Multiple sequence alignment - TraesCS5A01G412000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G412000 chr5A 100.000 4621 0 0 1 4621 600445551 600440931 0.000000e+00 8534.0
1 TraesCS5A01G412000 chr5A 89.384 292 20 5 4040 4329 590061452 590061170 1.580000e-94 357.0
2 TraesCS5A01G412000 chr5D 93.061 3329 133 29 733 4020 481431801 481428530 0.000000e+00 4778.0
3 TraesCS5A01G412000 chr5D 93.312 314 10 4 4018 4329 347680056 347680360 1.960000e-123 453.0
4 TraesCS5A01G412000 chr5D 93.729 303 11 1 4327 4621 481428532 481428230 9.120000e-122 448.0
5 TraesCS5A01G412000 chr5D 100.000 37 0 0 703 739 481431848 481431812 8.300000e-08 69.4
6 TraesCS5A01G412000 chr5B 90.241 3238 224 34 733 3939 590004682 590001506 0.000000e+00 4145.0
7 TraesCS5A01G412000 chr5B 87.073 410 30 10 248 650 590005147 590004754 4.240000e-120 442.0
8 TraesCS5A01G412000 chr5B 89.960 249 22 3 1 247 590005544 590005297 7.460000e-83 318.0
9 TraesCS5A01G412000 chr5B 84.583 240 26 5 4384 4621 590001323 590001093 1.290000e-55 228.0
10 TraesCS5A01G412000 chr5B 87.629 97 11 1 3925 4020 590001489 590001393 1.360000e-20 111.0
11 TraesCS5A01G412000 chr6A 82.636 1100 130 26 893 1973 368498488 368497431 0.000000e+00 917.0
12 TraesCS5A01G412000 chr6A 85.882 170 20 2 1802 1970 594620968 594620802 1.320000e-40 178.0
13 TraesCS5A01G412000 chr7D 90.468 577 44 6 1403 1970 17139864 17139290 0.000000e+00 750.0
14 TraesCS5A01G412000 chr7D 92.744 317 12 4 4018 4332 532067966 532067659 9.120000e-122 448.0
15 TraesCS5A01G412000 chr7D 91.720 314 16 5 4016 4328 637455240 637454936 1.190000e-115 427.0
16 TraesCS5A01G412000 chr7D 88.535 314 24 9 4018 4328 409099464 409099768 2.030000e-98 370.0
17 TraesCS5A01G412000 chr7D 86.802 197 11 4 892 1087 17140139 17139957 6.060000e-49 206.0
18 TraesCS5A01G412000 chr7D 98.780 82 1 0 1600 1681 494073833 494073914 3.730000e-31 147.0
19 TraesCS5A01G412000 chr7D 94.595 37 1 1 389 425 563608927 563608962 6.460000e-04 56.5
20 TraesCS5A01G412000 chr1D 93.631 314 8 4 4018 4328 411905197 411904893 4.210000e-125 459.0
21 TraesCS5A01G412000 chr1D 95.238 42 0 2 386 425 379476220 379476261 1.070000e-06 65.8
22 TraesCS5A01G412000 chr3B 90.881 329 11 9 4018 4337 665245880 665245562 1.540000e-114 424.0
23 TraesCS5A01G412000 chr3B 88.988 336 28 3 1424 1750 52518652 52518317 1.550000e-109 407.0
24 TraesCS5A01G412000 chr3B 97.297 37 1 0 389 425 728502909 728502945 3.860000e-06 63.9
25 TraesCS5A01G412000 chr6B 83.333 480 52 11 884 1359 432005387 432005842 7.150000e-113 418.0
26 TraesCS5A01G412000 chr6B 91.949 236 17 2 1412 1646 432005857 432006091 3.450000e-86 329.0
27 TraesCS5A01G412000 chr6B 85.965 171 21 3 1798 1967 636124275 636124443 3.670000e-41 180.0
28 TraesCS5A01G412000 chr1A 89.873 316 18 7 4018 4328 99744246 99744552 1.210000e-105 394.0
29 TraesCS5A01G412000 chr1A 89.590 317 21 7 4018 4329 575670347 575670656 4.330000e-105 392.0
30 TraesCS5A01G412000 chr2A 89.103 312 26 6 4018 4328 434863786 434863482 9.380000e-102 381.0
31 TraesCS5A01G412000 chr2A 88.889 315 26 6 4018 4328 771956392 771956701 3.370000e-101 379.0
32 TraesCS5A01G412000 chr3A 88.272 162 16 3 1798 1958 570144426 570144585 1.700000e-44 191.0
33 TraesCS5A01G412000 chr3A 100.000 30 0 0 396 425 724899789 724899760 6.460000e-04 56.5
34 TraesCS5A01G412000 chr6D 88.667 150 17 0 1375 1524 223690225 223690374 2.840000e-42 183.0
35 TraesCS5A01G412000 chr6D 94.444 36 1 1 1322 1356 223690185 223690220 2.000000e-03 54.7
36 TraesCS5A01G412000 chr4A 84.795 171 23 3 1798 1967 551543204 551543372 7.950000e-38 169.0
37 TraesCS5A01G412000 chr4A 100.000 33 0 0 393 425 459666397 459666365 1.390000e-05 62.1
38 TraesCS5A01G412000 chr4A 94.737 38 1 1 392 429 242896659 242896623 1.800000e-04 58.4
39 TraesCS5A01G412000 chrUn 98.780 82 1 0 1600 1681 304779095 304779014 3.730000e-31 147.0
40 TraesCS5A01G412000 chr3D 100.000 34 0 0 392 425 382751671 382751704 3.860000e-06 63.9
41 TraesCS5A01G412000 chr2B 94.595 37 2 0 389 425 641192349 641192385 1.800000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G412000 chr5A 600440931 600445551 4620 True 8534.000000 8534 100.000000 1 4621 1 chr5A.!!$R2 4620
1 TraesCS5A01G412000 chr5D 481428230 481431848 3618 True 1765.133333 4778 95.596667 703 4621 3 chr5D.!!$R1 3918
2 TraesCS5A01G412000 chr5B 590001093 590005544 4451 True 1048.800000 4145 87.897200 1 4621 5 chr5B.!!$R1 4620
3 TraesCS5A01G412000 chr6A 368497431 368498488 1057 True 917.000000 917 82.636000 893 1973 1 chr6A.!!$R1 1080
4 TraesCS5A01G412000 chr7D 17139290 17140139 849 True 478.000000 750 88.635000 892 1970 2 chr7D.!!$R3 1078
5 TraesCS5A01G412000 chr6B 432005387 432006091 704 False 373.500000 418 87.641000 884 1646 2 chr6B.!!$F2 762


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
310 462 0.172803 GGGCGTATGTCGTCTTCTGT 59.827 55.0 0.0 0.0 44.25 3.41 F
1373 1581 0.107945 AGCCGTTCAATCCTCTGCTC 60.108 55.0 0.0 0.0 0.00 4.26 F
1713 1939 0.435008 GTTAGCGCTATCGGCATTCG 59.565 55.0 19.6 0.0 41.91 3.34 F
1774 2000 0.886563 AGCTGGCTGTTGCTCATTTC 59.113 50.0 0.0 0.0 39.59 2.17 F
3050 3288 0.245539 TCCAAGTTCGAGTAAGGCGG 59.754 55.0 0.0 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1525 1733 0.179062 CCGGGCCAGATTCAGAGAAG 60.179 60.000 4.39 0.00 0.00 2.85 R
2501 2739 0.108615 AACTTGATCCCGCAGTCGAG 60.109 55.000 0.00 0.00 38.10 4.04 R
2855 3093 1.694696 ACCCTCAGAGTTCTGGAACAC 59.305 52.381 14.67 9.06 43.91 3.32 R
3425 3664 3.233507 ACATGTTTGGCCAGATGAAAGT 58.766 40.909 21.93 8.48 0.00 2.66 R
4133 4415 0.034089 GCACTTAGCTCATTGGGGGT 60.034 55.000 0.00 0.00 41.15 4.95 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.974383 ACTTCGACTTCCCGTTGGAT 59.026 50.000 0.00 0.00 41.40 3.41
23 24 2.106683 CGACTTCCCGTTGGATGCC 61.107 63.158 0.00 0.00 41.40 4.40
25 26 0.539986 GACTTCCCGTTGGATGCCTA 59.460 55.000 0.00 0.00 41.40 3.93
44 45 2.586792 GGCAAGCTCTCGGGTGAT 59.413 61.111 0.00 0.00 0.00 3.06
50 51 0.324738 AGCTCTCGGGTGATCCAGAA 60.325 55.000 0.00 0.00 37.47 3.02
51 52 0.755686 GCTCTCGGGTGATCCAGAAT 59.244 55.000 0.00 0.00 37.47 2.40
52 53 1.539929 GCTCTCGGGTGATCCAGAATG 60.540 57.143 0.00 0.00 37.47 2.67
53 54 0.465705 TCTCGGGTGATCCAGAATGC 59.534 55.000 0.00 0.00 37.47 3.56
54 55 0.467384 CTCGGGTGATCCAGAATGCT 59.533 55.000 0.00 0.00 37.47 3.79
55 56 0.465705 TCGGGTGATCCAGAATGCTC 59.534 55.000 0.00 0.00 35.16 4.26
56 57 0.877649 CGGGTGATCCAGAATGCTCG 60.878 60.000 0.00 0.00 34.36 5.03
95 97 1.133199 ACTTGGCTTTCATTGACCCCA 60.133 47.619 0.00 0.00 0.00 4.96
98 100 1.607801 GGCTTTCATTGACCCCAGGC 61.608 60.000 0.00 0.00 0.00 4.85
113 115 2.202783 GGCCCAACGCATGCAATC 60.203 61.111 19.57 0.00 40.31 2.67
119 121 1.066002 CCAACGCATGCAATCCTTAGG 59.934 52.381 19.57 3.64 0.00 2.69
121 123 0.394216 ACGCATGCAATCCTTAGGCA 60.394 50.000 19.57 0.00 42.43 4.75
136 138 6.231211 TCCTTAGGCAGAGAACTTTGTAAAG 58.769 40.000 0.00 2.94 41.73 1.85
155 158 9.923143 TTGTAAAGAGAAACTATTCTTCGATGA 57.077 29.630 0.00 0.00 45.91 2.92
161 164 3.460857 ACTATTCTTCGATGACCCAGC 57.539 47.619 0.00 0.00 0.00 4.85
270 422 2.603110 CACCGTCAACGACCTATGATTG 59.397 50.000 3.71 0.00 43.02 2.67
278 430 4.073293 ACGACCTATGATTGTGAATCCC 57.927 45.455 0.00 0.00 37.09 3.85
285 437 2.817665 TGATTGTGAATCCCATTGCCA 58.182 42.857 0.00 0.00 37.09 4.92
303 455 2.363975 ATGTGGGGGCGTATGTCGT 61.364 57.895 0.00 0.00 42.13 4.34
307 459 1.227176 GGGGGCGTATGTCGTCTTC 60.227 63.158 0.00 0.00 44.25 2.87
310 462 0.172803 GGGCGTATGTCGTCTTCTGT 59.827 55.000 0.00 0.00 44.25 3.41
314 466 2.786854 CGTATGTCGTCTTCTGTGGAG 58.213 52.381 0.00 0.00 34.52 3.86
315 467 2.531206 GTATGTCGTCTTCTGTGGAGC 58.469 52.381 0.00 0.00 0.00 4.70
343 495 8.859090 ACTCTCTCTTGAAATGACCATCTATAG 58.141 37.037 0.00 0.00 0.00 1.31
365 517 2.491621 GGCATTGCCGAGAAAGCC 59.508 61.111 12.82 0.00 39.62 4.35
367 519 1.586028 GCATTGCCGAGAAAGCCAA 59.414 52.632 0.00 0.00 0.00 4.52
377 529 4.929211 GCCGAGAAAGCCAACAAAATTTAT 59.071 37.500 0.00 0.00 0.00 1.40
425 577 9.502035 TCTTATATTTCTTTCCAGAGGGAGTAA 57.498 33.333 0.00 0.00 46.01 2.24
438 593 0.250338 GGAGTAATCACCATCCCCGC 60.250 60.000 0.00 0.00 0.00 6.13
446 601 4.250305 CCATCCCCGCCTAACCCG 62.250 72.222 0.00 0.00 0.00 5.28
447 602 3.476419 CATCCCCGCCTAACCCGT 61.476 66.667 0.00 0.00 0.00 5.28
448 603 2.135581 CATCCCCGCCTAACCCGTA 61.136 63.158 0.00 0.00 0.00 4.02
449 604 1.835712 ATCCCCGCCTAACCCGTAG 60.836 63.158 0.00 0.00 0.00 3.51
451 606 2.059786 CCCCGCCTAACCCGTAGAA 61.060 63.158 0.00 0.00 30.50 2.10
452 607 1.440476 CCCGCCTAACCCGTAGAAG 59.560 63.158 0.00 0.00 30.50 2.85
453 608 1.227176 CCGCCTAACCCGTAGAAGC 60.227 63.158 0.00 0.00 30.50 3.86
454 609 1.588139 CGCCTAACCCGTAGAAGCG 60.588 63.158 0.00 0.00 35.24 4.68
455 610 1.881709 GCCTAACCCGTAGAAGCGC 60.882 63.158 0.00 0.00 30.50 5.92
456 611 1.588139 CCTAACCCGTAGAAGCGCG 60.588 63.158 0.00 0.00 30.50 6.86
457 612 1.588139 CTAACCCGTAGAAGCGCGG 60.588 63.158 8.83 0.00 46.80 6.46
480 635 2.033424 CAGGCGATGTGATAGAACGAGA 59.967 50.000 0.00 0.00 0.00 4.04
483 638 3.426859 GGCGATGTGATAGAACGAGAATG 59.573 47.826 0.00 0.00 0.00 2.67
485 640 4.920340 GCGATGTGATAGAACGAGAATGAT 59.080 41.667 0.00 0.00 0.00 2.45
487 642 6.074088 GCGATGTGATAGAACGAGAATGATTT 60.074 38.462 0.00 0.00 0.00 2.17
489 644 8.331022 CGATGTGATAGAACGAGAATGATTTTT 58.669 33.333 0.00 0.00 0.00 1.94
523 678 2.740447 AGCGAGGAATGTCGTTTTTACC 59.260 45.455 0.00 0.00 42.17 2.85
530 685 7.428183 CGAGGAATGTCGTTTTTACCAAATATG 59.572 37.037 0.00 0.00 35.14 1.78
531 686 8.117813 AGGAATGTCGTTTTTACCAAATATGT 57.882 30.769 0.00 0.00 0.00 2.29
558 713 2.500392 TCAACCAAAATCCTACCCCG 57.500 50.000 0.00 0.00 0.00 5.73
559 714 1.706305 TCAACCAAAATCCTACCCCGT 59.294 47.619 0.00 0.00 0.00 5.28
560 715 2.911636 TCAACCAAAATCCTACCCCGTA 59.088 45.455 0.00 0.00 0.00 4.02
579 734 8.054572 ACCCCGTAATAAATGTAATTAACACCT 58.945 33.333 0.00 0.00 42.09 4.00
580 735 8.562052 CCCCGTAATAAATGTAATTAACACCTC 58.438 37.037 0.00 0.00 42.09 3.85
581 736 8.277713 CCCGTAATAAATGTAATTAACACCTCG 58.722 37.037 0.00 0.00 42.09 4.63
615 771 1.570979 AGAATCACCCCCAAATCTCCC 59.429 52.381 0.00 0.00 0.00 4.30
619 775 1.935931 ACCCCCAAATCTCCCCCTG 60.936 63.158 0.00 0.00 0.00 4.45
644 802 2.846193 CTCCGTTCAAAACAGGAAGGA 58.154 47.619 0.00 0.00 35.04 3.36
650 808 0.875059 CAAAACAGGAAGGAGACGCC 59.125 55.000 0.00 0.00 0.00 5.68
651 809 0.250770 AAAACAGGAAGGAGACGCCC 60.251 55.000 0.00 0.00 37.37 6.13
652 810 1.128188 AAACAGGAAGGAGACGCCCT 61.128 55.000 0.00 0.00 38.42 5.19
653 811 1.545706 AACAGGAAGGAGACGCCCTC 61.546 60.000 0.00 0.00 41.22 4.30
654 812 1.984570 CAGGAAGGAGACGCCCTCA 60.985 63.158 7.58 0.00 43.76 3.86
655 813 1.229209 AGGAAGGAGACGCCCTCAA 60.229 57.895 7.58 0.00 43.76 3.02
656 814 0.836400 AGGAAGGAGACGCCCTCAAA 60.836 55.000 7.58 0.00 43.76 2.69
660 818 0.984230 AGGAGACGCCCTCAAAATCA 59.016 50.000 7.58 0.00 43.76 2.57
661 819 1.351017 AGGAGACGCCCTCAAAATCAA 59.649 47.619 7.58 0.00 43.76 2.57
662 820 2.159382 GGAGACGCCCTCAAAATCAAA 58.841 47.619 7.58 0.00 43.76 2.69
665 823 4.229876 GAGACGCCCTCAAAATCAAAAAG 58.770 43.478 1.05 0.00 41.58 2.27
666 824 2.731451 GACGCCCTCAAAATCAAAAAGC 59.269 45.455 0.00 0.00 0.00 3.51
667 825 2.365293 ACGCCCTCAAAATCAAAAAGCT 59.635 40.909 0.00 0.00 0.00 3.74
668 826 2.989166 CGCCCTCAAAATCAAAAAGCTC 59.011 45.455 0.00 0.00 0.00 4.09
669 827 3.552684 CGCCCTCAAAATCAAAAAGCTCA 60.553 43.478 0.00 0.00 0.00 4.26
670 828 4.379652 GCCCTCAAAATCAAAAAGCTCAA 58.620 39.130 0.00 0.00 0.00 3.02
671 829 4.815846 GCCCTCAAAATCAAAAAGCTCAAA 59.184 37.500 0.00 0.00 0.00 2.69
672 830 5.296531 GCCCTCAAAATCAAAAAGCTCAAAA 59.703 36.000 0.00 0.00 0.00 2.44
673 831 6.512253 GCCCTCAAAATCAAAAAGCTCAAAAG 60.512 38.462 0.00 0.00 0.00 2.27
674 832 6.017687 CCCTCAAAATCAAAAAGCTCAAAAGG 60.018 38.462 0.00 0.00 0.00 3.11
675 833 6.017687 CCTCAAAATCAAAAAGCTCAAAAGGG 60.018 38.462 0.00 0.00 0.00 3.95
676 834 5.821995 TCAAAATCAAAAAGCTCAAAAGGGG 59.178 36.000 0.00 0.00 0.00 4.79
677 835 2.908688 TCAAAAAGCTCAAAAGGGGC 57.091 45.000 0.00 0.00 0.00 5.80
678 836 1.068434 TCAAAAAGCTCAAAAGGGGCG 59.932 47.619 0.00 0.00 0.00 6.13
679 837 0.249868 AAAAAGCTCAAAAGGGGCGC 60.250 50.000 0.00 0.00 0.00 6.53
680 838 1.115326 AAAAGCTCAAAAGGGGCGCT 61.115 50.000 7.64 0.00 0.00 5.92
681 839 1.527433 AAAGCTCAAAAGGGGCGCTC 61.527 55.000 7.64 1.18 0.00 5.03
682 840 3.443925 GCTCAAAAGGGGCGCTCC 61.444 66.667 22.03 22.03 0.00 4.70
683 841 3.127533 CTCAAAAGGGGCGCTCCG 61.128 66.667 23.34 6.63 36.01 4.63
684 842 3.605749 CTCAAAAGGGGCGCTCCGA 62.606 63.158 23.34 11.43 36.01 4.55
685 843 2.438434 CAAAAGGGGCGCTCCGAT 60.438 61.111 23.34 11.92 36.01 4.18
686 844 2.438434 AAAAGGGGCGCTCCGATG 60.438 61.111 23.34 0.00 36.01 3.84
760 942 2.202676 CTCGCTGACTCCGCCTTC 60.203 66.667 0.00 0.00 0.00 3.46
986 1177 4.361971 ACGCGGTGAGGAGGAGGA 62.362 66.667 12.47 0.00 0.00 3.71
987 1178 2.835431 CGCGGTGAGGAGGAGGAT 60.835 66.667 0.00 0.00 0.00 3.24
1094 1285 2.678934 CTCCTCCGTCGTCCCCAA 60.679 66.667 0.00 0.00 0.00 4.12
1096 1287 3.307906 CCTCCGTCGTCCCCAACA 61.308 66.667 0.00 0.00 0.00 3.33
1104 1295 1.152839 CGTCCCCAACACCAAGGTT 60.153 57.895 0.00 0.00 0.00 3.50
1106 1300 0.750249 GTCCCCAACACCAAGGTTTG 59.250 55.000 0.00 0.00 0.00 2.93
1181 1382 2.429494 GGATCAGCTAGCTGGGGC 59.571 66.667 37.60 26.97 43.75 5.80
1373 1581 0.107945 AGCCGTTCAATCCTCTGCTC 60.108 55.000 0.00 0.00 0.00 4.26
1417 1625 5.974751 GCTTCTTTGGTGTTCGATTTTTGTA 59.025 36.000 0.00 0.00 0.00 2.41
1418 1626 6.640907 GCTTCTTTGGTGTTCGATTTTTGTAT 59.359 34.615 0.00 0.00 0.00 2.29
1419 1627 7.169140 GCTTCTTTGGTGTTCGATTTTTGTATT 59.831 33.333 0.00 0.00 0.00 1.89
1422 1630 7.976734 TCTTTGGTGTTCGATTTTTGTATTGTT 59.023 29.630 0.00 0.00 0.00 2.83
1501 1709 3.917760 GGGTGGATCCGGAGCTCG 61.918 72.222 20.86 3.03 37.00 5.03
1525 1733 1.080434 GAGGAGGTATGGCGATCGC 60.080 63.158 31.52 31.52 41.06 4.58
1566 1775 4.256920 GTTCAGATCTGCTTCCTTGCTAA 58.743 43.478 18.36 0.00 0.00 3.09
1613 1822 4.276926 ACTTGAGACCTGAATTTTGTCTGC 59.723 41.667 9.38 4.10 39.36 4.26
1686 1904 8.133627 GGGATTATGTCTTTATATGCATGATGC 58.866 37.037 11.12 11.12 45.29 3.91
1713 1939 0.435008 GTTAGCGCTATCGGCATTCG 59.565 55.000 19.60 0.00 41.91 3.34
1774 2000 0.886563 AGCTGGCTGTTGCTCATTTC 59.113 50.000 0.00 0.00 39.59 2.17
1809 2035 7.818446 CACTGATATAGGAGTTCAATGGATCAG 59.182 40.741 0.00 0.00 42.14 2.90
1885 2111 7.840342 TTCTTCTCTTGAATCTACATTGCTC 57.160 36.000 0.00 0.00 0.00 4.26
1992 2219 6.038603 GCAGTGGATTTATAGCAGTGAATTCA 59.961 38.462 3.38 3.38 0.00 2.57
2060 2295 6.553953 TTCACTGATATTAACAGGCCACTA 57.446 37.500 5.01 0.00 39.38 2.74
2112 2347 7.819415 GGAAACTCCAAATGAAATCCTTAAAGG 59.181 37.037 0.00 0.00 36.28 3.11
2117 2352 5.395657 CCAAATGAAATCCTTAAAGGGCCTC 60.396 44.000 6.46 0.00 35.59 4.70
2232 2467 1.888512 TGAATGCCAAACTCCTTCAGC 59.111 47.619 0.00 0.00 0.00 4.26
2253 2488 3.648009 CGTCTCATCAAAGCTCCTATCC 58.352 50.000 0.00 0.00 0.00 2.59
2254 2489 3.648009 GTCTCATCAAAGCTCCTATCCG 58.352 50.000 0.00 0.00 0.00 4.18
2501 2739 2.098117 GGTGTGAATAATGAGCCTGTGC 59.902 50.000 0.00 0.00 37.95 4.57
2556 2794 2.099141 TGCTCTGTCACCAGTAATGC 57.901 50.000 0.00 0.00 39.82 3.56
2623 2861 4.322198 CCTTTGAAAGTGAATGGTGGGATG 60.322 45.833 4.02 0.00 0.00 3.51
2665 2903 4.527038 CAGGTACCTGACTTGGAAGAGTTA 59.473 45.833 34.54 0.00 46.30 2.24
2669 2907 5.568620 ACCTGACTTGGAAGAGTTAACAT 57.431 39.130 8.61 0.00 0.00 2.71
2699 2937 3.845178 TGTACTAGGTCTTGTTCGCATG 58.155 45.455 0.00 0.00 0.00 4.06
2727 2965 3.056536 CACGAAGGTCAGAATTCCTCTCA 60.057 47.826 0.65 0.00 33.09 3.27
2736 2974 3.005684 CAGAATTCCTCTCAGGATCTCGG 59.994 52.174 0.65 0.00 45.34 4.63
2755 2993 2.699954 GGACATTGTGGAGTGTACAGG 58.300 52.381 0.00 0.00 0.00 4.00
2781 3019 1.911357 TCCCTGCCAGCCTGATATATG 59.089 52.381 0.00 0.00 0.00 1.78
2855 3093 7.488187 ACTTCAATATCTGATGAATGTTCCG 57.512 36.000 0.00 0.00 35.20 4.30
3050 3288 0.245539 TCCAAGTTCGAGTAAGGCGG 59.754 55.000 0.00 0.00 0.00 6.13
3425 3664 6.869315 TTCTTCCGTTTCACATCAAATACA 57.131 33.333 0.00 0.00 0.00 2.29
3430 3669 6.664515 TCCGTTTCACATCAAATACACTTTC 58.335 36.000 0.00 0.00 0.00 2.62
3452 3691 6.357579 TCATCTGGCCAAACATGTTTTAAT 57.642 33.333 21.10 6.15 0.00 1.40
3454 3693 7.319646 TCATCTGGCCAAACATGTTTTAATAC 58.680 34.615 21.10 10.39 0.00 1.89
3460 3699 6.931840 GGCCAAACATGTTTTAATACCTTTCA 59.068 34.615 21.10 0.00 0.00 2.69
3472 3711 9.781834 TTTTAATACCTTTCAAGTGCATAATCG 57.218 29.630 0.00 0.00 0.00 3.34
3488 3727 5.456822 GCATAATCGTTCCTTCTTTCAATGC 59.543 40.000 0.00 0.00 0.00 3.56
3779 4018 7.141363 TCGACCGCTTTATATTAAAGGAGTAC 58.859 38.462 8.61 0.00 0.00 2.73
3906 4156 8.552034 GTGGTACTTTCTTCTATTCATATGCAC 58.448 37.037 0.00 0.00 0.00 4.57
4019 4301 8.794335 AGAAATTATCACTCCTTCCTGTTTAC 57.206 34.615 0.00 0.00 0.00 2.01
4020 4302 8.606830 AGAAATTATCACTCCTTCCTGTTTACT 58.393 33.333 0.00 0.00 0.00 2.24
4021 4303 8.794335 AAATTATCACTCCTTCCTGTTTACTC 57.206 34.615 0.00 0.00 0.00 2.59
4022 4304 4.828072 ATCACTCCTTCCTGTTTACTCC 57.172 45.455 0.00 0.00 0.00 3.85
4023 4305 2.904434 TCACTCCTTCCTGTTTACTCCC 59.096 50.000 0.00 0.00 0.00 4.30
4024 4306 2.907042 CACTCCTTCCTGTTTACTCCCT 59.093 50.000 0.00 0.00 0.00 4.20
4025 4307 3.055747 CACTCCTTCCTGTTTACTCCCTC 60.056 52.174 0.00 0.00 0.00 4.30
4026 4308 2.502130 CTCCTTCCTGTTTACTCCCTCC 59.498 54.545 0.00 0.00 0.00 4.30
4027 4309 1.207329 CCTTCCTGTTTACTCCCTCCG 59.793 57.143 0.00 0.00 0.00 4.63
4028 4310 1.900486 CTTCCTGTTTACTCCCTCCGT 59.100 52.381 0.00 0.00 0.00 4.69
4029 4311 1.553706 TCCTGTTTACTCCCTCCGTC 58.446 55.000 0.00 0.00 0.00 4.79
4030 4312 0.535797 CCTGTTTACTCCCTCCGTCC 59.464 60.000 0.00 0.00 0.00 4.79
4031 4313 0.172803 CTGTTTACTCCCTCCGTCCG 59.827 60.000 0.00 0.00 0.00 4.79
4032 4314 1.252904 TGTTTACTCCCTCCGTCCGG 61.253 60.000 0.00 0.00 0.00 5.14
4033 4315 1.077265 TTTACTCCCTCCGTCCGGT 59.923 57.895 0.00 0.00 36.47 5.28
4034 4316 1.252904 TTTACTCCCTCCGTCCGGTG 61.253 60.000 0.00 3.10 36.47 4.94
4035 4317 2.141011 TTACTCCCTCCGTCCGGTGA 62.141 60.000 0.00 0.00 36.47 4.02
4036 4318 2.141011 TACTCCCTCCGTCCGGTGAA 62.141 60.000 0.00 0.00 36.47 3.18
4037 4319 2.678934 TCCCTCCGTCCGGTGAAG 60.679 66.667 0.00 0.00 36.47 3.02
4038 4320 2.678934 CCCTCCGTCCGGTGAAGA 60.679 66.667 0.00 0.00 36.47 2.87
4039 4321 2.711922 CCCTCCGTCCGGTGAAGAG 61.712 68.421 0.00 3.95 36.47 2.85
4040 4322 1.977544 CCTCCGTCCGGTGAAGAGT 60.978 63.158 0.00 0.00 36.47 3.24
4041 4323 1.213013 CTCCGTCCGGTGAAGAGTG 59.787 63.158 0.00 0.00 36.47 3.51
4042 4324 1.524863 CTCCGTCCGGTGAAGAGTGT 61.525 60.000 0.00 0.00 36.47 3.55
4043 4325 0.250858 TCCGTCCGGTGAAGAGTGTA 60.251 55.000 0.00 0.00 36.47 2.90
4044 4326 0.109412 CCGTCCGGTGAAGAGTGTAC 60.109 60.000 0.00 0.00 0.00 2.90
4045 4327 0.594602 CGTCCGGTGAAGAGTGTACA 59.405 55.000 0.00 0.00 0.00 2.90
4046 4328 1.201647 CGTCCGGTGAAGAGTGTACAT 59.798 52.381 0.00 0.00 0.00 2.29
4047 4329 2.731341 CGTCCGGTGAAGAGTGTACATC 60.731 54.545 0.00 0.00 0.00 3.06
4048 4330 2.492484 GTCCGGTGAAGAGTGTACATCT 59.508 50.000 0.00 0.27 0.00 2.90
4049 4331 3.693085 GTCCGGTGAAGAGTGTACATCTA 59.307 47.826 0.00 0.00 0.00 1.98
4050 4332 3.945921 TCCGGTGAAGAGTGTACATCTAG 59.054 47.826 0.00 0.00 0.00 2.43
4051 4333 3.945921 CCGGTGAAGAGTGTACATCTAGA 59.054 47.826 0.00 0.00 0.00 2.43
4052 4334 4.398358 CCGGTGAAGAGTGTACATCTAGAA 59.602 45.833 0.00 0.00 0.00 2.10
4053 4335 5.105877 CCGGTGAAGAGTGTACATCTAGAAA 60.106 44.000 0.00 0.00 0.00 2.52
4054 4336 6.405953 CCGGTGAAGAGTGTACATCTAGAAAT 60.406 42.308 0.00 0.00 0.00 2.17
4055 4337 7.036220 CGGTGAAGAGTGTACATCTAGAAATT 58.964 38.462 0.00 0.00 0.00 1.82
4056 4338 7.545965 CGGTGAAGAGTGTACATCTAGAAATTT 59.454 37.037 0.00 0.00 0.00 1.82
4057 4339 9.220767 GGTGAAGAGTGTACATCTAGAAATTTT 57.779 33.333 0.00 0.00 0.00 1.82
4063 4345 9.871238 GAGTGTACATCTAGAAATTTTAGGACA 57.129 33.333 0.00 0.00 0.00 4.02
4079 4361 8.934023 TTTTAGGACAAATTATGGAGTTGAGT 57.066 30.769 0.00 0.00 36.83 3.41
4083 4365 8.934023 AGGACAAATTATGGAGTTGAGTAAAA 57.066 30.769 0.00 0.00 36.83 1.52
4084 4366 9.014297 AGGACAAATTATGGAGTTGAGTAAAAG 57.986 33.333 0.00 0.00 36.83 2.27
4085 4367 9.010029 GGACAAATTATGGAGTTGAGTAAAAGA 57.990 33.333 0.00 0.00 36.83 2.52
4088 4370 9.294030 CAAATTATGGAGTTGAGTAAAAGATGC 57.706 33.333 0.00 0.00 35.41 3.91
4089 4371 8.579850 AATTATGGAGTTGAGTAAAAGATGCA 57.420 30.769 0.00 0.00 0.00 3.96
4090 4372 8.757982 ATTATGGAGTTGAGTAAAAGATGCAT 57.242 30.769 0.00 0.00 0.00 3.96
4091 4373 8.579850 TTATGGAGTTGAGTAAAAGATGCATT 57.420 30.769 0.00 0.00 0.00 3.56
4092 4374 6.258230 TGGAGTTGAGTAAAAGATGCATTG 57.742 37.500 0.00 0.00 0.00 2.82
4093 4375 5.183713 TGGAGTTGAGTAAAAGATGCATTGG 59.816 40.000 0.00 0.00 0.00 3.16
4094 4376 5.415701 GGAGTTGAGTAAAAGATGCATTGGA 59.584 40.000 0.00 0.00 0.00 3.53
4095 4377 6.071952 GGAGTTGAGTAAAAGATGCATTGGAA 60.072 38.462 0.00 0.00 0.00 3.53
4096 4378 6.917533 AGTTGAGTAAAAGATGCATTGGAAG 58.082 36.000 0.00 0.00 0.00 3.46
4097 4379 5.902613 TGAGTAAAAGATGCATTGGAAGG 57.097 39.130 0.00 0.00 0.00 3.46
4098 4380 5.324409 TGAGTAAAAGATGCATTGGAAGGT 58.676 37.500 0.00 0.00 0.00 3.50
4099 4381 5.183713 TGAGTAAAAGATGCATTGGAAGGTG 59.816 40.000 0.00 0.00 0.00 4.00
4100 4382 3.323751 AAAAGATGCATTGGAAGGTGC 57.676 42.857 0.00 0.00 41.61 5.01
4104 4386 4.584688 GCATTGGAAGGTGCAAGC 57.415 55.556 0.00 0.00 40.94 4.01
4105 4387 1.079612 GCATTGGAAGGTGCAAGCC 60.080 57.895 0.00 0.00 40.94 4.35
4106 4388 1.818959 GCATTGGAAGGTGCAAGCCA 61.819 55.000 0.00 0.00 40.94 4.75
4107 4389 0.037975 CATTGGAAGGTGCAAGCCAC 60.038 55.000 0.00 0.00 43.90 5.01
4114 4396 4.730487 GTGCAAGCCACCATCTCT 57.270 55.556 0.00 0.00 38.55 3.10
4115 4397 2.475666 GTGCAAGCCACCATCTCTC 58.524 57.895 0.00 0.00 38.55 3.20
4116 4398 0.035630 GTGCAAGCCACCATCTCTCT 60.036 55.000 0.00 0.00 38.55 3.10
4117 4399 0.251354 TGCAAGCCACCATCTCTCTC 59.749 55.000 0.00 0.00 0.00 3.20
4118 4400 0.463474 GCAAGCCACCATCTCTCTCC 60.463 60.000 0.00 0.00 0.00 3.71
4119 4401 1.202330 CAAGCCACCATCTCTCTCCT 58.798 55.000 0.00 0.00 0.00 3.69
4120 4402 1.138661 CAAGCCACCATCTCTCTCCTC 59.861 57.143 0.00 0.00 0.00 3.71
4121 4403 0.636101 AGCCACCATCTCTCTCCTCT 59.364 55.000 0.00 0.00 0.00 3.69
4122 4404 1.008206 AGCCACCATCTCTCTCCTCTT 59.992 52.381 0.00 0.00 0.00 2.85
4123 4405 1.836802 GCCACCATCTCTCTCCTCTTT 59.163 52.381 0.00 0.00 0.00 2.52
4124 4406 3.034635 GCCACCATCTCTCTCCTCTTTA 58.965 50.000 0.00 0.00 0.00 1.85
4125 4407 3.452627 GCCACCATCTCTCTCCTCTTTAA 59.547 47.826 0.00 0.00 0.00 1.52
4126 4408 4.102367 GCCACCATCTCTCTCCTCTTTAAT 59.898 45.833 0.00 0.00 0.00 1.40
4127 4409 5.397334 GCCACCATCTCTCTCCTCTTTAATT 60.397 44.000 0.00 0.00 0.00 1.40
4128 4410 6.183361 GCCACCATCTCTCTCCTCTTTAATTA 60.183 42.308 0.00 0.00 0.00 1.40
4129 4411 7.213678 CCACCATCTCTCTCCTCTTTAATTAC 58.786 42.308 0.00 0.00 0.00 1.89
4130 4412 7.213678 CACCATCTCTCTCCTCTTTAATTACC 58.786 42.308 0.00 0.00 0.00 2.85
4131 4413 6.327887 ACCATCTCTCTCCTCTTTAATTACCC 59.672 42.308 0.00 0.00 0.00 3.69
4132 4414 6.327626 CCATCTCTCTCCTCTTTAATTACCCA 59.672 42.308 0.00 0.00 0.00 4.51
4133 4415 7.147479 CCATCTCTCTCCTCTTTAATTACCCAA 60.147 40.741 0.00 0.00 0.00 4.12
4134 4416 7.184067 TCTCTCTCCTCTTTAATTACCCAAC 57.816 40.000 0.00 0.00 0.00 3.77
4135 4417 6.156429 TCTCTCTCCTCTTTAATTACCCAACC 59.844 42.308 0.00 0.00 0.00 3.77
4136 4418 5.191124 TCTCTCCTCTTTAATTACCCAACCC 59.809 44.000 0.00 0.00 0.00 4.11
4137 4419 4.228895 TCTCCTCTTTAATTACCCAACCCC 59.771 45.833 0.00 0.00 0.00 4.95
4138 4420 3.270169 TCCTCTTTAATTACCCAACCCCC 59.730 47.826 0.00 0.00 0.00 5.40
4139 4421 3.011934 CCTCTTTAATTACCCAACCCCCA 59.988 47.826 0.00 0.00 0.00 4.96
4140 4422 4.511294 CCTCTTTAATTACCCAACCCCCAA 60.511 45.833 0.00 0.00 0.00 4.12
4141 4423 5.277250 CTCTTTAATTACCCAACCCCCAAT 58.723 41.667 0.00 0.00 0.00 3.16
4142 4424 5.026790 TCTTTAATTACCCAACCCCCAATG 58.973 41.667 0.00 0.00 0.00 2.82
4143 4425 4.694280 TTAATTACCCAACCCCCAATGA 57.306 40.909 0.00 0.00 0.00 2.57
4144 4426 2.846665 ATTACCCAACCCCCAATGAG 57.153 50.000 0.00 0.00 0.00 2.90
4145 4427 0.040499 TTACCCAACCCCCAATGAGC 59.960 55.000 0.00 0.00 0.00 4.26
4146 4428 0.849094 TACCCAACCCCCAATGAGCT 60.849 55.000 0.00 0.00 0.00 4.09
4147 4429 0.849094 ACCCAACCCCCAATGAGCTA 60.849 55.000 0.00 0.00 0.00 3.32
4148 4430 0.334676 CCCAACCCCCAATGAGCTAA 59.665 55.000 0.00 0.00 0.00 3.09
4149 4431 1.686115 CCCAACCCCCAATGAGCTAAG 60.686 57.143 0.00 0.00 0.00 2.18
4150 4432 1.005924 CCAACCCCCAATGAGCTAAGT 59.994 52.381 0.00 0.00 0.00 2.24
4151 4433 2.094675 CAACCCCCAATGAGCTAAGTG 58.905 52.381 0.00 0.00 0.00 3.16
4152 4434 0.034089 ACCCCCAATGAGCTAAGTGC 60.034 55.000 0.00 0.00 43.29 4.40
4153 4435 0.034186 CCCCCAATGAGCTAAGTGCA 60.034 55.000 0.00 0.00 45.94 4.57
4154 4436 1.410648 CCCCCAATGAGCTAAGTGCAT 60.411 52.381 0.00 0.00 45.94 3.96
4155 4437 1.679680 CCCCAATGAGCTAAGTGCATG 59.320 52.381 0.00 0.00 45.94 4.06
4156 4438 2.372264 CCCAATGAGCTAAGTGCATGT 58.628 47.619 0.00 0.00 45.94 3.21
4157 4439 3.544684 CCCAATGAGCTAAGTGCATGTA 58.455 45.455 0.00 0.00 45.94 2.29
4158 4440 4.139786 CCCAATGAGCTAAGTGCATGTAT 58.860 43.478 0.00 0.00 45.94 2.29
4159 4441 5.308014 CCCAATGAGCTAAGTGCATGTATA 58.692 41.667 0.00 0.00 45.94 1.47
4160 4442 5.764686 CCCAATGAGCTAAGTGCATGTATAA 59.235 40.000 0.00 0.00 45.94 0.98
4161 4443 6.262944 CCCAATGAGCTAAGTGCATGTATAAA 59.737 38.462 0.00 0.00 45.94 1.40
4162 4444 7.040201 CCCAATGAGCTAAGTGCATGTATAAAT 60.040 37.037 0.00 0.00 45.94 1.40
4163 4445 8.355169 CCAATGAGCTAAGTGCATGTATAAATT 58.645 33.333 0.00 0.00 45.94 1.82
4167 4449 9.830975 TGAGCTAAGTGCATGTATAAATTAAGA 57.169 29.630 0.00 0.00 45.94 2.10
4173 4455 9.461312 AAGTGCATGTATAAATTAAGAAGACCA 57.539 29.630 0.00 0.00 0.00 4.02
4174 4456 9.632638 AGTGCATGTATAAATTAAGAAGACCAT 57.367 29.630 0.00 0.00 0.00 3.55
4175 4457 9.669353 GTGCATGTATAAATTAAGAAGACCATG 57.331 33.333 0.00 0.00 0.00 3.66
4176 4458 9.407380 TGCATGTATAAATTAAGAAGACCATGT 57.593 29.630 0.00 0.00 0.00 3.21
4177 4459 9.669353 GCATGTATAAATTAAGAAGACCATGTG 57.331 33.333 0.00 0.00 0.00 3.21
4185 4467 6.985188 TTAAGAAGACCATGTGTAGATTGC 57.015 37.500 0.00 0.00 0.00 3.56
4186 4468 4.833478 AGAAGACCATGTGTAGATTGCT 57.167 40.909 0.00 0.00 0.00 3.91
4187 4469 5.939764 AGAAGACCATGTGTAGATTGCTA 57.060 39.130 0.00 0.00 0.00 3.49
4188 4470 6.491714 AGAAGACCATGTGTAGATTGCTAT 57.508 37.500 0.00 0.00 0.00 2.97
4189 4471 6.893583 AGAAGACCATGTGTAGATTGCTATT 58.106 36.000 0.00 0.00 0.00 1.73
4190 4472 6.765036 AGAAGACCATGTGTAGATTGCTATTG 59.235 38.462 0.00 0.00 0.00 1.90
4191 4473 5.371526 AGACCATGTGTAGATTGCTATTGG 58.628 41.667 0.00 0.00 0.00 3.16
4192 4474 5.104360 AGACCATGTGTAGATTGCTATTGGT 60.104 40.000 0.00 0.00 34.25 3.67
4193 4475 5.126067 ACCATGTGTAGATTGCTATTGGTC 58.874 41.667 0.00 0.00 29.85 4.02
4194 4476 5.104360 ACCATGTGTAGATTGCTATTGGTCT 60.104 40.000 0.00 0.00 29.85 3.85
4195 4477 5.824624 CCATGTGTAGATTGCTATTGGTCTT 59.175 40.000 0.00 0.00 0.00 3.01
4196 4478 6.238566 CCATGTGTAGATTGCTATTGGTCTTG 60.239 42.308 0.00 0.00 0.00 3.02
4197 4479 6.048732 TGTGTAGATTGCTATTGGTCTTGA 57.951 37.500 0.00 0.00 0.00 3.02
4198 4480 6.653020 TGTGTAGATTGCTATTGGTCTTGAT 58.347 36.000 0.00 0.00 0.00 2.57
4199 4481 7.112122 TGTGTAGATTGCTATTGGTCTTGATT 58.888 34.615 0.00 0.00 0.00 2.57
4200 4482 8.264347 TGTGTAGATTGCTATTGGTCTTGATTA 58.736 33.333 0.00 0.00 0.00 1.75
4201 4483 8.552034 GTGTAGATTGCTATTGGTCTTGATTAC 58.448 37.037 0.00 0.00 0.00 1.89
4202 4484 7.715249 TGTAGATTGCTATTGGTCTTGATTACC 59.285 37.037 0.00 0.00 37.53 2.85
4203 4485 5.760253 AGATTGCTATTGGTCTTGATTACCG 59.240 40.000 0.00 0.00 40.08 4.02
4204 4486 4.481368 TGCTATTGGTCTTGATTACCGT 57.519 40.909 0.00 0.00 40.08 4.83
4205 4487 4.188462 TGCTATTGGTCTTGATTACCGTG 58.812 43.478 0.00 0.00 40.08 4.94
4206 4488 4.189231 GCTATTGGTCTTGATTACCGTGT 58.811 43.478 0.00 0.00 40.08 4.49
4207 4489 4.034048 GCTATTGGTCTTGATTACCGTGTG 59.966 45.833 0.00 0.00 40.08 3.82
4208 4490 3.755112 TTGGTCTTGATTACCGTGTGA 57.245 42.857 0.00 0.00 40.08 3.58
4209 4491 3.973206 TGGTCTTGATTACCGTGTGAT 57.027 42.857 0.00 0.00 40.08 3.06
4210 4492 3.595173 TGGTCTTGATTACCGTGTGATG 58.405 45.455 0.00 0.00 40.08 3.07
4211 4493 3.259625 TGGTCTTGATTACCGTGTGATGA 59.740 43.478 0.00 0.00 40.08 2.92
4212 4494 3.865745 GGTCTTGATTACCGTGTGATGAG 59.134 47.826 0.00 0.00 0.00 2.90
4213 4495 4.381612 GGTCTTGATTACCGTGTGATGAGA 60.382 45.833 0.00 0.00 0.00 3.27
4214 4496 4.800993 GTCTTGATTACCGTGTGATGAGAG 59.199 45.833 0.00 0.00 0.00 3.20
4215 4497 4.705023 TCTTGATTACCGTGTGATGAGAGA 59.295 41.667 0.00 0.00 0.00 3.10
4216 4498 4.639135 TGATTACCGTGTGATGAGAGAG 57.361 45.455 0.00 0.00 0.00 3.20
4217 4499 4.270008 TGATTACCGTGTGATGAGAGAGA 58.730 43.478 0.00 0.00 0.00 3.10
4218 4500 4.705023 TGATTACCGTGTGATGAGAGAGAA 59.295 41.667 0.00 0.00 0.00 2.87
4219 4501 4.703645 TTACCGTGTGATGAGAGAGAAG 57.296 45.455 0.00 0.00 0.00 2.85
4220 4502 2.520069 ACCGTGTGATGAGAGAGAAGT 58.480 47.619 0.00 0.00 0.00 3.01
4221 4503 3.687125 ACCGTGTGATGAGAGAGAAGTA 58.313 45.455 0.00 0.00 0.00 2.24
4222 4504 4.274147 ACCGTGTGATGAGAGAGAAGTAT 58.726 43.478 0.00 0.00 0.00 2.12
4223 4505 4.707448 ACCGTGTGATGAGAGAGAAGTATT 59.293 41.667 0.00 0.00 0.00 1.89
4224 4506 5.186021 ACCGTGTGATGAGAGAGAAGTATTT 59.814 40.000 0.00 0.00 0.00 1.40
4225 4507 6.102663 CCGTGTGATGAGAGAGAAGTATTTT 58.897 40.000 0.00 0.00 0.00 1.82
4226 4508 6.254589 CCGTGTGATGAGAGAGAAGTATTTTC 59.745 42.308 0.00 0.00 0.00 2.29
4227 4509 6.254589 CGTGTGATGAGAGAGAAGTATTTTCC 59.745 42.308 0.00 0.00 0.00 3.13
4228 4510 7.327214 GTGTGATGAGAGAGAAGTATTTTCCT 58.673 38.462 0.00 0.00 0.00 3.36
4229 4511 8.470805 GTGTGATGAGAGAGAAGTATTTTCCTA 58.529 37.037 0.00 0.00 0.00 2.94
4230 4512 8.470805 TGTGATGAGAGAGAAGTATTTTCCTAC 58.529 37.037 0.00 0.00 0.00 3.18
4231 4513 8.691797 GTGATGAGAGAGAAGTATTTTCCTACT 58.308 37.037 0.00 0.00 33.34 2.57
4232 4514 9.261035 TGATGAGAGAGAAGTATTTTCCTACTT 57.739 33.333 0.00 0.00 43.04 2.24
4250 4532 9.589461 TTCCTACTTTAAATTACATTGGGAACA 57.411 29.630 0.00 0.00 39.83 3.18
4251 4533 9.762381 TCCTACTTTAAATTACATTGGGAACAT 57.238 29.630 0.00 0.00 42.32 2.71
4255 4537 8.100164 ACTTTAAATTACATTGGGAACATTGGG 58.900 33.333 0.00 0.00 44.09 4.12
4256 4538 7.798710 TTAAATTACATTGGGAACATTGGGA 57.201 32.000 0.00 0.00 44.09 4.37
4257 4539 6.694445 AAATTACATTGGGAACATTGGGAA 57.306 33.333 0.00 0.00 44.09 3.97
4258 4540 5.937975 ATTACATTGGGAACATTGGGAAG 57.062 39.130 0.00 0.00 44.09 3.46
4259 4541 3.541242 ACATTGGGAACATTGGGAAGA 57.459 42.857 0.00 0.00 44.09 2.87
4260 4542 4.065214 ACATTGGGAACATTGGGAAGAT 57.935 40.909 0.00 0.00 44.09 2.40
4261 4543 5.205517 ACATTGGGAACATTGGGAAGATA 57.794 39.130 0.00 0.00 44.09 1.98
4262 4544 5.203528 ACATTGGGAACATTGGGAAGATAG 58.796 41.667 0.00 0.00 44.09 2.08
4263 4545 5.044179 ACATTGGGAACATTGGGAAGATAGA 60.044 40.000 0.00 0.00 44.09 1.98
4264 4546 5.528600 TTGGGAACATTGGGAAGATAGAA 57.471 39.130 0.00 0.00 42.32 2.10
4265 4547 5.116084 TGGGAACATTGGGAAGATAGAAG 57.884 43.478 0.00 0.00 33.40 2.85
4266 4548 4.540099 TGGGAACATTGGGAAGATAGAAGT 59.460 41.667 0.00 0.00 33.40 3.01
4267 4549 5.729229 TGGGAACATTGGGAAGATAGAAGTA 59.271 40.000 0.00 0.00 33.40 2.24
4268 4550 6.056236 GGGAACATTGGGAAGATAGAAGTAC 58.944 44.000 0.00 0.00 0.00 2.73
4269 4551 6.352737 GGGAACATTGGGAAGATAGAAGTACA 60.353 42.308 0.00 0.00 0.00 2.90
4270 4552 6.539103 GGAACATTGGGAAGATAGAAGTACAC 59.461 42.308 0.00 0.00 0.00 2.90
4271 4553 6.875972 ACATTGGGAAGATAGAAGTACACT 57.124 37.500 0.00 0.00 0.00 3.55
4272 4554 7.259088 ACATTGGGAAGATAGAAGTACACTT 57.741 36.000 0.00 0.00 39.23 3.16
4273 4555 7.690256 ACATTGGGAAGATAGAAGTACACTTT 58.310 34.615 0.00 0.00 36.11 2.66
4274 4556 8.164070 ACATTGGGAAGATAGAAGTACACTTTT 58.836 33.333 0.00 0.00 36.11 2.27
4275 4557 9.014297 CATTGGGAAGATAGAAGTACACTTTTT 57.986 33.333 0.00 0.00 36.11 1.94
4297 4579 7.769272 TTTTGTGGACAAATTTTGAAGCTAG 57.231 32.000 15.81 0.00 44.30 3.42
4298 4580 6.707440 TTGTGGACAAATTTTGAAGCTAGA 57.293 33.333 15.81 0.00 32.11 2.43
4299 4581 6.899393 TGTGGACAAATTTTGAAGCTAGAT 57.101 33.333 15.81 0.00 0.00 1.98
4300 4582 6.680810 TGTGGACAAATTTTGAAGCTAGATG 58.319 36.000 15.81 0.00 0.00 2.90
4301 4583 6.265196 TGTGGACAAATTTTGAAGCTAGATGT 59.735 34.615 15.81 0.00 0.00 3.06
4302 4584 7.446931 TGTGGACAAATTTTGAAGCTAGATGTA 59.553 33.333 15.81 0.00 0.00 2.29
4303 4585 7.750903 GTGGACAAATTTTGAAGCTAGATGTAC 59.249 37.037 15.81 0.00 0.00 2.90
4304 4586 7.446931 TGGACAAATTTTGAAGCTAGATGTACA 59.553 33.333 15.81 0.00 0.00 2.90
4305 4587 7.750903 GGACAAATTTTGAAGCTAGATGTACAC 59.249 37.037 15.81 0.00 0.00 2.90
4306 4588 8.396272 ACAAATTTTGAAGCTAGATGTACACT 57.604 30.769 15.81 0.13 0.00 3.55
4307 4589 8.507249 ACAAATTTTGAAGCTAGATGTACACTC 58.493 33.333 15.81 0.00 0.00 3.51
4308 4590 8.725148 CAAATTTTGAAGCTAGATGTACACTCT 58.275 33.333 0.00 5.42 0.00 3.24
4309 4591 8.854614 AATTTTGAAGCTAGATGTACACTCTT 57.145 30.769 0.00 0.00 0.00 2.85
4310 4592 7.891183 TTTTGAAGCTAGATGTACACTCTTC 57.109 36.000 0.00 7.46 0.00 2.87
4311 4593 6.590234 TTGAAGCTAGATGTACACTCTTCA 57.410 37.500 16.38 16.38 37.32 3.02
4312 4594 5.955488 TGAAGCTAGATGTACACTCTTCAC 58.045 41.667 16.38 7.68 35.12 3.18
4313 4595 4.993029 AGCTAGATGTACACTCTTCACC 57.007 45.455 0.00 0.00 0.00 4.02
4314 4596 3.378742 AGCTAGATGTACACTCTTCACCG 59.621 47.826 0.00 0.00 0.00 4.94
4315 4597 3.489398 GCTAGATGTACACTCTTCACCGG 60.489 52.174 0.00 0.00 0.00 5.28
4316 4598 2.803956 AGATGTACACTCTTCACCGGA 58.196 47.619 9.46 0.00 0.00 5.14
4317 4599 2.492484 AGATGTACACTCTTCACCGGAC 59.508 50.000 9.46 0.00 0.00 4.79
4318 4600 0.594602 TGTACACTCTTCACCGGACG 59.405 55.000 9.46 0.00 0.00 4.79
4319 4601 0.109412 GTACACTCTTCACCGGACGG 60.109 60.000 9.46 9.56 42.03 4.79
4320 4602 0.250858 TACACTCTTCACCGGACGGA 60.251 55.000 18.80 0.00 38.96 4.69
4321 4603 1.213013 CACTCTTCACCGGACGGAG 59.787 63.158 18.80 10.03 38.96 4.63
4322 4604 1.977544 ACTCTTCACCGGACGGAGG 60.978 63.158 18.80 9.15 38.96 4.30
4323 4605 2.678934 TCTTCACCGGACGGAGGG 60.679 66.667 18.80 6.62 38.96 4.30
4324 4606 2.678934 CTTCACCGGACGGAGGGA 60.679 66.667 18.80 8.89 38.96 4.20
4325 4607 2.678934 TTCACCGGACGGAGGGAG 60.679 66.667 18.80 2.08 38.96 4.30
4366 4648 8.187354 TGCGAATAAAATCTGACGTATTGTTA 57.813 30.769 0.00 0.00 0.00 2.41
4443 4742 2.107950 TGCCTTTACATCCTTGTCCG 57.892 50.000 0.00 0.00 37.28 4.79
4499 4798 2.731572 AGTCCAATGCTGCTTTGCTAT 58.268 42.857 19.45 7.01 0.00 2.97
4607 4914 3.523606 TGCAATTATCCAAATGCGCTT 57.476 38.095 9.73 0.00 42.44 4.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.060980 ACCCGAGAGCTTGCCCTAG 61.061 63.158 0.00 0.00 0.00 3.02
25 26 3.710722 CACCCGAGAGCTTGCCCT 61.711 66.667 0.00 0.00 0.00 5.19
37 38 0.877649 CGAGCATTCTGGATCACCCG 60.878 60.000 0.00 0.00 37.93 5.28
38 39 0.533755 CCGAGCATTCTGGATCACCC 60.534 60.000 0.00 0.00 34.81 4.61
44 45 0.904649 ATGTGACCGAGCATTCTGGA 59.095 50.000 0.00 0.00 0.00 3.86
50 51 1.200716 CAAGCAAATGTGACCGAGCAT 59.799 47.619 0.00 0.00 0.00 3.79
51 52 0.592637 CAAGCAAATGTGACCGAGCA 59.407 50.000 0.00 0.00 0.00 4.26
52 53 0.593128 ACAAGCAAATGTGACCGAGC 59.407 50.000 0.00 0.00 30.82 5.03
82 84 1.078347 GGGCCTGGGGTCAATGAAA 59.922 57.895 0.84 0.00 0.00 2.69
95 97 2.681064 ATTGCATGCGTTGGGCCT 60.681 55.556 14.09 0.00 42.61 5.19
98 100 1.066002 CTAAGGATTGCATGCGTTGGG 59.934 52.381 14.09 0.00 0.00 4.12
113 115 6.231211 TCTTTACAAAGTTCTCTGCCTAAGG 58.769 40.000 1.86 0.00 37.31 2.69
119 121 7.252965 AGTTTCTCTTTACAAAGTTCTCTGC 57.747 36.000 1.86 0.00 37.31 4.26
136 138 5.661458 TGGGTCATCGAAGAATAGTTTCTC 58.339 41.667 0.00 0.00 41.42 2.87
181 184 2.182030 CTTCCGCCCACGAGACTC 59.818 66.667 0.00 0.00 43.93 3.36
193 196 0.474184 AAGATATGCCCCCACTTCCG 59.526 55.000 0.00 0.00 0.00 4.30
270 422 1.137479 CCACATGGCAATGGGATTCAC 59.863 52.381 4.36 0.00 39.84 3.18
285 437 2.306255 GACGACATACGCCCCCACAT 62.306 60.000 0.00 0.00 46.94 3.21
310 462 2.015456 TTCAAGAGAGAGTGGCTCCA 57.985 50.000 0.00 0.00 45.10 3.86
314 466 3.006247 GGTCATTTCAAGAGAGAGTGGC 58.994 50.000 0.00 0.00 0.00 5.01
315 467 4.277515 TGGTCATTTCAAGAGAGAGTGG 57.722 45.455 0.00 0.00 0.00 4.00
356 508 7.083858 TCTCATAAATTTTGTTGGCTTTCTCG 58.916 34.615 0.00 0.00 0.00 4.04
377 529 6.746120 AGAGCGTTTAGTTCTAACTTTCTCA 58.254 36.000 0.00 0.00 38.71 3.27
413 565 2.370189 GGATGGTGATTACTCCCTCTGG 59.630 54.545 0.00 0.00 0.00 3.86
425 577 1.705997 GGTTAGGCGGGGATGGTGAT 61.706 60.000 0.00 0.00 0.00 3.06
427 579 2.192175 GGTTAGGCGGGGATGGTG 59.808 66.667 0.00 0.00 0.00 4.17
438 593 1.588139 CGCGCTTCTACGGGTTAGG 60.588 63.158 5.56 0.00 40.69 2.69
454 609 3.807631 TATCACATCGCCTGCCCGC 62.808 63.158 0.00 0.00 0.00 6.13
455 610 1.665916 CTATCACATCGCCTGCCCG 60.666 63.158 0.00 0.00 0.00 6.13
456 611 0.106708 TTCTATCACATCGCCTGCCC 59.893 55.000 0.00 0.00 0.00 5.36
457 612 1.221414 GTTCTATCACATCGCCTGCC 58.779 55.000 0.00 0.00 0.00 4.85
458 613 0.855349 CGTTCTATCACATCGCCTGC 59.145 55.000 0.00 0.00 0.00 4.85
459 614 2.033424 TCTCGTTCTATCACATCGCCTG 59.967 50.000 0.00 0.00 0.00 4.85
460 615 2.298610 TCTCGTTCTATCACATCGCCT 58.701 47.619 0.00 0.00 0.00 5.52
461 616 2.776312 TCTCGTTCTATCACATCGCC 57.224 50.000 0.00 0.00 0.00 5.54
487 642 8.956426 ACATTCCTCGCTATTTTTCTCATAAAA 58.044 29.630 0.00 0.00 0.00 1.52
489 644 7.042725 CGACATTCCTCGCTATTTTTCTCATAA 60.043 37.037 0.00 0.00 0.00 1.90
490 645 6.420903 CGACATTCCTCGCTATTTTTCTCATA 59.579 38.462 0.00 0.00 0.00 2.15
491 646 5.235186 CGACATTCCTCGCTATTTTTCTCAT 59.765 40.000 0.00 0.00 0.00 2.90
492 647 4.566759 CGACATTCCTCGCTATTTTTCTCA 59.433 41.667 0.00 0.00 0.00 3.27
493 648 4.567159 ACGACATTCCTCGCTATTTTTCTC 59.433 41.667 0.00 0.00 37.15 2.87
494 649 4.504858 ACGACATTCCTCGCTATTTTTCT 58.495 39.130 0.00 0.00 37.15 2.52
495 650 4.859629 ACGACATTCCTCGCTATTTTTC 57.140 40.909 0.00 0.00 37.15 2.29
504 659 4.735662 TTGGTAAAAACGACATTCCTCG 57.264 40.909 0.00 0.00 39.68 4.63
530 685 7.309012 GGGTAGGATTTTGGTTGAAGACTTTAC 60.309 40.741 0.00 0.00 0.00 2.01
531 686 6.717997 GGGTAGGATTTTGGTTGAAGACTTTA 59.282 38.462 0.00 0.00 0.00 1.85
579 734 5.421056 GGTGATTCTGGTGGGATATATACGA 59.579 44.000 0.00 0.00 0.00 3.43
580 735 5.395324 GGGTGATTCTGGTGGGATATATACG 60.395 48.000 0.00 0.00 0.00 3.06
581 736 5.104485 GGGGTGATTCTGGTGGGATATATAC 60.104 48.000 0.00 0.00 0.00 1.47
587 743 1.289244 GGGGGTGATTCTGGTGGGAT 61.289 60.000 0.00 0.00 0.00 3.85
615 771 2.725203 TTTGAACGGAGCGACCAGGG 62.725 60.000 0.00 0.00 38.90 4.45
619 775 0.234884 CTGTTTTGAACGGAGCGACC 59.765 55.000 0.00 0.00 40.26 4.79
628 786 2.031944 GCGTCTCCTTCCTGTTTTGAAC 60.032 50.000 0.00 0.00 0.00 3.18
644 802 3.552890 GCTTTTTGATTTTGAGGGCGTCT 60.553 43.478 8.82 0.00 0.00 4.18
650 808 6.017687 CCCTTTTGAGCTTTTTGATTTTGAGG 60.018 38.462 0.00 0.00 0.00 3.86
651 809 6.017687 CCCCTTTTGAGCTTTTTGATTTTGAG 60.018 38.462 0.00 0.00 0.00 3.02
652 810 5.821995 CCCCTTTTGAGCTTTTTGATTTTGA 59.178 36.000 0.00 0.00 0.00 2.69
653 811 5.506151 GCCCCTTTTGAGCTTTTTGATTTTG 60.506 40.000 0.00 0.00 0.00 2.44
654 812 4.580167 GCCCCTTTTGAGCTTTTTGATTTT 59.420 37.500 0.00 0.00 0.00 1.82
655 813 4.136796 GCCCCTTTTGAGCTTTTTGATTT 58.863 39.130 0.00 0.00 0.00 2.17
656 814 3.743521 GCCCCTTTTGAGCTTTTTGATT 58.256 40.909 0.00 0.00 0.00 2.57
660 818 0.249868 GCGCCCCTTTTGAGCTTTTT 60.250 50.000 0.00 0.00 0.00 1.94
661 819 1.115326 AGCGCCCCTTTTGAGCTTTT 61.115 50.000 2.29 0.00 34.05 2.27
662 820 1.527433 GAGCGCCCCTTTTGAGCTTT 61.527 55.000 2.29 0.00 38.39 3.51
665 823 3.443925 GGAGCGCCCCTTTTGAGC 61.444 66.667 2.29 0.00 0.00 4.26
666 824 2.876368 ATCGGAGCGCCCCTTTTGAG 62.876 60.000 6.33 0.00 0.00 3.02
667 825 2.966732 ATCGGAGCGCCCCTTTTGA 61.967 57.895 6.33 0.00 0.00 2.69
668 826 2.438434 ATCGGAGCGCCCCTTTTG 60.438 61.111 6.33 0.00 0.00 2.44
669 827 2.438434 CATCGGAGCGCCCCTTTT 60.438 61.111 6.33 0.00 0.00 2.27
739 903 4.057428 GCGGAGTCAGCGAGTGGT 62.057 66.667 0.00 0.00 0.00 4.16
814 996 2.442458 GGAGGAGGAGGACGGGAC 60.442 72.222 0.00 0.00 0.00 4.46
815 997 2.617538 AGGAGGAGGAGGACGGGA 60.618 66.667 0.00 0.00 0.00 5.14
816 998 2.123640 GAGGAGGAGGAGGACGGG 60.124 72.222 0.00 0.00 0.00 5.28
817 999 2.123640 GGAGGAGGAGGAGGACGG 60.124 72.222 0.00 0.00 0.00 4.79
818 1000 2.123640 GGGAGGAGGAGGAGGACG 60.124 72.222 0.00 0.00 0.00 4.79
819 1001 1.892441 AAGGGGAGGAGGAGGAGGAC 61.892 65.000 0.00 0.00 0.00 3.85
820 1002 0.254638 TAAGGGGAGGAGGAGGAGGA 60.255 60.000 0.00 0.00 0.00 3.71
821 1003 0.642710 TTAAGGGGAGGAGGAGGAGG 59.357 60.000 0.00 0.00 0.00 4.30
822 1004 2.120312 GTTTAAGGGGAGGAGGAGGAG 58.880 57.143 0.00 0.00 0.00 3.69
823 1005 1.274242 GGTTTAAGGGGAGGAGGAGGA 60.274 57.143 0.00 0.00 0.00 3.71
824 1006 1.214217 GGTTTAAGGGGAGGAGGAGG 58.786 60.000 0.00 0.00 0.00 4.30
825 1007 2.120312 GAGGTTTAAGGGGAGGAGGAG 58.880 57.143 0.00 0.00 0.00 3.69
910 1100 1.224722 GCGAGATTTCATCCGCCTCC 61.225 60.000 0.00 0.00 40.56 4.30
912 1102 4.445699 GCGAGATTTCATCCGCCT 57.554 55.556 0.00 0.00 40.56 5.52
980 1171 1.731324 CCCCGTCCTCCTATCCTCCT 61.731 65.000 0.00 0.00 0.00 3.69
981 1172 1.228925 CCCCGTCCTCCTATCCTCC 60.229 68.421 0.00 0.00 0.00 4.30
986 1177 1.158705 CCCATCCCCGTCCTCCTAT 59.841 63.158 0.00 0.00 0.00 2.57
987 1178 2.612836 CCCATCCCCGTCCTCCTA 59.387 66.667 0.00 0.00 0.00 2.94
1094 1285 1.491668 GGGGAAACAAACCTTGGTGT 58.508 50.000 0.00 0.00 34.12 4.16
1096 1287 0.639943 AGGGGGAAACAAACCTTGGT 59.360 50.000 0.00 0.00 34.12 3.67
1104 1295 1.462627 ACGGGAGAGGGGGAAACAA 60.463 57.895 0.00 0.00 0.00 2.83
1106 1300 2.987962 GACGGGAGAGGGGGAAAC 59.012 66.667 0.00 0.00 0.00 2.78
1162 1361 2.030262 CCCAGCTAGCTGATCCGC 59.970 66.667 40.03 0.04 46.30 5.54
1181 1382 2.202427 GCGGCCGAAATTTCCACG 60.202 61.111 33.48 14.22 0.00 4.94
1293 1497 2.357517 CCTTCGCGCAGGAACACT 60.358 61.111 20.89 0.00 35.71 3.55
1396 1604 7.484975 ACAATACAAAAATCGAACACCAAAGA 58.515 30.769 0.00 0.00 0.00 2.52
1417 1625 4.530875 GATCCCTCATCTTCACCAACAAT 58.469 43.478 0.00 0.00 0.00 2.71
1418 1626 3.619733 CGATCCCTCATCTTCACCAACAA 60.620 47.826 0.00 0.00 0.00 2.83
1419 1627 2.093500 CGATCCCTCATCTTCACCAACA 60.093 50.000 0.00 0.00 0.00 3.33
1422 1630 0.465705 GCGATCCCTCATCTTCACCA 59.534 55.000 0.00 0.00 0.00 4.17
1501 1709 1.521681 GCCATACCTCCTCGTGCAC 60.522 63.158 6.82 6.82 0.00 4.57
1525 1733 0.179062 CCGGGCCAGATTCAGAGAAG 60.179 60.000 4.39 0.00 0.00 2.85
1566 1775 5.306419 TGGCAAGATACAGCTCAGAATAGAT 59.694 40.000 0.00 0.00 0.00 1.98
1613 1822 3.070076 ATGCACATGCGTCACTAGG 57.930 52.632 0.00 0.00 45.83 3.02
1703 1929 1.079197 TGTCAGTGCGAATGCCGAT 60.079 52.632 0.00 0.00 41.78 4.18
1707 1933 2.069273 AGTTAGTGTCAGTGCGAATGC 58.931 47.619 0.00 0.00 43.20 3.56
1708 1934 2.159787 GCAGTTAGTGTCAGTGCGAATG 60.160 50.000 0.00 0.00 31.06 2.67
1713 1939 1.581934 TGTGCAGTTAGTGTCAGTGC 58.418 50.000 0.00 0.00 40.49 4.40
1774 2000 6.992063 ACTCCTATATCAGTGCAAACAAAG 57.008 37.500 0.00 0.00 0.00 2.77
1809 2035 4.214332 GCAACTACAGAAGCTATAATGGCC 59.786 45.833 0.00 0.00 0.00 5.36
1909 2135 1.338484 CCTCACTGAGTGACCCATGTG 60.338 57.143 11.93 0.00 37.67 3.21
1992 2219 6.714810 ACATATATGCGGGTAATCAACATGTT 59.285 34.615 12.79 4.92 0.00 2.71
2060 2295 0.532115 GCACCGCCATTTTTGAGGAT 59.468 50.000 0.00 0.00 0.00 3.24
2112 2347 1.407979 CTGAATCCATGCTTTGAGGCC 59.592 52.381 0.00 0.00 0.00 5.19
2117 2352 2.479730 GCAGAGCTGAATCCATGCTTTG 60.480 50.000 0.85 0.00 40.45 2.77
2157 2392 2.203195 ACAAGGCAGTTCGCAGCA 60.203 55.556 0.00 0.00 45.17 4.41
2163 2398 4.036734 TCATGTTTTCAGACAAGGCAGTTC 59.963 41.667 0.00 0.00 32.47 3.01
2232 2467 3.648009 GGATAGGAGCTTTGATGAGACG 58.352 50.000 0.00 0.00 0.00 4.18
2254 2489 1.876156 GCATACCTTGTAGCATCTGGC 59.124 52.381 0.00 0.00 45.30 4.85
2501 2739 0.108615 AACTTGATCCCGCAGTCGAG 60.109 55.000 0.00 0.00 38.10 4.04
2556 2794 7.285172 ACTTGGATCCATCGAGATAGATATCAG 59.715 40.741 17.06 6.33 35.17 2.90
2569 2807 2.555199 GGTGAAGACTTGGATCCATCG 58.445 52.381 17.06 12.49 0.00 3.84
2623 2861 4.184629 CCTGAGTGTTAACTGGAGTATGC 58.815 47.826 7.22 0.00 36.52 3.14
2665 2903 6.179040 AGACCTAGTACAGTTCTCGTATGTT 58.821 40.000 0.00 0.00 0.00 2.71
2669 2907 5.555017 ACAAGACCTAGTACAGTTCTCGTA 58.445 41.667 0.00 0.00 0.00 3.43
2699 2937 4.406943 GAATTCTGACCTTCGTGCAAATC 58.593 43.478 0.00 0.00 0.00 2.17
2727 2965 1.759445 CTCCACAATGTCCGAGATCCT 59.241 52.381 1.76 0.00 0.00 3.24
2736 2974 2.301870 TCCCTGTACACTCCACAATGTC 59.698 50.000 0.00 0.00 0.00 3.06
2755 2993 2.194326 GGCTGGCAGGGATCTTCC 59.806 66.667 17.64 2.75 35.23 3.46
2781 3019 2.744494 GCACCCTTGAGATCCTCATCAC 60.744 54.545 0.00 0.00 40.39 3.06
2855 3093 1.694696 ACCCTCAGAGTTCTGGAACAC 59.305 52.381 14.67 9.06 43.91 3.32
3050 3288 7.221838 GTCACTTGTATAGCTTTCATCTCTGAC 59.778 40.741 0.00 0.00 0.00 3.51
3425 3664 3.233507 ACATGTTTGGCCAGATGAAAGT 58.766 40.909 21.93 8.48 0.00 2.66
3430 3669 6.534793 GGTATTAAAACATGTTTGGCCAGATG 59.465 38.462 23.93 12.42 32.36 2.90
3452 3691 5.353123 GGAACGATTATGCACTTGAAAGGTA 59.647 40.000 0.00 0.00 0.00 3.08
3454 3693 4.396166 AGGAACGATTATGCACTTGAAAGG 59.604 41.667 0.00 0.00 0.00 3.11
3460 3699 5.705441 TGAAAGAAGGAACGATTATGCACTT 59.295 36.000 0.00 0.00 0.00 3.16
3472 3711 6.583806 CACATTACAGCATTGAAAGAAGGAAC 59.416 38.462 0.00 0.00 0.00 3.62
3488 3727 6.043327 TCAAACAAGAACGTCACATTACAG 57.957 37.500 0.00 0.00 0.00 2.74
3759 3998 8.762426 GGAACAGTACTCCTTTAATATAAAGCG 58.238 37.037 0.00 1.71 0.00 4.68
3779 4018 5.997746 TGATTTGTCTTGGAACTAGGAACAG 59.002 40.000 0.00 0.00 0.00 3.16
3866 4108 4.497291 AGTACCACACAAAGACCAGAAA 57.503 40.909 0.00 0.00 0.00 2.52
3906 4156 9.930693 AAGACAACTAGTATCAGGAACTAAAAG 57.069 33.333 0.00 0.00 36.02 2.27
3953 4234 5.581085 ACTGTAGATTATTTCTCGGTTGTGC 59.419 40.000 0.00 0.00 35.79 4.57
3982 4264 7.228308 GGAGTGATAATTTCTCTGCTGCTTATT 59.772 37.037 0.00 0.00 34.54 1.40
4019 4301 2.678934 TTCACCGGACGGAGGGAG 60.679 66.667 18.80 2.08 38.96 4.30
4020 4302 2.678934 CTTCACCGGACGGAGGGA 60.679 66.667 18.80 8.89 38.96 4.20
4021 4303 2.678934 TCTTCACCGGACGGAGGG 60.679 66.667 18.80 6.62 38.96 4.30
4022 4304 1.977544 ACTCTTCACCGGACGGAGG 60.978 63.158 18.80 9.15 38.96 4.30
4023 4305 1.213013 CACTCTTCACCGGACGGAG 59.787 63.158 18.80 10.03 38.96 4.63
4024 4306 0.250858 TACACTCTTCACCGGACGGA 60.251 55.000 18.80 0.00 38.96 4.69
4025 4307 0.109412 GTACACTCTTCACCGGACGG 60.109 60.000 9.46 9.56 42.03 4.79
4026 4308 0.594602 TGTACACTCTTCACCGGACG 59.405 55.000 9.46 0.00 0.00 4.79
4027 4309 2.492484 AGATGTACACTCTTCACCGGAC 59.508 50.000 9.46 0.00 0.00 4.79
4028 4310 2.803956 AGATGTACACTCTTCACCGGA 58.196 47.619 9.46 0.00 0.00 5.14
4029 4311 3.945921 TCTAGATGTACACTCTTCACCGG 59.054 47.826 0.00 0.00 0.00 5.28
4030 4312 5.562506 TTCTAGATGTACACTCTTCACCG 57.437 43.478 0.00 0.00 0.00 4.94
4031 4313 8.779354 AAATTTCTAGATGTACACTCTTCACC 57.221 34.615 0.00 0.00 0.00 4.02
4037 4319 9.871238 TGTCCTAAAATTTCTAGATGTACACTC 57.129 33.333 0.00 0.00 0.00 3.51
4053 4335 9.533831 ACTCAACTCCATAATTTGTCCTAAAAT 57.466 29.630 0.00 0.00 0.00 1.82
4054 4336 8.934023 ACTCAACTCCATAATTTGTCCTAAAA 57.066 30.769 0.00 0.00 0.00 1.52
4058 4340 8.934023 TTTTACTCAACTCCATAATTTGTCCT 57.066 30.769 0.00 0.00 0.00 3.85
4059 4341 9.010029 TCTTTTACTCAACTCCATAATTTGTCC 57.990 33.333 0.00 0.00 0.00 4.02
4062 4344 9.294030 GCATCTTTTACTCAACTCCATAATTTG 57.706 33.333 0.00 0.00 0.00 2.32
4063 4345 9.023962 TGCATCTTTTACTCAACTCCATAATTT 57.976 29.630 0.00 0.00 0.00 1.82
4064 4346 8.579850 TGCATCTTTTACTCAACTCCATAATT 57.420 30.769 0.00 0.00 0.00 1.40
4065 4347 8.757982 ATGCATCTTTTACTCAACTCCATAAT 57.242 30.769 0.00 0.00 0.00 1.28
4066 4348 8.461222 CAATGCATCTTTTACTCAACTCCATAA 58.539 33.333 0.00 0.00 0.00 1.90
4067 4349 7.067372 CCAATGCATCTTTTACTCAACTCCATA 59.933 37.037 0.00 0.00 0.00 2.74
4068 4350 6.127535 CCAATGCATCTTTTACTCAACTCCAT 60.128 38.462 0.00 0.00 0.00 3.41
4069 4351 5.183713 CCAATGCATCTTTTACTCAACTCCA 59.816 40.000 0.00 0.00 0.00 3.86
4070 4352 5.415701 TCCAATGCATCTTTTACTCAACTCC 59.584 40.000 0.00 0.00 0.00 3.85
4071 4353 6.500684 TCCAATGCATCTTTTACTCAACTC 57.499 37.500 0.00 0.00 0.00 3.01
4072 4354 6.071728 CCTTCCAATGCATCTTTTACTCAACT 60.072 38.462 0.00 0.00 0.00 3.16
4073 4355 6.095377 CCTTCCAATGCATCTTTTACTCAAC 58.905 40.000 0.00 0.00 0.00 3.18
4074 4356 5.774690 ACCTTCCAATGCATCTTTTACTCAA 59.225 36.000 0.00 0.00 0.00 3.02
4075 4357 5.183713 CACCTTCCAATGCATCTTTTACTCA 59.816 40.000 0.00 0.00 0.00 3.41
4076 4358 5.644644 CACCTTCCAATGCATCTTTTACTC 58.355 41.667 0.00 0.00 0.00 2.59
4077 4359 4.082026 GCACCTTCCAATGCATCTTTTACT 60.082 41.667 0.00 0.00 41.65 2.24
4078 4360 4.176271 GCACCTTCCAATGCATCTTTTAC 58.824 43.478 0.00 0.00 41.65 2.01
4079 4361 3.831333 TGCACCTTCCAATGCATCTTTTA 59.169 39.130 0.00 0.00 46.63 1.52
4080 4362 2.633967 TGCACCTTCCAATGCATCTTTT 59.366 40.909 0.00 0.00 46.63 2.27
4081 4363 2.250031 TGCACCTTCCAATGCATCTTT 58.750 42.857 0.00 0.00 46.63 2.52
4082 4364 1.927487 TGCACCTTCCAATGCATCTT 58.073 45.000 0.00 0.00 46.63 2.40
4083 4365 3.675995 TGCACCTTCCAATGCATCT 57.324 47.368 0.00 0.00 46.63 2.90
4087 4369 1.079612 GGCTTGCACCTTCCAATGC 60.080 57.895 0.00 0.00 42.40 3.56
4088 4370 0.037975 GTGGCTTGCACCTTCCAATG 60.038 55.000 0.00 0.00 0.00 2.82
4089 4371 1.187567 GGTGGCTTGCACCTTCCAAT 61.188 55.000 3.58 0.00 39.52 3.16
4090 4372 1.832167 GGTGGCTTGCACCTTCCAA 60.832 57.895 3.58 0.00 39.52 3.53
4091 4373 2.203480 GGTGGCTTGCACCTTCCA 60.203 61.111 3.58 0.00 39.52 3.53
4092 4374 1.598701 GATGGTGGCTTGCACCTTCC 61.599 60.000 11.31 0.00 42.92 3.46
4093 4375 0.610232 AGATGGTGGCTTGCACCTTC 60.610 55.000 14.74 14.74 43.27 3.46
4094 4376 0.610232 GAGATGGTGGCTTGCACCTT 60.610 55.000 11.31 5.61 42.92 3.50
4095 4377 1.001641 GAGATGGTGGCTTGCACCT 60.002 57.895 11.31 0.00 42.92 4.00
4096 4378 1.001641 AGAGATGGTGGCTTGCACC 60.002 57.895 3.83 3.83 42.80 5.01
4097 4379 0.035630 AGAGAGATGGTGGCTTGCAC 60.036 55.000 0.00 0.00 0.00 4.57
4098 4380 0.251354 GAGAGAGATGGTGGCTTGCA 59.749 55.000 0.00 0.00 0.00 4.08
4099 4381 0.463474 GGAGAGAGATGGTGGCTTGC 60.463 60.000 0.00 0.00 0.00 4.01
4100 4382 1.138661 GAGGAGAGAGATGGTGGCTTG 59.861 57.143 0.00 0.00 0.00 4.01
4101 4383 1.008206 AGAGGAGAGAGATGGTGGCTT 59.992 52.381 0.00 0.00 0.00 4.35
4102 4384 0.636101 AGAGGAGAGAGATGGTGGCT 59.364 55.000 0.00 0.00 0.00 4.75
4103 4385 1.494960 AAGAGGAGAGAGATGGTGGC 58.505 55.000 0.00 0.00 0.00 5.01
4104 4386 5.885449 ATTAAAGAGGAGAGAGATGGTGG 57.115 43.478 0.00 0.00 0.00 4.61
4105 4387 7.213678 GGTAATTAAAGAGGAGAGAGATGGTG 58.786 42.308 0.00 0.00 0.00 4.17
4106 4388 6.327887 GGGTAATTAAAGAGGAGAGAGATGGT 59.672 42.308 0.00 0.00 0.00 3.55
4107 4389 6.327626 TGGGTAATTAAAGAGGAGAGAGATGG 59.672 42.308 0.00 0.00 0.00 3.51
4108 4390 7.366847 TGGGTAATTAAAGAGGAGAGAGATG 57.633 40.000 0.00 0.00 0.00 2.90
4109 4391 7.147461 GGTTGGGTAATTAAAGAGGAGAGAGAT 60.147 40.741 0.00 0.00 0.00 2.75
4110 4392 6.156429 GGTTGGGTAATTAAAGAGGAGAGAGA 59.844 42.308 0.00 0.00 0.00 3.10
4111 4393 6.350103 GGTTGGGTAATTAAAGAGGAGAGAG 58.650 44.000 0.00 0.00 0.00 3.20
4112 4394 5.191124 GGGTTGGGTAATTAAAGAGGAGAGA 59.809 44.000 0.00 0.00 0.00 3.10
4113 4395 5.437946 GGGTTGGGTAATTAAAGAGGAGAG 58.562 45.833 0.00 0.00 0.00 3.20
4114 4396 4.228895 GGGGTTGGGTAATTAAAGAGGAGA 59.771 45.833 0.00 0.00 0.00 3.71
4115 4397 4.533815 GGGGTTGGGTAATTAAAGAGGAG 58.466 47.826 0.00 0.00 0.00 3.69
4116 4398 3.270169 GGGGGTTGGGTAATTAAAGAGGA 59.730 47.826 0.00 0.00 0.00 3.71
4117 4399 3.011934 TGGGGGTTGGGTAATTAAAGAGG 59.988 47.826 0.00 0.00 0.00 3.69
4118 4400 4.325084 TGGGGGTTGGGTAATTAAAGAG 57.675 45.455 0.00 0.00 0.00 2.85
4119 4401 4.761591 TTGGGGGTTGGGTAATTAAAGA 57.238 40.909 0.00 0.00 0.00 2.52
4120 4402 5.026790 TCATTGGGGGTTGGGTAATTAAAG 58.973 41.667 0.00 0.00 0.00 1.85
4121 4403 5.024803 TCATTGGGGGTTGGGTAATTAAA 57.975 39.130 0.00 0.00 0.00 1.52
4122 4404 4.615513 CTCATTGGGGGTTGGGTAATTAA 58.384 43.478 0.00 0.00 0.00 1.40
4123 4405 3.628769 GCTCATTGGGGGTTGGGTAATTA 60.629 47.826 0.00 0.00 0.00 1.40
4124 4406 2.892301 GCTCATTGGGGGTTGGGTAATT 60.892 50.000 0.00 0.00 0.00 1.40
4125 4407 1.342975 GCTCATTGGGGGTTGGGTAAT 60.343 52.381 0.00 0.00 0.00 1.89
4126 4408 0.040499 GCTCATTGGGGGTTGGGTAA 59.960 55.000 0.00 0.00 0.00 2.85
4127 4409 0.849094 AGCTCATTGGGGGTTGGGTA 60.849 55.000 0.00 0.00 0.00 3.69
4128 4410 0.849094 TAGCTCATTGGGGGTTGGGT 60.849 55.000 0.00 0.00 0.00 4.51
4129 4411 0.334676 TTAGCTCATTGGGGGTTGGG 59.665 55.000 0.00 0.00 0.00 4.12
4130 4412 1.005924 ACTTAGCTCATTGGGGGTTGG 59.994 52.381 0.00 0.00 0.00 3.77
4131 4413 2.094675 CACTTAGCTCATTGGGGGTTG 58.905 52.381 0.00 0.00 0.00 3.77
4132 4414 1.616994 GCACTTAGCTCATTGGGGGTT 60.617 52.381 0.00 0.00 41.15 4.11
4133 4415 0.034089 GCACTTAGCTCATTGGGGGT 60.034 55.000 0.00 0.00 41.15 4.95
4134 4416 0.034186 TGCACTTAGCTCATTGGGGG 60.034 55.000 0.00 0.00 45.94 5.40
4135 4417 1.679680 CATGCACTTAGCTCATTGGGG 59.320 52.381 0.00 0.00 45.94 4.96
4136 4418 2.372264 ACATGCACTTAGCTCATTGGG 58.628 47.619 0.00 0.00 45.94 4.12
4137 4419 6.866010 TTATACATGCACTTAGCTCATTGG 57.134 37.500 0.00 0.00 45.94 3.16
4141 4423 9.830975 TCTTAATTTATACATGCACTTAGCTCA 57.169 29.630 0.00 0.00 45.94 4.26
4147 4429 9.461312 TGGTCTTCTTAATTTATACATGCACTT 57.539 29.630 0.00 0.00 0.00 3.16
4148 4430 9.632638 ATGGTCTTCTTAATTTATACATGCACT 57.367 29.630 0.00 0.00 0.00 4.40
4149 4431 9.669353 CATGGTCTTCTTAATTTATACATGCAC 57.331 33.333 0.00 0.00 0.00 4.57
4150 4432 9.407380 ACATGGTCTTCTTAATTTATACATGCA 57.593 29.630 0.00 0.00 36.40 3.96
4151 4433 9.669353 CACATGGTCTTCTTAATTTATACATGC 57.331 33.333 0.00 0.00 36.40 4.06
4159 4441 8.462016 GCAATCTACACATGGTCTTCTTAATTT 58.538 33.333 0.00 0.00 0.00 1.82
4160 4442 7.831193 AGCAATCTACACATGGTCTTCTTAATT 59.169 33.333 0.00 0.00 0.00 1.40
4161 4443 7.341805 AGCAATCTACACATGGTCTTCTTAAT 58.658 34.615 0.00 0.00 0.00 1.40
4162 4444 6.711277 AGCAATCTACACATGGTCTTCTTAA 58.289 36.000 0.00 0.00 0.00 1.85
4163 4445 6.299805 AGCAATCTACACATGGTCTTCTTA 57.700 37.500 0.00 0.00 0.00 2.10
4164 4446 5.171339 AGCAATCTACACATGGTCTTCTT 57.829 39.130 0.00 0.00 0.00 2.52
4165 4447 4.833478 AGCAATCTACACATGGTCTTCT 57.167 40.909 0.00 0.00 0.00 2.85
4166 4448 6.017605 CCAATAGCAATCTACACATGGTCTTC 60.018 42.308 0.00 0.00 0.00 2.87
4167 4449 5.824624 CCAATAGCAATCTACACATGGTCTT 59.175 40.000 0.00 0.00 0.00 3.01
4168 4450 5.104360 ACCAATAGCAATCTACACATGGTCT 60.104 40.000 0.00 0.00 31.09 3.85
4169 4451 5.126067 ACCAATAGCAATCTACACATGGTC 58.874 41.667 0.00 0.00 31.09 4.02
4170 4452 5.104360 AGACCAATAGCAATCTACACATGGT 60.104 40.000 0.00 0.00 35.42 3.55
4171 4453 5.371526 AGACCAATAGCAATCTACACATGG 58.628 41.667 0.00 0.00 0.00 3.66
4172 4454 6.539826 TCAAGACCAATAGCAATCTACACATG 59.460 38.462 0.00 0.00 0.00 3.21
4173 4455 6.653020 TCAAGACCAATAGCAATCTACACAT 58.347 36.000 0.00 0.00 0.00 3.21
4174 4456 6.048732 TCAAGACCAATAGCAATCTACACA 57.951 37.500 0.00 0.00 0.00 3.72
4175 4457 7.559590 AATCAAGACCAATAGCAATCTACAC 57.440 36.000 0.00 0.00 0.00 2.90
4176 4458 7.715249 GGTAATCAAGACCAATAGCAATCTACA 59.285 37.037 0.00 0.00 36.91 2.74
4177 4459 7.095607 CGGTAATCAAGACCAATAGCAATCTAC 60.096 40.741 0.00 0.00 36.72 2.59
4178 4460 6.929049 CGGTAATCAAGACCAATAGCAATCTA 59.071 38.462 0.00 0.00 36.72 1.98
4179 4461 5.760253 CGGTAATCAAGACCAATAGCAATCT 59.240 40.000 0.00 0.00 36.72 2.40
4180 4462 5.527582 ACGGTAATCAAGACCAATAGCAATC 59.472 40.000 0.00 0.00 36.72 2.67
4181 4463 5.296780 CACGGTAATCAAGACCAATAGCAAT 59.703 40.000 0.00 0.00 36.72 3.56
4182 4464 4.634004 CACGGTAATCAAGACCAATAGCAA 59.366 41.667 0.00 0.00 36.72 3.91
4183 4465 4.188462 CACGGTAATCAAGACCAATAGCA 58.812 43.478 0.00 0.00 36.72 3.49
4184 4466 4.034048 CACACGGTAATCAAGACCAATAGC 59.966 45.833 0.00 0.00 36.72 2.97
4185 4467 5.416083 TCACACGGTAATCAAGACCAATAG 58.584 41.667 0.00 0.00 36.72 1.73
4186 4468 5.408880 TCACACGGTAATCAAGACCAATA 57.591 39.130 0.00 0.00 36.72 1.90
4187 4469 4.280436 TCACACGGTAATCAAGACCAAT 57.720 40.909 0.00 0.00 36.72 3.16
4188 4470 3.755112 TCACACGGTAATCAAGACCAA 57.245 42.857 0.00 0.00 36.72 3.67
4189 4471 3.259625 TCATCACACGGTAATCAAGACCA 59.740 43.478 0.00 0.00 36.72 4.02
4190 4472 3.857052 TCATCACACGGTAATCAAGACC 58.143 45.455 0.00 0.00 0.00 3.85
4191 4473 4.744570 TCTCATCACACGGTAATCAAGAC 58.255 43.478 0.00 0.00 0.00 3.01
4192 4474 4.705023 TCTCTCATCACACGGTAATCAAGA 59.295 41.667 0.00 0.00 0.00 3.02
4193 4475 4.998788 TCTCTCATCACACGGTAATCAAG 58.001 43.478 0.00 0.00 0.00 3.02
4194 4476 4.705023 TCTCTCTCATCACACGGTAATCAA 59.295 41.667 0.00 0.00 0.00 2.57
4195 4477 4.270008 TCTCTCTCATCACACGGTAATCA 58.730 43.478 0.00 0.00 0.00 2.57
4196 4478 4.902443 TCTCTCTCATCACACGGTAATC 57.098 45.455 0.00 0.00 0.00 1.75
4197 4479 4.707448 ACTTCTCTCTCATCACACGGTAAT 59.293 41.667 0.00 0.00 0.00 1.89
4198 4480 4.079970 ACTTCTCTCTCATCACACGGTAA 58.920 43.478 0.00 0.00 0.00 2.85
4199 4481 3.687125 ACTTCTCTCTCATCACACGGTA 58.313 45.455 0.00 0.00 0.00 4.02
4200 4482 2.520069 ACTTCTCTCTCATCACACGGT 58.480 47.619 0.00 0.00 0.00 4.83
4201 4483 4.909696 ATACTTCTCTCTCATCACACGG 57.090 45.455 0.00 0.00 0.00 4.94
4202 4484 6.254589 GGAAAATACTTCTCTCTCATCACACG 59.745 42.308 0.00 0.00 0.00 4.49
4203 4485 7.327214 AGGAAAATACTTCTCTCTCATCACAC 58.673 38.462 0.00 0.00 0.00 3.82
4204 4486 7.487822 AGGAAAATACTTCTCTCTCATCACA 57.512 36.000 0.00 0.00 0.00 3.58
4205 4487 8.691797 AGTAGGAAAATACTTCTCTCTCATCAC 58.308 37.037 0.00 0.00 31.89 3.06
4206 4488 8.830915 AGTAGGAAAATACTTCTCTCTCATCA 57.169 34.615 0.00 0.00 31.89 3.07
4224 4506 9.589461 TGTTCCCAATGTAATTTAAAGTAGGAA 57.411 29.630 8.45 8.45 31.22 3.36
4225 4507 9.762381 ATGTTCCCAATGTAATTTAAAGTAGGA 57.238 29.630 0.00 0.00 31.22 2.94
4229 4511 8.100164 CCCAATGTTCCCAATGTAATTTAAAGT 58.900 33.333 0.00 0.00 31.22 2.66
4230 4512 8.317679 TCCCAATGTTCCCAATGTAATTTAAAG 58.682 33.333 0.00 0.00 31.22 1.85
4231 4513 8.207350 TCCCAATGTTCCCAATGTAATTTAAA 57.793 30.769 0.00 0.00 31.22 1.52
4232 4514 7.798710 TCCCAATGTTCCCAATGTAATTTAA 57.201 32.000 0.00 0.00 31.22 1.52
4233 4515 7.676043 TCTTCCCAATGTTCCCAATGTAATTTA 59.324 33.333 0.00 0.00 31.22 1.40
4234 4516 6.500049 TCTTCCCAATGTTCCCAATGTAATTT 59.500 34.615 0.00 0.00 31.22 1.82
4235 4517 6.022315 TCTTCCCAATGTTCCCAATGTAATT 58.978 36.000 0.00 0.00 36.63 1.40
4236 4518 5.588845 TCTTCCCAATGTTCCCAATGTAAT 58.411 37.500 0.00 0.00 0.00 1.89
4237 4519 5.004361 TCTTCCCAATGTTCCCAATGTAA 57.996 39.130 0.00 0.00 0.00 2.41
4238 4520 4.666412 TCTTCCCAATGTTCCCAATGTA 57.334 40.909 0.00 0.00 0.00 2.29
4239 4521 3.541242 TCTTCCCAATGTTCCCAATGT 57.459 42.857 0.00 0.00 0.00 2.71
4240 4522 5.448654 TCTATCTTCCCAATGTTCCCAATG 58.551 41.667 0.00 0.00 0.00 2.82
4241 4523 5.732331 TCTATCTTCCCAATGTTCCCAAT 57.268 39.130 0.00 0.00 0.00 3.16
4242 4524 5.015178 ACTTCTATCTTCCCAATGTTCCCAA 59.985 40.000 0.00 0.00 0.00 4.12
4243 4525 4.540099 ACTTCTATCTTCCCAATGTTCCCA 59.460 41.667 0.00 0.00 0.00 4.37
4244 4526 5.117406 ACTTCTATCTTCCCAATGTTCCC 57.883 43.478 0.00 0.00 0.00 3.97
4245 4527 6.539103 GTGTACTTCTATCTTCCCAATGTTCC 59.461 42.308 0.00 0.00 0.00 3.62
4246 4528 7.331791 AGTGTACTTCTATCTTCCCAATGTTC 58.668 38.462 0.00 0.00 0.00 3.18
4247 4529 7.259088 AGTGTACTTCTATCTTCCCAATGTT 57.741 36.000 0.00 0.00 0.00 2.71
4248 4530 6.875972 AGTGTACTTCTATCTTCCCAATGT 57.124 37.500 0.00 0.00 0.00 2.71
4249 4531 8.567285 AAAAGTGTACTTCTATCTTCCCAATG 57.433 34.615 0.00 0.00 34.61 2.82
4275 4557 6.707440 TCTAGCTTCAAAATTTGTCCACAA 57.293 33.333 5.56 0.00 0.00 3.33
4276 4558 6.265196 ACATCTAGCTTCAAAATTTGTCCACA 59.735 34.615 5.56 0.00 0.00 4.17
4277 4559 6.681777 ACATCTAGCTTCAAAATTTGTCCAC 58.318 36.000 5.56 0.00 0.00 4.02
4278 4560 6.899393 ACATCTAGCTTCAAAATTTGTCCA 57.101 33.333 5.56 0.00 0.00 4.02
4279 4561 7.750903 GTGTACATCTAGCTTCAAAATTTGTCC 59.249 37.037 5.56 0.00 0.00 4.02
4280 4562 8.507249 AGTGTACATCTAGCTTCAAAATTTGTC 58.493 33.333 5.56 0.00 0.00 3.18
4281 4563 8.396272 AGTGTACATCTAGCTTCAAAATTTGT 57.604 30.769 5.56 0.00 0.00 2.83
4282 4564 8.725148 AGAGTGTACATCTAGCTTCAAAATTTG 58.275 33.333 0.00 0.00 0.00 2.32
4283 4565 8.854614 AGAGTGTACATCTAGCTTCAAAATTT 57.145 30.769 0.00 0.00 0.00 1.82
4284 4566 8.854614 AAGAGTGTACATCTAGCTTCAAAATT 57.145 30.769 0.00 0.00 0.00 1.82
4285 4567 8.097038 TGAAGAGTGTACATCTAGCTTCAAAAT 58.903 33.333 18.14 0.50 37.79 1.82
4286 4568 7.385205 GTGAAGAGTGTACATCTAGCTTCAAAA 59.615 37.037 20.27 5.92 41.02 2.44
4287 4569 6.868864 GTGAAGAGTGTACATCTAGCTTCAAA 59.131 38.462 20.27 6.38 41.02 2.69
4288 4570 6.390721 GTGAAGAGTGTACATCTAGCTTCAA 58.609 40.000 20.27 9.81 41.02 2.69
4289 4571 5.105716 GGTGAAGAGTGTACATCTAGCTTCA 60.106 44.000 17.25 17.25 38.23 3.02
4290 4572 5.344884 GGTGAAGAGTGTACATCTAGCTTC 58.655 45.833 0.00 8.64 0.00 3.86
4291 4573 4.142359 CGGTGAAGAGTGTACATCTAGCTT 60.142 45.833 0.00 0.00 0.00 3.74
4292 4574 3.378742 CGGTGAAGAGTGTACATCTAGCT 59.621 47.826 0.00 0.00 0.00 3.32
4293 4575 3.489398 CCGGTGAAGAGTGTACATCTAGC 60.489 52.174 0.00 0.00 0.00 3.42
4294 4576 3.945921 TCCGGTGAAGAGTGTACATCTAG 59.054 47.826 0.00 0.00 0.00 2.43
4295 4577 3.693085 GTCCGGTGAAGAGTGTACATCTA 59.307 47.826 0.00 0.00 0.00 1.98
4296 4578 2.492484 GTCCGGTGAAGAGTGTACATCT 59.508 50.000 0.00 0.27 0.00 2.90
4297 4579 2.731341 CGTCCGGTGAAGAGTGTACATC 60.731 54.545 0.00 0.00 0.00 3.06
4298 4580 1.201647 CGTCCGGTGAAGAGTGTACAT 59.798 52.381 0.00 0.00 0.00 2.29
4299 4581 0.594602 CGTCCGGTGAAGAGTGTACA 59.405 55.000 0.00 0.00 0.00 2.90
4300 4582 0.109412 CCGTCCGGTGAAGAGTGTAC 60.109 60.000 0.00 0.00 0.00 2.90
4301 4583 0.250858 TCCGTCCGGTGAAGAGTGTA 60.251 55.000 0.00 0.00 36.47 2.90
4302 4584 1.524863 CTCCGTCCGGTGAAGAGTGT 61.525 60.000 0.00 0.00 36.47 3.55
4303 4585 1.213013 CTCCGTCCGGTGAAGAGTG 59.787 63.158 0.00 0.00 36.47 3.51
4304 4586 1.977544 CCTCCGTCCGGTGAAGAGT 60.978 63.158 0.00 0.00 36.47 3.24
4305 4587 2.711922 CCCTCCGTCCGGTGAAGAG 61.712 68.421 0.00 3.95 36.47 2.85
4306 4588 2.678934 CCCTCCGTCCGGTGAAGA 60.679 66.667 0.00 0.00 36.47 2.87
4307 4589 2.678934 TCCCTCCGTCCGGTGAAG 60.679 66.667 0.00 0.00 36.47 3.02
4308 4590 2.141011 TACTCCCTCCGTCCGGTGAA 62.141 60.000 0.00 0.00 36.47 3.18
4309 4591 2.605607 TACTCCCTCCGTCCGGTGA 61.606 63.158 0.00 0.00 36.47 4.02
4310 4592 2.044650 TACTCCCTCCGTCCGGTG 60.045 66.667 0.00 3.10 36.47 4.94
4311 4593 2.044551 GTACTCCCTCCGTCCGGT 60.045 66.667 0.00 0.00 36.47 5.28
4312 4594 2.832201 GGTACTCCCTCCGTCCGG 60.832 72.222 0.00 0.00 0.00 5.14
4313 4595 1.379576 AAGGTACTCCCTCCGTCCG 60.380 63.158 0.00 0.00 45.47 4.79
4314 4596 1.328430 CCAAGGTACTCCCTCCGTCC 61.328 65.000 0.00 0.00 45.47 4.79
4315 4597 0.324091 TCCAAGGTACTCCCTCCGTC 60.324 60.000 0.00 0.00 45.47 4.79
4316 4598 0.115745 TTCCAAGGTACTCCCTCCGT 59.884 55.000 0.00 0.00 45.47 4.69
4317 4599 1.272807 TTTCCAAGGTACTCCCTCCG 58.727 55.000 0.00 0.00 45.47 4.63
4318 4600 2.026169 CCTTTTCCAAGGTACTCCCTCC 60.026 54.545 0.00 0.00 45.47 4.30
4319 4601 3.351794 CCTTTTCCAAGGTACTCCCTC 57.648 52.381 0.00 0.00 45.47 4.30
4443 4742 5.418310 TCAAAACCTTCAGAATTCGTCAC 57.582 39.130 0.00 0.00 0.00 3.67
4499 4798 3.876914 GTGTTCCGAATGATAGAATGGCA 59.123 43.478 0.00 0.00 0.00 4.92



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.