Multiple sequence alignment - TraesCS5A01G416000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G416000 chr5A 100.000 1290 0 0 930 2219 605098709 605097420 0.000000e+00 2383.0
1 TraesCS5A01G416000 chr5A 100.000 694 0 0 1 694 605099638 605098945 0.000000e+00 1282.0
2 TraesCS5A01G416000 chr5A 92.135 89 7 0 3 91 461629016 461628928 2.310000e-25 126.0
3 TraesCS5A01G416000 chr5D 90.148 812 43 14 931 1727 483643646 483642857 0.000000e+00 1022.0
4 TraesCS5A01G416000 chr5D 90.196 204 7 7 2025 2217 483642557 483642356 1.020000e-63 254.0
5 TraesCS5A01G416000 chr5D 88.679 106 8 1 3 108 163793589 163793488 2.310000e-25 126.0
6 TraesCS5A01G416000 chr5B 85.332 859 60 37 979 1805 594735559 594734735 0.000000e+00 828.0
7 TraesCS5A01G416000 chr5B 88.400 250 14 5 1979 2217 594734410 594734165 1.000000e-73 287.0
8 TraesCS5A01G416000 chr5B 87.302 189 12 5 495 680 594736432 594736253 2.890000e-49 206.0
9 TraesCS5A01G416000 chr7A 90.099 101 9 1 3 102 612974315 612974215 1.790000e-26 130.0
10 TraesCS5A01G416000 chr7A 87.850 107 11 2 3 109 483486197 483486301 8.320000e-25 124.0
11 TraesCS5A01G416000 chr2D 88.679 106 10 2 3 108 82652758 82652861 6.430000e-26 128.0
12 TraesCS5A01G416000 chr1D 88.785 107 9 3 3 108 130669999 130670103 6.430000e-26 128.0
13 TraesCS5A01G416000 chr1D 96.875 32 1 0 463 494 69615670 69615701 1.000000e-03 54.7
14 TraesCS5A01G416000 chr7D 88.679 106 9 3 3 108 37120406 37120304 2.310000e-25 126.0
15 TraesCS5A01G416000 chr7D 93.023 43 2 1 119 160 147692267 147692309 6.620000e-06 62.1
16 TraesCS5A01G416000 chr3A 87.736 106 9 1 3 108 505539233 505539132 1.080000e-23 121.0
17 TraesCS5A01G416000 chr3A 88.776 98 11 0 2 99 595440064 595440161 1.080000e-23 121.0
18 TraesCS5A01G416000 chr3A 95.556 45 0 2 114 157 158688653 158688610 1.100000e-08 71.3
19 TraesCS5A01G416000 chr4A 100.000 36 0 0 114 149 423375220 423375185 1.420000e-07 67.6
20 TraesCS5A01G416000 chr7B 94.444 36 2 0 458 493 680916597 680916632 3.080000e-04 56.5
21 TraesCS5A01G416000 chr2B 100.000 30 0 0 463 492 416209824 416209795 3.080000e-04 56.5
22 TraesCS5A01G416000 chr2B 90.244 41 3 1 463 503 799066644 799066683 4.000000e-03 52.8
23 TraesCS5A01G416000 chrUn 96.875 32 1 0 463 494 37384473 37384504 1.000000e-03 54.7
24 TraesCS5A01G416000 chr6A 100.000 29 0 0 120 148 571190031 571190059 1.000000e-03 54.7
25 TraesCS5A01G416000 chr4B 100.000 29 0 0 466 494 466966659 466966631 1.000000e-03 54.7
26 TraesCS5A01G416000 chr4B 100.000 29 0 0 466 494 538963201 538963173 1.000000e-03 54.7
27 TraesCS5A01G416000 chr1A 100.000 29 0 0 466 494 299072369 299072341 1.000000e-03 54.7
28 TraesCS5A01G416000 chr3B 90.244 41 3 1 463 502 380873256 380873296 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G416000 chr5A 605097420 605099638 2218 True 1832.500000 2383 100.000000 1 2219 2 chr5A.!!$R2 2218
1 TraesCS5A01G416000 chr5D 483642356 483643646 1290 True 638.000000 1022 90.172000 931 2217 2 chr5D.!!$R2 1286
2 TraesCS5A01G416000 chr5B 594734165 594736432 2267 True 440.333333 828 87.011333 495 2217 3 chr5B.!!$R1 1722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
205 206 0.106419 TTTCCGGTCTTTGGCTTGGT 60.106 50.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1472 1949 0.109873 CGCAAGCCTGAGAAAGCAAG 60.11 55.0 0.0 0.0 0.0 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.622514 AGATCAGGTCTCACGGGC 58.377 61.111 0.00 0.00 28.45 6.13
27 28 1.000993 AGATCAGGTCTCACGGGCT 59.999 57.895 0.00 0.00 28.45 5.19
28 29 0.259065 AGATCAGGTCTCACGGGCTA 59.741 55.000 0.00 0.00 28.45 3.93
29 30 0.671251 GATCAGGTCTCACGGGCTAG 59.329 60.000 0.00 0.00 0.00 3.42
30 31 1.395826 ATCAGGTCTCACGGGCTAGC 61.396 60.000 6.04 6.04 0.00 3.42
31 32 2.037367 AGGTCTCACGGGCTAGCA 59.963 61.111 18.24 0.00 0.00 3.49
32 33 2.055042 AGGTCTCACGGGCTAGCAG 61.055 63.158 18.24 12.40 0.00 4.24
33 34 2.496817 GTCTCACGGGCTAGCAGG 59.503 66.667 18.24 9.92 0.00 4.85
34 35 2.037367 TCTCACGGGCTAGCAGGT 59.963 61.111 18.24 10.63 0.00 4.00
35 36 2.185350 CTCACGGGCTAGCAGGTG 59.815 66.667 23.85 23.85 0.00 4.00
36 37 2.283604 TCACGGGCTAGCAGGTGA 60.284 61.111 26.72 26.72 37.09 4.02
37 38 2.185350 CACGGGCTAGCAGGTGAG 59.815 66.667 24.96 9.39 32.23 3.51
38 39 3.077556 ACGGGCTAGCAGGTGAGG 61.078 66.667 18.24 0.00 0.00 3.86
39 40 4.537433 CGGGCTAGCAGGTGAGGC 62.537 72.222 18.24 0.00 37.52 4.70
41 42 4.182433 GGCTAGCAGGTGAGGCCC 62.182 72.222 18.24 0.00 38.26 5.80
42 43 3.402681 GCTAGCAGGTGAGGCCCA 61.403 66.667 10.63 0.00 38.26 5.36
43 44 2.750657 GCTAGCAGGTGAGGCCCAT 61.751 63.158 10.63 0.00 38.26 4.00
44 45 1.147824 CTAGCAGGTGAGGCCCATG 59.852 63.158 0.00 0.00 38.26 3.66
45 46 2.955022 CTAGCAGGTGAGGCCCATGC 62.955 65.000 8.82 8.82 38.26 4.06
46 47 4.437587 GCAGGTGAGGCCCATGCT 62.438 66.667 9.50 0.00 38.26 3.79
47 48 2.439701 CAGGTGAGGCCCATGCTG 60.440 66.667 0.00 0.00 38.26 4.41
48 49 2.611800 AGGTGAGGCCCATGCTGA 60.612 61.111 0.00 0.00 38.26 4.26
49 50 2.005266 AGGTGAGGCCCATGCTGAT 61.005 57.895 0.00 0.00 38.26 2.90
50 51 0.695462 AGGTGAGGCCCATGCTGATA 60.695 55.000 0.00 0.00 38.26 2.15
51 52 0.250640 GGTGAGGCCCATGCTGATAG 60.251 60.000 0.00 0.00 37.74 2.08
52 53 0.761187 GTGAGGCCCATGCTGATAGA 59.239 55.000 0.00 0.00 37.74 1.98
53 54 1.350351 GTGAGGCCCATGCTGATAGAT 59.650 52.381 0.00 0.00 37.74 1.98
54 55 1.350019 TGAGGCCCATGCTGATAGATG 59.650 52.381 0.00 0.00 37.74 2.90
55 56 1.627329 GAGGCCCATGCTGATAGATGA 59.373 52.381 0.00 0.00 37.74 2.92
56 57 2.239150 GAGGCCCATGCTGATAGATGAT 59.761 50.000 0.00 0.00 37.74 2.45
57 58 3.453717 GAGGCCCATGCTGATAGATGATA 59.546 47.826 0.00 0.00 37.74 2.15
58 59 4.045736 AGGCCCATGCTGATAGATGATAT 58.954 43.478 0.00 0.00 37.74 1.63
59 60 4.135306 GGCCCATGCTGATAGATGATATG 58.865 47.826 0.00 0.00 37.74 1.78
60 61 4.384978 GGCCCATGCTGATAGATGATATGT 60.385 45.833 0.00 0.00 37.74 2.29
61 62 4.575236 GCCCATGCTGATAGATGATATGTG 59.425 45.833 0.00 0.00 33.53 3.21
62 63 5.628433 GCCCATGCTGATAGATGATATGTGA 60.628 44.000 0.00 0.00 33.53 3.58
63 64 5.816258 CCCATGCTGATAGATGATATGTGAC 59.184 44.000 0.00 0.00 0.00 3.67
64 65 6.403878 CCATGCTGATAGATGATATGTGACA 58.596 40.000 0.00 0.00 0.00 3.58
65 66 7.048512 CCATGCTGATAGATGATATGTGACAT 58.951 38.462 2.65 2.65 0.00 3.06
66 67 7.553044 CCATGCTGATAGATGATATGTGACATT 59.447 37.037 2.29 0.00 0.00 2.71
67 68 8.604890 CATGCTGATAGATGATATGTGACATTC 58.395 37.037 2.29 2.27 0.00 2.67
68 69 7.673180 TGCTGATAGATGATATGTGACATTCA 58.327 34.615 2.29 8.03 0.00 2.57
84 85 8.112099 GTGACATTCACAAATCATAAAGCATC 57.888 34.615 1.34 0.00 46.22 3.91
85 86 7.972277 GTGACATTCACAAATCATAAAGCATCT 59.028 33.333 1.34 0.00 46.22 2.90
86 87 9.176460 TGACATTCACAAATCATAAAGCATCTA 57.824 29.630 0.00 0.00 0.00 1.98
93 94 9.674824 CACAAATCATAAAGCATCTAATCTTCC 57.325 33.333 0.00 0.00 0.00 3.46
94 95 8.854117 ACAAATCATAAAGCATCTAATCTTCCC 58.146 33.333 0.00 0.00 0.00 3.97
95 96 8.302438 CAAATCATAAAGCATCTAATCTTCCCC 58.698 37.037 0.00 0.00 0.00 4.81
96 97 6.770286 TCATAAAGCATCTAATCTTCCCCT 57.230 37.500 0.00 0.00 0.00 4.79
97 98 6.773638 TCATAAAGCATCTAATCTTCCCCTC 58.226 40.000 0.00 0.00 0.00 4.30
98 99 4.445557 AAAGCATCTAATCTTCCCCTCC 57.554 45.455 0.00 0.00 0.00 4.30
99 100 2.343625 AGCATCTAATCTTCCCCTCCC 58.656 52.381 0.00 0.00 0.00 4.30
100 101 1.352687 GCATCTAATCTTCCCCTCCCC 59.647 57.143 0.00 0.00 0.00 4.81
101 102 1.988846 CATCTAATCTTCCCCTCCCCC 59.011 57.143 0.00 0.00 0.00 5.40
102 103 1.340502 TCTAATCTTCCCCTCCCCCT 58.659 55.000 0.00 0.00 0.00 4.79
103 104 1.061346 TCTAATCTTCCCCTCCCCCTG 60.061 57.143 0.00 0.00 0.00 4.45
104 105 1.031939 TAATCTTCCCCTCCCCCTGA 58.968 55.000 0.00 0.00 0.00 3.86
105 106 0.351998 AATCTTCCCCTCCCCCTGAT 59.648 55.000 0.00 0.00 0.00 2.90
106 107 0.351998 ATCTTCCCCTCCCCCTGATT 59.648 55.000 0.00 0.00 0.00 2.57
107 108 0.123266 TCTTCCCCTCCCCCTGATTT 59.877 55.000 0.00 0.00 0.00 2.17
108 109 1.010795 CTTCCCCTCCCCCTGATTTT 58.989 55.000 0.00 0.00 0.00 1.82
109 110 1.007607 TTCCCCTCCCCCTGATTTTC 58.992 55.000 0.00 0.00 0.00 2.29
110 111 0.123266 TCCCCTCCCCCTGATTTTCT 59.877 55.000 0.00 0.00 0.00 2.52
111 112 1.371774 TCCCCTCCCCCTGATTTTCTA 59.628 52.381 0.00 0.00 0.00 2.10
112 113 2.214201 CCCCTCCCCCTGATTTTCTAA 58.786 52.381 0.00 0.00 0.00 2.10
113 114 2.091830 CCCCTCCCCCTGATTTTCTAAC 60.092 54.545 0.00 0.00 0.00 2.34
114 115 2.853077 CCCTCCCCCTGATTTTCTAACT 59.147 50.000 0.00 0.00 0.00 2.24
115 116 4.045022 CCCTCCCCCTGATTTTCTAACTA 58.955 47.826 0.00 0.00 0.00 2.24
116 117 4.103311 CCCTCCCCCTGATTTTCTAACTAG 59.897 50.000 0.00 0.00 0.00 2.57
117 118 4.445019 CCTCCCCCTGATTTTCTAACTAGC 60.445 50.000 0.00 0.00 0.00 3.42
118 119 3.458487 TCCCCCTGATTTTCTAACTAGCC 59.542 47.826 0.00 0.00 0.00 3.93
119 120 3.435169 CCCCCTGATTTTCTAACTAGCCC 60.435 52.174 0.00 0.00 0.00 5.19
120 121 3.467803 CCCTGATTTTCTAACTAGCCCG 58.532 50.000 0.00 0.00 0.00 6.13
121 122 3.118371 CCCTGATTTTCTAACTAGCCCGT 60.118 47.826 0.00 0.00 0.00 5.28
122 123 3.871594 CCTGATTTTCTAACTAGCCCGTG 59.128 47.826 0.00 0.00 0.00 4.94
123 124 4.382685 CCTGATTTTCTAACTAGCCCGTGA 60.383 45.833 0.00 0.00 0.00 4.35
124 125 4.755411 TGATTTTCTAACTAGCCCGTGAG 58.245 43.478 0.00 0.00 0.00 3.51
125 126 4.464951 TGATTTTCTAACTAGCCCGTGAGA 59.535 41.667 0.00 0.00 0.00 3.27
126 127 3.863142 TTTCTAACTAGCCCGTGAGAC 57.137 47.619 0.00 0.00 0.00 3.36
127 128 1.760192 TCTAACTAGCCCGTGAGACC 58.240 55.000 0.00 0.00 0.00 3.85
128 129 1.284198 TCTAACTAGCCCGTGAGACCT 59.716 52.381 0.00 0.00 0.00 3.85
129 130 2.507058 TCTAACTAGCCCGTGAGACCTA 59.493 50.000 0.00 0.00 0.00 3.08
130 131 1.765230 AACTAGCCCGTGAGACCTAG 58.235 55.000 0.00 0.00 37.51 3.02
131 132 0.624785 ACTAGCCCGTGAGACCTAGT 59.375 55.000 0.00 0.00 38.82 2.57
132 133 1.310904 CTAGCCCGTGAGACCTAGTC 58.689 60.000 0.00 0.00 31.41 2.59
133 134 0.917533 TAGCCCGTGAGACCTAGTCT 59.082 55.000 0.00 0.00 46.42 3.24
164 165 8.705048 AATTCTTTTCCTCAGATACTCGTTAC 57.295 34.615 0.00 0.00 0.00 2.50
165 166 6.205101 TCTTTTCCTCAGATACTCGTTACC 57.795 41.667 0.00 0.00 0.00 2.85
166 167 4.627611 TTTCCTCAGATACTCGTTACCG 57.372 45.455 0.00 0.00 0.00 4.02
167 168 1.945394 TCCTCAGATACTCGTTACCGC 59.055 52.381 0.00 0.00 0.00 5.68
168 169 1.001597 CCTCAGATACTCGTTACCGCC 60.002 57.143 0.00 0.00 0.00 6.13
169 170 1.948145 CTCAGATACTCGTTACCGCCT 59.052 52.381 0.00 0.00 0.00 5.52
170 171 2.358267 CTCAGATACTCGTTACCGCCTT 59.642 50.000 0.00 0.00 0.00 4.35
171 172 2.098607 TCAGATACTCGTTACCGCCTTG 59.901 50.000 0.00 0.00 0.00 3.61
172 173 2.097825 AGATACTCGTTACCGCCTTGT 58.902 47.619 0.00 0.00 0.00 3.16
173 174 2.098770 AGATACTCGTTACCGCCTTGTC 59.901 50.000 0.00 0.00 0.00 3.18
174 175 1.538047 TACTCGTTACCGCCTTGTCT 58.462 50.000 0.00 0.00 0.00 3.41
175 176 0.677842 ACTCGTTACCGCCTTGTCTT 59.322 50.000 0.00 0.00 0.00 3.01
176 177 1.068474 CTCGTTACCGCCTTGTCTTG 58.932 55.000 0.00 0.00 0.00 3.02
177 178 0.947180 TCGTTACCGCCTTGTCTTGC 60.947 55.000 0.00 0.00 0.00 4.01
178 179 1.873863 GTTACCGCCTTGTCTTGCC 59.126 57.895 0.00 0.00 0.00 4.52
179 180 0.605589 GTTACCGCCTTGTCTTGCCT 60.606 55.000 0.00 0.00 0.00 4.75
180 181 0.321298 TTACCGCCTTGTCTTGCCTC 60.321 55.000 0.00 0.00 0.00 4.70
181 182 2.180159 TACCGCCTTGTCTTGCCTCC 62.180 60.000 0.00 0.00 0.00 4.30
182 183 3.121030 CGCCTTGTCTTGCCTCCG 61.121 66.667 0.00 0.00 0.00 4.63
183 184 3.435186 GCCTTGTCTTGCCTCCGC 61.435 66.667 0.00 0.00 0.00 5.54
184 185 2.348998 CCTTGTCTTGCCTCCGCT 59.651 61.111 0.00 0.00 35.36 5.52
185 186 1.596934 CCTTGTCTTGCCTCCGCTA 59.403 57.895 0.00 0.00 35.36 4.26
186 187 0.179000 CCTTGTCTTGCCTCCGCTAT 59.821 55.000 0.00 0.00 35.36 2.97
187 188 1.407437 CCTTGTCTTGCCTCCGCTATT 60.407 52.381 0.00 0.00 35.36 1.73
188 189 2.359900 CTTGTCTTGCCTCCGCTATTT 58.640 47.619 0.00 0.00 35.36 1.40
189 190 2.024176 TGTCTTGCCTCCGCTATTTC 57.976 50.000 0.00 0.00 35.36 2.17
190 191 1.300481 GTCTTGCCTCCGCTATTTCC 58.700 55.000 0.00 0.00 35.36 3.13
191 192 0.179084 TCTTGCCTCCGCTATTTCCG 60.179 55.000 0.00 0.00 35.36 4.30
192 193 1.153249 TTGCCTCCGCTATTTCCGG 60.153 57.895 0.00 0.00 46.88 5.14
193 194 1.906105 TTGCCTCCGCTATTTCCGGT 61.906 55.000 0.00 0.00 45.71 5.28
194 195 1.594564 GCCTCCGCTATTTCCGGTC 60.595 63.158 0.00 0.00 45.71 4.79
195 196 2.029307 GCCTCCGCTATTTCCGGTCT 62.029 60.000 0.00 0.00 45.71 3.85
196 197 0.464452 CCTCCGCTATTTCCGGTCTT 59.536 55.000 0.00 0.00 45.71 3.01
197 198 1.134491 CCTCCGCTATTTCCGGTCTTT 60.134 52.381 0.00 0.00 45.71 2.52
198 199 1.933853 CTCCGCTATTTCCGGTCTTTG 59.066 52.381 0.00 0.00 45.71 2.77
199 200 1.014352 CCGCTATTTCCGGTCTTTGG 58.986 55.000 0.00 0.00 40.84 3.28
200 201 0.377203 CGCTATTTCCGGTCTTTGGC 59.623 55.000 0.00 0.00 0.00 4.52
201 202 1.751437 GCTATTTCCGGTCTTTGGCT 58.249 50.000 0.00 0.00 0.00 4.75
202 203 2.092323 GCTATTTCCGGTCTTTGGCTT 58.908 47.619 0.00 0.00 0.00 4.35
203 204 2.159379 GCTATTTCCGGTCTTTGGCTTG 60.159 50.000 0.00 0.00 0.00 4.01
204 205 1.256812 ATTTCCGGTCTTTGGCTTGG 58.743 50.000 0.00 0.00 0.00 3.61
205 206 0.106419 TTTCCGGTCTTTGGCTTGGT 60.106 50.000 0.00 0.00 0.00 3.67
206 207 0.536460 TTCCGGTCTTTGGCTTGGTC 60.536 55.000 0.00 0.00 0.00 4.02
207 208 1.073199 CCGGTCTTTGGCTTGGTCT 59.927 57.895 0.00 0.00 0.00 3.85
208 209 0.955919 CCGGTCTTTGGCTTGGTCTC 60.956 60.000 0.00 0.00 0.00 3.36
209 210 0.250295 CGGTCTTTGGCTTGGTCTCA 60.250 55.000 0.00 0.00 0.00 3.27
210 211 1.813862 CGGTCTTTGGCTTGGTCTCAA 60.814 52.381 0.00 0.00 0.00 3.02
211 212 1.609072 GGTCTTTGGCTTGGTCTCAAC 59.391 52.381 0.00 0.00 0.00 3.18
212 213 2.576615 GTCTTTGGCTTGGTCTCAACT 58.423 47.619 0.00 0.00 0.00 3.16
213 214 2.550180 GTCTTTGGCTTGGTCTCAACTC 59.450 50.000 0.00 0.00 0.00 3.01
214 215 2.439507 TCTTTGGCTTGGTCTCAACTCT 59.560 45.455 0.00 0.00 0.00 3.24
215 216 2.550830 TTGGCTTGGTCTCAACTCTC 57.449 50.000 0.00 0.00 0.00 3.20
216 217 0.318441 TGGCTTGGTCTCAACTCTCG 59.682 55.000 0.00 0.00 0.00 4.04
217 218 0.603569 GGCTTGGTCTCAACTCTCGA 59.396 55.000 0.00 0.00 0.00 4.04
218 219 1.670380 GGCTTGGTCTCAACTCTCGAC 60.670 57.143 0.00 0.00 0.00 4.20
219 220 1.970447 CTTGGTCTCAACTCTCGACG 58.030 55.000 0.00 0.00 0.00 5.12
220 221 1.535896 CTTGGTCTCAACTCTCGACGA 59.464 52.381 0.00 0.00 0.00 4.20
221 222 1.157585 TGGTCTCAACTCTCGACGAG 58.842 55.000 18.91 18.91 45.56 4.18
222 223 0.179184 GGTCTCAACTCTCGACGAGC 60.179 60.000 20.11 3.27 43.85 5.03
223 224 0.179184 GTCTCAACTCTCGACGAGCC 60.179 60.000 20.11 0.00 43.85 4.70
224 225 1.137825 CTCAACTCTCGACGAGCCC 59.862 63.158 20.11 0.00 43.85 5.19
225 226 2.202492 CAACTCTCGACGAGCCCG 60.202 66.667 20.11 12.54 43.85 6.13
235 236 2.257371 CGAGCCCGTTGTCTTCGA 59.743 61.111 0.00 0.00 0.00 3.71
236 237 2.087009 CGAGCCCGTTGTCTTCGAC 61.087 63.158 0.00 0.00 0.00 4.20
237 238 1.289380 GAGCCCGTTGTCTTCGACT 59.711 57.895 0.00 0.00 33.15 4.18
238 239 0.319641 GAGCCCGTTGTCTTCGACTT 60.320 55.000 0.00 0.00 33.15 3.01
239 240 0.319641 AGCCCGTTGTCTTCGACTTC 60.320 55.000 0.00 0.00 33.15 3.01
240 241 0.599204 GCCCGTTGTCTTCGACTTCA 60.599 55.000 0.00 0.00 33.15 3.02
241 242 1.419374 CCCGTTGTCTTCGACTTCAG 58.581 55.000 0.00 0.00 33.15 3.02
242 243 0.784778 CCGTTGTCTTCGACTTCAGC 59.215 55.000 0.00 0.00 33.15 4.26
243 244 1.603172 CCGTTGTCTTCGACTTCAGCT 60.603 52.381 0.00 0.00 33.15 4.24
244 245 1.716581 CGTTGTCTTCGACTTCAGCTC 59.283 52.381 0.00 0.00 33.15 4.09
245 246 1.716581 GTTGTCTTCGACTTCAGCTCG 59.283 52.381 0.00 0.00 33.15 5.03
246 247 0.387367 TGTCTTCGACTTCAGCTCGC 60.387 55.000 0.00 0.00 33.15 5.03
247 248 1.073768 GTCTTCGACTTCAGCTCGCC 61.074 60.000 0.00 0.00 0.00 5.54
248 249 2.126463 TTCGACTTCAGCTCGCCG 60.126 61.111 0.00 0.00 0.00 6.46
249 250 2.804368 CTTCGACTTCAGCTCGCCGT 62.804 60.000 0.00 0.00 0.00 5.68
250 251 3.175240 CGACTTCAGCTCGCCGTG 61.175 66.667 0.00 0.00 0.00 4.94
251 252 3.482783 GACTTCAGCTCGCCGTGC 61.483 66.667 2.41 2.41 0.00 5.34
262 263 4.279043 GCCGTGCGGTTTTGCCTT 62.279 61.111 12.46 0.00 37.65 4.35
263 264 2.354539 CCGTGCGGTTTTGCCTTG 60.355 61.111 1.93 0.00 34.25 3.61
264 265 2.354539 CGTGCGGTTTTGCCTTGG 60.355 61.111 0.00 0.00 34.25 3.61
265 266 2.840066 CGTGCGGTTTTGCCTTGGA 61.840 57.895 0.00 0.00 34.25 3.53
266 267 1.007387 GTGCGGTTTTGCCTTGGAG 60.007 57.895 0.00 0.00 34.25 3.86
267 268 2.199652 TGCGGTTTTGCCTTGGAGG 61.200 57.895 0.00 0.00 38.80 4.30
268 269 1.901464 GCGGTTTTGCCTTGGAGGA 60.901 57.895 0.00 0.00 37.67 3.71
269 270 1.250840 GCGGTTTTGCCTTGGAGGAT 61.251 55.000 0.00 0.00 37.67 3.24
270 271 0.811281 CGGTTTTGCCTTGGAGGATC 59.189 55.000 0.00 0.00 37.67 3.36
271 272 0.811281 GGTTTTGCCTTGGAGGATCG 59.189 55.000 0.00 0.00 37.67 3.69
272 273 1.613255 GGTTTTGCCTTGGAGGATCGA 60.613 52.381 0.00 0.00 37.67 3.59
273 274 1.468914 GTTTTGCCTTGGAGGATCGAC 59.531 52.381 0.00 0.00 37.67 4.20
274 275 0.391130 TTTGCCTTGGAGGATCGACG 60.391 55.000 0.00 0.00 37.67 5.12
275 276 2.107141 GCCTTGGAGGATCGACGG 59.893 66.667 0.00 0.00 37.67 4.79
276 277 2.722201 GCCTTGGAGGATCGACGGT 61.722 63.158 0.00 0.00 37.67 4.83
277 278 1.141881 CCTTGGAGGATCGACGGTG 59.858 63.158 0.00 0.00 37.67 4.94
278 279 1.141881 CTTGGAGGATCGACGGTGG 59.858 63.158 0.00 0.00 34.37 4.61
279 280 2.298158 CTTGGAGGATCGACGGTGGG 62.298 65.000 0.00 0.00 34.37 4.61
280 281 3.537874 GGAGGATCGACGGTGGGG 61.538 72.222 0.00 0.00 34.37 4.96
281 282 2.758737 GAGGATCGACGGTGGGGT 60.759 66.667 0.00 0.00 0.00 4.95
282 283 2.758737 AGGATCGACGGTGGGGTC 60.759 66.667 0.00 0.00 0.00 4.46
283 284 3.846430 GGATCGACGGTGGGGTCC 61.846 72.222 0.00 0.00 33.30 4.46
284 285 3.072468 GATCGACGGTGGGGTCCA 61.072 66.667 0.00 0.00 33.30 4.02
292 293 4.394712 GTGGGGTCCACGCTCAGG 62.395 72.222 0.00 0.00 44.95 3.86
316 317 4.961511 GCACGGCACAGTCGACCA 62.962 66.667 13.01 0.00 33.65 4.02
317 318 3.036084 CACGGCACAGTCGACCAC 61.036 66.667 13.01 0.00 33.65 4.16
318 319 4.640855 ACGGCACAGTCGACCACG 62.641 66.667 13.01 12.12 41.26 4.94
319 320 4.337060 CGGCACAGTCGACCACGA 62.337 66.667 13.01 0.00 46.56 4.35
330 331 2.286872 TCGACCACGAGAGAGTTATCC 58.713 52.381 0.00 0.00 43.81 2.59
331 332 1.334243 CGACCACGAGAGAGTTATCCC 59.666 57.143 0.00 0.00 42.66 3.85
332 333 2.657143 GACCACGAGAGAGTTATCCCT 58.343 52.381 0.00 0.00 0.00 4.20
333 334 3.743584 CGACCACGAGAGAGTTATCCCTA 60.744 52.174 0.00 0.00 42.66 3.53
334 335 4.400120 GACCACGAGAGAGTTATCCCTAT 58.600 47.826 0.00 0.00 0.00 2.57
335 336 4.400120 ACCACGAGAGAGTTATCCCTATC 58.600 47.826 0.00 0.00 0.00 2.08
336 337 4.141228 ACCACGAGAGAGTTATCCCTATCA 60.141 45.833 0.00 0.00 0.00 2.15
337 338 4.216687 CCACGAGAGAGTTATCCCTATCAC 59.783 50.000 0.00 0.00 0.00 3.06
338 339 4.216687 CACGAGAGAGTTATCCCTATCACC 59.783 50.000 0.00 0.00 0.00 4.02
339 340 4.141228 ACGAGAGAGTTATCCCTATCACCA 60.141 45.833 0.00 0.00 0.00 4.17
340 341 4.457603 CGAGAGAGTTATCCCTATCACCAG 59.542 50.000 0.00 0.00 0.00 4.00
341 342 4.156477 AGAGAGTTATCCCTATCACCAGC 58.844 47.826 0.00 0.00 0.00 4.85
342 343 3.898123 GAGAGTTATCCCTATCACCAGCA 59.102 47.826 0.00 0.00 0.00 4.41
343 344 4.298626 AGAGTTATCCCTATCACCAGCAA 58.701 43.478 0.00 0.00 0.00 3.91
344 345 4.721776 AGAGTTATCCCTATCACCAGCAAA 59.278 41.667 0.00 0.00 0.00 3.68
345 346 5.191722 AGAGTTATCCCTATCACCAGCAAAA 59.808 40.000 0.00 0.00 0.00 2.44
346 347 5.826643 AGTTATCCCTATCACCAGCAAAAA 58.173 37.500 0.00 0.00 0.00 1.94
378 379 9.921637 TCCAACAAAAATGATACTAAAATCACC 57.078 29.630 0.00 0.00 38.65 4.02
379 380 9.927668 CCAACAAAAATGATACTAAAATCACCT 57.072 29.630 0.00 0.00 38.65 4.00
386 387 8.438676 AATGATACTAAAATCACCTGTACTGC 57.561 34.615 0.00 0.00 38.65 4.40
387 388 6.941857 TGATACTAAAATCACCTGTACTGCA 58.058 36.000 0.00 0.00 30.92 4.41
388 389 7.390823 TGATACTAAAATCACCTGTACTGCAA 58.609 34.615 0.00 0.00 30.92 4.08
389 390 7.880713 TGATACTAAAATCACCTGTACTGCAAA 59.119 33.333 0.00 0.00 30.92 3.68
390 391 6.560253 ACTAAAATCACCTGTACTGCAAAG 57.440 37.500 0.00 0.00 0.00 2.77
391 392 6.062095 ACTAAAATCACCTGTACTGCAAAGT 58.938 36.000 0.00 0.00 0.00 2.66
392 393 5.438761 AAAATCACCTGTACTGCAAAGTC 57.561 39.130 0.00 0.00 0.00 3.01
393 394 3.769739 ATCACCTGTACTGCAAAGTCA 57.230 42.857 0.00 0.00 0.00 3.41
394 395 3.769739 TCACCTGTACTGCAAAGTCAT 57.230 42.857 0.00 0.00 0.00 3.06
395 396 3.402110 TCACCTGTACTGCAAAGTCATG 58.598 45.455 0.00 0.00 0.00 3.07
396 397 3.141398 CACCTGTACTGCAAAGTCATGT 58.859 45.455 0.00 0.00 0.00 3.21
397 398 4.039852 TCACCTGTACTGCAAAGTCATGTA 59.960 41.667 0.00 0.00 0.00 2.29
398 399 4.937620 CACCTGTACTGCAAAGTCATGTAT 59.062 41.667 0.00 0.00 0.00 2.29
399 400 5.412594 CACCTGTACTGCAAAGTCATGTATT 59.587 40.000 0.00 0.00 0.00 1.89
400 401 6.003950 ACCTGTACTGCAAAGTCATGTATTT 58.996 36.000 0.00 0.00 0.00 1.40
401 402 6.490040 ACCTGTACTGCAAAGTCATGTATTTT 59.510 34.615 0.00 0.00 0.00 1.82
402 403 7.663905 ACCTGTACTGCAAAGTCATGTATTTTA 59.336 33.333 0.00 0.00 0.00 1.52
403 404 8.677300 CCTGTACTGCAAAGTCATGTATTTTAT 58.323 33.333 0.00 0.00 0.00 1.40
406 407 9.503427 GTACTGCAAAGTCATGTATTTTATTCC 57.497 33.333 0.00 0.00 0.00 3.01
407 408 7.547227 ACTGCAAAGTCATGTATTTTATTCCC 58.453 34.615 0.00 0.00 0.00 3.97
408 409 7.178274 ACTGCAAAGTCATGTATTTTATTCCCA 59.822 33.333 0.00 0.00 0.00 4.37
409 410 8.076910 TGCAAAGTCATGTATTTTATTCCCAT 57.923 30.769 0.00 0.00 0.00 4.00
410 411 8.196771 TGCAAAGTCATGTATTTTATTCCCATC 58.803 33.333 0.00 0.00 0.00 3.51
411 412 7.653311 GCAAAGTCATGTATTTTATTCCCATCC 59.347 37.037 0.00 0.00 0.00 3.51
412 413 8.917088 CAAAGTCATGTATTTTATTCCCATCCT 58.083 33.333 0.00 0.00 0.00 3.24
413 414 8.469309 AAGTCATGTATTTTATTCCCATCCTG 57.531 34.615 0.00 0.00 0.00 3.86
414 415 7.815383 AGTCATGTATTTTATTCCCATCCTGA 58.185 34.615 0.00 0.00 0.00 3.86
415 416 8.451245 AGTCATGTATTTTATTCCCATCCTGAT 58.549 33.333 0.00 0.00 0.00 2.90
416 417 9.082313 GTCATGTATTTTATTCCCATCCTGATT 57.918 33.333 0.00 0.00 0.00 2.57
417 418 9.659135 TCATGTATTTTATTCCCATCCTGATTT 57.341 29.630 0.00 0.00 0.00 2.17
420 421 8.203485 TGTATTTTATTCCCATCCTGATTTTGC 58.797 33.333 0.00 0.00 0.00 3.68
421 422 6.617782 TTTTATTCCCATCCTGATTTTGCA 57.382 33.333 0.00 0.00 0.00 4.08
422 423 6.617782 TTTATTCCCATCCTGATTTTGCAA 57.382 33.333 0.00 0.00 0.00 4.08
423 424 4.748277 ATTCCCATCCTGATTTTGCAAG 57.252 40.909 0.00 0.00 0.00 4.01
424 425 3.454719 TCCCATCCTGATTTTGCAAGA 57.545 42.857 0.00 0.00 0.00 3.02
425 426 3.359033 TCCCATCCTGATTTTGCAAGAG 58.641 45.455 0.00 0.00 0.00 2.85
426 427 3.010472 TCCCATCCTGATTTTGCAAGAGA 59.990 43.478 0.00 0.00 0.00 3.10
427 428 3.765511 CCCATCCTGATTTTGCAAGAGAA 59.234 43.478 0.00 0.00 0.00 2.87
428 429 4.142227 CCCATCCTGATTTTGCAAGAGAAG 60.142 45.833 0.00 0.00 0.00 2.85
429 430 4.703575 CCATCCTGATTTTGCAAGAGAAGA 59.296 41.667 0.00 0.00 0.00 2.87
430 431 5.360144 CCATCCTGATTTTGCAAGAGAAGAT 59.640 40.000 0.00 0.00 0.00 2.40
431 432 6.127423 CCATCCTGATTTTGCAAGAGAAGATT 60.127 38.462 0.00 0.00 0.00 2.40
432 433 6.506500 TCCTGATTTTGCAAGAGAAGATTC 57.493 37.500 0.00 0.00 0.00 2.52
433 434 6.005823 TCCTGATTTTGCAAGAGAAGATTCA 58.994 36.000 0.00 0.00 0.00 2.57
434 435 6.491062 TCCTGATTTTGCAAGAGAAGATTCAA 59.509 34.615 0.00 0.00 0.00 2.69
435 436 7.014518 TCCTGATTTTGCAAGAGAAGATTCAAA 59.985 33.333 0.00 0.00 0.00 2.69
436 437 7.654520 CCTGATTTTGCAAGAGAAGATTCAAAA 59.345 33.333 0.00 0.00 37.66 2.44
437 438 8.356533 TGATTTTGCAAGAGAAGATTCAAAAC 57.643 30.769 0.00 0.00 36.60 2.43
438 439 7.980662 TGATTTTGCAAGAGAAGATTCAAAACA 59.019 29.630 0.00 0.00 36.60 2.83
439 440 7.524294 TTTTGCAAGAGAAGATTCAAAACAC 57.476 32.000 0.00 0.00 31.17 3.32
440 441 5.186996 TGCAAGAGAAGATTCAAAACACC 57.813 39.130 0.00 0.00 0.00 4.16
441 442 4.644234 TGCAAGAGAAGATTCAAAACACCA 59.356 37.500 0.00 0.00 0.00 4.17
442 443 5.302568 TGCAAGAGAAGATTCAAAACACCAT 59.697 36.000 0.00 0.00 0.00 3.55
443 444 6.489700 TGCAAGAGAAGATTCAAAACACCATA 59.510 34.615 0.00 0.00 0.00 2.74
444 445 7.025963 GCAAGAGAAGATTCAAAACACCATAG 58.974 38.462 0.00 0.00 0.00 2.23
445 446 7.094634 GCAAGAGAAGATTCAAAACACCATAGA 60.095 37.037 0.00 0.00 0.00 1.98
446 447 8.786898 CAAGAGAAGATTCAAAACACCATAGAA 58.213 33.333 0.00 0.00 0.00 2.10
447 448 8.558973 AGAGAAGATTCAAAACACCATAGAAG 57.441 34.615 0.00 0.00 0.00 2.85
448 449 8.378565 AGAGAAGATTCAAAACACCATAGAAGA 58.621 33.333 0.00 0.00 0.00 2.87
449 450 9.171877 GAGAAGATTCAAAACACCATAGAAGAT 57.828 33.333 0.00 0.00 0.00 2.40
450 451 8.954350 AGAAGATTCAAAACACCATAGAAGATG 58.046 33.333 0.00 0.00 0.00 2.90
451 452 8.868522 AAGATTCAAAACACCATAGAAGATGA 57.131 30.769 0.00 0.00 0.00 2.92
452 453 9.471702 AAGATTCAAAACACCATAGAAGATGAT 57.528 29.630 0.00 0.00 0.00 2.45
453 454 8.900781 AGATTCAAAACACCATAGAAGATGATG 58.099 33.333 0.00 0.00 0.00 3.07
454 455 8.585471 ATTCAAAACACCATAGAAGATGATGT 57.415 30.769 0.00 0.00 0.00 3.06
455 456 9.685276 ATTCAAAACACCATAGAAGATGATGTA 57.315 29.630 0.00 0.00 0.00 2.29
456 457 8.492673 TCAAAACACCATAGAAGATGATGTAC 57.507 34.615 0.00 0.00 0.00 2.90
457 458 8.321353 TCAAAACACCATAGAAGATGATGTACT 58.679 33.333 0.00 0.00 0.00 2.73
458 459 8.950210 CAAAACACCATAGAAGATGATGTACTT 58.050 33.333 0.00 0.00 0.00 2.24
459 460 8.723942 AAACACCATAGAAGATGATGTACTTC 57.276 34.615 1.85 1.85 41.64 3.01
467 468 7.341445 AGAAGATGATGTACTTCTACAGGAC 57.659 40.000 9.87 0.00 46.99 3.85
468 469 5.759506 AGATGATGTACTTCTACAGGACG 57.240 43.478 9.87 0.00 39.67 4.79
469 470 5.437946 AGATGATGTACTTCTACAGGACGA 58.562 41.667 9.87 0.00 39.67 4.20
470 471 5.529430 AGATGATGTACTTCTACAGGACGAG 59.471 44.000 9.87 0.00 39.67 4.18
471 472 4.586884 TGATGTACTTCTACAGGACGAGT 58.413 43.478 9.87 0.00 39.67 4.18
472 473 5.737860 TGATGTACTTCTACAGGACGAGTA 58.262 41.667 9.87 0.00 39.67 2.59
473 474 6.175471 TGATGTACTTCTACAGGACGAGTAA 58.825 40.000 9.87 0.00 39.67 2.24
474 475 6.656270 TGATGTACTTCTACAGGACGAGTAAA 59.344 38.462 9.87 0.00 39.67 2.01
475 476 7.338703 TGATGTACTTCTACAGGACGAGTAAAT 59.661 37.037 9.87 0.00 39.67 1.40
476 477 7.081526 TGTACTTCTACAGGACGAGTAAATC 57.918 40.000 0.00 0.00 39.67 2.17
477 478 7.466996 ATGTACTTCTACAGGACGAGTAAATCG 60.467 40.741 0.00 0.00 45.41 3.34
531 532 1.738099 CGCTCCACGGAACAGAAGG 60.738 63.158 0.00 0.00 38.44 3.46
567 568 0.605589 CGTTGCCCCCAAATTAAGCA 59.394 50.000 0.00 0.00 31.68 3.91
622 626 2.029518 CTCACGGCAGCACACTCA 59.970 61.111 0.00 0.00 0.00 3.41
657 661 2.927856 TCCAGCCGCCTTCTTCCA 60.928 61.111 0.00 0.00 0.00 3.53
665 669 1.026718 CGCCTTCTTCCACACCATCC 61.027 60.000 0.00 0.00 0.00 3.51
669 673 2.350522 CTTCTTCCACACCATCCTTCG 58.649 52.381 0.00 0.00 0.00 3.79
674 678 1.599047 CACACCATCCTTCGCCTCT 59.401 57.895 0.00 0.00 0.00 3.69
677 681 2.293318 ACCATCCTTCGCCTCTGCA 61.293 57.895 0.00 0.00 37.32 4.41
958 1387 0.251474 AAGCTCAAGCATCCAAGCCA 60.251 50.000 4.59 0.00 45.16 4.75
963 1392 1.077985 AAGCATCCAAGCCAGCCTT 59.922 52.632 0.00 0.00 34.23 4.35
1200 1635 1.302511 GGCACCGCTGAAGAAGGAA 60.303 57.895 0.00 0.00 0.00 3.36
1230 1665 1.010574 CGTCTGATCGGTCGAGCTC 60.011 63.158 14.92 2.73 0.00 4.09
1243 1678 1.313129 GAGCTCCCTCCTCCTCCTT 59.687 63.158 0.87 0.00 31.68 3.36
1244 1679 0.558712 GAGCTCCCTCCTCCTCCTTA 59.441 60.000 0.87 0.00 31.68 2.69
1325 1788 2.351455 TGTTGCTCGTTTCTTGTGTGA 58.649 42.857 0.00 0.00 0.00 3.58
1328 1791 1.264020 TGCTCGTTTCTTGTGTGATGC 59.736 47.619 0.00 0.00 0.00 3.91
1341 1804 2.744202 GTGTGATGCTTACTGTGAAGGG 59.256 50.000 0.00 0.00 0.00 3.95
1342 1805 2.371841 TGTGATGCTTACTGTGAAGGGT 59.628 45.455 0.00 0.00 0.00 4.34
1381 1853 3.058983 TGATTTGTGATCACAGTTGCGTC 60.059 43.478 26.48 18.31 42.94 5.19
1413 1885 4.919206 TGCGCAAATCGATGTAATGAATT 58.081 34.783 8.16 0.00 41.67 2.17
1414 1886 6.054035 TGCGCAAATCGATGTAATGAATTA 57.946 33.333 8.16 0.00 41.67 1.40
1415 1887 5.906838 TGCGCAAATCGATGTAATGAATTAC 59.093 36.000 8.16 6.29 40.73 1.89
1416 1888 6.136071 GCGCAAATCGATGTAATGAATTACT 58.864 36.000 0.30 1.29 40.84 2.24
1417 1889 7.042389 TGCGCAAATCGATGTAATGAATTACTA 60.042 33.333 8.16 2.54 40.84 1.82
1418 1890 7.957484 GCGCAAATCGATGTAATGAATTACTAT 59.043 33.333 0.30 6.38 40.84 2.12
1471 1948 3.740321 CGTTGCTTGGTTTGTATGCAAAT 59.260 39.130 12.26 0.00 45.11 2.32
1472 1949 4.143347 CGTTGCTTGGTTTGTATGCAAATC 60.143 41.667 12.26 12.19 45.11 2.17
1499 1976 3.571119 CAGGCTTGCGTCTGAAGG 58.429 61.111 0.00 0.00 45.75 3.46
1530 2007 3.354948 TGGGTTTCTGATGTGATGGAG 57.645 47.619 0.00 0.00 0.00 3.86
1538 2015 3.118992 TCTGATGTGATGGAGGAGTTTCG 60.119 47.826 0.00 0.00 0.00 3.46
1596 2075 8.278639 AGATTCAGGAACTAGATAGAGTTGAGA 58.721 37.037 0.00 0.00 39.79 3.27
1624 2103 1.891011 GCCCCCGAAAGTTCCTTGAAT 60.891 52.381 0.00 0.00 0.00 2.57
1652 2144 1.064621 CGATGCAAGGCGAATTGGG 59.935 57.895 0.00 0.00 0.00 4.12
1711 2206 4.824289 CATTTCTTCCCCAAATGTTCCAG 58.176 43.478 0.00 0.00 36.75 3.86
1796 2321 5.618056 TCTTCAGATGTTTTTGCTGCTAG 57.382 39.130 0.00 0.00 0.00 3.42
1813 2338 5.866633 GCTGCTAGCAGTAATACTCATAAGG 59.133 44.000 37.91 14.51 45.24 2.69
1829 2354 8.522542 ACTCATAAGGAAGAAGATAGTAACGT 57.477 34.615 0.00 0.00 0.00 3.99
1832 2357 5.401531 AAGGAAGAAGATAGTAACGTGCA 57.598 39.130 0.00 0.00 0.00 4.57
1851 2376 7.433680 ACGTGCAGAACTATATCAATGTATGA 58.566 34.615 0.00 0.00 43.67 2.15
1852 2377 7.596621 ACGTGCAGAACTATATCAATGTATGAG 59.403 37.037 0.00 0.00 42.53 2.90
1853 2378 7.062722 CGTGCAGAACTATATCAATGTATGAGG 59.937 40.741 0.00 0.00 42.53 3.86
1869 2394 3.454719 TGAGGATCAAATGGAGGCAAA 57.545 42.857 0.00 0.00 45.97 3.68
1870 2395 3.091545 TGAGGATCAAATGGAGGCAAAC 58.908 45.455 0.00 0.00 45.97 2.93
1903 2577 4.350816 TGGTAATTGTATGGAGAGGGGATG 59.649 45.833 0.00 0.00 0.00 3.51
1937 2611 4.980339 ATTTTGATTTTGCCCTCTGGTT 57.020 36.364 0.00 0.00 0.00 3.67
1938 2612 4.335400 TTTTGATTTTGCCCTCTGGTTC 57.665 40.909 0.00 0.00 0.00 3.62
1939 2613 2.978156 TGATTTTGCCCTCTGGTTCT 57.022 45.000 0.00 0.00 0.00 3.01
1940 2614 2.517959 TGATTTTGCCCTCTGGTTCTG 58.482 47.619 0.00 0.00 0.00 3.02
1941 2615 1.821136 GATTTTGCCCTCTGGTTCTGG 59.179 52.381 0.00 0.00 0.00 3.86
1942 2616 0.555769 TTTTGCCCTCTGGTTCTGGT 59.444 50.000 0.00 0.00 0.00 4.00
1960 2634 5.971763 TCTGGTACAAGCACAAACAAAAAT 58.028 33.333 0.00 0.00 38.70 1.82
1977 2652 6.167685 ACAAAAATCAACACATCATCATGGG 58.832 36.000 0.00 0.00 39.64 4.00
2002 2702 7.062255 GGCACAGTTCATCTTTTTAATTACAGC 59.938 37.037 0.00 0.00 0.00 4.40
2014 2714 8.885494 TTTTTAATTACAGCAAGTGCAAATCT 57.115 26.923 6.00 0.00 45.16 2.40
2053 2779 3.242543 CGATTGCAATCAGCTAACCACTC 60.243 47.826 32.72 8.72 45.94 3.51
2078 2813 5.353678 TGTCTTGGTTTGCAATTTCCTTTTG 59.646 36.000 0.00 0.00 0.00 2.44
2112 2847 2.068277 GAAGCTGCATGGAATCGGGC 62.068 60.000 1.02 0.00 0.00 6.13
2201 2936 1.548269 AGCTGGCACTGTCTCTTCTAC 59.452 52.381 0.00 0.00 0.00 2.59
2202 2937 1.548269 GCTGGCACTGTCTCTTCTACT 59.452 52.381 0.00 0.00 0.00 2.57
2217 2952 7.975058 GTCTCTTCTACTAAATACACCTGGTTC 59.025 40.741 0.00 0.00 0.00 3.62
2218 2953 7.123847 TCTCTTCTACTAAATACACCTGGTTCC 59.876 40.741 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.259065 TAGCCCGTGAGACCTGATCT 59.741 55.000 0.00 0.00 41.91 2.75
10 11 0.671251 CTAGCCCGTGAGACCTGATC 59.329 60.000 0.00 0.00 0.00 2.92
11 12 1.395826 GCTAGCCCGTGAGACCTGAT 61.396 60.000 2.29 0.00 0.00 2.90
12 13 2.052690 GCTAGCCCGTGAGACCTGA 61.053 63.158 2.29 0.00 0.00 3.86
13 14 2.290122 CTGCTAGCCCGTGAGACCTG 62.290 65.000 13.29 0.00 0.00 4.00
14 15 2.037367 TGCTAGCCCGTGAGACCT 59.963 61.111 13.29 0.00 0.00 3.85
15 16 2.496817 CTGCTAGCCCGTGAGACC 59.503 66.667 13.29 0.00 0.00 3.85
16 17 2.352032 ACCTGCTAGCCCGTGAGAC 61.352 63.158 13.29 0.00 0.00 3.36
17 18 2.037367 ACCTGCTAGCCCGTGAGA 59.963 61.111 13.29 0.00 0.00 3.27
18 19 2.185350 CACCTGCTAGCCCGTGAG 59.815 66.667 21.00 8.45 0.00 3.51
19 20 2.283604 TCACCTGCTAGCCCGTGA 60.284 61.111 23.11 23.11 32.99 4.35
20 21 2.185350 CTCACCTGCTAGCCCGTG 59.815 66.667 20.02 20.02 0.00 4.94
21 22 3.077556 CCTCACCTGCTAGCCCGT 61.078 66.667 13.29 5.00 0.00 5.28
22 23 4.537433 GCCTCACCTGCTAGCCCG 62.537 72.222 13.29 4.28 0.00 6.13
23 24 4.182433 GGCCTCACCTGCTAGCCC 62.182 72.222 13.29 0.00 37.66 5.19
24 25 4.182433 GGGCCTCACCTGCTAGCC 62.182 72.222 13.29 0.00 43.09 3.93
25 26 2.750657 ATGGGCCTCACCTGCTAGC 61.751 63.158 8.10 8.10 39.10 3.42
26 27 1.147824 CATGGGCCTCACCTGCTAG 59.852 63.158 4.53 0.00 39.10 3.42
27 28 3.047807 GCATGGGCCTCACCTGCTA 62.048 63.158 4.53 0.00 39.10 3.49
28 29 4.437587 GCATGGGCCTCACCTGCT 62.438 66.667 4.53 0.00 39.10 4.24
29 30 4.437587 AGCATGGGCCTCACCTGC 62.438 66.667 4.53 7.18 42.56 4.85
30 31 2.280404 ATCAGCATGGGCCTCACCTG 62.280 60.000 4.53 9.58 42.56 4.00
31 32 0.695462 TATCAGCATGGGCCTCACCT 60.695 55.000 4.53 0.00 42.56 4.00
32 33 0.250640 CTATCAGCATGGGCCTCACC 60.251 60.000 4.53 0.00 42.56 4.02
33 34 0.761187 TCTATCAGCATGGGCCTCAC 59.239 55.000 4.53 0.00 42.56 3.51
34 35 1.350019 CATCTATCAGCATGGGCCTCA 59.650 52.381 4.53 0.00 42.56 3.86
35 36 1.627329 TCATCTATCAGCATGGGCCTC 59.373 52.381 4.53 0.00 42.56 4.70
36 37 1.738474 TCATCTATCAGCATGGGCCT 58.262 50.000 4.53 0.00 42.56 5.19
37 38 2.803030 ATCATCTATCAGCATGGGCC 57.197 50.000 0.00 0.00 42.56 5.80
38 39 4.575236 CACATATCATCTATCAGCATGGGC 59.425 45.833 0.00 0.00 41.61 5.36
39 40 5.816258 GTCACATATCATCTATCAGCATGGG 59.184 44.000 0.00 0.00 36.16 4.00
40 41 6.403878 TGTCACATATCATCTATCAGCATGG 58.596 40.000 0.00 0.00 36.16 3.66
41 42 8.494016 AATGTCACATATCATCTATCAGCATG 57.506 34.615 0.00 0.00 37.54 4.06
42 43 8.319146 TGAATGTCACATATCATCTATCAGCAT 58.681 33.333 0.00 0.00 0.00 3.79
43 44 7.601508 GTGAATGTCACATATCATCTATCAGCA 59.398 37.037 3.52 0.00 46.22 4.41
44 45 7.961855 GTGAATGTCACATATCATCTATCAGC 58.038 38.462 3.52 0.00 46.22 4.26
60 61 8.058667 AGATGCTTTATGATTTGTGAATGTCA 57.941 30.769 0.00 0.00 0.00 3.58
67 68 9.674824 GGAAGATTAGATGCTTTATGATTTGTG 57.325 33.333 0.00 0.00 0.00 3.33
68 69 8.854117 GGGAAGATTAGATGCTTTATGATTTGT 58.146 33.333 0.00 0.00 0.00 2.83
69 70 8.302438 GGGGAAGATTAGATGCTTTATGATTTG 58.698 37.037 0.00 0.00 0.00 2.32
70 71 8.230306 AGGGGAAGATTAGATGCTTTATGATTT 58.770 33.333 0.00 0.00 0.00 2.17
71 72 7.763613 AGGGGAAGATTAGATGCTTTATGATT 58.236 34.615 0.00 0.00 0.00 2.57
72 73 7.340531 AGGGGAAGATTAGATGCTTTATGAT 57.659 36.000 0.00 0.00 0.00 2.45
73 74 6.240002 GGAGGGGAAGATTAGATGCTTTATGA 60.240 42.308 0.00 0.00 0.00 2.15
74 75 5.942826 GGAGGGGAAGATTAGATGCTTTATG 59.057 44.000 0.00 0.00 0.00 1.90
75 76 5.014649 GGGAGGGGAAGATTAGATGCTTTAT 59.985 44.000 0.00 0.00 0.00 1.40
76 77 4.351111 GGGAGGGGAAGATTAGATGCTTTA 59.649 45.833 0.00 0.00 0.00 1.85
77 78 3.139211 GGGAGGGGAAGATTAGATGCTTT 59.861 47.826 0.00 0.00 0.00 3.51
78 79 2.713708 GGGAGGGGAAGATTAGATGCTT 59.286 50.000 0.00 0.00 0.00 3.91
79 80 2.343625 GGGAGGGGAAGATTAGATGCT 58.656 52.381 0.00 0.00 0.00 3.79
80 81 1.352687 GGGGAGGGGAAGATTAGATGC 59.647 57.143 0.00 0.00 0.00 3.91
81 82 1.988846 GGGGGAGGGGAAGATTAGATG 59.011 57.143 0.00 0.00 0.00 2.90
82 83 1.883387 AGGGGGAGGGGAAGATTAGAT 59.117 52.381 0.00 0.00 0.00 1.98
83 84 1.061346 CAGGGGGAGGGGAAGATTAGA 60.061 57.143 0.00 0.00 0.00 2.10
84 85 1.061346 TCAGGGGGAGGGGAAGATTAG 60.061 57.143 0.00 0.00 0.00 1.73
85 86 1.031939 TCAGGGGGAGGGGAAGATTA 58.968 55.000 0.00 0.00 0.00 1.75
86 87 0.351998 ATCAGGGGGAGGGGAAGATT 59.648 55.000 0.00 0.00 0.00 2.40
87 88 0.351998 AATCAGGGGGAGGGGAAGAT 59.648 55.000 0.00 0.00 0.00 2.40
88 89 0.123266 AAATCAGGGGGAGGGGAAGA 59.877 55.000 0.00 0.00 0.00 2.87
89 90 1.010795 AAAATCAGGGGGAGGGGAAG 58.989 55.000 0.00 0.00 0.00 3.46
90 91 1.007607 GAAAATCAGGGGGAGGGGAA 58.992 55.000 0.00 0.00 0.00 3.97
91 92 0.123266 AGAAAATCAGGGGGAGGGGA 59.877 55.000 0.00 0.00 0.00 4.81
92 93 1.907240 TAGAAAATCAGGGGGAGGGG 58.093 55.000 0.00 0.00 0.00 4.79
93 94 2.853077 AGTTAGAAAATCAGGGGGAGGG 59.147 50.000 0.00 0.00 0.00 4.30
94 95 4.445019 GCTAGTTAGAAAATCAGGGGGAGG 60.445 50.000 0.00 0.00 0.00 4.30
95 96 4.445019 GGCTAGTTAGAAAATCAGGGGGAG 60.445 50.000 0.00 0.00 0.00 4.30
96 97 3.458487 GGCTAGTTAGAAAATCAGGGGGA 59.542 47.826 0.00 0.00 0.00 4.81
97 98 3.435169 GGGCTAGTTAGAAAATCAGGGGG 60.435 52.174 0.00 0.00 0.00 5.40
98 99 3.744530 CGGGCTAGTTAGAAAATCAGGGG 60.745 52.174 0.00 0.00 0.00 4.79
99 100 3.118371 ACGGGCTAGTTAGAAAATCAGGG 60.118 47.826 0.00 0.00 0.00 4.45
100 101 3.871594 CACGGGCTAGTTAGAAAATCAGG 59.128 47.826 0.00 0.00 0.00 3.86
101 102 4.755411 TCACGGGCTAGTTAGAAAATCAG 58.245 43.478 0.00 0.00 0.00 2.90
102 103 4.464951 TCTCACGGGCTAGTTAGAAAATCA 59.535 41.667 0.00 0.00 0.00 2.57
103 104 4.804665 GTCTCACGGGCTAGTTAGAAAATC 59.195 45.833 0.00 0.00 0.00 2.17
104 105 4.382793 GGTCTCACGGGCTAGTTAGAAAAT 60.383 45.833 0.00 0.00 0.00 1.82
105 106 3.056322 GGTCTCACGGGCTAGTTAGAAAA 60.056 47.826 0.00 0.00 0.00 2.29
106 107 2.494870 GGTCTCACGGGCTAGTTAGAAA 59.505 50.000 0.00 0.00 0.00 2.52
107 108 2.097825 GGTCTCACGGGCTAGTTAGAA 58.902 52.381 0.00 0.00 0.00 2.10
108 109 1.284198 AGGTCTCACGGGCTAGTTAGA 59.716 52.381 0.00 0.00 0.00 2.10
109 110 1.765230 AGGTCTCACGGGCTAGTTAG 58.235 55.000 0.00 0.00 0.00 2.34
110 111 2.240667 ACTAGGTCTCACGGGCTAGTTA 59.759 50.000 0.00 0.00 0.00 2.24
111 112 1.005687 ACTAGGTCTCACGGGCTAGTT 59.994 52.381 0.00 0.00 0.00 2.24
112 113 0.624785 ACTAGGTCTCACGGGCTAGT 59.375 55.000 0.00 0.00 0.00 2.57
113 114 1.134037 AGACTAGGTCTCACGGGCTAG 60.134 57.143 0.00 0.00 38.71 3.42
114 115 0.917533 AGACTAGGTCTCACGGGCTA 59.082 55.000 0.00 0.00 38.71 3.93
115 116 1.692428 AGACTAGGTCTCACGGGCT 59.308 57.895 0.00 0.00 38.71 5.19
116 117 4.340620 AGACTAGGTCTCACGGGC 57.659 61.111 0.00 0.00 38.71 6.13
138 139 9.798994 GTAACGAGTATCTGAGGAAAAGAATTA 57.201 33.333 0.00 0.00 0.00 1.40
139 140 7.764901 GGTAACGAGTATCTGAGGAAAAGAATT 59.235 37.037 0.00 0.00 0.00 2.17
140 141 7.266400 GGTAACGAGTATCTGAGGAAAAGAAT 58.734 38.462 0.00 0.00 0.00 2.40
141 142 6.628185 GGTAACGAGTATCTGAGGAAAAGAA 58.372 40.000 0.00 0.00 0.00 2.52
142 143 6.205101 GGTAACGAGTATCTGAGGAAAAGA 57.795 41.667 0.00 0.00 0.00 2.52
160 161 0.605589 AGGCAAGACAAGGCGGTAAC 60.606 55.000 0.00 0.00 36.55 2.50
161 162 0.321298 GAGGCAAGACAAGGCGGTAA 60.321 55.000 0.00 0.00 36.55 2.85
162 163 1.295423 GAGGCAAGACAAGGCGGTA 59.705 57.895 0.00 0.00 36.55 4.02
163 164 2.032681 GAGGCAAGACAAGGCGGT 59.967 61.111 0.00 0.00 36.55 5.68
164 165 2.747855 GGAGGCAAGACAAGGCGG 60.748 66.667 0.00 0.00 36.55 6.13
165 166 3.121030 CGGAGGCAAGACAAGGCG 61.121 66.667 0.00 0.00 36.55 5.52
166 167 2.521958 TAGCGGAGGCAAGACAAGGC 62.522 60.000 0.00 0.00 43.41 4.35
167 168 0.179000 ATAGCGGAGGCAAGACAAGG 59.821 55.000 0.00 0.00 43.41 3.61
168 169 2.029838 AATAGCGGAGGCAAGACAAG 57.970 50.000 0.00 0.00 43.41 3.16
169 170 2.356135 GAAATAGCGGAGGCAAGACAA 58.644 47.619 0.00 0.00 43.41 3.18
170 171 1.406887 GGAAATAGCGGAGGCAAGACA 60.407 52.381 0.00 0.00 43.41 3.41
171 172 1.300481 GGAAATAGCGGAGGCAAGAC 58.700 55.000 0.00 0.00 43.41 3.01
172 173 0.179084 CGGAAATAGCGGAGGCAAGA 60.179 55.000 0.00 0.00 43.41 3.02
173 174 1.160329 CCGGAAATAGCGGAGGCAAG 61.160 60.000 0.00 0.00 43.41 4.01
174 175 1.153249 CCGGAAATAGCGGAGGCAA 60.153 57.895 0.00 0.00 43.41 4.52
175 176 2.306255 GACCGGAAATAGCGGAGGCA 62.306 60.000 9.46 0.00 43.41 4.75
176 177 1.594564 GACCGGAAATAGCGGAGGC 60.595 63.158 9.46 0.00 40.37 4.70
177 178 0.464452 AAGACCGGAAATAGCGGAGG 59.536 55.000 9.46 0.00 0.00 4.30
178 179 1.933853 CAAAGACCGGAAATAGCGGAG 59.066 52.381 9.46 0.00 0.00 4.63
179 180 1.406341 CCAAAGACCGGAAATAGCGGA 60.406 52.381 9.46 0.00 0.00 5.54
180 181 1.014352 CCAAAGACCGGAAATAGCGG 58.986 55.000 9.46 0.00 0.00 5.52
181 182 0.377203 GCCAAAGACCGGAAATAGCG 59.623 55.000 9.46 0.00 0.00 4.26
182 183 1.751437 AGCCAAAGACCGGAAATAGC 58.249 50.000 9.46 3.43 0.00 2.97
183 184 2.423538 CCAAGCCAAAGACCGGAAATAG 59.576 50.000 9.46 0.00 0.00 1.73
184 185 2.224917 ACCAAGCCAAAGACCGGAAATA 60.225 45.455 9.46 0.00 0.00 1.40
185 186 1.256812 CCAAGCCAAAGACCGGAAAT 58.743 50.000 9.46 0.00 0.00 2.17
186 187 0.106419 ACCAAGCCAAAGACCGGAAA 60.106 50.000 9.46 0.00 0.00 3.13
187 188 0.536460 GACCAAGCCAAAGACCGGAA 60.536 55.000 9.46 0.00 0.00 4.30
188 189 1.072505 GACCAAGCCAAAGACCGGA 59.927 57.895 9.46 0.00 0.00 5.14
189 190 0.955919 GAGACCAAGCCAAAGACCGG 60.956 60.000 0.00 0.00 0.00 5.28
190 191 0.250295 TGAGACCAAGCCAAAGACCG 60.250 55.000 0.00 0.00 0.00 4.79
191 192 1.609072 GTTGAGACCAAGCCAAAGACC 59.391 52.381 0.00 0.00 32.06 3.85
192 193 2.550180 GAGTTGAGACCAAGCCAAAGAC 59.450 50.000 0.00 0.00 32.06 3.01
193 194 2.439507 AGAGTTGAGACCAAGCCAAAGA 59.560 45.455 0.00 0.00 32.06 2.52
194 195 2.810852 GAGAGTTGAGACCAAGCCAAAG 59.189 50.000 0.00 0.00 32.06 2.77
195 196 2.806745 CGAGAGTTGAGACCAAGCCAAA 60.807 50.000 0.00 0.00 32.06 3.28
196 197 1.270305 CGAGAGTTGAGACCAAGCCAA 60.270 52.381 0.00 0.00 32.06 4.52
197 198 0.318441 CGAGAGTTGAGACCAAGCCA 59.682 55.000 0.00 0.00 32.06 4.75
198 199 0.603569 TCGAGAGTTGAGACCAAGCC 59.396 55.000 0.00 0.00 32.06 4.35
199 200 1.704070 GTCGAGAGTTGAGACCAAGC 58.296 55.000 0.00 0.00 32.06 4.01
200 201 1.535896 TCGTCGAGAGTTGAGACCAAG 59.464 52.381 0.00 0.00 32.06 3.61
201 202 1.535896 CTCGTCGAGAGTTGAGACCAA 59.464 52.381 17.52 0.00 41.99 3.67
202 203 1.157585 CTCGTCGAGAGTTGAGACCA 58.842 55.000 17.52 0.00 41.99 4.02
203 204 3.980136 CTCGTCGAGAGTTGAGACC 57.020 57.895 17.52 0.00 41.99 3.85
218 219 2.257371 TCGAAGACAACGGGCTCG 59.743 61.111 3.27 3.27 43.02 5.03
229 230 1.213013 GGCGAGCTGAAGTCGAAGA 59.787 57.895 0.00 0.00 39.92 2.87
230 231 2.155194 CGGCGAGCTGAAGTCGAAG 61.155 63.158 0.00 0.00 39.92 3.79
231 232 2.126463 CGGCGAGCTGAAGTCGAA 60.126 61.111 0.00 0.00 39.92 3.71
232 233 3.362797 ACGGCGAGCTGAAGTCGA 61.363 61.111 16.62 0.00 39.92 4.20
233 234 3.175240 CACGGCGAGCTGAAGTCG 61.175 66.667 16.62 0.00 40.50 4.18
234 235 3.482783 GCACGGCGAGCTGAAGTC 61.483 66.667 21.85 0.00 0.00 3.01
245 246 4.279043 AAGGCAAAACCGCACGGC 62.279 61.111 9.43 0.00 46.52 5.68
246 247 2.354539 CAAGGCAAAACCGCACGG 60.355 61.111 7.71 7.71 46.52 4.94
247 248 2.354539 CCAAGGCAAAACCGCACG 60.355 61.111 0.00 0.00 46.52 5.34
248 249 1.007387 CTCCAAGGCAAAACCGCAC 60.007 57.895 0.00 0.00 46.52 5.34
249 250 2.199652 CCTCCAAGGCAAAACCGCA 61.200 57.895 0.00 0.00 46.52 5.69
250 251 1.250840 ATCCTCCAAGGCAAAACCGC 61.251 55.000 0.00 0.00 46.52 5.68
251 252 0.811281 GATCCTCCAAGGCAAAACCG 59.189 55.000 0.00 0.00 46.52 4.44
252 253 0.811281 CGATCCTCCAAGGCAAAACC 59.189 55.000 0.00 0.00 34.61 3.27
253 254 1.468914 GTCGATCCTCCAAGGCAAAAC 59.531 52.381 0.00 0.00 34.61 2.43
254 255 1.821216 GTCGATCCTCCAAGGCAAAA 58.179 50.000 0.00 0.00 34.61 2.44
255 256 0.391130 CGTCGATCCTCCAAGGCAAA 60.391 55.000 0.00 0.00 34.61 3.68
256 257 1.218047 CGTCGATCCTCCAAGGCAA 59.782 57.895 0.00 0.00 34.61 4.52
257 258 2.721167 CCGTCGATCCTCCAAGGCA 61.721 63.158 0.00 0.00 34.61 4.75
258 259 2.107141 CCGTCGATCCTCCAAGGC 59.893 66.667 0.00 0.00 34.61 4.35
259 260 1.141881 CACCGTCGATCCTCCAAGG 59.858 63.158 0.00 0.00 36.46 3.61
260 261 1.141881 CCACCGTCGATCCTCCAAG 59.858 63.158 0.00 0.00 0.00 3.61
261 262 2.355986 CCCACCGTCGATCCTCCAA 61.356 63.158 0.00 0.00 0.00 3.53
262 263 2.758327 CCCACCGTCGATCCTCCA 60.758 66.667 0.00 0.00 0.00 3.86
263 264 3.537874 CCCCACCGTCGATCCTCC 61.538 72.222 0.00 0.00 0.00 4.30
264 265 2.758737 ACCCCACCGTCGATCCTC 60.759 66.667 0.00 0.00 0.00 3.71
265 266 2.758737 GACCCCACCGTCGATCCT 60.759 66.667 0.00 0.00 0.00 3.24
266 267 3.846430 GGACCCCACCGTCGATCC 61.846 72.222 0.00 0.00 33.30 3.36
267 268 3.072468 TGGACCCCACCGTCGATC 61.072 66.667 0.00 0.00 33.30 3.69
299 300 4.961511 TGGTCGACTGTGCCGTGC 62.962 66.667 16.46 0.00 0.00 5.34
300 301 3.036084 GTGGTCGACTGTGCCGTG 61.036 66.667 16.46 0.00 0.00 4.94
301 302 4.640855 CGTGGTCGACTGTGCCGT 62.641 66.667 16.46 0.00 39.71 5.68
302 303 4.337060 TCGTGGTCGACTGTGCCG 62.337 66.667 16.46 10.45 41.35 5.69
303 304 2.430921 CTCGTGGTCGACTGTGCC 60.431 66.667 16.46 0.00 41.35 5.01
304 305 1.442857 CTCTCGTGGTCGACTGTGC 60.443 63.158 16.46 0.00 41.35 4.57
305 306 0.167033 CTCTCTCGTGGTCGACTGTG 59.833 60.000 16.46 5.35 41.35 3.66
306 307 0.250381 ACTCTCTCGTGGTCGACTGT 60.250 55.000 16.46 0.00 41.35 3.55
307 308 0.875728 AACTCTCTCGTGGTCGACTG 59.124 55.000 16.46 6.10 41.35 3.51
308 309 2.469274 TAACTCTCTCGTGGTCGACT 57.531 50.000 16.46 0.00 41.35 4.18
309 310 2.031930 GGATAACTCTCTCGTGGTCGAC 59.968 54.545 7.13 7.13 41.35 4.20
310 311 2.286872 GGATAACTCTCTCGTGGTCGA 58.713 52.381 0.00 0.00 44.12 4.20
311 312 1.334243 GGGATAACTCTCTCGTGGTCG 59.666 57.143 0.00 0.00 38.55 4.79
312 313 2.657143 AGGGATAACTCTCTCGTGGTC 58.343 52.381 0.00 0.00 0.00 4.02
313 314 2.830651 AGGGATAACTCTCTCGTGGT 57.169 50.000 0.00 0.00 0.00 4.16
314 315 4.216687 GTGATAGGGATAACTCTCTCGTGG 59.783 50.000 0.00 0.00 33.07 4.94
315 316 4.216687 GGTGATAGGGATAACTCTCTCGTG 59.783 50.000 0.00 0.00 33.07 4.35
316 317 4.141228 TGGTGATAGGGATAACTCTCTCGT 60.141 45.833 0.00 0.00 33.07 4.18
317 318 4.399219 TGGTGATAGGGATAACTCTCTCG 58.601 47.826 0.00 0.00 33.07 4.04
318 319 4.219725 GCTGGTGATAGGGATAACTCTCTC 59.780 50.000 0.00 0.00 33.07 3.20
319 320 4.156477 GCTGGTGATAGGGATAACTCTCT 58.844 47.826 0.00 0.00 35.87 3.10
320 321 3.898123 TGCTGGTGATAGGGATAACTCTC 59.102 47.826 0.00 0.00 0.00 3.20
321 322 3.928754 TGCTGGTGATAGGGATAACTCT 58.071 45.455 0.00 0.00 0.00 3.24
322 323 4.689612 TTGCTGGTGATAGGGATAACTC 57.310 45.455 0.00 0.00 0.00 3.01
323 324 5.450818 TTTTGCTGGTGATAGGGATAACT 57.549 39.130 0.00 0.00 0.00 2.24
352 353 9.921637 GGTGATTTTAGTATCATTTTTGTTGGA 57.078 29.630 0.00 0.00 36.94 3.53
353 354 9.927668 AGGTGATTTTAGTATCATTTTTGTTGG 57.072 29.630 0.00 0.00 36.94 3.77
360 361 8.893727 GCAGTACAGGTGATTTTAGTATCATTT 58.106 33.333 0.00 0.00 36.94 2.32
361 362 8.046708 TGCAGTACAGGTGATTTTAGTATCATT 58.953 33.333 0.00 0.00 36.94 2.57
362 363 7.564793 TGCAGTACAGGTGATTTTAGTATCAT 58.435 34.615 0.00 0.00 36.94 2.45
363 364 6.941857 TGCAGTACAGGTGATTTTAGTATCA 58.058 36.000 0.00 0.00 32.29 2.15
364 365 7.843490 TTGCAGTACAGGTGATTTTAGTATC 57.157 36.000 0.00 0.00 0.00 2.24
365 366 7.883311 ACTTTGCAGTACAGGTGATTTTAGTAT 59.117 33.333 0.00 0.00 0.00 2.12
366 367 7.221450 ACTTTGCAGTACAGGTGATTTTAGTA 58.779 34.615 0.00 0.00 0.00 1.82
367 368 6.062095 ACTTTGCAGTACAGGTGATTTTAGT 58.938 36.000 0.00 0.00 0.00 2.24
368 369 6.204688 TGACTTTGCAGTACAGGTGATTTTAG 59.795 38.462 0.00 0.00 31.22 1.85
369 370 6.058833 TGACTTTGCAGTACAGGTGATTTTA 58.941 36.000 0.00 0.00 31.22 1.52
370 371 4.887071 TGACTTTGCAGTACAGGTGATTTT 59.113 37.500 0.00 0.00 31.22 1.82
371 372 4.460263 TGACTTTGCAGTACAGGTGATTT 58.540 39.130 0.00 0.00 31.22 2.17
372 373 4.085357 TGACTTTGCAGTACAGGTGATT 57.915 40.909 0.00 0.00 31.22 2.57
373 374 3.769739 TGACTTTGCAGTACAGGTGAT 57.230 42.857 0.00 0.00 31.22 3.06
374 375 3.181455 ACATGACTTTGCAGTACAGGTGA 60.181 43.478 0.00 0.00 31.22 4.02
375 376 3.141398 ACATGACTTTGCAGTACAGGTG 58.859 45.455 0.00 0.00 31.22 4.00
376 377 3.492102 ACATGACTTTGCAGTACAGGT 57.508 42.857 0.00 0.00 31.22 4.00
377 378 6.500684 AAATACATGACTTTGCAGTACAGG 57.499 37.500 0.00 0.00 31.22 4.00
380 381 9.503427 GGAATAAAATACATGACTTTGCAGTAC 57.497 33.333 0.00 0.00 31.22 2.73
381 382 8.682710 GGGAATAAAATACATGACTTTGCAGTA 58.317 33.333 0.00 0.00 31.22 2.74
382 383 7.178274 TGGGAATAAAATACATGACTTTGCAGT 59.822 33.333 0.00 0.00 35.17 4.40
383 384 7.546358 TGGGAATAAAATACATGACTTTGCAG 58.454 34.615 0.00 0.00 0.00 4.41
384 385 7.473735 TGGGAATAAAATACATGACTTTGCA 57.526 32.000 0.00 0.00 0.00 4.08
385 386 7.653311 GGATGGGAATAAAATACATGACTTTGC 59.347 37.037 0.00 0.00 0.00 3.68
386 387 8.917088 AGGATGGGAATAAAATACATGACTTTG 58.083 33.333 0.00 0.00 0.00 2.77
387 388 8.917088 CAGGATGGGAATAAAATACATGACTTT 58.083 33.333 0.00 0.00 0.00 2.66
388 389 8.281531 TCAGGATGGGAATAAAATACATGACTT 58.718 33.333 0.00 0.00 36.16 3.01
389 390 7.815383 TCAGGATGGGAATAAAATACATGACT 58.185 34.615 0.00 0.00 36.16 3.41
390 391 8.641498 ATCAGGATGGGAATAAAATACATGAC 57.359 34.615 0.00 0.00 36.16 3.06
391 392 9.659135 AAATCAGGATGGGAATAAAATACATGA 57.341 29.630 0.00 0.00 36.16 3.07
394 395 8.203485 GCAAAATCAGGATGGGAATAAAATACA 58.797 33.333 0.00 0.00 36.16 2.29
395 396 8.203485 TGCAAAATCAGGATGGGAATAAAATAC 58.797 33.333 0.00 0.00 36.16 1.89
396 397 8.316497 TGCAAAATCAGGATGGGAATAAAATA 57.684 30.769 0.00 0.00 36.16 1.40
397 398 7.197901 TGCAAAATCAGGATGGGAATAAAAT 57.802 32.000 0.00 0.00 36.16 1.82
398 399 6.617782 TGCAAAATCAGGATGGGAATAAAA 57.382 33.333 0.00 0.00 36.16 1.52
399 400 6.440010 TCTTGCAAAATCAGGATGGGAATAAA 59.560 34.615 0.00 0.00 36.16 1.40
400 401 5.957168 TCTTGCAAAATCAGGATGGGAATAA 59.043 36.000 0.00 0.00 36.16 1.40
401 402 5.517924 TCTTGCAAAATCAGGATGGGAATA 58.482 37.500 0.00 0.00 36.16 1.75
402 403 4.355549 TCTTGCAAAATCAGGATGGGAAT 58.644 39.130 0.00 0.00 36.16 3.01
403 404 3.765511 CTCTTGCAAAATCAGGATGGGAA 59.234 43.478 0.00 0.00 36.16 3.97
404 405 3.010472 TCTCTTGCAAAATCAGGATGGGA 59.990 43.478 0.00 0.00 36.16 4.37
405 406 3.359033 TCTCTTGCAAAATCAGGATGGG 58.641 45.455 0.00 0.00 36.16 4.00
406 407 4.703575 TCTTCTCTTGCAAAATCAGGATGG 59.296 41.667 0.00 0.00 36.16 3.51
407 408 5.892160 TCTTCTCTTGCAAAATCAGGATG 57.108 39.130 0.00 0.00 37.54 3.51
408 409 6.662234 TGAATCTTCTCTTGCAAAATCAGGAT 59.338 34.615 0.00 0.00 0.00 3.24
409 410 6.005823 TGAATCTTCTCTTGCAAAATCAGGA 58.994 36.000 0.00 0.00 0.00 3.86
410 411 6.263516 TGAATCTTCTCTTGCAAAATCAGG 57.736 37.500 0.00 0.00 0.00 3.86
411 412 8.485591 GTTTTGAATCTTCTCTTGCAAAATCAG 58.514 33.333 0.00 0.00 37.49 2.90
412 413 7.980662 TGTTTTGAATCTTCTCTTGCAAAATCA 59.019 29.630 0.00 0.00 37.49 2.57
413 414 8.271487 GTGTTTTGAATCTTCTCTTGCAAAATC 58.729 33.333 0.00 0.00 37.49 2.17
414 415 7.225341 GGTGTTTTGAATCTTCTCTTGCAAAAT 59.775 33.333 0.00 0.00 37.49 1.82
415 416 6.534793 GGTGTTTTGAATCTTCTCTTGCAAAA 59.465 34.615 0.00 0.00 34.15 2.44
416 417 6.042143 GGTGTTTTGAATCTTCTCTTGCAAA 58.958 36.000 0.00 0.00 0.00 3.68
417 418 5.126869 TGGTGTTTTGAATCTTCTCTTGCAA 59.873 36.000 0.00 0.00 0.00 4.08
418 419 4.644234 TGGTGTTTTGAATCTTCTCTTGCA 59.356 37.500 0.00 0.00 0.00 4.08
419 420 5.186996 TGGTGTTTTGAATCTTCTCTTGC 57.813 39.130 0.00 0.00 0.00 4.01
420 421 8.327941 TCTATGGTGTTTTGAATCTTCTCTTG 57.672 34.615 0.00 0.00 0.00 3.02
421 422 8.924511 TTCTATGGTGTTTTGAATCTTCTCTT 57.075 30.769 0.00 0.00 0.00 2.85
422 423 8.378565 TCTTCTATGGTGTTTTGAATCTTCTCT 58.621 33.333 0.00 0.00 0.00 3.10
423 424 8.553459 TCTTCTATGGTGTTTTGAATCTTCTC 57.447 34.615 0.00 0.00 0.00 2.87
424 425 8.954350 CATCTTCTATGGTGTTTTGAATCTTCT 58.046 33.333 0.00 0.00 0.00 2.85
425 426 8.950210 TCATCTTCTATGGTGTTTTGAATCTTC 58.050 33.333 0.00 0.00 0.00 2.87
426 427 8.868522 TCATCTTCTATGGTGTTTTGAATCTT 57.131 30.769 0.00 0.00 0.00 2.40
427 428 8.900781 CATCATCTTCTATGGTGTTTTGAATCT 58.099 33.333 0.00 0.00 0.00 2.40
428 429 8.680903 ACATCATCTTCTATGGTGTTTTGAATC 58.319 33.333 0.00 0.00 40.14 2.52
429 430 8.585471 ACATCATCTTCTATGGTGTTTTGAAT 57.415 30.769 0.00 0.00 40.14 2.57
430 431 8.946085 GTACATCATCTTCTATGGTGTTTTGAA 58.054 33.333 9.01 0.00 40.14 2.69
431 432 8.321353 AGTACATCATCTTCTATGGTGTTTTGA 58.679 33.333 9.01 0.00 40.14 2.69
432 433 8.498054 AGTACATCATCTTCTATGGTGTTTTG 57.502 34.615 9.01 0.00 40.14 2.44
433 434 9.167311 GAAGTACATCATCTTCTATGGTGTTTT 57.833 33.333 9.01 5.24 40.14 2.43
434 435 8.543774 AGAAGTACATCATCTTCTATGGTGTTT 58.456 33.333 9.01 0.00 45.43 2.83
435 436 8.083828 AGAAGTACATCATCTTCTATGGTGTT 57.916 34.615 9.01 0.00 45.43 3.32
436 437 7.667575 AGAAGTACATCATCTTCTATGGTGT 57.332 36.000 8.76 8.76 45.43 4.16
442 443 7.226918 CGTCCTGTAGAAGTACATCATCTTCTA 59.773 40.741 9.60 9.60 45.43 2.10
444 445 6.038382 TCGTCCTGTAGAAGTACATCATCTTC 59.962 42.308 0.31 0.00 38.51 2.87
445 446 5.886474 TCGTCCTGTAGAAGTACATCATCTT 59.114 40.000 0.31 0.00 38.51 2.40
446 447 5.437946 TCGTCCTGTAGAAGTACATCATCT 58.562 41.667 0.31 0.00 38.51 2.90
447 448 5.297278 ACTCGTCCTGTAGAAGTACATCATC 59.703 44.000 0.31 0.00 38.51 2.92
448 449 5.194432 ACTCGTCCTGTAGAAGTACATCAT 58.806 41.667 0.31 0.00 38.51 2.45
449 450 4.586884 ACTCGTCCTGTAGAAGTACATCA 58.413 43.478 0.31 0.00 38.51 3.07
450 451 6.674694 TTACTCGTCCTGTAGAAGTACATC 57.325 41.667 0.00 0.00 38.51 3.06
451 452 7.466996 CGATTTACTCGTCCTGTAGAAGTACAT 60.467 40.741 0.00 0.00 42.56 2.29
452 453 6.183360 CGATTTACTCGTCCTGTAGAAGTACA 60.183 42.308 0.00 0.00 42.56 2.90
453 454 6.190962 CGATTTACTCGTCCTGTAGAAGTAC 58.809 44.000 0.00 0.00 42.56 2.73
454 455 5.295292 CCGATTTACTCGTCCTGTAGAAGTA 59.705 44.000 0.00 0.00 46.18 2.24
455 456 4.096081 CCGATTTACTCGTCCTGTAGAAGT 59.904 45.833 0.00 0.00 46.18 3.01
456 457 4.334759 TCCGATTTACTCGTCCTGTAGAAG 59.665 45.833 0.00 0.00 46.18 2.85
457 458 4.264253 TCCGATTTACTCGTCCTGTAGAA 58.736 43.478 0.00 0.00 46.18 2.10
458 459 3.877559 TCCGATTTACTCGTCCTGTAGA 58.122 45.455 0.00 0.00 46.18 2.59
459 460 4.349501 GTTCCGATTTACTCGTCCTGTAG 58.650 47.826 0.00 0.00 46.18 2.74
460 461 3.181507 CGTTCCGATTTACTCGTCCTGTA 60.182 47.826 0.00 0.00 46.18 2.74
461 462 2.415090 CGTTCCGATTTACTCGTCCTGT 60.415 50.000 0.00 0.00 46.18 4.00
462 463 2.182825 CGTTCCGATTTACTCGTCCTG 58.817 52.381 0.00 0.00 46.18 3.86
463 464 1.133790 CCGTTCCGATTTACTCGTCCT 59.866 52.381 0.00 0.00 46.18 3.85
464 465 1.133025 TCCGTTCCGATTTACTCGTCC 59.867 52.381 0.00 0.00 46.18 4.79
465 466 2.448219 CTCCGTTCCGATTTACTCGTC 58.552 52.381 0.00 0.00 46.18 4.20
466 467 1.133790 CCTCCGTTCCGATTTACTCGT 59.866 52.381 0.00 0.00 46.18 4.18
468 469 1.753073 TCCCTCCGTTCCGATTTACTC 59.247 52.381 0.00 0.00 0.00 2.59
469 470 1.755380 CTCCCTCCGTTCCGATTTACT 59.245 52.381 0.00 0.00 0.00 2.24
470 471 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
471 472 1.856629 ACTCCCTCCGTTCCGATTTA 58.143 50.000 0.00 0.00 0.00 1.40
472 473 1.479730 GTACTCCCTCCGTTCCGATTT 59.520 52.381 0.00 0.00 0.00 2.17
473 474 1.109609 GTACTCCCTCCGTTCCGATT 58.890 55.000 0.00 0.00 0.00 3.34
474 475 0.754587 GGTACTCCCTCCGTTCCGAT 60.755 60.000 0.00 0.00 0.00 4.18
475 476 1.379044 GGTACTCCCTCCGTTCCGA 60.379 63.158 0.00 0.00 0.00 4.55
476 477 2.768492 CGGTACTCCCTCCGTTCCG 61.768 68.421 0.00 0.00 41.58 4.30
477 478 2.421399 CCGGTACTCCCTCCGTTCC 61.421 68.421 0.00 0.00 44.51 3.62
478 479 3.073742 GCCGGTACTCCCTCCGTTC 62.074 68.421 1.90 0.00 44.51 3.95
479 480 3.073101 GCCGGTACTCCCTCCGTT 61.073 66.667 1.90 0.00 44.51 4.44
482 483 3.525545 GTCGCCGGTACTCCCTCC 61.526 72.222 1.90 0.00 0.00 4.30
483 484 3.885521 CGTCGCCGGTACTCCCTC 61.886 72.222 1.90 0.00 0.00 4.30
484 485 4.729918 ACGTCGCCGGTACTCCCT 62.730 66.667 1.90 0.00 38.78 4.20
485 486 4.487412 CACGTCGCCGGTACTCCC 62.487 72.222 1.90 0.00 38.78 4.30
486 487 4.487412 CCACGTCGCCGGTACTCC 62.487 72.222 1.90 0.00 38.78 3.85
502 503 2.904866 TGGAGCGTGTGTTTGGCC 60.905 61.111 0.00 0.00 0.00 5.36
505 506 1.433053 TTCCGTGGAGCGTGTGTTTG 61.433 55.000 0.00 0.00 39.32 2.93
506 507 1.153329 TTCCGTGGAGCGTGTGTTT 60.153 52.632 0.00 0.00 39.32 2.83
509 510 2.279851 TGTTCCGTGGAGCGTGTG 60.280 61.111 0.00 0.00 39.32 3.82
567 568 2.203294 GGTGACCGTTGGCTTGGT 60.203 61.111 0.00 0.00 42.42 3.67
636 640 4.722535 AGAAGGCGGCTGGAGGGA 62.723 66.667 14.21 0.00 0.00 4.20
637 641 3.689002 GAAGAAGGCGGCTGGAGGG 62.689 68.421 14.21 0.00 0.00 4.30
638 642 2.124942 GAAGAAGGCGGCTGGAGG 60.125 66.667 14.21 0.00 0.00 4.30
639 643 2.124942 GGAAGAAGGCGGCTGGAG 60.125 66.667 14.21 0.00 0.00 3.86
640 644 2.927856 TGGAAGAAGGCGGCTGGA 60.928 61.111 14.21 0.00 0.00 3.86
657 661 1.599047 CAGAGGCGAAGGATGGTGT 59.401 57.895 0.00 0.00 0.00 4.16
929 949 4.820716 GGATGCTTGAGCTTGACTGATTAT 59.179 41.667 4.44 0.00 42.66 1.28
963 1392 3.476740 GATGGACGCCTTCAATCCA 57.523 52.632 0.00 0.00 46.36 3.41
975 1404 2.844839 CCTCCCTCCCGGATGGAC 60.845 72.222 0.73 0.00 41.00 4.02
994 1423 2.035626 CACGAACCCCATTGCCCT 59.964 61.111 0.00 0.00 0.00 5.19
995 1424 3.758931 GCACGAACCCCATTGCCC 61.759 66.667 0.00 0.00 0.00 5.36
996 1425 2.676471 AGCACGAACCCCATTGCC 60.676 61.111 0.00 0.00 35.47 4.52
997 1426 2.568090 CAGCACGAACCCCATTGC 59.432 61.111 0.00 0.00 35.08 3.56
998 1427 1.603455 ACCAGCACGAACCCCATTG 60.603 57.895 0.00 0.00 0.00 2.82
1116 1545 2.109181 GTGCCGTAGATCTGGGCC 59.891 66.667 27.25 18.45 46.31 5.80
1185 1614 1.003233 GCCTTCCTTCTTCAGCGGT 60.003 57.895 0.00 0.00 0.00 5.68
1189 1618 1.078143 CGGGGCCTTCCTTCTTCAG 60.078 63.158 0.84 0.00 35.33 3.02
1230 1665 0.762461 CCAGCTAAGGAGGAGGAGGG 60.762 65.000 0.00 0.00 0.00 4.30
1243 1678 0.602638 CAACACCAACGCTCCAGCTA 60.603 55.000 0.00 0.00 39.32 3.32
1244 1679 1.893808 CAACACCAACGCTCCAGCT 60.894 57.895 0.00 0.00 39.32 4.24
1325 1788 1.705186 ACCACCCTTCACAGTAAGCAT 59.295 47.619 0.00 0.00 0.00 3.79
1328 1791 3.485463 TCAACCACCCTTCACAGTAAG 57.515 47.619 0.00 0.00 0.00 2.34
1341 1804 1.086696 CATCACACCGGATCAACCAC 58.913 55.000 9.46 0.00 38.90 4.16
1342 1805 0.980423 TCATCACACCGGATCAACCA 59.020 50.000 9.46 0.00 38.90 3.67
1381 1853 3.311966 TCGATTTGCGCATCTCATAGAG 58.688 45.455 12.75 0.00 40.61 2.43
1471 1948 1.242076 GCAAGCCTGAGAAAGCAAGA 58.758 50.000 0.00 0.00 0.00 3.02
1472 1949 0.109873 CGCAAGCCTGAGAAAGCAAG 60.110 55.000 0.00 0.00 0.00 4.01
1499 1976 3.486383 TCAGAAACCCAATTCCACTCAC 58.514 45.455 0.00 0.00 0.00 3.51
1530 2007 2.289820 GACTTTTGACACCCGAAACTCC 59.710 50.000 0.00 0.00 0.00 3.85
1538 2015 3.518634 TTTGCTTGACTTTTGACACCC 57.481 42.857 0.00 0.00 0.00 4.61
1624 2103 2.159448 CGCCTTGCATCGAAAACCATTA 60.159 45.455 0.00 0.00 0.00 1.90
1652 2144 0.668401 GCAAGTGCCAGATTTGGTGC 60.668 55.000 3.90 2.08 46.80 5.01
1661 2153 0.309922 CAGTGAGTTGCAAGTGCCAG 59.690 55.000 12.53 0.00 41.18 4.85
1711 2206 3.281727 TCCATCACCTGGTGCTATTTC 57.718 47.619 22.02 0.00 46.08 2.17
1813 2338 6.094061 AGTTCTGCACGTTACTATCTTCTTC 58.906 40.000 0.00 0.00 0.00 2.87
1822 2347 7.265673 ACATTGATATAGTTCTGCACGTTACT 58.734 34.615 0.00 0.00 0.00 2.24
1824 2349 9.191995 CATACATTGATATAGTTCTGCACGTTA 57.808 33.333 0.00 0.00 0.00 3.18
1825 2350 7.926018 TCATACATTGATATAGTTCTGCACGTT 59.074 33.333 0.00 0.00 0.00 3.99
1828 2353 8.090831 TCCTCATACATTGATATAGTTCTGCAC 58.909 37.037 0.00 0.00 32.72 4.57
1829 2354 8.193953 TCCTCATACATTGATATAGTTCTGCA 57.806 34.615 0.00 0.00 32.72 4.41
1851 2376 3.173953 TGTTTGCCTCCATTTGATCCT 57.826 42.857 0.00 0.00 0.00 3.24
1852 2377 5.537674 AGATATGTTTGCCTCCATTTGATCC 59.462 40.000 0.00 0.00 0.00 3.36
1853 2378 6.645790 AGATATGTTTGCCTCCATTTGATC 57.354 37.500 0.00 0.00 0.00 2.92
1858 2383 6.840705 ACCATAAAGATATGTTTGCCTCCATT 59.159 34.615 8.05 0.00 37.75 3.16
1859 2384 6.376248 ACCATAAAGATATGTTTGCCTCCAT 58.624 36.000 8.05 0.00 37.75 3.41
1861 2386 7.817418 TTACCATAAAGATATGTTTGCCTCC 57.183 36.000 8.05 0.00 37.75 4.30
1862 2387 9.683069 CAATTACCATAAAGATATGTTTGCCTC 57.317 33.333 8.05 0.00 37.75 4.70
1903 2577 6.962678 GCAAAATCAAAATATGTGCAATCACC 59.037 34.615 0.00 0.00 42.46 4.02
1937 2611 5.392767 TTTTTGTTTGTGCTTGTACCAGA 57.607 34.783 0.00 0.00 0.00 3.86
1938 2612 5.809562 TGATTTTTGTTTGTGCTTGTACCAG 59.190 36.000 0.00 0.00 0.00 4.00
1939 2613 5.724328 TGATTTTTGTTTGTGCTTGTACCA 58.276 33.333 0.00 0.00 0.00 3.25
1940 2614 6.091441 TGTTGATTTTTGTTTGTGCTTGTACC 59.909 34.615 0.00 0.00 0.00 3.34
1941 2615 6.953189 GTGTTGATTTTTGTTTGTGCTTGTAC 59.047 34.615 0.00 0.00 0.00 2.90
1942 2616 6.646653 TGTGTTGATTTTTGTTTGTGCTTGTA 59.353 30.769 0.00 0.00 0.00 2.41
1960 2634 2.093890 GTGCCCATGATGATGTGTTGA 58.906 47.619 0.00 0.00 0.00 3.18
1977 2652 7.594758 TGCTGTAATTAAAAAGATGAACTGTGC 59.405 33.333 0.00 0.00 0.00 4.57
2002 2702 5.345702 CATTCCACCATAGATTTGCACTTG 58.654 41.667 0.00 0.00 0.00 3.16
2053 2779 4.326504 AGGAAATTGCAAACCAAGACAG 57.673 40.909 18.22 0.00 36.76 3.51
2078 2813 1.807886 CTTCAGATGCAAGCCTGGC 59.192 57.895 11.65 11.65 0.00 4.85
2079 2814 0.680280 AGCTTCAGATGCAAGCCTGG 60.680 55.000 10.74 0.00 46.41 4.45
2112 2847 6.677781 TTACACCTGAAAACTCTTGACAAG 57.322 37.500 9.03 9.03 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.