Multiple sequence alignment - TraesCS5A01G413200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G413200 chr5A 100.000 6824 0 0 983 7806 601618965 601612142 0.000000e+00 12602.0
1 TraesCS5A01G413200 chr5A 100.000 601 0 0 1 601 601619947 601619347 0.000000e+00 1110.0
2 TraesCS5A01G413200 chr5A 95.000 60 3 0 5551 5610 601541450 601541391 2.320000e-15 95.3
3 TraesCS5A01G413200 chr5A 91.667 60 5 0 5551 5610 601533741 601533682 5.020000e-12 84.2
4 TraesCS5A01G413200 chr5A 97.674 43 1 0 5539 5581 601533643 601533601 3.020000e-09 75.0
5 TraesCS5A01G413200 chr5A 97.674 43 1 0 5539 5581 601541352 601541310 3.020000e-09 75.0
6 TraesCS5A01G413200 chr5B 94.584 2862 113 19 3618 6464 591193895 591191061 0.000000e+00 4388.0
7 TraesCS5A01G413200 chr5B 91.712 1484 91 10 983 2457 591195855 591194395 0.000000e+00 2030.0
8 TraesCS5A01G413200 chr5B 89.976 1267 69 21 6567 7806 591191063 591189828 0.000000e+00 1583.0
9 TraesCS5A01G413200 chr5B 85.020 741 92 12 5580 6312 591177576 591176847 0.000000e+00 736.0
10 TraesCS5A01G413200 chr5B 95.385 325 7 5 284 601 591196556 591196233 1.940000e-140 510.0
11 TraesCS5A01G413200 chr5B 88.158 380 38 5 3226 3603 591194358 591193984 5.560000e-121 446.0
12 TraesCS5A01G413200 chr5B 90.763 249 21 2 303 550 591239645 591239398 1.620000e-86 331.0
13 TraesCS5A01G413200 chr5B 87.586 290 26 6 983 1271 591239021 591238741 2.100000e-85 327.0
14 TraesCS5A01G413200 chr5B 91.852 135 5 6 6459 6590 13181437 13181568 4.810000e-42 183.0
15 TraesCS5A01G413200 chr5B 87.387 111 13 1 102 211 245357729 245357839 8.220000e-25 126.0
16 TraesCS5A01G413200 chr5B 86.441 59 5 3 23 79 56593725 56593668 2.350000e-05 62.1
17 TraesCS5A01G413200 chr5D 96.352 2330 76 8 3618 5947 481987184 481984864 0.000000e+00 3823.0
18 TraesCS5A01G413200 chr5D 91.806 1611 98 12 983 2579 481989863 481988273 0.000000e+00 2213.0
19 TraesCS5A01G413200 chr5D 89.005 955 66 13 5539 6464 481979733 481978789 0.000000e+00 1146.0
20 TraesCS5A01G413200 chr5D 85.078 1032 107 23 2624 3621 481988273 481987255 0.000000e+00 1009.0
21 TraesCS5A01G413200 chr5D 91.921 656 48 4 5810 6464 481959145 481958494 0.000000e+00 913.0
22 TraesCS5A01G413200 chr5D 93.464 459 26 4 6009 6464 481984835 481984378 0.000000e+00 678.0
23 TraesCS5A01G413200 chr5D 88.578 464 44 6 6567 7022 481958496 481958034 8.850000e-154 555.0
24 TraesCS5A01G413200 chr5D 93.443 366 24 0 6630 6995 481984064 481983699 1.920000e-150 544.0
25 TraesCS5A01G413200 chr5D 91.799 378 23 7 224 596 481990540 481990166 3.230000e-143 520.0
26 TraesCS5A01G413200 chr5D 86.551 461 54 6 6567 7022 481978791 481978334 1.170000e-137 501.0
27 TraesCS5A01G413200 chr5D 87.105 411 34 5 5328 5738 481971555 481971164 1.550000e-121 448.0
28 TraesCS5A01G413200 chr5D 91.379 232 11 5 7280 7510 481983609 481983386 7.610000e-80 309.0
29 TraesCS5A01G413200 chr5D 85.467 289 26 5 7526 7806 481983412 481983132 3.560000e-73 287.0
30 TraesCS5A01G413200 chr5D 95.082 122 5 1 6452 6573 231640493 231640373 2.870000e-44 191.0
31 TraesCS5A01G413200 chr5D 95.455 66 3 0 6567 6632 481984380 481984315 1.070000e-18 106.0
32 TraesCS5A01G413200 chr5D 88.095 84 2 2 5730 5813 481970927 481970852 8.340000e-15 93.5
33 TraesCS5A01G413200 chr5D 94.643 56 3 0 5551 5606 481979831 481979776 3.880000e-13 87.9
34 TraesCS5A01G413200 chr5D 87.097 62 6 2 44 104 480977567 480977507 1.410000e-07 69.4
35 TraesCS5A01G413200 chr7A 94.531 128 5 2 6463 6589 513215586 513215712 6.180000e-46 196.0
36 TraesCS5A01G413200 chr7A 97.391 115 3 0 6455 6569 609518894 609519008 6.180000e-46 196.0
37 TraesCS5A01G413200 chr7A 88.288 111 13 0 99 209 635696438 635696548 4.910000e-27 134.0
38 TraesCS5A01G413200 chr4B 96.581 117 4 0 6458 6574 130377326 130377442 2.220000e-45 195.0
39 TraesCS5A01G413200 chr4B 94.444 126 7 0 6444 6569 191365466 191365341 2.220000e-45 195.0
40 TraesCS5A01G413200 chr1B 96.581 117 4 0 6455 6571 637810937 637810821 2.220000e-45 195.0
41 TraesCS5A01G413200 chr4A 95.798 119 5 0 6459 6577 548344070 548344188 7.990000e-45 193.0
42 TraesCS5A01G413200 chr4A 88.073 109 13 0 101 209 599820655 599820763 6.360000e-26 130.0
43 TraesCS5A01G413200 chr4A 87.619 105 12 1 107 210 593316736 593316632 3.830000e-23 121.0
44 TraesCS5A01G413200 chr4A 80.952 147 20 5 2814 2959 450873239 450873100 8.280000e-20 110.0
45 TraesCS5A01G413200 chr1A 95.041 121 6 0 6449 6569 441238362 441238242 2.870000e-44 191.0
46 TraesCS5A01G413200 chr1A 88.889 108 12 0 101 208 557858868 557858975 4.910000e-27 134.0
47 TraesCS5A01G413200 chr2B 89.815 108 10 1 105 211 58337115 58337008 3.800000e-28 137.0
48 TraesCS5A01G413200 chr2B 87.850 107 13 0 102 208 229991628 229991734 8.220000e-25 126.0
49 TraesCS5A01G413200 chr1D 87.156 109 14 0 102 210 458310828 458310936 2.960000e-24 124.0
50 TraesCS5A01G413200 chr2A 87.619 105 13 0 105 209 735860817 735860713 1.060000e-23 122.0
51 TraesCS5A01G413200 chr4D 81.633 147 19 5 2814 2959 119899420 119899281 1.780000e-21 115.0
52 TraesCS5A01G413200 chr4D 89.831 59 6 0 44 102 483458152 483458210 8.400000e-10 76.8
53 TraesCS5A01G413200 chr3B 100.000 29 0 0 45 73 24902536 24902564 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G413200 chr5A 601612142 601619947 7805 True 6856.000 12602 100.0000 1 7806 2 chr5A.!!$R3 7805
1 TraesCS5A01G413200 chr5B 591189828 591196556 6728 True 1791.400 4388 91.9630 284 7806 5 chr5B.!!$R3 7522
2 TraesCS5A01G413200 chr5B 591176847 591177576 729 True 736.000 736 85.0200 5580 6312 1 chr5B.!!$R2 732
3 TraesCS5A01G413200 chr5B 591238741 591239645 904 True 329.000 331 89.1745 303 1271 2 chr5B.!!$R4 968
4 TraesCS5A01G413200 chr5D 481978334 481990540 12206 True 935.325 3823 91.2035 224 7806 12 chr5D.!!$R5 7582
5 TraesCS5A01G413200 chr5D 481958034 481959145 1111 True 734.000 913 90.2495 5810 7022 2 chr5D.!!$R3 1212
6 TraesCS5A01G413200 chr5D 481970852 481971555 703 True 270.750 448 87.6000 5328 5813 2 chr5D.!!$R4 485

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
220 221 0.033306 GGGAGTAGAACGGAGGGAGT 60.033 60.000 0.00 0.00 0.00 3.85 F
1661 1691 1.070786 TGGAGAAGGGTGTCGCAAC 59.929 57.895 0.00 0.00 0.00 4.17 F
1689 1719 0.034186 CAGGGAATGGGCAAGCAGTA 60.034 55.000 0.00 0.00 0.00 2.74 F
2684 2716 0.038159 AGCTACAACCGACTGCAGTC 60.038 55.000 32.73 32.73 41.47 3.51 F
2894 2928 0.112606 TCCCCTAGGCTATCGTGAGG 59.887 60.000 2.05 0.00 0.00 3.86 F
4206 4342 0.464916 ATGCAATCAGGCGATGCTCA 60.465 50.000 0.00 1.69 36.28 4.26 F
4729 4865 0.030603 ATGAGGAGGAGGGGGACTTC 60.031 60.000 0.00 0.00 35.29 3.01 F
5922 6303 0.031616 AACCAGTTCCTTGCCCCAAA 60.032 50.000 0.00 0.00 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1673 1703 0.034089 AGGTACTGCTTGCCCATTCC 60.034 55.0 0.00 0.00 37.18 3.01 R
3075 3116 0.482446 TCTGTTGAAACCAGCCCCAT 59.518 50.0 0.00 0.00 0.00 4.00 R
3345 3406 0.883833 CGGCTGCCAAGAACAAGAAT 59.116 50.0 20.29 0.00 0.00 2.40 R
3954 4090 0.034756 TGCTTCGCAGCCAGTTCTTA 59.965 50.0 4.17 0.00 46.74 2.10 R
4600 4736 0.445436 GCAACAGTGAGAAGCGATGG 59.555 55.0 0.00 0.00 0.00 3.51 R
5248 5384 1.376609 GGCAACATGGAAGGCCTACG 61.377 60.0 5.16 0.00 43.09 3.51 R
6551 6949 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R
7548 8310 0.165944 GAACGATTGGTTGCTGACGG 59.834 55.0 0.00 0.00 39.50 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.846779 TTTTCTTTCCCTTTCCACATCG 57.153 40.909 0.00 0.00 0.00 3.84
24 25 2.907696 TCTTTCCCTTTCCACATCGGTA 59.092 45.455 0.00 0.00 35.57 4.02
25 26 3.328343 TCTTTCCCTTTCCACATCGGTAA 59.672 43.478 0.00 0.00 35.57 2.85
26 27 4.018779 TCTTTCCCTTTCCACATCGGTAAT 60.019 41.667 0.00 0.00 35.57 1.89
27 28 5.190132 TCTTTCCCTTTCCACATCGGTAATA 59.810 40.000 0.00 0.00 35.57 0.98
28 29 5.438698 TTCCCTTTCCACATCGGTAATAA 57.561 39.130 0.00 0.00 35.57 1.40
29 30 5.438698 TCCCTTTCCACATCGGTAATAAA 57.561 39.130 0.00 0.00 35.57 1.40
30 31 6.008696 TCCCTTTCCACATCGGTAATAAAT 57.991 37.500 0.00 0.00 35.57 1.40
31 32 6.059484 TCCCTTTCCACATCGGTAATAAATC 58.941 40.000 0.00 0.00 35.57 2.17
32 33 5.825679 CCCTTTCCACATCGGTAATAAATCA 59.174 40.000 0.00 0.00 35.57 2.57
33 34 6.490040 CCCTTTCCACATCGGTAATAAATCAT 59.510 38.462 0.00 0.00 35.57 2.45
34 35 7.663905 CCCTTTCCACATCGGTAATAAATCATA 59.336 37.037 0.00 0.00 35.57 2.15
35 36 8.504005 CCTTTCCACATCGGTAATAAATCATAC 58.496 37.037 0.00 0.00 35.57 2.39
36 37 9.273016 CTTTCCACATCGGTAATAAATCATACT 57.727 33.333 0.00 0.00 35.57 2.12
37 38 9.621629 TTTCCACATCGGTAATAAATCATACTT 57.378 29.630 0.00 0.00 35.57 2.24
38 39 9.621629 TTCCACATCGGTAATAAATCATACTTT 57.378 29.630 0.00 0.00 35.57 2.66
39 40 9.268268 TCCACATCGGTAATAAATCATACTTTC 57.732 33.333 0.00 0.00 35.57 2.62
40 41 9.273016 CCACATCGGTAATAAATCATACTTTCT 57.727 33.333 0.00 0.00 0.00 2.52
60 61 7.971168 ACTTTCTTAGTCTCATGATGTAAGACG 59.029 37.037 15.84 13.32 43.30 4.18
61 62 7.392494 TTCTTAGTCTCATGATGTAAGACGT 57.608 36.000 15.84 0.00 43.30 4.34
62 63 7.392494 TCTTAGTCTCATGATGTAAGACGTT 57.608 36.000 13.61 0.58 43.30 3.99
63 64 7.827701 TCTTAGTCTCATGATGTAAGACGTTT 58.172 34.615 13.61 0.00 43.30 3.60
64 65 8.304596 TCTTAGTCTCATGATGTAAGACGTTTT 58.695 33.333 13.61 0.00 43.30 2.43
65 66 8.827177 TTAGTCTCATGATGTAAGACGTTTTT 57.173 30.769 8.17 0.00 43.30 1.94
128 129 7.709269 TCCCTTCGTTCTAAATTATTCATCG 57.291 36.000 0.00 0.00 0.00 3.84
129 130 6.202188 TCCCTTCGTTCTAAATTATTCATCGC 59.798 38.462 0.00 0.00 0.00 4.58
130 131 6.018262 CCCTTCGTTCTAAATTATTCATCGCA 60.018 38.462 0.00 0.00 0.00 5.10
131 132 7.065894 CCTTCGTTCTAAATTATTCATCGCAG 58.934 38.462 0.00 0.00 0.00 5.18
132 133 7.042725 CCTTCGTTCTAAATTATTCATCGCAGA 60.043 37.037 0.00 0.00 45.75 4.26
133 134 7.764695 TCGTTCTAAATTATTCATCGCAGAA 57.235 32.000 0.00 0.00 43.58 3.02
134 135 8.192068 TCGTTCTAAATTATTCATCGCAGAAA 57.808 30.769 0.00 0.00 43.58 2.52
135 136 8.826710 TCGTTCTAAATTATTCATCGCAGAAAT 58.173 29.630 0.00 0.00 43.58 2.17
136 137 8.886080 CGTTCTAAATTATTCATCGCAGAAATG 58.114 33.333 0.00 0.00 43.58 2.32
137 138 9.173939 GTTCTAAATTATTCATCGCAGAAATGG 57.826 33.333 0.00 0.00 43.58 3.16
138 139 8.675705 TCTAAATTATTCATCGCAGAAATGGA 57.324 30.769 0.00 0.00 43.58 3.41
139 140 9.288576 TCTAAATTATTCATCGCAGAAATGGAT 57.711 29.630 0.00 0.00 43.58 3.41
140 141 9.338291 CTAAATTATTCATCGCAGAAATGGATG 57.662 33.333 0.00 0.00 43.58 3.51
141 142 6.889301 ATTATTCATCGCAGAAATGGATGT 57.111 33.333 0.80 0.00 43.58 3.06
142 143 7.984422 ATTATTCATCGCAGAAATGGATGTA 57.016 32.000 0.80 0.00 43.58 2.29
143 144 7.984422 TTATTCATCGCAGAAATGGATGTAT 57.016 32.000 0.80 0.17 43.58 2.29
144 145 9.671279 ATTATTCATCGCAGAAATGGATGTATA 57.329 29.630 0.80 0.00 43.58 1.47
145 146 9.671279 TTATTCATCGCAGAAATGGATGTATAT 57.329 29.630 0.80 0.00 43.58 0.86
147 148 8.707938 TTCATCGCAGAAATGGATGTATATAG 57.292 34.615 0.80 0.00 43.58 1.31
148 149 8.066612 TCATCGCAGAAATGGATGTATATAGA 57.933 34.615 0.80 0.00 43.58 1.98
149 150 8.531146 TCATCGCAGAAATGGATGTATATAGAA 58.469 33.333 0.80 0.00 43.58 2.10
150 151 9.322773 CATCGCAGAAATGGATGTATATAGAAT 57.677 33.333 0.00 0.00 43.58 2.40
151 152 9.896645 ATCGCAGAAATGGATGTATATAGAATT 57.103 29.630 0.00 0.00 43.58 2.17
182 183 8.831715 ACATTTAGATACATTCATACATGCGA 57.168 30.769 0.00 0.00 0.00 5.10
183 184 8.712363 ACATTTAGATACATTCATACATGCGAC 58.288 33.333 0.00 0.00 0.00 5.19
184 185 8.711457 CATTTAGATACATTCATACATGCGACA 58.289 33.333 0.00 0.00 0.00 4.35
185 186 8.655651 TTTAGATACATTCATACATGCGACAA 57.344 30.769 0.00 0.00 0.00 3.18
186 187 6.775939 AGATACATTCATACATGCGACAAG 57.224 37.500 0.00 0.00 0.00 3.16
187 188 6.283694 AGATACATTCATACATGCGACAAGT 58.716 36.000 0.00 0.00 0.00 3.16
188 189 7.433680 AGATACATTCATACATGCGACAAGTA 58.566 34.615 0.00 0.00 0.00 2.24
189 190 7.926018 AGATACATTCATACATGCGACAAGTAA 59.074 33.333 0.00 0.00 0.00 2.24
190 191 6.925610 ACATTCATACATGCGACAAGTAAT 57.074 33.333 0.00 0.00 0.00 1.89
191 192 7.320443 ACATTCATACATGCGACAAGTAATT 57.680 32.000 0.00 0.00 0.00 1.40
192 193 7.409697 ACATTCATACATGCGACAAGTAATTC 58.590 34.615 0.00 0.00 0.00 2.17
193 194 5.635549 TCATACATGCGACAAGTAATTCG 57.364 39.130 0.00 0.00 38.31 3.34
194 195 4.506288 TCATACATGCGACAAGTAATTCGG 59.494 41.667 0.00 0.00 35.73 4.30
195 196 2.967362 ACATGCGACAAGTAATTCGGA 58.033 42.857 0.00 0.00 40.02 4.55
196 197 3.331150 ACATGCGACAAGTAATTCGGAA 58.669 40.909 0.00 0.00 39.13 4.30
197 198 3.749088 ACATGCGACAAGTAATTCGGAAA 59.251 39.130 0.00 0.00 39.13 3.13
198 199 4.394920 ACATGCGACAAGTAATTCGGAAAT 59.605 37.500 0.00 0.00 39.13 2.17
199 200 4.335082 TGCGACAAGTAATTCGGAAATG 57.665 40.909 0.00 0.00 35.73 2.32
200 201 3.997681 TGCGACAAGTAATTCGGAAATGA 59.002 39.130 0.00 0.00 35.73 2.57
201 202 4.092821 TGCGACAAGTAATTCGGAAATGAG 59.907 41.667 0.00 0.00 35.73 2.90
202 203 4.494199 GCGACAAGTAATTCGGAAATGAGG 60.494 45.833 0.00 0.00 35.73 3.86
203 204 4.034048 CGACAAGTAATTCGGAAATGAGGG 59.966 45.833 0.00 0.00 0.00 4.30
204 205 5.174037 ACAAGTAATTCGGAAATGAGGGA 57.826 39.130 0.00 0.00 0.00 4.20
205 206 5.186198 ACAAGTAATTCGGAAATGAGGGAG 58.814 41.667 0.00 0.00 0.00 4.30
206 207 5.186198 CAAGTAATTCGGAAATGAGGGAGT 58.814 41.667 0.00 0.00 0.00 3.85
207 208 6.070424 ACAAGTAATTCGGAAATGAGGGAGTA 60.070 38.462 0.00 0.00 0.00 2.59
208 209 6.163135 AGTAATTCGGAAATGAGGGAGTAG 57.837 41.667 0.00 0.00 0.00 2.57
209 210 5.897824 AGTAATTCGGAAATGAGGGAGTAGA 59.102 40.000 0.00 0.00 0.00 2.59
210 211 5.693769 AATTCGGAAATGAGGGAGTAGAA 57.306 39.130 0.00 0.00 0.00 2.10
211 212 4.467198 TTCGGAAATGAGGGAGTAGAAC 57.533 45.455 0.00 0.00 0.00 3.01
212 213 2.426024 TCGGAAATGAGGGAGTAGAACG 59.574 50.000 0.00 0.00 0.00 3.95
213 214 2.481449 CGGAAATGAGGGAGTAGAACGG 60.481 54.545 0.00 0.00 0.00 4.44
214 215 2.764572 GGAAATGAGGGAGTAGAACGGA 59.235 50.000 0.00 0.00 0.00 4.69
215 216 3.181474 GGAAATGAGGGAGTAGAACGGAG 60.181 52.174 0.00 0.00 0.00 4.63
216 217 2.074729 ATGAGGGAGTAGAACGGAGG 57.925 55.000 0.00 0.00 0.00 4.30
217 218 0.033405 TGAGGGAGTAGAACGGAGGG 60.033 60.000 0.00 0.00 0.00 4.30
218 219 0.258194 GAGGGAGTAGAACGGAGGGA 59.742 60.000 0.00 0.00 0.00 4.20
219 220 0.259356 AGGGAGTAGAACGGAGGGAG 59.741 60.000 0.00 0.00 0.00 4.30
220 221 0.033306 GGGAGTAGAACGGAGGGAGT 60.033 60.000 0.00 0.00 0.00 3.85
221 222 1.213926 GGGAGTAGAACGGAGGGAGTA 59.786 57.143 0.00 0.00 0.00 2.59
222 223 2.357569 GGGAGTAGAACGGAGGGAGTAA 60.358 54.545 0.00 0.00 0.00 2.24
223 224 3.564264 GGAGTAGAACGGAGGGAGTAAT 58.436 50.000 0.00 0.00 0.00 1.89
224 225 3.959449 GGAGTAGAACGGAGGGAGTAATT 59.041 47.826 0.00 0.00 0.00 1.40
225 226 4.037803 GGAGTAGAACGGAGGGAGTAATTC 59.962 50.000 0.00 0.00 0.00 2.17
226 227 3.631227 AGTAGAACGGAGGGAGTAATTCG 59.369 47.826 0.00 0.00 0.00 3.34
227 228 2.454538 AGAACGGAGGGAGTAATTCGT 58.545 47.619 0.00 0.00 0.00 3.85
228 229 3.624777 AGAACGGAGGGAGTAATTCGTA 58.375 45.455 0.00 0.00 0.00 3.43
229 230 3.631227 AGAACGGAGGGAGTAATTCGTAG 59.369 47.826 0.00 0.00 0.00 3.51
230 231 3.287867 ACGGAGGGAGTAATTCGTAGA 57.712 47.619 0.00 0.00 0.00 2.59
231 232 2.948315 ACGGAGGGAGTAATTCGTAGAC 59.052 50.000 0.00 0.00 34.32 2.59
232 233 2.032204 CGGAGGGAGTAATTCGTAGACG 60.032 54.545 0.00 0.00 34.32 4.18
248 249 6.260377 TCGTAGACGATCGTGATAAAAATGT 58.740 36.000 28.12 0.00 44.22 2.71
260 261 6.151691 GTGATAAAAATGTGTGCACTGACAT 58.848 36.000 19.41 16.98 34.16 3.06
263 264 1.882912 AATGTGTGCACTGACATCGT 58.117 45.000 19.66 6.09 31.43 3.73
264 265 1.432514 ATGTGTGCACTGACATCGTC 58.567 50.000 19.41 0.00 0.00 4.20
266 267 1.372872 TGTGCACTGACATCGTCGG 60.373 57.895 19.41 1.39 43.83 4.79
274 275 4.082523 ACATCGTCGGCCCACCTG 62.083 66.667 0.00 0.00 0.00 4.00
580 586 2.687200 CCCCACACCCGATCTCCA 60.687 66.667 0.00 0.00 0.00 3.86
590 603 3.097162 GATCTCCACCCCCACCCC 61.097 72.222 0.00 0.00 0.00 4.95
592 605 3.303050 ATCTCCACCCCCACCCCAT 62.303 63.158 0.00 0.00 0.00 4.00
1201 1225 1.592223 GAGGTGGTGAGGAAGGACG 59.408 63.158 0.00 0.00 0.00 4.79
1202 1226 1.889530 GAGGTGGTGAGGAAGGACGG 61.890 65.000 0.00 0.00 0.00 4.79
1497 1521 6.346896 CAATTACTCCTACAGGAAGGGTAAC 58.653 44.000 9.54 0.00 44.91 2.50
1519 1543 2.830370 CCAAGGATTCGGCAGCCC 60.830 66.667 5.63 0.00 0.00 5.19
1539 1563 1.081277 GAAGGAGGTGGAGGAGGGT 59.919 63.158 0.00 0.00 0.00 4.34
1542 1566 3.403558 GAGGTGGAGGAGGGTGCC 61.404 72.222 0.00 0.00 0.00 5.01
1578 1608 2.361230 GAAGGGAAGGTTGGGGCG 60.361 66.667 0.00 0.00 0.00 6.13
1633 1663 2.264480 CGCCGGTGATCAAGGTGA 59.736 61.111 21.17 0.00 37.73 4.02
1656 1686 1.186267 ACTCGGTGGAGAAGGGTGTC 61.186 60.000 0.00 0.00 43.27 3.67
1661 1691 1.070786 TGGAGAAGGGTGTCGCAAC 59.929 57.895 0.00 0.00 0.00 4.17
1669 1699 3.279116 GTGTCGCAACAGCAGGCA 61.279 61.111 0.00 0.00 35.64 4.75
1673 1703 4.034258 CGCAACAGCAGGCACAGG 62.034 66.667 0.00 0.00 0.00 4.00
1689 1719 0.034186 CAGGGAATGGGCAAGCAGTA 60.034 55.000 0.00 0.00 0.00 2.74
1733 1763 1.777272 AGGTGGGGATAAGAAGGATGC 59.223 52.381 0.00 0.00 0.00 3.91
1736 1766 2.173569 GTGGGGATAAGAAGGATGCTGT 59.826 50.000 0.00 0.00 0.00 4.40
1773 1803 0.169230 CTGTCGTCGAACTGGAGGAG 59.831 60.000 0.00 0.00 32.07 3.69
1852 1882 3.120947 CGACGATGCTAATTCTGATGCTC 59.879 47.826 0.00 0.00 0.00 4.26
1931 1961 2.231478 CGAGAAAGGCTGTTACAGAGGA 59.769 50.000 17.40 0.00 32.44 3.71
1932 1962 3.118956 CGAGAAAGGCTGTTACAGAGGAT 60.119 47.826 17.40 0.00 32.44 3.24
1941 1971 4.687219 GCTGTTACAGAGGATAATGCCCTT 60.687 45.833 17.40 0.00 33.36 3.95
1973 2003 1.183030 TCGACGGACCTTGGTGTGAT 61.183 55.000 0.00 0.00 0.00 3.06
2092 2122 2.435372 TCACTTCCACCTTGCTGTTT 57.565 45.000 0.00 0.00 0.00 2.83
2099 2129 1.476085 CCACCTTGCTGTTTGTTGTGA 59.524 47.619 0.00 0.00 0.00 3.58
2100 2130 2.101249 CCACCTTGCTGTTTGTTGTGAT 59.899 45.455 0.00 0.00 0.00 3.06
2103 2133 2.101249 CCTTGCTGTTTGTTGTGATGGT 59.899 45.455 0.00 0.00 0.00 3.55
2108 2138 4.766373 TGCTGTTTGTTGTGATGGTGATAT 59.234 37.500 0.00 0.00 0.00 1.63
2114 2144 9.898152 TGTTTGTTGTGATGGTGATATAGAATA 57.102 29.630 0.00 0.00 0.00 1.75
2161 2191 4.908601 TGTGGATTGTGGACTGTAGAAT 57.091 40.909 0.00 0.00 0.00 2.40
2163 2193 5.730550 TGTGGATTGTGGACTGTAGAATAC 58.269 41.667 0.00 0.00 43.42 1.89
2164 2194 4.804139 GTGGATTGTGGACTGTAGAATACG 59.196 45.833 0.00 0.00 46.99 3.06
2177 2207 6.016443 ACTGTAGAATACGATGTAAGTAGGCC 60.016 42.308 0.00 0.00 46.99 5.19
2254 2286 4.281688 ACCTGGCACATCAATATTTATGGC 59.718 41.667 12.97 12.18 38.20 4.40
2255 2287 4.322198 CCTGGCACATCAATATTTATGGCC 60.322 45.833 22.48 22.48 38.20 5.36
2256 2288 4.482030 TGGCACATCAATATTTATGGCCT 58.518 39.130 25.84 5.19 38.85 5.19
2257 2289 4.281435 TGGCACATCAATATTTATGGCCTG 59.719 41.667 25.84 14.15 38.85 4.85
2258 2290 4.281688 GGCACATCAATATTTATGGCCTGT 59.718 41.667 22.22 0.00 36.91 4.00
2259 2291 5.221501 GGCACATCAATATTTATGGCCTGTT 60.222 40.000 22.22 0.00 36.91 3.16
2260 2292 6.282930 GCACATCAATATTTATGGCCTGTTT 58.717 36.000 12.97 0.00 0.00 2.83
2268 2300 9.612066 CAATATTTATGGCCTGTTTTTACCAAT 57.388 29.630 3.32 0.00 35.41 3.16
2328 2360 3.659786 TGTTCAAGTGTCTGGGTAATCG 58.340 45.455 0.00 0.00 0.00 3.34
2401 2433 8.276252 TGATCCTTTGCTTATTTGGTAAGTAC 57.724 34.615 0.00 0.00 41.55 2.73
2410 2442 7.013529 GCTTATTTGGTAAGTACGTGTTCTTG 58.986 38.462 0.00 0.00 41.55 3.02
2430 2462 8.734386 GTTCTTGTCCATTTTAGATTGTCTCAT 58.266 33.333 0.00 0.00 0.00 2.90
2481 2513 4.080863 GTGGTGATGGAGGTAGATTTCTGT 60.081 45.833 0.00 0.00 0.00 3.41
2521 2553 4.142403 GGTAACTTTGCTTGCATATCAGCA 60.142 41.667 6.71 6.71 43.99 4.41
2535 2567 8.523523 TGCATATCAGCAATATTTGTATTTGC 57.476 30.769 0.00 0.00 42.46 3.68
2556 2588 2.281002 TGCGCTGCATCACTGTGT 60.281 55.556 9.73 0.00 31.71 3.72
2560 2592 0.870393 CGCTGCATCACTGTGTTCTT 59.130 50.000 7.79 0.00 0.00 2.52
2575 2607 3.002348 GTGTTCTTTCGCTGTTAGCAGTT 59.998 43.478 8.48 0.00 42.58 3.16
2579 2611 2.248280 TTCGCTGTTAGCAGTTTCCA 57.752 45.000 8.48 0.00 42.58 3.53
2580 2612 2.472695 TCGCTGTTAGCAGTTTCCAT 57.527 45.000 8.48 0.00 42.58 3.41
2581 2613 2.778299 TCGCTGTTAGCAGTTTCCATT 58.222 42.857 8.48 0.00 42.58 3.16
2582 2614 3.932822 TCGCTGTTAGCAGTTTCCATTA 58.067 40.909 8.48 0.00 42.58 1.90
2583 2615 4.320023 TCGCTGTTAGCAGTTTCCATTAA 58.680 39.130 8.48 0.00 42.58 1.40
2584 2616 4.391830 TCGCTGTTAGCAGTTTCCATTAAG 59.608 41.667 8.48 0.00 42.58 1.85
2585 2617 4.154195 CGCTGTTAGCAGTTTCCATTAAGT 59.846 41.667 8.48 0.00 42.58 2.24
2587 2619 5.619981 GCTGTTAGCAGTTTCCATTAAGTGG 60.620 44.000 8.48 0.00 45.73 4.00
2588 2620 5.106157 CTGTTAGCAGTTTCCATTAAGTGGG 60.106 44.000 0.00 0.00 41.82 4.61
2590 2622 9.383183 CTGTTAGCAGTTTCCATTAAGTGGGTG 62.383 44.444 0.00 0.00 41.82 4.61
2600 2632 6.937436 CCATTAAGTGGGTGGTTAGTTATC 57.063 41.667 0.00 0.00 44.79 1.75
2601 2633 5.826208 CCATTAAGTGGGTGGTTAGTTATCC 59.174 44.000 0.00 0.00 44.79 2.59
2602 2634 6.419791 CATTAAGTGGGTGGTTAGTTATCCA 58.580 40.000 0.00 0.00 0.00 3.41
2603 2635 6.451292 TTAAGTGGGTGGTTAGTTATCCAA 57.549 37.500 0.00 0.00 35.38 3.53
2604 2636 5.530176 AAGTGGGTGGTTAGTTATCCAAT 57.470 39.130 0.00 0.00 35.38 3.16
2605 2637 4.855340 AGTGGGTGGTTAGTTATCCAATG 58.145 43.478 0.00 0.00 35.38 2.82
2606 2638 4.538490 AGTGGGTGGTTAGTTATCCAATGA 59.462 41.667 0.00 0.00 35.38 2.57
2607 2639 5.014755 AGTGGGTGGTTAGTTATCCAATGAA 59.985 40.000 0.00 0.00 35.38 2.57
2608 2640 5.712917 GTGGGTGGTTAGTTATCCAATGAAA 59.287 40.000 0.00 0.00 35.38 2.69
2609 2641 5.949354 TGGGTGGTTAGTTATCCAATGAAAG 59.051 40.000 0.00 0.00 35.38 2.62
2610 2642 6.184789 GGGTGGTTAGTTATCCAATGAAAGA 58.815 40.000 0.00 0.00 35.38 2.52
2611 2643 6.661805 GGGTGGTTAGTTATCCAATGAAAGAA 59.338 38.462 0.00 0.00 35.38 2.52
2612 2644 7.177744 GGGTGGTTAGTTATCCAATGAAAGAAA 59.822 37.037 0.00 0.00 35.38 2.52
2613 2645 8.581578 GGTGGTTAGTTATCCAATGAAAGAAAA 58.418 33.333 0.00 0.00 35.38 2.29
2614 2646 9.974980 GTGGTTAGTTATCCAATGAAAGAAAAA 57.025 29.630 0.00 0.00 35.38 1.94
2621 2653 9.087424 GTTATCCAATGAAAGAAAAATGGTAGC 57.913 33.333 0.00 0.00 0.00 3.58
2622 2654 6.662865 TCCAATGAAAGAAAAATGGTAGCA 57.337 33.333 0.00 0.00 0.00 3.49
2623 2655 6.454795 TCCAATGAAAGAAAAATGGTAGCAC 58.545 36.000 0.00 0.00 0.00 4.40
2624 2656 6.267471 TCCAATGAAAGAAAAATGGTAGCACT 59.733 34.615 0.00 0.00 0.00 4.40
2625 2657 6.587608 CCAATGAAAGAAAAATGGTAGCACTC 59.412 38.462 0.00 0.00 0.00 3.51
2626 2658 6.899393 ATGAAAGAAAAATGGTAGCACTCA 57.101 33.333 0.00 0.00 0.00 3.41
2627 2659 6.317789 TGAAAGAAAAATGGTAGCACTCAG 57.682 37.500 0.00 0.00 0.00 3.35
2628 2660 5.827797 TGAAAGAAAAATGGTAGCACTCAGT 59.172 36.000 0.00 0.00 0.00 3.41
2629 2661 6.321181 TGAAAGAAAAATGGTAGCACTCAGTT 59.679 34.615 0.00 0.00 0.00 3.16
2630 2662 5.695851 AGAAAAATGGTAGCACTCAGTTG 57.304 39.130 0.00 0.00 0.00 3.16
2631 2663 4.520492 AGAAAAATGGTAGCACTCAGTTGG 59.480 41.667 0.00 0.00 0.00 3.77
2632 2664 3.508845 AAATGGTAGCACTCAGTTGGT 57.491 42.857 0.00 0.00 0.00 3.67
2633 2665 2.479566 ATGGTAGCACTCAGTTGGTG 57.520 50.000 0.00 0.00 37.70 4.17
2634 2666 1.128200 TGGTAGCACTCAGTTGGTGT 58.872 50.000 0.00 0.00 37.07 4.16
2635 2667 1.070134 TGGTAGCACTCAGTTGGTGTC 59.930 52.381 0.00 0.00 37.07 3.67
2636 2668 1.344763 GGTAGCACTCAGTTGGTGTCT 59.655 52.381 0.00 0.00 37.07 3.41
2637 2669 2.561419 GGTAGCACTCAGTTGGTGTCTA 59.439 50.000 0.00 0.00 37.07 2.59
2638 2670 3.006537 GGTAGCACTCAGTTGGTGTCTAA 59.993 47.826 0.00 0.00 37.07 2.10
2639 2671 4.322801 GGTAGCACTCAGTTGGTGTCTAAT 60.323 45.833 0.00 0.00 37.07 1.73
2640 2672 4.357918 AGCACTCAGTTGGTGTCTAATT 57.642 40.909 0.00 0.00 37.07 1.40
2641 2673 4.067896 AGCACTCAGTTGGTGTCTAATTG 58.932 43.478 0.00 0.00 37.07 2.32
2642 2674 3.815401 GCACTCAGTTGGTGTCTAATTGT 59.185 43.478 0.00 0.00 37.07 2.71
2643 2675 4.083802 GCACTCAGTTGGTGTCTAATTGTC 60.084 45.833 0.00 0.00 37.07 3.18
2651 2683 5.745312 TGGTGTCTAATTGTCATCTCACT 57.255 39.130 0.00 0.00 0.00 3.41
2667 2699 1.069204 TCACTGTCAGGACTCACAAGC 59.931 52.381 4.53 0.00 0.00 4.01
2672 2704 2.698274 TGTCAGGACTCACAAGCTACAA 59.302 45.455 0.65 0.00 0.00 2.41
2677 2709 2.059541 GACTCACAAGCTACAACCGAC 58.940 52.381 0.00 0.00 0.00 4.79
2682 2714 0.792640 CAAGCTACAACCGACTGCAG 59.207 55.000 13.48 13.48 0.00 4.41
2684 2716 0.038159 AGCTACAACCGACTGCAGTC 60.038 55.000 32.73 32.73 41.47 3.51
2694 2726 3.066900 ACCGACTGCAGTCTCATACATAC 59.933 47.826 36.78 13.91 42.66 2.39
2696 2728 4.532276 CGACTGCAGTCTCATACATACTC 58.468 47.826 36.78 13.24 42.66 2.59
2700 2732 3.130340 TGCAGTCTCATACATACTCGCAA 59.870 43.478 0.00 0.00 30.14 4.85
2718 2750 4.688413 TCGCAAATAAATTGGCACCTTTTC 59.312 37.500 3.12 0.00 39.54 2.29
2725 2757 7.732222 ATAAATTGGCACCTTTTCTATGGAA 57.268 32.000 0.00 0.00 0.00 3.53
2726 2758 5.665916 AATTGGCACCTTTTCTATGGAAG 57.334 39.130 0.00 0.00 32.61 3.46
2742 2774 7.512130 TCTATGGAAGATATTGTCATGTGCTT 58.488 34.615 0.00 0.00 0.00 3.91
2762 2794 1.123928 AGGGTTGGAGCCTAATCTCG 58.876 55.000 0.00 0.00 45.76 4.04
2816 2850 8.161425 GCTAGAATATAGATGGTTGGGGTAAAA 58.839 37.037 0.00 0.00 0.00 1.52
2817 2851 9.726438 CTAGAATATAGATGGTTGGGGTAAAAG 57.274 37.037 0.00 0.00 0.00 2.27
2818 2852 7.526918 AGAATATAGATGGTTGGGGTAAAAGG 58.473 38.462 0.00 0.00 0.00 3.11
2822 2856 2.687003 TGGTTGGGGTAAAAGGAAGG 57.313 50.000 0.00 0.00 0.00 3.46
2823 2857 1.263356 GGTTGGGGTAAAAGGAAGGC 58.737 55.000 0.00 0.00 0.00 4.35
2824 2858 1.203137 GGTTGGGGTAAAAGGAAGGCT 60.203 52.381 0.00 0.00 0.00 4.58
2825 2859 2.605257 GTTGGGGTAAAAGGAAGGCTT 58.395 47.619 0.00 0.00 0.00 4.35
2826 2860 3.500836 GGTTGGGGTAAAAGGAAGGCTTA 60.501 47.826 0.00 0.00 0.00 3.09
2827 2861 3.444792 TGGGGTAAAAGGAAGGCTTAC 57.555 47.619 0.00 0.00 0.00 2.34
2828 2862 2.290450 TGGGGTAAAAGGAAGGCTTACG 60.290 50.000 3.28 0.00 0.00 3.18
2829 2863 2.026915 GGGGTAAAAGGAAGGCTTACGA 60.027 50.000 3.28 0.00 0.00 3.43
2872 2906 6.753107 AACTTGGAAACTAATTGATACGGG 57.247 37.500 0.00 0.00 0.00 5.28
2889 2923 2.903404 GGGATCCCCTAGGCTATCG 58.097 63.158 21.42 0.00 41.34 2.92
2894 2928 0.112606 TCCCCTAGGCTATCGTGAGG 59.887 60.000 2.05 0.00 0.00 3.86
2982 3016 9.066892 ACAGATATGTGTTGTTACTTCATTTGT 57.933 29.630 0.00 0.00 0.00 2.83
2995 3029 5.133221 ACTTCATTTGTGTAGCCACTTTCT 58.867 37.500 0.00 0.00 42.34 2.52
2996 3030 5.009010 ACTTCATTTGTGTAGCCACTTTCTG 59.991 40.000 0.00 0.00 42.34 3.02
3003 3037 3.813166 GTGTAGCCACTTTCTGTTGCTAA 59.187 43.478 3.70 0.00 46.80 3.09
3011 3045 7.447238 AGCCACTTTCTGTTGCTAATAAACTTA 59.553 33.333 0.00 0.00 44.50 2.24
3043 3084 7.923414 AGAAGAAAATGTTCACTATGTACCC 57.077 36.000 0.00 0.00 36.09 3.69
3048 3089 3.620427 TGTTCACTATGTACCCGCATT 57.380 42.857 0.00 0.00 0.00 3.56
3060 3101 5.129634 TGTACCCGCATTTCATTGATGTAT 58.870 37.500 0.00 0.00 0.00 2.29
3066 3107 6.205464 CCCGCATTTCATTGATGTATAACTCT 59.795 38.462 0.00 0.00 0.00 3.24
3067 3108 7.255242 CCCGCATTTCATTGATGTATAACTCTT 60.255 37.037 0.00 0.00 0.00 2.85
3095 3136 0.482446 TGGGGCTGGTTTCAACAGAT 59.518 50.000 0.00 0.00 38.20 2.90
3098 3139 3.245586 TGGGGCTGGTTTCAACAGATTAT 60.246 43.478 0.00 0.00 38.20 1.28
3099 3140 3.381590 GGGGCTGGTTTCAACAGATTATC 59.618 47.826 0.00 0.00 38.20 1.75
3122 3164 1.517242 AGCTCTTCTTGTTGCCTTCG 58.483 50.000 0.00 0.00 0.00 3.79
3131 3173 2.248280 TGTTGCCTTCGCTGAACTAA 57.752 45.000 0.00 0.00 35.36 2.24
3135 3177 4.037446 TGTTGCCTTCGCTGAACTAATTTT 59.963 37.500 0.00 0.00 35.36 1.82
3136 3178 5.239744 TGTTGCCTTCGCTGAACTAATTTTA 59.760 36.000 0.00 0.00 35.36 1.52
3137 3179 6.072175 TGTTGCCTTCGCTGAACTAATTTTAT 60.072 34.615 0.00 0.00 35.36 1.40
3138 3180 5.879237 TGCCTTCGCTGAACTAATTTTATG 58.121 37.500 0.00 0.00 35.36 1.90
3139 3181 5.414454 TGCCTTCGCTGAACTAATTTTATGT 59.586 36.000 0.00 0.00 35.36 2.29
3140 3182 5.739161 GCCTTCGCTGAACTAATTTTATGTG 59.261 40.000 0.00 0.00 0.00 3.21
3141 3183 6.403200 GCCTTCGCTGAACTAATTTTATGTGA 60.403 38.462 0.00 0.00 0.00 3.58
3142 3184 7.679638 GCCTTCGCTGAACTAATTTTATGTGAT 60.680 37.037 0.00 0.00 0.00 3.06
3147 3196 8.577939 CGCTGAACTAATTTTATGTGATTTGTG 58.422 33.333 0.00 0.00 0.00 3.33
3154 3203 5.878406 TTTTATGTGATTTGTGGGTGGTT 57.122 34.783 0.00 0.00 0.00 3.67
3163 3212 5.299782 TGATTTGTGGGTGGTTTGTACTTAC 59.700 40.000 0.00 0.00 0.00 2.34
3176 3225 4.425180 TGTACTTACCTCCACTTTGCAA 57.575 40.909 0.00 0.00 0.00 4.08
3198 3247 6.524586 GCAACTCTTGTATGCTAACACAATTC 59.475 38.462 0.00 0.00 37.12 2.17
3199 3248 7.573843 GCAACTCTTGTATGCTAACACAATTCT 60.574 37.037 0.00 0.00 37.12 2.40
3201 3250 9.502091 AACTCTTGTATGCTAACACAATTCTAA 57.498 29.630 0.00 0.00 34.34 2.10
3215 3264 7.989826 ACACAATTCTAATTTATCTGACCTGC 58.010 34.615 0.00 0.00 0.00 4.85
3223 3272 8.580720 TCTAATTTATCTGACCTGCTGTATCTC 58.419 37.037 0.00 0.00 0.00 2.75
3224 3273 4.837896 TTATCTGACCTGCTGTATCTCG 57.162 45.455 0.00 0.00 0.00 4.04
3238 3298 4.363138 TGTATCTCGTCTCATGAATGTGC 58.637 43.478 0.00 0.00 0.00 4.57
3245 3305 6.539826 TCTCGTCTCATGAATGTGCAAATTAT 59.460 34.615 0.95 0.00 0.00 1.28
3247 3307 7.188834 TCGTCTCATGAATGTGCAAATTATTC 58.811 34.615 0.95 4.89 0.00 1.75
3252 3312 8.564648 TCATGAATGTGCAAATTATTCGAATC 57.435 30.769 15.25 0.00 34.40 2.52
3260 3320 5.285845 TGCAAATTATTCGAATCAACAAGCG 59.714 36.000 15.25 0.00 0.00 4.68
3366 3427 0.884704 TCTTGTTCTTGGCAGCCGTC 60.885 55.000 7.03 0.00 0.00 4.79
3379 3440 1.959226 GCCGTCAGAAAGGCGTTCA 60.959 57.895 15.39 0.00 45.80 3.18
3404 3465 6.861065 AACGTCTTGAGAAGCAAAATCTTA 57.139 33.333 0.00 0.00 35.74 2.10
3431 3492 5.499139 TGAAAAGAAGGTAAGCTTGTGTG 57.501 39.130 9.86 0.00 0.00 3.82
3446 3507 4.965158 GCTTGTGTGCAAAATGTTCAATTG 59.035 37.500 0.00 0.00 33.73 2.32
3453 3514 8.497554 GTGTGCAAAATGTTCAATTGTAATGAT 58.502 29.630 5.13 0.00 0.00 2.45
3454 3515 9.702494 TGTGCAAAATGTTCAATTGTAATGATA 57.298 25.926 5.13 0.00 0.00 2.15
3475 3537 7.939782 TGATATGTTTGACTTTTTCTCTGCAA 58.060 30.769 0.00 0.00 0.00 4.08
3476 3538 8.077991 TGATATGTTTGACTTTTTCTCTGCAAG 58.922 33.333 0.00 0.00 0.00 4.01
3505 3567 6.818644 TGCATAGGAGATACTTGTTTGAGTTC 59.181 38.462 0.00 0.00 0.00 3.01
3507 3569 7.223777 GCATAGGAGATACTTGTTTGAGTTCTC 59.776 40.741 0.00 0.00 35.46 2.87
3591 3653 7.648142 TGAATTCTGTGAGTTTACACCATTTC 58.352 34.615 7.05 0.00 39.69 2.17
3603 3665 9.479549 AGTTTACACCATTTCTTCCATATGAAT 57.520 29.630 3.65 0.00 31.06 2.57
3638 3774 5.449862 GCATATTTGAAACGGCCATTCACTA 60.450 40.000 18.00 13.46 36.57 2.74
3644 3780 5.189928 TGAAACGGCCATTCACTATAACAT 58.810 37.500 15.14 0.00 32.10 2.71
3748 3884 2.181523 TAGCTGGGCCTGGAGGAGAA 62.182 60.000 12.70 0.00 37.39 2.87
3787 3923 2.496899 TCCTGAATGAAGACAAGGCC 57.503 50.000 0.00 0.00 0.00 5.19
3790 3926 3.782523 TCCTGAATGAAGACAAGGCCTAT 59.217 43.478 5.16 0.00 0.00 2.57
3873 4009 8.015087 TGAGAAAACAGCAAATAATGTTACGAG 58.985 33.333 0.00 0.00 38.66 4.18
3874 4010 7.305474 AGAAAACAGCAAATAATGTTACGAGG 58.695 34.615 0.00 0.00 38.66 4.63
3904 4040 6.706716 GGTCTTATGTATGTTCTAAAGAGGGC 59.293 42.308 0.00 0.00 0.00 5.19
3909 4045 4.534500 TGTATGTTCTAAAGAGGGCTTCCA 59.466 41.667 0.00 0.00 31.82 3.53
3910 4046 4.870021 ATGTTCTAAAGAGGGCTTCCAT 57.130 40.909 0.00 0.00 31.82 3.41
3920 4056 3.054065 AGAGGGCTTCCATCCTAAAAGTG 60.054 47.826 0.00 0.00 32.74 3.16
3928 4064 5.499004 TCCATCCTAAAAGTGTTACTGCT 57.501 39.130 0.00 0.00 0.00 4.24
3954 4090 4.610945 CCAAAGAAACAACGAGCAGAAAT 58.389 39.130 0.00 0.00 0.00 2.17
3967 4103 2.751806 AGCAGAAATAAGAACTGGCTGC 59.248 45.455 0.00 0.00 45.45 5.25
3987 4123 3.712162 CGAAGCACACATGACTGTTAG 57.288 47.619 0.00 0.00 31.62 2.34
4012 4148 5.018539 TCACTACTAGCGGCAAATATGTT 57.981 39.130 1.45 0.00 0.00 2.71
4018 4154 2.436417 AGCGGCAAATATGTTGTGACT 58.564 42.857 1.45 0.00 0.00 3.41
4023 4159 4.629634 CGGCAAATATGTTGTGACTGAGTA 59.370 41.667 0.00 0.00 0.00 2.59
4057 4193 6.236409 TCATAATCATGATCTTGAAGCTCCC 58.764 40.000 14.60 0.00 36.22 4.30
4058 4194 4.792513 AATCATGATCTTGAAGCTCCCT 57.207 40.909 14.60 0.00 0.00 4.20
4078 4214 4.338879 CCTTGGTGGACATTCAGATTCTT 58.661 43.478 0.00 0.00 38.35 2.52
4117 4253 0.798776 CAAAGTTACAGCAGCCTCCG 59.201 55.000 0.00 0.00 0.00 4.63
4182 4318 2.099592 ACGTAAGGACAAGACACACGAA 59.900 45.455 0.00 0.00 46.39 3.85
4194 4330 4.122776 AGACACACGAAGGATATGCAATC 58.877 43.478 0.00 0.00 0.00 2.67
4195 4331 3.871006 GACACACGAAGGATATGCAATCA 59.129 43.478 0.00 0.00 0.00 2.57
4206 4342 0.464916 ATGCAATCAGGCGATGCTCA 60.465 50.000 0.00 1.69 36.28 4.26
4241 4377 7.345691 TGAATATTTACAGAGGATGAAAGGCA 58.654 34.615 0.00 0.00 0.00 4.75
4377 4513 4.663636 GTGTTGACACAAGGTATAGCAC 57.336 45.455 9.28 0.00 45.75 4.40
4397 4533 4.399303 GCACAAGTGATTATTGTAGGCCTT 59.601 41.667 12.58 0.00 38.80 4.35
4430 4566 7.339212 TGTTCATTGGAGTTAACCATCATAAGG 59.661 37.037 0.88 0.00 39.82 2.69
4519 4655 5.180117 TGAAACTTTCAAGTCTGCTATGAGC 59.820 40.000 1.47 0.00 39.09 4.26
4624 4760 3.398406 TCGCTTCTCACTGTTGCATTTA 58.602 40.909 0.00 0.00 0.00 1.40
4666 4802 4.755266 ACTAAGCGATACATTCCAAGGT 57.245 40.909 0.00 0.00 0.00 3.50
4729 4865 0.030603 ATGAGGAGGAGGGGGACTTC 60.031 60.000 0.00 0.00 35.29 3.01
4906 5042 1.271597 GCCATCCTGACAGGTGTTCTT 60.272 52.381 21.06 0.00 36.53 2.52
4982 5118 3.429207 GGAGAAACGTCTAGCTGAACAAC 59.571 47.826 0.00 0.00 32.80 3.32
5038 5174 1.135170 GTACCACCTCTGCGGTTACTC 60.135 57.143 0.00 0.00 46.37 2.59
5078 5214 5.187772 ACATATACTCCTGCACTGTTTGAGA 59.812 40.000 0.00 0.00 0.00 3.27
5108 5244 6.263168 CAGGTTAGAATTTGAACTGGTCTTGT 59.737 38.462 0.00 0.00 0.00 3.16
5222 5358 8.768957 ATTTGACTCATCAGAATATATGGTCG 57.231 34.615 0.00 0.00 35.83 4.79
5248 5384 5.762045 TGTAGCTGCAAGAAGTTTGAATTC 58.238 37.500 0.43 0.00 34.07 2.17
5271 5407 1.259840 GGCCTTCCATGTTGCCATGT 61.260 55.000 0.00 0.00 45.83 3.21
5773 6154 1.811965 CCATGCTGGATTGAACGTGAA 59.188 47.619 0.00 0.00 40.96 3.18
5774 6155 2.424601 CCATGCTGGATTGAACGTGAAT 59.575 45.455 0.00 0.00 40.96 2.57
5775 6156 3.627123 CCATGCTGGATTGAACGTGAATA 59.373 43.478 0.00 0.00 40.96 1.75
5776 6157 4.496341 CCATGCTGGATTGAACGTGAATAC 60.496 45.833 0.00 0.00 40.96 1.89
5777 6158 3.669536 TGCTGGATTGAACGTGAATACA 58.330 40.909 5.57 5.57 0.00 2.29
5778 6159 4.260985 TGCTGGATTGAACGTGAATACAT 58.739 39.130 6.05 0.00 0.00 2.29
5779 6160 4.094739 TGCTGGATTGAACGTGAATACATG 59.905 41.667 6.05 0.00 38.80 3.21
5780 6161 4.332543 GCTGGATTGAACGTGAATACATGA 59.667 41.667 0.00 0.00 36.88 3.07
5922 6303 0.031616 AACCAGTTCCTTGCCCCAAA 60.032 50.000 0.00 0.00 0.00 3.28
6108 6505 6.847421 AATTCTCTTCAAGGATTTTCTGGG 57.153 37.500 0.00 0.00 27.65 4.45
6112 6509 5.251468 TCTCTTCAAGGATTTTCTGGGATGA 59.749 40.000 0.00 0.00 0.00 2.92
6253 6651 4.910195 TCAGCAACCTCATCTACAACAAT 58.090 39.130 0.00 0.00 0.00 2.71
6265 6663 6.375174 TCATCTACAACAATCACCCTTTCATG 59.625 38.462 0.00 0.00 0.00 3.07
6300 6698 3.758023 TGCACCAGGTGATTCTACATTTG 59.242 43.478 24.96 0.00 35.23 2.32
6315 6713 8.437360 TTCTACATTTGTGCATTACTCTATGG 57.563 34.615 0.00 0.00 0.00 2.74
6340 6738 3.433173 GGTTACACCTGTGTTGTCCTTCT 60.433 47.826 8.41 0.00 41.83 2.85
6343 6741 2.439507 ACACCTGTGTTGTCCTTCTCAT 59.560 45.455 0.00 0.00 41.83 2.90
6358 6756 5.252863 TCCTTCTCATGGGATTTTACTCCAA 59.747 40.000 0.00 0.00 37.01 3.53
6406 6804 6.599638 GGTAGGACTTTTAAGTGAGCATTGAT 59.400 38.462 0.00 0.00 39.88 2.57
6431 6829 9.805204 ATTTCATATCCTTACATACCCCTCTAT 57.195 33.333 0.00 0.00 0.00 1.98
6434 6832 9.710818 TCATATCCTTACATACCCCTCTATAAC 57.289 37.037 0.00 0.00 0.00 1.89
6466 6864 6.611613 TCCATGGGAGATATTCATGTACTC 57.388 41.667 13.02 0.00 37.24 2.59
6467 6865 5.485353 TCCATGGGAGATATTCATGTACTCC 59.515 44.000 13.02 0.00 44.21 3.85
6471 6869 5.669164 GGAGATATTCATGTACTCCCTCC 57.331 47.826 0.00 0.00 40.58 4.30
6472 6870 4.158764 GGAGATATTCATGTACTCCCTCCG 59.841 50.000 0.00 0.00 40.58 4.63
6473 6871 4.742012 AGATATTCATGTACTCCCTCCGT 58.258 43.478 0.00 0.00 0.00 4.69
6474 6872 5.148502 AGATATTCATGTACTCCCTCCGTT 58.851 41.667 0.00 0.00 0.00 4.44
6475 6873 3.821421 ATTCATGTACTCCCTCCGTTC 57.179 47.619 0.00 0.00 0.00 3.95
6476 6874 1.100510 TCATGTACTCCCTCCGTTCG 58.899 55.000 0.00 0.00 0.00 3.95
6477 6875 0.102481 CATGTACTCCCTCCGTTCGG 59.898 60.000 4.74 4.74 0.00 4.30
6478 6876 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
6479 6877 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
6480 6878 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
6481 6879 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
6482 6880 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
6483 6881 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
6484 6882 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
6485 6883 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
6486 6884 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
6487 6885 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
6488 6886 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
6489 6887 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
6490 6888 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
6491 6889 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
6492 6890 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
6493 6891 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
6494 6892 4.430908 GTTCGGAATTACTTGTCTCGGAT 58.569 43.478 0.00 0.00 0.00 4.18
6495 6893 5.585390 GTTCGGAATTACTTGTCTCGGATA 58.415 41.667 0.00 0.00 0.00 2.59
6496 6894 6.214399 GTTCGGAATTACTTGTCTCGGATAT 58.786 40.000 0.00 0.00 0.00 1.63
6497 6895 5.769367 TCGGAATTACTTGTCTCGGATATG 58.231 41.667 0.00 0.00 0.00 1.78
6498 6896 4.923871 CGGAATTACTTGTCTCGGATATGG 59.076 45.833 0.00 0.00 0.00 2.74
6499 6897 5.278808 CGGAATTACTTGTCTCGGATATGGA 60.279 44.000 0.00 0.00 0.00 3.41
6500 6898 6.572509 CGGAATTACTTGTCTCGGATATGGAT 60.573 42.308 0.00 0.00 0.00 3.41
6501 6899 6.591834 GGAATTACTTGTCTCGGATATGGATG 59.408 42.308 0.00 0.00 0.00 3.51
6502 6900 6.672266 ATTACTTGTCTCGGATATGGATGT 57.328 37.500 0.00 0.00 0.00 3.06
6503 6901 7.776618 ATTACTTGTCTCGGATATGGATGTA 57.223 36.000 0.00 0.00 0.00 2.29
6504 6902 7.776618 TTACTTGTCTCGGATATGGATGTAT 57.223 36.000 0.00 0.00 0.00 2.29
6505 6903 6.274157 ACTTGTCTCGGATATGGATGTATC 57.726 41.667 0.00 0.00 0.00 2.24
6506 6904 6.013379 ACTTGTCTCGGATATGGATGTATCT 58.987 40.000 0.00 0.00 32.78 1.98
6507 6905 7.175797 ACTTGTCTCGGATATGGATGTATCTA 58.824 38.462 0.00 0.00 32.78 1.98
6508 6906 7.338196 ACTTGTCTCGGATATGGATGTATCTAG 59.662 40.741 0.00 0.00 32.78 2.43
6509 6907 6.958767 TGTCTCGGATATGGATGTATCTAGA 58.041 40.000 0.00 0.00 32.78 2.43
6510 6908 7.402862 TGTCTCGGATATGGATGTATCTAGAA 58.597 38.462 0.00 0.00 31.35 2.10
6511 6909 7.337184 TGTCTCGGATATGGATGTATCTAGAAC 59.663 40.741 0.00 0.00 31.35 3.01
6512 6910 7.554835 GTCTCGGATATGGATGTATCTAGAACT 59.445 40.741 0.00 0.00 31.35 3.01
6513 6911 8.769359 TCTCGGATATGGATGTATCTAGAACTA 58.231 37.037 0.00 0.00 32.78 2.24
6514 6912 9.397280 CTCGGATATGGATGTATCTAGAACTAA 57.603 37.037 0.00 0.00 32.78 2.24
6515 6913 9.749340 TCGGATATGGATGTATCTAGAACTAAA 57.251 33.333 0.00 0.00 32.78 1.85
6541 6939 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
6542 6940 7.071069 ACATCTAGATACATCCATTTCTGCA 57.929 36.000 4.54 0.00 0.00 4.41
6543 6941 7.512130 ACATCTAGATACATCCATTTCTGCAA 58.488 34.615 4.54 0.00 0.00 4.08
6544 6942 7.443575 ACATCTAGATACATCCATTTCTGCAAC 59.556 37.037 4.54 0.00 0.00 4.17
6545 6943 6.888105 TCTAGATACATCCATTTCTGCAACA 58.112 36.000 0.00 0.00 0.00 3.33
6546 6944 7.337938 TCTAGATACATCCATTTCTGCAACAA 58.662 34.615 0.00 0.00 0.00 2.83
6547 6945 6.446781 AGATACATCCATTTCTGCAACAAG 57.553 37.500 0.00 0.00 0.00 3.16
6548 6946 5.948162 AGATACATCCATTTCTGCAACAAGT 59.052 36.000 0.00 0.00 0.00 3.16
6549 6947 7.112122 AGATACATCCATTTCTGCAACAAGTA 58.888 34.615 0.00 0.00 0.00 2.24
6550 6948 7.611467 AGATACATCCATTTCTGCAACAAGTAA 59.389 33.333 0.00 0.00 0.00 2.24
6551 6949 6.594788 ACATCCATTTCTGCAACAAGTAAT 57.405 33.333 0.00 0.00 0.00 1.89
6552 6950 6.996509 ACATCCATTTCTGCAACAAGTAATT 58.003 32.000 0.00 0.00 0.00 1.40
6553 6951 7.092716 ACATCCATTTCTGCAACAAGTAATTC 58.907 34.615 0.00 0.00 0.00 2.17
6554 6952 6.024552 TCCATTTCTGCAACAAGTAATTCC 57.975 37.500 0.00 0.00 0.00 3.01
6555 6953 4.858692 CCATTTCTGCAACAAGTAATTCCG 59.141 41.667 0.00 0.00 0.00 4.30
6556 6954 5.335583 CCATTTCTGCAACAAGTAATTCCGA 60.336 40.000 0.00 0.00 0.00 4.55
6557 6955 5.759506 TTTCTGCAACAAGTAATTCCGAA 57.240 34.783 0.00 0.00 0.00 4.30
6558 6956 4.742438 TCTGCAACAAGTAATTCCGAAC 57.258 40.909 0.00 0.00 0.00 3.95
6559 6957 3.185594 TCTGCAACAAGTAATTCCGAACG 59.814 43.478 0.00 0.00 0.00 3.95
6560 6958 2.224549 TGCAACAAGTAATTCCGAACGG 59.775 45.455 6.94 6.94 0.00 4.44
6561 6959 2.481185 GCAACAAGTAATTCCGAACGGA 59.519 45.455 12.04 12.04 43.52 4.69
6562 6960 3.424433 GCAACAAGTAATTCCGAACGGAG 60.424 47.826 15.34 5.60 46.06 4.63
6563 6961 2.968675 ACAAGTAATTCCGAACGGAGG 58.031 47.619 15.34 4.52 46.06 4.30
6564 6962 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
6565 6963 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
6566 6964 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
6567 6965 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
6568 6966 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
6569 6967 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
6570 6968 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
6736 7389 5.336213 CCAGTCATTGCAATTTCTTAGCAGT 60.336 40.000 9.83 0.00 39.72 4.40
6859 7512 8.950208 AAACTCAACTATCCTAGCTGTAAATC 57.050 34.615 0.00 0.00 0.00 2.17
6987 7642 1.208358 GGTGAAAAGGTTACGCCGC 59.792 57.895 0.00 0.00 43.70 6.53
7004 7659 2.250188 CCGCGTTGAAAGCCATAAAAG 58.750 47.619 4.92 0.00 0.00 2.27
7009 7665 4.047822 CGTTGAAAGCCATAAAAGTGCAA 58.952 39.130 0.00 0.00 0.00 4.08
7012 7668 6.364706 CGTTGAAAGCCATAAAAGTGCAATTA 59.635 34.615 0.00 0.00 0.00 1.40
7013 7669 7.063308 CGTTGAAAGCCATAAAAGTGCAATTAT 59.937 33.333 0.00 0.00 0.00 1.28
7064 7720 2.438075 GCAAGGCCAGGAGCTCTG 60.438 66.667 14.64 9.72 43.05 3.35
7118 7776 0.674895 CTGAGGGAAAACTGGGCGAG 60.675 60.000 0.00 0.00 0.00 5.03
7123 7781 0.875059 GGAAAACTGGGCGAGAACTG 59.125 55.000 2.65 0.00 0.00 3.16
7167 7825 1.872773 AAGGAAGACTAGAGCCTGGG 58.127 55.000 0.00 0.00 0.00 4.45
7169 7827 1.051556 GGAAGACTAGAGCCTGGGGG 61.052 65.000 0.00 0.00 0.00 5.40
7183 7841 2.174854 CCTGGGGGTAAGGTTTAGATGG 59.825 54.545 0.00 0.00 0.00 3.51
7184 7842 3.120108 CTGGGGGTAAGGTTTAGATGGA 58.880 50.000 0.00 0.00 0.00 3.41
7192 7850 6.649557 GGGTAAGGTTTAGATGGACATATTCG 59.350 42.308 0.00 0.00 0.00 3.34
7226 7884 6.127925 GCATAACATCAAGGAACATTGTCTGA 60.128 38.462 0.00 0.00 0.00 3.27
7241 7907 2.111384 GTCTGAGCCAGATACAAGGGA 58.889 52.381 7.95 0.00 42.73 4.20
7318 8028 7.856145 TCATTAACAAGTTTGCCATTTTGTT 57.144 28.000 6.67 6.67 43.72 2.83
7322 8032 4.573900 ACAAGTTTGCCATTTTGTTGACA 58.426 34.783 0.00 0.00 30.05 3.58
7412 8123 4.220602 TGTTCTCCGTGATCTCATCTTTGA 59.779 41.667 0.00 0.00 0.00 2.69
7413 8124 5.105187 TGTTCTCCGTGATCTCATCTTTGAT 60.105 40.000 0.00 0.00 0.00 2.57
7414 8125 5.604758 TCTCCGTGATCTCATCTTTGATT 57.395 39.130 0.00 0.00 0.00 2.57
7415 8126 5.595885 TCTCCGTGATCTCATCTTTGATTC 58.404 41.667 0.00 0.00 0.00 2.52
7416 8127 5.362143 TCTCCGTGATCTCATCTTTGATTCT 59.638 40.000 0.00 0.00 0.00 2.40
7417 8128 5.982356 TCCGTGATCTCATCTTTGATTCTT 58.018 37.500 0.00 0.00 0.00 2.52
7418 8129 6.409704 TCCGTGATCTCATCTTTGATTCTTT 58.590 36.000 0.00 0.00 0.00 2.52
7419 8130 6.314648 TCCGTGATCTCATCTTTGATTCTTTG 59.685 38.462 0.00 0.00 0.00 2.77
7427 8138 8.727910 TCTCATCTTTGATTCTTTGTTCATCTG 58.272 33.333 0.00 0.00 0.00 2.90
7473 8184 2.840066 CGCCAAACACCAAAGCGGA 61.840 57.895 0.00 0.00 42.93 5.54
7525 8287 2.438434 CCTTCGGGCCGCTTGATT 60.438 61.111 23.83 0.00 0.00 2.57
7526 8288 2.046285 CCTTCGGGCCGCTTGATTT 61.046 57.895 23.83 0.00 0.00 2.17
7527 8289 1.595093 CCTTCGGGCCGCTTGATTTT 61.595 55.000 23.83 0.00 0.00 1.82
7528 8290 0.243636 CTTCGGGCCGCTTGATTTTT 59.756 50.000 23.83 0.00 0.00 1.94
7529 8291 1.470890 CTTCGGGCCGCTTGATTTTTA 59.529 47.619 23.83 0.00 0.00 1.52
7530 8292 1.091537 TCGGGCCGCTTGATTTTTAG 58.908 50.000 23.83 0.00 0.00 1.85
7531 8293 0.525455 CGGGCCGCTTGATTTTTAGC 60.525 55.000 15.42 0.00 0.00 3.09
7647 8409 5.480205 GGTCTATTTCCGAACACTCTTCTT 58.520 41.667 0.00 0.00 0.00 2.52
7661 8423 3.509575 ACTCTTCTTCCAGCTCTAGTGTG 59.490 47.826 0.00 0.00 0.00 3.82
7679 8441 2.190578 CCGTGCCCCCTGAAGATC 59.809 66.667 0.00 0.00 0.00 2.75
7683 8446 1.082766 TGCCCCCTGAAGATCTCCA 59.917 57.895 0.00 0.00 0.00 3.86
7684 8447 0.984961 TGCCCCCTGAAGATCTCCAG 60.985 60.000 1.15 1.15 0.00 3.86
7687 8450 1.623557 CCCCCTGAAGATCTCCAGACA 60.624 57.143 11.07 0.00 32.37 3.41
7708 8471 0.603707 TTCCTCTGTTTGCCTCGCTG 60.604 55.000 0.00 0.00 0.00 5.18
7720 8483 1.004560 CTCGCTGGCTCCTCAACAA 60.005 57.895 0.00 0.00 0.00 2.83
7726 8489 2.079925 CTGGCTCCTCAACAAGCTAAC 58.920 52.381 0.00 0.00 38.58 2.34
7747 8510 1.619654 CATCACTTGCTTCCAACCCA 58.380 50.000 0.00 0.00 0.00 4.51
7756 8526 1.946283 GCTTCCAACCCAGTAGCTCAC 60.946 57.143 0.00 0.00 0.00 3.51
7767 8537 3.129462 CCAGTAGCTCACGAGATTCTCAA 59.871 47.826 13.88 0.00 0.00 3.02
7768 8538 4.202101 CCAGTAGCTCACGAGATTCTCAAT 60.202 45.833 13.88 0.00 0.00 2.57
7769 8539 4.975502 CAGTAGCTCACGAGATTCTCAATC 59.024 45.833 13.88 0.00 38.20 2.67
7770 8540 4.642437 AGTAGCTCACGAGATTCTCAATCA 59.358 41.667 13.88 0.00 40.42 2.57
7771 8541 4.462508 AGCTCACGAGATTCTCAATCAA 57.537 40.909 13.88 0.00 40.42 2.57
7772 8542 4.431809 AGCTCACGAGATTCTCAATCAAG 58.568 43.478 13.88 4.78 40.42 3.02
7773 8543 4.081752 AGCTCACGAGATTCTCAATCAAGT 60.082 41.667 13.88 0.00 40.42 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.107552 ACCGATGTGGAAAGGGAAAGAA 59.892 45.455 0.00 0.00 42.00 2.52
3 4 1.702957 ACCGATGTGGAAAGGGAAAGA 59.297 47.619 0.00 0.00 42.00 2.52
4 5 2.200373 ACCGATGTGGAAAGGGAAAG 57.800 50.000 0.00 0.00 42.00 2.62
5 6 3.791953 TTACCGATGTGGAAAGGGAAA 57.208 42.857 0.00 0.00 42.00 3.13
7 8 5.438698 TTTATTACCGATGTGGAAAGGGA 57.561 39.130 0.00 0.00 42.00 4.20
9 10 6.935741 TGATTTATTACCGATGTGGAAAGG 57.064 37.500 0.00 0.00 42.00 3.11
10 11 9.273016 AGTATGATTTATTACCGATGTGGAAAG 57.727 33.333 0.00 0.00 42.00 2.62
12 13 9.621629 AAAGTATGATTTATTACCGATGTGGAA 57.378 29.630 0.00 0.00 42.00 3.53
14 15 9.273016 AGAAAGTATGATTTATTACCGATGTGG 57.727 33.333 0.00 0.00 46.41 4.17
34 35 7.971168 CGTCTTACATCATGAGACTAAGAAAGT 59.029 37.037 15.83 0.00 40.90 2.66
35 36 7.971168 ACGTCTTACATCATGAGACTAAGAAAG 59.029 37.037 15.83 14.96 40.90 2.62
36 37 7.827701 ACGTCTTACATCATGAGACTAAGAAA 58.172 34.615 15.83 0.49 40.90 2.52
37 38 7.392494 ACGTCTTACATCATGAGACTAAGAA 57.608 36.000 15.83 4.36 40.90 2.52
38 39 7.392494 AACGTCTTACATCATGAGACTAAGA 57.608 36.000 0.09 8.24 40.90 2.10
39 40 8.467402 AAAACGTCTTACATCATGAGACTAAG 57.533 34.615 0.09 6.09 40.90 2.18
40 41 8.827177 AAAAACGTCTTACATCATGAGACTAA 57.173 30.769 0.09 0.00 40.90 2.24
102 103 8.774586 CGATGAATAATTTAGAACGAAGGGAAT 58.225 33.333 0.00 0.00 0.00 3.01
103 104 7.254658 GCGATGAATAATTTAGAACGAAGGGAA 60.255 37.037 0.00 0.00 0.00 3.97
104 105 6.202188 GCGATGAATAATTTAGAACGAAGGGA 59.798 38.462 0.00 0.00 0.00 4.20
105 106 6.018262 TGCGATGAATAATTTAGAACGAAGGG 60.018 38.462 0.00 0.00 0.00 3.95
106 107 6.943981 TGCGATGAATAATTTAGAACGAAGG 58.056 36.000 0.00 0.00 0.00 3.46
107 108 7.841486 TCTGCGATGAATAATTTAGAACGAAG 58.159 34.615 0.00 0.00 0.00 3.79
108 109 7.764695 TCTGCGATGAATAATTTAGAACGAA 57.235 32.000 0.00 0.00 0.00 3.85
109 110 7.764695 TTCTGCGATGAATAATTTAGAACGA 57.235 32.000 0.00 0.00 0.00 3.85
110 111 8.886080 CATTTCTGCGATGAATAATTTAGAACG 58.114 33.333 0.00 0.00 0.00 3.95
111 112 9.173939 CCATTTCTGCGATGAATAATTTAGAAC 57.826 33.333 0.00 0.00 0.00 3.01
112 113 9.119418 TCCATTTCTGCGATGAATAATTTAGAA 57.881 29.630 0.00 0.00 0.00 2.10
113 114 8.675705 TCCATTTCTGCGATGAATAATTTAGA 57.324 30.769 0.00 0.00 0.00 2.10
114 115 9.338291 CATCCATTTCTGCGATGAATAATTTAG 57.662 33.333 0.00 0.00 34.55 1.85
115 116 8.849168 ACATCCATTTCTGCGATGAATAATTTA 58.151 29.630 3.44 0.00 35.42 1.40
116 117 7.719483 ACATCCATTTCTGCGATGAATAATTT 58.281 30.769 3.44 0.00 35.42 1.82
117 118 7.281040 ACATCCATTTCTGCGATGAATAATT 57.719 32.000 3.44 0.00 35.42 1.40
118 119 6.889301 ACATCCATTTCTGCGATGAATAAT 57.111 33.333 3.44 0.00 35.42 1.28
119 120 7.984422 ATACATCCATTTCTGCGATGAATAA 57.016 32.000 3.44 0.00 35.42 1.40
121 122 9.322773 CTATATACATCCATTTCTGCGATGAAT 57.677 33.333 3.44 0.00 35.42 2.57
122 123 8.531146 TCTATATACATCCATTTCTGCGATGAA 58.469 33.333 3.44 0.00 35.42 2.57
123 124 8.066612 TCTATATACATCCATTTCTGCGATGA 57.933 34.615 3.44 0.00 35.42 2.92
124 125 8.707938 TTCTATATACATCCATTTCTGCGATG 57.292 34.615 0.00 0.00 36.72 3.84
125 126 9.896645 AATTCTATATACATCCATTTCTGCGAT 57.103 29.630 0.00 0.00 0.00 4.58
156 157 9.921637 TCGCATGTATGAATGTATCTAAATGTA 57.078 29.630 0.00 0.00 0.00 2.29
157 158 8.712363 GTCGCATGTATGAATGTATCTAAATGT 58.288 33.333 0.00 0.00 0.00 2.71
158 159 8.711457 TGTCGCATGTATGAATGTATCTAAATG 58.289 33.333 0.00 0.00 0.00 2.32
159 160 8.831715 TGTCGCATGTATGAATGTATCTAAAT 57.168 30.769 0.00 0.00 0.00 1.40
160 161 8.655651 TTGTCGCATGTATGAATGTATCTAAA 57.344 30.769 0.00 0.00 0.00 1.85
161 162 7.926018 ACTTGTCGCATGTATGAATGTATCTAA 59.074 33.333 0.00 0.00 0.00 2.10
162 163 7.433680 ACTTGTCGCATGTATGAATGTATCTA 58.566 34.615 0.00 0.00 0.00 1.98
163 164 6.283694 ACTTGTCGCATGTATGAATGTATCT 58.716 36.000 0.00 0.00 0.00 1.98
164 165 6.530913 ACTTGTCGCATGTATGAATGTATC 57.469 37.500 0.00 0.00 0.00 2.24
165 166 8.607441 ATTACTTGTCGCATGTATGAATGTAT 57.393 30.769 0.00 0.00 0.00 2.29
166 167 8.432110 AATTACTTGTCGCATGTATGAATGTA 57.568 30.769 0.00 0.00 0.00 2.29
167 168 6.925610 ATTACTTGTCGCATGTATGAATGT 57.074 33.333 0.00 0.00 0.00 2.71
168 169 6.571154 CGAATTACTTGTCGCATGTATGAATG 59.429 38.462 0.00 0.00 0.00 2.67
169 170 6.292865 CCGAATTACTTGTCGCATGTATGAAT 60.293 38.462 0.00 0.00 35.93 2.57
170 171 5.006261 CCGAATTACTTGTCGCATGTATGAA 59.994 40.000 0.00 0.00 35.93 2.57
171 172 4.506288 CCGAATTACTTGTCGCATGTATGA 59.494 41.667 0.00 0.00 35.93 2.15
172 173 4.506288 TCCGAATTACTTGTCGCATGTATG 59.494 41.667 0.00 0.00 35.93 2.39
173 174 4.689071 TCCGAATTACTTGTCGCATGTAT 58.311 39.130 0.00 0.00 35.93 2.29
174 175 4.112716 TCCGAATTACTTGTCGCATGTA 57.887 40.909 0.00 2.87 35.93 2.29
175 176 2.967362 TCCGAATTACTTGTCGCATGT 58.033 42.857 0.00 4.39 35.93 3.21
176 177 4.335082 TTTCCGAATTACTTGTCGCATG 57.665 40.909 0.00 0.00 35.93 4.06
177 178 4.634004 TCATTTCCGAATTACTTGTCGCAT 59.366 37.500 0.00 0.00 35.93 4.73
178 179 3.997681 TCATTTCCGAATTACTTGTCGCA 59.002 39.130 0.00 0.00 35.93 5.10
179 180 4.494199 CCTCATTTCCGAATTACTTGTCGC 60.494 45.833 0.00 0.00 35.93 5.19
180 181 4.034048 CCCTCATTTCCGAATTACTTGTCG 59.966 45.833 0.00 0.00 37.01 4.35
181 182 5.183228 TCCCTCATTTCCGAATTACTTGTC 58.817 41.667 0.00 0.00 0.00 3.18
182 183 5.174037 TCCCTCATTTCCGAATTACTTGT 57.826 39.130 0.00 0.00 0.00 3.16
183 184 5.186198 ACTCCCTCATTTCCGAATTACTTG 58.814 41.667 0.00 0.00 0.00 3.16
184 185 5.437191 ACTCCCTCATTTCCGAATTACTT 57.563 39.130 0.00 0.00 0.00 2.24
185 186 5.897824 TCTACTCCCTCATTTCCGAATTACT 59.102 40.000 0.00 0.00 0.00 2.24
186 187 6.158023 TCTACTCCCTCATTTCCGAATTAC 57.842 41.667 0.00 0.00 0.00 1.89
187 188 6.579865 GTTCTACTCCCTCATTTCCGAATTA 58.420 40.000 0.00 0.00 0.00 1.40
188 189 5.429130 GTTCTACTCCCTCATTTCCGAATT 58.571 41.667 0.00 0.00 0.00 2.17
189 190 4.441634 CGTTCTACTCCCTCATTTCCGAAT 60.442 45.833 0.00 0.00 0.00 3.34
190 191 3.119245 CGTTCTACTCCCTCATTTCCGAA 60.119 47.826 0.00 0.00 0.00 4.30
191 192 2.426024 CGTTCTACTCCCTCATTTCCGA 59.574 50.000 0.00 0.00 0.00 4.55
192 193 2.481449 CCGTTCTACTCCCTCATTTCCG 60.481 54.545 0.00 0.00 0.00 4.30
193 194 2.764572 TCCGTTCTACTCCCTCATTTCC 59.235 50.000 0.00 0.00 0.00 3.13
194 195 3.181474 CCTCCGTTCTACTCCCTCATTTC 60.181 52.174 0.00 0.00 0.00 2.17
195 196 2.766828 CCTCCGTTCTACTCCCTCATTT 59.233 50.000 0.00 0.00 0.00 2.32
196 197 2.389715 CCTCCGTTCTACTCCCTCATT 58.610 52.381 0.00 0.00 0.00 2.57
197 198 1.411787 CCCTCCGTTCTACTCCCTCAT 60.412 57.143 0.00 0.00 0.00 2.90
198 199 0.033405 CCCTCCGTTCTACTCCCTCA 60.033 60.000 0.00 0.00 0.00 3.86
199 200 0.258194 TCCCTCCGTTCTACTCCCTC 59.742 60.000 0.00 0.00 0.00 4.30
200 201 0.259356 CTCCCTCCGTTCTACTCCCT 59.741 60.000 0.00 0.00 0.00 4.20
201 202 0.033306 ACTCCCTCCGTTCTACTCCC 60.033 60.000 0.00 0.00 0.00 4.30
202 203 2.725221 TACTCCCTCCGTTCTACTCC 57.275 55.000 0.00 0.00 0.00 3.85
203 204 4.261114 CGAATTACTCCCTCCGTTCTACTC 60.261 50.000 0.00 0.00 0.00 2.59
204 205 3.631227 CGAATTACTCCCTCCGTTCTACT 59.369 47.826 0.00 0.00 0.00 2.57
205 206 3.379688 ACGAATTACTCCCTCCGTTCTAC 59.620 47.826 0.00 0.00 0.00 2.59
206 207 3.624777 ACGAATTACTCCCTCCGTTCTA 58.375 45.455 0.00 0.00 0.00 2.10
207 208 2.454538 ACGAATTACTCCCTCCGTTCT 58.545 47.619 0.00 0.00 0.00 3.01
208 209 2.955477 ACGAATTACTCCCTCCGTTC 57.045 50.000 0.00 0.00 0.00 3.95
209 210 3.379688 GTCTACGAATTACTCCCTCCGTT 59.620 47.826 0.00 0.00 0.00 4.44
210 211 2.948315 GTCTACGAATTACTCCCTCCGT 59.052 50.000 0.00 0.00 0.00 4.69
211 212 2.032204 CGTCTACGAATTACTCCCTCCG 60.032 54.545 0.00 0.00 43.02 4.63
212 213 3.209410 TCGTCTACGAATTACTCCCTCC 58.791 50.000 2.10 0.00 46.30 4.30
225 226 6.020916 ACACATTTTTATCACGATCGTCTACG 60.021 38.462 19.84 7.44 41.45 3.51
226 227 7.111139 CACACATTTTTATCACGATCGTCTAC 58.889 38.462 19.84 0.00 0.00 2.59
227 228 6.237728 GCACACATTTTTATCACGATCGTCTA 60.238 38.462 19.84 10.20 0.00 2.59
228 229 5.445939 GCACACATTTTTATCACGATCGTCT 60.446 40.000 19.84 11.40 0.00 4.18
229 230 4.723862 GCACACATTTTTATCACGATCGTC 59.276 41.667 19.84 0.00 0.00 4.20
230 231 4.153296 TGCACACATTTTTATCACGATCGT 59.847 37.500 16.60 16.60 0.00 3.73
231 232 4.491942 GTGCACACATTTTTATCACGATCG 59.508 41.667 14.88 14.88 0.00 3.69
232 233 5.509272 CAGTGCACACATTTTTATCACGATC 59.491 40.000 21.04 0.00 0.00 3.69
233 234 5.181056 TCAGTGCACACATTTTTATCACGAT 59.819 36.000 21.04 0.00 0.00 3.73
234 235 4.513318 TCAGTGCACACATTTTTATCACGA 59.487 37.500 21.04 0.00 0.00 4.35
235 236 4.612614 GTCAGTGCACACATTTTTATCACG 59.387 41.667 21.04 0.00 0.00 4.35
236 237 5.518812 TGTCAGTGCACACATTTTTATCAC 58.481 37.500 21.04 0.00 0.00 3.06
237 238 5.764487 TGTCAGTGCACACATTTTTATCA 57.236 34.783 21.04 0.72 0.00 2.15
238 239 5.509272 CGATGTCAGTGCACACATTTTTATC 59.491 40.000 21.04 7.78 33.22 1.75
239 240 5.048782 ACGATGTCAGTGCACACATTTTTAT 60.049 36.000 21.04 0.00 33.22 1.40
240 241 4.274705 ACGATGTCAGTGCACACATTTTTA 59.725 37.500 21.04 0.00 33.22 1.52
241 242 3.066621 ACGATGTCAGTGCACACATTTTT 59.933 39.130 21.04 6.53 33.22 1.94
242 243 2.618241 ACGATGTCAGTGCACACATTTT 59.382 40.909 21.04 8.84 33.22 1.82
243 244 2.221169 ACGATGTCAGTGCACACATTT 58.779 42.857 21.04 9.17 33.22 2.32
244 245 1.800586 GACGATGTCAGTGCACACATT 59.199 47.619 21.04 6.89 33.22 2.71
245 246 1.432514 GACGATGTCAGTGCACACAT 58.567 50.000 21.04 20.17 35.88 3.21
248 249 1.372872 CCGACGATGTCAGTGCACA 60.373 57.895 21.04 0.00 32.09 4.57
274 275 3.790416 TAGGGGATTGGCATGCCGC 62.790 63.158 30.87 21.68 41.98 6.53
275 276 1.898574 GTAGGGGATTGGCATGCCG 60.899 63.158 30.87 0.00 41.98 5.69
276 277 1.531602 GGTAGGGGATTGGCATGCC 60.532 63.158 30.54 30.54 40.28 4.40
281 282 2.192175 CCACGGTAGGGGATTGGC 59.808 66.667 0.00 0.00 46.39 4.52
283 284 2.203015 CGCCACGGTAGGGGATTG 60.203 66.667 7.56 0.00 46.39 2.67
1164 1188 3.785859 ATCATCGCCCTGCACCGT 61.786 61.111 0.00 0.00 0.00 4.83
1218 1242 1.352622 ACACCTTCCACTTGCCCTCA 61.353 55.000 0.00 0.00 0.00 3.86
1482 1506 3.244770 TGGCTTTGTTACCCTTCCTGTAG 60.245 47.826 0.00 0.00 0.00 2.74
1514 1538 4.101448 CCACCTCCTTCGGGGCTG 62.101 72.222 0.00 0.00 35.37 4.85
1515 1539 4.332543 TCCACCTCCTTCGGGGCT 62.333 66.667 0.00 0.00 35.37 5.19
1519 1543 2.060980 CCTCCTCCACCTCCTTCGG 61.061 68.421 0.00 0.00 0.00 4.30
1521 1545 1.081277 ACCCTCCTCCACCTCCTTC 59.919 63.158 0.00 0.00 0.00 3.46
1578 1608 1.894282 GCGGCCCCTCTTCTTATGC 60.894 63.158 0.00 0.00 0.00 3.14
1580 1610 0.181350 CTTGCGGCCCCTCTTCTTAT 59.819 55.000 0.00 0.00 0.00 1.73
1627 1657 1.344763 CTCCACCGAGTTCTTCACCTT 59.655 52.381 0.00 0.00 0.00 3.50
1633 1663 0.977395 CCCTTCTCCACCGAGTTCTT 59.023 55.000 0.00 0.00 37.40 2.52
1656 1686 4.034258 CCTGTGCCTGCTGTTGCG 62.034 66.667 0.00 0.00 43.34 4.85
1661 1691 2.050350 CCATTCCCTGTGCCTGCTG 61.050 63.158 0.00 0.00 0.00 4.41
1669 1699 1.304713 CTGCTTGCCCATTCCCTGT 60.305 57.895 0.00 0.00 0.00 4.00
1673 1703 0.034089 AGGTACTGCTTGCCCATTCC 60.034 55.000 0.00 0.00 37.18 3.01
1689 1719 2.770232 CCCCAAATTCTCCGTACTAGGT 59.230 50.000 0.00 0.00 0.00 3.08
1733 1763 1.821753 ACTCGACATCCTTCTCCACAG 59.178 52.381 0.00 0.00 0.00 3.66
1736 1766 2.095461 CAGACTCGACATCCTTCTCCA 58.905 52.381 0.00 0.00 0.00 3.86
1773 1803 1.351017 TCCTCCACCTCAACATGTTCC 59.649 52.381 8.48 0.00 0.00 3.62
1852 1882 4.088634 TCCTTTTCCATTTCACCCTCATG 58.911 43.478 0.00 0.00 0.00 3.07
1941 1971 1.372872 CGTCGACACACATGCCTGA 60.373 57.895 17.16 0.00 0.00 3.86
2058 2088 1.839424 AGTGATTTACCTTGGCAGGC 58.161 50.000 3.31 0.00 45.56 4.85
2061 2091 3.153919 GTGGAAGTGATTTACCTTGGCA 58.846 45.455 0.00 0.00 0.00 4.92
2085 2115 2.373224 TCACCATCACAACAAACAGCA 58.627 42.857 0.00 0.00 0.00 4.41
2146 2176 5.654603 ACATCGTATTCTACAGTCCACAA 57.345 39.130 0.00 0.00 0.00 3.33
2161 2191 4.500887 GCAATGAGGCCTACTTACATCGTA 60.501 45.833 4.42 0.00 0.00 3.43
2163 2193 2.802816 GCAATGAGGCCTACTTACATCG 59.197 50.000 4.42 0.00 0.00 3.84
2164 2194 4.078639 AGCAATGAGGCCTACTTACATC 57.921 45.455 4.42 0.00 0.00 3.06
2196 2226 5.885230 TTCTGAAATGAGCAAGTATGTGG 57.115 39.130 0.00 0.00 0.00 4.17
2254 2286 4.269844 GCAACACACATTGGTAAAAACAGG 59.730 41.667 0.00 0.00 0.00 4.00
2255 2287 4.867047 TGCAACACACATTGGTAAAAACAG 59.133 37.500 0.00 0.00 0.00 3.16
2256 2288 4.820897 TGCAACACACATTGGTAAAAACA 58.179 34.783 0.00 0.00 0.00 2.83
2257 2289 5.982465 ATGCAACACACATTGGTAAAAAC 57.018 34.783 0.00 0.00 0.00 2.43
2258 2290 9.579768 GATATATGCAACACACATTGGTAAAAA 57.420 29.630 0.00 0.00 0.00 1.94
2259 2291 8.743714 TGATATATGCAACACACATTGGTAAAA 58.256 29.630 0.00 0.00 0.00 1.52
2260 2292 8.286191 TGATATATGCAACACACATTGGTAAA 57.714 30.769 0.00 0.00 0.00 2.01
2268 2300 5.096443 TGTCCTGATATATGCAACACACA 57.904 39.130 0.00 0.00 0.00 3.72
2299 2331 5.063204 CCCAGACACTTGAACATTCTAACA 58.937 41.667 0.00 0.00 0.00 2.41
2311 2343 1.369625 GCCGATTACCCAGACACTTG 58.630 55.000 0.00 0.00 0.00 3.16
2328 2360 6.369065 CGATTACTTTCAGTTGATATAGGGCC 59.631 42.308 0.00 0.00 0.00 5.80
2401 2433 6.668323 ACAATCTAAAATGGACAAGAACACG 58.332 36.000 0.00 0.00 0.00 4.49
2410 2442 5.357878 TGGCATGAGACAATCTAAAATGGAC 59.642 40.000 0.00 0.00 0.00 4.02
2457 2489 3.133003 AGAAATCTACCTCCATCACCACG 59.867 47.826 0.00 0.00 0.00 4.94
2459 2491 4.104086 ACAGAAATCTACCTCCATCACCA 58.896 43.478 0.00 0.00 0.00 4.17
2539 2571 1.844771 GAACACAGTGATGCAGCGCA 61.845 55.000 18.92 5.73 44.86 6.09
2542 2574 2.663879 CGAAAGAACACAGTGATGCAGC 60.664 50.000 7.81 0.00 0.00 5.25
2549 2581 3.604772 GCTAACAGCGAAAGAACACAGTG 60.605 47.826 0.00 0.00 0.00 3.66
2579 2611 6.645884 TGGATAACTAACCACCCACTTAAT 57.354 37.500 0.00 0.00 0.00 1.40
2580 2612 6.451292 TTGGATAACTAACCACCCACTTAA 57.549 37.500 0.00 0.00 35.81 1.85
2581 2613 6.215841 TCATTGGATAACTAACCACCCACTTA 59.784 38.462 0.00 0.00 35.81 2.24
2582 2614 5.014755 TCATTGGATAACTAACCACCCACTT 59.985 40.000 0.00 0.00 35.81 3.16
2583 2615 4.538490 TCATTGGATAACTAACCACCCACT 59.462 41.667 0.00 0.00 35.81 4.00
2584 2616 4.850680 TCATTGGATAACTAACCACCCAC 58.149 43.478 0.00 0.00 35.81 4.61
2585 2617 5.522315 TTCATTGGATAACTAACCACCCA 57.478 39.130 0.00 0.00 35.81 4.51
2587 2619 7.696992 TTCTTTCATTGGATAACTAACCACC 57.303 36.000 0.00 0.00 35.81 4.61
2588 2620 9.974980 TTTTTCTTTCATTGGATAACTAACCAC 57.025 29.630 0.00 0.00 35.81 4.16
2595 2627 9.087424 GCTACCATTTTTCTTTCATTGGATAAC 57.913 33.333 0.00 0.00 0.00 1.89
2596 2628 8.811017 TGCTACCATTTTTCTTTCATTGGATAA 58.189 29.630 0.00 0.00 0.00 1.75
2597 2629 8.250332 GTGCTACCATTTTTCTTTCATTGGATA 58.750 33.333 0.00 0.00 0.00 2.59
2598 2630 7.038799 AGTGCTACCATTTTTCTTTCATTGGAT 60.039 33.333 0.00 0.00 0.00 3.41
2599 2631 6.267471 AGTGCTACCATTTTTCTTTCATTGGA 59.733 34.615 0.00 0.00 0.00 3.53
2600 2632 6.458210 AGTGCTACCATTTTTCTTTCATTGG 58.542 36.000 0.00 0.00 0.00 3.16
2601 2633 7.147312 TGAGTGCTACCATTTTTCTTTCATTG 58.853 34.615 0.00 0.00 0.00 2.82
2602 2634 7.014615 ACTGAGTGCTACCATTTTTCTTTCATT 59.985 33.333 0.00 0.00 0.00 2.57
2603 2635 6.491403 ACTGAGTGCTACCATTTTTCTTTCAT 59.509 34.615 0.00 0.00 0.00 2.57
2604 2636 5.827797 ACTGAGTGCTACCATTTTTCTTTCA 59.172 36.000 0.00 0.00 0.00 2.69
2605 2637 6.319141 ACTGAGTGCTACCATTTTTCTTTC 57.681 37.500 0.00 0.00 0.00 2.62
2606 2638 6.461509 CCAACTGAGTGCTACCATTTTTCTTT 60.462 38.462 0.00 0.00 0.00 2.52
2607 2639 5.010012 CCAACTGAGTGCTACCATTTTTCTT 59.990 40.000 0.00 0.00 0.00 2.52
2608 2640 4.520492 CCAACTGAGTGCTACCATTTTTCT 59.480 41.667 0.00 0.00 0.00 2.52
2609 2641 4.278419 ACCAACTGAGTGCTACCATTTTTC 59.722 41.667 0.00 0.00 0.00 2.29
2610 2642 4.037923 CACCAACTGAGTGCTACCATTTTT 59.962 41.667 0.00 0.00 0.00 1.94
2611 2643 3.569701 CACCAACTGAGTGCTACCATTTT 59.430 43.478 0.00 0.00 0.00 1.82
2612 2644 3.149196 CACCAACTGAGTGCTACCATTT 58.851 45.455 0.00 0.00 0.00 2.32
2613 2645 2.106511 ACACCAACTGAGTGCTACCATT 59.893 45.455 0.00 0.00 38.87 3.16
2614 2646 1.699634 ACACCAACTGAGTGCTACCAT 59.300 47.619 0.00 0.00 38.87 3.55
2615 2647 1.070134 GACACCAACTGAGTGCTACCA 59.930 52.381 0.00 0.00 38.87 3.25
2616 2648 1.344763 AGACACCAACTGAGTGCTACC 59.655 52.381 0.00 0.00 38.87 3.18
2617 2649 2.821991 AGACACCAACTGAGTGCTAC 57.178 50.000 0.00 0.00 38.87 3.58
2618 2650 5.221641 ACAATTAGACACCAACTGAGTGCTA 60.222 40.000 0.00 0.00 38.87 3.49
2619 2651 4.067896 CAATTAGACACCAACTGAGTGCT 58.932 43.478 0.00 0.00 38.87 4.40
2620 2652 3.815401 ACAATTAGACACCAACTGAGTGC 59.185 43.478 0.00 0.00 38.87 4.40
2621 2653 5.056480 TGACAATTAGACACCAACTGAGTG 58.944 41.667 0.00 0.00 41.15 3.51
2622 2654 5.290493 TGACAATTAGACACCAACTGAGT 57.710 39.130 0.00 0.00 0.00 3.41
2623 2655 6.169094 AGATGACAATTAGACACCAACTGAG 58.831 40.000 0.00 0.00 0.00 3.35
2624 2656 6.114187 AGATGACAATTAGACACCAACTGA 57.886 37.500 0.00 0.00 0.00 3.41
2625 2657 5.934043 TGAGATGACAATTAGACACCAACTG 59.066 40.000 0.00 0.00 0.00 3.16
2626 2658 5.934625 GTGAGATGACAATTAGACACCAACT 59.065 40.000 0.00 0.00 0.00 3.16
2627 2659 5.934625 AGTGAGATGACAATTAGACACCAAC 59.065 40.000 0.00 0.00 0.00 3.77
2628 2660 5.934043 CAGTGAGATGACAATTAGACACCAA 59.066 40.000 0.00 0.00 0.00 3.67
2629 2661 5.012046 ACAGTGAGATGACAATTAGACACCA 59.988 40.000 0.00 0.00 0.00 4.17
2630 2662 5.482908 ACAGTGAGATGACAATTAGACACC 58.517 41.667 0.00 0.00 0.00 4.16
2631 2663 6.159293 TGACAGTGAGATGACAATTAGACAC 58.841 40.000 0.00 0.00 0.00 3.67
2632 2664 6.345096 TGACAGTGAGATGACAATTAGACA 57.655 37.500 0.00 0.00 0.00 3.41
2633 2665 5.809562 CCTGACAGTGAGATGACAATTAGAC 59.190 44.000 0.00 0.00 0.00 2.59
2634 2666 5.716703 TCCTGACAGTGAGATGACAATTAGA 59.283 40.000 0.00 0.00 0.00 2.10
2635 2667 5.809562 GTCCTGACAGTGAGATGACAATTAG 59.190 44.000 0.00 0.00 0.00 1.73
2636 2668 5.481824 AGTCCTGACAGTGAGATGACAATTA 59.518 40.000 0.00 0.00 0.00 1.40
2637 2669 4.285517 AGTCCTGACAGTGAGATGACAATT 59.714 41.667 0.00 0.00 0.00 2.32
2638 2670 3.837146 AGTCCTGACAGTGAGATGACAAT 59.163 43.478 0.00 0.00 0.00 2.71
2639 2671 3.234353 AGTCCTGACAGTGAGATGACAA 58.766 45.455 0.00 0.00 0.00 3.18
2640 2672 2.822561 GAGTCCTGACAGTGAGATGACA 59.177 50.000 0.00 0.00 0.00 3.58
2641 2673 2.822561 TGAGTCCTGACAGTGAGATGAC 59.177 50.000 0.00 0.69 0.00 3.06
2642 2674 2.822561 GTGAGTCCTGACAGTGAGATGA 59.177 50.000 0.00 0.00 0.00 2.92
2643 2675 2.560105 TGTGAGTCCTGACAGTGAGATG 59.440 50.000 0.00 0.00 0.00 2.90
2651 2683 2.316108 TGTAGCTTGTGAGTCCTGACA 58.684 47.619 0.00 0.00 0.00 3.58
2677 2709 3.243201 TGCGAGTATGTATGAGACTGCAG 60.243 47.826 13.48 13.48 31.03 4.41
2682 2714 9.586150 CAATTTATTTGCGAGTATGTATGAGAC 57.414 33.333 0.00 0.00 0.00 3.36
2684 2716 7.535258 GCCAATTTATTTGCGAGTATGTATGAG 59.465 37.037 0.00 0.00 33.73 2.90
2694 2726 3.508744 AGGTGCCAATTTATTTGCGAG 57.491 42.857 0.00 0.00 33.73 5.03
2696 2728 4.690280 AGAAAAGGTGCCAATTTATTTGCG 59.310 37.500 0.00 0.00 33.73 4.85
2700 2732 7.732222 TCCATAGAAAAGGTGCCAATTTATT 57.268 32.000 0.00 0.00 0.00 1.40
2718 2750 7.741027 AAGCACATGACAATATCTTCCATAG 57.259 36.000 0.00 0.00 0.00 2.23
2725 2757 5.636903 ACCCTAAGCACATGACAATATCT 57.363 39.130 0.00 0.00 0.00 1.98
2726 2758 5.009010 CCAACCCTAAGCACATGACAATATC 59.991 44.000 0.00 0.00 0.00 1.63
2742 2774 2.317040 CGAGATTAGGCTCCAACCCTA 58.683 52.381 0.00 0.00 33.88 3.53
2794 2828 7.523415 TCCTTTTACCCCAACCATCTATATTC 58.477 38.462 0.00 0.00 0.00 1.75
2795 2829 7.474474 TCCTTTTACCCCAACCATCTATATT 57.526 36.000 0.00 0.00 0.00 1.28
2803 2837 1.481615 GCCTTCCTTTTACCCCAACCA 60.482 52.381 0.00 0.00 0.00 3.67
2806 2840 3.770046 GTAAGCCTTCCTTTTACCCCAA 58.230 45.455 0.00 0.00 34.95 4.12
2816 2850 2.158943 GCCTTATGTCGTAAGCCTTCCT 60.159 50.000 6.33 0.00 38.78 3.36
2817 2851 2.210961 GCCTTATGTCGTAAGCCTTCC 58.789 52.381 6.33 0.00 38.78 3.46
2818 2852 2.901249 TGCCTTATGTCGTAAGCCTTC 58.099 47.619 6.33 0.00 38.78 3.46
2822 2856 2.006888 TGCTTGCCTTATGTCGTAAGC 58.993 47.619 6.33 0.00 38.78 3.09
2823 2857 3.262420 AGTGCTTGCCTTATGTCGTAAG 58.738 45.455 5.00 5.00 39.63 2.34
2824 2858 3.328382 AGTGCTTGCCTTATGTCGTAA 57.672 42.857 0.00 0.00 0.00 3.18
2825 2859 4.178540 GTTAGTGCTTGCCTTATGTCGTA 58.821 43.478 0.00 0.00 0.00 3.43
2826 2860 3.000727 GTTAGTGCTTGCCTTATGTCGT 58.999 45.455 0.00 0.00 0.00 4.34
2827 2861 3.000041 TGTTAGTGCTTGCCTTATGTCG 59.000 45.455 0.00 0.00 0.00 4.35
2828 2862 5.048713 AGTTTGTTAGTGCTTGCCTTATGTC 60.049 40.000 0.00 0.00 0.00 3.06
2829 2863 4.827284 AGTTTGTTAGTGCTTGCCTTATGT 59.173 37.500 0.00 0.00 0.00 2.29
2872 2906 1.187087 CACGATAGCCTAGGGGATCC 58.813 60.000 11.72 1.92 42.67 3.36
2889 2923 1.946745 GCCTACTGCTTGATCCTCAC 58.053 55.000 0.00 0.00 36.87 3.51
2904 2938 2.174685 TGATAAGGACAGGCAGCCTA 57.825 50.000 15.64 0.00 33.20 3.93
2907 2941 2.357009 CACAATGATAAGGACAGGCAGC 59.643 50.000 0.00 0.00 0.00 5.25
2908 2942 2.357009 GCACAATGATAAGGACAGGCAG 59.643 50.000 0.00 0.00 0.00 4.85
2909 2943 2.368439 GCACAATGATAAGGACAGGCA 58.632 47.619 0.00 0.00 0.00 4.75
2910 2944 1.678101 GGCACAATGATAAGGACAGGC 59.322 52.381 0.00 0.00 0.00 4.85
2911 2945 2.947652 CAGGCACAATGATAAGGACAGG 59.052 50.000 0.00 0.00 0.00 4.00
2912 2946 2.357009 GCAGGCACAATGATAAGGACAG 59.643 50.000 0.00 0.00 0.00 3.51
2966 3000 5.912955 GTGGCTACACAAATGAAGTAACAAC 59.087 40.000 0.00 0.00 46.90 3.32
2967 3001 6.067263 GTGGCTACACAAATGAAGTAACAA 57.933 37.500 0.00 0.00 46.90 2.83
3020 3054 6.674760 GCGGGTACATAGTGAACATTTTCTTC 60.675 42.308 0.00 0.00 32.36 2.87
3022 3056 4.634443 GCGGGTACATAGTGAACATTTTCT 59.366 41.667 0.00 0.00 32.36 2.52
3027 3061 3.838244 ATGCGGGTACATAGTGAACAT 57.162 42.857 0.00 0.00 0.00 2.71
3036 3070 3.953612 ACATCAATGAAATGCGGGTACAT 59.046 39.130 0.00 0.00 0.00 2.29
3060 3101 5.130477 CCAGCCCCATAGAAGTTAAGAGTTA 59.870 44.000 0.00 0.00 0.00 2.24
3066 3107 4.043561 TGAAACCAGCCCCATAGAAGTTAA 59.956 41.667 0.00 0.00 0.00 2.01
3067 3108 3.589735 TGAAACCAGCCCCATAGAAGTTA 59.410 43.478 0.00 0.00 0.00 2.24
3075 3116 0.482446 TCTGTTGAAACCAGCCCCAT 59.518 50.000 0.00 0.00 0.00 4.00
3095 3136 5.046304 AGGCAACAAGAAGAGCTACAGATAA 60.046 40.000 0.00 0.00 41.41 1.75
3098 3139 2.634940 AGGCAACAAGAAGAGCTACAGA 59.365 45.455 0.00 0.00 41.41 3.41
3099 3140 3.051081 AGGCAACAAGAAGAGCTACAG 57.949 47.619 0.00 0.00 41.41 2.74
3122 3164 8.863049 CCACAAATCACATAAAATTAGTTCAGC 58.137 33.333 0.00 0.00 0.00 4.26
3131 3173 6.432403 AACCACCCACAAATCACATAAAAT 57.568 33.333 0.00 0.00 0.00 1.82
3135 3177 4.219115 ACAAACCACCCACAAATCACATA 58.781 39.130 0.00 0.00 0.00 2.29
3136 3178 3.037549 ACAAACCACCCACAAATCACAT 58.962 40.909 0.00 0.00 0.00 3.21
3137 3179 2.461695 ACAAACCACCCACAAATCACA 58.538 42.857 0.00 0.00 0.00 3.58
3138 3180 3.634910 AGTACAAACCACCCACAAATCAC 59.365 43.478 0.00 0.00 0.00 3.06
3139 3181 3.904717 AGTACAAACCACCCACAAATCA 58.095 40.909 0.00 0.00 0.00 2.57
3140 3182 4.929819 AAGTACAAACCACCCACAAATC 57.070 40.909 0.00 0.00 0.00 2.17
3141 3183 4.585581 GGTAAGTACAAACCACCCACAAAT 59.414 41.667 10.83 0.00 35.73 2.32
3142 3184 3.952967 GGTAAGTACAAACCACCCACAAA 59.047 43.478 10.83 0.00 35.73 2.83
3147 3196 2.372837 TGGAGGTAAGTACAAACCACCC 59.627 50.000 22.01 18.50 43.61 4.61
3154 3203 4.425180 TGCAAAGTGGAGGTAAGTACAA 57.575 40.909 0.00 0.00 0.00 2.41
3163 3212 2.301346 ACAAGAGTTGCAAAGTGGAGG 58.699 47.619 0.00 0.00 0.00 4.30
3176 3225 9.672673 ATTAGAATTGTGTTAGCATACAAGAGT 57.327 29.630 0.00 0.00 39.83 3.24
3198 3247 7.540400 CGAGATACAGCAGGTCAGATAAATTAG 59.460 40.741 0.00 0.00 0.00 1.73
3199 3248 7.014326 ACGAGATACAGCAGGTCAGATAAATTA 59.986 37.037 0.00 0.00 0.00 1.40
3201 3250 5.303078 ACGAGATACAGCAGGTCAGATAAAT 59.697 40.000 0.00 0.00 0.00 1.40
3205 3254 2.621055 GACGAGATACAGCAGGTCAGAT 59.379 50.000 0.00 0.00 0.00 2.90
3215 3264 4.443725 GCACATTCATGAGACGAGATACAG 59.556 45.833 0.00 0.00 0.00 2.74
3223 3272 6.139638 CGAATAATTTGCACATTCATGAGACG 59.860 38.462 0.33 0.00 0.00 4.18
3224 3273 7.188834 TCGAATAATTTGCACATTCATGAGAC 58.811 34.615 0.33 0.00 0.00 3.36
3238 3298 6.853279 ACGCTTGTTGATTCGAATAATTTG 57.147 33.333 11.38 1.78 0.00 2.32
3245 3305 5.201910 CAAGTTAACGCTTGTTGATTCGAA 58.798 37.500 0.00 0.00 40.52 3.71
3247 3307 3.357823 GCAAGTTAACGCTTGTTGATTCG 59.642 43.478 8.31 0.00 45.47 3.34
3252 3312 2.604614 GGAGGCAAGTTAACGCTTGTTG 60.605 50.000 8.78 5.18 45.47 3.33
3260 3320 7.625828 AACTAATACATGGAGGCAAGTTAAC 57.374 36.000 0.00 0.00 0.00 2.01
3345 3406 0.883833 CGGCTGCCAAGAACAAGAAT 59.116 50.000 20.29 0.00 0.00 2.40
3376 3437 4.955925 TTGCTTCTCAAGACGTTTTGAA 57.044 36.364 20.48 7.81 36.69 2.69
3379 3440 6.136541 AGATTTTGCTTCTCAAGACGTTTT 57.863 33.333 0.00 0.00 35.84 2.43
3404 3465 8.040727 ACACAAGCTTACCTTCTTTTCATTTTT 58.959 29.630 0.00 0.00 0.00 1.94
3422 3483 3.523606 TGAACATTTTGCACACAAGCT 57.476 38.095 0.00 0.00 37.04 3.74
3423 3484 4.799419 ATTGAACATTTTGCACACAAGC 57.201 36.364 0.00 0.00 37.04 4.01
3424 3485 6.109320 ACAATTGAACATTTTGCACACAAG 57.891 33.333 13.59 0.00 37.04 3.16
3425 3486 7.601073 TTACAATTGAACATTTTGCACACAA 57.399 28.000 13.59 0.00 0.00 3.33
3426 3487 7.493645 TCATTACAATTGAACATTTTGCACACA 59.506 29.630 13.59 0.00 0.00 3.72
3427 3488 7.849496 TCATTACAATTGAACATTTTGCACAC 58.151 30.769 13.59 0.00 0.00 3.82
3428 3489 8.604640 ATCATTACAATTGAACATTTTGCACA 57.395 26.923 13.59 0.00 0.00 4.57
3453 3514 7.148086 ACACTTGCAGAGAAAAAGTCAAACATA 60.148 33.333 3.37 0.00 31.88 2.29
3454 3515 6.038356 CACTTGCAGAGAAAAAGTCAAACAT 58.962 36.000 3.37 0.00 31.88 2.71
3456 3517 5.402398 ACACTTGCAGAGAAAAAGTCAAAC 58.598 37.500 3.37 0.00 31.88 2.93
3475 3537 5.683876 ACAAGTATCTCCTATGCAACACT 57.316 39.130 0.00 0.00 0.00 3.55
3476 3538 6.371548 TCAAACAAGTATCTCCTATGCAACAC 59.628 38.462 0.00 0.00 0.00 3.32
3493 3555 8.545229 AGATTCATACAGAGAACTCAAACAAG 57.455 34.615 4.64 0.00 0.00 3.16
3553 3615 8.112183 ACTCACAGAATTCATTATTCCCTTTCT 58.888 33.333 8.44 0.00 43.08 2.52
3554 3616 8.286191 ACTCACAGAATTCATTATTCCCTTTC 57.714 34.615 8.44 0.00 43.08 2.62
3569 3631 7.040409 GGAAGAAATGGTGTAAACTCACAGAAT 60.040 37.037 0.00 0.00 39.76 2.40
3603 3665 8.812329 GCCGTTTCAAATATGCAAATGTAATAA 58.188 29.630 0.00 0.00 0.00 1.40
3605 3667 6.257630 GGCCGTTTCAAATATGCAAATGTAAT 59.742 34.615 0.00 0.00 0.00 1.89
3606 3668 5.578727 GGCCGTTTCAAATATGCAAATGTAA 59.421 36.000 0.00 0.00 0.00 2.41
3609 3671 3.931468 TGGCCGTTTCAAATATGCAAATG 59.069 39.130 0.00 0.00 0.00 2.32
3610 3672 4.199432 TGGCCGTTTCAAATATGCAAAT 57.801 36.364 0.00 0.00 0.00 2.32
3616 3678 6.959639 ATAGTGAATGGCCGTTTCAAATAT 57.040 33.333 19.28 16.76 35.03 1.28
3625 3761 4.150897 ACATGTTATAGTGAATGGCCGT 57.849 40.909 0.00 0.00 0.00 5.68
3627 3763 7.928307 ATCATACATGTTATAGTGAATGGCC 57.072 36.000 2.30 0.00 0.00 5.36
3628 3764 8.786898 ACAATCATACATGTTATAGTGAATGGC 58.213 33.333 2.30 0.00 0.00 4.40
3644 3780 7.178573 TGGACAATAGGGAAAACAATCATACA 58.821 34.615 0.00 0.00 0.00 2.29
3657 3793 1.008327 TCTCAGGCTGGACAATAGGGA 59.992 52.381 15.73 0.00 0.00 4.20
3662 3798 3.840666 TCTTTACTCTCAGGCTGGACAAT 59.159 43.478 15.73 0.00 0.00 2.71
3787 3923 7.959689 AGCATAGCTGACATAAAACTCATAG 57.040 36.000 0.00 0.00 37.57 2.23
3873 4009 5.517322 AGAACATACATAAGACCGAGACC 57.483 43.478 0.00 0.00 0.00 3.85
3874 4010 8.404000 TCTTTAGAACATACATAAGACCGAGAC 58.596 37.037 0.00 0.00 0.00 3.36
3881 4017 7.676683 AGCCCTCTTTAGAACATACATAAGA 57.323 36.000 0.00 0.00 0.00 2.10
3904 4040 5.940470 AGCAGTAACACTTTTAGGATGGAAG 59.060 40.000 0.00 0.00 0.00 3.46
3909 4045 4.938226 GCTCAGCAGTAACACTTTTAGGAT 59.062 41.667 0.00 0.00 0.00 3.24
3910 4046 4.315803 GCTCAGCAGTAACACTTTTAGGA 58.684 43.478 0.00 0.00 0.00 2.94
3920 4056 3.315191 TGTTTCTTTGGCTCAGCAGTAAC 59.685 43.478 0.00 0.00 0.00 2.50
3928 4064 1.333619 GCTCGTTGTTTCTTTGGCTCA 59.666 47.619 0.00 0.00 0.00 4.26
3954 4090 0.034756 TGCTTCGCAGCCAGTTCTTA 59.965 50.000 4.17 0.00 46.74 2.10
3967 4103 3.317150 TCTAACAGTCATGTGTGCTTCG 58.683 45.455 0.00 0.00 40.39 3.79
3987 4123 5.696724 ACATATTTGCCGCTAGTAGTGATTC 59.303 40.000 12.41 2.11 0.00 2.52
4012 4148 2.247358 TCAGCCACATACTCAGTCACA 58.753 47.619 0.00 0.00 0.00 3.58
4018 4154 6.423776 TGATTATGATCAGCCACATACTCA 57.576 37.500 0.09 0.00 37.37 3.41
4057 4193 6.409704 TCTAAGAATCTGAATGTCCACCAAG 58.590 40.000 0.00 0.00 0.00 3.61
4058 4194 6.373005 TCTAAGAATCTGAATGTCCACCAA 57.627 37.500 0.00 0.00 0.00 3.67
4078 4214 9.944376 AACTTTGCTAATAACTTCTGTGATCTA 57.056 29.630 0.00 0.00 0.00 1.98
4117 4253 5.017294 TCAAAACAACTTTTGGTGGATCC 57.983 39.130 4.20 4.20 44.46 3.36
4162 4298 2.410785 TCGTGTGTCTTGTCCTTACG 57.589 50.000 0.00 0.00 0.00 3.18
4165 4301 1.760613 TCCTTCGTGTGTCTTGTCCTT 59.239 47.619 0.00 0.00 0.00 3.36
4174 4310 3.872696 TGATTGCATATCCTTCGTGTGT 58.127 40.909 0.00 0.00 0.00 3.72
4182 4318 2.708051 CATCGCCTGATTGCATATCCT 58.292 47.619 0.00 0.00 30.49 3.24
4206 4342 8.055181 TCCTCTGTAAATATTCAGAAATTGCCT 58.945 33.333 7.91 0.00 39.67 4.75
4377 4513 6.515272 ACAAAGGCCTACAATAATCACTTG 57.485 37.500 5.16 4.59 0.00 3.16
4397 4533 6.071334 TGGTTAACTCCAATGAACAACAACAA 60.071 34.615 5.42 0.00 34.24 2.83
4519 4655 0.798776 CTGTTCTTGGCTGCTTACCG 59.201 55.000 0.00 0.00 0.00 4.02
4522 4658 3.951037 TCAAAACTGTTCTTGGCTGCTTA 59.049 39.130 0.00 0.00 0.00 3.09
4600 4736 0.445436 GCAACAGTGAGAAGCGATGG 59.555 55.000 0.00 0.00 0.00 3.51
4624 4760 5.518865 AGTACCTTGGTGGCATTTTGATAT 58.481 37.500 2.03 0.00 40.22 1.63
4666 4802 2.311463 TCATGGGCAAAAGTTTCCGAA 58.689 42.857 0.00 0.00 0.00 4.30
4729 4865 3.454082 AGAGGATTTCCCAGCTAGACAAG 59.546 47.826 0.00 0.00 37.41 3.16
4957 5093 2.093106 TCAGCTAGACGTTTCTCCTCC 58.907 52.381 0.00 0.00 32.75 4.30
5038 5174 6.169094 AGTATATGTATTAGCAGCTTGCCAG 58.831 40.000 0.00 0.00 46.52 4.85
5078 5214 6.777580 ACCAGTTCAAATTCTAACCTGAACAT 59.222 34.615 16.67 3.82 46.51 2.71
5108 5244 2.492881 CACAGCAATAAACCATGCAGGA 59.507 45.455 0.00 0.00 44.95 3.86
5185 5321 8.733458 TCTGATGAGTCAAATCTAACAAAATGG 58.267 33.333 0.00 0.00 33.05 3.16
5222 5358 4.920376 TCAAACTTCTTGCAGCTACAAAC 58.080 39.130 0.11 0.00 0.00 2.93
5248 5384 1.376609 GGCAACATGGAAGGCCTACG 61.377 60.000 5.16 0.00 43.09 3.51
5299 5435 9.927668 AAAATATATTGTGGTGGAAGTTCTTTG 57.072 29.630 2.25 0.00 0.00 2.77
6046 6443 2.779755 ACATATGGTGCCTGTTTCGA 57.220 45.000 7.80 0.00 0.00 3.71
6048 6445 4.457603 TGTGTAACATATGGTGCCTGTTTC 59.542 41.667 2.68 0.00 45.67 2.78
6157 6555 8.798153 GTGACAGCAAAGTATAAATTGTATTGC 58.202 33.333 0.00 0.00 41.34 3.56
6169 6567 6.183360 ACCGATATGTAGTGACAGCAAAGTAT 60.183 38.462 0.00 0.00 39.50 2.12
6265 6663 2.700773 GGTGCATTTGAGGACCGCC 61.701 63.158 0.00 0.00 40.26 6.13
6300 6698 5.878116 TGTAACCAACCATAGAGTAATGCAC 59.122 40.000 0.00 0.00 0.00 4.57
6340 6738 9.713684 AGAAATAATTGGAGTAAAATCCCATGA 57.286 29.630 0.00 0.00 38.72 3.07
6343 6741 9.540538 TGAAGAAATAATTGGAGTAAAATCCCA 57.459 29.630 0.00 0.00 38.72 4.37
6358 6756 6.948309 ACCCTAGCAACTGTTGAAGAAATAAT 59.052 34.615 23.81 0.00 0.00 1.28
6464 6862 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
6465 6863 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
6466 6864 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
6467 6865 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
6468 6866 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
6469 6867 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
6470 6868 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
6471 6869 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
6472 6870 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
6473 6871 4.730949 ATCCGAGACAAGTAATTCCGAA 57.269 40.909 0.00 0.00 0.00 4.30
6474 6872 5.278808 CCATATCCGAGACAAGTAATTCCGA 60.279 44.000 0.00 0.00 0.00 4.55
6475 6873 4.923871 CCATATCCGAGACAAGTAATTCCG 59.076 45.833 0.00 0.00 0.00 4.30
6476 6874 6.097915 TCCATATCCGAGACAAGTAATTCC 57.902 41.667 0.00 0.00 0.00 3.01
6477 6875 7.155328 ACATCCATATCCGAGACAAGTAATTC 58.845 38.462 0.00 0.00 0.00 2.17
6478 6876 7.067496 ACATCCATATCCGAGACAAGTAATT 57.933 36.000 0.00 0.00 0.00 1.40
6479 6877 6.672266 ACATCCATATCCGAGACAAGTAAT 57.328 37.500 0.00 0.00 0.00 1.89
6480 6878 7.670140 AGATACATCCATATCCGAGACAAGTAA 59.330 37.037 0.00 0.00 32.76 2.24
6481 6879 7.175797 AGATACATCCATATCCGAGACAAGTA 58.824 38.462 0.00 0.00 32.76 2.24
6482 6880 6.013379 AGATACATCCATATCCGAGACAAGT 58.987 40.000 0.00 0.00 32.76 3.16
6483 6881 6.522625 AGATACATCCATATCCGAGACAAG 57.477 41.667 0.00 0.00 32.76 3.16
6484 6882 7.402862 TCTAGATACATCCATATCCGAGACAA 58.597 38.462 0.00 0.00 32.76 3.18
6485 6883 6.958767 TCTAGATACATCCATATCCGAGACA 58.041 40.000 0.00 0.00 32.76 3.41
6486 6884 7.554835 AGTTCTAGATACATCCATATCCGAGAC 59.445 40.741 0.00 0.00 32.76 3.36
6487 6885 7.634718 AGTTCTAGATACATCCATATCCGAGA 58.365 38.462 0.00 0.00 32.76 4.04
6488 6886 7.873719 AGTTCTAGATACATCCATATCCGAG 57.126 40.000 0.00 0.00 32.76 4.63
6489 6887 9.749340 TTTAGTTCTAGATACATCCATATCCGA 57.251 33.333 0.00 0.00 32.76 4.55
6515 6913 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
6516 6914 8.819845 TGCAGAAATGGATGTATCTAGATGTAT 58.180 33.333 15.79 9.11 0.00 2.29
6517 6915 8.193953 TGCAGAAATGGATGTATCTAGATGTA 57.806 34.615 15.79 4.44 0.00 2.29
6518 6916 7.071069 TGCAGAAATGGATGTATCTAGATGT 57.929 36.000 15.79 1.25 0.00 3.06
6519 6917 7.443272 TGTTGCAGAAATGGATGTATCTAGATG 59.557 37.037 15.79 0.00 0.00 2.90
6520 6918 7.512130 TGTTGCAGAAATGGATGTATCTAGAT 58.488 34.615 10.73 10.73 0.00 1.98
6521 6919 6.888105 TGTTGCAGAAATGGATGTATCTAGA 58.112 36.000 0.00 0.00 0.00 2.43
6522 6920 7.281774 ACTTGTTGCAGAAATGGATGTATCTAG 59.718 37.037 0.00 0.00 0.00 2.43
6523 6921 7.112122 ACTTGTTGCAGAAATGGATGTATCTA 58.888 34.615 0.00 0.00 0.00 1.98
6524 6922 5.948162 ACTTGTTGCAGAAATGGATGTATCT 59.052 36.000 0.00 0.00 0.00 1.98
6525 6923 6.199937 ACTTGTTGCAGAAATGGATGTATC 57.800 37.500 0.00 0.00 0.00 2.24
6526 6924 7.701539 TTACTTGTTGCAGAAATGGATGTAT 57.298 32.000 0.00 0.00 0.00 2.29
6527 6925 7.701539 ATTACTTGTTGCAGAAATGGATGTA 57.298 32.000 0.00 0.00 0.00 2.29
6528 6926 6.594788 ATTACTTGTTGCAGAAATGGATGT 57.405 33.333 0.00 0.00 0.00 3.06
6529 6927 6.532657 GGAATTACTTGTTGCAGAAATGGATG 59.467 38.462 0.00 0.00 0.00 3.51
6530 6928 6.625740 CGGAATTACTTGTTGCAGAAATGGAT 60.626 38.462 0.00 0.00 0.00 3.41
6531 6929 5.335583 CGGAATTACTTGTTGCAGAAATGGA 60.336 40.000 0.00 0.00 0.00 3.41
6532 6930 4.858692 CGGAATTACTTGTTGCAGAAATGG 59.141 41.667 0.00 0.00 0.00 3.16
6533 6931 5.698832 TCGGAATTACTTGTTGCAGAAATG 58.301 37.500 0.00 0.00 0.00 2.32
6534 6932 5.957842 TCGGAATTACTTGTTGCAGAAAT 57.042 34.783 0.00 0.00 0.00 2.17
6535 6933 5.516090 GTTCGGAATTACTTGTTGCAGAAA 58.484 37.500 0.00 0.00 0.00 2.52
6536 6934 4.319190 CGTTCGGAATTACTTGTTGCAGAA 60.319 41.667 0.00 0.00 0.00 3.02
6537 6935 3.185594 CGTTCGGAATTACTTGTTGCAGA 59.814 43.478 0.00 0.00 0.00 4.26
6538 6936 3.479006 CGTTCGGAATTACTTGTTGCAG 58.521 45.455 0.00 0.00 0.00 4.41
6539 6937 2.224549 CCGTTCGGAATTACTTGTTGCA 59.775 45.455 5.19 0.00 0.00 4.08
6540 6938 2.481185 TCCGTTCGGAATTACTTGTTGC 59.519 45.455 11.66 0.00 0.00 4.17
6541 6939 3.124636 CCTCCGTTCGGAATTACTTGTTG 59.875 47.826 14.79 0.00 33.41 3.33
6542 6940 3.332034 CCTCCGTTCGGAATTACTTGTT 58.668 45.455 14.79 0.00 33.41 2.83
6543 6941 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
6544 6942 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
6545 6943 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
6546 6944 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
6547 6945 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
6548 6946 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
6549 6947 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
6550 6948 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
6551 6949 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
6552 6950 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
6553 6951 0.172803 CAACTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30
6554 6952 1.171308 TCAACTACTCCCTCCGTTCG 58.829 55.000 0.00 0.00 0.00 3.95
6555 6953 2.496470 ACATCAACTACTCCCTCCGTTC 59.504 50.000 0.00 0.00 0.00 3.95
6556 6954 2.537143 ACATCAACTACTCCCTCCGTT 58.463 47.619 0.00 0.00 0.00 4.44
6557 6955 2.233305 ACATCAACTACTCCCTCCGT 57.767 50.000 0.00 0.00 0.00 4.69
6558 6956 3.288964 ACTACATCAACTACTCCCTCCG 58.711 50.000 0.00 0.00 0.00 4.63
6559 6957 3.315749 CGACTACATCAACTACTCCCTCC 59.684 52.174 0.00 0.00 0.00 4.30
6560 6958 3.315749 CCGACTACATCAACTACTCCCTC 59.684 52.174 0.00 0.00 0.00 4.30
6561 6959 3.288964 CCGACTACATCAACTACTCCCT 58.711 50.000 0.00 0.00 0.00 4.20
6562 6960 3.022406 ACCGACTACATCAACTACTCCC 58.978 50.000 0.00 0.00 0.00 4.30
6563 6961 3.693085 TGACCGACTACATCAACTACTCC 59.307 47.826 0.00 0.00 0.00 3.85
6564 6962 4.959596 TGACCGACTACATCAACTACTC 57.040 45.455 0.00 0.00 0.00 2.59
6565 6963 4.765856 ACTTGACCGACTACATCAACTACT 59.234 41.667 0.00 0.00 0.00 2.57
6566 6964 4.857588 CACTTGACCGACTACATCAACTAC 59.142 45.833 0.00 0.00 0.00 2.73
6567 6965 4.763279 TCACTTGACCGACTACATCAACTA 59.237 41.667 0.00 0.00 0.00 2.24
6568 6966 3.572682 TCACTTGACCGACTACATCAACT 59.427 43.478 0.00 0.00 0.00 3.16
6569 6967 3.673809 GTCACTTGACCGACTACATCAAC 59.326 47.826 0.00 0.00 39.07 3.18
6570 6968 3.572682 AGTCACTTGACCGACTACATCAA 59.427 43.478 5.73 0.00 45.85 2.57
6736 7389 1.635817 GGTGGCCCAGCTGAGGATTA 61.636 60.000 17.39 2.23 0.00 1.75
6931 7584 0.847373 TCCAGGTTTTACCAGTGCCA 59.153 50.000 0.00 0.00 41.95 4.92
6987 7642 3.637432 TGCACTTTTATGGCTTTCAACG 58.363 40.909 0.00 0.00 0.00 4.10
7027 7683 6.587608 CCTTGCCTCATCAAGTATTTCAAAAC 59.412 38.462 3.29 0.00 41.29 2.43
7064 7720 7.484140 CAACTTTCCTCTTATATGAAAAGGGC 58.516 38.462 13.33 0.00 0.00 5.19
7118 7776 9.556030 GTGCTTTTACTTTATGTATTCCAGTTC 57.444 33.333 0.00 0.00 0.00 3.01
7167 7825 6.649557 CGAATATGTCCATCTAAACCTTACCC 59.350 42.308 0.00 0.00 0.00 3.69
7169 7827 7.384387 GTCCGAATATGTCCATCTAAACCTTAC 59.616 40.741 0.00 0.00 0.00 2.34
7183 7841 0.512952 GCATGCCGTCCGAATATGTC 59.487 55.000 6.36 0.00 0.00 3.06
7184 7842 0.179059 TGCATGCCGTCCGAATATGT 60.179 50.000 16.68 0.00 0.00 2.29
7192 7850 1.308047 TGATGTTATGCATGCCGTCC 58.692 50.000 16.68 1.19 38.06 4.79
7226 7884 1.690219 CGGCTCCCTTGTATCTGGCT 61.690 60.000 0.00 0.00 0.00 4.75
7241 7907 0.898326 GGTGGTTTTGGGATTCGGCT 60.898 55.000 0.00 0.00 0.00 5.52
7343 8053 2.094182 ACGATAAGCCTCTTTCTTCGCA 60.094 45.455 0.00 0.00 0.00 5.10
7412 8123 4.705507 AGATGCTGCAGATGAACAAAGAAT 59.294 37.500 20.43 0.00 0.00 2.40
7413 8124 4.077108 AGATGCTGCAGATGAACAAAGAA 58.923 39.130 20.43 0.00 0.00 2.52
7414 8125 3.439129 CAGATGCTGCAGATGAACAAAGA 59.561 43.478 20.43 0.00 0.00 2.52
7415 8126 3.439129 TCAGATGCTGCAGATGAACAAAG 59.561 43.478 20.43 0.24 0.00 2.77
7416 8127 3.414269 TCAGATGCTGCAGATGAACAAA 58.586 40.909 20.43 0.00 0.00 2.83
7417 8128 3.007635 CTCAGATGCTGCAGATGAACAA 58.992 45.455 20.43 0.00 0.00 2.83
7418 8129 2.629051 CTCAGATGCTGCAGATGAACA 58.371 47.619 20.43 5.55 0.00 3.18
7419 8130 1.941294 CCTCAGATGCTGCAGATGAAC 59.059 52.381 20.43 0.00 0.00 3.18
7427 8138 1.654954 CCTGCAACCTCAGATGCTGC 61.655 60.000 4.34 0.00 42.97 5.25
7509 8271 0.243636 AAAAATCAAGCGGCCCGAAG 59.756 50.000 7.68 0.00 0.00 3.79
7510 8272 1.470890 CTAAAAATCAAGCGGCCCGAA 59.529 47.619 7.68 0.00 0.00 4.30
7511 8273 1.091537 CTAAAAATCAAGCGGCCCGA 58.908 50.000 7.68 0.00 0.00 5.14
7512 8274 0.525455 GCTAAAAATCAAGCGGCCCG 60.525 55.000 0.00 0.00 0.00 6.13
7513 8275 3.345737 GCTAAAAATCAAGCGGCCC 57.654 52.632 0.00 0.00 0.00 5.80
7518 8280 2.095263 TGCTGTCCGCTAAAAATCAAGC 60.095 45.455 0.00 0.00 40.11 4.01
7519 8281 3.492313 GTGCTGTCCGCTAAAAATCAAG 58.508 45.455 0.00 0.00 40.11 3.02
7520 8282 2.095969 CGTGCTGTCCGCTAAAAATCAA 60.096 45.455 0.00 0.00 40.11 2.57
7521 8283 1.463056 CGTGCTGTCCGCTAAAAATCA 59.537 47.619 0.00 0.00 40.11 2.57
7522 8284 1.202031 CCGTGCTGTCCGCTAAAAATC 60.202 52.381 0.00 0.00 40.11 2.17
7523 8285 0.802494 CCGTGCTGTCCGCTAAAAAT 59.198 50.000 0.00 0.00 40.11 1.82
7524 8286 1.847890 GCCGTGCTGTCCGCTAAAAA 61.848 55.000 0.00 0.00 40.11 1.94
7525 8287 2.322081 GCCGTGCTGTCCGCTAAAA 61.322 57.895 0.00 0.00 40.11 1.52
7526 8288 2.740826 GCCGTGCTGTCCGCTAAA 60.741 61.111 0.00 0.00 40.11 1.85
7527 8289 3.932580 CTGCCGTGCTGTCCGCTAA 62.933 63.158 0.00 0.00 40.11 3.09
7528 8290 4.435436 CTGCCGTGCTGTCCGCTA 62.435 66.667 0.00 0.00 40.11 4.26
7541 8303 4.030452 GTTGCTGACGGTGCTGCC 62.030 66.667 0.00 0.00 32.49 4.85
7542 8304 4.030452 GGTTGCTGACGGTGCTGC 62.030 66.667 0.00 0.00 0.00 5.25
7543 8305 1.518056 ATTGGTTGCTGACGGTGCTG 61.518 55.000 0.00 0.00 0.00 4.41
7544 8306 1.228245 ATTGGTTGCTGACGGTGCT 60.228 52.632 0.00 0.00 0.00 4.40
7545 8307 1.210155 GATTGGTTGCTGACGGTGC 59.790 57.895 0.00 0.00 0.00 5.01
7546 8308 1.227999 ACGATTGGTTGCTGACGGTG 61.228 55.000 0.00 0.00 0.00 4.94
7547 8309 0.534203 AACGATTGGTTGCTGACGGT 60.534 50.000 0.00 0.00 37.50 4.83
7548 8310 0.165944 GAACGATTGGTTGCTGACGG 59.834 55.000 0.00 0.00 39.50 4.79
7549 8311 1.126846 GAGAACGATTGGTTGCTGACG 59.873 52.381 0.00 0.00 39.50 4.35
7550 8312 2.143122 TGAGAACGATTGGTTGCTGAC 58.857 47.619 0.00 0.00 39.50 3.51
7551 8313 2.542020 TGAGAACGATTGGTTGCTGA 57.458 45.000 0.00 0.00 39.50 4.26
7607 8369 7.633018 AATAGACCCATTCCACACAGTATAT 57.367 36.000 0.00 0.00 0.00 0.86
7624 8386 5.074584 AGAAGAGTGTTCGGAAATAGACC 57.925 43.478 0.00 0.00 0.00 3.85
7647 8409 1.606601 ACGGCACACTAGAGCTGGA 60.607 57.895 15.90 0.00 41.37 3.86
7661 8423 4.115199 ATCTTCAGGGGGCACGGC 62.115 66.667 0.00 0.00 0.00 5.68
7679 8441 3.190118 GCAAACAGAGGAATTGTCTGGAG 59.810 47.826 15.61 8.19 44.96 3.86
7683 8446 3.416156 GAGGCAAACAGAGGAATTGTCT 58.584 45.455 0.00 0.00 41.38 3.41
7684 8447 2.160417 CGAGGCAAACAGAGGAATTGTC 59.840 50.000 0.00 0.00 0.00 3.18
7687 8450 1.168714 GCGAGGCAAACAGAGGAATT 58.831 50.000 0.00 0.00 0.00 2.17
7708 8471 1.079503 CGTTAGCTTGTTGAGGAGCC 58.920 55.000 0.00 0.00 39.71 4.70
7747 8510 4.642437 TGATTGAGAATCTCGTGAGCTACT 59.358 41.667 5.73 0.00 38.72 2.57
7756 8526 7.704047 TCACTTGATACTTGATTGAGAATCTCG 59.296 37.037 5.73 0.00 38.72 4.04
7767 8537 7.179338 AGTTACAGTCCTCACTTGATACTTGAT 59.821 37.037 0.00 0.00 0.00 2.57
7768 8538 6.493802 AGTTACAGTCCTCACTTGATACTTGA 59.506 38.462 0.00 0.00 0.00 3.02
7769 8539 6.587990 CAGTTACAGTCCTCACTTGATACTTG 59.412 42.308 0.00 0.00 0.00 3.16
7770 8540 6.267928 ACAGTTACAGTCCTCACTTGATACTT 59.732 38.462 0.00 0.00 0.00 2.24
7771 8541 5.775701 ACAGTTACAGTCCTCACTTGATACT 59.224 40.000 0.00 0.00 0.00 2.12
7772 8542 6.026947 ACAGTTACAGTCCTCACTTGATAC 57.973 41.667 0.00 0.00 0.00 2.24
7773 8543 6.665992 AACAGTTACAGTCCTCACTTGATA 57.334 37.500 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.