Multiple sequence alignment - TraesCS5A01G416300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G416300 chr5A 100.000 6574 0 0 436 7009 605146089 605152662 0.000000e+00 12140
1 TraesCS5A01G416300 chr5A 100.000 211 0 0 1 211 605145654 605145864 2.370000e-104 390
2 TraesCS5A01G416300 chr5A 84.983 293 30 5 4764 5042 605149772 605150064 1.150000e-72 285
3 TraesCS5A01G416300 chr5A 84.983 293 30 5 4119 4411 605150417 605150695 1.150000e-72 285
4 TraesCS5A01G416300 chr5B 92.710 4403 216 51 449 4822 594866486 594870812 0.000000e+00 6255
5 TraesCS5A01G416300 chr5B 93.617 705 39 4 4825 5528 594870918 594871617 0.000000e+00 1048
6 TraesCS5A01G416300 chr5B 86.593 813 66 24 5652 6432 594871828 594872629 0.000000e+00 857
7 TraesCS5A01G416300 chr5B 91.829 257 20 1 4506 4761 324708125 324708381 2.400000e-94 357
8 TraesCS5A01G416300 chr5B 90.182 275 22 5 4506 4779 317855822 317855552 3.110000e-93 353
9 TraesCS5A01G416300 chr5B 86.408 309 21 11 6712 7008 594872791 594873090 1.130000e-82 318
10 TraesCS5A01G416300 chr5B 87.952 249 26 3 4797 5042 594870152 594870399 2.470000e-74 291
11 TraesCS5A01G416300 chr5B 86.026 229 22 2 4183 4411 594870918 594871136 3.270000e-58 237
12 TraesCS5A01G416300 chr5D 91.070 2889 164 39 491 3305 483689984 483692852 0.000000e+00 3819
13 TraesCS5A01G416300 chr5D 92.796 2318 103 21 3304 5617 483693018 483695275 0.000000e+00 3297
14 TraesCS5A01G416300 chr5D 87.592 814 50 31 5652 6432 483695438 483696233 0.000000e+00 896
15 TraesCS5A01G416300 chr5D 89.632 299 17 6 6712 7008 483696389 483696675 1.110000e-97 368
16 TraesCS5A01G416300 chr5D 89.007 282 27 4 4765 5042 483693822 483694103 5.200000e-91 346
17 TraesCS5A01G416300 chr5D 85.666 293 29 4 4119 4411 483694425 483694704 5.320000e-76 296
18 TraesCS5A01G416300 chr5D 89.888 178 16 2 35 211 483689094 483689270 1.970000e-55 228
19 TraesCS5A01G416300 chr4D 93.916 263 12 4 4505 4765 208560431 208560171 1.830000e-105 394
20 TraesCS5A01G416300 chr7B 94.071 253 14 1 4507 4758 107925594 107925846 3.970000e-102 383
21 TraesCS5A01G416300 chr7B 88.672 256 24 3 4508 4761 595434850 595435102 2.460000e-79 307
22 TraesCS5A01G416300 chr7D 93.676 253 15 1 4507 4758 145766699 145766951 1.850000e-100 377
23 TraesCS5A01G416300 chr6D 91.513 271 20 3 4508 4776 103962230 103962499 3.090000e-98 370


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G416300 chr5A 605145654 605152662 7008 False 3275.000000 12140 92.491500 1 7009 4 chr5A.!!$F1 7008
1 TraesCS5A01G416300 chr5B 594866486 594873090 6604 False 1501.000000 6255 88.884333 449 7008 6 chr5B.!!$F2 6559
2 TraesCS5A01G416300 chr5D 483689094 483696675 7581 False 1321.428571 3819 89.378714 35 7008 7 chr5D.!!$F1 6973

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
768 1212 0.373716 CGTAAAAGGAGCGGCACATC 59.626 55.000 1.45 0.00 0.00 3.06 F
2037 2520 0.468029 CCCAGGAGGTTTGTGCTGTT 60.468 55.000 0.00 0.00 34.21 3.16 F
2872 3383 0.829333 CACATAGCCTGGCAGTCTCT 59.171 55.000 22.65 9.76 0.00 3.10 F
2922 3433 1.000274 GTTCGGTTTCAAATGGCTGCT 60.000 47.619 0.00 0.00 0.00 4.24 F
4511 5202 1.405821 CTAACACTGAGACCTAGGGCG 59.594 57.143 14.81 0.00 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2062 2548 0.040204 ATCAAGGGGGCAGGAGTTTG 59.960 55.0 0.00 0.00 0.0 2.93 R
2905 3416 0.388907 CCAGCAGCCATTTGAAACCG 60.389 55.0 0.00 0.00 0.0 4.44 R
4511 5202 0.749649 TGTGGATGGCAACCAAACAC 59.250 50.0 18.82 6.62 41.4 3.32 R
4905 5701 0.035881 TGAAGTCTGGGAGCTGCAAG 59.964 55.0 7.79 5.15 0.0 4.01 R
6501 7494 0.104120 GACGCTTGGCCAAAACCTTT 59.896 50.0 20.91 0.28 0.0 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.315680 CGATAATTCGTTACTAGCACTTAGTAG 57.684 37.037 0.00 0.00 39.73 2.57
31 32 9.116054 GATAATTCGTTACTAGCACTTAGTAGC 57.884 37.037 0.00 0.00 43.78 3.58
32 33 6.696441 ATTCGTTACTAGCACTTAGTAGCT 57.304 37.500 12.33 12.33 43.78 3.32
33 34 5.481200 TCGTTACTAGCACTTAGTAGCTG 57.519 43.478 15.76 10.12 43.78 4.24
48 49 7.333672 ACTTAGTAGCTGTAATTAGCCAAACAC 59.666 37.037 0.00 0.00 44.76 3.32
97 98 2.859165 TCCTCGTTGAGAGCCATTTT 57.141 45.000 0.00 0.00 45.54 1.82
100 101 2.095059 CCTCGTTGAGAGCCATTTTTGG 60.095 50.000 0.00 0.00 45.54 3.28
148 149 2.698803 ACTCGTTGTGCTATGCATTCA 58.301 42.857 3.54 0.14 41.91 2.57
156 157 0.890542 GCTATGCATTCATGGGCCGA 60.891 55.000 3.54 0.00 34.22 5.54
157 158 0.877071 CTATGCATTCATGGGCCGAC 59.123 55.000 3.54 0.00 34.22 4.79
205 206 2.744709 TTCCGTGGCGCTAAAGGC 60.745 61.111 7.64 0.00 37.64 4.35
461 492 7.027161 CACAACTATGTTCTTATTTTTCGGGG 58.973 38.462 0.00 0.00 37.82 5.73
487 518 0.725117 GATGGCCGAAACCTGTAACG 59.275 55.000 0.00 0.00 0.00 3.18
504 939 5.051816 TGTAACGTGGGACTTAGTTTCAAG 58.948 41.667 0.00 0.00 0.00 3.02
514 949 6.149640 GGGACTTAGTTTCAAGAATCTCAACC 59.850 42.308 0.00 0.00 0.00 3.77
572 1007 4.419522 ACGCATGGTTCAACAGATAAAC 57.580 40.909 0.00 0.00 0.00 2.01
573 1008 3.818210 ACGCATGGTTCAACAGATAAACA 59.182 39.130 0.00 0.00 0.00 2.83
574 1009 4.158384 CGCATGGTTCAACAGATAAACAC 58.842 43.478 0.00 0.00 0.00 3.32
575 1010 4.320129 CGCATGGTTCAACAGATAAACACA 60.320 41.667 0.00 0.00 0.00 3.72
577 1012 5.801947 GCATGGTTCAACAGATAAACACATC 59.198 40.000 0.00 0.00 0.00 3.06
579 1014 4.764823 TGGTTCAACAGATAAACACATCCC 59.235 41.667 0.00 0.00 0.00 3.85
597 1032 9.927668 ACACATCCCAAATAAACAAATCTAAAG 57.072 29.630 0.00 0.00 0.00 1.85
691 1133 1.093159 CATTCACAAGAGGCAGCTCC 58.907 55.000 0.00 0.00 0.00 4.70
704 1146 2.159170 GGCAGCTCCTAACTAGTGTCAG 60.159 54.545 0.00 0.00 0.00 3.51
712 1154 3.127203 CCTAACTAGTGTCAGTCAGTCGG 59.873 52.174 0.00 0.00 0.00 4.79
768 1212 0.373716 CGTAAAAGGAGCGGCACATC 59.626 55.000 1.45 0.00 0.00 3.06
778 1222 2.456119 CGGCACATCGGAGCTCAAC 61.456 63.158 17.19 0.00 0.00 3.18
779 1223 2.109126 GGCACATCGGAGCTCAACC 61.109 63.158 17.19 0.00 0.00 3.77
785 1229 3.691342 CGGAGCTCAACCGGGTGA 61.691 66.667 23.52 23.52 45.65 4.02
829 1282 2.712539 CCAAAACGCACGACAGCA 59.287 55.556 0.00 0.00 0.00 4.41
838 1291 2.742372 ACGACAGCACCCGCATTC 60.742 61.111 0.00 0.00 42.27 2.67
969 1445 1.075536 ACAAAGGTCCCAATCCTCACC 59.924 52.381 0.00 0.00 33.76 4.02
987 1464 4.489771 CGACCCATCCAGCACCCC 62.490 72.222 0.00 0.00 0.00 4.95
988 1465 3.338250 GACCCATCCAGCACCCCA 61.338 66.667 0.00 0.00 0.00 4.96
989 1466 2.618185 ACCCATCCAGCACCCCAT 60.618 61.111 0.00 0.00 0.00 4.00
991 1468 2.196776 CCATCCAGCACCCCATCC 59.803 66.667 0.00 0.00 0.00 3.51
1060 1537 2.684943 CAACCCCCAAACCCTAAAACT 58.315 47.619 0.00 0.00 0.00 2.66
1152 1635 2.931536 CGACGACGTGATCTTCCTG 58.068 57.895 4.58 0.00 34.56 3.86
1489 1972 3.119709 GACTCGCTCTCCAGGCTCG 62.120 68.421 0.00 0.00 0.00 5.03
1671 2154 2.599677 GAGGAGGGTGAGGTAATCGAT 58.400 52.381 0.00 0.00 0.00 3.59
1734 2217 3.796764 GCTAGGCAAGCCATCTCTT 57.203 52.632 14.40 0.00 46.25 2.85
1737 2220 0.548031 TAGGCAAGCCATCTCTTGGG 59.452 55.000 14.40 0.00 46.55 4.12
1839 2322 2.041701 GGGGCCAATGCTATTGTCATT 58.958 47.619 4.39 0.00 37.74 2.57
1944 2427 1.344114 GGCAATGTGGTGACAATTGGT 59.656 47.619 10.83 0.00 46.06 3.67
2037 2520 0.468029 CCCAGGAGGTTTGTGCTGTT 60.468 55.000 0.00 0.00 34.21 3.16
2062 2548 6.550108 TGGTAGAGGACAGGTATATTTCTCAC 59.450 42.308 0.00 0.00 0.00 3.51
2073 2559 5.297029 GGTATATTTCTCACAAACTCCTGCC 59.703 44.000 0.00 0.00 0.00 4.85
2086 2572 1.566231 CTCCTGCCCCCTTGATAGTTT 59.434 52.381 0.00 0.00 0.00 2.66
2087 2573 2.777692 CTCCTGCCCCCTTGATAGTTTA 59.222 50.000 0.00 0.00 0.00 2.01
2115 2601 6.804534 TTGTTTTCATGCTTGTTAACTTCG 57.195 33.333 7.22 0.00 0.00 3.79
2122 2608 6.326375 TCATGCTTGTTAACTTCGTTTTGTT 58.674 32.000 7.22 0.00 0.00 2.83
2169 2655 3.831911 GCCTATCAGCTTAGATCCTCTGT 59.168 47.826 0.00 0.00 0.00 3.41
2312 2800 6.996879 ACATCAAAGTCTCTCCCATATTCATG 59.003 38.462 0.00 0.00 0.00 3.07
2319 2807 3.213506 TCTCCCATATTCATGCCAAACG 58.786 45.455 0.00 0.00 0.00 3.60
2328 2816 7.040755 CCATATTCATGCCAAACGTCCTATTTA 60.041 37.037 0.00 0.00 0.00 1.40
2332 2820 6.822442 TCATGCCAAACGTCCTATTTAGATA 58.178 36.000 0.00 0.00 0.00 1.98
2375 2863 7.900782 TCAAGTAATTAGTAAGTGGCTGAAC 57.099 36.000 0.00 0.00 0.00 3.18
2385 2873 3.914426 AGTGGCTGAACCTTATAGTGG 57.086 47.619 0.00 0.00 40.22 4.00
2422 2910 1.178534 ATGAAAGTGGCCACCCAACG 61.179 55.000 32.29 0.00 44.33 4.10
2424 2912 1.792118 GAAAGTGGCCACCCAACGAC 61.792 60.000 32.29 12.84 44.33 4.34
2430 2921 1.652563 GCCACCCAACGACTGAAAC 59.347 57.895 0.00 0.00 0.00 2.78
2439 2930 6.966632 CACCCAACGACTGAAACATATAAATG 59.033 38.462 0.00 0.00 39.17 2.32
2494 2987 7.406031 TCTACCACTAATCGACTTTCTGAAT 57.594 36.000 0.00 0.00 0.00 2.57
2497 2990 6.464222 ACCACTAATCGACTTTCTGAATTCA 58.536 36.000 8.12 8.12 0.00 2.57
2498 2991 6.369065 ACCACTAATCGACTTTCTGAATTCAC 59.631 38.462 3.38 0.00 0.00 3.18
2528 3021 3.343972 GCAAGCGCTGTCAGGAAA 58.656 55.556 12.58 0.00 34.30 3.13
2529 3022 1.654220 GCAAGCGCTGTCAGGAAAA 59.346 52.632 12.58 0.00 34.30 2.29
2553 3046 2.223340 GCCTCGTGTCCATTTGCATTAG 60.223 50.000 0.00 0.00 0.00 1.73
2567 3060 1.394917 GCATTAGCACAGGAACGAGTG 59.605 52.381 0.00 0.00 41.58 3.51
2628 3138 9.791820 CTTCATGCTTAATATGTCACATTTTGA 57.208 29.630 0.00 0.00 0.00 2.69
2634 3144 7.489113 GCTTAATATGTCACATTTTGAGGGTTG 59.511 37.037 12.61 0.00 33.71 3.77
2637 3147 3.636679 TGTCACATTTTGAGGGTTGGAA 58.363 40.909 0.00 0.00 33.71 3.53
2640 3150 5.130145 TGTCACATTTTGAGGGTTGGAATTT 59.870 36.000 0.00 0.00 33.71 1.82
2807 3318 7.818930 TGCTTTGTTTTCTTCTTTTGTTCAGAT 59.181 29.630 0.00 0.00 0.00 2.90
2872 3383 0.829333 CACATAGCCTGGCAGTCTCT 59.171 55.000 22.65 9.76 0.00 3.10
2922 3433 1.000274 GTTCGGTTTCAAATGGCTGCT 60.000 47.619 0.00 0.00 0.00 4.24
2945 3456 5.707931 TGGTGCATGTTAACACATTGTATG 58.292 37.500 11.22 4.59 41.16 2.39
3174 3685 3.393278 TGGGGCCTATGAATACAAGGTAC 59.607 47.826 0.84 0.00 32.67 3.34
3305 3827 9.056005 ACTACAACCATGTACATGCAAATATAG 57.944 33.333 27.27 21.93 41.05 1.31
3362 4051 2.691409 TGGCCACATAGTAGTTCAGC 57.309 50.000 0.00 0.00 0.00 4.26
3456 4146 9.585099 TTGATCAAAGTATTCAAATGTATTGGC 57.415 29.630 5.45 0.00 0.00 4.52
3471 4161 4.698304 TGTATTGGCCAGTTTAAGTGTAGC 59.302 41.667 5.89 0.00 0.00 3.58
4008 4699 6.094048 CCCATGTTTCTTAGGTACAACTCATG 59.906 42.308 0.00 0.00 0.00 3.07
4009 4700 6.655003 CCATGTTTCTTAGGTACAACTCATGT 59.345 38.462 0.00 0.00 46.36 3.21
4236 4927 9.613428 CTATAGATTGTTGTCCTTAATGGTCAA 57.387 33.333 0.00 0.00 40.56 3.18
4254 4945 9.857656 AATGGTCAATAACTCAATGATCTACAT 57.142 29.630 0.00 0.00 41.45 2.29
4255 4946 8.667076 TGGTCAATAACTCAATGATCTACATG 57.333 34.615 0.00 0.00 39.39 3.21
4256 4947 8.485392 TGGTCAATAACTCAATGATCTACATGA 58.515 33.333 0.00 0.00 39.39 3.07
4257 4948 9.330063 GGTCAATAACTCAATGATCTACATGAA 57.670 33.333 0.00 0.00 39.39 2.57
4370 5061 4.750098 GTCGAATGGATAACTGTGGTATGG 59.250 45.833 0.00 0.00 0.00 2.74
4373 5064 4.982241 ATGGATAACTGTGGTATGGGAG 57.018 45.455 0.00 0.00 0.00 4.30
4437 5128 6.186957 TGACATATATTCACAGGCCAAAAGT 58.813 36.000 5.01 0.00 0.00 2.66
4511 5202 1.405821 CTAACACTGAGACCTAGGGCG 59.594 57.143 14.81 0.00 0.00 6.13
4632 5323 5.243730 ACTTTTTCAGTCACATACCCCATTG 59.756 40.000 0.00 0.00 0.00 2.82
4633 5324 4.380843 TTTCAGTCACATACCCCATTGT 57.619 40.909 0.00 0.00 0.00 2.71
4634 5325 3.627395 TCAGTCACATACCCCATTGTC 57.373 47.619 0.00 0.00 0.00 3.18
4635 5326 2.909662 TCAGTCACATACCCCATTGTCA 59.090 45.455 0.00 0.00 0.00 3.58
4636 5327 3.523157 TCAGTCACATACCCCATTGTCAT 59.477 43.478 0.00 0.00 0.00 3.06
4684 5377 2.292016 CACAAGTGTGGCGACCAATTTA 59.708 45.455 3.39 0.00 42.10 1.40
4739 5432 4.513692 GTGACACACAAGTATGGCAAAGTA 59.486 41.667 0.00 0.00 35.02 2.24
4752 5445 2.102578 GCAAAGTATGGATGGCAACCT 58.897 47.619 15.31 3.44 0.00 3.50
4766 5459 1.943340 GCAACCTAACATGCCTCTAGC 59.057 52.381 0.00 0.00 44.14 3.42
4778 5471 1.749634 GCCTCTAGCGTCTCTTGGTTA 59.250 52.381 0.00 0.00 0.00 2.85
4788 5481 3.615592 CGTCTCTTGGTTATGTTTCGGGA 60.616 47.826 0.00 0.00 0.00 5.14
4822 5515 5.354234 CACTGTGCCTTCTTTATCCGTAATT 59.646 40.000 0.00 0.00 0.00 1.40
4905 5701 2.935201 CAGTGATCTGCCTGAAAGCTAC 59.065 50.000 0.00 0.00 34.79 3.58
4912 5709 0.169894 GCCTGAAAGCTACTTGCAGC 59.830 55.000 9.46 2.76 43.76 5.25
4940 5737 9.357652 CCCAGACTTCATATTTGTTTAATTGTG 57.642 33.333 0.00 0.00 0.00 3.33
5058 5855 2.912956 TCTTTCCTTAGGATGTGTGCCT 59.087 45.455 0.12 0.00 39.56 4.75
5059 5856 3.330701 TCTTTCCTTAGGATGTGTGCCTT 59.669 43.478 0.12 0.00 36.96 4.35
5060 5857 3.806949 TTCCTTAGGATGTGTGCCTTT 57.193 42.857 0.12 0.00 36.96 3.11
5061 5858 3.806949 TCCTTAGGATGTGTGCCTTTT 57.193 42.857 0.00 0.00 36.96 2.27
5122 5920 3.370104 TCCAAAGCACTCCTTCCAAAAA 58.630 40.909 0.00 0.00 31.99 1.94
5172 5970 3.442625 TCTGTTCCGTGTACAGACTATGG 59.557 47.826 0.00 0.00 45.15 2.74
5195 5993 6.128117 TGGAACTTTACTTTGTCATTATCGGC 60.128 38.462 0.00 0.00 0.00 5.54
5249 6047 7.713073 GGGATTCTGGATCACTAAGTCTTAAAG 59.287 40.741 0.00 0.00 35.18 1.85
5318 6116 4.039488 TGATTTGCAATGGAAGCTCAAACT 59.961 37.500 0.00 0.00 30.69 2.66
5367 6165 6.589830 TCACTCTTTTTCTTTCTTCAGACG 57.410 37.500 0.00 0.00 0.00 4.18
5372 6170 6.288294 TCTTTTTCTTTCTTCAGACGATGGA 58.712 36.000 0.00 0.00 0.00 3.41
5384 6182 5.674525 TCAGACGATGGAGCATTTAATCTT 58.325 37.500 0.00 0.00 0.00 2.40
5399 6197 9.766277 GCATTTAATCTTGTTTGTTGACAAAAA 57.234 25.926 10.58 3.24 46.08 1.94
5423 6221 7.992754 ATAGTCCCAAATCAGATCTTATTGC 57.007 36.000 2.91 0.00 0.00 3.56
5524 6322 4.391830 CACGCACCACAGTTTATGTAGAAT 59.608 41.667 0.00 0.00 41.41 2.40
5526 6324 5.106712 ACGCACCACAGTTTATGTAGAATTG 60.107 40.000 0.00 0.00 41.41 2.32
5527 6325 5.106712 CGCACCACAGTTTATGTAGAATTGT 60.107 40.000 0.00 0.00 41.41 2.71
5528 6326 6.086222 GCACCACAGTTTATGTAGAATTGTG 58.914 40.000 5.76 5.76 41.41 3.33
5532 6331 7.433708 CACAGTTTATGTAGAATTGTGGTCA 57.566 36.000 5.04 0.00 41.41 4.02
5570 6369 3.244665 TGAATGAGAAGTGTCATGCCTGT 60.245 43.478 0.00 0.00 37.24 4.00
5617 6416 5.574188 AGAAGTGCATAGAAAATTCCCTGT 58.426 37.500 0.00 0.00 0.00 4.00
5618 6417 6.012745 AGAAGTGCATAGAAAATTCCCTGTT 58.987 36.000 0.00 0.00 0.00 3.16
5619 6418 5.904362 AGTGCATAGAAAATTCCCTGTTC 57.096 39.130 0.00 0.00 0.00 3.18
5623 6422 5.127519 TGCATAGAAAATTCCCTGTTCATGG 59.872 40.000 0.00 0.00 0.00 3.66
5624 6423 5.360714 GCATAGAAAATTCCCTGTTCATGGA 59.639 40.000 0.00 0.00 0.00 3.41
5642 6470 7.412853 TCATGGATGATGTTTGTCATTTCAT 57.587 32.000 0.00 0.00 38.88 2.57
5645 6575 6.623486 TGGATGATGTTTGTCATTTCATGTC 58.377 36.000 0.00 0.00 38.88 3.06
5649 6579 6.448852 TGATGTTTGTCATTTCATGTCTTGG 58.551 36.000 0.00 0.00 36.83 3.61
5650 6580 5.850557 TGTTTGTCATTTCATGTCTTGGT 57.149 34.783 0.00 0.00 0.00 3.67
5683 6613 6.242508 GACATTCAGTCTTGGTAACCTTTC 57.757 41.667 0.00 0.00 44.09 2.62
5684 6614 5.070685 ACATTCAGTCTTGGTAACCTTTCC 58.929 41.667 0.00 0.00 0.00 3.13
5757 6692 3.253921 TGGTGTCGTACGAGAAGAAATCA 59.746 43.478 20.18 7.55 0.00 2.57
5765 6700 5.399892 CGTACGAGAAGAAATCATTCTAGCC 59.600 44.000 10.44 0.00 45.19 3.93
5785 6720 1.539065 CCCCATCTTTGATCGAGGACG 60.539 57.143 0.00 0.00 41.26 4.79
5789 6724 1.218047 CTTTGATCGAGGACGGGCA 59.782 57.895 0.00 0.00 40.21 5.36
5793 6728 0.467474 TGATCGAGGACGGGCATACT 60.467 55.000 0.00 0.00 40.21 2.12
5804 6739 0.811616 GGGCATACTGGTTCTCTGCG 60.812 60.000 0.00 0.00 33.69 5.18
5805 6740 0.108138 GGCATACTGGTTCTCTGCGT 60.108 55.000 0.00 0.00 33.69 5.24
5865 6800 4.173924 GAGAGCAGCCTCCCAGCC 62.174 72.222 0.00 0.00 38.96 4.85
5874 6809 4.087892 CTCCCAGCCCGTCTGTGG 62.088 72.222 1.99 3.28 41.25 4.17
5909 6847 3.245158 CCCCTATCGATCTACCACTACCA 60.245 52.174 0.00 0.00 0.00 3.25
5975 6914 5.666969 TTGAAAACACTGGACATCGTAAG 57.333 39.130 0.00 0.00 0.00 2.34
5997 6936 7.889589 AAGAAATGGCTGTAACAATAAAAGC 57.110 32.000 0.00 0.00 0.00 3.51
6020 6960 3.073144 TGTTTCCGTTTGCTACTTTGC 57.927 42.857 0.00 0.00 0.00 3.68
6035 6975 2.725203 TTTGCGAGTGGAAGACCCGG 62.725 60.000 0.00 0.00 37.93 5.73
6103 7050 1.519455 GCCACTTCGGAGGATCACG 60.519 63.158 0.00 0.00 36.25 4.35
6109 7056 3.314357 CACTTCGGAGGATCACGTACATA 59.686 47.826 0.00 0.00 36.25 2.29
6110 7059 3.564644 ACTTCGGAGGATCACGTACATAG 59.435 47.826 0.00 0.00 36.25 2.23
6214 7178 1.000274 GGGTGTGCTGTTGATTTGTCC 60.000 52.381 0.00 0.00 0.00 4.02
6256 7220 0.882927 GCTACGTGCTTTGACACCCA 60.883 55.000 0.00 0.00 37.25 4.51
6258 7222 2.151202 CTACGTGCTTTGACACCCAAT 58.849 47.619 0.00 0.00 37.25 3.16
6259 7223 2.264005 ACGTGCTTTGACACCCAATA 57.736 45.000 0.00 0.00 37.25 1.90
6260 7224 1.877443 ACGTGCTTTGACACCCAATAC 59.123 47.619 0.00 0.00 37.25 1.89
6261 7225 2.151202 CGTGCTTTGACACCCAATACT 58.849 47.619 0.00 0.00 37.25 2.12
6262 7226 2.095768 CGTGCTTTGACACCCAATACTG 60.096 50.000 0.00 0.00 37.25 2.74
6264 7228 1.135689 GCTTTGACACCCAATACTGCG 60.136 52.381 0.00 0.00 34.23 5.18
6265 7229 1.468520 CTTTGACACCCAATACTGCGG 59.531 52.381 0.00 0.00 34.23 5.69
6288 7259 1.153489 AGACTGCGGCTGCTACATG 60.153 57.895 20.27 6.31 43.34 3.21
6353 7341 1.148310 ATCGCCTCCATAAAATCGCG 58.852 50.000 0.00 0.00 40.88 5.87
6366 7354 0.037697 AATCGCGGCCGCTATCATTA 60.038 50.000 43.60 21.83 39.32 1.90
6367 7355 0.175760 ATCGCGGCCGCTATCATTAT 59.824 50.000 43.60 22.94 39.32 1.28
6369 7357 0.735978 CGCGGCCGCTATCATTATCA 60.736 55.000 43.60 0.00 39.32 2.15
6370 7358 1.656652 GCGGCCGCTATCATTATCAT 58.343 50.000 41.71 0.00 38.26 2.45
6439 7432 4.391155 AGGTACTACGATCAGCTTAGAGG 58.609 47.826 0.00 0.00 36.02 3.69
6440 7433 3.502979 GGTACTACGATCAGCTTAGAGGG 59.497 52.174 0.00 0.00 0.00 4.30
6441 7434 2.588620 ACTACGATCAGCTTAGAGGGG 58.411 52.381 0.00 0.00 0.00 4.79
6442 7435 1.271102 CTACGATCAGCTTAGAGGGGC 59.729 57.143 0.00 0.00 0.00 5.80
6445 7438 1.539929 CGATCAGCTTAGAGGGGCTTG 60.540 57.143 0.00 0.00 36.59 4.01
6447 7440 1.656587 TCAGCTTAGAGGGGCTTGAA 58.343 50.000 0.00 0.00 36.59 2.69
6448 7441 1.279271 TCAGCTTAGAGGGGCTTGAAC 59.721 52.381 0.00 0.00 36.59 3.18
6451 7444 1.271926 GCTTAGAGGGGCTTGAACCAA 60.272 52.381 0.00 0.00 0.00 3.67
6453 7446 2.579410 TAGAGGGGCTTGAACCAAAC 57.421 50.000 0.00 0.00 0.00 2.93
6454 7447 0.537371 AGAGGGGCTTGAACCAAACG 60.537 55.000 0.00 0.00 0.00 3.60
6455 7448 0.822121 GAGGGGCTTGAACCAAACGT 60.822 55.000 0.00 0.00 0.00 3.99
6457 7450 0.822121 GGGGCTTGAACCAAACGTCT 60.822 55.000 0.00 0.00 0.00 4.18
6458 7451 1.543871 GGGGCTTGAACCAAACGTCTA 60.544 52.381 0.00 0.00 0.00 2.59
6461 7454 2.479275 GGCTTGAACCAAACGTCTACTC 59.521 50.000 0.00 0.00 0.00 2.59
6462 7455 3.128349 GCTTGAACCAAACGTCTACTCA 58.872 45.455 0.00 0.00 0.00 3.41
6465 7458 2.101750 TGAACCAAACGTCTACTCAGCA 59.898 45.455 0.00 0.00 0.00 4.41
6466 7459 2.902705 ACCAAACGTCTACTCAGCAA 57.097 45.000 0.00 0.00 0.00 3.91
6467 7460 3.188159 ACCAAACGTCTACTCAGCAAA 57.812 42.857 0.00 0.00 0.00 3.68
6468 7461 3.537580 ACCAAACGTCTACTCAGCAAAA 58.462 40.909 0.00 0.00 0.00 2.44
6471 7464 5.147162 CCAAACGTCTACTCAGCAAAATTC 58.853 41.667 0.00 0.00 0.00 2.17
6472 7465 5.147162 CAAACGTCTACTCAGCAAAATTCC 58.853 41.667 0.00 0.00 0.00 3.01
6473 7466 4.002906 ACGTCTACTCAGCAAAATTCCA 57.997 40.909 0.00 0.00 0.00 3.53
6474 7467 3.997021 ACGTCTACTCAGCAAAATTCCAG 59.003 43.478 0.00 0.00 0.00 3.86
6475 7468 3.997021 CGTCTACTCAGCAAAATTCCAGT 59.003 43.478 0.00 0.00 0.00 4.00
6476 7469 4.143030 CGTCTACTCAGCAAAATTCCAGTG 60.143 45.833 0.00 0.00 0.00 3.66
6477 7470 4.997395 GTCTACTCAGCAAAATTCCAGTGA 59.003 41.667 0.00 0.00 0.00 3.41
6481 7474 4.828939 ACTCAGCAAAATTCCAGTGATTGA 59.171 37.500 0.00 0.00 0.00 2.57
6482 7475 5.479375 ACTCAGCAAAATTCCAGTGATTGAT 59.521 36.000 0.00 0.00 0.00 2.57
6483 7476 6.014840 ACTCAGCAAAATTCCAGTGATTGATT 60.015 34.615 0.00 0.00 0.00 2.57
6484 7477 6.392354 TCAGCAAAATTCCAGTGATTGATTC 58.608 36.000 0.00 0.00 0.00 2.52
6485 7478 6.015265 TCAGCAAAATTCCAGTGATTGATTCA 60.015 34.615 0.00 0.00 0.00 2.57
6486 7479 6.310467 CAGCAAAATTCCAGTGATTGATTCAG 59.690 38.462 0.00 0.00 34.17 3.02
6487 7480 6.209986 AGCAAAATTCCAGTGATTGATTCAGA 59.790 34.615 0.00 0.00 34.17 3.27
6488 7481 6.869913 GCAAAATTCCAGTGATTGATTCAGAA 59.130 34.615 0.00 0.00 34.17 3.02
6489 7482 7.385752 GCAAAATTCCAGTGATTGATTCAGAAA 59.614 33.333 0.00 0.00 34.17 2.52
6490 7483 9.263538 CAAAATTCCAGTGATTGATTCAGAAAA 57.736 29.630 0.00 0.00 34.17 2.29
6492 7485 8.413309 AATTCCAGTGATTGATTCAGAAAAGA 57.587 30.769 0.00 0.00 34.17 2.52
6494 7487 7.822161 TCCAGTGATTGATTCAGAAAAGAAA 57.178 32.000 0.00 0.00 34.17 2.52
6495 7488 7.879070 TCCAGTGATTGATTCAGAAAAGAAAG 58.121 34.615 0.00 0.00 34.17 2.62
6496 7489 6.585322 CCAGTGATTGATTCAGAAAAGAAAGC 59.415 38.462 0.00 0.00 34.17 3.51
6497 7490 7.143340 CAGTGATTGATTCAGAAAAGAAAGCA 58.857 34.615 0.00 0.00 34.17 3.91
6498 7491 7.813148 CAGTGATTGATTCAGAAAAGAAAGCAT 59.187 33.333 0.00 0.00 34.17 3.79
6499 7492 8.365647 AGTGATTGATTCAGAAAAGAAAGCATT 58.634 29.630 0.00 0.00 34.17 3.56
6505 7498 9.480053 TGATTCAGAAAAGAAAGCATTAAAAGG 57.520 29.630 0.00 0.00 0.00 3.11
6506 7499 9.481340 GATTCAGAAAAGAAAGCATTAAAAGGT 57.519 29.630 0.00 0.00 0.00 3.50
6507 7500 9.836864 ATTCAGAAAAGAAAGCATTAAAAGGTT 57.163 25.926 0.00 0.00 0.00 3.50
6508 7501 9.665719 TTCAGAAAAGAAAGCATTAAAAGGTTT 57.334 25.926 7.82 7.82 39.17 3.27
6511 7504 8.892723 AGAAAAGAAAGCATTAAAAGGTTTTGG 58.107 29.630 9.04 0.00 36.88 3.28
6512 7505 6.618287 AAGAAAGCATTAAAAGGTTTTGGC 57.382 33.333 9.04 0.30 36.88 4.52
6513 7506 5.063204 AGAAAGCATTAAAAGGTTTTGGCC 58.937 37.500 0.00 0.00 36.88 5.36
6514 7507 4.429854 AAGCATTAAAAGGTTTTGGCCA 57.570 36.364 0.00 0.00 0.00 5.36
6515 7508 4.429854 AGCATTAAAAGGTTTTGGCCAA 57.570 36.364 16.05 16.05 0.00 4.52
6517 7510 3.058293 GCATTAAAAGGTTTTGGCCAAGC 60.058 43.478 19.48 15.24 0.00 4.01
6518 7511 2.517650 TAAAAGGTTTTGGCCAAGCG 57.482 45.000 19.48 0.00 0.00 4.68
6519 7512 0.539518 AAAAGGTTTTGGCCAAGCGT 59.460 45.000 19.48 14.05 0.00 5.07
6521 7514 2.050442 GGTTTTGGCCAAGCGTCG 60.050 61.111 19.48 0.00 0.00 5.12
6522 7515 2.050442 GTTTTGGCCAAGCGTCGG 60.050 61.111 19.48 0.00 0.00 4.79
6530 7523 4.717629 CAAGCGTCGGCGACCTCA 62.718 66.667 31.86 0.00 46.35 3.86
6531 7524 4.421479 AAGCGTCGGCGACCTCAG 62.421 66.667 31.86 19.71 46.35 3.35
6534 7527 3.432588 CGTCGGCGACCTCAGACT 61.433 66.667 31.86 0.00 41.33 3.24
6535 7528 2.486042 GTCGGCGACCTCAGACTC 59.514 66.667 28.72 0.05 0.00 3.36
6536 7529 2.033602 TCGGCGACCTCAGACTCA 59.966 61.111 4.99 0.00 0.00 3.41
6537 7530 1.602605 TCGGCGACCTCAGACTCAA 60.603 57.895 4.99 0.00 0.00 3.02
6538 7531 1.176619 TCGGCGACCTCAGACTCAAA 61.177 55.000 4.99 0.00 0.00 2.69
6539 7532 0.108615 CGGCGACCTCAGACTCAAAT 60.109 55.000 0.00 0.00 0.00 2.32
6540 7533 1.646189 GGCGACCTCAGACTCAAATC 58.354 55.000 0.00 0.00 0.00 2.17
6543 7536 1.402852 CGACCTCAGACTCAAATCGCA 60.403 52.381 0.00 0.00 0.00 5.10
6545 7538 1.066573 ACCTCAGACTCAAATCGCAGG 60.067 52.381 0.00 0.00 0.00 4.85
6546 7539 1.205655 CCTCAGACTCAAATCGCAGGA 59.794 52.381 0.00 0.00 0.00 3.86
6547 7540 2.354103 CCTCAGACTCAAATCGCAGGAA 60.354 50.000 0.00 0.00 0.00 3.36
6548 7541 3.529533 CTCAGACTCAAATCGCAGGAAT 58.470 45.455 0.00 0.00 0.00 3.01
6549 7542 3.937706 CTCAGACTCAAATCGCAGGAATT 59.062 43.478 0.00 0.00 0.00 2.17
6550 7543 3.686241 TCAGACTCAAATCGCAGGAATTG 59.314 43.478 0.00 0.00 34.93 2.32
6562 7555 3.655276 CAGGAATTGCAAGCTCAGTTT 57.345 42.857 4.94 0.00 0.00 2.66
6563 7556 3.314553 CAGGAATTGCAAGCTCAGTTTG 58.685 45.455 4.94 0.00 0.00 2.93
6564 7557 2.064014 GGAATTGCAAGCTCAGTTTGC 58.936 47.619 18.70 18.70 46.96 3.68
6566 7559 0.038892 ATTGCAAGCTCAGTTTGCCG 60.039 50.000 22.06 0.00 46.41 5.69
6567 7560 1.383456 TTGCAAGCTCAGTTTGCCGT 61.383 50.000 22.06 0.00 46.41 5.68
6568 7561 1.081840 GCAAGCTCAGTTTGCCGTC 60.082 57.895 15.02 0.00 42.40 4.79
6569 7562 1.576421 CAAGCTCAGTTTGCCGTCC 59.424 57.895 0.00 0.00 0.00 4.79
6570 7563 1.961277 AAGCTCAGTTTGCCGTCCG 60.961 57.895 0.00 0.00 0.00 4.79
6571 7564 2.660258 AAGCTCAGTTTGCCGTCCGT 62.660 55.000 0.00 0.00 0.00 4.69
6572 7565 2.251642 GCTCAGTTTGCCGTCCGTT 61.252 57.895 0.00 0.00 0.00 4.44
6573 7566 1.860078 CTCAGTTTGCCGTCCGTTC 59.140 57.895 0.00 0.00 0.00 3.95
6574 7567 1.566018 CTCAGTTTGCCGTCCGTTCC 61.566 60.000 0.00 0.00 0.00 3.62
6575 7568 1.890041 CAGTTTGCCGTCCGTTCCA 60.890 57.895 0.00 0.00 0.00 3.53
6576 7569 1.153127 AGTTTGCCGTCCGTTCCAA 60.153 52.632 0.00 0.00 0.00 3.53
6579 7572 0.748729 TTTGCCGTCCGTTCCAAAGT 60.749 50.000 0.00 0.00 0.00 2.66
6580 7573 0.748729 TTGCCGTCCGTTCCAAAGTT 60.749 50.000 0.00 0.00 0.00 2.66
6581 7574 0.748729 TGCCGTCCGTTCCAAAGTTT 60.749 50.000 0.00 0.00 0.00 2.66
6616 7609 1.533625 CTTTGATGAAGGCCGTTCCA 58.466 50.000 0.00 0.00 37.29 3.53
6617 7610 1.885887 CTTTGATGAAGGCCGTTCCAA 59.114 47.619 0.00 0.00 37.29 3.53
6618 7611 1.533625 TTGATGAAGGCCGTTCCAAG 58.466 50.000 0.00 0.00 37.29 3.61
6619 7612 0.322456 TGATGAAGGCCGTTCCAAGG 60.322 55.000 0.00 0.00 37.29 3.61
6620 7613 0.035439 GATGAAGGCCGTTCCAAGGA 60.035 55.000 0.00 0.00 37.29 3.36
6621 7614 0.404040 ATGAAGGCCGTTCCAAGGAA 59.596 50.000 0.00 0.00 37.29 3.36
6622 7615 0.183971 TGAAGGCCGTTCCAAGGAAA 59.816 50.000 2.55 0.00 35.75 3.13
6623 7616 1.203001 TGAAGGCCGTTCCAAGGAAAT 60.203 47.619 2.55 0.00 35.75 2.17
6624 7617 1.893137 GAAGGCCGTTCCAAGGAAATT 59.107 47.619 2.55 0.00 35.75 1.82
6625 7618 1.256812 AGGCCGTTCCAAGGAAATTG 58.743 50.000 2.55 0.00 38.74 2.32
6626 7619 1.203001 AGGCCGTTCCAAGGAAATTGA 60.203 47.619 2.55 0.00 41.83 2.57
6627 7620 1.202348 GGCCGTTCCAAGGAAATTGAG 59.798 52.381 2.55 0.00 41.83 3.02
6628 7621 1.886542 GCCGTTCCAAGGAAATTGAGT 59.113 47.619 2.55 0.00 41.83 3.41
6629 7622 2.296190 GCCGTTCCAAGGAAATTGAGTT 59.704 45.455 2.55 0.00 41.83 3.01
6630 7623 3.857010 GCCGTTCCAAGGAAATTGAGTTG 60.857 47.826 2.55 0.00 41.83 3.16
6631 7624 3.305335 CCGTTCCAAGGAAATTGAGTTGG 60.305 47.826 2.55 6.62 41.83 3.77
6632 7625 3.305335 CGTTCCAAGGAAATTGAGTTGGG 60.305 47.826 2.55 0.00 41.83 4.12
6633 7626 2.247358 TCCAAGGAAATTGAGTTGGGC 58.753 47.619 11.23 0.00 41.83 5.36
6634 7627 1.276138 CCAAGGAAATTGAGTTGGGCC 59.724 52.381 0.00 0.00 41.83 5.80
6635 7628 1.969923 CAAGGAAATTGAGTTGGGCCA 59.030 47.619 0.00 0.00 41.83 5.36
6636 7629 2.368221 CAAGGAAATTGAGTTGGGCCAA 59.632 45.455 16.66 16.66 41.83 4.52
6637 7630 2.688477 AGGAAATTGAGTTGGGCCAAA 58.312 42.857 22.82 5.53 0.00 3.28
6638 7631 3.044894 AGGAAATTGAGTTGGGCCAAAA 58.955 40.909 22.82 12.70 0.00 2.44
6639 7632 3.652387 AGGAAATTGAGTTGGGCCAAAAT 59.348 39.130 22.82 14.59 0.00 1.82
6640 7633 3.752747 GGAAATTGAGTTGGGCCAAAATG 59.247 43.478 22.82 0.00 0.00 2.32
6641 7634 4.388485 GAAATTGAGTTGGGCCAAAATGT 58.612 39.130 22.82 12.53 0.00 2.71
6642 7635 2.906691 TTGAGTTGGGCCAAAATGTG 57.093 45.000 22.82 0.00 0.00 3.21
6643 7636 2.079170 TGAGTTGGGCCAAAATGTGA 57.921 45.000 22.82 0.00 0.00 3.58
6644 7637 2.607499 TGAGTTGGGCCAAAATGTGAT 58.393 42.857 22.82 0.80 0.00 3.06
6645 7638 3.772387 TGAGTTGGGCCAAAATGTGATA 58.228 40.909 22.82 0.00 0.00 2.15
6646 7639 4.352009 TGAGTTGGGCCAAAATGTGATAT 58.648 39.130 22.82 0.00 0.00 1.63
6647 7640 4.160065 TGAGTTGGGCCAAAATGTGATATG 59.840 41.667 22.82 0.00 0.00 1.78
6648 7641 4.352009 AGTTGGGCCAAAATGTGATATGA 58.648 39.130 22.82 0.00 0.00 2.15
6649 7642 4.964262 AGTTGGGCCAAAATGTGATATGAT 59.036 37.500 22.82 0.00 0.00 2.45
6650 7643 6.135454 AGTTGGGCCAAAATGTGATATGATA 58.865 36.000 22.82 0.00 0.00 2.15
6651 7644 6.610830 AGTTGGGCCAAAATGTGATATGATAA 59.389 34.615 22.82 0.00 0.00 1.75
6652 7645 7.125507 AGTTGGGCCAAAATGTGATATGATAAA 59.874 33.333 22.82 0.00 0.00 1.40
6653 7646 7.429374 TGGGCCAAAATGTGATATGATAAAA 57.571 32.000 2.13 0.00 0.00 1.52
6654 7647 7.499292 TGGGCCAAAATGTGATATGATAAAAG 58.501 34.615 2.13 0.00 0.00 2.27
6655 7648 7.344093 TGGGCCAAAATGTGATATGATAAAAGA 59.656 33.333 2.13 0.00 0.00 2.52
6656 7649 8.203485 GGGCCAAAATGTGATATGATAAAAGAA 58.797 33.333 4.39 0.00 0.00 2.52
6657 7650 9.598517 GGCCAAAATGTGATATGATAAAAGAAA 57.401 29.630 0.00 0.00 0.00 2.52
6664 7657 7.693952 TGTGATATGATAAAAGAAAAGACGGC 58.306 34.615 0.00 0.00 0.00 5.68
6665 7658 7.335673 TGTGATATGATAAAAGAAAAGACGGCA 59.664 33.333 0.00 0.00 0.00 5.69
6666 7659 8.345565 GTGATATGATAAAAGAAAAGACGGCAT 58.654 33.333 0.00 0.00 0.00 4.40
6667 7660 8.902806 TGATATGATAAAAGAAAAGACGGCATT 58.097 29.630 0.00 0.00 0.00 3.56
6668 7661 9.736023 GATATGATAAAAGAAAAGACGGCATTT 57.264 29.630 0.00 0.00 0.00 2.32
6669 7662 9.736023 ATATGATAAAAGAAAAGACGGCATTTC 57.264 29.630 10.97 10.97 36.11 2.17
6670 7663 6.386654 TGATAAAAGAAAAGACGGCATTTCC 58.613 36.000 15.03 0.01 36.44 3.13
6671 7664 4.664150 AAAAGAAAAGACGGCATTTCCA 57.336 36.364 15.03 0.00 36.44 3.53
6672 7665 4.871933 AAAGAAAAGACGGCATTTCCAT 57.128 36.364 15.03 2.39 36.44 3.41
6673 7666 4.440839 AAGAAAAGACGGCATTTCCATC 57.559 40.909 15.03 0.00 36.44 3.51
6674 7667 2.420022 AGAAAAGACGGCATTTCCATCG 59.580 45.455 15.03 0.00 36.44 3.84
6675 7668 0.451783 AAAGACGGCATTTCCATCGC 59.548 50.000 0.00 0.00 30.96 4.58
6676 7669 0.392998 AAGACGGCATTTCCATCGCT 60.393 50.000 0.00 0.00 30.96 4.93
6677 7670 0.464036 AGACGGCATTTCCATCGCTA 59.536 50.000 0.00 0.00 30.96 4.26
6678 7671 1.070758 AGACGGCATTTCCATCGCTAT 59.929 47.619 0.00 0.00 30.96 2.97
6679 7672 1.461127 GACGGCATTTCCATCGCTATC 59.539 52.381 0.00 0.00 34.01 2.08
6680 7673 1.202639 ACGGCATTTCCATCGCTATCA 60.203 47.619 0.00 0.00 34.01 2.15
6681 7674 1.195448 CGGCATTTCCATCGCTATCAC 59.805 52.381 0.00 0.00 34.01 3.06
6682 7675 2.498167 GGCATTTCCATCGCTATCACT 58.502 47.619 0.00 0.00 34.01 3.41
6683 7676 2.225019 GGCATTTCCATCGCTATCACTG 59.775 50.000 0.00 0.00 34.01 3.66
6684 7677 2.350197 GCATTTCCATCGCTATCACTGC 60.350 50.000 0.00 0.00 0.00 4.40
6685 7678 2.689553 TTTCCATCGCTATCACTGCA 57.310 45.000 0.00 0.00 0.00 4.41
6686 7679 2.689553 TTCCATCGCTATCACTGCAA 57.310 45.000 0.00 0.00 0.00 4.08
6687 7680 2.229675 TCCATCGCTATCACTGCAAG 57.770 50.000 0.00 0.00 42.29 4.01
6688 7681 1.202568 TCCATCGCTATCACTGCAAGG 60.203 52.381 0.00 0.00 39.30 3.61
6689 7682 1.202568 CCATCGCTATCACTGCAAGGA 60.203 52.381 0.00 0.00 39.30 3.36
6690 7683 2.133553 CATCGCTATCACTGCAAGGAG 58.866 52.381 0.00 0.00 39.30 3.69
6691 7684 0.179100 TCGCTATCACTGCAAGGAGC 60.179 55.000 0.00 0.00 45.96 4.70
6692 7685 1.156645 CGCTATCACTGCAAGGAGCC 61.157 60.000 0.00 0.00 44.83 4.70
6693 7686 0.817229 GCTATCACTGCAAGGAGCCC 60.817 60.000 0.00 0.00 44.83 5.19
6694 7687 0.531532 CTATCACTGCAAGGAGCCCG 60.532 60.000 0.00 0.00 44.83 6.13
6695 7688 1.264749 TATCACTGCAAGGAGCCCGT 61.265 55.000 0.00 0.00 44.83 5.28
6696 7689 2.129555 ATCACTGCAAGGAGCCCGTT 62.130 55.000 0.00 0.00 44.83 4.44
6697 7690 1.898574 CACTGCAAGGAGCCCGTTT 60.899 57.895 0.00 0.00 44.83 3.60
6698 7691 1.600916 ACTGCAAGGAGCCCGTTTC 60.601 57.895 0.00 0.00 44.83 2.78
6699 7692 2.282180 TGCAAGGAGCCCGTTTCC 60.282 61.111 0.00 0.00 44.83 3.13
6700 7693 2.034221 GCAAGGAGCCCGTTTCCT 59.966 61.111 0.00 0.00 46.97 3.36
6701 7694 2.041115 GCAAGGAGCCCGTTTCCTC 61.041 63.158 0.72 0.00 44.24 3.71
6702 7695 1.374947 CAAGGAGCCCGTTTCCTCA 59.625 57.895 0.72 0.00 44.24 3.86
6703 7696 0.035056 CAAGGAGCCCGTTTCCTCAT 60.035 55.000 0.72 0.00 44.24 2.90
6704 7697 0.253327 AAGGAGCCCGTTTCCTCATC 59.747 55.000 0.72 0.00 44.24 2.92
6705 7698 1.521681 GGAGCCCGTTTCCTCATCG 60.522 63.158 0.00 0.00 0.00 3.84
6706 7699 1.218316 GAGCCCGTTTCCTCATCGT 59.782 57.895 0.00 0.00 0.00 3.73
6707 7700 1.079127 AGCCCGTTTCCTCATCGTG 60.079 57.895 0.00 0.00 0.00 4.35
6708 7701 2.106683 GCCCGTTTCCTCATCGTGG 61.107 63.158 0.00 0.00 0.00 4.94
6709 7702 2.106683 CCCGTTTCCTCATCGTGGC 61.107 63.158 0.00 0.00 0.00 5.01
6710 7703 2.452813 CCGTTTCCTCATCGTGGCG 61.453 63.158 0.00 0.00 0.00 5.69
6711 7704 1.736645 CGTTTCCTCATCGTGGCGT 60.737 57.895 0.00 0.00 0.00 5.68
6712 7705 1.683790 CGTTTCCTCATCGTGGCGTC 61.684 60.000 0.00 0.00 0.00 5.19
6713 7706 1.079405 TTTCCTCATCGTGGCGTCC 60.079 57.895 0.00 0.00 0.00 4.79
6714 7707 2.829043 TTTCCTCATCGTGGCGTCCG 62.829 60.000 0.00 0.00 0.00 4.79
6803 7796 1.141657 CATCCACACGAATCCATCCCT 59.858 52.381 0.00 0.00 0.00 4.20
6805 7798 0.179045 CCACACGAATCCATCCCTCC 60.179 60.000 0.00 0.00 0.00 4.30
6806 7799 0.179045 CACACGAATCCATCCCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
6809 7802 2.883828 CGAATCCATCCCTCCCCCG 61.884 68.421 0.00 0.00 0.00 5.73
6810 7803 1.461461 GAATCCATCCCTCCCCCGA 60.461 63.158 0.00 0.00 0.00 5.14
6811 7804 1.462238 AATCCATCCCTCCCCCGAG 60.462 63.158 0.00 0.00 35.72 4.63
6812 7805 1.973346 AATCCATCCCTCCCCCGAGA 61.973 60.000 0.00 0.00 38.52 4.04
6813 7806 2.681273 ATCCATCCCTCCCCCGAGAC 62.681 65.000 0.00 0.00 38.52 3.36
6814 7807 2.844839 CATCCCTCCCCCGAGACC 60.845 72.222 0.00 0.00 38.52 3.85
6815 7808 4.541648 ATCCCTCCCCCGAGACCG 62.542 72.222 0.00 0.00 38.52 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.455089 ACTAAGTGCTAGTAACGAATTATCGCG 61.455 40.741 0.00 0.00 44.88 5.87
3 4 6.636044 ACTAAGTGCTAGTAACGAATTATCGC 59.364 38.462 0.00 0.00 44.88 4.58
4 5 9.315680 CTACTAAGTGCTAGTAACGAATTATCG 57.684 37.037 0.00 0.00 46.13 2.92
5 6 9.116054 GCTACTAAGTGCTAGTAACGAATTATC 57.884 37.037 0.00 0.00 41.58 1.75
6 7 8.848182 AGCTACTAAGTGCTAGTAACGAATTAT 58.152 33.333 0.00 0.00 41.58 1.28
7 8 8.127327 CAGCTACTAAGTGCTAGTAACGAATTA 58.873 37.037 0.00 0.00 41.58 1.40
8 9 6.973474 CAGCTACTAAGTGCTAGTAACGAATT 59.027 38.462 0.00 0.00 41.58 2.17
9 10 6.095160 ACAGCTACTAAGTGCTAGTAACGAAT 59.905 38.462 0.00 0.00 41.58 3.34
10 11 5.413833 ACAGCTACTAAGTGCTAGTAACGAA 59.586 40.000 0.00 0.00 41.58 3.85
11 12 4.940046 ACAGCTACTAAGTGCTAGTAACGA 59.060 41.667 0.00 0.00 41.58 3.85
12 13 5.232610 ACAGCTACTAAGTGCTAGTAACG 57.767 43.478 0.00 0.00 41.58 3.18
15 16 8.566260 GCTAATTACAGCTACTAAGTGCTAGTA 58.434 37.037 0.00 0.00 41.35 1.82
16 17 7.427214 GCTAATTACAGCTACTAAGTGCTAGT 58.573 38.462 0.00 0.00 43.58 2.57
17 18 6.864165 GGCTAATTACAGCTACTAAGTGCTAG 59.136 42.308 0.44 0.00 41.50 3.42
18 19 6.322969 TGGCTAATTACAGCTACTAAGTGCTA 59.677 38.462 0.44 0.00 41.50 3.49
19 20 5.128827 TGGCTAATTACAGCTACTAAGTGCT 59.871 40.000 0.44 0.00 41.50 4.40
20 21 5.357257 TGGCTAATTACAGCTACTAAGTGC 58.643 41.667 0.44 0.00 41.50 4.40
21 22 7.333423 TGTTTGGCTAATTACAGCTACTAAGTG 59.667 37.037 0.44 0.00 41.50 3.16
22 23 7.333672 GTGTTTGGCTAATTACAGCTACTAAGT 59.666 37.037 0.44 0.00 41.50 2.24
23 24 7.201617 GGTGTTTGGCTAATTACAGCTACTAAG 60.202 40.741 8.94 0.00 41.50 2.18
24 25 6.596497 GGTGTTTGGCTAATTACAGCTACTAA 59.404 38.462 8.94 0.00 41.50 2.24
25 26 6.070424 AGGTGTTTGGCTAATTACAGCTACTA 60.070 38.462 15.17 0.00 44.69 1.82
26 27 4.941873 GGTGTTTGGCTAATTACAGCTACT 59.058 41.667 8.94 0.00 41.50 2.57
27 28 4.941873 AGGTGTTTGGCTAATTACAGCTAC 59.058 41.667 15.17 0.00 44.69 3.58
28 29 5.174037 AGGTGTTTGGCTAATTACAGCTA 57.826 39.130 15.17 0.00 44.69 3.32
29 30 4.034285 AGGTGTTTGGCTAATTACAGCT 57.966 40.909 12.04 12.04 42.56 4.24
30 31 4.698304 TGTAGGTGTTTGGCTAATTACAGC 59.302 41.667 8.32 8.32 41.02 4.40
31 32 6.597672 TCATGTAGGTGTTTGGCTAATTACAG 59.402 38.462 0.00 0.00 0.00 2.74
32 33 6.477253 TCATGTAGGTGTTTGGCTAATTACA 58.523 36.000 0.00 0.00 0.00 2.41
33 34 6.995511 TCATGTAGGTGTTTGGCTAATTAC 57.004 37.500 0.00 0.00 0.00 1.89
48 49 1.139989 CGCCGTTGCTATCATGTAGG 58.860 55.000 0.00 0.00 34.43 3.18
106 107 7.356154 CGAGTTGTATTAAAGCGTGAAAAACAC 60.356 37.037 0.00 0.00 45.11 3.32
107 108 6.629649 CGAGTTGTATTAAAGCGTGAAAAACA 59.370 34.615 0.00 0.00 0.00 2.83
108 109 6.630045 ACGAGTTGTATTAAAGCGTGAAAAAC 59.370 34.615 0.00 0.00 0.00 2.43
144 145 2.824041 GTGCGTCGGCCCATGAAT 60.824 61.111 0.00 0.00 38.85 2.57
436 467 7.027161 CCCCGAAAAATAAGAACATAGTTGTG 58.973 38.462 0.00 0.00 35.83 3.33
438 469 7.385778 TCCCCGAAAAATAAGAACATAGTTG 57.614 36.000 0.00 0.00 0.00 3.16
469 500 0.035739 ACGTTACAGGTTTCGGCCAT 59.964 50.000 2.24 0.00 0.00 4.40
470 501 0.881159 CACGTTACAGGTTTCGGCCA 60.881 55.000 2.24 0.00 0.00 5.36
472 503 1.571215 CCCACGTTACAGGTTTCGGC 61.571 60.000 0.00 0.00 0.00 5.54
474 505 1.142474 GTCCCACGTTACAGGTTTCG 58.858 55.000 0.00 0.00 0.00 3.46
475 506 2.538512 AGTCCCACGTTACAGGTTTC 57.461 50.000 0.00 0.00 0.00 2.78
481 512 4.669206 TGAAACTAAGTCCCACGTTACA 57.331 40.909 0.00 0.00 0.00 2.41
487 518 6.231211 TGAGATTCTTGAAACTAAGTCCCAC 58.769 40.000 0.00 0.00 0.00 4.61
514 949 7.978982 ACTATTTTCATCGTTGGATTTCTCAG 58.021 34.615 0.00 0.00 0.00 3.35
549 984 5.219633 GTTTATCTGTTGAACCATGCGTTT 58.780 37.500 0.00 0.00 33.74 3.60
597 1032 8.612619 TCATTTGTTGTAGTCTGAGAGTTTTTC 58.387 33.333 0.00 0.00 0.00 2.29
611 1046 3.840209 CGAATGTGCGTCATTTGTTGTAG 59.160 43.478 8.05 0.00 45.49 2.74
631 1066 1.017177 GCTGACAAATGGCGTACCGA 61.017 55.000 0.00 0.00 39.70 4.69
645 1080 1.410517 TCCATCTTCTCGGATGCTGAC 59.589 52.381 0.00 0.00 41.04 3.51
685 1127 3.759086 TGACTGACACTAGTTAGGAGCTG 59.241 47.826 0.00 0.00 35.79 4.24
691 1133 4.001652 TCCGACTGACTGACACTAGTTAG 58.998 47.826 0.00 0.00 39.44 2.34
719 1161 4.880696 AGCTGAAATCAGTGATTAAGAGGC 59.119 41.667 23.27 19.08 45.45 4.70
720 1162 5.879223 ACAGCTGAAATCAGTGATTAAGAGG 59.121 40.000 23.35 17.70 45.45 3.69
728 1172 2.294233 GGCAAACAGCTGAAATCAGTGA 59.706 45.455 23.35 0.00 45.45 3.41
768 1212 3.691342 TCACCCGGTTGAGCTCCG 61.691 66.667 12.15 8.44 46.49 4.63
778 1222 2.983592 GGCTTTGTGGTCACCCGG 60.984 66.667 0.00 0.00 0.00 5.73
779 1223 3.353836 CGGCTTTGTGGTCACCCG 61.354 66.667 0.00 0.95 0.00 5.28
780 1224 2.983592 CCGGCTTTGTGGTCACCC 60.984 66.667 0.00 0.00 0.00 4.61
783 1227 4.966787 GGGCCGGCTTTGTGGTCA 62.967 66.667 28.56 0.00 0.00 4.02
785 1229 4.974721 CTGGGCCGGCTTTGTGGT 62.975 66.667 28.56 0.00 0.00 4.16
789 1233 3.830192 GATGCTGGGCCGGCTTTG 61.830 66.667 35.51 16.90 36.58 2.77
790 1234 4.365111 TGATGCTGGGCCGGCTTT 62.365 61.111 35.51 23.87 36.58 3.51
791 1235 4.809496 CTGATGCTGGGCCGGCTT 62.809 66.667 35.51 30.10 36.58 4.35
838 1291 4.803426 GGCTCGTGTCTCCAGCCG 62.803 72.222 0.00 0.00 43.35 5.52
874 1337 1.329599 GCGGACTCGTGTCTTGTTTTT 59.670 47.619 16.45 0.00 42.54 1.94
878 1341 2.050351 CGCGGACTCGTGTCTTGT 60.050 61.111 16.45 0.00 42.54 3.16
960 1436 1.345715 GGATGGGTCGGGTGAGGATT 61.346 60.000 0.00 0.00 0.00 3.01
969 1445 4.489771 GGGTGCTGGATGGGTCGG 62.490 72.222 0.00 0.00 0.00 4.79
987 1464 0.034767 ATGTGGGCTGTGACTGGATG 60.035 55.000 0.00 0.00 0.00 3.51
988 1465 0.254178 GATGTGGGCTGTGACTGGAT 59.746 55.000 0.00 0.00 0.00 3.41
989 1466 1.679311 GATGTGGGCTGTGACTGGA 59.321 57.895 0.00 0.00 0.00 3.86
991 1468 2.393768 GCGATGTGGGCTGTGACTG 61.394 63.158 0.00 0.00 0.00 3.51
1042 1519 1.148446 GGAGTTTTAGGGTTTGGGGGT 59.852 52.381 0.00 0.00 0.00 4.95
1043 1520 1.551560 GGGAGTTTTAGGGTTTGGGGG 60.552 57.143 0.00 0.00 0.00 5.40
1044 1521 1.148236 TGGGAGTTTTAGGGTTTGGGG 59.852 52.381 0.00 0.00 0.00 4.96
1045 1522 2.244695 GTGGGAGTTTTAGGGTTTGGG 58.755 52.381 0.00 0.00 0.00 4.12
1046 1523 2.244695 GGTGGGAGTTTTAGGGTTTGG 58.755 52.381 0.00 0.00 0.00 3.28
1047 1524 2.244695 GGGTGGGAGTTTTAGGGTTTG 58.755 52.381 0.00 0.00 0.00 2.93
1060 1537 2.360600 CGCCATTTTCGGGTGGGA 60.361 61.111 0.00 0.00 36.00 4.37
1152 1635 2.125106 AAGTCGATGAAGCCCGGC 60.125 61.111 0.00 0.00 0.00 6.13
1473 1956 3.119709 GACGAGCCTGGAGAGCGAG 62.120 68.421 0.00 0.00 34.64 5.03
1539 2022 0.031585 GGCGCATGTACTCGGATACA 59.968 55.000 10.83 2.73 39.35 2.29
1671 2154 1.186200 CGTCCTTGGAGGTGATGAGA 58.814 55.000 1.54 0.00 36.53 3.27
1734 2217 2.852075 AACTTCCCGTCTGCCCCA 60.852 61.111 0.00 0.00 0.00 4.96
1737 2220 0.458025 CTACGAACTTCCCGTCTGCC 60.458 60.000 0.00 0.00 40.95 4.85
1839 2322 0.687757 AGTTCCCCTGCGAGCTATCA 60.688 55.000 0.00 0.00 0.00 2.15
1944 2427 3.057104 CAGCAATCAAATTCTGTGCCTGA 60.057 43.478 0.00 0.00 35.80 3.86
2037 2520 6.550108 GTGAGAAATATACCTGTCCTCTACCA 59.450 42.308 0.00 0.00 0.00 3.25
2062 2548 0.040204 ATCAAGGGGGCAGGAGTTTG 59.960 55.000 0.00 0.00 0.00 2.93
2087 2573 9.816354 AAGTTAACAAGCATGAAAACAAACTAT 57.184 25.926 8.61 0.00 31.54 2.12
2115 2601 6.035975 AGCAACTATTTGACAGCAAACAAAAC 59.964 34.615 0.00 0.00 45.94 2.43
2122 2608 5.005740 AGATGAGCAACTATTTGACAGCAA 58.994 37.500 0.00 0.00 34.24 3.91
2253 2739 9.052759 GTTTCCAGTAACTTATCAGACTTTTCA 57.947 33.333 0.00 0.00 0.00 2.69
2295 2783 3.777106 TGGCATGAATATGGGAGAGAC 57.223 47.619 0.00 0.00 34.79 3.36
2300 2788 2.948979 GACGTTTGGCATGAATATGGGA 59.051 45.455 0.00 0.00 34.79 4.37
2308 2796 5.092554 TCTAAATAGGACGTTTGGCATGA 57.907 39.130 0.00 0.00 0.00 3.07
2312 2800 8.828688 ATAACTATCTAAATAGGACGTTTGGC 57.171 34.615 0.00 0.00 39.43 4.52
2375 2863 5.348724 CGCATACTGCAATACCACTATAAGG 59.651 44.000 0.00 0.00 45.36 2.69
2385 2873 3.325870 TCATAGCCGCATACTGCAATAC 58.674 45.455 0.00 0.00 45.36 1.89
2403 2891 1.178534 CGTTGGGTGGCCACTTTCAT 61.179 55.000 33.91 0.00 0.00 2.57
2439 2930 8.255394 AGCTCAATTATTTTTGCATGGTAAAC 57.745 30.769 0.00 0.00 0.00 2.01
2444 2935 6.456449 GCTTGAGCTCAATTATTTTTGCATGG 60.456 38.462 28.57 12.98 38.21 3.66
2473 2964 6.369065 GTGAATTCAGAAAGTCGATTAGTGGT 59.631 38.462 8.80 0.00 32.18 4.16
2474 2965 6.368791 TGTGAATTCAGAAAGTCGATTAGTGG 59.631 38.462 8.80 0.00 32.18 4.00
2475 2966 7.095649 TGTGTGAATTCAGAAAGTCGATTAGTG 60.096 37.037 8.80 0.00 32.18 2.74
2476 2967 6.929049 TGTGTGAATTCAGAAAGTCGATTAGT 59.071 34.615 8.80 0.00 32.18 2.24
2477 2968 7.351414 TGTGTGAATTCAGAAAGTCGATTAG 57.649 36.000 8.80 0.00 32.18 1.73
2478 2969 7.905604 ATGTGTGAATTCAGAAAGTCGATTA 57.094 32.000 8.80 0.00 32.18 1.75
2515 3008 0.733909 GGCATTTTTCCTGACAGCGC 60.734 55.000 0.00 0.00 0.00 5.92
2517 3010 1.135575 CGAGGCATTTTTCCTGACAGC 60.136 52.381 0.00 0.00 33.24 4.40
2520 3013 1.880027 ACACGAGGCATTTTTCCTGAC 59.120 47.619 0.00 0.00 33.24 3.51
2528 3021 1.067635 GCAAATGGACACGAGGCATTT 60.068 47.619 0.00 0.00 0.00 2.32
2529 3022 0.527565 GCAAATGGACACGAGGCATT 59.472 50.000 0.00 0.00 0.00 3.56
2553 3046 0.320771 ATCCACACTCGTTCCTGTGC 60.321 55.000 0.00 0.00 37.12 4.57
2567 3060 4.022068 CCATATGGTTTACATGGCATCCAC 60.022 45.833 14.09 0.00 40.82 4.02
2602 3112 9.791820 TCAAAATGTGACATATTAAGCATGAAG 57.208 29.630 0.00 0.00 0.00 3.02
2628 3138 9.076781 CAAATTTATTTTCCAAATTCCAACCCT 57.923 29.630 0.00 0.00 35.15 4.34
2797 3308 7.445096 TCAAACTAGATTGCAGATCTGAACAAA 59.555 33.333 27.04 13.82 0.00 2.83
2807 3318 6.095860 CCATCCAAATCAAACTAGATTGCAGA 59.904 38.462 7.82 1.40 38.21 4.26
2905 3416 0.388907 CCAGCAGCCATTTGAAACCG 60.389 55.000 0.00 0.00 0.00 4.44
2922 3433 5.336293 CCATACAATGTGTTAACATGCACCA 60.336 40.000 12.26 4.92 46.58 4.17
2932 3443 4.707934 TCGGTCTCTCCATACAATGTGTTA 59.292 41.667 0.00 0.00 35.57 2.41
2945 3456 5.420409 ACATCAAATTAGTTCGGTCTCTCC 58.580 41.667 0.00 0.00 0.00 3.71
2986 3497 1.318576 GTAAACAGCAGTGGCCTGTT 58.681 50.000 3.32 9.56 42.56 3.16
3174 3685 3.747529 CCCTGTTGCAAAAGGCTAAAATG 59.252 43.478 27.94 10.40 45.15 2.32
3334 4023 4.913968 ACTACTATGTGGCCATTAAGGGAT 59.086 41.667 9.72 0.00 38.09 3.85
3436 4126 7.480760 ACTGGCCAATACATTTGAATACTTT 57.519 32.000 7.01 0.00 0.00 2.66
3456 4146 5.485662 GCATAAGGCTACACTTAAACTGG 57.514 43.478 0.00 0.00 40.25 4.00
3471 4161 8.788325 AAAGTACAGTTAAACCTAGCATAAGG 57.212 34.615 0.00 0.00 42.82 2.69
3505 4195 8.421002 AGTAAAATGGCAAACTTCAGTTACAAT 58.579 29.630 0.00 0.00 37.25 2.71
3944 4634 8.796475 TCTAGAAAAGAAATAACTGCTTTGCAT 58.204 29.630 0.00 0.00 38.13 3.96
4033 4724 2.291465 TCAGCTGCAGATGTGAAAACAC 59.709 45.455 29.56 1.59 32.47 3.32
4254 4945 6.016024 ACTGCACAATAGCTTTCAATCTTTCA 60.016 34.615 0.00 0.00 34.99 2.69
4255 4946 6.385033 ACTGCACAATAGCTTTCAATCTTTC 58.615 36.000 0.00 0.00 34.99 2.62
4256 4947 6.336842 ACTGCACAATAGCTTTCAATCTTT 57.663 33.333 0.00 0.00 34.99 2.52
4257 4948 5.972107 ACTGCACAATAGCTTTCAATCTT 57.028 34.783 0.00 0.00 34.99 2.40
4258 4949 5.474532 TCAACTGCACAATAGCTTTCAATCT 59.525 36.000 0.00 0.00 34.99 2.40
4259 4950 5.570589 GTCAACTGCACAATAGCTTTCAATC 59.429 40.000 0.00 0.00 34.99 2.67
4260 4951 5.009911 TGTCAACTGCACAATAGCTTTCAAT 59.990 36.000 0.00 0.00 34.99 2.57
4261 4952 4.337836 TGTCAACTGCACAATAGCTTTCAA 59.662 37.500 0.00 0.00 34.99 2.69
4370 5061 8.779354 AAACTAGATTCAGTGACAAATACTCC 57.221 34.615 0.00 0.00 0.00 3.85
4511 5202 0.749649 TGTGGATGGCAACCAAACAC 59.250 50.000 18.82 6.62 41.40 3.32
4632 5323 5.568685 TGACTAGCAACTGAGTCTATGAC 57.431 43.478 3.90 0.00 42.21 3.06
4739 5432 2.034124 GCATGTTAGGTTGCCATCCAT 58.966 47.619 0.00 0.00 32.66 3.41
4752 5445 2.656002 AGAGACGCTAGAGGCATGTTA 58.344 47.619 0.91 0.00 41.91 2.41
4761 5454 5.401531 AAACATAACCAAGAGACGCTAGA 57.598 39.130 0.00 0.00 0.00 2.43
4766 5459 2.671396 CCCGAAACATAACCAAGAGACG 59.329 50.000 0.00 0.00 0.00 4.18
4778 5471 2.023788 GCCATGTCCATCCCGAAACAT 61.024 52.381 0.00 0.00 32.73 2.71
4788 5481 4.007457 GCACAGTGCCATGTCCAT 57.993 55.556 15.27 0.00 37.42 3.41
4822 5515 4.536065 CAGTTAGCAAATGAGCGTTGAAA 58.464 39.130 0.00 0.00 40.15 2.69
4872 5668 4.507710 GCAGATCACTGAGTTAATGACCA 58.492 43.478 0.00 0.00 46.03 4.02
4905 5701 0.035881 TGAAGTCTGGGAGCTGCAAG 59.964 55.000 7.79 5.15 0.00 4.01
4912 5709 9.793252 CAATTAAACAAATATGAAGTCTGGGAG 57.207 33.333 0.00 0.00 0.00 4.30
4940 5737 9.516314 CTAAAAATAGGCTATTTTGCAAGGTAC 57.484 33.333 34.07 0.00 44.98 3.34
5076 5873 1.158007 ACCACCCCAGGAAGAACAAT 58.842 50.000 0.00 0.00 0.00 2.71
5122 5920 7.616935 TCTTGAAGAATCAGCAAAAGGGAATAT 59.383 33.333 0.00 0.00 36.78 1.28
5172 5970 6.837992 TGCCGATAATGACAAAGTAAAGTTC 58.162 36.000 0.00 0.00 0.00 3.01
5318 6116 7.340232 AGCAGATAGGTGCAATGATAAAAGAAA 59.660 33.333 0.00 0.00 46.60 2.52
5367 6165 7.814107 TCAACAAACAAGATTAAATGCTCCATC 59.186 33.333 0.00 0.00 0.00 3.51
5372 6170 8.715191 TTTGTCAACAAACAAGATTAAATGCT 57.285 26.923 4.24 0.00 40.55 3.79
5384 6182 6.531503 TGGGACTATTTTTGTCAACAAACA 57.468 33.333 7.78 2.57 44.56 2.83
5399 6197 6.652481 CGCAATAAGATCTGATTTGGGACTAT 59.348 38.462 17.57 0.00 33.54 2.12
5524 6322 4.709250 TGTAACAAGTGCTATGACCACAA 58.291 39.130 0.00 0.00 35.69 3.33
5526 6324 4.152402 CACTGTAACAAGTGCTATGACCAC 59.848 45.833 0.00 0.00 41.05 4.16
5527 6325 4.039852 TCACTGTAACAAGTGCTATGACCA 59.960 41.667 0.00 0.00 45.93 4.02
5528 6326 4.566004 TCACTGTAACAAGTGCTATGACC 58.434 43.478 0.00 0.00 45.93 4.02
5532 6331 6.701340 TCTCATTCACTGTAACAAGTGCTAT 58.299 36.000 0.00 0.00 45.93 2.97
5570 6369 1.746787 GCACTGCACATCATCCATGAA 59.253 47.619 0.00 0.00 40.69 2.57
5617 6416 7.229581 TGAAATGACAAACATCATCCATGAA 57.770 32.000 0.00 0.00 38.40 2.57
5618 6417 6.837471 TGAAATGACAAACATCATCCATGA 57.163 33.333 0.00 0.00 38.40 3.07
5642 6470 4.746535 TGTCAGTTCTGTTACCAAGACA 57.253 40.909 0.00 0.00 32.91 3.41
5645 6575 6.233430 CTGAATGTCAGTTCTGTTACCAAG 57.767 41.667 0.00 0.00 39.58 3.61
5684 6614 1.898154 CCGGTCCTCACCTGGTAAG 59.102 63.158 0.00 0.00 41.17 2.34
5757 6692 3.244700 CGATCAAAGATGGGGGCTAGAAT 60.245 47.826 0.00 0.00 0.00 2.40
5765 6700 1.539065 CGTCCTCGATCAAAGATGGGG 60.539 57.143 0.00 0.00 39.71 4.96
5785 6720 0.811616 CGCAGAGAACCAGTATGCCC 60.812 60.000 0.00 0.00 33.32 5.36
5789 6724 1.618837 ACACACGCAGAGAACCAGTAT 59.381 47.619 0.00 0.00 0.00 2.12
5793 6728 0.531974 GGAACACACGCAGAGAACCA 60.532 55.000 0.00 0.00 0.00 3.67
5879 6814 3.428797 TCGATAGGGGAGCGAACG 58.571 61.111 0.00 0.00 44.42 3.95
5883 6818 1.096416 GGTAGATCGATAGGGGAGCG 58.904 60.000 0.00 0.00 38.67 5.03
5884 6819 1.819903 GTGGTAGATCGATAGGGGAGC 59.180 57.143 0.00 0.00 0.00 4.70
5885 6820 3.443145 AGTGGTAGATCGATAGGGGAG 57.557 52.381 0.00 0.00 0.00 4.30
5886 6821 3.009916 GGTAGTGGTAGATCGATAGGGGA 59.990 52.174 0.00 0.00 0.00 4.81
5887 6822 3.245158 TGGTAGTGGTAGATCGATAGGGG 60.245 52.174 0.00 0.00 0.00 4.79
5888 6823 3.757493 GTGGTAGTGGTAGATCGATAGGG 59.243 52.174 0.00 0.00 0.00 3.53
5889 6824 4.653868 AGTGGTAGTGGTAGATCGATAGG 58.346 47.826 0.00 0.00 0.00 2.57
5909 6847 6.560003 TGATGATGTTACAACCATCCTAGT 57.440 37.500 20.21 0.00 35.72 2.57
5961 6899 3.055094 AGCCATTTCTTACGATGTCCAGT 60.055 43.478 0.00 0.00 0.00 4.00
5962 6900 3.310774 CAGCCATTTCTTACGATGTCCAG 59.689 47.826 0.00 0.00 0.00 3.86
5975 6914 6.090129 TCGCTTTTATTGTTACAGCCATTTC 58.910 36.000 0.00 0.00 0.00 2.17
5997 6936 3.806316 AAGTAGCAAACGGAAACATCG 57.194 42.857 0.00 0.00 0.00 3.84
6035 6975 2.726241 GCACGAAAAAGGACTGAAATGC 59.274 45.455 0.00 0.00 0.00 3.56
6178 7135 0.991355 ACCCACCACCCTGAACTGAA 60.991 55.000 0.00 0.00 0.00 3.02
6180 7137 1.228245 CACCCACCACCCTGAACTG 60.228 63.158 0.00 0.00 0.00 3.16
6181 7138 1.696314 ACACCCACCACCCTGAACT 60.696 57.895 0.00 0.00 0.00 3.01
6214 7178 0.250295 TGCTTGGGAGAAACGACAGG 60.250 55.000 0.00 0.00 0.00 4.00
6252 7216 2.438434 GCAGCCGCAGTATTGGGT 60.438 61.111 1.66 0.00 38.36 4.51
6253 7217 2.438254 TGCAGCCGCAGTATTGGG 60.438 61.111 0.00 0.00 45.36 4.12
6281 7252 0.177604 AGCTCTGGACTGCATGTAGC 59.822 55.000 11.09 3.85 45.96 3.58
6282 7253 1.206610 ACAGCTCTGGACTGCATGTAG 59.793 52.381 9.50 9.50 38.79 2.74
6283 7254 1.269958 ACAGCTCTGGACTGCATGTA 58.730 50.000 1.66 0.00 38.79 2.29
6284 7255 1.066573 GTACAGCTCTGGACTGCATGT 60.067 52.381 5.03 0.00 41.19 3.21
6285 7256 1.066645 TGTACAGCTCTGGACTGCATG 60.067 52.381 12.93 0.00 44.65 4.06
6288 7259 0.605589 AGTGTACAGCTCTGGACTGC 59.394 55.000 12.93 6.56 44.65 4.40
6293 7264 2.234661 TCCAATCAGTGTACAGCTCTGG 59.765 50.000 10.97 7.96 38.75 3.86
6298 7269 3.012518 AGCAATCCAATCAGTGTACAGC 58.987 45.455 0.00 0.00 0.00 4.40
6353 7341 7.443575 AGAATGATAATGATAATGATAGCGGCC 59.556 37.037 0.00 0.00 0.00 6.13
6366 7354 9.638176 AGCTTAACAAGGAAGAATGATAATGAT 57.362 29.630 0.00 0.00 0.00 2.45
6367 7355 9.466497 AAGCTTAACAAGGAAGAATGATAATGA 57.534 29.630 0.00 0.00 0.00 2.57
6369 7357 8.193438 GCAAGCTTAACAAGGAAGAATGATAAT 58.807 33.333 0.00 0.00 0.00 1.28
6370 7358 7.394359 AGCAAGCTTAACAAGGAAGAATGATAA 59.606 33.333 0.00 0.00 0.00 1.75
6432 7425 2.820197 GTTTGGTTCAAGCCCCTCTAAG 59.180 50.000 0.00 0.00 0.00 2.18
6434 7427 1.271163 CGTTTGGTTCAAGCCCCTCTA 60.271 52.381 0.00 0.00 0.00 2.43
6437 7430 0.822121 GACGTTTGGTTCAAGCCCCT 60.822 55.000 0.00 0.00 0.00 4.79
6439 7432 1.534163 GTAGACGTTTGGTTCAAGCCC 59.466 52.381 0.00 0.00 0.00 5.19
6440 7433 2.479275 GAGTAGACGTTTGGTTCAAGCC 59.521 50.000 0.00 0.00 0.00 4.35
6441 7434 3.128349 TGAGTAGACGTTTGGTTCAAGC 58.872 45.455 0.00 0.00 0.00 4.01
6442 7435 3.184581 GCTGAGTAGACGTTTGGTTCAAG 59.815 47.826 0.00 0.00 0.00 3.02
6445 7438 2.750948 TGCTGAGTAGACGTTTGGTTC 58.249 47.619 0.00 0.00 0.00 3.62
6447 7440 2.902705 TTGCTGAGTAGACGTTTGGT 57.097 45.000 0.00 0.00 0.00 3.67
6448 7441 4.749245 ATTTTGCTGAGTAGACGTTTGG 57.251 40.909 0.00 0.00 0.00 3.28
6451 7444 4.385825 TGGAATTTTGCTGAGTAGACGTT 58.614 39.130 0.00 0.00 0.00 3.99
6453 7446 3.997021 ACTGGAATTTTGCTGAGTAGACG 59.003 43.478 0.00 0.00 0.00 4.18
6454 7447 4.997395 TCACTGGAATTTTGCTGAGTAGAC 59.003 41.667 0.00 0.00 0.00 2.59
6455 7448 5.227569 TCACTGGAATTTTGCTGAGTAGA 57.772 39.130 0.00 0.00 0.00 2.59
6457 7450 6.003326 TCAATCACTGGAATTTTGCTGAGTA 58.997 36.000 0.00 0.00 0.00 2.59
6458 7451 4.828939 TCAATCACTGGAATTTTGCTGAGT 59.171 37.500 0.00 0.00 0.00 3.41
6461 7454 6.160684 TGAATCAATCACTGGAATTTTGCTG 58.839 36.000 0.00 0.00 31.50 4.41
6462 7455 6.209986 TCTGAATCAATCACTGGAATTTTGCT 59.790 34.615 0.00 0.00 33.47 3.91
6465 7458 9.485206 CTTTTCTGAATCAATCACTGGAATTTT 57.515 29.630 0.00 0.00 33.47 1.82
6466 7459 8.863086 TCTTTTCTGAATCAATCACTGGAATTT 58.137 29.630 0.00 0.00 33.47 1.82
6467 7460 8.413309 TCTTTTCTGAATCAATCACTGGAATT 57.587 30.769 0.00 0.00 33.47 2.17
6468 7461 8.413309 TTCTTTTCTGAATCAATCACTGGAAT 57.587 30.769 0.00 0.00 33.47 3.01
6471 7464 6.585322 GCTTTCTTTTCTGAATCAATCACTGG 59.415 38.462 0.00 0.00 33.47 4.00
6472 7465 7.143340 TGCTTTCTTTTCTGAATCAATCACTG 58.857 34.615 0.00 0.00 33.47 3.66
6473 7466 7.281040 TGCTTTCTTTTCTGAATCAATCACT 57.719 32.000 0.00 0.00 33.47 3.41
6474 7467 8.530269 AATGCTTTCTTTTCTGAATCAATCAC 57.470 30.769 0.00 0.00 33.47 3.06
6481 7474 9.836864 AACCTTTTAATGCTTTCTTTTCTGAAT 57.163 25.926 0.00 0.00 0.00 2.57
6482 7475 9.665719 AAACCTTTTAATGCTTTCTTTTCTGAA 57.334 25.926 0.00 0.00 0.00 3.02
6483 7476 9.665719 AAAACCTTTTAATGCTTTCTTTTCTGA 57.334 25.926 0.00 0.00 0.00 3.27
6484 7477 9.706846 CAAAACCTTTTAATGCTTTCTTTTCTG 57.293 29.630 0.00 0.00 0.00 3.02
6485 7478 8.892723 CCAAAACCTTTTAATGCTTTCTTTTCT 58.107 29.630 0.00 0.00 0.00 2.52
6486 7479 7.643764 GCCAAAACCTTTTAATGCTTTCTTTTC 59.356 33.333 0.00 0.00 0.00 2.29
6487 7480 7.416213 GGCCAAAACCTTTTAATGCTTTCTTTT 60.416 33.333 0.00 0.00 0.00 2.27
6488 7481 6.039270 GGCCAAAACCTTTTAATGCTTTCTTT 59.961 34.615 0.00 0.00 0.00 2.52
6489 7482 5.530915 GGCCAAAACCTTTTAATGCTTTCTT 59.469 36.000 0.00 0.00 0.00 2.52
6490 7483 5.063204 GGCCAAAACCTTTTAATGCTTTCT 58.937 37.500 0.00 0.00 0.00 2.52
6492 7485 4.786425 TGGCCAAAACCTTTTAATGCTTT 58.214 34.783 0.61 0.00 0.00 3.51
6494 7487 4.388485 CTTGGCCAAAACCTTTTAATGCT 58.612 39.130 20.91 0.00 0.00 3.79
6495 7488 3.058293 GCTTGGCCAAAACCTTTTAATGC 60.058 43.478 20.91 10.82 0.00 3.56
6496 7489 3.186205 CGCTTGGCCAAAACCTTTTAATG 59.814 43.478 20.91 4.04 0.00 1.90
6497 7490 3.181459 ACGCTTGGCCAAAACCTTTTAAT 60.181 39.130 20.91 0.00 0.00 1.40
6498 7491 2.168728 ACGCTTGGCCAAAACCTTTTAA 59.831 40.909 20.91 0.00 0.00 1.52
6499 7492 1.757699 ACGCTTGGCCAAAACCTTTTA 59.242 42.857 20.91 0.00 0.00 1.52
6501 7494 0.104120 GACGCTTGGCCAAAACCTTT 59.896 50.000 20.91 0.28 0.00 3.11
6502 7495 1.739667 GACGCTTGGCCAAAACCTT 59.260 52.632 20.91 4.41 0.00 3.50
6503 7496 2.551912 CGACGCTTGGCCAAAACCT 61.552 57.895 20.91 4.52 0.00 3.50
6504 7497 2.050442 CGACGCTTGGCCAAAACC 60.050 61.111 20.91 9.84 0.00 3.27
6505 7498 2.050442 CCGACGCTTGGCCAAAAC 60.050 61.111 20.91 13.67 0.00 2.43
6513 7506 4.717629 TGAGGTCGCCGACGCTTG 62.718 66.667 11.60 0.00 39.84 4.01
6514 7507 4.421479 CTGAGGTCGCCGACGCTT 62.421 66.667 11.60 0.00 39.84 4.68
6517 7510 3.384014 GAGTCTGAGGTCGCCGACG 62.384 68.421 11.60 0.00 42.01 5.12
6518 7511 1.863662 TTGAGTCTGAGGTCGCCGAC 61.864 60.000 9.15 9.15 0.00 4.79
6519 7512 1.176619 TTTGAGTCTGAGGTCGCCGA 61.177 55.000 0.00 0.00 0.00 5.54
6521 7514 1.646189 GATTTGAGTCTGAGGTCGCC 58.354 55.000 0.00 0.00 0.00 5.54
6522 7515 1.272781 CGATTTGAGTCTGAGGTCGC 58.727 55.000 0.00 0.00 0.00 5.19
6523 7516 1.272781 GCGATTTGAGTCTGAGGTCG 58.727 55.000 0.00 0.00 0.00 4.79
6525 7518 1.066573 CCTGCGATTTGAGTCTGAGGT 60.067 52.381 0.00 0.00 0.00 3.85
6527 7520 2.662006 TCCTGCGATTTGAGTCTGAG 57.338 50.000 0.00 0.00 0.00 3.35
6530 7523 2.421424 GCAATTCCTGCGATTTGAGTCT 59.579 45.455 0.00 0.00 42.37 3.24
6531 7524 2.790387 GCAATTCCTGCGATTTGAGTC 58.210 47.619 0.00 0.00 42.37 3.36
6532 7525 2.927553 GCAATTCCTGCGATTTGAGT 57.072 45.000 0.00 0.00 42.37 3.41
6543 7536 2.288640 GCAAACTGAGCTTGCAATTCCT 60.289 45.455 15.06 0.00 46.78 3.36
6550 7543 1.081840 GACGGCAAACTGAGCTTGC 60.082 57.895 11.88 11.88 46.82 4.01
6551 7544 1.576421 GGACGGCAAACTGAGCTTG 59.424 57.895 0.00 0.00 0.00 4.01
6552 7545 1.961277 CGGACGGCAAACTGAGCTT 60.961 57.895 0.00 0.00 0.00 3.74
6553 7546 2.357517 CGGACGGCAAACTGAGCT 60.358 61.111 0.00 0.00 0.00 4.09
6554 7547 2.171489 GAACGGACGGCAAACTGAGC 62.171 60.000 0.00 0.00 0.00 4.26
6555 7548 1.566018 GGAACGGACGGCAAACTGAG 61.566 60.000 0.00 0.00 0.00 3.35
6556 7549 1.595929 GGAACGGACGGCAAACTGA 60.596 57.895 0.00 0.00 0.00 3.41
6557 7550 1.440938 TTGGAACGGACGGCAAACTG 61.441 55.000 0.00 0.00 0.00 3.16
6558 7551 0.748729 TTTGGAACGGACGGCAAACT 60.749 50.000 0.00 0.00 0.00 2.66
6560 7553 0.748729 ACTTTGGAACGGACGGCAAA 60.749 50.000 0.00 0.00 0.00 3.68
6562 7555 0.748729 AAACTTTGGAACGGACGGCA 60.749 50.000 0.00 0.00 0.00 5.69
6563 7556 0.382873 AAAACTTTGGAACGGACGGC 59.617 50.000 0.00 0.00 0.00 5.68
6564 7557 2.855660 AAAAACTTTGGAACGGACGG 57.144 45.000 0.00 0.00 0.00 4.79
6598 7591 1.885887 CTTGGAACGGCCTTCATCAAA 59.114 47.619 14.39 1.72 37.63 2.69
6599 7592 1.533625 CTTGGAACGGCCTTCATCAA 58.466 50.000 14.39 10.07 37.63 2.57
6600 7593 0.322456 CCTTGGAACGGCCTTCATCA 60.322 55.000 14.39 4.36 37.63 3.07
6602 7595 0.404040 TTCCTTGGAACGGCCTTCAT 59.596 50.000 14.39 0.00 37.63 2.57
6604 7597 1.545841 ATTTCCTTGGAACGGCCTTC 58.454 50.000 0.00 3.66 37.63 3.46
6605 7598 1.618343 CAATTTCCTTGGAACGGCCTT 59.382 47.619 0.00 0.00 37.63 4.35
6606 7599 1.203001 TCAATTTCCTTGGAACGGCCT 60.203 47.619 0.00 0.00 37.63 5.19
6607 7600 1.202348 CTCAATTTCCTTGGAACGGCC 59.798 52.381 0.98 0.00 35.43 6.13
6608 7601 1.886542 ACTCAATTTCCTTGGAACGGC 59.113 47.619 0.98 0.00 35.43 5.68
6609 7602 3.305335 CCAACTCAATTTCCTTGGAACGG 60.305 47.826 0.98 0.00 36.06 4.44
6610 7603 3.305335 CCCAACTCAATTTCCTTGGAACG 60.305 47.826 0.98 0.00 36.06 3.95
6611 7604 3.554960 GCCCAACTCAATTTCCTTGGAAC 60.555 47.826 0.98 0.00 36.06 3.62
6612 7605 2.632512 GCCCAACTCAATTTCCTTGGAA 59.367 45.455 0.00 0.00 36.06 3.53
6613 7606 2.247358 GCCCAACTCAATTTCCTTGGA 58.753 47.619 6.41 0.00 36.06 3.53
6614 7607 1.276138 GGCCCAACTCAATTTCCTTGG 59.724 52.381 0.00 0.00 35.43 3.61
6615 7608 1.969923 TGGCCCAACTCAATTTCCTTG 59.030 47.619 0.00 0.00 36.09 3.61
6616 7609 2.397044 TGGCCCAACTCAATTTCCTT 57.603 45.000 0.00 0.00 0.00 3.36
6617 7610 2.397044 TTGGCCCAACTCAATTTCCT 57.603 45.000 0.00 0.00 0.00 3.36
6618 7611 3.483808 TTTTGGCCCAACTCAATTTCC 57.516 42.857 0.00 0.00 0.00 3.13
6619 7612 4.213906 CACATTTTGGCCCAACTCAATTTC 59.786 41.667 0.00 0.00 0.00 2.17
6620 7613 4.136051 CACATTTTGGCCCAACTCAATTT 58.864 39.130 0.00 0.00 0.00 1.82
6621 7614 3.390639 TCACATTTTGGCCCAACTCAATT 59.609 39.130 0.00 0.00 0.00 2.32
6622 7615 2.971330 TCACATTTTGGCCCAACTCAAT 59.029 40.909 0.00 0.00 0.00 2.57
6623 7616 2.392662 TCACATTTTGGCCCAACTCAA 58.607 42.857 0.00 0.00 0.00 3.02
6624 7617 2.079170 TCACATTTTGGCCCAACTCA 57.921 45.000 0.00 0.00 0.00 3.41
6625 7618 4.402155 TCATATCACATTTTGGCCCAACTC 59.598 41.667 0.00 0.00 0.00 3.01
6626 7619 4.352009 TCATATCACATTTTGGCCCAACT 58.648 39.130 0.00 0.00 0.00 3.16
6627 7620 4.734398 TCATATCACATTTTGGCCCAAC 57.266 40.909 0.00 0.00 0.00 3.77
6628 7621 7.429374 TTTATCATATCACATTTTGGCCCAA 57.571 32.000 0.00 0.00 0.00 4.12
6629 7622 7.344093 TCTTTTATCATATCACATTTTGGCCCA 59.656 33.333 0.00 0.00 0.00 5.36
6630 7623 7.725251 TCTTTTATCATATCACATTTTGGCCC 58.275 34.615 0.00 0.00 0.00 5.80
6631 7624 9.598517 TTTCTTTTATCATATCACATTTTGGCC 57.401 29.630 0.00 0.00 0.00 5.36
6638 7631 8.345565 GCCGTCTTTTCTTTTATCATATCACAT 58.654 33.333 0.00 0.00 0.00 3.21
6639 7632 7.335673 TGCCGTCTTTTCTTTTATCATATCACA 59.664 33.333 0.00 0.00 0.00 3.58
6640 7633 7.693952 TGCCGTCTTTTCTTTTATCATATCAC 58.306 34.615 0.00 0.00 0.00 3.06
6641 7634 7.857734 TGCCGTCTTTTCTTTTATCATATCA 57.142 32.000 0.00 0.00 0.00 2.15
6642 7635 9.736023 AAATGCCGTCTTTTCTTTTATCATATC 57.264 29.630 0.00 0.00 0.00 1.63
6643 7636 9.736023 GAAATGCCGTCTTTTCTTTTATCATAT 57.264 29.630 0.00 0.00 35.01 1.78
6644 7637 8.188139 GGAAATGCCGTCTTTTCTTTTATCATA 58.812 33.333 5.04 0.00 36.88 2.15
6645 7638 7.035612 GGAAATGCCGTCTTTTCTTTTATCAT 58.964 34.615 5.04 0.00 36.88 2.45
6646 7639 6.015856 TGGAAATGCCGTCTTTTCTTTTATCA 60.016 34.615 5.04 0.00 40.66 2.15
6647 7640 6.386654 TGGAAATGCCGTCTTTTCTTTTATC 58.613 36.000 5.04 0.00 40.66 1.75
6648 7641 6.339587 TGGAAATGCCGTCTTTTCTTTTAT 57.660 33.333 5.04 0.00 40.66 1.40
6649 7642 5.776173 TGGAAATGCCGTCTTTTCTTTTA 57.224 34.783 5.04 0.00 40.66 1.52
6650 7643 4.664150 TGGAAATGCCGTCTTTTCTTTT 57.336 36.364 5.04 0.00 40.66 2.27
6651 7644 4.871933 ATGGAAATGCCGTCTTTTCTTT 57.128 36.364 5.04 0.00 40.66 2.52
6660 7653 1.202639 TGATAGCGATGGAAATGCCGT 60.203 47.619 0.00 0.00 40.66 5.68
6661 7654 1.195448 GTGATAGCGATGGAAATGCCG 59.805 52.381 0.00 0.00 40.66 5.69
6662 7655 2.225019 CAGTGATAGCGATGGAAATGCC 59.775 50.000 0.00 0.00 37.10 4.40
6663 7656 2.350197 GCAGTGATAGCGATGGAAATGC 60.350 50.000 0.00 0.00 0.00 3.56
6664 7657 2.874086 TGCAGTGATAGCGATGGAAATG 59.126 45.455 0.00 0.00 33.85 2.32
6665 7658 3.198409 TGCAGTGATAGCGATGGAAAT 57.802 42.857 0.00 0.00 33.85 2.17
6666 7659 2.689553 TGCAGTGATAGCGATGGAAA 57.310 45.000 0.00 0.00 33.85 3.13
6667 7660 2.554142 CTTGCAGTGATAGCGATGGAA 58.446 47.619 0.00 0.00 33.85 3.53
6668 7661 1.202568 CCTTGCAGTGATAGCGATGGA 60.203 52.381 0.00 0.00 33.85 3.41
6669 7662 1.202568 TCCTTGCAGTGATAGCGATGG 60.203 52.381 0.00 0.00 33.85 3.51
6670 7663 2.133553 CTCCTTGCAGTGATAGCGATG 58.866 52.381 0.00 0.00 33.85 3.84
6671 7664 1.539929 GCTCCTTGCAGTGATAGCGAT 60.540 52.381 0.00 0.00 42.31 4.58
6672 7665 0.179100 GCTCCTTGCAGTGATAGCGA 60.179 55.000 0.00 0.00 42.31 4.93
6673 7666 1.156645 GGCTCCTTGCAGTGATAGCG 61.157 60.000 0.00 0.00 45.15 4.26
6674 7667 0.817229 GGGCTCCTTGCAGTGATAGC 60.817 60.000 0.00 0.00 45.15 2.97
6675 7668 0.531532 CGGGCTCCTTGCAGTGATAG 60.532 60.000 0.00 0.00 45.15 2.08
6676 7669 1.264749 ACGGGCTCCTTGCAGTGATA 61.265 55.000 0.00 0.00 45.15 2.15
6677 7670 2.129555 AACGGGCTCCTTGCAGTGAT 62.130 55.000 0.00 0.00 45.15 3.06
6678 7671 2.337879 AAACGGGCTCCTTGCAGTGA 62.338 55.000 0.00 0.00 45.15 3.41
6679 7672 1.856265 GAAACGGGCTCCTTGCAGTG 61.856 60.000 0.00 0.00 45.15 3.66
6680 7673 1.600916 GAAACGGGCTCCTTGCAGT 60.601 57.895 0.00 0.00 45.15 4.40
6681 7674 2.335712 GGAAACGGGCTCCTTGCAG 61.336 63.158 0.00 0.00 45.15 4.41
6682 7675 2.282180 GGAAACGGGCTCCTTGCA 60.282 61.111 0.00 0.00 45.15 4.08
6683 7676 2.034221 AGGAAACGGGCTCCTTGC 59.966 61.111 0.00 0.00 40.61 4.01
6684 7677 0.035056 ATGAGGAAACGGGCTCCTTG 60.035 55.000 3.99 0.00 43.65 3.61
6685 7678 0.253327 GATGAGGAAACGGGCTCCTT 59.747 55.000 3.99 0.00 43.65 3.36
6686 7679 1.908483 GATGAGGAAACGGGCTCCT 59.092 57.895 2.17 2.17 46.40 3.69
6687 7680 1.521681 CGATGAGGAAACGGGCTCC 60.522 63.158 0.00 0.00 0.00 4.70
6688 7681 1.084370 CACGATGAGGAAACGGGCTC 61.084 60.000 0.00 0.00 0.00 4.70
6689 7682 1.079127 CACGATGAGGAAACGGGCT 60.079 57.895 0.00 0.00 0.00 5.19
6690 7683 2.106683 CCACGATGAGGAAACGGGC 61.107 63.158 0.00 0.00 0.00 6.13
6691 7684 2.106683 GCCACGATGAGGAAACGGG 61.107 63.158 0.00 0.00 0.00 5.28
6692 7685 2.452813 CGCCACGATGAGGAAACGG 61.453 63.158 0.00 0.00 0.00 4.44
6693 7686 1.683790 GACGCCACGATGAGGAAACG 61.684 60.000 0.00 0.00 0.00 3.60
6694 7687 1.359459 GGACGCCACGATGAGGAAAC 61.359 60.000 0.00 0.00 0.00 2.78
6695 7688 1.079405 GGACGCCACGATGAGGAAA 60.079 57.895 0.00 0.00 0.00 3.13
6696 7689 2.577059 GGACGCCACGATGAGGAA 59.423 61.111 0.00 0.00 0.00 3.36
6697 7690 3.822192 CGGACGCCACGATGAGGA 61.822 66.667 0.00 0.00 0.00 3.71
6761 7754 1.379443 ACGAGGCCTACCGATGACA 60.379 57.895 19.78 0.00 42.76 3.58
6770 7763 2.122989 GGATGGGGACGAGGCCTA 60.123 66.667 4.42 0.00 0.00 3.93
6773 7766 3.399181 TGTGGATGGGGACGAGGC 61.399 66.667 0.00 0.00 0.00 4.70
6774 7767 2.584608 GTGTGGATGGGGACGAGG 59.415 66.667 0.00 0.00 0.00 4.63
6809 7802 4.459089 GCAGGCAGGGTCGGTCTC 62.459 72.222 0.00 0.00 0.00 3.36
6815 7808 4.729918 CACCTGGCAGGCAGGGTC 62.730 72.222 38.80 3.16 43.89 4.46
6939 7940 2.513026 GATGAGCGGATGGGATCGGG 62.513 65.000 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.