58.732 36.000 0.00 0.00 0.00 1.82
449 451 5.639757 CGTGATGTTCTATTGGCATGAAAA 58.360 37.500 0.00 0.00 0.00 2.29
450 452 4.438608 GCGTGATGTTCTATTGGCATGAAA 60.439 41.667 0.00 0.00 0.00 2.69
451 453 3.065233 GCGTGATGTTCTATTGGCATGAA 59.935 43.478 0.00 0.00 0.00 2.57
452 454 2.613595 GCGTGATGTTCTATTGGCATGA 59.386 45.455 0.00 0.00 0.00 3.07
453 455 2.615447 AGCGTGATGTTCTATTGGCATG 59.385 45.455 0.00 0.00 0.00 4.06
454 456 2.874701 GAGCGTGATGTTCTATTGGCAT 59.125 45.455 0.00 0.00 0.00 4.40
455 457 2.093500 AGAGCGTGATGTTCTATTGGCA 60.093 45.455 0.00 0.00 36.24 4.92
456 458 2.555199 AGAGCGTGATGTTCTATTGGC 58.445 47.619 0.00 0.00 36.24 4.52
457 459 5.580691 TGTTAAGAGCGTGATGTTCTATTGG 59.419 40.000 0.00 0.00 37.13 3.16
458 460 6.647212 TGTTAAGAGCGTGATGTTCTATTG 57.353 37.500 0.00 0.00 37.13 1.90
459 461 6.480320 GGATGTTAAGAGCGTGATGTTCTATT 59.520 38.462 0.00 0.00 37.13 1.73
460 462 5.986135 GGATGTTAAGAGCGTGATGTTCTAT 59.014 40.000 0.00 0.00 37.13 1.98
461 463 5.127194 AGGATGTTAAGAGCGTGATGTTCTA 59.873 40.000 0.00 0.00 37.13 2.10
462 464 4.081420 AGGATGTTAAGAGCGTGATGTTCT 60.081 41.667 0.00 0.00 40.24 3.01
463 465 4.184629 AGGATGTTAAGAGCGTGATGTTC 58.815 43.478 0.00 0.00 0.00 3.18
464 466 4.207891 AGGATGTTAAGAGCGTGATGTT 57.792 40.909 0.00 0.00 0.00 2.71
465 467 3.895232 AGGATGTTAAGAGCGTGATGT 57.105 42.857 0.00 0.00 0.00 3.06
466 468 8.539770 AAATATAGGATGTTAAGAGCGTGATG 57.460 34.615 0.00 0.00 0.00 3.07
467 469 9.561069 AAAAATATAGGATGTTAAGAGCGTGAT 57.439 29.630 0.00 0.00 0.00 3.06
468 470 8.958119 AAAAATATAGGATGTTAAGAGCGTGA 57.042 30.769 0.00 0.00 0.00 4.35
469 471 9.046296 AGAAAAATATAGGATGTTAAGAGCGTG 57.954 33.333 0.00 0.00 0.00 5.34
470 472 9.262358 GAGAAAAATATAGGATGTTAAGAGCGT 57.738 33.333 0.00 0.00 0.00 5.07
471 473 9.261180 TGAGAAAAATATAGGATGTTAAGAGCG 57.739 33.333 0.00 0.00 0.00 5.03
502 504 9.157104 GGAAACCACATTTAAAAGTTTCAGAAA 57.843 29.630 23.37 0.00 45.08 2.52
503 505 8.314751 TGGAAACCACATTTAAAAGTTTCAGAA 58.685 29.630 23.37 13.78 45.08 3.02
504 506 7.841956 TGGAAACCACATTTAAAAGTTTCAGA 58.158 30.769 23.37 14.32 45.08 3.27
505 507 8.550376 CATGGAAACCACATTTAAAAGTTTCAG 58.450 33.333 23.37 15.33 45.08 3.02
506 508 8.260818 TCATGGAAACCACATTTAAAAGTTTCA 58.739 29.630 23.37 15.96 45.08 2.69
507 509 8.655651 TCATGGAAACCACATTTAAAAGTTTC 57.344 30.769 18.58 18.58 43.44 2.78
508 510 9.108284 CTTCATGGAAACCACATTTAAAAGTTT 57.892 29.630 8.06 8.06 35.80 2.66
509 511 8.264347 ACTTCATGGAAACCACATTTAAAAGTT 58.736 29.630 0.00 0.00 35.80 2.66
510 512 7.791029 ACTTCATGGAAACCACATTTAAAAGT 58.209 30.769 0.00 0.00 35.80 2.66
511 513 8.661352 AACTTCATGGAAACCACATTTAAAAG 57.339 30.769 0.00 0.00 35.80 2.27
512 514 9.454859 AAAACTTCATGGAAACCACATTTAAAA 57.545 25.926 0.00 0.00 35.80 1.52
513 515 9.103861 GAAAACTTCATGGAAACCACATTTAAA 57.896 29.630 0.00 0.00 35.80 1.52
514 516 8.482128 AGAAAACTTCATGGAAACCACATTTAA 58.518 29.630 0.00 0.00 35.80 1.52
515 517 8.017418 AGAAAACTTCATGGAAACCACATTTA 57.983 30.769 0.00 0.00 35.80 1.40
516 518 6.888105 AGAAAACTTCATGGAAACCACATTT 58.112 32.000 0.00 0.00 35.80 2.32
517 519 6.484364 AGAAAACTTCATGGAAACCACATT 57.516 33.333 0.00 0.00 35.80 2.71
518 520 6.484364 AAGAAAACTTCATGGAAACCACAT 57.516 33.333 0.00 0.00 35.80 3.21
519 521 5.930837 AAGAAAACTTCATGGAAACCACA 57.069 34.783 0.00 0.00 35.80 4.17
520 522 6.337356 TCAAAGAAAACTTCATGGAAACCAC 58.663 36.000 0.00 0.00 35.80 4.16
521 523 6.537453 TCAAAGAAAACTTCATGGAAACCA 57.463 33.333 0.00 0.00 38.19 3.67
522 524 6.018751 GCTTCAAAGAAAACTTCATGGAAACC 60.019 38.462 0.00 0.00 0.00 3.27
523 525 6.758416 AGCTTCAAAGAAAACTTCATGGAAAC 59.242 34.615 0.00 0.00 0.00 2.78
524 526 6.877236 AGCTTCAAAGAAAACTTCATGGAAA 58.123 32.000 0.00 0.00 0.00 3.13
525 527 6.469782 AGCTTCAAAGAAAACTTCATGGAA 57.530 33.333 0.00 0.00 0.00 3.53
526 528 6.275335 CAAGCTTCAAAGAAAACTTCATGGA 58.725 36.000 0.00 0.00 0.00 3.41
527 529 5.464389 CCAAGCTTCAAAGAAAACTTCATGG 59.536 40.000 0.00 0.00 0.00 3.66
528 530 6.044682 ACCAAGCTTCAAAGAAAACTTCATG 58.955 36.000 0.00 0.00 0.00 3.07
529 531 6.225981 ACCAAGCTTCAAAGAAAACTTCAT 57.774 33.333 0.00 0.00 0.00 2.57
530 532 5.659440 ACCAAGCTTCAAAGAAAACTTCA 57.341 34.783 0.00 0.00 0.00 3.02
531 533 6.968131 AAACCAAGCTTCAAAGAAAACTTC 57.032 33.333 0.00 0.00 0.00 3.01
532 534 7.744087 AAAAACCAAGCTTCAAAGAAAACTT 57.256 28.000 0.00 0.00 0.00 2.66
535 537 9.541143 CCTATAAAAACCAAGCTTCAAAGAAAA 57.459 29.630 0.00 0.00 0.00 2.29
536 538 8.919145 TCCTATAAAAACCAAGCTTCAAAGAAA 58.081 29.630 0.00 0.00 0.00 2.52
537 539 8.472007 TCCTATAAAAACCAAGCTTCAAAGAA 57.528 30.769 0.00 0.00 0.00 2.52
538 540 8.650143 ATCCTATAAAAACCAAGCTTCAAAGA 57.350 30.769 0.00 0.00 0.00 2.52
542 544 9.920946 AGAATATCCTATAAAAACCAAGCTTCA 57.079 29.630 0.00 0.00 0.00 3.02
545 547 9.785982 GAGAGAATATCCTATAAAAACCAAGCT 57.214 33.333 0.00 0.00 0.00 3.74
546 548 9.004717 GGAGAGAATATCCTATAAAAACCAAGC 57.995 37.037 0.00 0.00 33.77 4.01
547 549 9.209175 CGGAGAGAATATCCTATAAAAACCAAG 57.791 37.037 0.00 0.00 34.45 3.61
548 550 8.154856 CCGGAGAGAATATCCTATAAAAACCAA 58.845 37.037 0.00 0.00 34.45 3.67
549 551 7.511371 TCCGGAGAGAATATCCTATAAAAACCA 59.489 37.037 0.00 0.00 34.45 3.67
550 552 7.818446 GTCCGGAGAGAATATCCTATAAAAACC 59.182 40.741 3.06 0.00 34.45 3.27
551 553 8.365647 TGTCCGGAGAGAATATCCTATAAAAAC 58.634 37.037 3.06 0.00 34.45 2.43
552 554 8.365647 GTGTCCGGAGAGAATATCCTATAAAAA 58.634 37.037 3.06 0.00 34.45 1.94
553 555 7.309012 CGTGTCCGGAGAGAATATCCTATAAAA 60.309 40.741 3.06 0.00 34.45 1.52
554 556 6.150641 CGTGTCCGGAGAGAATATCCTATAAA 59.849 42.308 3.06 0.00 34.45 1.40
555 557 5.646793 CGTGTCCGGAGAGAATATCCTATAA 59.353 44.000 3.06 0.00 34.45 0.98
556 558 5.183969 CGTGTCCGGAGAGAATATCCTATA 58.816 45.833 3.06 0.00 34.45 1.31
557 559 4.011023 CGTGTCCGGAGAGAATATCCTAT 58.989 47.826 3.06 0.00 34.45 2.57
558 560 3.181447 ACGTGTCCGGAGAGAATATCCTA 60.181 47.826 3.06 0.00 38.78 2.94
559 561 2.231529 CGTGTCCGGAGAGAATATCCT 58.768 52.381 3.06 0.00 34.45 3.24
560 562 1.955080 ACGTGTCCGGAGAGAATATCC 59.045 52.381 3.06 0.00 38.78 2.59
561 563 2.349627 CGACGTGTCCGGAGAGAATATC 60.350 54.545 3.06 0.00 38.78 1.63
562 564 1.602851 CGACGTGTCCGGAGAGAATAT 59.397 52.381 3.06 0.00 38.78 1.28
563 565 1.012086 CGACGTGTCCGGAGAGAATA 58.988 55.000 3.06 0.00 38.78 1.75
564 566 1.801332 CGACGTGTCCGGAGAGAAT 59.199 57.895 3.06 0.00 38.78 2.40
565 567 3.260931 CGACGTGTCCGGAGAGAA 58.739 61.111 3.06 0.00 38.78 2.87
572 574 2.126965 GTCTGACCGACGTGTCCG 60.127 66.667 0.00 7.48 40.83 4.79
573 575 2.257676 GGTCTGACCGACGTGTCC 59.742 66.667 11.71 0.00 43.79 4.02
574 576 2.257676 GGGTCTGACCGACGTGTC 59.742 66.667 19.98 0.00 43.79 3.67
575 577 2.520020 TGGGTCTGACCGACGTGT 60.520 61.111 19.98 0.00 43.79 4.49
576 578 2.049433 GTGGGTCTGACCGACGTG 60.049 66.667 23.27 0.00 43.79 4.49
577 579 3.300765 GGTGGGTCTGACCGACGT 61.301 66.667 28.17 0.00 46.40 4.34
598 600 7.576861 AAAACGAAATGGAAAAGTTCTCCTA 57.423 32.000 0.00 0.00 33.77 2.94
675 677 6.183359 CCCGTCGAATATATTCTTGTGATTCG 60.183 42.308 20.47 9.02 46.34 3.34
696 698 2.900546 AGTCTCTTGAAATCTGTCCCGT 59.099 45.455 0.00 0.00 0.00 5.28
708 710 1.032794 ACGAGCACACAGTCTCTTGA 58.967 50.000 0.00 0.00 0.00 3.02
710 712 1.032794 TCACGAGCACACAGTCTCTT 58.967 50.000 0.00 0.00 0.00 2.85
715 717 2.462456 ATTGATCACGAGCACACAGT 57.538 45.000 0.00 0.00 0.00 3.55
752 754 3.921104 ACTAGGAGAGGAGATCATGCAA 58.079 45.455 0.00 0.00 0.00 4.08
817 820 1.487300 TAGGTTGTATGGCGCTGGTA 58.513 50.000 7.64 0.00 0.00 3.25
818 821 0.837272 ATAGGTTGTATGGCGCTGGT 59.163 50.000 7.64 0.00 0.00 4.00
819 822 1.512926 GATAGGTTGTATGGCGCTGG 58.487 55.000 7.64 0.00 0.00 4.85
820 823 1.139989 CGATAGGTTGTATGGCGCTG 58.860 55.000 7.64 0.00 0.00 5.18
821 824 0.750850 ACGATAGGTTGTATGGCGCT 59.249 50.000 7.64 0.00 43.77 5.92
822 825 1.137513 GACGATAGGTTGTATGGCGC 58.862 55.000 0.00 0.00 43.77 6.53
835 838 9.389755 TGTCATCAATAAATGAAAAGGACGATA 57.610 29.630 0.00 0.00 42.54 2.92
921 932 7.670605 ACTACCTAGTAAGCCACATTTGATA 57.329 36.000 0.00 0.00 34.13 2.15
943 957 4.818546 GTGGCTGATGAATATGCAAGTACT 59.181 41.667 0.00 0.00 0.00 2.73
944 958 4.576053 TGTGGCTGATGAATATGCAAGTAC 59.424 41.667 0.00 0.00 0.00 2.73
945 959 4.779696 TGTGGCTGATGAATATGCAAGTA 58.220 39.130 0.00 0.00 0.00 2.24
1127 1166 2.579873 GTCCCGTGCCTATGTAGTAGA 58.420 52.381 0.00 0.00 31.71 2.59
1130 1169 2.012902 GCGTCCCGTGCCTATGTAGT 62.013 60.000 0.00 0.00 0.00 2.73
1403 1456 8.862325 AAAATCAAAGTACTGTATCATCCACA 57.138 30.769 0.00 0.00 0.00 4.17
1463 1521 7.273598 CGAACCTATATGTGCTACATGTATGAC 59.726 40.741 5.91 6.73 39.53 3.06
1503 1561 0.038166 TGGGCCTCAACCTGATGTTC 59.962 55.000 4.53 0.00 34.00 3.18
1515 1577 1.072331 TCTCTTCAACAAGTGGGCCTC 59.928 52.381 4.53 0.00 0.00 4.70
1580 1642 2.806019 GCAAACCACAAACCATGCATGA 60.806 45.455 28.31 0.00 34.10 3.07
1627 1689 0.106569 TTGCCGAATGCCCATGAGAT 60.107 50.000 0.00 0.00 40.16 2.75
1629 1691 0.101759 CTTTGCCGAATGCCCATGAG 59.898 55.000 0.00 0.00 40.16 2.90
1630 1692 0.323269 TCTTTGCCGAATGCCCATGA 60.323 50.000 0.00 0.00 40.16 3.07
1666 5268 1.063717 CCCTTGTGGCACCTTGGATAT 60.064 52.381 16.26 0.00 0.00 1.63
1753 5355 6.940714 ACTGTACAAAGTAAATCGTTCACAC 58.059 36.000 0.00 0.00 0.00 3.82
1793 5395 7.371159 TGGTAGCAAGAACATCTAGATATTCG 58.629 38.462 16.18 6.26 30.01 3.34
1814 5416 5.830991 ACTACCATTTTGCTTTCACTTGGTA 59.169 36.000 0.00 0.00 37.24 3.25
1817 5419 7.538303 AAAACTACCATTTTGCTTTCACTTG 57.462 32.000 0.00 0.00 30.56 3.16
1841 5443 5.591067 TCCGTTTTGCTCCTTCTCTTAAAAA 59.409 36.000 0.00 0.00 0.00 1.94
1842 5444 5.127491 TCCGTTTTGCTCCTTCTCTTAAAA 58.873 37.500 0.00 0.00 0.00 1.52
1843 5445 4.710324 TCCGTTTTGCTCCTTCTCTTAAA 58.290 39.130 0.00 0.00 0.00 1.52
1844 5446 4.345859 TCCGTTTTGCTCCTTCTCTTAA 57.654 40.909 0.00 0.00 0.00 1.85
1845 5447 4.202326 ACTTCCGTTTTGCTCCTTCTCTTA 60.202 41.667 0.00 0.00 0.00 2.10
1846 5448 2.930826 TCCGTTTTGCTCCTTCTCTT 57.069 45.000 0.00 0.00 0.00 2.85
1847 5449 2.104963 ACTTCCGTTTTGCTCCTTCTCT 59.895 45.455 0.00 0.00 0.00 3.10
1848 5450 2.495084 ACTTCCGTTTTGCTCCTTCTC 58.505 47.619 0.00 0.00 0.00 2.87
1849 5451 2.618709 CAACTTCCGTTTTGCTCCTTCT 59.381 45.455 0.00 0.00 0.00 2.85
1850 5452 2.287608 CCAACTTCCGTTTTGCTCCTTC 60.288 50.000 0.00 0.00 0.00 3.46
1851 5453 1.681264 CCAACTTCCGTTTTGCTCCTT 59.319 47.619 0.00 0.00 0.00 3.36
1852 5454 1.318576 CCAACTTCCGTTTTGCTCCT 58.681 50.000 0.00 0.00 0.00 3.69
1853 5455 1.001706 GACCAACTTCCGTTTTGCTCC 60.002 52.381 0.00 0.00 0.00 4.70
1854 5456 1.673920 TGACCAACTTCCGTTTTGCTC 59.326 47.619 0.00 0.00 0.00 4.26
1855 5457 1.757682 TGACCAACTTCCGTTTTGCT 58.242 45.000 0.00 0.00 0.00 3.91
1856 5458 2.793278 ATGACCAACTTCCGTTTTGC 57.207 45.000 0.00 0.00 0.00 3.68
1857 5459 4.677584 TCAAATGACCAACTTCCGTTTTG 58.322 39.130 0.00 0.00 0.00 2.44
1858 5460 4.993029 TCAAATGACCAACTTCCGTTTT 57.007 36.364 0.00 0.00 0.00 2.43
1859 5461 4.993029 TTCAAATGACCAACTTCCGTTT 57.007 36.364 0.00 0.00 0.00 3.60
1860 5462 4.202111 CCTTTCAAATGACCAACTTCCGTT 60.202 41.667 0.00 0.00 0.00 4.44
1861 5463 3.317993 CCTTTCAAATGACCAACTTCCGT 59.682 43.478 0.00 0.00 0.00 4.69
1864 5466 7.841915 TTTTTCCTTTCAAATGACCAACTTC 57.158 32.000 0.00 0.00 0.00 3.01
1879 5481 9.220767 GGCGATATCTAGTATCATTTTTCCTTT 57.779 33.333 0.34 0.00 39.36 3.11
1974 5577 6.585695 TCCTCTTGGTGTTTACTACTGTAG 57.414 41.667 13.13 13.13 34.23 2.74
1978 5581 5.131475 TGGTTTCCTCTTGGTGTTTACTACT 59.869 40.000 0.00 0.00 34.23 2.57
1979 5582 5.370679 TGGTTTCCTCTTGGTGTTTACTAC 58.629 41.667 0.00 0.00 34.23 2.73
1980 5583 5.633655 TGGTTTCCTCTTGGTGTTTACTA 57.366 39.130 0.00 0.00 34.23 1.82
1981 5584 4.513406 TGGTTTCCTCTTGGTGTTTACT 57.487 40.909 0.00 0.00 34.23 2.24
1982 5585 6.235664 TCTATGGTTTCCTCTTGGTGTTTAC 58.764 40.000 0.00 0.00 34.23 2.01
1984 5587 5.073144 TCTCTATGGTTTCCTCTTGGTGTTT 59.927 40.000 0.00 0.00 34.23 2.83
1985 5588 4.597507 TCTCTATGGTTTCCTCTTGGTGTT 59.402 41.667 0.00 0.00 34.23 3.32
1986 5589 4.168101 TCTCTATGGTTTCCTCTTGGTGT 58.832 43.478 0.00 0.00 34.23 4.16
1987 5590 4.826274 TCTCTATGGTTTCCTCTTGGTG 57.174 45.455 0.00 0.00 34.23 4.17
1988 5591 4.164988 CCATCTCTATGGTTTCCTCTTGGT 59.835 45.833 0.00 0.00 46.68 3.67
1989 5592 4.712476 CCATCTCTATGGTTTCCTCTTGG 58.288 47.826 0.00 0.00 46.68 3.61
2001 5604 2.636893 CAACCCCCTCTCCATCTCTATG 59.363 54.545 0.00 0.00 0.00 2.23
2003 5606 1.692762 GCAACCCCCTCTCCATCTCTA 60.693 57.143 0.00 0.00 0.00 2.43
2007 5610 2.190578 CGCAACCCCCTCTCCATC 59.809 66.667 0.00 0.00 0.00 3.51
2010 5613 4.785453 CTGCGCAACCCCCTCTCC 62.785 72.222 13.05 0.00 0.00 3.71
2023 5626 0.933097 CATAGGCTTGCTGTACTGCG 59.067 55.000 18.40 7.60 35.36 5.18
2047 5650 0.458716 GTCGCAGAGGAACTGGTAGC 60.459 60.000 0.00 0.00 45.82 3.58
2050 5653 2.651361 CGTCGCAGAGGAACTGGT 59.349 61.111 0.00 0.00 46.48 4.00
2053 5656 2.282958 TCCCGTCGCAGAGGAACT 60.283 61.111 0.00 0.00 46.48 3.01
2072 5675 1.797537 GATGTGGCGAAAACGCTGC 60.798 57.895 13.81 7.95 34.92 5.25
2077 5680 0.240945 CAGTGGGATGTGGCGAAAAC 59.759 55.000 0.00 0.00 0.00 2.43
2081 5684 3.315142 GAGCAGTGGGATGTGGCGA 62.315 63.158 0.00 0.00 0.00 5.54
2082 5685 2.821366 GAGCAGTGGGATGTGGCG 60.821 66.667 0.00 0.00 0.00 5.69
2084 5687 0.545171 AGATGAGCAGTGGGATGTGG 59.455 55.000 0.00 0.00 0.00 4.17
2093 5696 0.247460 TGCACGCTAAGATGAGCAGT 59.753 50.000 0.00 0.00 42.99 4.40
2108 5711 1.603678 CCTGGTGTCAAAAGCATGCAC 60.604 52.381 21.98 9.41 0.00 4.57
2111 5714 0.387622 CGCCTGGTGTCAAAAGCATG 60.388 55.000 0.00 0.00 0.00 4.06
2129 5732 2.202974 TAGCCTGCATGCTGCTCG 60.203 61.111 29.94 14.64 45.31 5.03
2130 5733 1.028330 TTGTAGCCTGCATGCTGCTC 61.028 55.000 29.94 22.56 45.31 4.26
2131 5734 1.001764 TTGTAGCCTGCATGCTGCT 60.002 52.632 29.28 29.28 45.31 4.24
2132 5735 1.138247 GTTGTAGCCTGCATGCTGC 59.862 57.895 24.66 23.19 42.77 5.25
2133 5736 1.805254 GGTTGTAGCCTGCATGCTG 59.195 57.895 24.66 18.55 42.77 4.41
2134 5737 1.746615 CGGTTGTAGCCTGCATGCT 60.747 57.895 20.54 20.54 45.38 3.79
2135 5738 2.764314 CCGGTTGTAGCCTGCATGC 61.764 63.158 11.82 11.82 0.00 4.06
2136 5739 2.764314 GCCGGTTGTAGCCTGCATG 61.764 63.158 1.90 0.00 38.41 4.06
2137 5740 2.438434 GCCGGTTGTAGCCTGCAT 60.438 61.111 1.90 0.00 38.41 3.96
2153 5756 3.264897 CAGTATCTGGGCGTGCGC 61.265 66.667 8.17 8.17 41.06 6.09
2162 5765 4.489810 GAGCGGTCATAATCCAGTATCTG 58.510 47.826 10.30 0.00 0.00 2.90
2163 5766 3.191581 CGAGCGGTCATAATCCAGTATCT 59.808 47.826 15.89 0.00 0.00 1.98
2164 5767 3.502920 CGAGCGGTCATAATCCAGTATC 58.497 50.000 15.89 0.00 0.00 2.24
2165 5768 2.231478 CCGAGCGGTCATAATCCAGTAT 59.769 50.000 15.89 0.00 0.00 2.12
2166 5769 1.611977 CCGAGCGGTCATAATCCAGTA 59.388 52.381 15.89 0.00 0.00 2.74
2167 5770 0.389391 CCGAGCGGTCATAATCCAGT 59.611 55.000 15.89 0.00 0.00 4.00
2168 5771 0.319900 CCCGAGCGGTCATAATCCAG 60.320 60.000 15.89 0.00 0.00 3.86
2169 5772 1.745890 CCCGAGCGGTCATAATCCA 59.254 57.895 15.89 0.00 0.00 3.41
2170 5773 1.668151 GCCCGAGCGGTCATAATCC 60.668 63.158 15.89 0.00 0.00 3.01
2171 5774 1.668151 GGCCCGAGCGGTCATAATC 60.668 63.158 15.89 0.00 41.24 1.75
2172 5775 2.426023 GGCCCGAGCGGTCATAAT 59.574 61.111 15.89 0.00 41.24 1.28
2173 5776 3.078196 TGGCCCGAGCGGTCATAA 61.078 61.111 15.89 0.00 43.09 1.90
2180 5783 4.241555 ATTAGCCTGGCCCGAGCG 62.242 66.667 16.57 0.00 41.24 5.03
2181 5784 2.281139 GATTAGCCTGGCCCGAGC 60.281 66.667 16.57 0.00 38.76 5.03
2182 5785 1.118356 AGAGATTAGCCTGGCCCGAG 61.118 60.000 16.57 0.00 0.00 4.63
2183 5786 0.691078 AAGAGATTAGCCTGGCCCGA 60.691 55.000 16.57 1.39 0.00 5.14
2184 5787 0.533755 CAAGAGATTAGCCTGGCCCG 60.534 60.000 16.57 0.00 0.00 6.13
2185 5788 0.821301 GCAAGAGATTAGCCTGGCCC 60.821 60.000 16.57 2.34 0.00 5.80
2186 5789 0.821301 GGCAAGAGATTAGCCTGGCC 60.821 60.000 16.57 0.00 44.92 5.36
2187 5790 2.712984 GGCAAGAGATTAGCCTGGC 58.287 57.895 11.65 11.65 44.92 4.85
2192 5795 1.936547 CCGTTCAGGCAAGAGATTAGC 59.063 52.381 0.00 0.00 0.00 3.09
2193 5796 3.190874 GTCCGTTCAGGCAAGAGATTAG 58.809 50.000 0.00 0.00 40.77 1.73
2194 5797 2.565391 TGTCCGTTCAGGCAAGAGATTA 59.435 45.455 0.00 0.00 40.77 1.75
2195 5798 1.347707 TGTCCGTTCAGGCAAGAGATT 59.652 47.619 0.00 0.00 40.77 2.40
2196 5799 0.976641 TGTCCGTTCAGGCAAGAGAT 59.023 50.000 0.00 0.00 40.77 2.75
2197 5800 0.033504 GTGTCCGTTCAGGCAAGAGA 59.966 55.000 0.00 0.00 40.77 3.10
2198 5801 0.951040 GGTGTCCGTTCAGGCAAGAG 60.951 60.000 0.00 0.00 40.77 2.85
2199 5802 1.070786 GGTGTCCGTTCAGGCAAGA 59.929 57.895 0.00 0.00 40.77 3.02
2200 5803 1.966451 GGGTGTCCGTTCAGGCAAG 60.966 63.158 0.00 0.00 40.77 4.01
2201 5804 2.112297 GGGTGTCCGTTCAGGCAA 59.888 61.111 0.00 0.00 40.77 4.52
2211 5814 3.365265 CTTGCTTGCCGGGTGTCC 61.365 66.667 2.18 0.00 0.00 4.02
2212 5815 4.043200 GCTTGCTTGCCGGGTGTC 62.043 66.667 2.18 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.