Multiple sequence alignment - TraesCS5A01G409000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G409000 chr5A 100.000 4164 0 0 1 4164 598863436 598867599 0.000000e+00 7690
1 TraesCS5A01G409000 chr5D 93.226 2923 109 36 1 2869 480363279 480366166 0.000000e+00 4218
2 TraesCS5A01G409000 chr5D 92.070 454 24 7 2895 3346 480366164 480366607 2.730000e-176 628
3 TraesCS5A01G409000 chr5D 85.965 399 32 15 3330 3725 480366625 480367002 5.010000e-109 405
4 TraesCS5A01G409000 chr5D 89.372 207 19 3 1876 2079 12008713 12008919 1.490000e-64 257
5 TraesCS5A01G409000 chr5D 86.765 204 24 3 1879 2079 235711500 235711297 1.510000e-54 224
6 TraesCS5A01G409000 chr5B 92.380 1378 50 18 1 1356 588512360 588513704 0.000000e+00 1912
7 TraesCS5A01G409000 chr5B 77.863 2227 272 119 1652 3742 588514011 588516152 0.000000e+00 1177
8 TraesCS5A01G409000 chr3D 81.556 450 60 13 1643 2079 564093716 564094155 2.380000e-92 350
9 TraesCS5A01G409000 chr3D 79.121 455 62 20 1643 2079 23498233 23498672 2.450000e-72 283
10 TraesCS5A01G409000 chr3D 81.437 167 20 6 1221 1376 23497806 23497972 4.370000e-25 126
11 TraesCS5A01G409000 chr1A 80.444 450 65 14 1643 2079 428883237 428883676 5.190000e-84 322
12 TraesCS5A01G409000 chr7B 80.222 450 66 14 1643 2079 615632698 615632259 2.420000e-82 316
13 TraesCS5A01G409000 chr7B 84.229 279 17 16 1034 1308 116070685 116070940 3.220000e-61 246
14 TraesCS5A01G409000 chr4D 80.222 450 66 16 1643 2079 435252864 435253303 2.420000e-82 316
15 TraesCS5A01G409000 chr4D 80.226 354 35 19 1035 1376 435252279 435252609 2.500000e-57 233
16 TraesCS5A01G409000 chr4D 79.263 217 18 15 1096 1308 361189209 361189402 4.370000e-25 126
17 TraesCS5A01G409000 chr6A 81.127 355 32 19 1034 1376 29401758 29402089 6.910000e-63 252
18 TraesCS5A01G409000 chr3B 83.513 279 19 17 1034 1308 711740561 711740306 6.960000e-58 235
19 TraesCS5A01G409000 chr6B 83.154 279 20 16 1034 1308 720151232 720150977 3.240000e-56 230
20 TraesCS5A01G409000 chr7A 81.362 279 25 16 1034 1308 440950393 440950648 7.060000e-48 202
21 TraesCS5A01G409000 chr2B 80.347 173 23 5 1221 1382 169269046 169268874 2.030000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G409000 chr5A 598863436 598867599 4163 False 7690.000000 7690 100.000000 1 4164 1 chr5A.!!$F1 4163
1 TraesCS5A01G409000 chr5D 480363279 480367002 3723 False 1750.333333 4218 90.420333 1 3725 3 chr5D.!!$F2 3724
2 TraesCS5A01G409000 chr5B 588512360 588516152 3792 False 1544.500000 1912 85.121500 1 3742 2 chr5B.!!$F1 3741
3 TraesCS5A01G409000 chr3D 23497806 23498672 866 False 204.500000 283 80.279000 1221 2079 2 chr3D.!!$F2 858
4 TraesCS5A01G409000 chr4D 435252279 435253303 1024 False 274.500000 316 80.224000 1035 2079 2 chr4D.!!$F2 1044

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
153 154 0.321564 CCGGCATCCTCTCAAACACA 60.322 55.000 0.00 0.00 0.00 3.72 F
1349 1421 0.109412 AGTACGTACGCCTGCAAGAC 60.109 55.000 19.49 0.97 34.07 3.01 F
1489 1602 1.001406 GCTACTCTTGCAGTGTCCTGT 59.999 52.381 0.00 0.00 41.02 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1762 1934 0.248289 CCAAATCCCAAGCAGCAAGG 59.752 55.0 0.00 0.0 0.0 3.61 R
3061 3313 0.319900 TCTCCTTGTCGTTCAGCTGC 60.320 55.0 9.47 0.0 0.0 5.25 R
3393 3704 1.667236 TAGGACCAAATCATGCTGCG 58.333 50.0 0.00 0.0 0.0 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.080093 GACCGCGTTCCATGAGACA 60.080 57.895 4.92 0.00 0.00 3.41
153 154 0.321564 CCGGCATCCTCTCAAACACA 60.322 55.000 0.00 0.00 0.00 3.72
309 310 2.300787 GCACGACGAGAGCACGTTT 61.301 57.895 0.00 0.00 46.52 3.60
455 456 2.485122 GGGCATTTCCGCGAACAG 59.515 61.111 8.23 0.00 34.94 3.16
921 953 2.154854 TTTGTCCTCTTGTCGCTCTG 57.845 50.000 0.00 0.00 0.00 3.35
928 960 0.799393 TCTTGTCGCTCTGTCTCTCG 59.201 55.000 0.00 0.00 0.00 4.04
1206 1267 1.292541 GACGGGGGAACTGACTGAC 59.707 63.158 0.00 0.00 0.00 3.51
1214 1275 1.569479 GAACTGACTGACTTGGGCGC 61.569 60.000 0.00 0.00 0.00 6.53
1215 1276 3.114616 CTGACTGACTTGGGCGCG 61.115 66.667 0.00 0.00 0.00 6.86
1216 1277 3.865929 CTGACTGACTTGGGCGCGT 62.866 63.158 8.43 0.00 0.00 6.01
1217 1278 3.414700 GACTGACTTGGGCGCGTG 61.415 66.667 8.43 0.00 0.00 5.34
1338 1410 0.526954 CGGCCACATCCAGTACGTAC 60.527 60.000 18.10 18.10 0.00 3.67
1349 1421 0.109412 AGTACGTACGCCTGCAAGAC 60.109 55.000 19.49 0.97 34.07 3.01
1423 1503 1.624753 GGGCTGGGACTAGGAGGTA 59.375 63.158 0.00 0.00 0.00 3.08
1426 1506 1.498145 GGCTGGGACTAGGAGGTACTA 59.502 57.143 0.00 0.00 41.55 1.82
1436 1516 5.293319 CTAGGAGGTACTAGTAGCACTCA 57.707 47.826 28.68 15.49 41.55 3.41
1449 1529 5.865085 AGTAGCACTCAGTGTTAATTTCCA 58.135 37.500 6.68 0.00 35.75 3.53
1476 1576 7.472334 AATTTCCAATGTTCATTGCTACTCT 57.528 32.000 17.04 1.09 0.00 3.24
1489 1602 1.001406 GCTACTCTTGCAGTGTCCTGT 59.999 52.381 0.00 0.00 41.02 4.00
1491 1604 3.674682 GCTACTCTTGCAGTGTCCTGTAG 60.675 52.174 0.00 0.00 41.02 2.74
1493 1606 3.497332 ACTCTTGCAGTGTCCTGTAGTA 58.503 45.455 0.00 0.00 41.02 1.82
1494 1607 3.256136 ACTCTTGCAGTGTCCTGTAGTAC 59.744 47.826 0.00 0.00 41.02 2.73
1496 1609 4.659115 TCTTGCAGTGTCCTGTAGTACTA 58.341 43.478 0.00 0.00 41.02 1.82
1497 1610 4.700692 TCTTGCAGTGTCCTGTAGTACTAG 59.299 45.833 1.87 0.00 41.02 2.57
1498 1611 4.030314 TGCAGTGTCCTGTAGTACTAGT 57.970 45.455 1.87 0.00 41.02 2.57
1499 1612 4.404640 TGCAGTGTCCTGTAGTACTAGTT 58.595 43.478 1.87 0.00 41.02 2.24
1507 1659 8.127954 GTGTCCTGTAGTACTAGTTGTATTAGC 58.872 40.741 1.87 0.00 33.23 3.09
1733 1905 5.119125 GCGCTCACTGCTTTTTATCAAAAAT 59.881 36.000 0.00 0.00 39.43 1.82
1812 1985 8.200792 CCACTAGGTTGCTCATCCTTATATATC 58.799 40.741 4.96 0.00 35.51 1.63
1859 2034 3.601356 CGAGCTTCAGAATGCATTTACG 58.399 45.455 14.33 5.41 34.76 3.18
1894 2081 4.859304 ACATCCTCGTTGTACAGTACAA 57.141 40.909 20.32 20.32 45.66 2.41
2092 2281 2.887783 TGCAAAACTTTCCTCCGCATTA 59.112 40.909 0.00 0.00 0.00 1.90
2132 2321 7.282585 TGTTTCTATATGGATCCCTTTCTGTG 58.717 38.462 9.90 0.00 0.00 3.66
2139 2328 3.330405 TGGATCCCTTTCTGTGTTCATCA 59.670 43.478 9.90 0.00 0.00 3.07
2226 2415 2.160205 CCATCAGCAGCCATTATCCAG 58.840 52.381 0.00 0.00 0.00 3.86
2249 2438 6.306356 CAGTGTTTTAGAGTTTACATGCATGC 59.694 38.462 26.53 11.82 0.00 4.06
2256 2445 8.504812 TTAGAGTTTACATGCATGCTCAATTA 57.495 30.769 26.53 7.46 0.00 1.40
2257 2446 7.024340 AGAGTTTACATGCATGCTCAATTAG 57.976 36.000 26.53 0.00 0.00 1.73
2319 2508 4.694760 TGGGATAGATGGAATGTCACAG 57.305 45.455 0.00 0.00 0.00 3.66
2376 2566 4.019792 TCAAGACACTTGCCACACATAT 57.980 40.909 6.62 0.00 0.00 1.78
2377 2567 5.159273 TCAAGACACTTGCCACACATATA 57.841 39.130 6.62 0.00 0.00 0.86
2378 2568 4.935205 TCAAGACACTTGCCACACATATAC 59.065 41.667 6.62 0.00 0.00 1.47
2497 2695 9.902196 GTAGAAACTCCTACAATCTATAAGAGC 57.098 37.037 0.00 0.00 38.99 4.09
2499 2697 5.379732 ACTCCTACAATCTATAAGAGCGC 57.620 43.478 0.00 0.00 0.00 5.92
2501 2699 5.182380 ACTCCTACAATCTATAAGAGCGCTC 59.818 44.000 30.01 30.01 0.00 5.03
2531 2729 3.914771 ACTGAACCATTTATGATGGGGG 58.085 45.455 12.83 0.00 43.32 5.40
2553 2752 3.198853 GGTTTATCTGCCTCAGAGGAACT 59.801 47.826 21.89 0.03 44.08 3.01
2634 2834 4.764172 ACAAGTTATCTGCTCAGATGGTC 58.236 43.478 19.55 10.91 46.80 4.02
2776 3013 5.470098 TGACTCCTTTCTTTCTTGTGTATGC 59.530 40.000 0.00 0.00 0.00 3.14
2848 3085 2.560981 TCAGGTGCGTAAGATGACAGAA 59.439 45.455 0.00 0.00 43.02 3.02
2849 3086 2.926200 CAGGTGCGTAAGATGACAGAAG 59.074 50.000 0.00 0.00 43.02 2.85
2850 3087 2.826128 AGGTGCGTAAGATGACAGAAGA 59.174 45.455 0.00 0.00 43.02 2.87
2875 3113 4.507710 TCTAACTCATGGCTAAGCTTGTG 58.492 43.478 9.86 2.92 0.00 3.33
2876 3114 2.867109 ACTCATGGCTAAGCTTGTGT 57.133 45.000 9.86 0.00 0.00 3.72
2879 3117 2.676839 CTCATGGCTAAGCTTGTGTCTG 59.323 50.000 9.86 1.61 0.00 3.51
2883 3121 2.158827 TGGCTAAGCTTGTGTCTGTCAA 60.159 45.455 9.86 0.00 0.00 3.18
2887 3125 4.142945 GCTAAGCTTGTGTCTGTCAATCTG 60.143 45.833 9.86 0.00 0.00 2.90
2919 3167 4.262808 GCTCATCACAGGGCAGTATTATCT 60.263 45.833 0.00 0.00 0.00 1.98
2922 3170 5.838521 TCATCACAGGGCAGTATTATCTGTA 59.161 40.000 0.00 0.00 36.98 2.74
2952 3200 3.934579 CCAATGCATCCCTTTTACTTTGC 59.065 43.478 0.00 0.00 0.00 3.68
3021 3269 5.303747 TGTGTTTGAACAGTGGTACTTTG 57.696 39.130 0.00 0.00 40.05 2.77
3029 3277 6.225318 TGAACAGTGGTACTTTGGTATGTAC 58.775 40.000 0.00 0.00 38.52 2.90
3050 3302 3.120338 ACGACGTTAACATGCTGAATTGG 60.120 43.478 6.39 0.00 0.00 3.16
3061 3313 4.241590 TGCTGAATTGGCAGTAAACAAG 57.758 40.909 0.00 0.00 38.17 3.16
3148 3400 2.211806 GATTGCCTCTGCTCAGATCAC 58.788 52.381 0.00 0.00 36.76 3.06
3149 3401 1.273759 TTGCCTCTGCTCAGATCACT 58.726 50.000 0.00 0.00 36.76 3.41
3247 3512 4.584638 TTGCCCAATACTGTACCTGATT 57.415 40.909 0.00 0.00 0.00 2.57
3297 3562 4.439305 TGTATGTGCCATTCTTTTCTGC 57.561 40.909 0.00 0.00 0.00 4.26
3312 3577 6.106673 TCTTTTCTGCTAGTTGTATGCTACC 58.893 40.000 0.00 0.00 0.00 3.18
3328 3595 3.243724 GCTACCACTCCCTGGAATATCT 58.756 50.000 0.00 0.00 43.95 1.98
3336 3603 1.891150 CCCTGGAATATCTGCAATGCC 59.109 52.381 1.53 0.00 0.00 4.40
3354 3653 1.986698 CCTTTTTCTTCATGCCTGCG 58.013 50.000 0.00 0.00 0.00 5.18
3361 3661 1.482182 TCTTCATGCCTGCGTATGACT 59.518 47.619 0.00 0.00 40.35 3.41
3393 3704 5.695424 AAGTAGGAGGGGAATAGTTTGTC 57.305 43.478 0.00 0.00 0.00 3.18
3427 3742 5.431179 TGGTCCTATTTTACTGGTTCTCC 57.569 43.478 0.00 0.00 0.00 3.71
3442 3757 6.098409 ACTGGTTCTCCGTTGATTATCAGTAT 59.902 38.462 0.00 0.00 36.30 2.12
3443 3758 7.287005 ACTGGTTCTCCGTTGATTATCAGTATA 59.713 37.037 0.00 0.00 36.30 1.47
3489 3807 5.126061 AGGATTTACAAGTGGAATGTGATGC 59.874 40.000 0.00 0.00 32.27 3.91
3492 3810 0.521867 CAAGTGGAATGTGATGCGCG 60.522 55.000 0.00 0.00 0.00 6.86
3506 3824 3.834373 CGCGGTTAAGTCGTGCCG 61.834 66.667 0.00 0.00 46.17 5.69
3508 3826 3.484547 CGGTTAAGTCGTGCCGCC 61.485 66.667 0.00 0.00 37.69 6.13
3539 3857 6.030228 GCTTTGGTTGTGATTACTGATTAGC 58.970 40.000 0.00 0.00 0.00 3.09
3552 3870 5.086598 ACTGATTAGCCTCTCCCTTATCT 57.913 43.478 0.00 0.00 0.00 1.98
3553 3871 4.837860 ACTGATTAGCCTCTCCCTTATCTG 59.162 45.833 0.00 0.00 0.00 2.90
3554 3872 4.163427 TGATTAGCCTCTCCCTTATCTGG 58.837 47.826 0.00 0.00 0.00 3.86
3571 3889 1.808945 CTGGTGCTGTCATGTTTCTCC 59.191 52.381 0.00 0.00 0.00 3.71
3574 3892 2.887152 GGTGCTGTCATGTTTCTCCTTT 59.113 45.455 0.00 0.00 0.00 3.11
3575 3893 3.304928 GGTGCTGTCATGTTTCTCCTTTG 60.305 47.826 0.00 0.00 0.00 2.77
3576 3894 2.886523 TGCTGTCATGTTTCTCCTTTGG 59.113 45.455 0.00 0.00 0.00 3.28
3577 3895 3.149196 GCTGTCATGTTTCTCCTTTGGA 58.851 45.455 0.00 0.00 0.00 3.53
3588 3906 2.034685 TCTCCTTTGGATAGACGCATCG 59.965 50.000 0.00 0.00 0.00 3.84
3616 3941 5.367945 TGGTTACCAGTTTGAGAAGAAGT 57.632 39.130 0.00 0.00 0.00 3.01
3637 3970 2.433318 GCCGTGTGGTGCTCTCTC 60.433 66.667 0.00 0.00 37.67 3.20
3639 3972 1.595993 GCCGTGTGGTGCTCTCTCTA 61.596 60.000 0.00 0.00 37.67 2.43
3640 3973 0.888619 CCGTGTGGTGCTCTCTCTAA 59.111 55.000 0.00 0.00 0.00 2.10
3641 3974 1.478510 CCGTGTGGTGCTCTCTCTAAT 59.521 52.381 0.00 0.00 0.00 1.73
3642 3975 2.480416 CCGTGTGGTGCTCTCTCTAATC 60.480 54.545 0.00 0.00 0.00 1.75
3644 3977 3.628032 CGTGTGGTGCTCTCTCTAATCTA 59.372 47.826 0.00 0.00 0.00 1.98
3645 3978 4.496673 CGTGTGGTGCTCTCTCTAATCTAC 60.497 50.000 0.00 0.00 0.00 2.59
3646 3979 4.399618 GTGTGGTGCTCTCTCTAATCTACA 59.600 45.833 0.00 0.00 0.00 2.74
3647 3980 4.642437 TGTGGTGCTCTCTCTAATCTACAG 59.358 45.833 0.00 0.00 0.00 2.74
3648 3981 4.642885 GTGGTGCTCTCTCTAATCTACAGT 59.357 45.833 0.00 0.00 0.00 3.55
3649 3982 5.823570 GTGGTGCTCTCTCTAATCTACAGTA 59.176 44.000 0.00 0.00 0.00 2.74
3650 3983 6.488683 GTGGTGCTCTCTCTAATCTACAGTAT 59.511 42.308 0.00 0.00 0.00 2.12
3653 3986 9.238368 GGTGCTCTCTCTAATCTACAGTATTAT 57.762 37.037 0.00 0.00 0.00 1.28
3688 4029 6.423862 CAATGTCAAAAATGAGGCAAAGTTG 58.576 36.000 0.00 0.00 0.00 3.16
3698 4042 5.375417 TGAGGCAAAGTTGTGATGTAATG 57.625 39.130 0.00 0.00 0.00 1.90
3699 4043 4.218200 TGAGGCAAAGTTGTGATGTAATGG 59.782 41.667 0.00 0.00 0.00 3.16
3706 4050 1.447945 TGTGATGTAATGGCGTGTGG 58.552 50.000 0.00 0.00 0.00 4.17
3708 4052 0.615850 TGATGTAATGGCGTGTGGGA 59.384 50.000 0.00 0.00 0.00 4.37
3709 4053 1.211703 TGATGTAATGGCGTGTGGGAT 59.788 47.619 0.00 0.00 0.00 3.85
3725 4069 0.532115 GGATTTTGCTTGCCGTCCAT 59.468 50.000 0.00 0.00 0.00 3.41
3727 4071 2.165437 GGATTTTGCTTGCCGTCCATTA 59.835 45.455 0.00 0.00 0.00 1.90
3728 4072 3.181476 GGATTTTGCTTGCCGTCCATTAT 60.181 43.478 0.00 0.00 0.00 1.28
3731 4075 4.566545 TTTGCTTGCCGTCCATTATATG 57.433 40.909 0.00 0.00 0.00 1.78
3735 4079 3.303990 GCTTGCCGTCCATTATATGTGTG 60.304 47.826 0.00 0.00 0.00 3.82
3736 4080 3.552132 TGCCGTCCATTATATGTGTGT 57.448 42.857 0.00 0.00 0.00 3.72
3737 4081 4.674281 TGCCGTCCATTATATGTGTGTA 57.326 40.909 0.00 0.00 0.00 2.90
3738 4082 5.222079 TGCCGTCCATTATATGTGTGTAT 57.778 39.130 0.00 0.00 0.00 2.29
3739 4083 6.347859 TGCCGTCCATTATATGTGTGTATA 57.652 37.500 0.00 0.00 0.00 1.47
3740 4084 6.941857 TGCCGTCCATTATATGTGTGTATAT 58.058 36.000 0.00 0.00 0.00 0.86
3741 4085 6.816140 TGCCGTCCATTATATGTGTGTATATG 59.184 38.462 0.00 0.00 0.00 1.78
3742 4086 6.816640 GCCGTCCATTATATGTGTGTATATGT 59.183 38.462 0.00 0.00 0.00 2.29
3743 4087 7.201522 GCCGTCCATTATATGTGTGTATATGTG 60.202 40.741 0.00 0.00 0.00 3.21
3744 4088 7.201522 CCGTCCATTATATGTGTGTATATGTGC 60.202 40.741 0.00 0.00 0.00 4.57
3745 4089 7.201522 CGTCCATTATATGTGTGTATATGTGCC 60.202 40.741 0.00 0.00 0.00 5.01
3746 4090 6.816140 TCCATTATATGTGTGTATATGTGCCG 59.184 38.462 0.00 0.00 0.00 5.69
3747 4091 6.816140 CCATTATATGTGTGTATATGTGCCGA 59.184 38.462 0.00 0.00 0.00 5.54
3748 4092 7.495606 CCATTATATGTGTGTATATGTGCCGAT 59.504 37.037 0.00 0.00 0.00 4.18
3749 4093 7.826260 TTATATGTGTGTATATGTGCCGATG 57.174 36.000 0.00 0.00 0.00 3.84
3750 4094 3.810310 TGTGTGTATATGTGCCGATGA 57.190 42.857 0.00 0.00 0.00 2.92
3751 4095 4.130286 TGTGTGTATATGTGCCGATGAA 57.870 40.909 0.00 0.00 0.00 2.57
3752 4096 4.702831 TGTGTGTATATGTGCCGATGAAT 58.297 39.130 0.00 0.00 0.00 2.57
3753 4097 5.122519 TGTGTGTATATGTGCCGATGAATT 58.877 37.500 0.00 0.00 0.00 2.17
3754 4098 5.588246 TGTGTGTATATGTGCCGATGAATTT 59.412 36.000 0.00 0.00 0.00 1.82
3755 4099 5.909054 GTGTGTATATGTGCCGATGAATTTG 59.091 40.000 0.00 0.00 0.00 2.32
3756 4100 5.588246 TGTGTATATGTGCCGATGAATTTGT 59.412 36.000 0.00 0.00 0.00 2.83
3757 4101 5.909054 GTGTATATGTGCCGATGAATTTGTG 59.091 40.000 0.00 0.00 0.00 3.33
3758 4102 5.819901 TGTATATGTGCCGATGAATTTGTGA 59.180 36.000 0.00 0.00 0.00 3.58
3759 4103 5.833406 ATATGTGCCGATGAATTTGTGAA 57.167 34.783 0.00 0.00 0.00 3.18
3760 4104 3.281341 TGTGCCGATGAATTTGTGAAC 57.719 42.857 0.00 0.00 0.00 3.18
3761 4105 2.884012 TGTGCCGATGAATTTGTGAACT 59.116 40.909 0.00 0.00 0.00 3.01
3762 4106 3.236816 GTGCCGATGAATTTGTGAACTG 58.763 45.455 0.00 0.00 0.00 3.16
3763 4107 2.228582 TGCCGATGAATTTGTGAACTGG 59.771 45.455 0.00 0.00 0.00 4.00
3764 4108 2.228822 GCCGATGAATTTGTGAACTGGT 59.771 45.455 0.00 0.00 0.00 4.00
3765 4109 3.305335 GCCGATGAATTTGTGAACTGGTT 60.305 43.478 0.00 0.00 0.00 3.67
3766 4110 4.475944 CCGATGAATTTGTGAACTGGTTC 58.524 43.478 6.53 6.53 39.91 3.62
3767 4111 4.151070 CGATGAATTTGTGAACTGGTTCG 58.849 43.478 8.63 0.00 42.28 3.95
3768 4112 4.084066 CGATGAATTTGTGAACTGGTTCGA 60.084 41.667 8.63 0.00 42.28 3.71
3769 4113 5.559991 CGATGAATTTGTGAACTGGTTCGAA 60.560 40.000 8.63 0.00 42.28 3.71
3770 4114 5.168526 TGAATTTGTGAACTGGTTCGAAG 57.831 39.130 0.00 0.00 42.28 3.79
3771 4115 4.036262 TGAATTTGTGAACTGGTTCGAAGG 59.964 41.667 0.00 0.00 42.28 3.46
3772 4116 2.992124 TTGTGAACTGGTTCGAAGGA 57.008 45.000 0.00 0.00 42.28 3.36
3773 4117 3.485463 TTGTGAACTGGTTCGAAGGAT 57.515 42.857 0.00 0.00 42.28 3.24
3774 4118 3.485463 TGTGAACTGGTTCGAAGGATT 57.515 42.857 0.00 0.00 42.28 3.01
3775 4119 3.815809 TGTGAACTGGTTCGAAGGATTT 58.184 40.909 0.00 0.00 42.28 2.17
3776 4120 4.204012 TGTGAACTGGTTCGAAGGATTTT 58.796 39.130 0.00 0.00 42.28 1.82
3777 4121 4.036262 TGTGAACTGGTTCGAAGGATTTTG 59.964 41.667 0.00 0.00 42.28 2.44
3778 4122 4.036380 GTGAACTGGTTCGAAGGATTTTGT 59.964 41.667 0.00 0.00 42.28 2.83
3779 4123 4.274950 TGAACTGGTTCGAAGGATTTTGTC 59.725 41.667 0.00 0.00 42.28 3.18
3780 4124 6.716315 TGAACTGGTTCGAAGGATTTTGTCC 61.716 44.000 0.00 0.00 43.72 4.02
3789 4133 2.989422 GGATTTTGTCCCGTTGACTG 57.011 50.000 4.27 0.00 44.75 3.51
3790 4134 1.068541 GGATTTTGTCCCGTTGACTGC 60.069 52.381 4.27 0.00 44.75 4.40
3791 4135 0.958822 ATTTTGTCCCGTTGACTGCC 59.041 50.000 4.27 0.00 44.75 4.85
3792 4136 1.440938 TTTTGTCCCGTTGACTGCCG 61.441 55.000 4.27 0.00 44.75 5.69
3793 4137 2.596553 TTTGTCCCGTTGACTGCCGT 62.597 55.000 4.27 0.00 44.75 5.68
3794 4138 3.041940 GTCCCGTTGACTGCCGTG 61.042 66.667 0.00 0.00 41.03 4.94
3795 4139 4.980805 TCCCGTTGACTGCCGTGC 62.981 66.667 0.00 0.00 0.00 5.34
3808 4152 3.588906 CGTGCCGCCATGATGCAT 61.589 61.111 0.00 0.00 37.34 3.96
3809 4153 2.027024 GTGCCGCCATGATGCATG 59.973 61.111 2.46 0.00 41.10 4.06
3810 4154 3.906879 TGCCGCCATGATGCATGC 61.907 61.111 11.82 11.82 40.20 4.06
3811 4155 3.906879 GCCGCCATGATGCATGCA 61.907 61.111 25.04 25.04 40.20 3.96
3812 4156 3.047735 CCGCCATGATGCATGCAT 58.952 55.556 32.66 32.66 40.20 3.96
3813 4157 1.372872 CCGCCATGATGCATGCATG 60.373 57.895 36.73 23.71 40.20 4.06
3817 4161 3.199764 CATGATGCATGCATGGCTG 57.800 52.632 36.73 24.29 39.48 4.85
3818 4162 0.389025 CATGATGCATGCATGGCTGT 59.611 50.000 36.73 13.96 39.48 4.40
3819 4163 0.673985 ATGATGCATGCATGGCTGTC 59.326 50.000 36.73 22.21 36.70 3.51
3820 4164 0.395173 TGATGCATGCATGGCTGTCT 60.395 50.000 36.73 12.27 36.70 3.41
3821 4165 1.134037 TGATGCATGCATGGCTGTCTA 60.134 47.619 36.73 10.65 36.70 2.59
3822 4166 1.535896 GATGCATGCATGGCTGTCTAG 59.464 52.381 36.73 0.00 36.70 2.43
3823 4167 0.253894 TGCATGCATGGCTGTCTAGT 59.746 50.000 27.34 0.00 0.00 2.57
3824 4168 0.661552 GCATGCATGGCTGTCTAGTG 59.338 55.000 27.34 0.00 0.00 2.74
3825 4169 0.661552 CATGCATGGCTGTCTAGTGC 59.338 55.000 19.40 0.00 36.39 4.40
3831 4175 1.823976 GGCTGTCTAGTGCCTACCC 59.176 63.158 13.92 0.00 45.26 3.69
3832 4176 0.976073 GGCTGTCTAGTGCCTACCCA 60.976 60.000 13.92 0.00 45.26 4.51
3833 4177 0.461961 GCTGTCTAGTGCCTACCCAG 59.538 60.000 0.00 0.00 0.00 4.45
3834 4178 1.960471 GCTGTCTAGTGCCTACCCAGA 60.960 57.143 0.00 0.00 0.00 3.86
3835 4179 2.672098 CTGTCTAGTGCCTACCCAGAT 58.328 52.381 0.00 0.00 0.00 2.90
3836 4180 2.625790 CTGTCTAGTGCCTACCCAGATC 59.374 54.545 0.00 0.00 0.00 2.75
3837 4181 1.609555 GTCTAGTGCCTACCCAGATCG 59.390 57.143 0.00 0.00 0.00 3.69
3838 4182 0.315568 CTAGTGCCTACCCAGATCGC 59.684 60.000 0.00 0.00 0.00 4.58
3839 4183 0.106167 TAGTGCCTACCCAGATCGCT 60.106 55.000 0.00 0.00 0.00 4.93
3840 4184 1.227380 GTGCCTACCCAGATCGCTG 60.227 63.158 0.00 0.00 41.93 5.18
3841 4185 1.685765 TGCCTACCCAGATCGCTGT 60.686 57.895 0.00 0.00 40.63 4.40
3842 4186 1.068250 GCCTACCCAGATCGCTGTC 59.932 63.158 0.00 0.00 40.63 3.51
3843 4187 1.360551 CCTACCCAGATCGCTGTCG 59.639 63.158 0.00 0.00 40.63 4.35
3853 4197 2.895039 TCGCTGTCGACAAGGAAAC 58.105 52.632 20.49 4.23 40.21 2.78
3854 4198 0.387929 TCGCTGTCGACAAGGAAACT 59.612 50.000 20.49 0.00 41.05 2.66
3855 4199 1.202486 TCGCTGTCGACAAGGAAACTT 60.202 47.619 20.49 0.00 46.06 2.66
3856 4200 1.597663 CGCTGTCGACAAGGAAACTTT 59.402 47.619 20.49 0.00 43.31 2.66
3857 4201 2.599848 CGCTGTCGACAAGGAAACTTTG 60.600 50.000 20.49 4.74 43.31 2.77
3869 4213 3.438087 AGGAAACTTTGCATGAGATGACG 59.562 43.478 0.00 0.00 37.44 4.35
3870 4214 2.907910 AACTTTGCATGAGATGACGC 57.092 45.000 0.00 0.00 0.00 5.19
3871 4215 0.723414 ACTTTGCATGAGATGACGCG 59.277 50.000 3.53 3.53 0.00 6.01
3872 4216 0.723414 CTTTGCATGAGATGACGCGT 59.277 50.000 13.85 13.85 0.00 6.01
3873 4217 0.721154 TTTGCATGAGATGACGCGTC 59.279 50.000 31.66 31.66 0.00 5.19
3874 4218 1.083806 TTGCATGAGATGACGCGTCC 61.084 55.000 34.34 20.90 0.00 4.79
3875 4219 2.240500 GCATGAGATGACGCGTCCC 61.241 63.158 34.34 25.28 0.00 4.46
3876 4220 1.592669 CATGAGATGACGCGTCCCC 60.593 63.158 34.34 24.93 0.00 4.81
3877 4221 1.758514 ATGAGATGACGCGTCCCCT 60.759 57.895 34.34 28.79 0.00 4.79
3878 4222 2.021068 ATGAGATGACGCGTCCCCTG 62.021 60.000 34.34 0.00 0.00 4.45
3879 4223 4.148825 AGATGACGCGTCCCCTGC 62.149 66.667 34.34 18.85 0.00 4.85
3886 4230 3.423154 GCGTCCCCTGCGACTTTG 61.423 66.667 0.00 0.00 0.00 2.77
3887 4231 3.423154 CGTCCCCTGCGACTTTGC 61.423 66.667 0.00 0.00 0.00 3.68
3888 4232 3.056328 GTCCCCTGCGACTTTGCC 61.056 66.667 0.00 0.00 0.00 4.52
3889 4233 4.697756 TCCCCTGCGACTTTGCCG 62.698 66.667 0.00 0.00 0.00 5.69
3891 4235 2.047655 CCCTGCGACTTTGCCGTA 60.048 61.111 0.00 0.00 0.00 4.02
3892 4236 2.100631 CCCTGCGACTTTGCCGTAG 61.101 63.158 0.00 0.00 39.01 3.51
3893 4237 1.374252 CCTGCGACTTTGCCGTAGT 60.374 57.895 0.00 0.00 37.91 2.73
3894 4238 0.108992 CCTGCGACTTTGCCGTAGTA 60.109 55.000 0.00 0.00 37.91 1.82
3895 4239 1.470979 CCTGCGACTTTGCCGTAGTAT 60.471 52.381 0.00 0.00 37.91 2.12
3896 4240 1.852895 CTGCGACTTTGCCGTAGTATC 59.147 52.381 0.00 0.00 35.54 2.24
3897 4241 1.475280 TGCGACTTTGCCGTAGTATCT 59.525 47.619 0.00 0.00 0.00 1.98
3898 4242 2.117910 GCGACTTTGCCGTAGTATCTC 58.882 52.381 0.00 0.00 0.00 2.75
3899 4243 2.223525 GCGACTTTGCCGTAGTATCTCT 60.224 50.000 0.00 0.00 0.00 3.10
3900 4244 3.619729 CGACTTTGCCGTAGTATCTCTC 58.380 50.000 0.00 0.00 0.00 3.20
3901 4245 3.312973 CGACTTTGCCGTAGTATCTCTCT 59.687 47.826 0.00 0.00 0.00 3.10
3902 4246 4.602995 GACTTTGCCGTAGTATCTCTCTG 58.397 47.826 0.00 0.00 0.00 3.35
3903 4247 4.017808 ACTTTGCCGTAGTATCTCTCTGT 58.982 43.478 0.00 0.00 0.00 3.41
3904 4248 5.191426 ACTTTGCCGTAGTATCTCTCTGTA 58.809 41.667 0.00 0.00 0.00 2.74
3905 4249 5.828859 ACTTTGCCGTAGTATCTCTCTGTAT 59.171 40.000 0.00 0.00 0.00 2.29
3906 4250 6.321690 ACTTTGCCGTAGTATCTCTCTGTATT 59.678 38.462 0.00 0.00 0.00 1.89
3907 4251 5.690997 TGCCGTAGTATCTCTCTGTATTG 57.309 43.478 0.00 0.00 0.00 1.90
3908 4252 5.131067 TGCCGTAGTATCTCTCTGTATTGT 58.869 41.667 0.00 0.00 0.00 2.71
3909 4253 5.008712 TGCCGTAGTATCTCTCTGTATTGTG 59.991 44.000 0.00 0.00 0.00 3.33
3910 4254 5.453648 CCGTAGTATCTCTCTGTATTGTGC 58.546 45.833 0.00 0.00 0.00 4.57
3911 4255 5.239744 CCGTAGTATCTCTCTGTATTGTGCT 59.760 44.000 0.00 0.00 0.00 4.40
3912 4256 6.427242 CCGTAGTATCTCTCTGTATTGTGCTA 59.573 42.308 0.00 0.00 0.00 3.49
3913 4257 7.360522 CCGTAGTATCTCTCTGTATTGTGCTAG 60.361 44.444 0.00 0.00 0.00 3.42
3914 4258 6.325919 AGTATCTCTCTGTATTGTGCTAGC 57.674 41.667 8.10 8.10 0.00 3.42
3915 4259 6.068010 AGTATCTCTCTGTATTGTGCTAGCT 58.932 40.000 17.23 0.00 0.00 3.32
3916 4260 4.909696 TCTCTCTGTATTGTGCTAGCTC 57.090 45.455 17.23 13.38 0.00 4.09
3917 4261 3.634448 TCTCTCTGTATTGTGCTAGCTCC 59.366 47.826 17.23 7.15 0.00 4.70
3918 4262 3.365472 TCTCTGTATTGTGCTAGCTCCA 58.635 45.455 17.23 9.88 0.00 3.86
3919 4263 3.131223 TCTCTGTATTGTGCTAGCTCCAC 59.869 47.826 17.23 6.50 0.00 4.02
3920 4264 2.831526 TCTGTATTGTGCTAGCTCCACA 59.168 45.455 17.23 14.18 41.11 4.17
3921 4265 3.118992 TCTGTATTGTGCTAGCTCCACAG 60.119 47.826 23.61 23.61 43.34 3.66
3922 4266 2.831526 TGTATTGTGCTAGCTCCACAGA 59.168 45.455 17.23 10.57 43.34 3.41
3923 4267 2.393271 ATTGTGCTAGCTCCACAGAC 57.607 50.000 17.23 4.14 43.34 3.51
3924 4268 0.321671 TTGTGCTAGCTCCACAGACC 59.678 55.000 17.23 0.00 43.34 3.85
3925 4269 0.831711 TGTGCTAGCTCCACAGACCA 60.832 55.000 17.23 0.00 38.21 4.02
3926 4270 0.390472 GTGCTAGCTCCACAGACCAC 60.390 60.000 17.23 0.00 33.50 4.16
3927 4271 0.831711 TGCTAGCTCCACAGACCACA 60.832 55.000 17.23 0.00 0.00 4.17
3928 4272 0.108424 GCTAGCTCCACAGACCACAG 60.108 60.000 7.70 0.00 0.00 3.66
3929 4273 0.108424 CTAGCTCCACAGACCACAGC 60.108 60.000 0.00 0.00 0.00 4.40
3930 4274 1.877576 TAGCTCCACAGACCACAGCG 61.878 60.000 0.00 0.00 35.14 5.18
3931 4275 2.737180 CTCCACAGACCACAGCGT 59.263 61.111 0.00 0.00 0.00 5.07
3932 4276 1.665916 CTCCACAGACCACAGCGTG 60.666 63.158 2.27 2.27 0.00 5.34
3933 4277 2.108976 CCACAGACCACAGCGTGT 59.891 61.111 7.68 0.00 0.00 4.49
3935 4279 2.588877 ACAGACCACAGCGTGTGC 60.589 61.111 11.23 1.74 46.51 4.57
3936 4280 3.705638 CAGACCACAGCGTGTGCG 61.706 66.667 11.23 8.14 46.51 5.34
3946 4290 2.729491 CGTGTGCGCGTCAGAAGA 60.729 61.111 8.43 0.00 0.00 2.87
3947 4291 2.710971 CGTGTGCGCGTCAGAAGAG 61.711 63.158 8.43 0.00 0.00 2.85
3948 4292 2.734723 TGTGCGCGTCAGAAGAGC 60.735 61.111 8.43 5.13 34.99 4.09
3949 4293 2.734723 GTGCGCGTCAGAAGAGCA 60.735 61.111 10.57 10.57 41.82 4.26
3950 4294 2.431430 TGCGCGTCAGAAGAGCAG 60.431 61.111 10.57 0.00 39.36 4.24
3951 4295 2.431601 GCGCGTCAGAAGAGCAGT 60.432 61.111 8.43 0.00 34.56 4.40
3952 4296 2.440569 GCGCGTCAGAAGAGCAGTC 61.441 63.158 8.43 0.00 34.56 3.51
3953 4297 2.148982 CGCGTCAGAAGAGCAGTCG 61.149 63.158 0.00 0.00 0.00 4.18
3954 4298 1.803519 GCGTCAGAAGAGCAGTCGG 60.804 63.158 0.00 0.00 0.00 4.79
3955 4299 1.581954 CGTCAGAAGAGCAGTCGGT 59.418 57.895 0.00 0.00 0.00 4.69
3956 4300 0.039074 CGTCAGAAGAGCAGTCGGTT 60.039 55.000 0.00 0.00 0.00 4.44
3957 4301 1.603172 CGTCAGAAGAGCAGTCGGTTT 60.603 52.381 0.00 0.00 0.00 3.27
3958 4302 2.062519 GTCAGAAGAGCAGTCGGTTTC 58.937 52.381 0.00 0.00 0.00 2.78
3959 4303 1.000955 TCAGAAGAGCAGTCGGTTTCC 59.999 52.381 0.00 0.00 0.00 3.13
3960 4304 1.001406 CAGAAGAGCAGTCGGTTTCCT 59.999 52.381 0.00 0.00 0.00 3.36
3961 4305 1.694696 AGAAGAGCAGTCGGTTTCCTT 59.305 47.619 0.00 0.00 0.00 3.36
3962 4306 2.070028 GAAGAGCAGTCGGTTTCCTTC 58.930 52.381 0.00 0.00 0.00 3.46
3963 4307 1.343069 AGAGCAGTCGGTTTCCTTCT 58.657 50.000 0.00 0.00 0.00 2.85
3964 4308 1.273886 AGAGCAGTCGGTTTCCTTCTC 59.726 52.381 0.00 0.00 0.00 2.87
3965 4309 0.038159 AGCAGTCGGTTTCCTTCTCG 60.038 55.000 0.00 0.00 0.00 4.04
3966 4310 0.319641 GCAGTCGGTTTCCTTCTCGT 60.320 55.000 0.00 0.00 0.00 4.18
3967 4311 1.872653 GCAGTCGGTTTCCTTCTCGTT 60.873 52.381 0.00 0.00 0.00 3.85
3968 4312 2.480845 CAGTCGGTTTCCTTCTCGTTT 58.519 47.619 0.00 0.00 0.00 3.60
3969 4313 2.870411 CAGTCGGTTTCCTTCTCGTTTT 59.130 45.455 0.00 0.00 0.00 2.43
3970 4314 3.311596 CAGTCGGTTTCCTTCTCGTTTTT 59.688 43.478 0.00 0.00 0.00 1.94
3971 4315 3.311596 AGTCGGTTTCCTTCTCGTTTTTG 59.688 43.478 0.00 0.00 0.00 2.44
3972 4316 2.032426 TCGGTTTCCTTCTCGTTTTTGC 59.968 45.455 0.00 0.00 0.00 3.68
3973 4317 2.032924 CGGTTTCCTTCTCGTTTTTGCT 59.967 45.455 0.00 0.00 0.00 3.91
3974 4318 3.629058 GGTTTCCTTCTCGTTTTTGCTC 58.371 45.455 0.00 0.00 0.00 4.26
3975 4319 3.289076 GTTTCCTTCTCGTTTTTGCTCG 58.711 45.455 0.00 0.00 0.00 5.03
3976 4320 0.865769 TCCTTCTCGTTTTTGCTCGC 59.134 50.000 0.00 0.00 0.00 5.03
3977 4321 0.451135 CCTTCTCGTTTTTGCTCGCG 60.451 55.000 0.00 0.00 0.00 5.87
3978 4322 0.451135 CTTCTCGTTTTTGCTCGCGG 60.451 55.000 6.13 0.00 0.00 6.46
3979 4323 0.876777 TTCTCGTTTTTGCTCGCGGA 60.877 50.000 6.13 0.00 0.00 5.54
3980 4324 1.154654 CTCGTTTTTGCTCGCGGAC 60.155 57.895 6.13 0.00 0.00 4.79
3981 4325 2.496794 CGTTTTTGCTCGCGGACG 60.497 61.111 6.13 2.20 42.01 4.79
3991 4335 4.492160 CGCGGACGAGCTAGGCAA 62.492 66.667 0.85 0.00 43.93 4.52
3992 4336 2.107141 GCGGACGAGCTAGGCAAT 59.893 61.111 0.85 0.00 0.00 3.56
3993 4337 1.521681 GCGGACGAGCTAGGCAATT 60.522 57.895 0.85 0.00 0.00 2.32
3994 4338 1.766143 GCGGACGAGCTAGGCAATTG 61.766 60.000 0.85 0.00 0.00 2.32
3995 4339 0.179111 CGGACGAGCTAGGCAATTGA 60.179 55.000 10.34 0.00 0.00 2.57
3996 4340 1.291132 GGACGAGCTAGGCAATTGAC 58.709 55.000 10.34 6.35 0.00 3.18
3997 4341 1.405526 GGACGAGCTAGGCAATTGACA 60.406 52.381 15.18 0.00 0.00 3.58
3998 4342 2.346803 GACGAGCTAGGCAATTGACAA 58.653 47.619 15.18 0.00 0.00 3.18
3999 4343 2.742053 GACGAGCTAGGCAATTGACAAA 59.258 45.455 15.18 0.00 0.00 2.83
4000 4344 3.347216 ACGAGCTAGGCAATTGACAAAT 58.653 40.909 15.18 0.00 0.00 2.32
4001 4345 3.758554 ACGAGCTAGGCAATTGACAAATT 59.241 39.130 15.18 0.00 36.39 1.82
4002 4346 4.142600 ACGAGCTAGGCAATTGACAAATTC 60.143 41.667 15.18 5.03 33.59 2.17
4003 4347 4.676546 GAGCTAGGCAATTGACAAATTCC 58.323 43.478 15.18 0.67 33.59 3.01
4004 4348 3.129287 AGCTAGGCAATTGACAAATTCCG 59.871 43.478 15.18 0.00 33.59 4.30
4005 4349 3.128589 GCTAGGCAATTGACAAATTCCGA 59.871 43.478 15.18 0.00 33.59 4.55
4006 4350 3.855689 AGGCAATTGACAAATTCCGAG 57.144 42.857 15.18 0.00 33.59 4.63
4007 4351 3.420893 AGGCAATTGACAAATTCCGAGA 58.579 40.909 15.18 0.00 33.59 4.04
4008 4352 3.441572 AGGCAATTGACAAATTCCGAGAG 59.558 43.478 15.18 0.00 33.59 3.20
4022 4366 0.782384 CGAGAGGTTTTCGTCCAACG 59.218 55.000 0.00 0.00 44.19 4.10
4023 4367 0.511653 GAGAGGTTTTCGTCCAACGC 59.488 55.000 0.00 0.00 42.21 4.84
4024 4368 0.883370 AGAGGTTTTCGTCCAACGCC 60.883 55.000 0.00 0.00 42.21 5.68
4025 4369 1.153127 AGGTTTTCGTCCAACGCCA 60.153 52.632 0.00 0.00 42.21 5.69
4026 4370 1.009335 GGTTTTCGTCCAACGCCAC 60.009 57.895 0.00 0.00 42.21 5.01
4027 4371 1.441732 GGTTTTCGTCCAACGCCACT 61.442 55.000 0.00 0.00 42.21 4.00
4028 4372 0.316689 GTTTTCGTCCAACGCCACTG 60.317 55.000 0.00 0.00 42.21 3.66
4029 4373 2.054140 TTTTCGTCCAACGCCACTGC 62.054 55.000 0.00 0.00 42.21 4.40
4030 4374 3.741830 TTCGTCCAACGCCACTGCA 62.742 57.895 0.00 0.00 42.21 4.41
4031 4375 3.716006 CGTCCAACGCCACTGCAG 61.716 66.667 13.48 13.48 37.32 4.41
4032 4376 3.357079 GTCCAACGCCACTGCAGG 61.357 66.667 19.93 2.55 37.32 4.85
4033 4377 3.872603 TCCAACGCCACTGCAGGT 61.873 61.111 19.93 2.70 37.32 4.00
4034 4378 2.031919 CCAACGCCACTGCAGGTA 59.968 61.111 19.93 0.00 37.32 3.08
4035 4379 2.034879 CCAACGCCACTGCAGGTAG 61.035 63.158 19.93 7.11 37.32 3.18
4036 4380 1.005037 CAACGCCACTGCAGGTAGA 60.005 57.895 19.93 0.00 37.32 2.59
4037 4381 1.016130 CAACGCCACTGCAGGTAGAG 61.016 60.000 19.93 10.18 37.32 2.43
4038 4382 2.172483 AACGCCACTGCAGGTAGAGG 62.172 60.000 19.93 12.27 37.32 3.69
4039 4383 2.650116 CGCCACTGCAGGTAGAGGT 61.650 63.158 19.93 0.00 37.32 3.85
4040 4384 1.320344 CGCCACTGCAGGTAGAGGTA 61.320 60.000 19.93 0.00 37.32 3.08
4041 4385 0.461961 GCCACTGCAGGTAGAGGTAG 59.538 60.000 19.93 0.00 37.47 3.18
4042 4386 1.960471 GCCACTGCAGGTAGAGGTAGA 60.960 57.143 19.93 0.00 37.47 2.59
4043 4387 2.672098 CCACTGCAGGTAGAGGTAGAT 58.328 52.381 19.93 0.00 0.00 1.98
4044 4388 2.363680 CCACTGCAGGTAGAGGTAGATG 59.636 54.545 19.93 1.99 0.00 2.90
4045 4389 3.291584 CACTGCAGGTAGAGGTAGATGA 58.708 50.000 19.93 0.00 0.00 2.92
4046 4390 3.894427 CACTGCAGGTAGAGGTAGATGAT 59.106 47.826 19.93 0.00 0.00 2.45
4047 4391 5.073428 CACTGCAGGTAGAGGTAGATGATA 58.927 45.833 19.93 0.00 0.00 2.15
4048 4392 5.182950 CACTGCAGGTAGAGGTAGATGATAG 59.817 48.000 19.93 0.00 0.00 2.08
4049 4393 4.667573 TGCAGGTAGAGGTAGATGATAGG 58.332 47.826 0.00 0.00 0.00 2.57
4050 4394 4.106502 TGCAGGTAGAGGTAGATGATAGGT 59.893 45.833 0.00 0.00 0.00 3.08
4051 4395 4.703093 GCAGGTAGAGGTAGATGATAGGTC 59.297 50.000 0.00 0.00 0.00 3.85
4052 4396 4.938832 CAGGTAGAGGTAGATGATAGGTCG 59.061 50.000 0.00 0.00 0.00 4.79
4053 4397 4.019141 AGGTAGAGGTAGATGATAGGTCGG 60.019 50.000 0.00 0.00 0.00 4.79
4054 4398 4.019501 GGTAGAGGTAGATGATAGGTCGGA 60.020 50.000 0.00 0.00 0.00 4.55
4055 4399 4.938575 AGAGGTAGATGATAGGTCGGAT 57.061 45.455 0.00 0.00 0.00 4.18
4056 4400 6.126825 GGTAGAGGTAGATGATAGGTCGGATA 60.127 46.154 0.00 0.00 0.00 2.59
4057 4401 6.584471 AGAGGTAGATGATAGGTCGGATAT 57.416 41.667 0.00 0.00 0.00 1.63
4058 4402 6.361433 AGAGGTAGATGATAGGTCGGATATG 58.639 44.000 0.00 0.00 0.00 1.78
4059 4403 6.069323 AGAGGTAGATGATAGGTCGGATATGT 60.069 42.308 0.00 0.00 0.00 2.29
4060 4404 7.127493 AGAGGTAGATGATAGGTCGGATATGTA 59.873 40.741 0.00 0.00 0.00 2.29
4061 4405 7.284074 AGGTAGATGATAGGTCGGATATGTAG 58.716 42.308 0.00 0.00 0.00 2.74
4062 4406 7.055378 GGTAGATGATAGGTCGGATATGTAGT 58.945 42.308 0.00 0.00 0.00 2.73
4063 4407 7.556996 GGTAGATGATAGGTCGGATATGTAGTT 59.443 40.741 0.00 0.00 0.00 2.24
4064 4408 9.610705 GTAGATGATAGGTCGGATATGTAGTTA 57.389 37.037 0.00 0.00 0.00 2.24
4065 4409 8.740123 AGATGATAGGTCGGATATGTAGTTAG 57.260 38.462 0.00 0.00 0.00 2.34
4066 4410 7.776030 AGATGATAGGTCGGATATGTAGTTAGG 59.224 40.741 0.00 0.00 0.00 2.69
4067 4411 5.651139 TGATAGGTCGGATATGTAGTTAGGC 59.349 44.000 0.00 0.00 0.00 3.93
4068 4412 3.840991 AGGTCGGATATGTAGTTAGGCA 58.159 45.455 0.00 0.00 0.00 4.75
4069 4413 3.827302 AGGTCGGATATGTAGTTAGGCAG 59.173 47.826 0.00 0.00 0.00 4.85
4070 4414 3.056749 GGTCGGATATGTAGTTAGGCAGG 60.057 52.174 0.00 0.00 0.00 4.85
4071 4415 3.573110 GTCGGATATGTAGTTAGGCAGGT 59.427 47.826 0.00 0.00 0.00 4.00
4072 4416 3.825014 TCGGATATGTAGTTAGGCAGGTC 59.175 47.826 0.00 0.00 0.00 3.85
4073 4417 3.827302 CGGATATGTAGTTAGGCAGGTCT 59.173 47.826 0.00 0.00 0.00 3.85
4074 4418 4.281182 CGGATATGTAGTTAGGCAGGTCTT 59.719 45.833 0.00 0.00 0.00 3.01
4075 4419 5.475909 CGGATATGTAGTTAGGCAGGTCTTA 59.524 44.000 0.00 0.00 0.00 2.10
4076 4420 6.569994 CGGATATGTAGTTAGGCAGGTCTTAC 60.570 46.154 0.00 0.00 0.00 2.34
4077 4421 6.494146 GGATATGTAGTTAGGCAGGTCTTACT 59.506 42.308 0.00 0.00 32.37 2.24
4078 4422 7.668886 GGATATGTAGTTAGGCAGGTCTTACTA 59.331 40.741 0.00 0.00 30.55 1.82
4079 4423 9.245481 GATATGTAGTTAGGCAGGTCTTACTAT 57.755 37.037 3.47 0.00 33.37 2.12
4080 4424 7.916077 ATGTAGTTAGGCAGGTCTTACTATT 57.084 36.000 3.47 0.00 33.37 1.73
4081 4425 7.729124 TGTAGTTAGGCAGGTCTTACTATTT 57.271 36.000 3.47 0.00 33.37 1.40
4082 4426 8.142485 TGTAGTTAGGCAGGTCTTACTATTTT 57.858 34.615 3.47 0.00 33.37 1.82
4083 4427 9.258629 TGTAGTTAGGCAGGTCTTACTATTTTA 57.741 33.333 3.47 0.00 33.37 1.52
4084 4428 9.526713 GTAGTTAGGCAGGTCTTACTATTTTAC 57.473 37.037 3.47 0.00 33.37 2.01
4085 4429 8.142485 AGTTAGGCAGGTCTTACTATTTTACA 57.858 34.615 0.00 0.00 0.00 2.41
4086 4430 8.258708 AGTTAGGCAGGTCTTACTATTTTACAG 58.741 37.037 0.00 0.00 0.00 2.74
4087 4431 6.622427 AGGCAGGTCTTACTATTTTACAGT 57.378 37.500 0.00 0.00 0.00 3.55
4088 4432 6.641474 AGGCAGGTCTTACTATTTTACAGTC 58.359 40.000 0.00 0.00 0.00 3.51
4089 4433 6.212791 AGGCAGGTCTTACTATTTTACAGTCA 59.787 38.462 0.00 0.00 0.00 3.41
4090 4434 6.535508 GGCAGGTCTTACTATTTTACAGTCAG 59.464 42.308 0.00 0.00 0.00 3.51
4091 4435 7.097834 GCAGGTCTTACTATTTTACAGTCAGT 58.902 38.462 0.00 0.00 0.00 3.41
4092 4436 7.063544 GCAGGTCTTACTATTTTACAGTCAGTG 59.936 40.741 0.00 0.00 0.00 3.66
4093 4437 8.088981 CAGGTCTTACTATTTTACAGTCAGTGT 58.911 37.037 0.00 0.00 43.86 3.55
4094 4438 8.088981 AGGTCTTACTATTTTACAGTCAGTGTG 58.911 37.037 0.00 0.00 40.69 3.82
4095 4439 7.871463 GGTCTTACTATTTTACAGTCAGTGTGT 59.129 37.037 0.00 0.00 40.69 3.72
4096 4440 8.700644 GTCTTACTATTTTACAGTCAGTGTGTG 58.299 37.037 0.00 0.00 40.69 3.82
4097 4441 5.924475 ACTATTTTACAGTCAGTGTGTGC 57.076 39.130 0.00 0.00 40.69 4.57
4098 4442 5.364778 ACTATTTTACAGTCAGTGTGTGCA 58.635 37.500 0.00 0.00 40.69 4.57
4099 4443 5.820423 ACTATTTTACAGTCAGTGTGTGCAA 59.180 36.000 0.00 0.00 40.69 4.08
4100 4444 5.574891 ATTTTACAGTCAGTGTGTGCAAA 57.425 34.783 0.00 0.00 40.69 3.68
4101 4445 5.574891 TTTTACAGTCAGTGTGTGCAAAT 57.425 34.783 0.00 0.00 40.69 2.32
4102 4446 4.811555 TTACAGTCAGTGTGTGCAAATC 57.188 40.909 0.00 0.00 40.69 2.17
4103 4447 2.642427 ACAGTCAGTGTGTGCAAATCA 58.358 42.857 0.00 0.00 38.28 2.57
4104 4448 2.355756 ACAGTCAGTGTGTGCAAATCAC 59.644 45.455 8.50 8.50 45.82 3.06
4105 4449 1.949525 AGTCAGTGTGTGCAAATCACC 59.050 47.619 11.70 1.54 45.03 4.02
4106 4450 0.943673 TCAGTGTGTGCAAATCACCG 59.056 50.000 11.70 4.49 45.03 4.94
4107 4451 0.943673 CAGTGTGTGCAAATCACCGA 59.056 50.000 11.70 0.00 45.03 4.69
4108 4452 1.536766 CAGTGTGTGCAAATCACCGAT 59.463 47.619 11.70 0.00 45.03 4.18
4109 4453 1.536766 AGTGTGTGCAAATCACCGATG 59.463 47.619 11.70 0.00 45.03 3.84
4110 4454 1.266718 GTGTGTGCAAATCACCGATGT 59.733 47.619 3.73 0.00 45.03 3.06
4111 4455 1.266446 TGTGTGCAAATCACCGATGTG 59.734 47.619 3.73 0.00 45.03 3.21
4124 4468 5.753744 TCACCGATGTGACAAAACATAAAC 58.246 37.500 0.00 0.00 46.40 2.01
4125 4469 4.915085 CACCGATGTGACAAAACATAAACC 59.085 41.667 0.00 0.00 45.76 3.27
4126 4470 4.580995 ACCGATGTGACAAAACATAAACCA 59.419 37.500 0.00 0.00 40.87 3.67
4127 4471 5.067936 ACCGATGTGACAAAACATAAACCAA 59.932 36.000 0.00 0.00 40.87 3.67
4128 4472 5.980116 CCGATGTGACAAAACATAAACCAAA 59.020 36.000 0.00 0.00 40.87 3.28
4129 4473 6.074569 CCGATGTGACAAAACATAAACCAAAC 60.075 38.462 0.00 0.00 40.87 2.93
4130 4474 6.473778 CGATGTGACAAAACATAAACCAAACA 59.526 34.615 0.00 0.00 40.87 2.83
4131 4475 6.952935 TGTGACAAAACATAAACCAAACAC 57.047 33.333 0.00 0.00 0.00 3.32
4132 4476 6.692486 TGTGACAAAACATAAACCAAACACT 58.308 32.000 0.00 0.00 0.00 3.55
4133 4477 7.155328 TGTGACAAAACATAAACCAAACACTT 58.845 30.769 0.00 0.00 0.00 3.16
4134 4478 8.304596 TGTGACAAAACATAAACCAAACACTTA 58.695 29.630 0.00 0.00 0.00 2.24
4135 4479 9.141400 GTGACAAAACATAAACCAAACACTTAA 57.859 29.630 0.00 0.00 0.00 1.85
4136 4480 9.706691 TGACAAAACATAAACCAAACACTTAAA 57.293 25.926 0.00 0.00 0.00 1.52
4160 4504 6.775594 AAAATAATGGACCCTAAGAGCAAC 57.224 37.500 0.00 0.00 0.00 4.17
4161 4505 5.717119 AATAATGGACCCTAAGAGCAACT 57.283 39.130 0.00 0.00 0.00 3.16
4162 4506 3.636153 AATGGACCCTAAGAGCAACTC 57.364 47.619 0.00 0.00 0.00 3.01
4163 4507 2.327325 TGGACCCTAAGAGCAACTCT 57.673 50.000 0.00 0.00 43.37 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
231 232 4.735132 TTCGCCGTCAAGCTCGGG 62.735 66.667 13.61 4.83 46.90 5.14
309 310 2.106131 ACGCAGTTCACGCTCACA 59.894 55.556 0.00 0.00 37.78 3.58
338 339 1.767036 CTGGACATGGTTGGGGACA 59.233 57.895 0.00 0.00 39.83 4.02
345 346 1.303317 GGCGTTCCTGGACATGGTT 60.303 57.895 0.00 0.00 0.00 3.67
861 888 0.535553 TCGGTTTGGGGAAAAGTCGG 60.536 55.000 0.00 0.00 0.00 4.79
864 891 2.429250 CAGTTTCGGTTTGGGGAAAAGT 59.571 45.455 0.00 0.00 34.26 2.66
921 953 4.244802 CGGCCGAGAGCGAGAGAC 62.245 72.222 24.07 0.00 45.17 3.36
984 1016 2.289979 ATCTCCCCCTCCCCCTCT 60.290 66.667 0.00 0.00 0.00 3.69
1214 1275 2.506217 ACCGTATCTGCACGCACG 60.506 61.111 2.97 2.97 40.59 5.34
1215 1276 3.081133 CACCGTATCTGCACGCAC 58.919 61.111 0.00 0.00 40.59 5.34
1216 1277 2.813474 GCACCGTATCTGCACGCA 60.813 61.111 0.00 0.00 40.59 5.24
1217 1278 3.913573 CGCACCGTATCTGCACGC 61.914 66.667 0.00 0.00 40.59 5.34
1338 1410 2.667536 AGCACAGTCTTGCAGGCG 60.668 61.111 8.92 0.00 45.62 5.52
1349 1421 3.314635 AGAAGAAAACTTGAGCAGCACAG 59.685 43.478 0.00 0.00 0.00 3.66
1423 1503 7.097834 GGAAATTAACACTGAGTGCTACTAGT 58.902 38.462 13.37 0.00 36.98 2.57
1426 1506 5.865085 TGGAAATTAACACTGAGTGCTACT 58.135 37.500 13.37 0.00 36.98 2.57
1449 1529 9.807649 GAGTAGCAATGAACATTGGAAATTATT 57.192 29.630 23.05 0.00 46.14 1.40
1489 1602 7.058525 TCTGGCTGCTAATACAACTAGTACTA 58.941 38.462 1.89 1.89 35.05 1.82
1491 1604 6.145338 TCTGGCTGCTAATACAACTAGTAC 57.855 41.667 0.00 0.00 35.05 2.73
1493 1606 5.677319 TTCTGGCTGCTAATACAACTAGT 57.323 39.130 0.00 0.00 0.00 2.57
1494 1607 6.283694 TGATTCTGGCTGCTAATACAACTAG 58.716 40.000 0.00 0.00 0.00 2.57
1496 1609 5.102953 TGATTCTGGCTGCTAATACAACT 57.897 39.130 0.00 0.00 0.00 3.16
1497 1610 6.183360 ACAATGATTCTGGCTGCTAATACAAC 60.183 38.462 0.00 0.00 0.00 3.32
1498 1611 5.887598 ACAATGATTCTGGCTGCTAATACAA 59.112 36.000 0.00 0.00 0.00 2.41
1499 1612 5.297527 CACAATGATTCTGGCTGCTAATACA 59.702 40.000 0.00 0.00 0.00 2.29
1507 1659 1.843368 ACCCACAATGATTCTGGCTG 58.157 50.000 0.00 0.00 0.00 4.85
1591 1754 6.706270 GTGATAATAATCATCTTGTCACGGGT 59.294 38.462 0.00 0.00 43.87 5.28
1762 1934 0.248289 CCAAATCCCAAGCAGCAAGG 59.752 55.000 0.00 0.00 0.00 3.61
1812 1985 5.475220 AGATCCCGTATACAGAGTGAAGATG 59.525 44.000 3.32 0.00 0.00 2.90
1859 2034 5.640732 ACGAGGATGTTTCATTTGCAATAC 58.359 37.500 0.00 0.00 0.00 1.89
1869 2044 4.330944 ACTGTACAACGAGGATGTTTCA 57.669 40.909 0.00 0.00 32.27 2.69
1873 2048 4.859304 TTGTACTGTACAACGAGGATGT 57.141 40.909 25.14 0.00 43.23 3.06
1924 2112 5.006165 GGATGATAGTTCTTGACTTCTTGCG 59.994 44.000 0.00 0.00 39.86 4.85
2066 2255 3.614870 GCGGAGGAAAGTTTTGCATCAAT 60.615 43.478 0.00 0.00 0.00 2.57
2092 2281 3.490348 AGAAACATGCTAAGCACCTTGT 58.510 40.909 0.00 0.00 43.04 3.16
2139 2328 9.442047 CTCAATTAGTTGACTTAATCAGAACCT 57.558 33.333 0.00 0.00 39.36 3.50
2226 2415 6.381801 AGCATGCATGTAAACTCTAAAACAC 58.618 36.000 26.79 5.24 0.00 3.32
2256 2445 7.452813 AGACAGAGGAAAAGAAAAATATTGCCT 59.547 33.333 0.00 0.00 0.00 4.75
2257 2446 7.606349 AGACAGAGGAAAAGAAAAATATTGCC 58.394 34.615 0.00 0.00 0.00 4.52
2350 2540 1.537202 GTGGCAAGTGTCTTGATGGAC 59.463 52.381 12.77 0.00 36.81 4.02
2497 2695 3.857052 TGGTTCAGTAGGTTTATGAGCG 58.143 45.455 0.00 0.00 0.00 5.03
2499 2697 9.613428 TCATAAATGGTTCAGTAGGTTTATGAG 57.387 33.333 11.96 0.00 40.62 2.90
2531 2729 3.198853 AGTTCCTCTGAGGCAGATAAACC 59.801 47.826 19.08 2.83 39.92 3.27
2532 2730 4.479786 AGTTCCTCTGAGGCAGATAAAC 57.520 45.455 19.08 15.59 39.92 2.01
2776 3013 6.183360 GCAACTTTTATGTCAATCTGCACATG 60.183 38.462 0.00 0.00 34.92 3.21
2848 3085 7.016072 ACAAGCTTAGCCATGAGTTAGATATCT 59.984 37.037 10.73 10.73 0.00 1.98
2849 3086 7.117523 CACAAGCTTAGCCATGAGTTAGATATC 59.882 40.741 13.38 0.00 0.00 1.63
2850 3087 6.933521 CACAAGCTTAGCCATGAGTTAGATAT 59.066 38.462 13.38 0.00 0.00 1.63
2879 3117 9.866798 TGTGATGAGCTATAATATCAGATTGAC 57.133 33.333 0.00 0.00 30.86 3.18
2883 3121 7.418827 GCCCTGTGATGAGCTATAATATCAGAT 60.419 40.741 0.00 0.00 30.86 2.90
2887 3125 5.982356 TGCCCTGTGATGAGCTATAATATC 58.018 41.667 0.00 0.00 0.00 1.63
2896 3144 2.338577 AATACTGCCCTGTGATGAGC 57.661 50.000 0.00 0.00 0.00 4.26
2919 3167 7.673641 AAGGGATGCATTGGATATTTTTACA 57.326 32.000 0.00 0.00 0.00 2.41
2922 3170 8.771286 AGTAAAAGGGATGCATTGGATATTTTT 58.229 29.630 0.00 10.38 0.00 1.94
2952 3200 1.165907 TTTGCCGAGTTCAGCAGGTG 61.166 55.000 0.00 0.00 40.73 4.00
3021 3269 4.027132 CAGCATGTTAACGTCGTACATACC 60.027 45.833 12.25 7.78 31.64 2.73
3029 3277 3.416277 CCAATTCAGCATGTTAACGTCG 58.584 45.455 0.00 0.00 37.40 5.12
3050 3302 2.654987 GTTCAGCTGCTTGTTTACTGC 58.345 47.619 9.47 0.00 0.00 4.40
3061 3313 0.319900 TCTCCTTGTCGTTCAGCTGC 60.320 55.000 9.47 0.00 0.00 5.25
3148 3400 4.142271 GGGACGAGCTAATATGAGGATGAG 60.142 50.000 0.00 0.00 0.00 2.90
3149 3401 3.764434 GGGACGAGCTAATATGAGGATGA 59.236 47.826 0.00 0.00 0.00 2.92
3247 3512 6.127703 CCAGGTATAGTGTCTTTCTCTCGAAA 60.128 42.308 0.00 0.00 37.55 3.46
3268 3533 3.880040 TGGCACATACATGACCAGG 57.120 52.632 0.00 0.00 34.37 4.45
3312 3577 3.565764 TTGCAGATATTCCAGGGAGTG 57.434 47.619 0.00 0.00 0.00 3.51
3328 3595 3.068560 GCATGAAGAAAAAGGCATTGCA 58.931 40.909 11.39 0.00 0.00 4.08
3336 3603 2.712057 ACGCAGGCATGAAGAAAAAG 57.288 45.000 0.62 0.00 0.00 2.27
3354 3653 7.201839 CCTCCTACTTTGAAGGACTAGTCATAC 60.202 44.444 23.91 13.79 38.24 2.39
3361 3661 3.338824 TCCCCTCCTACTTTGAAGGACTA 59.661 47.826 0.00 0.00 38.24 2.59
3393 3704 1.667236 TAGGACCAAATCATGCTGCG 58.333 50.000 0.00 0.00 0.00 5.18
3468 3785 4.675146 GCGCATCACATTCCACTTGTAAAT 60.675 41.667 0.30 0.00 0.00 1.40
3506 3824 3.605664 AACCAAAGCACGGCAGGC 61.606 61.111 0.00 0.00 0.00 4.85
3507 3825 2.336088 CAACCAAAGCACGGCAGG 59.664 61.111 0.00 0.81 0.00 4.85
3508 3826 1.299316 CACAACCAAAGCACGGCAG 60.299 57.895 0.00 0.00 0.00 4.85
3514 3832 6.349280 GCTAATCAGTAATCACAACCAAAGCA 60.349 38.462 0.00 0.00 0.00 3.91
3520 3838 5.675538 AGAGGCTAATCAGTAATCACAACC 58.324 41.667 0.00 0.00 0.00 3.77
3539 3857 1.415659 CAGCACCAGATAAGGGAGAGG 59.584 57.143 0.00 0.00 0.00 3.69
3552 3870 1.421268 AGGAGAAACATGACAGCACCA 59.579 47.619 0.00 0.00 0.00 4.17
3553 3871 2.191128 AGGAGAAACATGACAGCACC 57.809 50.000 0.00 0.00 0.00 5.01
3554 3872 3.304928 CCAAAGGAGAAACATGACAGCAC 60.305 47.826 0.00 0.00 0.00 4.40
3571 3889 3.785505 GCAAACGATGCGTCTATCCAAAG 60.786 47.826 4.05 0.00 46.87 2.77
3574 3892 1.286501 GCAAACGATGCGTCTATCCA 58.713 50.000 4.05 0.00 46.87 3.41
3600 3924 2.810852 GCTCCACTTCTTCTCAAACTGG 59.189 50.000 0.00 0.00 0.00 4.00
3603 3927 1.801178 CGGCTCCACTTCTTCTCAAAC 59.199 52.381 0.00 0.00 0.00 2.93
3608 3933 0.034059 CACACGGCTCCACTTCTTCT 59.966 55.000 0.00 0.00 0.00 2.85
3644 3977 9.712305 GACATTGCCAAGACTATATAATACTGT 57.288 33.333 0.00 0.00 0.00 3.55
3645 3978 9.710900 TGACATTGCCAAGACTATATAATACTG 57.289 33.333 0.00 0.00 0.00 2.74
3653 3986 8.347004 TCATTTTTGACATTGCCAAGACTATA 57.653 30.769 0.00 0.00 0.00 1.31
3675 4008 5.105635 CCATTACATCACAACTTTGCCTCAT 60.106 40.000 0.00 0.00 0.00 2.90
3688 4029 0.732571 CCCACACGCCATTACATCAC 59.267 55.000 0.00 0.00 0.00 3.06
3698 4042 0.667184 CAAGCAAAATCCCACACGCC 60.667 55.000 0.00 0.00 0.00 5.68
3699 4043 1.284297 GCAAGCAAAATCCCACACGC 61.284 55.000 0.00 0.00 0.00 5.34
3706 4050 0.532115 ATGGACGGCAAGCAAAATCC 59.468 50.000 0.00 0.00 0.00 3.01
3708 4052 5.068987 ACATATAATGGACGGCAAGCAAAAT 59.931 36.000 0.00 0.00 33.60 1.82
3709 4053 4.400884 ACATATAATGGACGGCAAGCAAAA 59.599 37.500 0.00 0.00 33.60 2.44
3725 4069 7.607250 TCATCGGCACATATACACACATATAA 58.393 34.615 0.00 0.00 0.00 0.98
3727 4071 6.036577 TCATCGGCACATATACACACATAT 57.963 37.500 0.00 0.00 0.00 1.78
3728 4072 5.461032 TCATCGGCACATATACACACATA 57.539 39.130 0.00 0.00 0.00 2.29
3731 4075 5.673337 AATTCATCGGCACATATACACAC 57.327 39.130 0.00 0.00 0.00 3.82
3735 4079 6.299023 TCACAAATTCATCGGCACATATAC 57.701 37.500 0.00 0.00 0.00 1.47
3736 4080 6.542005 AGTTCACAAATTCATCGGCACATATA 59.458 34.615 0.00 0.00 0.00 0.86
3737 4081 5.357878 AGTTCACAAATTCATCGGCACATAT 59.642 36.000 0.00 0.00 0.00 1.78
3738 4082 4.699735 AGTTCACAAATTCATCGGCACATA 59.300 37.500 0.00 0.00 0.00 2.29
3739 4083 3.507233 AGTTCACAAATTCATCGGCACAT 59.493 39.130 0.00 0.00 0.00 3.21
3740 4084 2.884012 AGTTCACAAATTCATCGGCACA 59.116 40.909 0.00 0.00 0.00 4.57
3741 4085 3.236816 CAGTTCACAAATTCATCGGCAC 58.763 45.455 0.00 0.00 0.00 5.01
3742 4086 2.228582 CCAGTTCACAAATTCATCGGCA 59.771 45.455 0.00 0.00 0.00 5.69
3743 4087 2.228822 ACCAGTTCACAAATTCATCGGC 59.771 45.455 0.00 0.00 0.00 5.54
3744 4088 4.475944 GAACCAGTTCACAAATTCATCGG 58.524 43.478 5.66 0.00 39.31 4.18
3745 4089 4.084066 TCGAACCAGTTCACAAATTCATCG 60.084 41.667 10.90 0.00 39.46 3.84
3746 4090 5.356882 TCGAACCAGTTCACAAATTCATC 57.643 39.130 10.90 0.00 39.46 2.92
3747 4091 5.278463 CCTTCGAACCAGTTCACAAATTCAT 60.278 40.000 10.90 0.00 39.46 2.57
3748 4092 4.036262 CCTTCGAACCAGTTCACAAATTCA 59.964 41.667 10.90 0.00 39.46 2.57
3749 4093 4.274950 TCCTTCGAACCAGTTCACAAATTC 59.725 41.667 10.90 0.00 39.46 2.17
3750 4094 4.204012 TCCTTCGAACCAGTTCACAAATT 58.796 39.130 10.90 0.00 39.46 1.82
3751 4095 3.815809 TCCTTCGAACCAGTTCACAAAT 58.184 40.909 10.90 0.00 39.46 2.32
3752 4096 3.269538 TCCTTCGAACCAGTTCACAAA 57.730 42.857 10.90 1.67 39.46 2.83
3753 4097 2.992124 TCCTTCGAACCAGTTCACAA 57.008 45.000 10.90 2.34 39.46 3.33
3754 4098 3.485463 AATCCTTCGAACCAGTTCACA 57.515 42.857 10.90 0.00 39.46 3.58
3755 4099 4.036380 ACAAAATCCTTCGAACCAGTTCAC 59.964 41.667 10.90 0.00 39.46 3.18
3756 4100 4.204012 ACAAAATCCTTCGAACCAGTTCA 58.796 39.130 10.90 0.00 39.46 3.18
3757 4101 4.320275 GGACAAAATCCTTCGAACCAGTTC 60.320 45.833 0.00 0.23 45.22 3.01
3758 4102 3.568430 GGACAAAATCCTTCGAACCAGTT 59.432 43.478 0.00 0.00 45.22 3.16
3759 4103 3.146847 GGACAAAATCCTTCGAACCAGT 58.853 45.455 0.00 0.00 45.22 4.00
3760 4104 3.831715 GGACAAAATCCTTCGAACCAG 57.168 47.619 0.00 0.00 45.22 4.00
3778 4122 4.980805 GCACGGCAGTCAACGGGA 62.981 66.667 0.00 0.00 35.00 5.14
3791 4135 3.817274 CATGCATCATGGCGGCACG 62.817 63.158 16.34 6.13 43.74 5.34
3792 4136 2.027024 CATGCATCATGGCGGCAC 59.973 61.111 16.34 0.70 40.83 5.01
3793 4137 3.906879 GCATGCATCATGGCGGCA 61.907 61.111 16.34 16.34 41.64 5.69
3794 4138 3.220999 ATGCATGCATCATGGCGGC 62.221 57.895 27.46 0.00 41.64 6.53
3795 4139 1.372872 CATGCATGCATCATGGCGG 60.373 57.895 30.07 13.50 41.64 6.13
3796 4140 4.243383 CATGCATGCATCATGGCG 57.757 55.556 30.07 14.24 41.64 5.69
3799 4143 0.389025 ACAGCCATGCATGCATCATG 59.611 50.000 30.07 26.61 43.91 3.07
3800 4144 0.673985 GACAGCCATGCATGCATCAT 59.326 50.000 30.07 15.75 33.90 2.45
3801 4145 0.395173 AGACAGCCATGCATGCATCA 60.395 50.000 30.07 4.08 33.90 3.07
3802 4146 1.535896 CTAGACAGCCATGCATGCATC 59.464 52.381 30.07 19.63 33.90 3.91
3803 4147 1.133884 ACTAGACAGCCATGCATGCAT 60.134 47.619 27.46 27.46 37.08 3.96
3804 4148 0.253894 ACTAGACAGCCATGCATGCA 59.746 50.000 25.04 25.04 0.00 3.96
3805 4149 0.661552 CACTAGACAGCCATGCATGC 59.338 55.000 21.69 11.82 0.00 4.06
3806 4150 0.661552 GCACTAGACAGCCATGCATG 59.338 55.000 20.19 20.19 36.30 4.06
3807 4151 3.091318 GCACTAGACAGCCATGCAT 57.909 52.632 0.00 0.00 36.30 3.96
3808 4152 4.623814 GCACTAGACAGCCATGCA 57.376 55.556 0.00 0.00 36.30 3.96
3814 4158 0.461961 CTGGGTAGGCACTAGACAGC 59.538 60.000 0.00 0.00 44.14 4.40
3815 4159 2.145397 TCTGGGTAGGCACTAGACAG 57.855 55.000 0.00 0.00 44.14 3.51
3816 4160 2.667470 GATCTGGGTAGGCACTAGACA 58.333 52.381 0.00 0.00 44.14 3.41
3817 4161 1.609555 CGATCTGGGTAGGCACTAGAC 59.390 57.143 0.00 0.00 44.14 2.59
3818 4162 1.982660 CGATCTGGGTAGGCACTAGA 58.017 55.000 0.00 0.00 44.14 2.43
3819 4163 0.315568 GCGATCTGGGTAGGCACTAG 59.684 60.000 0.00 0.00 44.14 2.57
3820 4164 0.106167 AGCGATCTGGGTAGGCACTA 60.106 55.000 0.00 0.00 41.75 2.74
3821 4165 1.381872 AGCGATCTGGGTAGGCACT 60.382 57.895 0.00 0.00 46.37 4.40
3822 4166 1.227380 CAGCGATCTGGGTAGGCAC 60.227 63.158 0.00 0.00 36.68 5.01
3823 4167 1.676678 GACAGCGATCTGGGTAGGCA 61.677 60.000 0.00 0.00 44.54 4.75
3824 4168 1.068250 GACAGCGATCTGGGTAGGC 59.932 63.158 0.00 0.00 44.54 3.93
3825 4169 1.101635 TCGACAGCGATCTGGGTAGG 61.102 60.000 0.00 0.00 44.54 3.18
3826 4170 2.405143 TCGACAGCGATCTGGGTAG 58.595 57.895 0.00 0.00 44.54 3.18
3827 4171 4.649845 TCGACAGCGATCTGGGTA 57.350 55.556 0.00 0.00 44.54 3.69
3835 4179 0.387929 AGTTTCCTTGTCGACAGCGA 59.612 50.000 19.11 14.73 45.71 4.93
3836 4180 1.217882 AAGTTTCCTTGTCGACAGCG 58.782 50.000 19.11 13.49 39.35 5.18
3837 4181 2.854805 GCAAAGTTTCCTTGTCGACAGC 60.855 50.000 19.11 10.65 0.00 4.40
3838 4182 2.354510 TGCAAAGTTTCCTTGTCGACAG 59.645 45.455 19.11 12.53 0.00 3.51
3839 4183 2.360844 TGCAAAGTTTCCTTGTCGACA 58.639 42.857 15.76 15.76 0.00 4.35
3840 4184 3.003275 TCATGCAAAGTTTCCTTGTCGAC 59.997 43.478 9.11 9.11 0.00 4.20
3841 4185 3.210227 TCATGCAAAGTTTCCTTGTCGA 58.790 40.909 0.00 0.00 0.00 4.20
3842 4186 3.250762 TCTCATGCAAAGTTTCCTTGTCG 59.749 43.478 0.00 0.00 0.00 4.35
3843 4187 4.836125 TCTCATGCAAAGTTTCCTTGTC 57.164 40.909 0.00 0.00 0.00 3.18
3844 4188 4.828939 TCATCTCATGCAAAGTTTCCTTGT 59.171 37.500 0.00 0.00 0.00 3.16
3845 4189 5.159209 GTCATCTCATGCAAAGTTTCCTTG 58.841 41.667 0.00 0.00 0.00 3.61
3846 4190 4.083110 CGTCATCTCATGCAAAGTTTCCTT 60.083 41.667 0.00 0.00 0.00 3.36
3847 4191 3.438087 CGTCATCTCATGCAAAGTTTCCT 59.562 43.478 0.00 0.00 0.00 3.36
3848 4192 3.751621 CGTCATCTCATGCAAAGTTTCC 58.248 45.455 0.00 0.00 0.00 3.13
3849 4193 3.166657 GCGTCATCTCATGCAAAGTTTC 58.833 45.455 0.00 0.00 0.00 2.78
3850 4194 2.413239 CGCGTCATCTCATGCAAAGTTT 60.413 45.455 0.00 0.00 0.00 2.66
3851 4195 1.129251 CGCGTCATCTCATGCAAAGTT 59.871 47.619 0.00 0.00 0.00 2.66
3852 4196 0.723414 CGCGTCATCTCATGCAAAGT 59.277 50.000 0.00 0.00 0.00 2.66
3853 4197 0.723414 ACGCGTCATCTCATGCAAAG 59.277 50.000 5.58 0.00 0.00 2.77
3854 4198 0.721154 GACGCGTCATCTCATGCAAA 59.279 50.000 33.09 0.00 0.00 3.68
3855 4199 1.083806 GGACGCGTCATCTCATGCAA 61.084 55.000 37.26 0.00 0.00 4.08
3856 4200 1.519234 GGACGCGTCATCTCATGCA 60.519 57.895 37.26 0.00 0.00 3.96
3857 4201 2.240500 GGGACGCGTCATCTCATGC 61.241 63.158 37.26 18.89 0.00 4.06
3858 4202 1.592669 GGGGACGCGTCATCTCATG 60.593 63.158 37.26 0.00 0.00 3.07
3859 4203 1.758514 AGGGGACGCGTCATCTCAT 60.759 57.895 37.26 19.50 0.00 2.90
3860 4204 2.362503 AGGGGACGCGTCATCTCA 60.363 61.111 37.26 0.00 0.00 3.27
3861 4205 2.105128 CAGGGGACGCGTCATCTC 59.895 66.667 37.26 22.77 0.00 2.75
3862 4206 4.148825 GCAGGGGACGCGTCATCT 62.149 66.667 37.26 29.11 0.00 2.90
3869 4213 3.423154 CAAAGTCGCAGGGGACGC 61.423 66.667 10.32 0.00 41.81 5.19
3870 4214 3.423154 GCAAAGTCGCAGGGGACG 61.423 66.667 10.32 0.00 41.81 4.79
3871 4215 3.056328 GGCAAAGTCGCAGGGGAC 61.056 66.667 8.29 8.29 37.19 4.46
3872 4216 4.697756 CGGCAAAGTCGCAGGGGA 62.698 66.667 0.00 0.00 0.00 4.81
3873 4217 3.599285 TACGGCAAAGTCGCAGGGG 62.599 63.158 0.00 0.00 32.11 4.79
3874 4218 2.047655 TACGGCAAAGTCGCAGGG 60.048 61.111 0.00 0.00 32.11 4.45
3875 4219 0.108992 TACTACGGCAAAGTCGCAGG 60.109 55.000 0.00 0.00 32.11 4.85
3876 4220 1.852895 GATACTACGGCAAAGTCGCAG 59.147 52.381 0.00 0.00 32.11 5.18
3877 4221 1.475280 AGATACTACGGCAAAGTCGCA 59.525 47.619 0.00 0.00 32.11 5.10
3878 4222 2.117910 GAGATACTACGGCAAAGTCGC 58.882 52.381 0.00 0.00 32.11 5.19
3879 4223 3.312973 AGAGAGATACTACGGCAAAGTCG 59.687 47.826 0.00 0.00 36.42 4.18
3880 4224 4.096682 ACAGAGAGATACTACGGCAAAGTC 59.903 45.833 0.00 0.00 0.00 3.01
3881 4225 4.017808 ACAGAGAGATACTACGGCAAAGT 58.982 43.478 0.00 0.00 0.00 2.66
3882 4226 4.640789 ACAGAGAGATACTACGGCAAAG 57.359 45.455 0.00 0.00 0.00 2.77
3883 4227 6.096423 ACAATACAGAGAGATACTACGGCAAA 59.904 38.462 0.00 0.00 0.00 3.68
3884 4228 5.593095 ACAATACAGAGAGATACTACGGCAA 59.407 40.000 0.00 0.00 0.00 4.52
3885 4229 5.008712 CACAATACAGAGAGATACTACGGCA 59.991 44.000 0.00 0.00 0.00 5.69
3886 4230 5.453648 CACAATACAGAGAGATACTACGGC 58.546 45.833 0.00 0.00 0.00 5.68
3887 4231 5.239744 AGCACAATACAGAGAGATACTACGG 59.760 44.000 0.00 0.00 0.00 4.02
3888 4232 6.307031 AGCACAATACAGAGAGATACTACG 57.693 41.667 0.00 0.00 0.00 3.51
3889 4233 7.174253 AGCTAGCACAATACAGAGAGATACTAC 59.826 40.741 18.83 0.00 0.00 2.73
3890 4234 7.227873 AGCTAGCACAATACAGAGAGATACTA 58.772 38.462 18.83 0.00 0.00 1.82
3891 4235 6.068010 AGCTAGCACAATACAGAGAGATACT 58.932 40.000 18.83 0.00 0.00 2.12
3892 4236 6.325919 AGCTAGCACAATACAGAGAGATAC 57.674 41.667 18.83 0.00 0.00 2.24
3893 4237 5.475220 GGAGCTAGCACAATACAGAGAGATA 59.525 44.000 18.83 0.00 0.00 1.98
3894 4238 4.280677 GGAGCTAGCACAATACAGAGAGAT 59.719 45.833 18.83 0.00 0.00 2.75
3895 4239 3.634448 GGAGCTAGCACAATACAGAGAGA 59.366 47.826 18.83 0.00 0.00 3.10
3896 4240 3.382865 TGGAGCTAGCACAATACAGAGAG 59.617 47.826 18.83 0.00 0.00 3.20
3897 4241 3.131223 GTGGAGCTAGCACAATACAGAGA 59.869 47.826 18.83 0.00 0.00 3.10
3898 4242 3.118992 TGTGGAGCTAGCACAATACAGAG 60.119 47.826 18.83 0.00 0.00 3.35
3899 4243 2.831526 TGTGGAGCTAGCACAATACAGA 59.168 45.455 18.83 0.00 0.00 3.41
3900 4244 3.118992 TCTGTGGAGCTAGCACAATACAG 60.119 47.826 24.03 24.03 36.53 2.74
3901 4245 2.831526 TCTGTGGAGCTAGCACAATACA 59.168 45.455 18.83 14.98 0.00 2.29
3902 4246 3.190874 GTCTGTGGAGCTAGCACAATAC 58.809 50.000 18.83 11.32 0.00 1.89
3903 4247 2.168521 GGTCTGTGGAGCTAGCACAATA 59.831 50.000 18.83 1.06 37.05 1.90
3904 4248 1.065854 GGTCTGTGGAGCTAGCACAAT 60.066 52.381 18.83 0.00 37.05 2.71
3905 4249 0.321671 GGTCTGTGGAGCTAGCACAA 59.678 55.000 18.83 0.00 37.05 3.33
3906 4250 0.831711 TGGTCTGTGGAGCTAGCACA 60.832 55.000 18.83 12.81 40.29 4.57
3907 4251 0.390472 GTGGTCTGTGGAGCTAGCAC 60.390 60.000 18.83 11.05 40.29 4.40
3908 4252 0.831711 TGTGGTCTGTGGAGCTAGCA 60.832 55.000 18.83 0.00 40.29 3.49
3909 4253 0.108424 CTGTGGTCTGTGGAGCTAGC 60.108 60.000 6.62 6.62 40.29 3.42
3910 4254 0.108424 GCTGTGGTCTGTGGAGCTAG 60.108 60.000 0.00 0.00 40.29 3.42
3911 4255 1.877576 CGCTGTGGTCTGTGGAGCTA 61.878 60.000 0.00 0.00 40.29 3.32
3912 4256 2.746359 GCTGTGGTCTGTGGAGCT 59.254 61.111 0.00 0.00 40.29 4.09
3913 4257 2.740055 CGCTGTGGTCTGTGGAGC 60.740 66.667 0.00 0.00 40.08 4.70
3914 4258 1.665916 CACGCTGTGGTCTGTGGAG 60.666 63.158 1.40 0.00 0.00 3.86
3915 4259 2.421314 CACGCTGTGGTCTGTGGA 59.579 61.111 1.40 0.00 0.00 4.02
3916 4260 2.108976 ACACGCTGTGGTCTGTGG 59.891 61.111 12.18 0.00 37.94 4.17
3917 4261 3.323000 CACACGCTGTGGTCTGTG 58.677 61.111 12.18 0.00 44.27 3.66
3929 4273 2.710971 CTCTTCTGACGCGCACACG 61.711 63.158 5.73 1.80 44.07 4.49
3930 4274 3.004734 GCTCTTCTGACGCGCACAC 62.005 63.158 5.73 0.00 0.00 3.82
3931 4275 2.734723 GCTCTTCTGACGCGCACA 60.735 61.111 5.73 6.17 0.00 4.57
3932 4276 2.724708 CTGCTCTTCTGACGCGCAC 61.725 63.158 5.73 0.41 0.00 5.34
3933 4277 2.431430 CTGCTCTTCTGACGCGCA 60.431 61.111 5.73 4.25 0.00 6.09
3934 4278 2.431601 ACTGCTCTTCTGACGCGC 60.432 61.111 5.73 0.00 0.00 6.86
3935 4279 2.148982 CGACTGCTCTTCTGACGCG 61.149 63.158 3.53 3.53 0.00 6.01
3936 4280 1.803519 CCGACTGCTCTTCTGACGC 60.804 63.158 0.00 0.00 32.57 5.19
3937 4281 0.039074 AACCGACTGCTCTTCTGACG 60.039 55.000 0.00 0.00 0.00 4.35
3938 4282 2.062519 GAAACCGACTGCTCTTCTGAC 58.937 52.381 0.00 0.00 0.00 3.51
3939 4283 1.000955 GGAAACCGACTGCTCTTCTGA 59.999 52.381 0.00 0.00 0.00 3.27
3940 4284 1.001406 AGGAAACCGACTGCTCTTCTG 59.999 52.381 0.00 0.00 0.00 3.02
3941 4285 1.343069 AGGAAACCGACTGCTCTTCT 58.657 50.000 0.00 0.00 0.00 2.85
3942 4286 2.070028 GAAGGAAACCGACTGCTCTTC 58.930 52.381 0.00 0.00 0.00 2.87
3943 4287 1.694696 AGAAGGAAACCGACTGCTCTT 59.305 47.619 0.00 0.00 0.00 2.85
3944 4288 1.273886 GAGAAGGAAACCGACTGCTCT 59.726 52.381 0.00 0.00 36.61 4.09
3945 4289 1.715993 GAGAAGGAAACCGACTGCTC 58.284 55.000 0.00 0.00 32.53 4.26
3946 4290 0.038159 CGAGAAGGAAACCGACTGCT 60.038 55.000 0.00 0.00 0.00 4.24
3947 4291 0.319641 ACGAGAAGGAAACCGACTGC 60.320 55.000 0.00 0.00 0.00 4.40
3948 4292 2.150397 AACGAGAAGGAAACCGACTG 57.850 50.000 0.00 0.00 0.00 3.51
3949 4293 2.904697 AAACGAGAAGGAAACCGACT 57.095 45.000 0.00 0.00 0.00 4.18
3950 4294 3.614588 CAAAAACGAGAAGGAAACCGAC 58.385 45.455 0.00 0.00 0.00 4.79
3951 4295 2.032426 GCAAAAACGAGAAGGAAACCGA 59.968 45.455 0.00 0.00 0.00 4.69
3952 4296 2.032924 AGCAAAAACGAGAAGGAAACCG 59.967 45.455 0.00 0.00 0.00 4.44
3953 4297 3.629058 GAGCAAAAACGAGAAGGAAACC 58.371 45.455 0.00 0.00 0.00 3.27
3954 4298 3.289076 CGAGCAAAAACGAGAAGGAAAC 58.711 45.455 0.00 0.00 0.00 2.78
3955 4299 2.286772 GCGAGCAAAAACGAGAAGGAAA 60.287 45.455 0.00 0.00 0.00 3.13
3956 4300 1.263217 GCGAGCAAAAACGAGAAGGAA 59.737 47.619 0.00 0.00 0.00 3.36
3957 4301 0.865769 GCGAGCAAAAACGAGAAGGA 59.134 50.000 0.00 0.00 0.00 3.36
3958 4302 0.451135 CGCGAGCAAAAACGAGAAGG 60.451 55.000 0.00 0.00 0.00 3.46
3959 4303 0.451135 CCGCGAGCAAAAACGAGAAG 60.451 55.000 8.23 0.00 0.00 2.85
3960 4304 0.876777 TCCGCGAGCAAAAACGAGAA 60.877 50.000 8.23 0.00 0.00 2.87
3961 4305 1.300311 TCCGCGAGCAAAAACGAGA 60.300 52.632 8.23 0.00 0.00 4.04
3962 4306 1.154654 GTCCGCGAGCAAAAACGAG 60.155 57.895 8.23 0.00 0.00 4.18
3963 4307 2.932905 GTCCGCGAGCAAAAACGA 59.067 55.556 8.23 0.00 0.00 3.85
3964 4308 2.496794 CGTCCGCGAGCAAAAACG 60.497 61.111 8.23 1.73 41.33 3.60
3965 4309 2.932905 TCGTCCGCGAGCAAAAAC 59.067 55.556 8.23 0.00 42.81 2.43
3974 4318 3.774959 ATTGCCTAGCTCGTCCGCG 62.775 63.158 0.00 0.00 39.92 6.46
3975 4319 1.521681 AATTGCCTAGCTCGTCCGC 60.522 57.895 0.00 0.00 0.00 5.54
3976 4320 0.179111 TCAATTGCCTAGCTCGTCCG 60.179 55.000 0.00 0.00 0.00 4.79
3977 4321 1.291132 GTCAATTGCCTAGCTCGTCC 58.709 55.000 0.00 0.00 0.00 4.79
3978 4322 2.010145 TGTCAATTGCCTAGCTCGTC 57.990 50.000 0.00 0.00 0.00 4.20
3979 4323 2.472695 TTGTCAATTGCCTAGCTCGT 57.527 45.000 0.00 0.00 0.00 4.18
3980 4324 4.346129 GAATTTGTCAATTGCCTAGCTCG 58.654 43.478 0.00 0.00 32.35 5.03
3981 4325 4.676546 GGAATTTGTCAATTGCCTAGCTC 58.323 43.478 0.00 0.00 35.26 4.09
3982 4326 3.129287 CGGAATTTGTCAATTGCCTAGCT 59.871 43.478 0.00 0.00 37.41 3.32
3983 4327 3.128589 TCGGAATTTGTCAATTGCCTAGC 59.871 43.478 0.00 0.00 37.41 3.42
3984 4328 4.635765 TCTCGGAATTTGTCAATTGCCTAG 59.364 41.667 0.00 2.31 37.41 3.02
3985 4329 4.584874 TCTCGGAATTTGTCAATTGCCTA 58.415 39.130 0.00 0.00 37.41 3.93
3986 4330 3.420893 TCTCGGAATTTGTCAATTGCCT 58.579 40.909 0.00 0.00 37.41 4.75
3987 4331 3.428045 CCTCTCGGAATTTGTCAATTGCC 60.428 47.826 0.00 0.00 37.41 4.52
3988 4332 3.191371 ACCTCTCGGAATTTGTCAATTGC 59.809 43.478 0.00 0.00 37.36 3.56
3989 4333 5.376854 AACCTCTCGGAATTTGTCAATTG 57.623 39.130 0.00 0.00 32.35 2.32
3990 4334 6.405278 AAAACCTCTCGGAATTTGTCAATT 57.595 33.333 0.00 0.00 35.12 2.32
3991 4335 5.334879 CGAAAACCTCTCGGAATTTGTCAAT 60.335 40.000 0.00 0.00 32.62 2.57
3992 4336 4.024387 CGAAAACCTCTCGGAATTTGTCAA 60.024 41.667 0.00 0.00 32.62 3.18
3993 4337 3.496884 CGAAAACCTCTCGGAATTTGTCA 59.503 43.478 0.00 0.00 32.62 3.58
3994 4338 3.497262 ACGAAAACCTCTCGGAATTTGTC 59.503 43.478 0.00 0.00 40.64 3.18
3995 4339 3.473625 ACGAAAACCTCTCGGAATTTGT 58.526 40.909 0.00 0.00 40.64 2.83
3996 4340 3.120304 GGACGAAAACCTCTCGGAATTTG 60.120 47.826 0.00 0.00 40.64 2.32
3997 4341 3.072211 GGACGAAAACCTCTCGGAATTT 58.928 45.455 0.00 0.00 40.64 1.82
3998 4342 2.038033 TGGACGAAAACCTCTCGGAATT 59.962 45.455 0.00 0.00 40.64 2.17
3999 4343 1.621814 TGGACGAAAACCTCTCGGAAT 59.378 47.619 0.00 0.00 40.64 3.01
4000 4344 1.042229 TGGACGAAAACCTCTCGGAA 58.958 50.000 0.00 0.00 40.64 4.30
4001 4345 1.042229 TTGGACGAAAACCTCTCGGA 58.958 50.000 0.00 0.00 40.64 4.55
4002 4346 1.145803 GTTGGACGAAAACCTCTCGG 58.854 55.000 0.00 0.00 40.64 4.63
4003 4347 0.782384 CGTTGGACGAAAACCTCTCG 59.218 55.000 0.00 0.00 46.05 4.04
4004 4348 0.511653 GCGTTGGACGAAAACCTCTC 59.488 55.000 4.46 0.00 46.05 3.20
4005 4349 0.883370 GGCGTTGGACGAAAACCTCT 60.883 55.000 4.46 0.00 46.05 3.69
4006 4350 1.161563 TGGCGTTGGACGAAAACCTC 61.162 55.000 4.46 0.00 46.05 3.85
4007 4351 1.153127 TGGCGTTGGACGAAAACCT 60.153 52.632 4.46 0.00 46.05 3.50
4008 4352 1.009335 GTGGCGTTGGACGAAAACC 60.009 57.895 4.46 0.00 46.05 3.27
4009 4353 0.316689 CAGTGGCGTTGGACGAAAAC 60.317 55.000 4.46 0.00 46.05 2.43
4010 4354 2.018544 CAGTGGCGTTGGACGAAAA 58.981 52.632 4.46 0.00 46.05 2.29
4011 4355 2.539338 GCAGTGGCGTTGGACGAAA 61.539 57.895 4.46 0.00 46.05 3.46
4012 4356 2.970324 GCAGTGGCGTTGGACGAA 60.970 61.111 4.46 0.00 46.05 3.85
4013 4357 4.228567 TGCAGTGGCGTTGGACGA 62.229 61.111 4.46 0.00 46.05 4.20
4014 4358 3.716006 CTGCAGTGGCGTTGGACG 61.716 66.667 5.25 0.00 45.35 4.79
4015 4359 2.725203 TACCTGCAGTGGCGTTGGAC 62.725 60.000 13.81 0.00 45.35 4.02
4016 4360 2.449031 CTACCTGCAGTGGCGTTGGA 62.449 60.000 13.81 0.00 45.35 3.53
4017 4361 2.031919 TACCTGCAGTGGCGTTGG 59.968 61.111 13.81 0.00 45.35 3.77
4018 4362 1.005037 TCTACCTGCAGTGGCGTTG 60.005 57.895 13.81 4.54 45.35 4.10
4019 4363 1.293498 CTCTACCTGCAGTGGCGTT 59.707 57.895 13.81 0.00 45.35 4.84
4020 4364 2.650116 CCTCTACCTGCAGTGGCGT 61.650 63.158 13.81 5.75 45.35 5.68
4021 4365 1.320344 TACCTCTACCTGCAGTGGCG 61.320 60.000 13.81 0.00 45.35 5.69
4022 4366 0.461961 CTACCTCTACCTGCAGTGGC 59.538 60.000 13.81 0.00 41.68 5.01
4023 4367 2.145397 TCTACCTCTACCTGCAGTGG 57.855 55.000 13.81 8.91 35.68 4.00
4024 4368 3.291584 TCATCTACCTCTACCTGCAGTG 58.708 50.000 13.81 6.81 0.00 3.66
4025 4369 3.671740 TCATCTACCTCTACCTGCAGT 57.328 47.619 13.81 3.45 0.00 4.40
4026 4370 4.704540 CCTATCATCTACCTCTACCTGCAG 59.295 50.000 6.78 6.78 0.00 4.41
4027 4371 4.106502 ACCTATCATCTACCTCTACCTGCA 59.893 45.833 0.00 0.00 0.00 4.41
4028 4372 4.668636 ACCTATCATCTACCTCTACCTGC 58.331 47.826 0.00 0.00 0.00 4.85
4029 4373 4.938832 CGACCTATCATCTACCTCTACCTG 59.061 50.000 0.00 0.00 0.00 4.00
4030 4374 4.019141 CCGACCTATCATCTACCTCTACCT 60.019 50.000 0.00 0.00 0.00 3.08
4031 4375 4.019501 TCCGACCTATCATCTACCTCTACC 60.020 50.000 0.00 0.00 0.00 3.18
4032 4376 5.163281 TCCGACCTATCATCTACCTCTAC 57.837 47.826 0.00 0.00 0.00 2.59
4033 4377 7.127493 ACATATCCGACCTATCATCTACCTCTA 59.873 40.741 0.00 0.00 0.00 2.43
4034 4378 4.938575 ATCCGACCTATCATCTACCTCT 57.061 45.455 0.00 0.00 0.00 3.69
4035 4379 6.123651 ACATATCCGACCTATCATCTACCTC 58.876 44.000 0.00 0.00 0.00 3.85
4036 4380 6.080969 ACATATCCGACCTATCATCTACCT 57.919 41.667 0.00 0.00 0.00 3.08
4037 4381 7.055378 ACTACATATCCGACCTATCATCTACC 58.945 42.308 0.00 0.00 0.00 3.18
4038 4382 8.508883 AACTACATATCCGACCTATCATCTAC 57.491 38.462 0.00 0.00 0.00 2.59
4039 4383 9.833917 CTAACTACATATCCGACCTATCATCTA 57.166 37.037 0.00 0.00 0.00 1.98
4040 4384 7.776030 CCTAACTACATATCCGACCTATCATCT 59.224 40.741 0.00 0.00 0.00 2.90
4041 4385 7.468906 GCCTAACTACATATCCGACCTATCATC 60.469 44.444 0.00 0.00 0.00 2.92
4042 4386 6.321690 GCCTAACTACATATCCGACCTATCAT 59.678 42.308 0.00 0.00 0.00 2.45
4043 4387 5.651139 GCCTAACTACATATCCGACCTATCA 59.349 44.000 0.00 0.00 0.00 2.15
4044 4388 5.651139 TGCCTAACTACATATCCGACCTATC 59.349 44.000 0.00 0.00 0.00 2.08
4045 4389 5.577100 TGCCTAACTACATATCCGACCTAT 58.423 41.667 0.00 0.00 0.00 2.57
4046 4390 4.989277 TGCCTAACTACATATCCGACCTA 58.011 43.478 0.00 0.00 0.00 3.08
4047 4391 3.827302 CTGCCTAACTACATATCCGACCT 59.173 47.826 0.00 0.00 0.00 3.85
4048 4392 3.056749 CCTGCCTAACTACATATCCGACC 60.057 52.174 0.00 0.00 0.00 4.79
4049 4393 3.573110 ACCTGCCTAACTACATATCCGAC 59.427 47.826 0.00 0.00 0.00 4.79
4050 4394 3.825014 GACCTGCCTAACTACATATCCGA 59.175 47.826 0.00 0.00 0.00 4.55
4051 4395 3.827302 AGACCTGCCTAACTACATATCCG 59.173 47.826 0.00 0.00 0.00 4.18
4052 4396 5.810080 AAGACCTGCCTAACTACATATCC 57.190 43.478 0.00 0.00 0.00 2.59
4053 4397 7.527568 AGTAAGACCTGCCTAACTACATATC 57.472 40.000 0.00 0.00 0.00 1.63
4054 4398 9.603189 AATAGTAAGACCTGCCTAACTACATAT 57.397 33.333 0.00 0.00 0.00 1.78
4055 4399 9.430399 AAATAGTAAGACCTGCCTAACTACATA 57.570 33.333 0.00 0.00 0.00 2.29
4056 4400 7.916077 AATAGTAAGACCTGCCTAACTACAT 57.084 36.000 0.00 0.00 0.00 2.29
4057 4401 7.729124 AAATAGTAAGACCTGCCTAACTACA 57.271 36.000 0.00 0.00 0.00 2.74
4058 4402 9.526713 GTAAAATAGTAAGACCTGCCTAACTAC 57.473 37.037 0.00 0.00 0.00 2.73
4059 4403 9.258629 TGTAAAATAGTAAGACCTGCCTAACTA 57.741 33.333 0.00 0.00 0.00 2.24
4060 4404 8.142485 TGTAAAATAGTAAGACCTGCCTAACT 57.858 34.615 0.00 0.00 0.00 2.24
4061 4405 8.039538 ACTGTAAAATAGTAAGACCTGCCTAAC 58.960 37.037 0.00 0.00 0.00 2.34
4062 4406 8.142485 ACTGTAAAATAGTAAGACCTGCCTAA 57.858 34.615 0.00 0.00 0.00 2.69
4063 4407 7.398047 TGACTGTAAAATAGTAAGACCTGCCTA 59.602 37.037 0.00 0.00 0.00 3.93
4064 4408 6.212791 TGACTGTAAAATAGTAAGACCTGCCT 59.787 38.462 0.00 0.00 0.00 4.75
4065 4409 6.403878 TGACTGTAAAATAGTAAGACCTGCC 58.596 40.000 0.00 0.00 0.00 4.85
4066 4410 7.063544 CACTGACTGTAAAATAGTAAGACCTGC 59.936 40.741 0.00 0.00 32.06 4.85
4067 4411 8.088981 ACACTGACTGTAAAATAGTAAGACCTG 58.911 37.037 0.00 0.00 32.06 4.00
4068 4412 8.088981 CACACTGACTGTAAAATAGTAAGACCT 58.911 37.037 0.00 0.00 32.06 3.85
4069 4413 7.871463 ACACACTGACTGTAAAATAGTAAGACC 59.129 37.037 0.00 0.00 32.06 3.85
4070 4414 8.700644 CACACACTGACTGTAAAATAGTAAGAC 58.299 37.037 0.00 0.00 32.06 3.01
4071 4415 7.384115 GCACACACTGACTGTAAAATAGTAAGA 59.616 37.037 0.00 0.00 32.06 2.10
4072 4416 7.170828 TGCACACACTGACTGTAAAATAGTAAG 59.829 37.037 0.00 0.00 33.58 2.34
4073 4417 6.987404 TGCACACACTGACTGTAAAATAGTAA 59.013 34.615 0.00 0.00 0.00 2.24
4074 4418 6.517605 TGCACACACTGACTGTAAAATAGTA 58.482 36.000 0.00 0.00 0.00 1.82
4075 4419 5.364778 TGCACACACTGACTGTAAAATAGT 58.635 37.500 0.00 0.00 0.00 2.12
4076 4420 5.922739 TGCACACACTGACTGTAAAATAG 57.077 39.130 0.00 0.00 0.00 1.73
4077 4421 6.685527 TTTGCACACACTGACTGTAAAATA 57.314 33.333 0.00 0.00 0.00 1.40
4078 4422 5.574891 TTTGCACACACTGACTGTAAAAT 57.425 34.783 0.00 0.00 0.00 1.82
4079 4423 5.124617 TGATTTGCACACACTGACTGTAAAA 59.875 36.000 0.00 0.00 0.00 1.52
4080 4424 4.637977 TGATTTGCACACACTGACTGTAAA 59.362 37.500 0.00 0.00 0.00 2.01
4081 4425 4.035091 GTGATTTGCACACACTGACTGTAA 59.965 41.667 9.04 0.00 46.91 2.41
4082 4426 3.559655 GTGATTTGCACACACTGACTGTA 59.440 43.478 9.04 0.00 46.91 2.74
4083 4427 2.355756 GTGATTTGCACACACTGACTGT 59.644 45.455 9.04 0.00 46.91 3.55
4084 4428 2.990941 GTGATTTGCACACACTGACTG 58.009 47.619 9.04 0.00 46.91 3.51
4102 4446 4.915085 GGTTTATGTTTTGTCACATCGGTG 59.085 41.667 0.00 0.00 46.66 4.94
4103 4447 4.580995 TGGTTTATGTTTTGTCACATCGGT 59.419 37.500 0.00 0.00 38.40 4.69
4104 4448 5.114785 TGGTTTATGTTTTGTCACATCGG 57.885 39.130 0.00 0.00 38.40 4.18
4105 4449 6.473778 TGTTTGGTTTATGTTTTGTCACATCG 59.526 34.615 0.00 0.00 38.40 3.84
4106 4450 7.491048 AGTGTTTGGTTTATGTTTTGTCACATC 59.509 33.333 0.00 0.00 38.40 3.06
4107 4451 7.327214 AGTGTTTGGTTTATGTTTTGTCACAT 58.673 30.769 0.00 0.00 40.61 3.21
4108 4452 6.692486 AGTGTTTGGTTTATGTTTTGTCACA 58.308 32.000 0.00 0.00 0.00 3.58
4109 4453 7.589574 AAGTGTTTGGTTTATGTTTTGTCAC 57.410 32.000 0.00 0.00 0.00 3.67
4110 4454 9.706691 TTTAAGTGTTTGGTTTATGTTTTGTCA 57.293 25.926 0.00 0.00 0.00 3.58
4136 4480 6.954102 AGTTGCTCTTAGGGTCCATTATTTTT 59.046 34.615 0.00 0.00 0.00 1.94
4137 4481 6.494059 AGTTGCTCTTAGGGTCCATTATTTT 58.506 36.000 0.00 0.00 0.00 1.82
4138 4482 6.069381 AGAGTTGCTCTTAGGGTCCATTATTT 60.069 38.462 0.00 0.00 37.60 1.40
4139 4483 5.430089 AGAGTTGCTCTTAGGGTCCATTATT 59.570 40.000 0.00 0.00 37.60 1.40
4140 4484 4.971924 AGAGTTGCTCTTAGGGTCCATTAT 59.028 41.667 0.00 0.00 37.60 1.28
4141 4485 4.362677 AGAGTTGCTCTTAGGGTCCATTA 58.637 43.478 0.00 0.00 37.60 1.90
4142 4486 3.185455 AGAGTTGCTCTTAGGGTCCATT 58.815 45.455 0.00 0.00 37.60 3.16
4143 4487 2.839228 AGAGTTGCTCTTAGGGTCCAT 58.161 47.619 0.00 0.00 37.60 3.41
4144 4488 2.327325 AGAGTTGCTCTTAGGGTCCA 57.673 50.000 0.00 0.00 37.60 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.