Multiple sequence alignment - TraesCS5A01G410600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G410600 chr5A 100.000 3308 0 0 1 3308 599642224 599645531 0.000000e+00 6109.0
1 TraesCS5A01G410600 chr5A 91.821 648 51 2 60 707 606623824 606624469 0.000000e+00 902.0
2 TraesCS5A01G410600 chr5A 88.826 707 77 2 1 707 601466500 601465796 0.000000e+00 867.0
3 TraesCS5A01G410600 chr5A 89.418 189 17 1 1591 1776 592293434 592293246 5.520000e-58 235.0
4 TraesCS5A01G410600 chr5A 89.005 191 19 2 1585 1773 596040915 596041105 5.520000e-58 235.0
5 TraesCS5A01G410600 chr5A 84.049 163 11 7 2372 2523 415232220 415232378 3.440000e-30 143.0
6 TraesCS5A01G410600 chr5B 94.778 1015 40 3 1773 2775 588914564 588915577 0.000000e+00 1568.0
7 TraesCS5A01G410600 chr5B 86.885 915 59 16 703 1591 588920878 588921757 0.000000e+00 968.0
8 TraesCS5A01G410600 chr5B 86.674 863 61 16 758 1591 588913735 588914572 0.000000e+00 907.0
9 TraesCS5A01G410600 chr5B 83.580 609 70 22 1773 2371 588921749 588922337 8.070000e-151 544.0
10 TraesCS5A01G410600 chr5B 83.212 274 31 9 1773 2031 588883064 588883337 1.530000e-58 237.0
11 TraesCS5A01G410600 chr5B 89.305 187 17 3 1591 1776 463194771 463194587 7.140000e-57 231.0
12 TraesCS5A01G410600 chr5B 89.674 184 12 4 1591 1773 177199855 177200032 9.230000e-56 228.0
13 TraesCS5A01G410600 chr5B 83.243 185 24 6 752 934 588882270 588882449 2.640000e-36 163.0
14 TraesCS5A01G410600 chr5B 80.095 211 19 4 1591 1779 450611538 450611329 5.760000e-28 135.0
15 TraesCS5A01G410600 chr5B 87.069 116 15 0 2829 2944 666185364 666185249 7.450000e-27 132.0
16 TraesCS5A01G410600 chr7D 92.102 709 52 4 1 707 108404268 108403562 0.000000e+00 996.0
17 TraesCS5A01G410600 chr7D 92.982 228 16 0 3051 3278 45198737 45198510 1.900000e-87 333.0
18 TraesCS5A01G410600 chr7D 92.576 229 17 0 3051 3279 22929914 22930142 2.460000e-86 329.0
19 TraesCS5A01G410600 chr7D 89.412 85 8 1 2863 2946 619680561 619680645 4.510000e-19 106.0
20 TraesCS5A01G410600 chr1D 92.068 706 52 4 1 706 236504707 236504006 0.000000e+00 990.0
21 TraesCS5A01G410600 chr1D 92.576 229 17 0 3052 3280 30371065 30370837 2.460000e-86 329.0
22 TraesCS5A01G410600 chr2D 90.935 706 51 8 3 707 174577868 174577175 0.000000e+00 937.0
23 TraesCS5A01G410600 chr2D 86.275 153 15 6 2389 2540 606633107 606633254 9.500000e-36 161.0
24 TraesCS5A01G410600 chr6A 89.816 707 68 4 1 706 212379684 212380387 0.000000e+00 904.0
25 TraesCS5A01G410600 chr6A 81.818 88 15 1 2863 2949 604383835 604383748 4.580000e-09 73.1
26 TraesCS5A01G410600 chr4D 89.773 704 62 5 2 705 157969464 157968771 0.000000e+00 893.0
27 TraesCS5A01G410600 chr4D 89.347 704 65 5 2 704 477545410 477544716 0.000000e+00 876.0
28 TraesCS5A01G410600 chr4D 93.043 230 15 1 3051 3280 462738198 462738426 5.290000e-88 335.0
29 TraesCS5A01G410600 chr4D 92.641 231 16 1 3051 3280 462736693 462736923 6.840000e-87 331.0
30 TraesCS5A01G410600 chr4D 100.000 30 0 0 3279 3308 182510534 182510505 4.610000e-04 56.5
31 TraesCS5A01G410600 chr3A 88.343 712 65 13 2 707 699834483 699835182 0.000000e+00 839.0
32 TraesCS5A01G410600 chrUn 87.836 707 75 5 2 707 293069518 293068822 0.000000e+00 819.0
33 TraesCS5A01G410600 chrUn 100.000 29 0 0 3280 3308 286305141 286305169 2.000000e-03 54.7
34 TraesCS5A01G410600 chr3B 87.836 707 75 5 2 707 6642421 6643117 0.000000e+00 819.0
35 TraesCS5A01G410600 chr3B 92.045 88 6 1 2863 2949 749020776 749020689 4.480000e-24 122.0
36 TraesCS5A01G410600 chr3B 87.640 89 11 0 2967 3055 75999568 75999656 1.620000e-18 104.0
37 TraesCS5A01G410600 chr3B 93.478 46 3 0 1400 1445 800958954 800958909 5.920000e-08 69.4
38 TraesCS5A01G410600 chr3B 92.105 38 2 1 3271 3308 300782177 300782141 6.000000e-03 52.8
39 TraesCS5A01G410600 chr3B 100.000 28 0 0 3281 3308 381748547 381748520 6.000000e-03 52.8
40 TraesCS5A01G410600 chr5D 84.389 884 79 27 738 1591 480555349 480556203 0.000000e+00 813.0
41 TraesCS5A01G410600 chr5D 84.349 607 70 15 1773 2371 480556195 480556784 3.700000e-159 571.0
42 TraesCS5A01G410600 chr5D 86.804 485 52 11 1773 2252 480500597 480501074 6.290000e-147 531.0
43 TraesCS5A01G410600 chr5D 78.621 856 116 24 752 1591 480499801 480500605 3.810000e-139 505.0
44 TraesCS5A01G410600 chr5D 93.913 230 14 0 3051 3280 398417159 398417388 6.790000e-92 348.0
45 TraesCS5A01G410600 chr6B 85.614 709 88 7 2 709 257592260 257592955 0.000000e+00 732.0
46 TraesCS5A01G410600 chr6B 87.603 121 15 0 2829 2949 48478749 48478629 1.240000e-29 141.0
47 TraesCS5A01G410600 chr4A 93.450 229 15 0 3051 3279 741803385 741803613 1.140000e-89 340.0
48 TraesCS5A01G410600 chr4A 89.175 194 17 3 1589 1781 104614449 104614259 4.270000e-59 239.0
49 TraesCS5A01G410600 chr4A 94.118 34 2 0 3275 3308 288751216 288751249 6.000000e-03 52.8
50 TraesCS5A01G410600 chr4B 92.982 228 16 0 3051 3278 664481632 664481405 1.900000e-87 333.0
51 TraesCS5A01G410600 chr2B 92.609 230 17 0 3051 3280 82867368 82867597 6.840000e-87 331.0
52 TraesCS5A01G410600 chr2B 91.304 184 15 1 1591 1773 577253833 577254016 1.970000e-62 250.0
53 TraesCS5A01G410600 chr2A 91.979 187 14 1 1591 1776 68865581 68865395 9.110000e-66 261.0
54 TraesCS5A01G410600 chr2A 84.211 57 9 0 2094 2150 143373330 143373386 4.610000e-04 56.5
55 TraesCS5A01G410600 chr2A 94.286 35 1 1 3275 3308 128064049 128064083 6.000000e-03 52.8
56 TraesCS5A01G410600 chr1A 89.362 188 18 2 1591 1776 580149200 580149013 5.520000e-58 235.0
57 TraesCS5A01G410600 chr1A 80.165 121 9 4 2776 2882 568334853 568334972 3.540000e-10 76.8
58 TraesCS5A01G410600 chr1A 100.000 30 0 0 3279 3308 63380377 63380406 4.610000e-04 56.5
59 TraesCS5A01G410600 chr1A 100.000 30 0 0 3279 3308 258941528 258941557 4.610000e-04 56.5
60 TraesCS5A01G410600 chr7B 88.830 188 18 3 1591 1776 571256192 571256006 9.230000e-56 228.0
61 TraesCS5A01G410600 chr1B 92.424 66 5 0 1712 1777 644342984 644342919 9.770000e-16 95.3
62 TraesCS5A01G410600 chr1B 92.424 66 5 0 1712 1777 644525323 644525388 9.770000e-16 95.3
63 TraesCS5A01G410600 chr1B 97.143 35 0 1 3274 3308 517510861 517510894 1.280000e-04 58.4
64 TraesCS5A01G410600 chr6D 85.227 88 9 2 2793 2876 31117455 31117542 1.640000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G410600 chr5A 599642224 599645531 3307 False 6109.0 6109 100.0000 1 3308 1 chr5A.!!$F3 3307
1 TraesCS5A01G410600 chr5A 606623824 606624469 645 False 902.0 902 91.8210 60 707 1 chr5A.!!$F4 647
2 TraesCS5A01G410600 chr5A 601465796 601466500 704 True 867.0 867 88.8260 1 707 1 chr5A.!!$R2 706
3 TraesCS5A01G410600 chr5B 588913735 588915577 1842 False 1237.5 1568 90.7260 758 2775 2 chr5B.!!$F3 2017
4 TraesCS5A01G410600 chr5B 588920878 588922337 1459 False 756.0 968 85.2325 703 2371 2 chr5B.!!$F4 1668
5 TraesCS5A01G410600 chr7D 108403562 108404268 706 True 996.0 996 92.1020 1 707 1 chr7D.!!$R2 706
6 TraesCS5A01G410600 chr1D 236504006 236504707 701 True 990.0 990 92.0680 1 706 1 chr1D.!!$R2 705
7 TraesCS5A01G410600 chr2D 174577175 174577868 693 True 937.0 937 90.9350 3 707 1 chr2D.!!$R1 704
8 TraesCS5A01G410600 chr6A 212379684 212380387 703 False 904.0 904 89.8160 1 706 1 chr6A.!!$F1 705
9 TraesCS5A01G410600 chr4D 157968771 157969464 693 True 893.0 893 89.7730 2 705 1 chr4D.!!$R1 703
10 TraesCS5A01G410600 chr4D 477544716 477545410 694 True 876.0 876 89.3470 2 704 1 chr4D.!!$R3 702
11 TraesCS5A01G410600 chr4D 462736693 462738426 1733 False 333.0 335 92.8420 3051 3280 2 chr4D.!!$F1 229
12 TraesCS5A01G410600 chr3A 699834483 699835182 699 False 839.0 839 88.3430 2 707 1 chr3A.!!$F1 705
13 TraesCS5A01G410600 chrUn 293068822 293069518 696 True 819.0 819 87.8360 2 707 1 chrUn.!!$R1 705
14 TraesCS5A01G410600 chr3B 6642421 6643117 696 False 819.0 819 87.8360 2 707 1 chr3B.!!$F1 705
15 TraesCS5A01G410600 chr5D 480555349 480556784 1435 False 692.0 813 84.3690 738 2371 2 chr5D.!!$F3 1633
16 TraesCS5A01G410600 chr5D 480499801 480501074 1273 False 518.0 531 82.7125 752 2252 2 chr5D.!!$F2 1500
17 TraesCS5A01G410600 chr6B 257592260 257592955 695 False 732.0 732 85.6140 2 709 1 chr6B.!!$F1 707

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 766 0.039165 CCCTTTTTGACTCGGCAAGC 60.039 55.0 0.0 0.0 0.00 4.01 F
1586 1653 0.110486 ATGACGGGTTCAAGGTGCTT 59.890 50.0 0.0 0.0 37.92 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1616 1683 0.511221 GTCAGCGTGTAATTGCGTGT 59.489 50.0 0.00 0.0 35.87 4.49 R
2910 2999 0.031585 TGCCGACGGTGTATCTATGC 59.968 55.0 16.73 0.0 0.00 3.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.450904 TGGTGCAGTTCTAGGGTAGAAT 58.549 45.455 0.00 0.00 45.63 2.40
89 90 1.447663 GCGCCGGGCAAAATCAAAT 60.448 52.632 20.71 0.00 42.87 2.32
161 163 4.966787 GGCGGGGCTGGACAAACA 62.967 66.667 0.00 0.00 0.00 2.83
172 174 3.877508 GCTGGACAAACACTTACTTCTGT 59.122 43.478 0.00 0.00 0.00 3.41
340 342 1.452651 CGTGCAAGGCATCCTGGAT 60.453 57.895 2.57 2.57 41.91 3.41
341 343 0.179048 CGTGCAAGGCATCCTGGATA 60.179 55.000 9.27 0.00 41.91 2.59
345 347 2.158711 TGCAAGGCATCCTGGATAAGAG 60.159 50.000 9.27 0.00 32.13 2.85
359 361 1.847798 TAAGAGCCCGCACCAATGGT 61.848 55.000 0.00 0.00 35.62 3.55
396 403 1.678598 TTGTGCTGGCTTGCTTGCTT 61.679 50.000 10.29 0.00 0.00 3.91
451 458 1.735198 GTAGCAACTGCCGTGCGTA 60.735 57.895 0.00 0.00 43.38 4.42
454 461 3.419759 CAACTGCCGTGCGTACCC 61.420 66.667 0.00 0.00 0.00 3.69
746 766 0.039165 CCCTTTTTGACTCGGCAAGC 60.039 55.000 0.00 0.00 0.00 4.01
784 804 4.117661 GAGAAGGCGGCGAGACGT 62.118 66.667 12.98 0.00 35.98 4.34
802 822 0.603975 GTCCAAGCAAGAAGGCTCGT 60.604 55.000 0.00 0.00 45.07 4.18
804 824 1.079503 CCAAGCAAGAAGGCTCGTAC 58.920 55.000 0.00 0.00 45.07 3.67
1096 1135 0.883833 GTGGTGCCACAAAGATCTGG 59.116 55.000 15.81 0.00 45.53 3.86
1148 1187 2.968206 GTCCTACAAGGCGGACGT 59.032 61.111 0.00 0.00 40.18 4.34
1169 1208 2.591311 GCGCCGTCGACTTTGTGAA 61.591 57.895 14.70 0.00 38.10 3.18
1272 1326 6.822676 TGTGGCTTTCAATTTCAAGTTTCAAT 59.177 30.769 0.00 0.00 0.00 2.57
1273 1327 7.127686 GTGGCTTTCAATTTCAAGTTTCAATG 58.872 34.615 0.00 0.00 0.00 2.82
1280 1334 6.869913 TCAATTTCAAGTTTCAATGCTGATCC 59.130 34.615 0.00 0.00 0.00 3.36
1336 1397 1.203364 AGGAGATCAACAGGTGGGTCT 60.203 52.381 0.00 0.00 0.00 3.85
1338 1399 2.183679 GAGATCAACAGGTGGGTCTCT 58.816 52.381 9.40 0.00 36.89 3.10
1363 1430 1.338105 CCACGAAGAAGCTCATCACCA 60.338 52.381 0.00 0.00 0.00 4.17
1364 1431 2.416747 CACGAAGAAGCTCATCACCAA 58.583 47.619 0.00 0.00 0.00 3.67
1369 1436 1.620819 AGAAGCTCATCACCAACGTCT 59.379 47.619 0.00 0.00 0.00 4.18
1467 1534 1.962822 CTTCAGCAAGAGCCGCACA 60.963 57.895 0.00 0.00 43.56 4.57
1488 1555 3.343421 GACCACACGTTCCACCGC 61.343 66.667 0.00 0.00 0.00 5.68
1514 1581 2.356313 CTCGACAGCAGCACCGTT 60.356 61.111 0.00 0.00 0.00 4.44
1545 1612 1.375523 ATGGACGGAAACAGACGCC 60.376 57.895 0.00 0.00 0.00 5.68
1586 1653 0.110486 ATGACGGGTTCAAGGTGCTT 59.890 50.000 0.00 0.00 37.92 3.91
1587 1654 0.759959 TGACGGGTTCAAGGTGCTTA 59.240 50.000 0.00 0.00 0.00 3.09
1588 1655 1.141254 TGACGGGTTCAAGGTGCTTAA 59.859 47.619 0.00 0.00 0.00 1.85
1589 1656 1.804748 GACGGGTTCAAGGTGCTTAAG 59.195 52.381 0.00 0.00 0.00 1.85
1590 1657 0.521735 CGGGTTCAAGGTGCTTAAGC 59.478 55.000 20.84 20.84 42.50 3.09
1620 1687 8.722342 ATGCTAAACATACAAAAAGTTACACG 57.278 30.769 0.00 0.00 37.17 4.49
1621 1688 6.633634 TGCTAAACATACAAAAAGTTACACGC 59.366 34.615 0.00 0.00 0.00 5.34
1622 1689 6.633634 GCTAAACATACAAAAAGTTACACGCA 59.366 34.615 0.00 0.00 0.00 5.24
1623 1690 7.166142 GCTAAACATACAAAAAGTTACACGCAA 59.834 33.333 0.00 0.00 0.00 4.85
1624 1691 7.995463 AAACATACAAAAAGTTACACGCAAT 57.005 28.000 0.00 0.00 0.00 3.56
1625 1692 7.995463 AACATACAAAAAGTTACACGCAATT 57.005 28.000 0.00 0.00 0.00 2.32
1626 1693 9.517609 AAACATACAAAAAGTTACACGCAATTA 57.482 25.926 0.00 0.00 0.00 1.40
1627 1694 8.496872 ACATACAAAAAGTTACACGCAATTAC 57.503 30.769 0.00 0.00 0.00 1.89
1628 1695 8.129840 ACATACAAAAAGTTACACGCAATTACA 58.870 29.630 0.00 0.00 0.00 2.41
1629 1696 6.799786 ACAAAAAGTTACACGCAATTACAC 57.200 33.333 0.00 0.00 0.00 2.90
1630 1697 5.452944 ACAAAAAGTTACACGCAATTACACG 59.547 36.000 0.00 0.00 0.00 4.49
1631 1698 2.867456 AGTTACACGCAATTACACGC 57.133 45.000 0.00 0.00 0.00 5.34
1632 1699 2.409975 AGTTACACGCAATTACACGCT 58.590 42.857 0.00 0.00 0.00 5.07
1633 1700 2.156891 AGTTACACGCAATTACACGCTG 59.843 45.455 0.00 0.00 0.00 5.18
1634 1701 2.067414 TACACGCAATTACACGCTGA 57.933 45.000 0.00 0.00 0.00 4.26
1635 1702 0.511221 ACACGCAATTACACGCTGAC 59.489 50.000 0.00 0.00 0.00 3.51
1636 1703 0.790207 CACGCAATTACACGCTGACT 59.210 50.000 0.00 0.00 0.00 3.41
1637 1704 1.989864 CACGCAATTACACGCTGACTA 59.010 47.619 0.00 0.00 0.00 2.59
1638 1705 2.028045 CACGCAATTACACGCTGACTAG 59.972 50.000 0.00 0.00 0.00 2.57
1639 1706 2.094906 ACGCAATTACACGCTGACTAGA 60.095 45.455 0.00 0.00 0.00 2.43
1640 1707 2.921121 CGCAATTACACGCTGACTAGAA 59.079 45.455 0.00 0.00 0.00 2.10
1641 1708 3.551890 CGCAATTACACGCTGACTAGAAT 59.448 43.478 0.00 0.00 0.00 2.40
1642 1709 4.032900 CGCAATTACACGCTGACTAGAATT 59.967 41.667 0.00 0.00 0.00 2.17
1643 1710 5.445939 CGCAATTACACGCTGACTAGAATTT 60.446 40.000 0.00 0.00 0.00 1.82
1644 1711 6.314784 GCAATTACACGCTGACTAGAATTTT 58.685 36.000 0.00 0.00 0.00 1.82
1645 1712 6.801862 GCAATTACACGCTGACTAGAATTTTT 59.198 34.615 0.00 0.00 0.00 1.94
1668 1735 8.610248 TTTTTCATCTACTAACCAATCACGAA 57.390 30.769 0.00 0.00 0.00 3.85
1669 1736 7.591006 TTTCATCTACTAACCAATCACGAAC 57.409 36.000 0.00 0.00 0.00 3.95
1670 1737 6.525578 TCATCTACTAACCAATCACGAACT 57.474 37.500 0.00 0.00 0.00 3.01
1671 1738 6.931838 TCATCTACTAACCAATCACGAACTT 58.068 36.000 0.00 0.00 0.00 2.66
1672 1739 6.811665 TCATCTACTAACCAATCACGAACTTG 59.188 38.462 0.00 0.00 0.00 3.16
1673 1740 4.927425 TCTACTAACCAATCACGAACTTGC 59.073 41.667 0.00 0.00 0.00 4.01
1674 1741 2.812011 ACTAACCAATCACGAACTTGCC 59.188 45.455 0.00 0.00 0.00 4.52
1675 1742 0.958822 AACCAATCACGAACTTGCCC 59.041 50.000 0.00 0.00 0.00 5.36
1676 1743 0.893727 ACCAATCACGAACTTGCCCC 60.894 55.000 0.00 0.00 0.00 5.80
1677 1744 1.595093 CCAATCACGAACTTGCCCCC 61.595 60.000 0.00 0.00 0.00 5.40
1694 1761 3.757947 CCCCCTAATTTTCAGGAAGGT 57.242 47.619 0.00 0.00 34.91 3.50
1695 1762 3.365472 CCCCCTAATTTTCAGGAAGGTG 58.635 50.000 0.00 0.00 34.91 4.00
1696 1763 3.365472 CCCCTAATTTTCAGGAAGGTGG 58.635 50.000 0.00 0.00 34.91 4.61
1697 1764 3.011257 CCCCTAATTTTCAGGAAGGTGGA 59.989 47.826 0.00 0.00 34.91 4.02
1698 1765 4.017126 CCCTAATTTTCAGGAAGGTGGAC 58.983 47.826 0.00 0.00 34.91 4.02
1699 1766 4.017126 CCTAATTTTCAGGAAGGTGGACC 58.983 47.826 0.00 0.00 34.91 4.46
1700 1767 2.200373 ATTTTCAGGAAGGTGGACCG 57.800 50.000 0.00 0.00 42.08 4.79
1701 1768 0.536460 TTTTCAGGAAGGTGGACCGC 60.536 55.000 0.00 0.00 42.08 5.68
1702 1769 2.406002 TTTCAGGAAGGTGGACCGCC 62.406 60.000 16.95 16.95 42.08 6.13
1704 1771 3.003763 AGGAAGGTGGACCGCCTC 61.004 66.667 26.95 18.60 44.35 4.70
1705 1772 4.097361 GGAAGGTGGACCGCCTCC 62.097 72.222 26.95 22.96 44.35 4.30
1706 1773 4.097361 GAAGGTGGACCGCCTCCC 62.097 72.222 26.95 17.33 44.35 4.30
1713 1780 3.152400 GACCGCCTCCCCACGTAT 61.152 66.667 0.00 0.00 0.00 3.06
1714 1781 2.686106 ACCGCCTCCCCACGTATT 60.686 61.111 0.00 0.00 0.00 1.89
1715 1782 2.203015 CCGCCTCCCCACGTATTG 60.203 66.667 0.00 0.00 0.00 1.90
1716 1783 2.727392 CCGCCTCCCCACGTATTGA 61.727 63.158 0.00 0.00 0.00 2.57
1717 1784 1.520787 CGCCTCCCCACGTATTGAC 60.521 63.158 0.00 0.00 0.00 3.18
1718 1785 1.153229 GCCTCCCCACGTATTGACC 60.153 63.158 0.00 0.00 0.00 4.02
1719 1786 1.906105 GCCTCCCCACGTATTGACCA 61.906 60.000 0.00 0.00 0.00 4.02
1720 1787 0.616371 CCTCCCCACGTATTGACCAA 59.384 55.000 0.00 0.00 0.00 3.67
1721 1788 1.211949 CCTCCCCACGTATTGACCAAT 59.788 52.381 0.00 0.64 34.93 3.16
1722 1789 2.561569 CTCCCCACGTATTGACCAATC 58.438 52.381 0.00 0.00 32.50 2.67
1723 1790 1.909986 TCCCCACGTATTGACCAATCA 59.090 47.619 0.00 0.00 32.50 2.57
1739 1806 9.883142 TTGACCAATCAAATTAACTCTTTTTGT 57.117 25.926 0.00 0.00 41.99 2.83
1763 1830 8.987890 TGTAAAACCTAGTAAATCGTTTGTACC 58.012 33.333 0.00 0.00 0.00 3.34
1764 1831 9.208022 GTAAAACCTAGTAAATCGTTTGTACCT 57.792 33.333 0.00 0.00 0.00 3.08
1765 1832 7.662604 AAACCTAGTAAATCGTTTGTACCTG 57.337 36.000 0.00 0.00 0.00 4.00
1766 1833 6.350629 ACCTAGTAAATCGTTTGTACCTGT 57.649 37.500 0.00 0.00 0.00 4.00
1767 1834 7.466746 ACCTAGTAAATCGTTTGTACCTGTA 57.533 36.000 0.00 0.00 0.00 2.74
1768 1835 7.542025 ACCTAGTAAATCGTTTGTACCTGTAG 58.458 38.462 0.00 0.00 0.00 2.74
1769 1836 6.474751 CCTAGTAAATCGTTTGTACCTGTAGC 59.525 42.308 0.00 0.00 0.00 3.58
1770 1837 5.786311 AGTAAATCGTTTGTACCTGTAGCA 58.214 37.500 0.00 0.00 0.00 3.49
1771 1838 6.403878 AGTAAATCGTTTGTACCTGTAGCAT 58.596 36.000 0.00 0.00 0.00 3.79
1772 1839 6.877322 AGTAAATCGTTTGTACCTGTAGCATT 59.123 34.615 0.00 0.00 0.00 3.56
1773 1840 5.545658 AATCGTTTGTACCTGTAGCATTG 57.454 39.130 0.00 0.00 0.00 2.82
1774 1841 2.739913 TCGTTTGTACCTGTAGCATTGC 59.260 45.455 0.00 0.00 0.00 3.56
1775 1842 2.742053 CGTTTGTACCTGTAGCATTGCT 59.258 45.455 16.63 16.63 43.41 3.91
1887 1960 3.823330 GACGAGATGGCGACCGGT 61.823 66.667 6.92 6.92 34.83 5.28
1963 2037 0.036306 CCGGCTACCCAAGTTCAAGT 59.964 55.000 0.00 0.00 0.00 3.16
1995 2069 3.909776 TGCAGCATGAAGAAAGTTCTG 57.090 42.857 0.00 0.00 39.69 3.02
2000 2074 4.942483 CAGCATGAAGAAAGTTCTGGAGAT 59.058 41.667 0.00 0.00 39.69 2.75
2001 2075 4.942483 AGCATGAAGAAAGTTCTGGAGATG 59.058 41.667 0.00 0.00 37.65 2.90
2187 2261 7.439955 GTCATGACCGTATTATATTGTTGGACA 59.560 37.037 15.31 0.00 0.00 4.02
2226 2300 4.574674 TGATTTTGTAGCAGACCATCCT 57.425 40.909 0.00 0.00 0.00 3.24
2258 2332 0.716591 ATAGTGGAGGAGGTGTCCCA 59.283 55.000 0.00 0.00 45.26 4.37
2260 2334 0.716591 AGTGGAGGAGGTGTCCCATA 59.283 55.000 0.00 0.00 45.26 2.74
2274 2348 3.551259 CCATACGGTGGTCTTTGCT 57.449 52.632 1.24 0.00 43.44 3.91
2280 2354 0.606401 CGGTGGTCTTTGCTGGTCAT 60.606 55.000 0.00 0.00 0.00 3.06
2286 2360 2.508526 GTCTTTGCTGGTCATGTCCTT 58.491 47.619 10.43 0.00 0.00 3.36
2339 2413 8.023706 GCTATCATGTGTCGAAGATAGATACAA 58.976 37.037 17.20 0.00 41.67 2.41
2346 2420 5.971792 TGTCGAAGATAGATACAAAAGCTCG 59.028 40.000 0.00 0.00 40.67 5.03
2407 2495 2.532843 ACAGGAGTTTTACGGGCTAGA 58.467 47.619 0.00 0.00 0.00 2.43
2410 2498 2.496470 AGGAGTTTTACGGGCTAGACTG 59.504 50.000 1.68 1.68 0.00 3.51
2418 2506 1.467678 CGGGCTAGACTGGAGATGGG 61.468 65.000 0.00 0.00 0.00 4.00
2423 2511 2.690026 GCTAGACTGGAGATGGGGTGTA 60.690 54.545 0.00 0.00 0.00 2.90
2445 2533 9.906660 GTGTATTGATTGGTTGTTAAGATGAAA 57.093 29.630 0.00 0.00 0.00 2.69
2456 2544 1.064825 AAGATGAAACGGGACCCACT 58.935 50.000 12.15 0.00 0.00 4.00
2467 2555 2.552155 CGGGACCCACTCTGAAAATCAA 60.552 50.000 12.15 0.00 0.00 2.57
2470 2558 3.507622 GGACCCACTCTGAAAATCAAAGG 59.492 47.826 0.00 0.00 0.00 3.11
2475 2563 4.021981 CCACTCTGAAAATCAAAGGGGAAC 60.022 45.833 0.00 0.00 0.00 3.62
2476 2564 4.584325 CACTCTGAAAATCAAAGGGGAACA 59.416 41.667 0.00 0.00 0.00 3.18
2487 2575 4.019321 TCAAAGGGGAACAGATTAGTGAGG 60.019 45.833 0.00 0.00 0.00 3.86
2516 2604 8.033626 AGAAGGTTAGTCCGTTAATTCTTGTAG 58.966 37.037 0.00 0.00 41.99 2.74
2523 2611 8.672823 AGTCCGTTAATTCTTGTAGAAGTTTT 57.327 30.769 0.00 0.00 37.69 2.43
2524 2612 8.771766 AGTCCGTTAATTCTTGTAGAAGTTTTC 58.228 33.333 0.00 0.00 37.69 2.29
2525 2613 8.771766 GTCCGTTAATTCTTGTAGAAGTTTTCT 58.228 33.333 0.00 0.00 37.69 2.52
2604 2692 6.465084 AGACAAGACAACTATTAGTCCAACC 58.535 40.000 0.00 0.00 35.38 3.77
2623 2711 6.672218 TCCAACCTATTCGGATATATGGTCAT 59.328 38.462 8.59 0.00 36.31 3.06
2644 2732 9.837525 GGTCATGCTCTTTTCATCATAATATTC 57.162 33.333 0.00 0.00 0.00 1.75
2753 2842 3.064931 CGGGTGTTAGTTCTCTGGTTTC 58.935 50.000 0.00 0.00 0.00 2.78
2759 2848 7.159372 GGTGTTAGTTCTCTGGTTTCATCTTA 58.841 38.462 0.00 0.00 0.00 2.10
2771 2860 6.180472 TGGTTTCATCTTAATTCTCTCCACC 58.820 40.000 0.00 0.00 0.00 4.61
2775 2864 4.164221 TCATCTTAATTCTCTCCACCCACC 59.836 45.833 0.00 0.00 0.00 4.61
2776 2865 3.526899 TCTTAATTCTCTCCACCCACCA 58.473 45.455 0.00 0.00 0.00 4.17
2777 2866 3.263425 TCTTAATTCTCTCCACCCACCAC 59.737 47.826 0.00 0.00 0.00 4.16
2778 2867 1.747444 AATTCTCTCCACCCACCACT 58.253 50.000 0.00 0.00 0.00 4.00
2779 2868 2.642171 ATTCTCTCCACCCACCACTA 57.358 50.000 0.00 0.00 0.00 2.74
2780 2869 1.640917 TTCTCTCCACCCACCACTAC 58.359 55.000 0.00 0.00 0.00 2.73
2781 2870 0.252103 TCTCTCCACCCACCACTACC 60.252 60.000 0.00 0.00 0.00 3.18
2782 2871 1.605058 CTCTCCACCCACCACTACCG 61.605 65.000 0.00 0.00 0.00 4.02
2783 2872 2.605295 TCCACCCACCACTACCGG 60.605 66.667 0.00 0.00 0.00 5.28
2784 2873 2.605295 CCACCCACCACTACCGGA 60.605 66.667 9.46 0.00 0.00 5.14
2785 2874 2.660802 CACCCACCACTACCGGAC 59.339 66.667 9.46 0.00 0.00 4.79
2786 2875 1.911766 CACCCACCACTACCGGACT 60.912 63.158 9.46 0.00 0.00 3.85
2787 2876 0.612732 CACCCACCACTACCGGACTA 60.613 60.000 9.46 0.00 0.00 2.59
2788 2877 0.114954 ACCCACCACTACCGGACTAA 59.885 55.000 9.46 0.00 0.00 2.24
2789 2878 0.533951 CCCACCACTACCGGACTAAC 59.466 60.000 9.46 0.00 0.00 2.34
2790 2879 0.533951 CCACCACTACCGGACTAACC 59.466 60.000 9.46 0.00 0.00 2.85
2791 2880 0.533951 CACCACTACCGGACTAACCC 59.466 60.000 9.46 0.00 34.64 4.11
2792 2881 0.615827 ACCACTACCGGACTAACCCC 60.616 60.000 9.46 0.00 34.64 4.95
2793 2882 1.332889 CCACTACCGGACTAACCCCC 61.333 65.000 9.46 0.00 34.64 5.40
2815 2904 2.517875 GCCGTCGGCCTAGGTCTA 60.518 66.667 26.23 0.00 44.06 2.59
2816 2905 1.902432 GCCGTCGGCCTAGGTCTAT 60.902 63.158 26.23 0.00 44.06 1.98
2817 2906 1.957562 CCGTCGGCCTAGGTCTATG 59.042 63.158 12.53 5.93 0.00 2.23
2818 2907 1.286260 CGTCGGCCTAGGTCTATGC 59.714 63.158 12.53 0.00 0.00 3.14
2819 2908 1.666580 GTCGGCCTAGGTCTATGCC 59.333 63.158 12.53 12.39 41.54 4.40
2820 2909 1.113517 GTCGGCCTAGGTCTATGCCA 61.114 60.000 12.53 8.06 44.02 4.92
2821 2910 0.397957 TCGGCCTAGGTCTATGCCAA 60.398 55.000 12.53 3.61 44.02 4.52
2822 2911 0.249911 CGGCCTAGGTCTATGCCAAC 60.250 60.000 12.53 0.00 44.02 3.77
2823 2912 0.249911 GGCCTAGGTCTATGCCAACG 60.250 60.000 11.31 0.00 43.52 4.10
2824 2913 0.249911 GCCTAGGTCTATGCCAACGG 60.250 60.000 11.31 0.00 0.00 4.44
2825 2914 1.120530 CCTAGGTCTATGCCAACGGT 58.879 55.000 0.00 0.00 0.00 4.83
2826 2915 1.202533 CCTAGGTCTATGCCAACGGTG 60.203 57.143 0.00 0.00 0.00 4.94
2844 2933 3.913582 GCCGTCGGCGTAGATAAC 58.086 61.111 22.50 0.00 39.62 1.89
2845 2934 1.064621 GCCGTCGGCGTAGATAACA 59.935 57.895 22.50 0.00 39.62 2.41
2846 2935 0.318445 GCCGTCGGCGTAGATAACAT 60.318 55.000 22.50 0.00 39.62 2.71
2847 2936 1.682982 CCGTCGGCGTAGATAACATC 58.317 55.000 9.28 0.00 36.15 3.06
2848 2937 1.002142 CCGTCGGCGTAGATAACATCA 60.002 52.381 9.28 0.00 36.15 3.07
2849 2938 2.542205 CCGTCGGCGTAGATAACATCAA 60.542 50.000 9.28 0.00 36.15 2.57
2850 2939 2.466571 CGTCGGCGTAGATAACATCAAC 59.533 50.000 6.85 0.00 0.00 3.18
2851 2940 2.466571 GTCGGCGTAGATAACATCAACG 59.533 50.000 6.85 0.00 0.00 4.10
2852 2941 2.097954 TCGGCGTAGATAACATCAACGT 59.902 45.455 6.85 0.00 0.00 3.99
2853 2942 3.312146 TCGGCGTAGATAACATCAACGTA 59.688 43.478 6.85 0.00 0.00 3.57
2854 2943 3.419922 CGGCGTAGATAACATCAACGTAC 59.580 47.826 0.00 0.00 0.00 3.67
2855 2944 4.604976 GGCGTAGATAACATCAACGTACT 58.395 43.478 0.00 0.00 0.00 2.73
2856 2945 5.039333 GGCGTAGATAACATCAACGTACTT 58.961 41.667 0.00 0.00 0.00 2.24
2857 2946 5.051907 GGCGTAGATAACATCAACGTACTTG 60.052 44.000 0.00 0.00 0.00 3.16
2858 2947 5.514204 GCGTAGATAACATCAACGTACTTGT 59.486 40.000 0.00 0.00 0.00 3.16
2859 2948 6.505888 GCGTAGATAACATCAACGTACTTGTG 60.506 42.308 0.00 0.00 0.00 3.33
2860 2949 6.525628 CGTAGATAACATCAACGTACTTGTGT 59.474 38.462 0.00 0.79 0.00 3.72
2861 2950 6.946229 AGATAACATCAACGTACTTGTGTC 57.054 37.500 0.00 0.00 0.00 3.67
2862 2951 6.452242 AGATAACATCAACGTACTTGTGTCA 58.548 36.000 0.00 0.00 0.00 3.58
2863 2952 6.926826 AGATAACATCAACGTACTTGTGTCAA 59.073 34.615 0.00 0.00 0.00 3.18
2864 2953 5.804692 AACATCAACGTACTTGTGTCAAA 57.195 34.783 0.00 0.00 0.00 2.69
2865 2954 5.151632 ACATCAACGTACTTGTGTCAAAC 57.848 39.130 0.00 0.00 0.00 2.93
2866 2955 4.034742 ACATCAACGTACTTGTGTCAAACC 59.965 41.667 0.00 0.00 0.00 3.27
2867 2956 2.604011 TCAACGTACTTGTGTCAAACCG 59.396 45.455 0.00 0.00 0.00 4.44
2868 2957 2.298411 ACGTACTTGTGTCAAACCGT 57.702 45.000 0.00 0.00 0.00 4.83
2869 2958 2.195922 ACGTACTTGTGTCAAACCGTC 58.804 47.619 0.00 0.00 0.00 4.79
2870 2959 1.188573 CGTACTTGTGTCAAACCGTCG 59.811 52.381 0.00 0.00 0.00 5.12
2871 2960 1.523934 GTACTTGTGTCAAACCGTCGG 59.476 52.381 10.48 10.48 0.00 4.79
2872 2961 1.278637 CTTGTGTCAAACCGTCGGC 59.721 57.895 12.28 0.00 0.00 5.54
2873 2962 1.433053 CTTGTGTCAAACCGTCGGCA 61.433 55.000 12.28 0.00 0.00 5.69
2874 2963 0.816018 TTGTGTCAAACCGTCGGCAT 60.816 50.000 12.28 0.00 0.00 4.40
2875 2964 0.033642 TGTGTCAAACCGTCGGCATA 59.966 50.000 12.28 0.00 0.00 3.14
2876 2965 0.719465 GTGTCAAACCGTCGGCATAG 59.281 55.000 12.28 0.00 0.00 2.23
2877 2966 0.390603 TGTCAAACCGTCGGCATAGG 60.391 55.000 12.28 0.00 0.00 2.57
2878 2967 1.448893 TCAAACCGTCGGCATAGGC 60.449 57.895 12.28 0.00 40.13 3.93
2879 2968 1.743623 CAAACCGTCGGCATAGGCA 60.744 57.895 12.28 0.00 43.71 4.75
2880 2969 1.095228 CAAACCGTCGGCATAGGCAT 61.095 55.000 12.28 0.00 43.71 4.40
2881 2970 0.466543 AAACCGTCGGCATAGGCATA 59.533 50.000 12.28 0.00 43.71 3.14
2882 2971 0.685097 AACCGTCGGCATAGGCATAT 59.315 50.000 12.28 0.00 43.71 1.78
2883 2972 1.552578 ACCGTCGGCATAGGCATATA 58.447 50.000 12.28 0.00 43.71 0.86
2884 2973 2.108168 ACCGTCGGCATAGGCATATAT 58.892 47.619 12.28 0.00 43.71 0.86
2885 2974 2.159099 ACCGTCGGCATAGGCATATATG 60.159 50.000 12.28 8.45 43.71 1.78
2898 2987 2.185262 CATATATGCCGACGACATCCG 58.815 52.381 0.00 0.00 45.44 4.18
2907 2996 2.787249 CGACATCCGTACGTCCGT 59.213 61.111 15.21 7.45 0.00 4.69
2908 2997 1.297158 CGACATCCGTACGTCCGTC 60.297 63.158 15.21 14.86 0.00 4.79
2909 2998 1.796151 GACATCCGTACGTCCGTCA 59.204 57.895 15.21 0.00 0.00 4.35
2910 2999 0.247974 GACATCCGTACGTCCGTCAG 60.248 60.000 15.21 0.00 0.00 3.51
2911 3000 1.585521 CATCCGTACGTCCGTCAGC 60.586 63.158 15.21 0.00 0.00 4.26
2912 3001 2.042259 ATCCGTACGTCCGTCAGCA 61.042 57.895 15.21 0.00 0.00 4.41
2913 3002 1.381928 ATCCGTACGTCCGTCAGCAT 61.382 55.000 15.21 0.00 0.00 3.79
2914 3003 0.744057 TCCGTACGTCCGTCAGCATA 60.744 55.000 15.21 0.00 0.00 3.14
2915 3004 0.316772 CCGTACGTCCGTCAGCATAG 60.317 60.000 15.21 0.00 0.00 2.23
2916 3005 0.654160 CGTACGTCCGTCAGCATAGA 59.346 55.000 7.22 0.00 0.00 1.98
2917 3006 1.263484 CGTACGTCCGTCAGCATAGAT 59.737 52.381 7.22 0.00 0.00 1.98
2918 3007 2.477754 CGTACGTCCGTCAGCATAGATA 59.522 50.000 7.22 0.00 0.00 1.98
2919 3008 3.663754 CGTACGTCCGTCAGCATAGATAC 60.664 52.174 7.22 0.00 0.00 2.24
2920 3009 2.294979 ACGTCCGTCAGCATAGATACA 58.705 47.619 0.00 0.00 0.00 2.29
2921 3010 2.033049 ACGTCCGTCAGCATAGATACAC 59.967 50.000 0.00 0.00 0.00 2.90
2922 3011 2.604855 CGTCCGTCAGCATAGATACACC 60.605 54.545 0.00 0.00 0.00 4.16
2923 3012 1.607148 TCCGTCAGCATAGATACACCG 59.393 52.381 0.00 0.00 0.00 4.94
2924 3013 1.337071 CCGTCAGCATAGATACACCGT 59.663 52.381 0.00 0.00 0.00 4.83
2925 3014 2.604855 CCGTCAGCATAGATACACCGTC 60.605 54.545 0.00 0.00 0.00 4.79
2926 3015 2.651701 GTCAGCATAGATACACCGTCG 58.348 52.381 0.00 0.00 0.00 5.12
2927 3016 1.607148 TCAGCATAGATACACCGTCGG 59.393 52.381 10.48 10.48 0.00 4.79
2928 3017 0.314302 AGCATAGATACACCGTCGGC 59.686 55.000 12.28 0.00 0.00 5.54
2929 3018 0.031585 GCATAGATACACCGTCGGCA 59.968 55.000 12.28 0.00 0.00 5.69
2930 3019 1.930817 GCATAGATACACCGTCGGCAG 60.931 57.143 12.28 7.01 0.00 4.85
2931 3020 1.607148 CATAGATACACCGTCGGCAGA 59.393 52.381 12.28 0.00 0.00 4.26
2932 3021 1.306148 TAGATACACCGTCGGCAGAG 58.694 55.000 12.28 1.38 0.00 3.35
2933 3022 0.393944 AGATACACCGTCGGCAGAGA 60.394 55.000 12.28 0.00 0.00 3.10
2934 3023 0.669077 GATACACCGTCGGCAGAGAT 59.331 55.000 12.28 3.94 0.00 2.75
2935 3024 1.067212 GATACACCGTCGGCAGAGATT 59.933 52.381 12.28 0.00 0.00 2.40
2936 3025 1.753930 TACACCGTCGGCAGAGATTA 58.246 50.000 12.28 0.00 0.00 1.75
2937 3026 1.112113 ACACCGTCGGCAGAGATTAT 58.888 50.000 12.28 0.00 0.00 1.28
2938 3027 1.067212 ACACCGTCGGCAGAGATTATC 59.933 52.381 12.28 0.00 0.00 1.75
2939 3028 1.067060 CACCGTCGGCAGAGATTATCA 59.933 52.381 12.28 0.00 0.00 2.15
2940 3029 1.067212 ACCGTCGGCAGAGATTATCAC 59.933 52.381 12.28 0.00 0.00 3.06
2941 3030 1.603172 CCGTCGGCAGAGATTATCACC 60.603 57.143 0.00 0.00 0.00 4.02
2942 3031 1.067060 CGTCGGCAGAGATTATCACCA 59.933 52.381 0.00 0.00 0.00 4.17
2943 3032 2.748605 GTCGGCAGAGATTATCACCAG 58.251 52.381 0.00 0.00 0.00 4.00
2944 3033 2.362397 GTCGGCAGAGATTATCACCAGA 59.638 50.000 0.00 0.00 0.00 3.86
2945 3034 2.362397 TCGGCAGAGATTATCACCAGAC 59.638 50.000 0.00 0.00 0.00 3.51
2946 3035 2.101415 CGGCAGAGATTATCACCAGACA 59.899 50.000 0.00 0.00 0.00 3.41
2947 3036 3.726607 GGCAGAGATTATCACCAGACAG 58.273 50.000 0.00 0.00 0.00 3.51
2948 3037 3.129871 GCAGAGATTATCACCAGACAGC 58.870 50.000 0.00 0.00 0.00 4.40
2949 3038 3.379240 CAGAGATTATCACCAGACAGCG 58.621 50.000 0.00 0.00 0.00 5.18
2950 3039 2.131183 GAGATTATCACCAGACAGCGC 58.869 52.381 0.00 0.00 0.00 5.92
2951 3040 1.202580 AGATTATCACCAGACAGCGCC 60.203 52.381 2.29 0.00 0.00 6.53
2952 3041 0.541392 ATTATCACCAGACAGCGCCA 59.459 50.000 2.29 0.00 0.00 5.69
2953 3042 0.541392 TTATCACCAGACAGCGCCAT 59.459 50.000 2.29 0.00 0.00 4.40
2954 3043 0.104855 TATCACCAGACAGCGCCATC 59.895 55.000 2.29 1.06 0.00 3.51
2955 3044 1.902765 ATCACCAGACAGCGCCATCA 61.903 55.000 2.29 0.00 0.00 3.07
2956 3045 2.046892 ACCAGACAGCGCCATCAC 60.047 61.111 2.29 0.00 0.00 3.06
2957 3046 2.046988 CCAGACAGCGCCATCACA 60.047 61.111 2.29 0.00 0.00 3.58
2958 3047 2.393768 CCAGACAGCGCCATCACAC 61.394 63.158 2.29 0.00 0.00 3.82
2959 3048 1.668793 CAGACAGCGCCATCACACA 60.669 57.895 2.29 0.00 0.00 3.72
2960 3049 1.669115 AGACAGCGCCATCACACAC 60.669 57.895 2.29 0.00 0.00 3.82
2961 3050 3.015293 GACAGCGCCATCACACACG 62.015 63.158 2.29 0.00 0.00 4.49
2965 3054 2.738139 CGCCATCACACACGCTGA 60.738 61.111 0.00 0.00 0.00 4.26
2966 3055 2.863153 GCCATCACACACGCTGAC 59.137 61.111 0.00 0.00 0.00 3.51
2967 3056 2.680913 GCCATCACACACGCTGACC 61.681 63.158 0.00 0.00 0.00 4.02
2968 3057 1.301637 CCATCACACACGCTGACCA 60.302 57.895 0.00 0.00 0.00 4.02
2969 3058 1.293963 CCATCACACACGCTGACCAG 61.294 60.000 0.00 0.00 0.00 4.00
2970 3059 1.004560 ATCACACACGCTGACCAGG 60.005 57.895 0.00 0.00 0.00 4.45
2971 3060 3.349006 CACACACGCTGACCAGGC 61.349 66.667 0.00 0.00 0.00 4.85
2972 3061 4.626081 ACACACGCTGACCAGGCC 62.626 66.667 0.00 0.00 0.00 5.19
2988 3077 2.890474 CCGTCGGCATACCTGTGC 60.890 66.667 0.00 0.00 44.31 4.57
2995 3084 2.109431 GCATACCTGTGCCACATGG 58.891 57.895 0.00 4.88 39.18 3.66
3005 3094 3.136123 CCACATGGCGCTCCTTGG 61.136 66.667 7.64 5.77 40.70 3.61
3006 3095 2.360350 CACATGGCGCTCCTTGGT 60.360 61.111 7.64 0.00 40.70 3.67
3007 3096 1.973281 CACATGGCGCTCCTTGGTT 60.973 57.895 7.64 0.00 40.70 3.67
3008 3097 1.228552 ACATGGCGCTCCTTGGTTT 60.229 52.632 7.64 0.00 40.70 3.27
3009 3098 1.244019 ACATGGCGCTCCTTGGTTTC 61.244 55.000 7.64 0.00 40.70 2.78
3010 3099 0.962356 CATGGCGCTCCTTGGTTTCT 60.962 55.000 7.64 0.00 34.75 2.52
3011 3100 0.678048 ATGGCGCTCCTTGGTTTCTC 60.678 55.000 7.64 0.00 0.00 2.87
3012 3101 2.041115 GGCGCTCCTTGGTTTCTCC 61.041 63.158 7.64 0.00 0.00 3.71
3013 3102 1.003233 GCGCTCCTTGGTTTCTCCT 60.003 57.895 0.00 0.00 37.07 3.69
3014 3103 1.301677 GCGCTCCTTGGTTTCTCCTG 61.302 60.000 0.00 0.00 37.07 3.86
3015 3104 0.674895 CGCTCCTTGGTTTCTCCTGG 60.675 60.000 0.00 0.00 37.07 4.45
3016 3105 0.693049 GCTCCTTGGTTTCTCCTGGA 59.307 55.000 0.00 0.00 37.70 3.86
3017 3106 1.611936 GCTCCTTGGTTTCTCCTGGAC 60.612 57.143 0.00 0.00 36.30 4.02
3018 3107 1.699634 CTCCTTGGTTTCTCCTGGACA 59.300 52.381 0.00 0.00 36.30 4.02
3019 3108 2.307098 CTCCTTGGTTTCTCCTGGACAT 59.693 50.000 0.00 0.00 36.30 3.06
3020 3109 2.040278 TCCTTGGTTTCTCCTGGACATG 59.960 50.000 0.00 0.00 35.73 3.21
3021 3110 2.440409 CTTGGTTTCTCCTGGACATGG 58.560 52.381 0.00 0.00 37.07 3.66
3022 3111 0.038166 TGGTTTCTCCTGGACATGGC 59.962 55.000 0.00 0.00 37.07 4.40
3023 3112 0.329596 GGTTTCTCCTGGACATGGCT 59.670 55.000 0.00 0.00 0.00 4.75
3024 3113 1.559682 GGTTTCTCCTGGACATGGCTA 59.440 52.381 0.00 0.00 0.00 3.93
3025 3114 2.173569 GGTTTCTCCTGGACATGGCTAT 59.826 50.000 0.00 0.00 0.00 2.97
3026 3115 3.209410 GTTTCTCCTGGACATGGCTATG 58.791 50.000 8.74 8.74 40.24 2.23
3034 3123 1.447643 ACATGGCTATGTCGAGGGC 59.552 57.895 10.30 0.00 44.00 5.19
3035 3124 1.302033 CATGGCTATGTCGAGGGCC 60.302 63.158 1.12 0.00 44.31 5.80
3037 3126 2.423446 GGCTATGTCGAGGGCCAG 59.577 66.667 6.18 0.00 43.59 4.85
3038 3127 2.423446 GCTATGTCGAGGGCCAGG 59.577 66.667 6.18 0.00 0.00 4.45
3039 3128 2.423446 CTATGTCGAGGGCCAGGC 59.577 66.667 6.18 1.26 0.00 4.85
3146 3737 2.127003 GCCGCTTGTAAACCGCAC 60.127 61.111 0.00 0.00 0.00 5.34
3147 3738 2.613506 GCCGCTTGTAAACCGCACT 61.614 57.895 0.00 0.00 0.00 4.40
3164 3755 2.359531 GCACTGTCTCCGAGCTAGTATT 59.640 50.000 0.00 0.00 0.00 1.89
3179 3770 4.523558 GCTAGTATTTGGGTATCGAGAGGT 59.476 45.833 0.00 0.00 0.00 3.85
3183 3774 5.895534 AGTATTTGGGTATCGAGAGGTAACA 59.104 40.000 0.00 0.00 35.62 2.41
3189 3780 3.635373 GGTATCGAGAGGTAACATGTCCA 59.365 47.826 0.00 0.00 33.56 4.02
3190 3781 4.098960 GGTATCGAGAGGTAACATGTCCAA 59.901 45.833 0.00 0.00 33.56 3.53
3195 3786 4.437390 CGAGAGGTAACATGTCCAATTTGC 60.437 45.833 0.00 0.00 41.41 3.68
3222 3813 3.238108 AGTGCTAGTCATGTTTCTCCG 57.762 47.619 0.00 0.00 0.00 4.63
3252 3843 3.849145 CGAAACTTCTCGTGCTCTAAGAG 59.151 47.826 0.00 0.00 36.39 2.85
3284 3875 3.661911 GCATGTGCCACGGTGTAA 58.338 55.556 7.45 0.00 34.31 2.41
3285 3876 1.209127 GCATGTGCCACGGTGTAAC 59.791 57.895 7.45 5.52 34.31 2.50
3286 3877 1.495509 CATGTGCCACGGTGTAACG 59.504 57.895 7.45 0.00 38.12 3.18
3287 3878 2.322081 ATGTGCCACGGTGTAACGC 61.322 57.895 7.45 3.83 38.12 4.84
3288 3879 3.719144 GTGCCACGGTGTAACGCC 61.719 66.667 7.45 0.00 38.12 5.68
3289 3880 4.992511 TGCCACGGTGTAACGCCC 62.993 66.667 7.45 0.00 38.12 6.13
3290 3881 4.692475 GCCACGGTGTAACGCCCT 62.692 66.667 7.45 0.00 38.12 5.19
3291 3882 2.740826 CCACGGTGTAACGCCCTG 60.741 66.667 7.45 0.00 38.12 4.45
3292 3883 2.740826 CACGGTGTAACGCCCTGG 60.741 66.667 0.00 0.00 38.12 4.45
3293 3884 2.918802 ACGGTGTAACGCCCTGGA 60.919 61.111 0.00 0.00 38.12 3.86
3294 3885 2.433664 CGGTGTAACGCCCTGGAC 60.434 66.667 0.00 0.00 38.12 4.02
3295 3886 2.745037 GGTGTAACGCCCTGGACA 59.255 61.111 0.00 0.00 38.12 4.02
3296 3887 1.670083 GGTGTAACGCCCTGGACAC 60.670 63.158 6.98 6.98 41.17 3.67
3297 3888 1.070105 GTGTAACGCCCTGGACACA 59.930 57.895 9.90 0.00 41.46 3.72
3298 3889 1.070105 TGTAACGCCCTGGACACAC 59.930 57.895 0.00 0.00 0.00 3.82
3299 3890 1.670083 GTAACGCCCTGGACACACC 60.670 63.158 0.00 0.00 39.54 4.16
3300 3891 2.886134 TAACGCCCTGGACACACCC 61.886 63.158 0.00 0.00 38.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 2.170607 GCCATTCTACCCTAGAACTGCA 59.829 50.000 0.00 0.00 46.58 4.41
33 34 3.379445 GGTCGAAGAGGGTCGCCA 61.379 66.667 0.00 0.00 40.88 5.69
161 163 2.352225 CGCAGAGCTGACAGAAGTAAGT 60.352 50.000 6.65 0.00 0.00 2.24
172 174 0.319900 GGTTTCTGACGCAGAGCTGA 60.320 55.000 0.85 0.00 41.75 4.26
248 250 1.414866 TTGTGCCACAGTCCCAGCTA 61.415 55.000 0.00 0.00 0.00 3.32
340 342 1.077787 CCATTGGTGCGGGCTCTTA 60.078 57.895 0.00 0.00 0.00 2.10
341 343 2.361610 CCATTGGTGCGGGCTCTT 60.362 61.111 0.00 0.00 0.00 2.85
359 361 2.035237 AACGTCCGCACTCCCTTTCA 62.035 55.000 0.00 0.00 0.00 2.69
396 403 1.956869 TCTCTCCTGCCAAATCTCCA 58.043 50.000 0.00 0.00 0.00 3.86
434 441 1.735198 GTACGCACGGCAGTTGCTA 60.735 57.895 3.88 0.83 41.70 3.49
451 458 0.322098 TGCGTTTGATGATTCCGGGT 60.322 50.000 0.00 0.00 0.00 5.28
454 461 2.538037 TCGTATGCGTTTGATGATTCCG 59.462 45.455 2.37 0.00 39.49 4.30
725 741 0.467290 TTGCCGAGTCAAAAAGGGCT 60.467 50.000 6.12 0.00 44.07 5.19
729 745 0.998727 GCGCTTGCCGAGTCAAAAAG 60.999 55.000 0.00 0.00 40.02 2.27
730 746 1.008995 GCGCTTGCCGAGTCAAAAA 60.009 52.632 0.00 0.00 40.02 1.94
784 804 0.973632 TACGAGCCTTCTTGCTTGGA 59.026 50.000 5.35 0.00 45.40 3.53
1148 1187 2.801996 CAAAGTCGACGGCGCGTA 60.802 61.111 5.31 0.00 41.37 4.42
1169 1208 6.649557 CCGAAGAAGTATTGTACTGACCTTTT 59.350 38.462 0.00 0.00 39.39 2.27
1237 1283 9.023962 TGAAATTGAAAGCCACAAATATACTCT 57.976 29.630 0.00 0.00 0.00 3.24
1238 1284 9.638239 TTGAAATTGAAAGCCACAAATATACTC 57.362 29.630 0.00 0.00 0.00 2.59
1239 1285 9.643693 CTTGAAATTGAAAGCCACAAATATACT 57.356 29.630 0.00 0.00 0.00 2.12
1240 1286 9.423061 ACTTGAAATTGAAAGCCACAAATATAC 57.577 29.630 1.28 0.00 0.00 1.47
1272 1326 2.317973 CAGGAGAGAGATGGATCAGCA 58.682 52.381 0.00 0.00 0.00 4.41
1273 1327 1.001181 GCAGGAGAGAGATGGATCAGC 59.999 57.143 0.00 0.00 0.00 4.26
1280 1334 1.872388 CTGCATGCAGGAGAGAGATG 58.128 55.000 35.39 10.64 38.04 2.90
1336 1397 1.204941 GAGCTTCTTCGTGGCCTTAGA 59.795 52.381 3.32 0.00 0.00 2.10
1338 1399 0.973632 TGAGCTTCTTCGTGGCCTTA 59.026 50.000 3.32 0.00 0.00 2.69
1363 1430 2.163601 GAGCCCCGTGGTAAGACGTT 62.164 60.000 0.00 0.00 37.66 3.99
1364 1431 2.602568 AGCCCCGTGGTAAGACGT 60.603 61.111 0.00 0.00 37.66 4.34
1369 1436 3.065306 CACTGAGCCCCGTGGTAA 58.935 61.111 0.00 0.00 0.00 2.85
1398 1465 0.108186 CATTGGTGAGCACGAGCCTA 60.108 55.000 0.00 0.00 43.56 3.93
1467 1534 1.385528 GGTGGAACGTGTGGTCTTTT 58.614 50.000 0.00 0.00 38.12 2.27
1594 1661 9.176181 CGTGTAACTTTTTGTATGTTTAGCATT 57.824 29.630 0.00 0.00 35.02 3.56
1595 1662 7.325097 GCGTGTAACTTTTTGTATGTTTAGCAT 59.675 33.333 0.00 0.00 36.70 3.79
1596 1663 6.633634 GCGTGTAACTTTTTGTATGTTTAGCA 59.366 34.615 0.00 0.00 31.75 3.49
1597 1664 6.633634 TGCGTGTAACTTTTTGTATGTTTAGC 59.366 34.615 0.00 0.00 31.75 3.09
1598 1665 8.549777 TTGCGTGTAACTTTTTGTATGTTTAG 57.450 30.769 0.00 0.00 31.75 1.85
1599 1666 9.517609 AATTGCGTGTAACTTTTTGTATGTTTA 57.482 25.926 0.00 0.00 31.75 2.01
1600 1667 7.995463 ATTGCGTGTAACTTTTTGTATGTTT 57.005 28.000 0.00 0.00 31.75 2.83
1601 1668 7.995463 AATTGCGTGTAACTTTTTGTATGTT 57.005 28.000 0.00 0.00 31.75 2.71
1602 1669 8.129840 TGTAATTGCGTGTAACTTTTTGTATGT 58.870 29.630 0.00 0.00 31.75 2.29
1603 1670 8.414173 GTGTAATTGCGTGTAACTTTTTGTATG 58.586 33.333 0.00 0.00 31.75 2.39
1604 1671 7.321746 CGTGTAATTGCGTGTAACTTTTTGTAT 59.678 33.333 0.00 0.00 31.75 2.29
1605 1672 6.628065 CGTGTAATTGCGTGTAACTTTTTGTA 59.372 34.615 0.00 0.00 31.75 2.41
1606 1673 5.452944 CGTGTAATTGCGTGTAACTTTTTGT 59.547 36.000 0.00 0.00 31.75 2.83
1607 1674 5.606515 GCGTGTAATTGCGTGTAACTTTTTG 60.607 40.000 0.00 0.00 31.75 2.44
1608 1675 4.438471 GCGTGTAATTGCGTGTAACTTTTT 59.562 37.500 0.00 0.00 31.75 1.94
1609 1676 3.969981 GCGTGTAATTGCGTGTAACTTTT 59.030 39.130 0.00 0.00 31.75 2.27
1610 1677 3.249080 AGCGTGTAATTGCGTGTAACTTT 59.751 39.130 0.00 0.00 35.87 2.66
1611 1678 2.803956 AGCGTGTAATTGCGTGTAACTT 59.196 40.909 0.00 0.00 35.87 2.66
1612 1679 2.156891 CAGCGTGTAATTGCGTGTAACT 59.843 45.455 0.00 0.00 35.87 2.24
1613 1680 2.156117 TCAGCGTGTAATTGCGTGTAAC 59.844 45.455 0.00 0.00 35.87 2.50
1614 1681 2.156117 GTCAGCGTGTAATTGCGTGTAA 59.844 45.455 0.00 0.00 35.87 2.41
1615 1682 1.722464 GTCAGCGTGTAATTGCGTGTA 59.278 47.619 0.00 0.00 35.87 2.90
1616 1683 0.511221 GTCAGCGTGTAATTGCGTGT 59.489 50.000 0.00 0.00 35.87 4.49
1617 1684 0.790207 AGTCAGCGTGTAATTGCGTG 59.210 50.000 0.00 0.00 35.87 5.34
1618 1685 2.094906 TCTAGTCAGCGTGTAATTGCGT 60.095 45.455 0.00 0.00 35.87 5.24
1619 1686 2.526077 TCTAGTCAGCGTGTAATTGCG 58.474 47.619 0.00 0.00 35.87 4.85
1620 1687 5.470845 AATTCTAGTCAGCGTGTAATTGC 57.529 39.130 0.00 0.00 0.00 3.56
1643 1710 8.500773 GTTCGTGATTGGTTAGTAGATGAAAAA 58.499 33.333 0.00 0.00 0.00 1.94
1644 1711 7.876068 AGTTCGTGATTGGTTAGTAGATGAAAA 59.124 33.333 0.00 0.00 0.00 2.29
1645 1712 7.383687 AGTTCGTGATTGGTTAGTAGATGAAA 58.616 34.615 0.00 0.00 0.00 2.69
1646 1713 6.931838 AGTTCGTGATTGGTTAGTAGATGAA 58.068 36.000 0.00 0.00 0.00 2.57
1647 1714 6.525578 AGTTCGTGATTGGTTAGTAGATGA 57.474 37.500 0.00 0.00 0.00 2.92
1648 1715 6.455646 GCAAGTTCGTGATTGGTTAGTAGATG 60.456 42.308 0.00 0.00 0.00 2.90
1649 1716 5.581085 GCAAGTTCGTGATTGGTTAGTAGAT 59.419 40.000 0.00 0.00 0.00 1.98
1650 1717 4.927425 GCAAGTTCGTGATTGGTTAGTAGA 59.073 41.667 0.00 0.00 0.00 2.59
1651 1718 4.092968 GGCAAGTTCGTGATTGGTTAGTAG 59.907 45.833 0.00 0.00 0.00 2.57
1652 1719 3.998341 GGCAAGTTCGTGATTGGTTAGTA 59.002 43.478 0.00 0.00 0.00 1.82
1653 1720 2.812011 GGCAAGTTCGTGATTGGTTAGT 59.188 45.455 0.00 0.00 0.00 2.24
1654 1721 2.161609 GGGCAAGTTCGTGATTGGTTAG 59.838 50.000 0.00 0.00 0.00 2.34
1655 1722 2.156098 GGGCAAGTTCGTGATTGGTTA 58.844 47.619 0.00 0.00 0.00 2.85
1656 1723 0.958822 GGGCAAGTTCGTGATTGGTT 59.041 50.000 0.00 0.00 0.00 3.67
1657 1724 0.893727 GGGGCAAGTTCGTGATTGGT 60.894 55.000 0.00 0.00 0.00 3.67
1658 1725 1.595093 GGGGGCAAGTTCGTGATTGG 61.595 60.000 0.00 0.00 0.00 3.16
1659 1726 1.883021 GGGGGCAAGTTCGTGATTG 59.117 57.895 0.00 0.00 0.00 2.67
1660 1727 4.415783 GGGGGCAAGTTCGTGATT 57.584 55.556 0.00 0.00 0.00 2.57
1674 1741 3.365472 CACCTTCCTGAAAATTAGGGGG 58.635 50.000 0.00 0.00 35.96 5.40
1675 1742 3.011257 TCCACCTTCCTGAAAATTAGGGG 59.989 47.826 0.00 0.00 35.96 4.79
1676 1743 4.017126 GTCCACCTTCCTGAAAATTAGGG 58.983 47.826 0.00 0.00 35.96 3.53
1677 1744 4.017126 GGTCCACCTTCCTGAAAATTAGG 58.983 47.826 0.00 0.00 36.63 2.69
1678 1745 3.689649 CGGTCCACCTTCCTGAAAATTAG 59.310 47.826 0.00 0.00 0.00 1.73
1679 1746 3.681593 CGGTCCACCTTCCTGAAAATTA 58.318 45.455 0.00 0.00 0.00 1.40
1680 1747 2.514803 CGGTCCACCTTCCTGAAAATT 58.485 47.619 0.00 0.00 0.00 1.82
1681 1748 1.886655 GCGGTCCACCTTCCTGAAAAT 60.887 52.381 0.00 0.00 0.00 1.82
1682 1749 0.536460 GCGGTCCACCTTCCTGAAAA 60.536 55.000 0.00 0.00 0.00 2.29
1683 1750 1.072505 GCGGTCCACCTTCCTGAAA 59.927 57.895 0.00 0.00 0.00 2.69
1684 1751 2.747686 GCGGTCCACCTTCCTGAA 59.252 61.111 0.00 0.00 0.00 3.02
1685 1752 3.319198 GGCGGTCCACCTTCCTGA 61.319 66.667 0.00 0.00 0.00 3.86
1686 1753 3.316573 GAGGCGGTCCACCTTCCTG 62.317 68.421 0.00 0.00 37.77 3.86
1687 1754 3.003763 GAGGCGGTCCACCTTCCT 61.004 66.667 0.00 6.22 37.77 3.36
1688 1755 4.097361 GGAGGCGGTCCACCTTCC 62.097 72.222 0.00 0.00 46.10 3.46
1696 1763 2.728435 AATACGTGGGGAGGCGGTC 61.728 63.158 0.00 0.00 0.00 4.79
1697 1764 2.686106 AATACGTGGGGAGGCGGT 60.686 61.111 0.00 0.00 0.00 5.68
1698 1765 2.203015 CAATACGTGGGGAGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
1699 1766 1.520787 GTCAATACGTGGGGAGGCG 60.521 63.158 0.00 0.00 0.00 5.52
1700 1767 1.153229 GGTCAATACGTGGGGAGGC 60.153 63.158 0.00 0.00 0.00 4.70
1701 1768 0.616371 TTGGTCAATACGTGGGGAGG 59.384 55.000 0.00 0.00 0.00 4.30
1702 1769 2.093181 TGATTGGTCAATACGTGGGGAG 60.093 50.000 0.00 0.00 0.00 4.30
1703 1770 1.909986 TGATTGGTCAATACGTGGGGA 59.090 47.619 0.00 0.00 0.00 4.81
1704 1771 2.411628 TGATTGGTCAATACGTGGGG 57.588 50.000 0.00 0.00 0.00 4.96
1705 1772 4.981806 ATTTGATTGGTCAATACGTGGG 57.018 40.909 0.00 0.00 43.49 4.61
1706 1773 7.535139 AGTTAATTTGATTGGTCAATACGTGG 58.465 34.615 0.00 0.00 43.49 4.94
1707 1774 8.450964 AGAGTTAATTTGATTGGTCAATACGTG 58.549 33.333 0.00 0.00 43.49 4.49
1708 1775 8.561738 AGAGTTAATTTGATTGGTCAATACGT 57.438 30.769 0.00 0.00 43.49 3.57
1709 1776 9.840427 AAAGAGTTAATTTGATTGGTCAATACG 57.160 29.630 0.00 0.00 43.49 3.06
1713 1780 9.883142 ACAAAAAGAGTTAATTTGATTGGTCAA 57.117 25.926 5.68 0.00 42.41 3.18
1737 1804 8.987890 GGTACAAACGATTTACTAGGTTTTACA 58.012 33.333 0.00 0.00 30.73 2.41
1738 1805 9.208022 AGGTACAAACGATTTACTAGGTTTTAC 57.792 33.333 0.00 0.98 30.73 2.01
1739 1806 9.206870 CAGGTACAAACGATTTACTAGGTTTTA 57.793 33.333 0.00 0.00 30.73 1.52
1740 1807 7.716560 ACAGGTACAAACGATTTACTAGGTTTT 59.283 33.333 0.00 0.00 30.73 2.43
1741 1808 7.219322 ACAGGTACAAACGATTTACTAGGTTT 58.781 34.615 0.00 0.00 33.19 3.27
1742 1809 6.762333 ACAGGTACAAACGATTTACTAGGTT 58.238 36.000 0.00 0.00 0.00 3.50
1743 1810 6.350629 ACAGGTACAAACGATTTACTAGGT 57.649 37.500 0.00 0.00 0.00 3.08
1744 1811 6.474751 GCTACAGGTACAAACGATTTACTAGG 59.525 42.308 0.00 0.00 0.00 3.02
1745 1812 7.031372 TGCTACAGGTACAAACGATTTACTAG 58.969 38.462 0.00 0.00 0.00 2.57
1746 1813 6.923012 TGCTACAGGTACAAACGATTTACTA 58.077 36.000 0.00 0.00 0.00 1.82
1747 1814 5.786311 TGCTACAGGTACAAACGATTTACT 58.214 37.500 0.00 0.00 0.00 2.24
1748 1815 6.657836 ATGCTACAGGTACAAACGATTTAC 57.342 37.500 0.00 0.00 0.00 2.01
1749 1816 6.402766 GCAATGCTACAGGTACAAACGATTTA 60.403 38.462 0.00 0.00 0.00 1.40
1750 1817 5.619086 GCAATGCTACAGGTACAAACGATTT 60.619 40.000 0.00 0.00 0.00 2.17
1751 1818 4.142687 GCAATGCTACAGGTACAAACGATT 60.143 41.667 0.00 0.00 0.00 3.34
1752 1819 3.374058 GCAATGCTACAGGTACAAACGAT 59.626 43.478 0.00 0.00 0.00 3.73
1753 1820 2.739913 GCAATGCTACAGGTACAAACGA 59.260 45.455 0.00 0.00 0.00 3.85
1754 1821 2.742053 AGCAATGCTACAGGTACAAACG 59.258 45.455 5.69 0.00 36.99 3.60
1755 1822 4.766404 AAGCAATGCTACAGGTACAAAC 57.234 40.909 8.68 0.00 38.25 2.93
1756 1823 5.106317 GCTTAAGCAATGCTACAGGTACAAA 60.106 40.000 22.59 0.00 38.25 2.83
1757 1824 4.394920 GCTTAAGCAATGCTACAGGTACAA 59.605 41.667 22.59 0.00 38.25 2.41
1758 1825 3.938963 GCTTAAGCAATGCTACAGGTACA 59.061 43.478 22.59 0.00 38.25 2.90
1759 1826 4.192317 AGCTTAAGCAATGCTACAGGTAC 58.808 43.478 28.39 0.00 45.16 3.34
1760 1827 4.442706 GAGCTTAAGCAATGCTACAGGTA 58.557 43.478 28.39 0.00 45.16 3.08
1761 1828 3.274288 GAGCTTAAGCAATGCTACAGGT 58.726 45.455 28.39 12.96 45.16 4.00
1762 1829 2.615912 GGAGCTTAAGCAATGCTACAGG 59.384 50.000 28.39 1.08 45.16 4.00
1763 1830 2.615912 GGGAGCTTAAGCAATGCTACAG 59.384 50.000 28.39 8.72 45.16 2.74
1764 1831 2.643551 GGGAGCTTAAGCAATGCTACA 58.356 47.619 28.39 0.00 45.16 2.74
1765 1832 1.950216 GGGGAGCTTAAGCAATGCTAC 59.050 52.381 28.39 8.73 45.16 3.58
1766 1833 1.846439 AGGGGAGCTTAAGCAATGCTA 59.154 47.619 28.39 0.00 45.16 3.49
1767 1834 0.627986 AGGGGAGCTTAAGCAATGCT 59.372 50.000 28.39 0.00 45.16 3.79
1768 1835 1.950216 GTAGGGGAGCTTAAGCAATGC 59.050 52.381 28.39 14.29 45.16 3.56
1769 1836 3.281727 TGTAGGGGAGCTTAAGCAATG 57.718 47.619 28.39 0.00 45.16 2.82
1770 1837 3.523564 TCTTGTAGGGGAGCTTAAGCAAT 59.476 43.478 28.39 9.69 45.16 3.56
1771 1838 2.910319 TCTTGTAGGGGAGCTTAAGCAA 59.090 45.455 28.39 10.81 45.16 3.91
1772 1839 2.546899 TCTTGTAGGGGAGCTTAAGCA 58.453 47.619 28.39 4.45 45.16 3.91
1773 1840 3.536570 CTTCTTGTAGGGGAGCTTAAGC 58.463 50.000 20.09 20.09 42.49 3.09
1774 1841 3.682999 GCCTTCTTGTAGGGGAGCTTAAG 60.683 52.174 0.00 0.00 35.74 1.85
1775 1842 2.238898 GCCTTCTTGTAGGGGAGCTTAA 59.761 50.000 0.00 0.00 35.74 1.85
1869 1942 3.822192 CCGGTCGCCATCTCGTCA 61.822 66.667 0.00 0.00 0.00 4.35
1887 1960 1.228552 GAACAGGAAGCTTGGCCCA 60.229 57.895 2.10 0.00 0.00 5.36
1963 2037 2.156917 CATGCTGCAGAAGAAGGACAA 58.843 47.619 20.43 0.00 0.00 3.18
1995 2069 2.190578 CGGAGCCCCAACATCTCC 59.809 66.667 0.00 0.00 42.19 3.71
2226 2300 4.534500 TCCTCCACTATGTAGAAGGCAAAA 59.466 41.667 0.00 0.00 0.00 2.44
2258 2332 0.690762 ACCAGCAAAGACCACCGTAT 59.309 50.000 0.00 0.00 0.00 3.06
2260 2334 1.227853 GACCAGCAAAGACCACCGT 60.228 57.895 0.00 0.00 0.00 4.83
2280 2354 2.158667 GGTTTCAGAAGGGTCAAGGACA 60.159 50.000 0.00 0.00 33.68 4.02
2286 2360 1.070134 CACTCGGTTTCAGAAGGGTCA 59.930 52.381 0.00 0.00 0.00 4.02
2339 2413 3.068873 TGGTGCCAATTAAAACGAGCTTT 59.931 39.130 0.00 0.00 0.00 3.51
2346 2420 7.284489 TGGTAGATCTATGGTGCCAATTAAAAC 59.716 37.037 5.57 0.00 0.00 2.43
2407 2495 2.845659 TCAATACACCCCATCTCCAGT 58.154 47.619 0.00 0.00 0.00 4.00
2410 2498 3.117512 ACCAATCAATACACCCCATCTCC 60.118 47.826 0.00 0.00 0.00 3.71
2418 2506 8.050778 TCATCTTAACAACCAATCAATACACC 57.949 34.615 0.00 0.00 0.00 4.16
2423 2511 7.090173 CCGTTTCATCTTAACAACCAATCAAT 58.910 34.615 0.00 0.00 0.00 2.57
2445 2533 1.003233 GATTTTCAGAGTGGGTCCCGT 59.997 52.381 2.65 0.00 0.00 5.28
2456 2544 5.060427 TCTGTTCCCCTTTGATTTTCAGA 57.940 39.130 0.00 0.00 0.00 3.27
2467 2555 2.846827 CCCTCACTAATCTGTTCCCCTT 59.153 50.000 0.00 0.00 0.00 3.95
2470 2558 4.287552 TCTACCCTCACTAATCTGTTCCC 58.712 47.826 0.00 0.00 0.00 3.97
2475 2563 5.941555 AACCTTCTACCCTCACTAATCTG 57.058 43.478 0.00 0.00 0.00 2.90
2476 2564 6.743788 ACTAACCTTCTACCCTCACTAATCT 58.256 40.000 0.00 0.00 0.00 2.40
2487 2575 6.871844 AGAATTAACGGACTAACCTTCTACC 58.128 40.000 0.00 0.00 36.31 3.18
2516 2604 6.707599 AATGCTAGACGTACAGAAAACTTC 57.292 37.500 0.00 0.00 0.00 3.01
2523 2611 7.768240 TCTATCAAAAATGCTAGACGTACAGA 58.232 34.615 0.00 0.00 0.00 3.41
2524 2612 7.987268 TCTATCAAAAATGCTAGACGTACAG 57.013 36.000 0.00 0.00 0.00 2.74
2525 2613 8.414003 AGATCTATCAAAAATGCTAGACGTACA 58.586 33.333 0.00 0.00 0.00 2.90
2568 2656 9.924650 ATAGTTGTCTTGTCTAAAGTAAACGAT 57.075 29.630 0.00 0.00 0.00 3.73
2604 2692 7.048629 AGAGCATGACCATATATCCGAATAG 57.951 40.000 0.00 0.00 0.00 1.73
2623 2711 7.495135 TGCGAATATTATGATGAAAAGAGCA 57.505 32.000 0.00 0.00 0.00 4.26
2753 2842 4.080356 TGGTGGGTGGAGAGAATTAAGATG 60.080 45.833 0.00 0.00 0.00 2.90
2759 2848 1.747444 AGTGGTGGGTGGAGAGAATT 58.253 50.000 0.00 0.00 0.00 2.17
2771 2860 0.533951 GGTTAGTCCGGTAGTGGTGG 59.466 60.000 0.00 0.00 0.00 4.61
2775 2864 2.205691 GGGGGTTAGTCCGGTAGTG 58.794 63.158 0.00 0.00 37.00 2.74
2776 2865 4.794235 GGGGGTTAGTCCGGTAGT 57.206 61.111 0.00 0.00 37.00 2.73
2799 2888 1.957562 CATAGACCTAGGCCGACGG 59.042 63.158 10.29 10.29 0.00 4.79
2800 2889 1.286260 GCATAGACCTAGGCCGACG 59.714 63.158 9.30 0.00 36.92 5.12
2805 2894 0.249911 CCGTTGGCATAGACCTAGGC 60.250 60.000 9.30 5.23 41.60 3.93
2806 2895 1.120530 ACCGTTGGCATAGACCTAGG 58.879 55.000 7.41 7.41 0.00 3.02
2807 2896 1.202533 CCACCGTTGGCATAGACCTAG 60.203 57.143 0.00 0.00 35.56 3.02
2808 2897 0.828022 CCACCGTTGGCATAGACCTA 59.172 55.000 0.00 0.00 35.56 3.08
2809 2898 1.602237 CCACCGTTGGCATAGACCT 59.398 57.895 0.00 0.00 35.56 3.85
2810 2899 4.218722 CCACCGTTGGCATAGACC 57.781 61.111 0.00 0.00 35.56 3.85
2827 2916 0.318445 ATGTTATCTACGCCGACGGC 60.318 55.000 29.10 29.10 46.75 5.68
2828 2917 1.002142 TGATGTTATCTACGCCGACGG 60.002 52.381 10.29 10.29 46.04 4.79
2836 2925 7.539710 TGACACAAGTACGTTGATGTTATCTAC 59.460 37.037 0.00 0.00 38.60 2.59
2837 2926 7.595604 TGACACAAGTACGTTGATGTTATCTA 58.404 34.615 0.00 0.00 38.60 1.98
2838 2927 6.452242 TGACACAAGTACGTTGATGTTATCT 58.548 36.000 0.00 0.00 38.60 1.98
2839 2928 6.699895 TGACACAAGTACGTTGATGTTATC 57.300 37.500 0.00 0.00 38.60 1.75
2840 2929 7.349711 GTTTGACACAAGTACGTTGATGTTAT 58.650 34.615 0.00 0.00 38.60 1.89
2841 2930 6.238157 GGTTTGACACAAGTACGTTGATGTTA 60.238 38.462 0.00 6.61 38.60 2.41
2842 2931 5.448089 GGTTTGACACAAGTACGTTGATGTT 60.448 40.000 0.00 0.00 38.60 2.71
2843 2932 4.034742 GGTTTGACACAAGTACGTTGATGT 59.965 41.667 0.00 10.38 38.60 3.06
2844 2933 4.523813 GGTTTGACACAAGTACGTTGATG 58.476 43.478 0.00 0.00 38.60 3.07
2845 2934 3.246699 CGGTTTGACACAAGTACGTTGAT 59.753 43.478 0.00 1.22 38.60 2.57
2846 2935 2.604011 CGGTTTGACACAAGTACGTTGA 59.396 45.455 0.00 0.00 38.60 3.18
2847 2936 2.349275 ACGGTTTGACACAAGTACGTTG 59.651 45.455 0.00 0.00 42.48 4.10
2848 2937 2.604462 GACGGTTTGACACAAGTACGTT 59.396 45.455 0.00 0.00 33.09 3.99
2849 2938 2.195922 GACGGTTTGACACAAGTACGT 58.804 47.619 0.00 0.00 35.89 3.57
2850 2939 1.188573 CGACGGTTTGACACAAGTACG 59.811 52.381 0.00 0.00 0.00 3.67
2851 2940 1.523934 CCGACGGTTTGACACAAGTAC 59.476 52.381 5.48 0.00 0.00 2.73
2852 2941 1.855513 CCGACGGTTTGACACAAGTA 58.144 50.000 5.48 0.00 0.00 2.24
2853 2942 1.433837 GCCGACGGTTTGACACAAGT 61.434 55.000 16.73 0.00 0.00 3.16
2854 2943 1.278637 GCCGACGGTTTGACACAAG 59.721 57.895 16.73 0.00 0.00 3.16
2855 2944 0.816018 ATGCCGACGGTTTGACACAA 60.816 50.000 16.73 0.00 0.00 3.33
2856 2945 0.033642 TATGCCGACGGTTTGACACA 59.966 50.000 16.73 2.95 0.00 3.72
2857 2946 0.719465 CTATGCCGACGGTTTGACAC 59.281 55.000 16.73 0.00 0.00 3.67
2858 2947 0.390603 CCTATGCCGACGGTTTGACA 60.391 55.000 16.73 4.55 0.00 3.58
2859 2948 1.702491 GCCTATGCCGACGGTTTGAC 61.702 60.000 16.73 0.00 0.00 3.18
2860 2949 1.448893 GCCTATGCCGACGGTTTGA 60.449 57.895 16.73 0.00 0.00 2.69
2861 2950 1.095228 ATGCCTATGCCGACGGTTTG 61.095 55.000 16.73 4.72 36.33 2.93
2862 2951 0.466543 TATGCCTATGCCGACGGTTT 59.533 50.000 16.73 5.84 36.33 3.27
2863 2952 0.685097 ATATGCCTATGCCGACGGTT 59.315 50.000 16.73 6.23 36.33 4.44
2864 2953 1.552578 TATATGCCTATGCCGACGGT 58.447 50.000 16.73 0.00 36.33 4.83
2865 2954 2.473816 CATATATGCCTATGCCGACGG 58.526 52.381 10.29 10.29 36.33 4.79
2878 2967 2.185262 CGGATGTCGTCGGCATATATG 58.815 52.381 13.19 8.45 0.00 1.78
2879 2968 2.561733 CGGATGTCGTCGGCATATAT 57.438 50.000 13.19 0.00 0.00 0.86
2881 2970 4.966005 CGGATGTCGTCGGCATAT 57.034 55.556 13.19 0.00 0.00 1.78
2890 2979 1.297158 GACGGACGTACGGATGTCG 60.297 63.158 26.32 16.32 41.80 4.35
2891 2980 0.247974 CTGACGGACGTACGGATGTC 60.248 60.000 26.32 21.35 40.39 3.06
2892 2981 1.798735 CTGACGGACGTACGGATGT 59.201 57.895 26.32 13.89 38.39 3.06
2893 2982 1.585521 GCTGACGGACGTACGGATG 60.586 63.158 26.32 14.20 38.39 3.51
2894 2983 1.381928 ATGCTGACGGACGTACGGAT 61.382 55.000 26.32 3.47 38.39 4.18
2895 2984 0.744057 TATGCTGACGGACGTACGGA 60.744 55.000 26.32 9.70 38.39 4.69
2896 2985 0.316772 CTATGCTGACGGACGTACGG 60.317 60.000 26.32 7.94 38.39 4.02
2897 2986 0.654160 TCTATGCTGACGGACGTACG 59.346 55.000 20.85 20.85 40.31 3.67
2898 2987 3.249320 TGTATCTATGCTGACGGACGTAC 59.751 47.826 0.00 0.00 0.00 3.67
2899 2988 3.249320 GTGTATCTATGCTGACGGACGTA 59.751 47.826 0.00 0.00 0.00 3.57
2900 2989 2.033049 GTGTATCTATGCTGACGGACGT 59.967 50.000 0.00 0.00 0.00 4.34
2901 2990 2.604855 GGTGTATCTATGCTGACGGACG 60.605 54.545 0.00 0.00 0.00 4.79
2902 2991 2.604855 CGGTGTATCTATGCTGACGGAC 60.605 54.545 0.00 0.00 0.00 4.79
2903 2992 1.607148 CGGTGTATCTATGCTGACGGA 59.393 52.381 0.00 0.00 0.00 4.69
2904 2993 1.337071 ACGGTGTATCTATGCTGACGG 59.663 52.381 0.00 0.00 0.00 4.79
2905 2994 2.651701 GACGGTGTATCTATGCTGACG 58.348 52.381 0.00 0.00 0.00 4.35
2906 2995 2.604855 CCGACGGTGTATCTATGCTGAC 60.605 54.545 5.48 0.00 0.00 3.51
2907 2996 1.607148 CCGACGGTGTATCTATGCTGA 59.393 52.381 5.48 0.00 0.00 4.26
2908 2997 1.930817 GCCGACGGTGTATCTATGCTG 60.931 57.143 16.73 0.00 0.00 4.41
2909 2998 0.314302 GCCGACGGTGTATCTATGCT 59.686 55.000 16.73 0.00 0.00 3.79
2910 2999 0.031585 TGCCGACGGTGTATCTATGC 59.968 55.000 16.73 0.00 0.00 3.14
2911 3000 1.607148 TCTGCCGACGGTGTATCTATG 59.393 52.381 16.73 0.00 0.00 2.23
2912 3001 1.880675 CTCTGCCGACGGTGTATCTAT 59.119 52.381 16.73 0.00 0.00 1.98
2913 3002 1.134310 TCTCTGCCGACGGTGTATCTA 60.134 52.381 16.73 0.00 0.00 1.98
2914 3003 0.393944 TCTCTGCCGACGGTGTATCT 60.394 55.000 16.73 0.00 0.00 1.98
2915 3004 0.669077 ATCTCTGCCGACGGTGTATC 59.331 55.000 16.73 0.00 0.00 2.24
2916 3005 1.112113 AATCTCTGCCGACGGTGTAT 58.888 50.000 16.73 5.09 0.00 2.29
2917 3006 1.753930 TAATCTCTGCCGACGGTGTA 58.246 50.000 16.73 1.54 0.00 2.90
2918 3007 1.067212 GATAATCTCTGCCGACGGTGT 59.933 52.381 16.73 0.00 0.00 4.16
2919 3008 1.067060 TGATAATCTCTGCCGACGGTG 59.933 52.381 16.73 9.16 0.00 4.94
2920 3009 1.067212 GTGATAATCTCTGCCGACGGT 59.933 52.381 16.73 0.00 0.00 4.83
2921 3010 1.603172 GGTGATAATCTCTGCCGACGG 60.603 57.143 10.29 10.29 0.00 4.79
2922 3011 1.067060 TGGTGATAATCTCTGCCGACG 59.933 52.381 0.00 0.00 0.00 5.12
2923 3012 2.362397 TCTGGTGATAATCTCTGCCGAC 59.638 50.000 0.00 0.00 0.00 4.79
2924 3013 2.362397 GTCTGGTGATAATCTCTGCCGA 59.638 50.000 0.00 0.00 0.00 5.54
2925 3014 2.101415 TGTCTGGTGATAATCTCTGCCG 59.899 50.000 0.00 0.00 0.00 5.69
2926 3015 3.726607 CTGTCTGGTGATAATCTCTGCC 58.273 50.000 0.00 0.00 0.00 4.85
2927 3016 3.129871 GCTGTCTGGTGATAATCTCTGC 58.870 50.000 0.00 0.00 0.00 4.26
2928 3017 3.379240 CGCTGTCTGGTGATAATCTCTG 58.621 50.000 0.00 0.00 0.00 3.35
2929 3018 2.223923 GCGCTGTCTGGTGATAATCTCT 60.224 50.000 0.00 0.00 0.00 3.10
2930 3019 2.131183 GCGCTGTCTGGTGATAATCTC 58.869 52.381 0.00 0.00 0.00 2.75
2931 3020 1.202580 GGCGCTGTCTGGTGATAATCT 60.203 52.381 7.64 0.00 0.00 2.40
2932 3021 1.221414 GGCGCTGTCTGGTGATAATC 58.779 55.000 7.64 0.00 0.00 1.75
2933 3022 0.541392 TGGCGCTGTCTGGTGATAAT 59.459 50.000 7.64 0.00 0.00 1.28
2934 3023 0.541392 ATGGCGCTGTCTGGTGATAA 59.459 50.000 7.64 0.00 0.00 1.75
2935 3024 0.104855 GATGGCGCTGTCTGGTGATA 59.895 55.000 7.64 0.00 0.00 2.15
2936 3025 1.153289 GATGGCGCTGTCTGGTGAT 60.153 57.895 7.64 0.00 0.00 3.06
2937 3026 2.265739 GATGGCGCTGTCTGGTGA 59.734 61.111 7.64 0.00 0.00 4.02
2938 3027 2.046988 TGATGGCGCTGTCTGGTG 60.047 61.111 7.64 0.00 0.00 4.17
2939 3028 2.046892 GTGATGGCGCTGTCTGGT 60.047 61.111 7.64 0.00 0.00 4.00
2940 3029 2.046988 TGTGATGGCGCTGTCTGG 60.047 61.111 7.64 0.00 0.00 3.86
2941 3030 1.668793 TGTGTGATGGCGCTGTCTG 60.669 57.895 7.64 0.00 0.00 3.51
2942 3031 1.669115 GTGTGTGATGGCGCTGTCT 60.669 57.895 7.64 0.00 0.00 3.41
2943 3032 2.863153 GTGTGTGATGGCGCTGTC 59.137 61.111 7.64 6.48 0.00 3.51
2944 3033 3.043713 CGTGTGTGATGGCGCTGT 61.044 61.111 7.64 0.00 0.00 4.40
2945 3034 4.450122 GCGTGTGTGATGGCGCTG 62.450 66.667 7.64 0.00 45.48 5.18
2948 3037 2.738139 TCAGCGTGTGTGATGGCG 60.738 61.111 0.00 0.00 0.00 5.69
2949 3038 2.680913 GGTCAGCGTGTGTGATGGC 61.681 63.158 0.00 0.00 0.00 4.40
2950 3039 1.293963 CTGGTCAGCGTGTGTGATGG 61.294 60.000 0.00 0.00 0.00 3.51
2951 3040 1.293963 CCTGGTCAGCGTGTGTGATG 61.294 60.000 0.00 0.00 0.00 3.07
2952 3041 1.004560 CCTGGTCAGCGTGTGTGAT 60.005 57.895 0.00 0.00 0.00 3.06
2953 3042 2.421314 CCTGGTCAGCGTGTGTGA 59.579 61.111 0.00 0.00 0.00 3.58
2954 3043 3.349006 GCCTGGTCAGCGTGTGTG 61.349 66.667 0.00 0.00 0.00 3.82
2955 3044 4.626081 GGCCTGGTCAGCGTGTGT 62.626 66.667 0.00 0.00 0.00 3.72
2971 3060 2.890474 GCACAGGTATGCCGACGG 60.890 66.667 10.29 10.29 39.86 4.79
2977 3066 2.109431 CCATGTGGCACAGGTATGC 58.891 57.895 27.95 0.00 41.80 3.14
2988 3077 3.136123 CCAAGGAGCGCCATGTGG 61.136 66.667 9.88 9.35 36.29 4.17
2989 3078 1.526575 AAACCAAGGAGCGCCATGTG 61.527 55.000 9.88 3.47 36.29 3.21
2990 3079 1.228552 AAACCAAGGAGCGCCATGT 60.229 52.632 9.88 0.00 36.29 3.21
2991 3080 0.962356 AGAAACCAAGGAGCGCCATG 60.962 55.000 9.88 7.06 36.29 3.66
2992 3081 0.678048 GAGAAACCAAGGAGCGCCAT 60.678 55.000 9.88 0.00 36.29 4.40
2993 3082 1.302511 GAGAAACCAAGGAGCGCCA 60.303 57.895 9.88 0.00 36.29 5.69
2994 3083 2.041115 GGAGAAACCAAGGAGCGCC 61.041 63.158 2.29 0.00 38.79 6.53
2995 3084 1.003233 AGGAGAAACCAAGGAGCGC 60.003 57.895 0.00 0.00 42.04 5.92
2996 3085 0.674895 CCAGGAGAAACCAAGGAGCG 60.675 60.000 0.00 0.00 42.04 5.03
2997 3086 0.693049 TCCAGGAGAAACCAAGGAGC 59.307 55.000 0.00 0.00 39.20 4.70
2998 3087 1.699634 TGTCCAGGAGAAACCAAGGAG 59.300 52.381 0.00 0.00 42.73 3.69
2999 3088 1.814429 TGTCCAGGAGAAACCAAGGA 58.186 50.000 0.00 0.00 40.89 3.36
3000 3089 2.440409 CATGTCCAGGAGAAACCAAGG 58.560 52.381 0.00 0.00 42.04 3.61
3001 3090 2.440409 CCATGTCCAGGAGAAACCAAG 58.560 52.381 0.00 0.00 42.04 3.61
3002 3091 1.547675 GCCATGTCCAGGAGAAACCAA 60.548 52.381 0.00 0.00 42.04 3.67
3003 3092 0.038166 GCCATGTCCAGGAGAAACCA 59.962 55.000 0.00 0.00 42.04 3.67
3004 3093 0.329596 AGCCATGTCCAGGAGAAACC 59.670 55.000 0.00 0.00 39.35 3.27
3005 3094 3.209410 CATAGCCATGTCCAGGAGAAAC 58.791 50.000 0.00 0.00 0.00 2.78
3006 3095 2.846206 ACATAGCCATGTCCAGGAGAAA 59.154 45.455 0.00 0.00 41.75 2.52
3007 3096 2.481441 ACATAGCCATGTCCAGGAGAA 58.519 47.619 0.00 0.00 41.75 2.87
3008 3097 2.180946 ACATAGCCATGTCCAGGAGA 57.819 50.000 0.00 0.00 41.75 3.71
3017 3106 1.302033 GGCCCTCGACATAGCCATG 60.302 63.158 0.00 0.00 45.07 3.66
3018 3107 3.151906 GGCCCTCGACATAGCCAT 58.848 61.111 0.00 0.00 45.07 4.40
3020 3109 2.423446 CTGGCCCTCGACATAGCC 59.577 66.667 0.00 3.83 45.96 3.93
3021 3110 2.423446 CCTGGCCCTCGACATAGC 59.577 66.667 0.00 0.00 0.00 2.97
3022 3111 2.423446 GCCTGGCCCTCGACATAG 59.577 66.667 7.66 0.00 0.00 2.23
3023 3112 3.161450 GGCCTGGCCCTCGACATA 61.161 66.667 27.77 0.00 44.06 2.29
3039 3128 0.881796 TGCTAGATCTATGCCGACGG 59.118 55.000 10.29 10.29 0.00 4.79
3040 3129 1.726251 CGTGCTAGATCTATGCCGACG 60.726 57.143 16.59 16.03 0.00 5.12
3041 3130 1.401670 CCGTGCTAGATCTATGCCGAC 60.402 57.143 21.66 14.28 0.00 4.79
3042 3131 0.881796 CCGTGCTAGATCTATGCCGA 59.118 55.000 21.66 7.68 0.00 5.54
3043 3132 0.598562 ACCGTGCTAGATCTATGCCG 59.401 55.000 16.59 17.14 0.00 5.69
3044 3133 1.341531 ACACCGTGCTAGATCTATGCC 59.658 52.381 16.59 10.04 0.00 4.40
3045 3134 2.034685 TGACACCGTGCTAGATCTATGC 59.965 50.000 2.11 9.65 0.00 3.14
3046 3135 3.990318 TGACACCGTGCTAGATCTATG 57.010 47.619 2.11 0.01 0.00 2.23
3047 3136 4.022762 GTGATGACACCGTGCTAGATCTAT 60.023 45.833 2.11 0.00 40.74 1.98
3048 3137 3.315470 GTGATGACACCGTGCTAGATCTA 59.685 47.826 1.69 1.69 40.74 1.98
3049 3138 2.099921 GTGATGACACCGTGCTAGATCT 59.900 50.000 0.00 0.00 40.74 2.75
3050 3139 2.159240 TGTGATGACACCGTGCTAGATC 60.159 50.000 0.00 0.00 45.40 2.75
3051 3140 1.824852 TGTGATGACACCGTGCTAGAT 59.175 47.619 0.00 0.00 45.40 1.98
3052 3141 1.202348 CTGTGATGACACCGTGCTAGA 59.798 52.381 0.00 0.00 45.40 2.43
3053 3142 1.633561 CTGTGATGACACCGTGCTAG 58.366 55.000 0.00 0.00 45.40 3.42
3054 3143 0.246360 CCTGTGATGACACCGTGCTA 59.754 55.000 0.00 0.00 45.40 3.49
3146 3737 3.243569 CCCAAATACTAGCTCGGAGACAG 60.244 52.174 9.69 6.95 0.00 3.51
3147 3738 2.693591 CCCAAATACTAGCTCGGAGACA 59.306 50.000 9.69 0.00 0.00 3.41
3164 3755 4.028131 ACATGTTACCTCTCGATACCCAA 58.972 43.478 0.00 0.00 0.00 4.12
3179 3770 2.094803 CCTGCGCAAATTGGACATGTTA 60.095 45.455 13.05 0.00 0.00 2.41
3183 3774 1.203052 CTTCCTGCGCAAATTGGACAT 59.797 47.619 15.06 0.00 0.00 3.06
3189 3780 4.972591 GCACTTCCTGCGCAAATT 57.027 50.000 13.05 0.00 35.72 1.82
3208 3799 1.523758 GCCAACGGAGAAACATGACT 58.476 50.000 0.00 0.00 0.00 3.41
3212 3803 0.673644 CGAGGCCAACGGAGAAACAT 60.674 55.000 5.01 0.00 0.00 2.71
3217 3808 1.005394 GTTTCGAGGCCAACGGAGA 60.005 57.895 19.20 6.30 0.00 3.71
3222 3813 0.790814 CGAGAAGTTTCGAGGCCAAC 59.209 55.000 5.01 0.00 43.03 3.77
3270 3861 2.968156 GCGTTACACCGTGGCACA 60.968 61.111 19.09 0.00 0.00 4.57
3280 3871 1.070105 GTGTGTCCAGGGCGTTACA 59.930 57.895 0.00 0.00 0.00 2.41
3281 3872 1.670083 GGTGTGTCCAGGGCGTTAC 60.670 63.158 0.00 0.00 35.97 2.50
3282 3873 2.745037 GGTGTGTCCAGGGCGTTA 59.255 61.111 0.00 0.00 35.97 3.18
3283 3874 4.265056 GGGTGTGTCCAGGGCGTT 62.265 66.667 0.00 0.00 38.11 4.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.