Multiple sequence alignment - TraesCS5A01G408900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G408900 chr5A 100.000 4409 0 0 1 4409 598865239 598860831 0.000000e+00 8142
1 TraesCS5A01G408900 chr5A 98.371 614 8 2 3781 4392 23608371 23608984 0.000000e+00 1077
2 TraesCS5A01G408900 chr5D 92.571 3850 170 39 1 3789 480365099 480361305 0.000000e+00 5419
3 TraesCS5A01G408900 chr5B 94.831 3366 112 22 449 3789 588513704 588510376 0.000000e+00 5195
4 TraesCS5A01G408900 chr6A 99.171 603 5 0 3789 4391 410902109 410901507 0.000000e+00 1086
5 TraesCS5A01G408900 chr6A 81.127 355 32 19 429 771 29402089 29401758 7.320000e-63 252
6 TraesCS5A01G408900 chr3A 98.691 611 6 2 3781 4389 91016403 91017013 0.000000e+00 1083
7 TraesCS5A01G408900 chr2A 99.005 603 6 0 3789 4391 624462828 624462226 0.000000e+00 1081
8 TraesCS5A01G408900 chr2A 98.841 604 7 0 3789 4392 19253922 19253319 0.000000e+00 1077
9 TraesCS5A01G408900 chr1D 98.532 613 7 2 3781 4391 223523967 223524579 0.000000e+00 1081
10 TraesCS5A01G408900 chr1D 98.841 604 7 0 3789 4392 94051253 94050650 0.000000e+00 1077
11 TraesCS5A01G408900 chr1A 99.005 603 6 0 3789 4391 396446288 396445686 0.000000e+00 1081
12 TraesCS5A01G408900 chr6D 98.525 610 5 3 3789 4396 153191370 153190763 0.000000e+00 1074
13 TraesCS5A01G408900 chr7B 84.229 279 17 16 497 771 116070940 116070685 3.410000e-61 246
14 TraesCS5A01G408900 chr3B 83.513 279 19 17 497 771 711740306 711740561 7.370000e-58 235
15 TraesCS5A01G408900 chr4D 80.226 354 35 19 429 770 435252609 435252279 2.650000e-57 233
16 TraesCS5A01G408900 chr4D 79.263 217 18 15 497 709 361189402 361189209 4.630000e-25 126
17 TraesCS5A01G408900 chr6B 83.154 279 20 16 497 771 720150977 720151232 3.430000e-56 230
18 TraesCS5A01G408900 chr7A 81.362 279 25 16 497 771 440950648 440950393 7.480000e-48 202
19 TraesCS5A01G408900 chr3D 81.437 167 20 6 429 584 23497972 23497806 4.630000e-25 126
20 TraesCS5A01G408900 chr2B 80.347 173 23 5 423 584 169268874 169269046 2.150000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G408900 chr5A 598860831 598865239 4408 True 8142 8142 100.000 1 4409 1 chr5A.!!$R1 4408
1 TraesCS5A01G408900 chr5A 23608371 23608984 613 False 1077 1077 98.371 3781 4392 1 chr5A.!!$F1 611
2 TraesCS5A01G408900 chr5D 480361305 480365099 3794 True 5419 5419 92.571 1 3789 1 chr5D.!!$R1 3788
3 TraesCS5A01G408900 chr5B 588510376 588513704 3328 True 5195 5195 94.831 449 3789 1 chr5B.!!$R1 3340
4 TraesCS5A01G408900 chr6A 410901507 410902109 602 True 1086 1086 99.171 3789 4391 1 chr6A.!!$R2 602
5 TraesCS5A01G408900 chr3A 91016403 91017013 610 False 1083 1083 98.691 3781 4389 1 chr3A.!!$F1 608
6 TraesCS5A01G408900 chr2A 624462226 624462828 602 True 1081 1081 99.005 3789 4391 1 chr2A.!!$R2 602
7 TraesCS5A01G408900 chr2A 19253319 19253922 603 True 1077 1077 98.841 3789 4392 1 chr2A.!!$R1 603
8 TraesCS5A01G408900 chr1D 223523967 223524579 612 False 1081 1081 98.532 3781 4391 1 chr1D.!!$F1 610
9 TraesCS5A01G408900 chr1D 94050650 94051253 603 True 1077 1077 98.841 3789 4392 1 chr1D.!!$R1 603
10 TraesCS5A01G408900 chr1A 396445686 396446288 602 True 1081 1081 99.005 3789 4391 1 chr1A.!!$R1 602
11 TraesCS5A01G408900 chr6D 153190763 153191370 607 True 1074 1074 98.525 3789 4396 1 chr6D.!!$R1 607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
41 42 0.248289 CCAAATCCCAAGCAGCAAGG 59.752 55.0 0.00 0.00 0.00 3.61 F
942 981 0.535553 TCGGTTTGGGGAAAAGTCGG 60.536 55.0 0.00 0.00 0.00 4.79 F
1855 1920 0.250513 GTTCTTCTCCCGGATGCTGT 59.749 55.0 0.73 0.00 0.00 4.40 F
2211 2276 0.999228 CTGCGATGATCGTCGGCTAC 60.999 60.0 32.30 19.12 42.81 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1650 1715 0.321564 CCGGCATCCTCTCAAACACA 60.322 55.000 0.0 0.0 0.00 3.72 R
1924 1989 0.322366 TTTCCGATGCTCACCATGCA 60.322 50.000 0.0 0.0 44.95 3.96 R
2964 3029 1.677552 GTCCTTCCTCCGCTTCCAA 59.322 57.895 0.0 0.0 0.00 3.53 R
3444 3517 1.786579 GCAAGAATGAACCAACAACGC 59.213 47.619 0.0 0.0 0.00 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 0.248289 CCAAATCCCAAGCAGCAAGG 59.752 55.000 0.00 0.00 0.00 3.61
180 181 7.834681 ACGAGAAAGGATCATATATGGTAGCTA 59.165 37.037 12.78 0.00 0.00 3.32
181 182 8.855110 CGAGAAAGGATCATATATGGTAGCTAT 58.145 37.037 12.78 0.00 0.00 2.97
212 214 6.706270 GTGATAATAATCATCTTGTCACGGGT 59.294 38.462 0.00 0.00 43.87 5.28
278 280 5.106830 CGGGTTCTACATTTCCACTACAAAC 60.107 44.000 0.00 0.00 0.00 2.93
296 298 1.843368 ACCCACAATGATTCTGGCTG 58.157 50.000 0.00 0.00 0.00 4.85
304 306 5.297527 CACAATGATTCTGGCTGCTAATACA 59.702 40.000 0.00 0.00 0.00 2.29
305 307 5.887598 ACAATGATTCTGGCTGCTAATACAA 59.112 36.000 0.00 0.00 0.00 2.41
306 308 6.183360 ACAATGATTCTGGCTGCTAATACAAC 60.183 38.462 0.00 0.00 0.00 3.32
307 309 5.102953 TGATTCTGGCTGCTAATACAACT 57.897 39.130 0.00 0.00 0.00 3.16
310 312 5.677319 TTCTGGCTGCTAATACAACTAGT 57.323 39.130 0.00 0.00 0.00 2.57
311 313 6.785337 TTCTGGCTGCTAATACAACTAGTA 57.215 37.500 0.00 0.00 37.06 1.82
312 314 6.145338 TCTGGCTGCTAATACAACTAGTAC 57.855 41.667 0.00 0.00 35.05 2.73
313 315 5.892119 TCTGGCTGCTAATACAACTAGTACT 59.108 40.000 0.00 0.00 35.05 2.73
314 316 7.058525 TCTGGCTGCTAATACAACTAGTACTA 58.941 38.462 1.89 1.89 35.05 1.82
354 372 9.807649 GAGTAGCAATGAACATTGGAAATTATT 57.192 29.630 23.05 0.00 46.14 1.40
377 395 5.865085 TGGAAATTAACACTGAGTGCTACT 58.135 37.500 13.37 0.00 36.98 2.57
378 396 6.999950 TGGAAATTAACACTGAGTGCTACTA 58.000 36.000 13.37 0.00 36.98 1.82
379 397 7.097192 TGGAAATTAACACTGAGTGCTACTAG 58.903 38.462 13.37 0.00 36.98 2.57
380 398 7.097834 GGAAATTAACACTGAGTGCTACTAGT 58.902 38.462 13.37 0.00 36.98 2.57
401 419 1.665948 CCTCCTAGTCCCAGCCCCTA 61.666 65.000 0.00 0.00 0.00 3.53
454 472 3.314635 AGAAGAAAACTTGAGCAGCACAG 59.685 43.478 0.00 0.00 0.00 3.66
465 483 2.667536 AGCACAGTCTTGCAGGCG 60.668 61.111 8.92 0.00 45.62 5.52
586 604 3.913573 CGCACCGTATCTGCACGC 61.914 66.667 0.00 0.00 40.59 5.34
587 605 2.813474 GCACCGTATCTGCACGCA 60.813 61.111 0.00 0.00 40.59 5.24
588 606 3.081133 CACCGTATCTGCACGCAC 58.919 61.111 0.00 0.00 40.59 5.34
589 607 2.506217 ACCGTATCTGCACGCACG 60.506 61.111 2.97 2.97 40.59 5.34
657 690 4.539726 CAATCAATCAATGGAGGGAGGAA 58.460 43.478 0.00 0.00 0.00 3.36
819 853 2.289979 ATCTCCCCCTCCCCCTCT 60.290 66.667 0.00 0.00 0.00 3.69
882 916 4.244802 CGGCCGAGAGCGAGAGAC 62.245 72.222 24.07 0.00 45.17 3.36
939 978 2.429250 CAGTTTCGGTTTGGGGAAAAGT 59.571 45.455 0.00 0.00 34.26 2.66
942 981 0.535553 TCGGTTTGGGGAAAAGTCGG 60.536 55.000 0.00 0.00 0.00 4.79
1458 1523 1.303317 GGCGTTCCTGGACATGGTT 60.303 57.895 0.00 0.00 0.00 3.67
1465 1530 1.767036 CTGGACATGGTTGGGGACA 59.233 57.895 0.00 0.00 39.83 4.02
1494 1559 2.106131 ACGCAGTTCACGCTCACA 59.894 55.556 0.00 0.00 37.78 3.58
1572 1637 4.735132 TTCGCCGTCAAGCTCGGG 62.735 66.667 13.61 4.83 46.90 5.14
1845 1910 0.398318 AGGCACTGTGGTTCTTCTCC 59.602 55.000 10.21 0.00 37.18 3.71
1855 1920 0.250513 GTTCTTCTCCCGGATGCTGT 59.749 55.000 0.73 0.00 0.00 4.40
1924 1989 1.827789 TCAGCTTGCGCCAACCTTT 60.828 52.632 4.18 0.00 36.60 3.11
1966 2031 3.304257 GCAGGTGCATGCATACATCTTAC 60.304 47.826 25.64 7.15 45.77 2.34
2168 2233 5.913137 AGGGAGATCTTCGATATCATGAC 57.087 43.478 0.00 0.00 0.00 3.06
2211 2276 0.999228 CTGCGATGATCGTCGGCTAC 60.999 60.000 32.30 19.12 42.81 3.58
2382 2447 1.407851 GCCATCAGATCACTGCAGGAA 60.408 52.381 19.93 5.63 43.17 3.36
2571 2636 2.813754 CCTGTTTGAAGAAATGCTCCGA 59.186 45.455 0.00 0.00 0.00 4.55
2709 2774 1.415659 GTGCCTGAGATGAGCCACTAT 59.584 52.381 0.00 0.00 0.00 2.12
2770 2835 2.099263 TCCGAAGCTCAGGAGTTTATCG 59.901 50.000 6.06 0.16 31.89 2.92
2790 2855 2.361610 CAAATGCCCGTGGAGCCT 60.362 61.111 0.00 0.00 0.00 4.58
2832 2897 4.154347 CTCTCGGCCTGCAGGGTC 62.154 72.222 33.46 17.96 37.43 4.46
2928 2993 4.094684 GCGCTCTGCAACGTCTAT 57.905 55.556 0.00 0.00 45.45 1.98
3441 3514 2.359376 TCCCAAGGAAGGAGGAATGA 57.641 50.000 0.00 0.00 0.00 2.57
3444 3517 3.053395 TCCCAAGGAAGGAGGAATGAATG 60.053 47.826 0.00 0.00 0.00 2.67
3445 3518 2.692041 CCAAGGAAGGAGGAATGAATGC 59.308 50.000 0.00 0.00 0.00 3.56
3446 3519 2.338577 AGGAAGGAGGAATGAATGCG 57.661 50.000 0.00 0.00 0.00 4.73
3546 3622 1.000843 CGGTATTCCAGATGGATCGCA 59.999 52.381 1.61 0.00 44.98 5.10
3646 3722 8.749026 AAATCTCTGCTTGATGACTTTCATAT 57.251 30.769 0.00 0.00 37.20 1.78
3679 3757 4.461081 AGATCTCTAGGCTTAGTTATGGCG 59.539 45.833 2.43 0.00 0.00 5.69
3728 3807 9.822185 AGGGATGCTAAATGAATACAAAAATTC 57.178 29.630 0.00 0.00 36.57 2.17
3747 3826 2.778299 TCAAACCCATTTGTCTCCTCG 58.222 47.619 0.09 0.00 44.76 4.63
3867 3949 2.945668 GACAAGAGAGTGCCACAAAAGT 59.054 45.455 0.00 0.00 0.00 2.66
4220 4302 2.946990 GGAGGAGTCCGTTAAGAGAGAG 59.053 54.545 2.76 0.00 31.37 3.20
4261 4343 3.713764 ACCAAAGAGCTAGCTATGGACAT 59.286 43.478 33.71 18.73 32.26 3.06
4392 4474 6.199154 TGTTGTTGTTGTTGTTGTTGTTGTAG 59.801 34.615 0.00 0.00 0.00 2.74
4394 4476 5.221263 TGTTGTTGTTGTTGTTGTTGTAGGT 60.221 36.000 0.00 0.00 0.00 3.08
4395 4477 5.455056 TGTTGTTGTTGTTGTTGTAGGTT 57.545 34.783 0.00 0.00 0.00 3.50
4396 4478 5.462405 TGTTGTTGTTGTTGTTGTAGGTTC 58.538 37.500 0.00 0.00 0.00 3.62
4398 4480 5.554822 TGTTGTTGTTGTTGTAGGTTCTC 57.445 39.130 0.00 0.00 0.00 2.87
4399 4481 5.004448 TGTTGTTGTTGTTGTAGGTTCTCA 58.996 37.500 0.00 0.00 0.00 3.27
4400 4482 5.650266 TGTTGTTGTTGTTGTAGGTTCTCAT 59.350 36.000 0.00 0.00 0.00 2.90
4401 4483 5.749596 TGTTGTTGTTGTAGGTTCTCATG 57.250 39.130 0.00 0.00 0.00 3.07
4402 4484 5.432645 TGTTGTTGTTGTAGGTTCTCATGA 58.567 37.500 0.00 0.00 0.00 3.07
4403 4485 5.883115 TGTTGTTGTTGTAGGTTCTCATGAA 59.117 36.000 0.00 0.00 0.00 2.57
4404 4486 6.545666 TGTTGTTGTTGTAGGTTCTCATGAAT 59.454 34.615 0.00 0.00 34.40 2.57
4405 4487 7.717436 TGTTGTTGTTGTAGGTTCTCATGAATA 59.283 33.333 0.00 0.00 34.40 1.75
4406 4488 7.905604 TGTTGTTGTAGGTTCTCATGAATAG 57.094 36.000 0.00 0.00 34.40 1.73
4407 4489 6.878923 TGTTGTTGTAGGTTCTCATGAATAGG 59.121 38.462 0.00 0.00 34.40 2.57
4408 4490 5.428253 TGTTGTAGGTTCTCATGAATAGGC 58.572 41.667 0.00 0.00 34.40 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 5.119125 GCGCTCACTGCTTTTTATCAAAAAT 59.881 36.000 0.00 0.00 39.43 1.82
278 280 0.458669 GCAGCCAGAATCATTGTGGG 59.541 55.000 15.22 0.86 43.87 4.61
296 298 8.127954 GTGTCCTGTAGTACTAGTTGTATTAGC 58.872 40.741 1.87 0.00 33.23 3.09
304 306 4.404640 TGCAGTGTCCTGTAGTACTAGTT 58.595 43.478 1.87 0.00 41.02 2.24
305 307 4.030314 TGCAGTGTCCTGTAGTACTAGT 57.970 45.455 1.87 0.00 41.02 2.57
306 308 4.700692 TCTTGCAGTGTCCTGTAGTACTAG 59.299 45.833 1.87 0.00 41.02 2.57
307 309 4.659115 TCTTGCAGTGTCCTGTAGTACTA 58.341 43.478 0.00 0.00 41.02 1.82
310 312 3.497332 ACTCTTGCAGTGTCCTGTAGTA 58.503 45.455 0.00 0.00 41.02 1.82
311 313 2.320781 ACTCTTGCAGTGTCCTGTAGT 58.679 47.619 0.00 0.00 41.02 2.73
312 314 3.674682 GCTACTCTTGCAGTGTCCTGTAG 60.675 52.174 0.00 0.00 41.02 2.74
313 315 2.231478 GCTACTCTTGCAGTGTCCTGTA 59.769 50.000 0.00 0.00 41.02 2.74
314 316 1.001406 GCTACTCTTGCAGTGTCCTGT 59.999 52.381 0.00 0.00 41.02 4.00
327 345 7.472334 AATTTCCAATGTTCATTGCTACTCT 57.528 32.000 17.04 1.09 0.00 3.24
354 372 5.865085 AGTAGCACTCAGTGTTAATTTCCA 58.135 37.500 6.68 0.00 35.75 3.53
367 385 5.293319 CTAGGAGGTACTAGTAGCACTCA 57.707 47.826 28.68 15.49 41.55 3.41
377 395 1.498145 GGCTGGGACTAGGAGGTACTA 59.502 57.143 0.00 0.00 41.55 1.82
379 397 0.759812 GGGCTGGGACTAGGAGGTAC 60.760 65.000 0.00 0.00 0.00 3.34
380 398 1.624753 GGGCTGGGACTAGGAGGTA 59.375 63.158 0.00 0.00 0.00 3.08
437 455 2.648059 AGACTGTGCTGCTCAAGTTTT 58.352 42.857 5.85 0.00 0.00 2.43
454 472 0.109412 AGTACGTACGCCTGCAAGAC 60.109 55.000 19.49 0.97 34.07 3.01
465 483 0.526954 CGGCCACATCCAGTACGTAC 60.527 60.000 18.10 18.10 0.00 3.67
586 604 3.414700 GACTGACTTGGGCGCGTG 61.415 66.667 8.43 0.00 0.00 5.34
587 605 3.865929 CTGACTGACTTGGGCGCGT 62.866 63.158 8.43 0.00 0.00 6.01
588 606 3.114616 CTGACTGACTTGGGCGCG 61.115 66.667 0.00 0.00 0.00 6.86
589 607 1.569479 GAACTGACTGACTTGGGCGC 61.569 60.000 0.00 0.00 0.00 6.53
597 615 1.292541 GACGGGGGAACTGACTGAC 59.707 63.158 0.00 0.00 0.00 3.51
657 690 3.943381 ACTCGGTTTCCTCTTTCGTTTTT 59.057 39.130 0.00 0.00 0.00 1.94
875 909 0.799393 TCTTGTCGCTCTGTCTCTCG 59.201 55.000 0.00 0.00 0.00 4.04
882 916 2.154854 TTTGTCCTCTTGTCGCTCTG 57.845 50.000 0.00 0.00 0.00 3.35
1348 1413 2.485122 GGGCATTTCCGCGAACAG 59.515 61.111 8.23 0.00 34.94 3.16
1494 1559 2.300787 GCACGACGAGAGCACGTTT 61.301 57.895 0.00 0.00 46.52 3.60
1650 1715 0.321564 CCGGCATCCTCTCAAACACA 60.322 55.000 0.00 0.00 0.00 3.72
1773 1838 1.080093 GACCGCGTTCCATGAGACA 60.080 57.895 4.92 0.00 0.00 3.41
1845 1910 1.091771 AAGAATCGCACAGCATCCGG 61.092 55.000 0.00 0.00 0.00 5.14
1855 1920 2.358957 CACCATGGAAGAAGAATCGCA 58.641 47.619 21.47 0.00 0.00 5.10
1924 1989 0.322366 TTTCCGATGCTCACCATGCA 60.322 50.000 0.00 0.00 44.95 3.96
2168 2233 2.158959 GCGACGACATCTCGGTTGG 61.159 63.158 0.00 0.00 44.80 3.77
2211 2276 2.092211 GTCGTTGTAACCATTCTGCTCG 59.908 50.000 0.00 0.00 0.00 5.03
2382 2447 1.078848 GCTGACGGAGCTGGATTGT 60.079 57.895 0.00 0.00 45.21 2.71
2481 2546 1.514228 CGTCCATGTCACCGTCTCG 60.514 63.158 0.00 0.00 0.00 4.04
2709 2774 4.002506 AGGTCGACCATGCACGCA 62.003 61.111 35.00 0.00 38.89 5.24
2832 2897 4.003788 AGGTCCGCGTCCTTGTGG 62.004 66.667 13.18 0.00 40.98 4.17
2964 3029 1.677552 GTCCTTCCTCCGCTTCCAA 59.322 57.895 0.00 0.00 0.00 3.53
3204 3269 2.202797 GCGATGGCGAGCTTCTCA 60.203 61.111 0.00 0.00 40.82 3.27
3300 3365 2.315925 TGGAGATGAACTTGATCGCC 57.684 50.000 4.38 4.38 39.53 5.54
3411 3476 3.615155 CTTCCTTGGGAATCAGAAGGTC 58.385 50.000 8.73 0.00 41.23 3.85
3417 3482 2.200081 TCCTCCTTCCTTGGGAATCAG 58.800 52.381 0.00 0.00 41.23 2.90
3441 3514 4.050553 CAAGAATGAACCAACAACGCATT 58.949 39.130 0.00 0.00 32.36 3.56
3444 3517 1.786579 GCAAGAATGAACCAACAACGC 59.213 47.619 0.00 0.00 0.00 4.84
3445 3518 3.044986 CTGCAAGAATGAACCAACAACG 58.955 45.455 0.00 0.00 34.07 4.10
3446 3519 4.305989 TCTGCAAGAATGAACCAACAAC 57.694 40.909 0.00 0.00 42.31 3.32
3546 3622 2.920076 TTTGGGCCAGGCGACTTGTT 62.920 55.000 6.23 0.00 40.21 2.83
3603 3679 4.455877 AGATTTCAAATCCCACTTGACGAC 59.544 41.667 6.50 0.00 32.61 4.34
3646 3722 4.730966 AGCCTAGAGATCTATTTGTCCGA 58.269 43.478 0.00 0.00 0.00 4.55
3747 3826 9.530129 CTCTGTAATAATTTTGAAACTCACGTC 57.470 33.333 0.00 0.00 0.00 4.34
3867 3949 4.753107 CGTCCTGTAGAACTTGCCTTTTAA 59.247 41.667 0.00 0.00 0.00 1.52
4220 4302 3.118261 TGGTGATACTCCAATCCTTCAGC 60.118 47.826 0.00 0.00 33.47 4.26
4261 4343 2.594303 CAAGCTTCCACGCACCCA 60.594 61.111 0.00 0.00 0.00 4.51
4355 4437 5.789521 ACAACAACAACAAAGCCTTTAGTT 58.210 33.333 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.